Query psy13014
Match_columns 229
No_of_seqs 258 out of 2079
Neff 10.2
Searched_HMMs 29240
Date Fri Aug 16 17:10:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pl2_A Hypothetical conserved 99.9 3.5E-26 1.2E-30 174.4 15.5 175 5-209 27-212 (217)
2 2pl2_A Hypothetical conserved 99.9 9E-26 3.1E-30 172.1 12.6 175 14-218 2-188 (217)
3 3vtx_A MAMA; tetratricopeptide 99.9 2E-25 6.7E-30 165.2 14.0 173 15-216 3-176 (184)
4 4gyw_A UDP-N-acetylglucosamine 99.9 2.4E-25 8.3E-30 196.4 13.7 175 12-215 4-179 (723)
5 2h6f_A Protein farnesyltransfe 99.9 5.2E-25 1.8E-29 181.4 11.4 182 8-218 88-277 (382)
6 3vtx_A MAMA; tetratricopeptide 99.9 8.5E-24 2.9E-28 156.4 14.9 157 5-191 27-183 (184)
7 4i17_A Hypothetical protein; T 99.9 4.4E-24 1.5E-28 163.2 13.2 177 13-218 3-217 (228)
8 2h6f_A Protein farnesyltransfe 99.9 2.4E-24 8.1E-29 177.4 10.1 181 5-214 119-308 (382)
9 4gco_A Protein STI-1; structur 99.9 4.5E-23 1.5E-27 144.0 14.9 118 63-191 8-125 (126)
10 4ga2_A E3 SUMO-protein ligase 99.9 1.1E-23 3.8E-28 151.5 10.8 141 23-191 3-144 (150)
11 2q7f_A YRRB protein; TPR, prot 99.9 5E-23 1.7E-27 157.8 14.6 186 4-218 44-230 (243)
12 1w3b_A UDP-N-acetylglucosamine 99.9 5E-23 1.7E-27 169.1 13.3 200 5-217 157-375 (388)
13 1w3b_A UDP-N-acetylglucosamine 99.9 8.7E-23 3E-27 167.6 14.2 197 5-214 89-304 (388)
14 3uq3_A Heat shock protein STI1 99.9 1.1E-22 3.7E-27 157.0 13.0 189 5-211 27-237 (258)
15 3hym_B Cell division cycle pro 99.9 2.1E-22 7E-27 160.9 14.2 183 6-217 114-306 (330)
16 4eqf_A PEX5-related protein; a 99.9 7.9E-23 2.7E-27 166.4 11.8 199 5-216 87-316 (365)
17 4abn_A Tetratricopeptide repea 99.9 1.3E-22 4.3E-27 171.8 13.2 175 5-209 125-319 (474)
18 4i17_A Hypothetical protein; T 99.9 7.5E-22 2.6E-26 150.8 15.8 159 5-191 29-224 (228)
19 4eqf_A PEX5-related protein; a 99.9 7.9E-23 2.7E-27 166.5 9.5 190 5-217 49-283 (365)
20 4abn_A Tetratricopeptide repea 99.9 1.8E-22 6.1E-27 170.9 11.9 181 6-216 91-293 (474)
21 2ho1_A Type 4 fimbrial biogene 99.9 4.6E-22 1.6E-26 153.7 13.3 182 6-216 60-244 (252)
22 1fch_A Peroxisomal targeting s 99.9 9.2E-22 3.1E-26 159.8 15.1 185 6-214 87-318 (368)
23 3qky_A Outer membrane assembly 99.9 4.5E-22 1.5E-26 155.3 12.5 182 9-216 7-230 (261)
24 2vq2_A PILW, putative fimbrial 99.9 2.9E-21 1E-25 146.0 15.5 172 12-212 3-178 (225)
25 3hym_B Cell division cycle pro 99.9 7.6E-22 2.6E-26 157.6 12.4 181 7-216 80-271 (330)
26 3ieg_A DNAJ homolog subfamily 99.9 1.8E-21 6.3E-26 156.8 14.0 183 5-216 25-223 (359)
27 2vq2_A PILW, putative fimbrial 99.9 1.7E-21 6E-26 147.2 12.8 184 5-217 30-218 (225)
28 4gyw_A UDP-N-acetylglucosamine 99.9 8.9E-22 3E-26 173.7 12.5 144 63-218 4-148 (723)
29 3ieg_A DNAJ homolog subfamily 99.9 4.4E-21 1.5E-25 154.6 14.5 185 5-218 142-343 (359)
30 1fch_A Peroxisomal targeting s 99.9 7.3E-21 2.5E-25 154.5 15.6 192 5-209 120-357 (368)
31 3gyz_A Chaperone protein IPGC; 99.9 5.3E-21 1.8E-25 137.6 12.5 109 62-181 30-138 (151)
32 2ho1_A Type 4 fimbrial biogene 99.9 1E-20 3.4E-25 146.1 15.0 177 10-215 29-209 (252)
33 2y4t_A DNAJ homolog subfamily 99.9 7.3E-21 2.5E-25 158.6 15.0 184 5-217 165-365 (450)
34 3as5_A MAMA; tetratricopeptide 99.9 5E-21 1.7E-25 140.2 12.2 173 15-216 6-179 (186)
35 3urz_A Uncharacterized protein 99.9 2.6E-20 9E-25 140.8 16.3 169 16-214 3-190 (208)
36 2pzi_A Probable serine/threoni 99.9 1.3E-21 4.3E-26 172.4 10.1 170 11-209 427-603 (681)
37 3cv0_A Peroxisome targeting si 99.9 1.6E-20 5.5E-25 149.7 15.5 200 6-218 78-323 (327)
38 3u4t_A TPR repeat-containing p 99.9 2.3E-21 8E-26 151.2 10.4 181 5-211 25-209 (272)
39 4ga2_A E3 SUMO-protein ligase 99.9 1.1E-22 3.9E-27 146.2 2.6 134 73-218 2-137 (150)
40 3qky_A Outer membrane assembly 99.8 3.3E-20 1.1E-24 144.6 16.2 177 5-204 37-254 (261)
41 2y4t_A DNAJ homolog subfamily 99.8 1.4E-20 4.8E-25 156.9 15.0 184 3-215 12-211 (450)
42 3uq3_A Heat shock protein STI1 99.8 5.8E-20 2E-24 141.6 16.8 175 5-191 60-257 (258)
43 2q7f_A YRRB protein; TPR, prot 99.8 7.5E-20 2.6E-24 140.1 16.4 159 5-191 79-237 (243)
44 3mkr_A Coatomer subunit epsilo 99.8 2.2E-20 7.7E-25 148.4 13.5 179 6-218 88-272 (291)
45 2xpi_A Anaphase-promoting comp 99.8 2.8E-20 9.7E-25 160.4 14.8 200 6-218 362-587 (597)
46 3cv0_A Peroxisome targeting si 99.8 8.1E-21 2.8E-25 151.4 10.4 186 5-214 43-273 (327)
47 4gco_A Protein STI-1; structur 99.8 4.5E-20 1.5E-24 128.7 12.8 122 8-157 4-125 (126)
48 2vgx_A Chaperone SYCD; alterna 99.8 4.4E-20 1.5E-24 132.3 12.5 117 62-189 15-131 (148)
49 2yhc_A BAMD, UPF0169 lipoprote 99.8 5.1E-20 1.8E-24 140.8 13.1 187 16-219 3-222 (225)
50 2pzi_A Probable serine/threoni 99.8 4.6E-21 1.6E-25 168.9 7.9 182 11-217 388-570 (681)
51 1xnf_A Lipoprotein NLPI; TPR, 99.8 6.6E-20 2.3E-24 142.9 13.6 180 6-215 28-249 (275)
52 3as5_A MAMA; tetratricopeptide 99.8 2.1E-19 7.2E-24 131.5 15.4 152 5-184 30-181 (186)
53 3upv_A Heat shock protein STI1 99.8 1.6E-19 5.4E-24 125.3 13.2 115 66-191 2-122 (126)
54 1p5q_A FKBP52, FK506-binding p 99.8 5.1E-21 1.7E-25 155.1 6.4 175 9-209 95-292 (336)
55 3fp2_A TPR repeat-containing p 99.8 4.2E-20 1.4E-24 157.2 11.7 184 5-218 224-415 (537)
56 2gw1_A Mitochondrial precursor 99.8 1.4E-20 4.8E-25 159.0 8.3 183 6-217 293-485 (514)
57 2fbn_A 70 kDa peptidylprolyl i 99.8 1.5E-19 5.1E-24 135.3 13.0 168 18-209 5-184 (198)
58 3u4t_A TPR repeat-containing p 99.8 5.6E-21 1.9E-25 149.0 5.3 184 6-220 60-260 (272)
59 3gyz_A Chaperone protein IPGC; 99.8 2.4E-19 8.1E-24 128.9 13.1 117 3-147 22-138 (151)
60 3rkv_A Putative peptidylprolyl 99.8 2.5E-19 8.6E-24 129.9 12.7 126 65-202 8-152 (162)
61 3fp2_A TPR repeat-containing p 99.8 4.2E-20 1.4E-24 157.2 9.6 182 6-216 299-497 (537)
62 2xpi_A Anaphase-promoting comp 99.8 2.3E-19 7.8E-24 154.7 14.4 198 5-215 327-550 (597)
63 2vsy_A XCC0866; transferase, g 99.8 8.2E-19 2.8E-23 151.3 17.1 157 4-188 10-169 (568)
64 3urz_A Uncharacterized protein 99.8 1.4E-19 4.8E-24 136.8 10.7 156 5-190 26-199 (208)
65 4gcn_A Protein STI-1; structur 99.8 5.7E-19 2E-23 123.2 12.8 111 63-185 3-120 (127)
66 2hr2_A Hypothetical protein; a 99.8 1.1E-19 3.6E-24 130.3 9.1 121 65-191 8-146 (159)
67 2r5s_A Uncharacterized protein 99.8 5.7E-20 1.9E-24 135.2 7.9 167 13-209 2-171 (176)
68 2xcb_A PCRH, regulatory protei 99.8 5.9E-19 2E-23 125.3 12.9 119 62-191 12-130 (142)
69 2ond_A Cleavage stimulation fa 99.8 2.1E-19 7.3E-24 143.6 10.7 188 5-214 38-274 (308)
70 2ond_A Cleavage stimulation fa 99.8 4.7E-19 1.6E-23 141.6 12.5 167 5-183 86-277 (308)
71 2gw1_A Mitochondrial precursor 99.8 7.8E-20 2.7E-24 154.4 8.0 181 6-216 260-450 (514)
72 3qou_A Protein YBBN; thioredox 99.8 2.6E-19 8.9E-24 141.9 10.5 169 12-209 112-282 (287)
73 3sz7_A HSC70 cochaperone (SGT) 99.8 1.1E-18 3.6E-23 126.8 12.7 126 63-199 6-132 (164)
74 2vsy_A XCC0866; transferase, g 99.8 5E-19 1.7E-23 152.7 12.1 156 32-215 3-162 (568)
75 3edt_B KLC 2, kinesin light ch 99.8 1.2E-18 3.9E-23 135.8 11.6 176 13-209 39-279 (283)
76 4g1t_A Interferon-induced prot 99.8 1.5E-18 5E-23 145.7 13.0 183 6-217 236-466 (472)
77 2vyi_A SGTA protein; chaperone 99.8 1.2E-17 4.3E-22 115.2 15.2 124 62-197 6-129 (131)
78 1qqe_A Vesicular transport pro 99.8 3.8E-18 1.3E-22 135.4 14.1 179 20-216 40-234 (292)
79 1xnf_A Lipoprotein NLPI; TPR, 99.8 1E-17 3.5E-22 130.4 15.8 158 32-214 19-177 (275)
80 1qqe_A Vesicular transport pro 99.8 1.5E-18 5.2E-23 137.7 11.0 193 5-214 59-273 (292)
81 1dce_A Protein (RAB geranylger 99.8 3.6E-18 1.2E-22 147.2 13.4 181 5-214 51-271 (567)
82 2fo7_A Synthetic consensus TPR 99.8 5.1E-17 1.8E-21 112.4 16.8 134 18-179 2-135 (136)
83 2xcb_A PCRH, regulatory protei 99.8 3.4E-18 1.2E-22 121.3 10.8 133 3-163 4-136 (142)
84 2vgx_A Chaperone SYCD; alterna 99.8 3.5E-18 1.2E-22 122.4 10.9 123 3-153 7-129 (148)
85 3nf1_A KLC 1, kinesin light ch 99.8 2E-18 7E-23 136.5 10.6 184 12-213 64-310 (311)
86 1hh8_A P67PHOX, NCF-2, neutrop 99.8 1.1E-17 3.8E-22 125.9 14.1 138 16-184 5-158 (213)
87 1hxi_A PEX5, peroxisome target 99.8 1.1E-17 3.6E-22 115.7 12.6 103 69-182 18-120 (121)
88 1p5q_A FKBP52, FK506-binding p 99.8 1.4E-17 4.7E-22 134.9 15.3 159 5-176 135-294 (336)
89 1a17_A Serine/threonine protei 99.8 2.1E-17 7E-22 119.2 14.5 135 63-209 8-144 (166)
90 3dss_A Geranylgeranyl transfer 99.8 2.1E-17 7.2E-22 132.6 15.9 181 6-214 53-271 (331)
91 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 1.6E-18 5.4E-23 146.1 9.6 149 32-203 248-406 (457)
92 3dra_A Protein farnesyltransfe 99.8 1.6E-17 5.5E-22 132.4 14.6 172 6-206 56-244 (306)
93 2lni_A Stress-induced-phosphop 99.8 1.1E-17 3.6E-22 116.2 11.9 118 63-191 11-128 (133)
94 3q49_B STIP1 homology and U bo 99.8 7.7E-18 2.6E-22 118.0 11.1 117 64-191 5-126 (137)
95 4g1t_A Interferon-induced prot 99.8 3.7E-18 1.3E-22 143.2 11.1 207 5-216 160-407 (472)
96 3mkr_A Coatomer subunit epsilo 99.8 7.3E-18 2.5E-22 133.9 12.2 193 8-218 24-237 (291)
97 2if4_A ATFKBP42; FKBP-like, al 99.8 2.3E-18 7.9E-23 139.6 8.9 143 62-215 173-333 (338)
98 2fo7_A Synthetic consensus TPR 99.7 2.2E-17 7.5E-22 114.3 12.3 133 69-213 2-135 (136)
99 3nf1_A KLC 1, kinesin light ch 99.7 1.1E-17 3.6E-22 132.4 11.2 184 11-212 21-226 (311)
100 1elw_A TPR1-domain of HOP; HOP 99.7 8.4E-17 2.9E-21 109.0 14.2 114 67-191 3-116 (118)
101 1ouv_A Conserved hypothetical 99.7 8E-17 2.7E-21 126.0 15.0 177 13-209 2-213 (273)
102 2yhc_A BAMD, UPF0169 lipoprote 99.7 5.3E-17 1.8E-21 124.0 13.1 158 5-182 26-219 (225)
103 1ouv_A Conserved hypothetical 99.7 1.4E-16 4.7E-21 124.6 15.3 187 6-214 29-255 (273)
104 1hh8_A P67PHOX, NCF-2, neutrop 99.7 3.2E-17 1.1E-21 123.4 11.2 133 67-214 5-154 (213)
105 3ulq_A Response regulator aspa 99.7 4.2E-17 1.4E-21 133.8 12.8 175 19-211 105-294 (383)
106 1a17_A Serine/threonine protei 99.7 4.6E-16 1.6E-20 112.0 16.0 134 15-176 11-146 (166)
107 1wao_1 Serine/threonine protei 99.7 1.6E-17 5.4E-22 140.7 9.0 130 65-206 3-134 (477)
108 1na0_A Designed protein CTPR3; 99.7 4.9E-16 1.7E-20 106.2 14.9 114 67-191 8-121 (125)
109 2r5s_A Uncharacterized protein 99.7 3.5E-17 1.2E-21 120.2 9.3 142 5-175 28-172 (176)
110 1ihg_A Cyclophilin 40; ppiase 99.7 1.2E-16 4.2E-21 131.0 13.4 131 63-205 218-364 (370)
111 2e2e_A Formate-dependent nitri 99.7 8.8E-17 3E-21 117.8 11.2 134 28-189 21-157 (177)
112 3ulq_A Response regulator aspa 99.7 7.5E-17 2.6E-21 132.3 11.8 156 6-177 126-294 (383)
113 2c2l_A CHIP, carboxy terminus 99.7 5.4E-17 1.8E-21 128.2 10.4 140 67-217 3-171 (281)
114 2xev_A YBGF; tetratricopeptide 99.7 2.6E-16 9E-21 109.0 12.2 115 69-191 3-120 (129)
115 3upv_A Heat shock protein STI1 99.7 4.1E-16 1.4E-20 107.9 13.1 118 14-159 1-124 (126)
116 1elr_A TPR2A-domain of HOP; HO 99.7 2.7E-16 9.3E-21 108.5 12.1 119 66-197 2-127 (131)
117 2vyi_A SGTA protein; chaperone 99.7 3E-16 1E-20 108.1 11.7 126 10-163 5-130 (131)
118 4a1s_A PINS, partner of inscut 99.7 1.9E-17 6.4E-22 136.5 6.3 190 5-212 70-294 (411)
119 2c2l_A CHIP, carboxy terminus 99.7 5.3E-17 1.8E-21 128.2 8.4 184 14-227 1-227 (281)
120 3rjv_A Putative SEL1 repeat pr 99.7 1.6E-16 5.6E-21 120.3 10.7 168 6-209 9-195 (212)
121 2ooe_A Cleavage stimulation fa 99.7 8.6E-17 2.9E-21 137.6 10.3 181 5-214 260-458 (530)
122 3q15_A PSP28, response regulat 99.7 2.7E-16 9.1E-21 128.9 12.5 176 19-212 103-292 (378)
123 3qou_A Protein YBBN; thioredox 99.7 1.9E-16 6.5E-21 125.4 11.1 144 5-176 139-284 (287)
124 3sf4_A G-protein-signaling mod 99.7 4.5E-17 1.5E-21 133.4 7.3 190 5-212 31-258 (406)
125 1zu2_A Mitochondrial import re 99.7 2.4E-16 8.2E-21 112.7 10.0 102 79-191 13-135 (158)
126 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 5.4E-16 1.8E-20 130.6 13.8 152 5-169 256-407 (457)
127 2lni_A Stress-induced-phosphop 99.7 8.8E-16 3E-20 106.4 12.5 126 9-162 8-133 (133)
128 2e2e_A Formate-dependent nitri 99.7 5.4E-17 1.8E-21 119.0 6.6 127 78-216 20-150 (177)
129 3sz7_A HSC70 cochaperone (SGT) 99.7 5.9E-16 2E-20 112.2 12.0 121 11-159 5-125 (164)
130 2dba_A Smooth muscle cell asso 99.7 7.3E-16 2.5E-20 108.9 11.2 120 64-191 24-143 (148)
131 3q15_A PSP28, response regulat 99.7 7.5E-16 2.6E-20 126.2 12.7 149 14-178 138-292 (378)
132 3edt_B KLC 2, kinesin light ch 99.7 3.1E-16 1.1E-20 122.0 9.9 164 32-212 15-200 (283)
133 4a1s_A PINS, partner of inscut 99.7 1.1E-16 3.8E-21 131.8 7.8 189 6-212 149-374 (411)
134 3ro2_A PINS homolog, G-protein 99.7 1.4E-16 4.7E-21 126.7 7.9 190 5-212 27-254 (338)
135 3sf4_A G-protein-signaling mod 99.7 1.9E-16 6.6E-21 129.6 8.9 188 6-211 110-337 (406)
136 2kck_A TPR repeat; tetratricop 99.7 2.8E-16 9.5E-21 105.5 7.9 105 66-181 4-111 (112)
137 2ifu_A Gamma-SNAP; membrane fu 99.7 5.7E-16 1.9E-20 123.7 11.0 173 23-214 42-227 (307)
138 3q7a_A Farnesyltransferase alp 99.7 9.2E-16 3.1E-20 123.7 12.1 158 6-191 77-252 (349)
139 2fbn_A 70 kDa peptidylprolyl i 99.7 1.3E-15 4.3E-20 113.8 11.8 156 6-173 27-183 (198)
140 3rkv_A Putative peptidylprolyl 99.6 6.6E-15 2.3E-19 106.4 14.1 139 15-165 9-150 (162)
141 4gcn_A Protein STI-1; structur 99.6 1.7E-16 5.9E-21 110.5 5.3 101 106-213 7-115 (127)
142 3ro2_A PINS homolog, G-protein 99.6 4.6E-16 1.6E-20 123.6 8.3 178 17-212 123-334 (338)
143 1na0_A Designed protein CTPR3; 99.6 1.1E-14 3.6E-19 99.4 14.1 122 12-161 3-125 (125)
144 2if4_A ATFKBP42; FKBP-like, al 99.6 2.9E-16 9.9E-21 127.3 6.8 165 6-183 168-335 (338)
145 1hxi_A PEX5, peroxisome target 99.6 7.1E-16 2.4E-20 106.5 7.8 102 108-216 18-120 (121)
146 2hr2_A Hypothetical protein; a 99.6 3.7E-16 1.3E-20 111.9 6.0 107 107-220 11-141 (159)
147 3q49_B STIP1 homology and U bo 99.6 5E-15 1.7E-19 103.5 11.6 125 11-163 3-132 (137)
148 3k9i_A BH0479 protein; putativ 99.6 3.3E-16 1.1E-20 107.3 5.3 96 80-186 2-100 (117)
149 1wao_1 Serine/threonine protei 99.6 4E-17 1.4E-21 138.2 0.8 146 15-188 4-162 (477)
150 2qfc_A PLCR protein; TPR, HTH, 99.6 7.7E-15 2.6E-19 116.2 13.3 178 14-209 72-264 (293)
151 2ooe_A Cleavage stimulation fa 99.6 1.8E-15 6.1E-20 129.4 10.2 181 5-213 308-495 (530)
152 2dba_A Smooth muscle cell asso 99.6 1.4E-14 4.9E-19 102.1 13.1 126 6-159 17-145 (148)
153 3dss_A Geranylgeranyl transfer 99.6 8E-15 2.7E-19 117.7 12.4 179 6-212 97-306 (331)
154 1dce_A Protein (RAB geranylger 99.6 4.9E-15 1.7E-19 127.7 11.7 156 35-218 46-229 (567)
155 1elw_A TPR1-domain of HOP; HOP 99.6 4.6E-14 1.6E-18 95.3 14.1 115 16-158 3-117 (118)
156 3dra_A Protein farnesyltransfe 99.6 1.1E-14 3.6E-19 116.1 12.5 167 27-218 42-223 (306)
157 3q7a_A Farnesyltransferase alp 99.6 9.8E-15 3.3E-19 117.7 12.1 180 10-218 47-245 (349)
158 1ihg_A Cyclophilin 40; ppiase 99.6 1E-13 3.5E-18 113.6 17.6 141 17-169 223-363 (370)
159 3u3w_A Transcriptional activat 99.6 5.1E-15 1.7E-19 117.3 9.5 169 23-209 81-264 (293)
160 4f3v_A ESX-1 secretion system 99.6 3.2E-16 1.1E-20 122.7 2.4 172 5-188 28-248 (282)
161 2ifu_A Gamma-SNAP; membrane fu 99.6 2.9E-14 1E-18 113.7 12.6 158 6-182 59-229 (307)
162 3ro3_A PINS homolog, G-protein 99.5 3E-13 1E-17 96.1 15.3 146 17-179 9-161 (164)
163 3k9i_A BH0479 protein; putativ 99.5 4.7E-14 1.6E-18 96.4 10.1 95 32-153 4-101 (117)
164 2kck_A TPR repeat; tetratricop 99.5 3.4E-14 1.2E-18 95.1 8.8 108 12-147 1-111 (112)
165 4f3v_A ESX-1 secretion system 99.5 2.1E-14 7.2E-19 112.4 8.5 133 68-213 102-240 (282)
166 2l6j_A TPR repeat-containing p 99.5 1.2E-14 4E-19 97.8 5.9 95 107-208 4-104 (111)
167 2qfc_A PLCR protein; TPR, HTH, 99.5 1.1E-13 3.9E-18 109.5 12.4 154 6-177 98-267 (293)
168 3gw4_A Uncharacterized protein 99.5 3.2E-13 1.1E-17 100.3 14.2 150 12-178 20-178 (203)
169 2l6j_A TPR repeat-containing p 99.5 8.1E-14 2.8E-18 93.6 9.8 68 146-214 3-71 (111)
170 3u3w_A Transcriptional activat 99.5 8.2E-14 2.8E-18 110.3 11.2 155 6-177 98-267 (293)
171 1zu2_A Mitochondrial import re 99.5 5.8E-14 2E-18 100.3 8.4 89 32-147 16-125 (158)
172 3gw4_A Uncharacterized protein 99.5 3.1E-14 1.1E-18 105.8 6.1 155 32-209 6-174 (203)
173 2kat_A Uncharacterized protein 99.5 3.1E-13 1.1E-17 91.8 10.4 95 86-191 3-99 (115)
174 1elr_A TPR2A-domain of HOP; HO 99.5 5.5E-13 1.9E-17 91.6 11.1 125 14-162 1-127 (131)
175 3ro3_A PINS homolog, G-protein 99.5 9.2E-14 3.1E-18 98.8 7.2 140 63-209 4-156 (164)
176 1na3_A Designed protein CTPR2; 99.5 9.7E-13 3.3E-17 85.0 11.3 85 66-161 7-91 (91)
177 2xev_A YBGF; tetratricopeptide 99.5 5.7E-13 1.9E-17 91.9 10.6 119 18-161 3-124 (129)
178 3rjv_A Putative SEL1 repeat pr 99.5 1.9E-13 6.5E-18 103.3 8.7 127 66-209 16-156 (212)
179 3mv2_B Coatomer subunit epsilo 99.5 6E-13 2.1E-17 105.5 11.8 180 6-218 89-290 (310)
180 2xm6_A Protein corresponding t 99.4 1.5E-12 5.2E-17 110.2 13.9 129 66-212 289-434 (490)
181 2kc7_A BFR218_protein; tetratr 99.4 4.6E-13 1.6E-17 88.3 7.1 91 72-181 4-95 (99)
182 2xm6_A Protein corresponding t 99.4 4.6E-12 1.6E-16 107.2 15.0 143 13-191 35-193 (490)
183 1hz4_A MALT regulatory protein 99.4 4.4E-12 1.5E-16 103.2 14.1 174 17-209 14-201 (373)
184 3e4b_A ALGK; tetratricopeptide 99.4 1E-12 3.5E-17 110.4 10.2 172 16-209 175-385 (452)
185 1hz4_A MALT regulatory protein 99.4 8.8E-12 3E-16 101.4 15.1 189 6-212 37-246 (373)
186 1na3_A Designed protein CTPR2; 99.4 1.4E-12 4.9E-17 84.2 8.5 79 107-191 9-87 (91)
187 3e4b_A ALGK; tetratricopeptide 99.4 4.9E-12 1.7E-16 106.2 11.6 129 67-215 175-318 (452)
188 3ma5_A Tetratricopeptide repea 99.3 1.8E-12 6.2E-17 86.0 6.5 74 97-181 2-75 (100)
189 2kc7_A BFR218_protein; tetratr 99.3 4.6E-12 1.6E-16 83.4 8.1 91 111-216 4-96 (99)
190 2kat_A Uncharacterized protein 99.3 1.4E-11 4.9E-16 83.4 9.1 90 62-162 13-104 (115)
191 3ma5_A Tetratricopeptide repea 99.2 2.4E-11 8.4E-16 80.5 8.0 86 64-160 3-90 (100)
192 1klx_A Cysteine rich protein B 99.2 2.9E-10 9.9E-15 79.9 13.2 121 32-189 9-137 (138)
193 1xi4_A Clathrin heavy chain; a 99.2 4.1E-11 1.4E-15 110.2 9.3 132 6-173 1092-1247(1630)
194 3mv2_B Coatomer subunit epsilo 99.2 5.3E-10 1.8E-14 88.6 13.8 165 6-206 123-307 (310)
195 4b4t_Q 26S proteasome regulato 99.2 7.6E-11 2.6E-15 97.6 8.3 174 18-209 56-243 (434)
196 1pc2_A Mitochondria fission pr 99.1 4.5E-10 1.6E-14 79.4 9.5 98 83-191 13-115 (152)
197 1xi4_A Clathrin heavy chain; a 99.1 2.8E-09 9.5E-14 98.3 16.0 160 24-209 1056-1248(1630)
198 3n71_A Histone lysine methyltr 99.1 1.4E-09 4.7E-14 92.1 13.0 141 27-184 319-472 (490)
199 3n71_A Histone lysine methyltr 99.1 3.1E-10 1.1E-14 96.0 8.7 134 69-209 310-462 (490)
200 3ly7_A Transcriptional activat 99.1 1.4E-09 4.7E-14 87.8 12.0 154 10-191 187-354 (372)
201 1b89_A Protein (clathrin heavy 99.1 4.1E-10 1.4E-14 93.1 8.4 150 18-212 123-274 (449)
202 4e6h_A MRNA 3'-END-processing 99.1 7.1E-10 2.4E-14 97.2 10.4 181 5-209 331-531 (679)
203 3bee_A Putative YFRE protein; 99.0 1.7E-09 5.8E-14 70.6 9.2 74 98-182 2-78 (93)
204 4b4t_Q 26S proteasome regulato 99.0 3.2E-09 1.1E-13 87.7 13.2 188 17-212 4-206 (434)
205 4e6h_A MRNA 3'-END-processing 99.0 2.4E-09 8.2E-14 93.9 12.8 200 5-217 366-577 (679)
206 1b89_A Protein (clathrin heavy 99.0 8.1E-11 2.8E-15 97.3 3.2 155 15-201 30-196 (449)
207 3u64_A Protein TP_0956; tetrat 99.0 1.5E-08 5.1E-13 78.9 14.8 108 64-180 148-273 (301)
208 1klx_A Cysteine rich protein B 99.0 1.5E-09 5.1E-14 76.2 8.1 108 82-209 9-124 (138)
209 2v5f_A Prolyl 4-hydroxylase su 99.0 4E-09 1.4E-13 70.3 9.5 78 107-190 5-89 (104)
210 2v5f_A Prolyl 4-hydroxylase su 98.9 1.4E-08 4.6E-13 67.7 10.5 81 68-154 5-87 (104)
211 3ly7_A Transcriptional activat 98.9 2.4E-08 8.3E-13 80.6 12.2 124 5-148 221-345 (372)
212 3qww_A SET and MYND domain-con 98.8 1.8E-08 6.3E-13 83.9 10.6 103 76-184 306-424 (433)
213 1pc2_A Mitochondria fission pr 98.8 1.7E-08 5.7E-13 71.3 8.6 84 63-157 27-115 (152)
214 3bee_A Putative YFRE protein; 98.8 1.3E-08 4.5E-13 66.3 6.8 72 65-147 3-77 (93)
215 3qwp_A SET and MYND domain-con 98.8 5.4E-08 1.8E-12 81.0 11.9 110 70-185 289-414 (429)
216 1nzn_A CGI-135 protein, fissio 98.7 2.7E-07 9.4E-12 62.9 10.7 98 83-191 16-118 (126)
217 3qww_A SET and MYND domain-con 98.6 6E-07 2.1E-11 74.7 11.4 103 32-150 312-424 (433)
218 3u64_A Protein TP_0956; tetrat 98.5 3.4E-06 1.2E-10 65.7 12.8 109 11-146 146-273 (301)
219 3qwp_A SET and MYND domain-con 98.4 1.6E-06 5.3E-11 72.2 9.6 116 27-159 297-425 (429)
220 2uy1_A Cleavage stimulation fa 98.3 7.7E-06 2.6E-10 69.3 13.2 168 5-190 201-393 (493)
221 1nzn_A CGI-135 protein, fissio 98.2 5.9E-06 2E-10 56.2 7.8 83 65-157 32-118 (126)
222 1y8m_A FIS1; mitochondria, unk 98.0 0.00017 5.9E-09 49.9 12.0 79 107-191 39-121 (144)
223 3ffl_A Anaphase-promoting comp 98.0 3E-05 1E-09 55.1 8.4 119 66-191 18-165 (167)
224 3o48_A Mitochondria fission 1 98.0 6.9E-05 2.4E-09 51.2 9.1 79 107-191 40-122 (134)
225 1y8m_A FIS1; mitochondria, unk 97.9 0.00034 1.1E-08 48.4 11.8 83 65-157 36-121 (144)
226 3o48_A Mitochondria fission 1 97.9 0.00018 6.3E-09 49.1 10.3 84 66-159 38-124 (134)
227 2uy1_A Cleavage stimulation fa 97.8 0.00015 5E-09 61.4 11.3 138 62-207 207-379 (493)
228 4h7y_A Dual specificity protei 97.8 0.00065 2.2E-08 47.4 12.4 117 11-148 7-129 (161)
229 4h7y_A Dual specificity protei 97.7 0.00048 1.6E-08 48.1 9.7 115 63-184 8-131 (161)
230 3ffl_A Anaphase-promoting comp 97.6 0.00068 2.3E-08 48.2 9.8 87 64-157 59-165 (167)
231 4g26_A Pentatricopeptide repea 97.4 0.0036 1.2E-07 53.0 13.2 157 25-209 34-202 (501)
232 2ff4_A Probable regulatory pro 97.0 0.03 1E-06 45.7 14.8 104 66-175 113-233 (388)
233 4g26_A Pentatricopeptide repea 97.0 0.021 7.1E-07 48.3 14.2 103 67-181 104-211 (501)
234 4gns_B Protein CSD3, chitin bi 96.9 0.012 4.1E-07 52.1 11.9 51 123-173 347-397 (754)
235 3kae_A CDC27, possible protein 96.8 0.04 1.4E-06 39.4 11.9 105 65-185 30-152 (242)
236 1ya0_A SMG-7 transcript varian 96.8 0.0042 1.5E-07 52.4 7.9 77 109-191 154-230 (497)
237 4gns_B Protein CSD3, chitin bi 96.6 0.07 2.4E-06 47.3 14.9 64 65-139 334-397 (754)
238 3kae_A CDC27, possible protein 96.6 0.11 3.7E-06 37.2 13.5 103 14-144 30-145 (242)
239 1ya0_A SMG-7 transcript varian 96.5 0.02 6.7E-07 48.4 10.3 80 69-159 153-232 (497)
240 3txn_A 26S proteasome regulato 96.5 0.28 9.6E-06 40.1 18.4 99 72-176 103-210 (394)
241 1zbp_A Hypothetical protein VP 95.4 0.083 2.9E-06 40.6 8.4 66 121-186 5-70 (273)
242 3spa_A Mtrpol, DNA-directed RN 95.4 1.1 3.6E-05 41.3 16.4 130 67-209 126-262 (1134)
243 4b4t_S RPN3, 26S proteasome re 94.9 0.12 4.1E-06 43.6 8.6 111 65-181 178-304 (523)
244 3mkq_B Coatomer subunit alpha; 94.9 0.71 2.4E-05 33.1 11.5 110 15-173 6-115 (177)
245 1zbp_A Hypothetical protein VP 94.7 0.54 1.8E-05 36.1 11.0 61 77-148 6-66 (273)
246 4b4t_P 26S proteasome regulato 94.7 0.97 3.3E-05 37.5 13.5 105 66-176 135-247 (445)
247 4b4t_R RPN7, 26S proteasome re 94.5 0.17 6E-06 41.8 8.7 101 70-178 133-239 (429)
248 4b4t_R RPN7, 26S proteasome re 94.4 0.42 1.4E-05 39.5 10.8 106 18-143 132-238 (429)
249 3txn_A 26S proteasome regulato 93.9 0.41 1.4E-05 39.0 9.4 124 22-162 104-235 (394)
250 2ff4_A Probable regulatory pro 93.6 0.39 1.3E-05 39.1 8.9 65 66-141 169-233 (388)
251 4b4t_S RPN3, 26S proteasome re 93.6 0.2 6.9E-06 42.3 7.2 74 65-146 228-303 (523)
252 3mkq_A Coatomer beta'-subunit; 93.2 0.96 3.3E-05 39.9 11.5 92 67-180 680-779 (814)
253 3mkq_A Coatomer beta'-subunit; 92.7 1.4 4.9E-05 38.7 11.8 48 76-139 660-707 (814)
254 1qsa_A Protein (soluble lytic 91.8 2.2 7.5E-05 37.0 11.5 95 69-175 253-347 (618)
255 4fhn_B Nucleoporin NUP120; pro 91.8 0.63 2.1E-05 43.4 8.7 117 12-138 837-963 (1139)
256 4fhn_B Nucleoporin NUP120; pro 91.6 0.21 7.3E-06 46.6 5.3 100 67-172 841-963 (1139)
257 3mkq_B Coatomer subunit alpha; 90.0 2.7 9.2E-05 30.1 8.7 78 77-170 14-99 (177)
258 4b4t_P 26S proteasome regulato 87.4 11 0.00038 31.1 12.7 108 18-142 138-247 (445)
259 3ax2_A Mitochondrial import re 86.8 2.4 8.1E-05 25.5 5.6 31 71-101 20-50 (73)
260 3spa_A Mtrpol, DNA-directed RN 84.9 15 0.00051 34.1 12.2 100 19-143 129-231 (1134)
261 3t5x_A PCI domain-containing p 82.0 8.1 0.00028 28.2 8.0 53 64-116 10-62 (203)
262 1qsa_A Protein (soluble lytic 81.2 8.1 0.00028 33.5 8.9 128 72-208 218-345 (618)
263 2w2u_A Hypothetical P60 katani 80.1 5.4 0.00019 24.5 5.5 33 65-97 16-48 (83)
264 4gq2_M Nucleoporin NUP120; bet 79.6 19 0.00065 32.9 11.2 95 74-183 816-934 (950)
265 1wy6_A Hypothetical protein ST 77.4 15 0.00051 25.3 10.6 54 125-178 103-156 (172)
266 1om2_A Protein (mitochondrial 76.5 4.1 0.00014 25.8 4.2 30 72-101 24-53 (95)
267 2crb_A Nuclear receptor bindin 76.3 7 0.00024 24.5 5.1 31 66-96 13-43 (97)
268 3ax2_A Mitochondrial import re 75.2 9.3 0.00032 22.9 5.3 31 153-183 23-53 (73)
269 2crb_A Nuclear receptor bindin 75.0 6.1 0.00021 24.8 4.5 17 123-139 25-41 (97)
270 4gq2_M Nucleoporin NUP120; bet 74.7 9.8 0.00033 34.8 7.8 91 10-101 833-930 (950)
271 2v6y_A AAA family ATPase, P60 72.2 9.5 0.00032 23.4 5.1 31 67-97 10-40 (83)
272 3t5x_A PCI domain-containing p 70.0 11 0.00037 27.5 5.8 37 105-147 12-48 (203)
273 4a5x_A MITD1, MIT domain-conta 68.1 14 0.00049 22.8 5.2 31 67-97 15-45 (86)
274 2w2u_A Hypothetical P60 katani 66.2 12 0.0004 23.0 4.5 20 155-174 27-46 (83)
275 1wy6_A Hypothetical protein ST 65.0 31 0.0011 23.8 6.8 57 77-144 100-156 (172)
276 2wpv_A GET4, UPF0363 protein Y 64.7 49 0.0017 25.9 12.6 100 63-171 48-158 (312)
277 3re2_A Predicted protein; meni 64.6 8.9 0.0003 30.8 4.5 70 66-141 253-324 (472)
278 3t5v_B Nuclear mRNA export pro 64.4 10 0.00036 31.4 5.2 93 82-180 140-254 (455)
279 2v6x_A Vacuolar protein sortin 64.3 17 0.00057 22.2 5.1 31 67-97 12-42 (85)
280 2ijq_A Hypothetical protein; s 64.3 34 0.0012 23.9 7.7 67 70-142 34-104 (161)
281 1wfd_A Hypothetical protein 15 64.0 17 0.00057 22.8 5.1 30 68-97 15-44 (93)
282 2v6y_A AAA family ATPase, P60 62.8 15 0.0005 22.5 4.5 13 130-142 9-21 (83)
283 3esl_A Checkpoint serine/threo 60.9 42 0.0014 24.4 7.3 66 107-179 80-147 (202)
284 2cpt_A SKD1 protein, vacuolar 59.6 19 0.00067 23.6 5.0 27 70-96 20-46 (117)
285 1om2_A Protein (mitochondrial 59.0 16 0.00053 23.1 4.2 27 153-179 26-52 (95)
286 2ijq_A Hypothetical protein; s 58.4 44 0.0015 23.3 7.7 61 110-176 35-104 (161)
287 4a5x_A MITD1, MIT domain-conta 58.1 20 0.00068 22.1 4.5 22 154-175 23-44 (86)
288 2cwy_A Hypothetical protein TT 58.0 29 0.001 21.7 5.4 63 72-141 5-67 (94)
289 2rpa_A Katanin P60 ATPase-cont 57.7 11 0.00037 22.9 3.2 27 71-97 15-41 (78)
290 3re2_A Predicted protein; meni 57.6 36 0.0012 27.4 6.8 60 132-191 276-346 (472)
291 2cfu_A SDSA1; SDS-hydrolase, l 56.4 47 0.0016 28.9 8.2 42 123-164 459-500 (658)
292 2dl1_A Spartin; SPG20, MIT, st 56.1 3.8 0.00013 27.0 1.0 44 128-179 18-61 (116)
293 3t5v_B Nuclear mRNA export pro 56.1 41 0.0014 27.9 7.4 70 71-146 179-254 (455)
294 3u84_A Menin; MLL, JUND, ledgf 54.4 16 0.00055 30.0 4.4 70 66-141 275-346 (550)
295 2vkj_A TM1634; membrane protei 54.4 37 0.0012 21.2 5.9 49 65-116 50-99 (106)
296 2v6x_A Vacuolar protein sortin 53.9 25 0.00086 21.4 4.5 18 158-175 24-41 (85)
297 2cfu_A SDSA1; SDS-hydrolase, l 53.7 22 0.00075 31.0 5.7 50 147-197 449-498 (658)
298 1wfd_A Hypothetical protein 15 53.6 25 0.00086 22.0 4.5 45 129-181 12-56 (93)
299 4gq4_A Menin; tumor suppressor 50.5 20 0.0007 29.3 4.5 83 66-154 260-350 (489)
300 3myv_A SUSD superfamily protei 50.2 46 0.0016 27.4 6.9 48 129-176 164-219 (454)
301 2rpa_A Katanin P60 ATPase-cont 49.7 17 0.00057 22.1 3.1 25 151-175 16-40 (78)
302 2cpt_A SKD1 protein, vacuolar 48.3 29 0.001 22.7 4.4 46 129-182 15-60 (117)
303 3mcx_A SUSD superfamily protei 47.1 61 0.0021 26.8 7.2 49 129-177 176-232 (477)
304 3kez_A Putative sugar binding 46.7 52 0.0018 27.1 6.7 48 129-176 170-225 (461)
305 4aez_C MAD3, mitotic spindle c 45.9 50 0.0017 24.5 5.7 69 62-145 114-182 (223)
306 3lew_A SUSD-like carbohydrate 45.7 64 0.0022 26.9 7.2 49 129-177 174-233 (495)
307 3u84_A Menin; MLL, JUND, ledgf 45.3 68 0.0023 26.4 6.7 60 132-191 298-368 (550)
308 4gq4_A Menin; tumor suppressor 44.4 63 0.0022 26.5 6.4 61 131-191 282-353 (489)
309 2o8p_A 14-3-3 domain containin 43.5 98 0.0034 23.0 8.2 52 125-176 137-197 (227)
310 3esl_A Checkpoint serine/threo 43.0 94 0.0032 22.6 14.0 76 61-146 73-148 (202)
311 2dl1_A Spartin; SPG20, MIT, st 39.8 78 0.0027 20.7 5.7 15 129-143 45-59 (116)
312 2cwy_A Hypothetical protein TT 37.3 75 0.0026 19.8 5.2 51 123-175 11-67 (94)
313 3bu8_A Telomeric repeat-bindin 37.1 30 0.001 25.6 3.2 36 76-116 122-157 (235)
314 3lew_A SUSD-like carbohydrate 36.2 89 0.003 26.0 6.6 53 85-143 175-233 (495)
315 3myv_A SUSD superfamily protei 35.6 96 0.0033 25.4 6.6 53 84-142 164-219 (454)
316 3bqo_A Telomeric repeat-bindin 35.2 26 0.00088 25.5 2.6 36 76-116 125-160 (211)
317 2wvi_A Mitotic checkpoint seri 33.3 1.2E+02 0.0042 21.1 9.0 69 62-145 60-128 (164)
318 3kez_A Putative sugar binding 31.5 1.1E+02 0.0036 25.2 6.3 51 85-141 171-224 (461)
319 3snx_A SUSD homolog, putative 30.1 1.2E+02 0.004 25.0 6.3 32 146-177 190-221 (460)
320 3snx_A SUSD homolog, putative 29.8 1.2E+02 0.004 25.0 6.2 31 106-142 190-220 (460)
321 3qnk_A Putative lipoprotein; a 29.3 1.3E+02 0.0046 25.0 6.6 30 147-176 182-211 (517)
322 3mcx_A SUSD superfamily protei 28.7 1.2E+02 0.004 25.0 6.1 53 84-142 176-231 (477)
323 3eab_A Spastin; spastin, MIT, 28.5 77 0.0026 19.7 3.6 15 84-98 13-27 (89)
324 3mkr_B Coatomer subunit alpha; 28.2 2.2E+02 0.0074 22.4 9.9 32 16-48 101-132 (320)
325 3hdx_A SUSD homolog, SUSD supe 27.8 1.2E+02 0.0043 24.9 6.1 30 147-176 197-226 (478)
326 3hdx_A SUSD homolog, SUSD supe 27.3 1.5E+02 0.0053 24.3 6.6 31 106-142 196-226 (478)
327 2ca5_A MXIH; transport protein 26.4 90 0.0031 19.1 3.6 30 161-190 24-53 (85)
328 2xze_A STAM-binding protein; h 25.6 1.4E+02 0.0047 20.3 5.0 33 65-97 37-69 (146)
329 3s6n_M SurviVal motor neuron p 24.4 59 0.002 16.2 2.0 17 127-143 16-32 (37)
330 3otn_A SUSD superfamily protei 24.3 1.4E+02 0.0048 24.7 5.8 46 131-176 163-226 (482)
331 3jq1_A SUSD superfamily protei 24.1 1.1E+02 0.0036 25.4 5.0 47 129-175 154-208 (481)
332 3qnk_A Putative lipoprotein; a 23.9 1.9E+02 0.0064 24.1 6.5 52 85-142 154-211 (517)
333 2br9_A 14-3-3E, 14-3-3 protein 23.8 2.3E+02 0.0077 21.1 6.9 46 130-175 147-201 (234)
334 2yhe_A SEC-alkyl sulfatase; hy 29.1 17 0.00058 31.8 0.0 48 149-197 463-510 (668)
335 2npu_A FKBP12-rapamycin comple 23.0 95 0.0032 20.7 3.6 66 123-191 50-120 (126)
336 4aez_C MAD3, mitotic spindle c 22.5 2.4E+02 0.0081 20.8 10.0 50 130-179 131-182 (223)
337 2npm_A 14-3-3 domain containin 21.6 2.7E+02 0.0091 21.1 7.1 68 67-141 145-226 (260)
338 2a9u_A Ubiquitin carboxyl-term 21.5 2E+02 0.0067 19.6 5.1 32 66-97 40-71 (144)
339 2yhe_A SEC-alkyl sulfatase; hy 25.9 21 0.00073 31.2 0.0 44 123-166 471-514 (668)
340 2e2a_A Protein (enzyme IIA); h 20.5 1.8E+02 0.006 18.6 5.0 34 63-96 15-48 (105)
341 3i4g_A SUSD-like carbohydrate 20.4 2.3E+02 0.0079 23.7 6.4 30 147-176 198-227 (528)
342 4b4t_O 26S proteasome regulato 20.2 3.3E+02 0.011 21.7 9.8 94 76-175 84-197 (393)
343 3lpz_A GET4 (YOR164C homolog); 20.1 3.2E+02 0.011 21.5 16.3 97 63-170 50-159 (336)
No 1
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.94 E-value=3.5e-26 Score=174.37 Aligned_cols=175 Identities=22% Similarity=0.233 Sum_probs=155.1
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHc---
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRL--- 81 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--- 81 (229)
.|+++++.+|+++.+++.+|.++... |++++|...+++++ ...|.++.++..+|.++...
T Consensus 27 ~~~~al~~~p~~~~a~~~lg~~~~~~-g~~~~A~~~~~~al----------------~~~P~~~~a~~~lg~~~~~~~~~ 89 (217)
T 2pl2_A 27 LFERALKENPQDPEALYWLARTQLKL-GLVNPALENGKTLV----------------ARTPRYLGGYMVLSEAYVALYRQ 89 (217)
T ss_dssp HHHHHHTTSSSCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HhCCCcHHHHHHHHHHHHHhhhh
Confidence 57889999999999999999999999 99999999999998 57788999999999999999
Q ss_pred --------cCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHH
Q psy13014 82 --------NQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRR 153 (229)
Q Consensus 82 --------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 153 (229)
|++++|+..|+++++++|++ +.++.++|.+ +..+|++++|+..|+++++++ +++.+++++
T Consensus 90 ~~~~~~~~g~~~~A~~~~~~al~~~P~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~-~~~~~~~~l 157 (217)
T 2pl2_A 90 AEDRERGKGYLEQALSVLKDAERVNPRY-----APLHLQRGLV------YALLGERDKAEASLKQALALE-DTPEIRSAL 157 (217)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHC-CCHHHHHHH
T ss_pred hhhhcccccCHHHHHHHHHHHHHhCccc-----HHHHHHHHHH------HHHcCChHHHHHHHHHHHhcc-cchHHHHHH
Confidence 99999999999999999999 9999999999 999999999999999999999 999999999
Q ss_pred HHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 154 ARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 154 a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
|.++..+|++++|+..|+++++++|+++.++.+++.++ ...++..+|+..+.++-
T Consensus 158 a~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~-~~~g~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 158 AELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASAL-LLKGKAEEAARAAALEH 212 (217)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH-TC---------------
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH-HHccCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998 88899999998887654
No 2
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.93 E-value=9e-26 Score=172.09 Aligned_cols=175 Identities=18% Similarity=0.173 Sum_probs=166.4
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy13014 14 PSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNE 93 (229)
Q Consensus 14 p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 93 (229)
|+++.+++.+|.++... |++++|...|++++ ...|.++.+++.+|.++...|++++|+..|++
T Consensus 2 p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~ 64 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYAL-GRYDAALTLFERAL----------------KENPQDPEALYWLARTQLKLGLVNPALENGKT 64 (217)
T ss_dssp --CCHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------TTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 78889999999999999 99999999999988 67899999999999999999999999999999
Q ss_pred HHHhCCCCCchhhHHHHHhHhhhhhhhHHhhcc-----------CChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhccc
Q psy13014 94 ALRSCPRSCSVSRAVFYANRSAALEKLASYLSL-----------EKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDK 162 (229)
Q Consensus 94 al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~ 162 (229)
+++++|++ +.++.++|.+ +... |++++|+..++++++++|+++.+++.+|.++...|+
T Consensus 65 al~~~P~~-----~~a~~~lg~~------~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~ 133 (217)
T 2pl2_A 65 LVARTPRY-----LGGYMVLSEA------YVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGE 133 (217)
T ss_dssp HHHHCTTC-----HHHHHHHHHH------HHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHhCCCc-----HHHHHHHHHH------HHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCC
Confidence 99999999 9999999999 9999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcccc
Q psy13014 163 LDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 163 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
+++|+..|+++++++ +++.++.++|.++ ...+++.+|+..+.+++ ++|++....
T Consensus 134 ~~~A~~~~~~al~~~-~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~P~~~~~~ 188 (217)
T 2pl2_A 134 RDKAEASLKQALALE-DTPEIRSALAELY-LSMGRLDEALAQYAKALEQAPKDLDLR 188 (217)
T ss_dssp HHHHHHHHHHHHHHC-CCHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred hHHHHHHHHHHHhcc-cchHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999 9999999999999 89999999999999999 999876543
No 3
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.93 E-value=2e-25 Score=165.20 Aligned_cols=173 Identities=14% Similarity=0.145 Sum_probs=165.5
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy13014 15 SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEA 94 (229)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 94 (229)
++..+++.+|.++... |++++|+..|++++ ...|+++.++..+|.++...|++++|+..+.++
T Consensus 3 e~~~iy~~lG~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~ 65 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTK-GDFDGAIRAYKKVL----------------KADPNNVETLLKLGKTYMDIGLPNDAIESLKKF 65 (184)
T ss_dssp -CHHHHHHHHHHHHHH-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 5677899999999999 99999999999998 677899999999999999999999999999999
Q ss_pred HHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy13014 95 LRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKIL 174 (229)
Q Consensus 95 l~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al 174 (229)
+...|.+ +.++..+|.+ +...++++.|+..+.+++.++|++..++..+|.++..+|++++|+..|++++
T Consensus 66 ~~~~~~~-----~~~~~~~~~~------~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l 134 (184)
T 3vtx_A 66 VVLDTTS-----AEAYYILGSA------NFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTI 134 (184)
T ss_dssp HHHCCCC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhcCchh-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 9999999 9999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 175 ELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 175 ~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
+++|+++.++.++|.++ .+++++.+|++.|.+++ ++|++..
T Consensus 135 ~~~p~~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 135 SIKPGFIRAYQSIGLAY-EGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HhcchhhhHHHHHHHHH-HHCCCHHHHHHHHHHHHhCCccCHH
Confidence 99999999999999999 89999999999999999 9997644
No 4
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.93 E-value=2.4e-25 Score=196.36 Aligned_cols=175 Identities=18% Similarity=0.256 Sum_probs=166.3
Q ss_pred cCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHH
Q psy13014 12 KNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKY 91 (229)
Q Consensus 12 ~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~ 91 (229)
..|+++.++..+|.++... |++++|+..|++++ ...|+++.++.++|.++..+|++++|+..|
T Consensus 4 s~P~~a~al~nLG~~~~~~-G~~~eAi~~~~kAl----------------~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~ 66 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQ-GNIEEAVRLYRKAL----------------EVFPEFAAAHSNLASVLQQQGKLQEALMHY 66 (723)
T ss_dssp --CHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCSCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4799999999999999999 99999999999998 677889999999999999999999999999
Q ss_pred HHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHH
Q psy13014 92 NEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQ 171 (229)
Q Consensus 92 ~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~ 171 (229)
+++++++|++ +.++.++|.+ +..+|++++|++.|+++++++|+++.+++++|.++..+|++++|+..|+
T Consensus 67 ~~Al~l~P~~-----~~a~~nLg~~------l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~ 135 (723)
T 4gyw_A 67 KEAIRISPTF-----ADAYSNMGNT------LKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYR 135 (723)
T ss_dssp HHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 9999999999 9999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCc
Q psy13014 172 KILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQP 215 (229)
Q Consensus 172 ~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~ 215 (229)
++++++|++..++.+++.++ ..++++.+|.+.+.+++ +.|+..
T Consensus 136 ~Al~l~P~~~~a~~~L~~~l-~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 136 TALKLKPDFPDAYCNLAHCL-QIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp HHHHHCSCCHHHHHHHHHHH-HHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCChHHHhhhhhHH-HhcccHHHHHHHHHHHHHhChhHH
Confidence 99999999999999999999 89999999999999888 777443
No 5
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.92 E-value=5.2e-25 Score=181.39 Aligned_cols=182 Identities=12% Similarity=0.090 Sum_probs=169.2
Q ss_pred hhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC-HHH
Q psy13014 8 QELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ-WSE 86 (229)
Q Consensus 8 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~ 86 (229)
.++..+|++..++..+|.++... |++++|+..+++++ ...|.+..+|+.+|.++..+|+ +++
T Consensus 88 ~ai~~~p~~~~a~~~lg~~~~~~-g~~~~Al~~~~~al----------------~l~P~~~~a~~~~g~~l~~~g~d~~e 150 (382)
T 2h6f_A 88 VQIIYSDKFRDVYDYFRAVLQRD-ERSERAFKLTRDAI----------------ELNAANYTVWHFRRVLLKSLQKDLHE 150 (382)
T ss_dssp SEECCCHHHHHHHHHHHHHHHHT-CCCHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCCHHH
T ss_pred hhhhCChhhHHHHHHHHHHHHHC-CChHHHHHHHHHHH----------------HhCccCHHHHHHHHHHHHHcccCHHH
Confidence 47899999999999999999999 99999999999998 6789999999999999999997 999
Q ss_pred HHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHH
Q psy13014 87 SLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEA 166 (229)
Q Consensus 87 A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A 166 (229)
|+..|++++.++|++ ..+|+++|.+ +..+|++++|+.+|++++.++|++..+|+++|.++..+|++++|
T Consensus 151 Al~~~~~al~l~P~~-----~~a~~~~g~~------~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eA 219 (382)
T 2h6f_A 151 EMNYITAIIEEQPKN-----YQVWHHRRVL------VEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNE 219 (382)
T ss_dssp HHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTH
T ss_pred HHHHHHHHHHHCCCC-----HHHHHHHHHH------HHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHH
Confidence 999999999999999 9999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHhccCchHH-Hhhhhhc-----cccccccc-ccCCCcccc
Q psy13014 167 LADYQKILELDPNNRDAYVATKVSPDLK-LKEKNGA-----TKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 167 ~~~~~~al~~~p~~~~~~~~l~~~~~~~-~~~~~~a-----~~~~~~~~-~~p~~~~~~ 218 (229)
+.+|+++++++|++..+|.+++.++ .. .+...+| +..+.+++ ++|++....
T Consensus 220 l~~~~~al~l~P~~~~a~~~lg~~l-~~l~~~~~eA~~~~el~~~~~Al~l~P~~~~a~ 277 (382)
T 2h6f_A 220 LQYVDQLLKEDVRNNSVWNQRYFVI-SNTTGYNDRAVLEREVQYTLEMIKLVPHNESAW 277 (382)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCSCSHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHH-HHhcCcchHHHHHHHHHHHHHHHHHCCCCHHHH
Confidence 9999999999999999999999998 56 3433666 58899999 999876543
No 6
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.91 E-value=8.5e-24 Score=156.36 Aligned_cols=157 Identities=19% Similarity=0.233 Sum_probs=147.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++++|+++.+++.+|.++... |+++++...+.+++ ...+..+.++..+|.++...+++
T Consensus 27 ~~~~al~~~p~~~~~~~~la~~~~~~-~~~~~a~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ 89 (184)
T 3vtx_A 27 AYKKVLKADPNNVETLLKLGKTYMDI-GLPNDAIESLKKFV----------------VLDTTSAEAYYILGSANFMIDEK 89 (184)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHC-CCHHHHHHHHHHHH----------------hcCchhHHHHHHHHHHHHHcCCH
Confidence 58899999999999999999999999 99999999998887 56677888999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHH
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLD 164 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 164 (229)
+.|+..+.+++..+|.+ ..++..+|.+ +..+|++++|+..|+++++++|+++.+++++|.++..+|+++
T Consensus 90 ~~a~~~~~~a~~~~~~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~ 158 (184)
T 3vtx_A 90 QAAIDALQRAIALNTVY-----ADAYYKLGLV------YDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRD 158 (184)
T ss_dssp HHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCccc-----hHHHHHHHHH------HHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHH
Confidence 99999999999999999 9999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 165 EALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 165 ~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
+|+..|+++++++|+++ .++++.+.
T Consensus 159 ~A~~~~~~al~~~p~~a--~~~lali~ 183 (184)
T 3vtx_A 159 EAVKYFKKALEKEEKKA--KYELALVP 183 (184)
T ss_dssp HHHHHHHHHHHTTHHHH--HHCSCCSC
T ss_pred HHHHHHHHHHhCCccCH--HHHHHhhC
Confidence 99999999999999764 56777654
No 7
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.91 E-value=4.4e-24 Score=163.25 Aligned_cols=177 Identities=14% Similarity=0.200 Sum_probs=161.2
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH-HHHHHHHHHHHHHHHccCHHHHHHHH
Q psy13014 13 NPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLE-QTAISLKDEGNALFRLNQWSESLAKY 91 (229)
Q Consensus 13 ~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~A~~~~ 91 (229)
.|.++..++..|.+++.. |++++|...|++++ ...| .+..+++.+|.++...|++++|+..|
T Consensus 3 ~~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~al----------------~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 65 (228)
T 4i17_A 3 QTTDPNQLKNEGNDALNA-KNYAVAFEKYSEYL----------------KLTNNQDSVTAYNCGVCADNIKKYKEAADYF 65 (228)
T ss_dssp -CCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHTTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHc-cCHHHHHHHHHHHH----------------hccCCCCcHHHHHHHHHHHHhhcHHHHHHHH
Confidence 456779999999999999 99999999999988 3444 66678888999999999999999999
Q ss_pred HHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcH-------HHHHHHHHHHHhcccHH
Q psy13014 92 NEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYL-------KVYQRRARLYQQSDKLD 164 (229)
Q Consensus 92 ~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-------~~~~~la~~~~~~~~~~ 164 (229)
++++..+|.+ ..++..+|.+ +..+|++++|+..++++++++|+++ .+++.+|.++...|+++
T Consensus 66 ~~al~~~p~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 134 (228)
T 4i17_A 66 DIAIKKNYNL-----ANAYIGKSAA------YRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIE 134 (228)
T ss_dssp HHHHHTTCSH-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHhCcch-----HHHHHHHHHH------HHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHH
Confidence 9999999998 9999999999 9999999999999999999999998 67999999999999999
Q ss_pred HHHHHHHHHHHhCCC--cHHHHHHhccCchHHHhhh---------------------------hhccccccccc-ccCCC
Q psy13014 165 EALADYQKILELDPN--NRDAYVATKVSPDLKLKEK---------------------------NGATKLSPDVF-LHPGQ 214 (229)
Q Consensus 165 ~A~~~~~~al~~~p~--~~~~~~~l~~~~~~~~~~~---------------------------~~a~~~~~~~~-~~p~~ 214 (229)
+|+..|+++++++|+ +..++.++|.++ ...++. .+|+..+.+++ ++|++
T Consensus 135 ~A~~~~~~al~~~p~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~ 213 (228)
T 4i17_A 135 KAEENYKHATDVTSKKWKTDALYSLGVLF-YNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNR 213 (228)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHH-HHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhcCCCcccHHHHHHHHHHH-HHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999 999999999998 555555 88999999999 99987
Q ss_pred cccc
Q psy13014 215 PQIQ 218 (229)
Q Consensus 215 ~~~~ 218 (229)
..+.
T Consensus 214 ~~~~ 217 (228)
T 4i17_A 214 TEIK 217 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 8
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.91 E-value=2.4e-24 Score=177.44 Aligned_cols=181 Identities=11% Similarity=0.051 Sum_probs=162.1
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhh-hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSE-IRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
.|+++++++|++..+++.+|.++..+ |+ +++|+..|++++ ...|+++.+|+.+|.++..+|+
T Consensus 119 ~~~~al~l~P~~~~a~~~~g~~l~~~-g~d~~eAl~~~~~al----------------~l~P~~~~a~~~~g~~~~~~g~ 181 (382)
T 2h6f_A 119 LTRDAIELNAANYTVWHFRRVLLKSL-QKDLHEEMNYITAII----------------EEQPKNYQVWHHRRVLVEWLRD 181 (382)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCccCHHHHHHHHHHHHHc-ccCHHHHHHHHHHHH----------------HHCCCCHHHHHHHHHHHHHccC
Confidence 47889999999999999999999999 97 999999999998 6788999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh-ccc
Q psy13014 84 WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQ-SDK 162 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~~~ 162 (229)
+++|+.+|++++.++|.+ ..+|.++|.+ +..+|++++|+.+|+++++++|++..+|+++|.++.. .|.
T Consensus 182 ~~eAl~~~~kal~ldP~~-----~~a~~~lg~~------~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~ 250 (382)
T 2h6f_A 182 PSQELEFIADILNQDAKN-----YHAWQHRQWV------IQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGY 250 (382)
T ss_dssp CTTHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHhCccC-----HHHHHHHHHH------HHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc
Confidence 999999999999999999 9999999999 9999999999999999999999999999999999999 555
Q ss_pred HHHH-----HHHHHHHHHhCCCcHHHHHHhccCchHHHh--hhhhcccccccccccCCC
Q psy13014 163 LDEA-----LADYQKILELDPNNRDAYVATKVSPDLKLK--EKNGATKLSPDVFLHPGQ 214 (229)
Q Consensus 163 ~~~A-----~~~~~~al~~~p~~~~~~~~l~~~~~~~~~--~~~~a~~~~~~~~~~p~~ 214 (229)
+++| +.+|++++.++|++..+|.+++.++ ...+ ++.+++..+.++-.+|++
T Consensus 251 ~~eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll-~~~g~~~~~~a~~~~~~~~~~p~~ 308 (382)
T 2h6f_A 251 NDRAVLEREVQYTLEMIKLVPHNESAWNYLKGIL-QDRGLSKYPNLLNQLLDLQPSHSS 308 (382)
T ss_dssp CSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHH-TTTCGGGCHHHHHHHHHHTTTCCC
T ss_pred chHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HccCccchHHHHHHHHHhccCCCC
Confidence 5777 5999999999999999999999887 4443 466666655544244433
No 9
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.91 E-value=4.5e-23 Score=144.04 Aligned_cols=118 Identities=25% Similarity=0.456 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
.+|+.+..+..+|..+++.|+|++|+..|+++++++|.+ +.+|.++|.+ +..+|++++|+..|++++++
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~------~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPEN-----AILYSNRAAC------LTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHhhH------HHhhccHHHHHHHHHHHHHh
Confidence 568999999999999999999999999999999999999 9999999999 99999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 143 NPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 143 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
+|+++.+|+++|.++..+|++++|+..|+++++++|+++.++..++.++
T Consensus 77 ~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 77 DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999988764
No 10
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.90 E-value=1.1e-23 Score=151.51 Aligned_cols=141 Identities=11% Similarity=0.054 Sum_probs=128.6
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCC
Q psy13014 23 SCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSC 102 (229)
Q Consensus 23 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~ 102 (229)
+|.++... |+++.|+..+.+++ ...|+.+..++.+|.+|+..|+|++|+.+|+++++++|++
T Consensus 3 LG~~~~~~-~~~e~ai~~~~~a~----------------~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~- 64 (150)
T 4ga2_A 3 LGSMRRSK-ADVERYIASVQGST----------------PSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD- 64 (150)
T ss_dssp ----CCCH-HHHHHHHHHHHHHS----------------CSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-
T ss_pred hHHHHHHc-ChHHHHHHHHHHhc----------------ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-
Confidence 56666777 89999999888877 6789999999999999999999999999999999999999
Q ss_pred chhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHH-HHHHHHhCCCcH
Q psy13014 103 SVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALAD-YQKILELDPNNR 181 (229)
Q Consensus 103 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~-~~~al~~~p~~~ 181 (229)
+.+|.++|.+ +..+|++++|+.+|+++++++|+++.+++++|.++...|++++|... ++++++++|+++
T Consensus 65 ----~~a~~~lg~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 65 ----PKAHRFLGLL------YELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp ----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred ----HHHHHHHHHH------HHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 9999999999 99999999999999999999999999999999999999999887766 599999999999
Q ss_pred HHHHHhccCc
Q psy13014 182 DAYVATKVSP 191 (229)
Q Consensus 182 ~~~~~l~~~~ 191 (229)
.++..++.++
T Consensus 135 ~~~~l~~~ll 144 (150)
T 4ga2_A 135 AVYKLKEQLL 144 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998888776
No 11
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.90 E-value=5e-23 Score=157.85 Aligned_cols=186 Identities=16% Similarity=0.221 Sum_probs=175.1
Q ss_pred ccchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC
Q psy13014 4 LPYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 4 ~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
-.|+++++.+|++..+++.+|.++... |++++|...+++++ ...|..+.++..+|.++...|+
T Consensus 44 ~~~~~~l~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~la~~~~~~~~ 106 (243)
T 2q7f_A 44 EAFTKAIEENKEDAIPYINFANLLSSV-NELERALAFYDKAL----------------ELDSSAATAYYGAGNVYVVKEM 106 (243)
T ss_dssp TTHHHHHTTCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HcCCcchHHHHHHHHHHHHhcc
Confidence 457889999999999999999999999 99999999999887 4556778899999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccH
Q psy13014 84 WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKL 163 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 163 (229)
+++|+..+++++...|.+ ..++..+|.+ +...|++++|+..++++++..|+++.++..+|.++...|++
T Consensus 107 ~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (243)
T 2q7f_A 107 YKEAKDMFEKALRAGMEN-----GDLFYMLGTV------LVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGML 175 (243)
T ss_dssp HHHHHHHHHHHHHHTCCS-----HHHHHHHHHH------HHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCH
Confidence 999999999999999998 9999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcccc
Q psy13014 164 DEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 164 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
++|+..++++++.+|++..++..++.++ ...++..+|++.+.+++ ++|++....
T Consensus 176 ~~A~~~~~~~~~~~~~~~~~~~~la~~~-~~~~~~~~A~~~~~~~~~~~p~~~~~~ 230 (243)
T 2q7f_A 176 DEALSQFAAVTEQDPGHADAFYNAGVTY-AYKENREKALEMLDKAIDIQPDHMLAL 230 (243)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCTTHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHH-HHccCHHHHHHHHHHHHccCcchHHHH
Confidence 9999999999999999999999999999 88999999999999999 999776544
No 12
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.89 E-value=5e-23 Score=169.09 Aligned_cols=200 Identities=17% Similarity=0.160 Sum_probs=156.9
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH-------HH-----------hhhhhhhHHH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHV-------LF-----------YLFCSQKLEQ 66 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-------~~-----------~~~~~~~~~~ 66 (229)
.|+++++.+|++..++..+|.++... |++++|...|++++...+..... .. +.......|.
T Consensus 157 ~~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 235 (388)
T 1w3b_A 157 CYLKAIETQPNFAVAWSNLGCVFNAQ-GEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPN 235 (388)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 36778888888888888888888888 88888888887776431110000 00 1112234566
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 146 (229)
++.++..+|.++...|++++|+..|++++..+|.+ +.++.++|.+ +...|++++|+..|+++++++|++
T Consensus 236 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~------~~~~g~~~~A~~~~~~al~~~p~~ 304 (388)
T 1w3b_A 236 HAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHF-----PDAYCNLANA------LKEKGSVAEAEDCYNTALRLCPTH 304 (388)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC-----HHHHHHHHHH------HHHHSCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHhhCccc
Confidence 67788888888888888888888888888888888 8888888888 888888888888888888888888
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCccc
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~ 217 (229)
+.++..+|.++...|++++|+..|+++++++|++..++..++.++ .+.+++.+|+..+.+++ ++|++...
T Consensus 305 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~-~~~g~~~~A~~~~~~a~~~~p~~~~a 375 (388)
T 1w3b_A 305 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVL-QQQGKLQEALMHYKEAIRISPTFADA 375 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH-HTTTCCHHHHHHHHHHHTTCTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhhCCCCHHH
Confidence 888888888888888888888888888888888888888888888 77888888888888888 88866543
No 13
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.89 E-value=8.7e-23 Score=167.63 Aligned_cols=197 Identities=17% Similarity=0.205 Sum_probs=123.9
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH-------HHH----------HHH-hhhhhhhHHH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQF-------IFH----------VLF-YLFCSQKLEQ 66 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-------~~~----------~~~-~~~~~~~~~~ 66 (229)
.|+++++.+|++..++..+|.++... |++++|...|++.+...+. ... ... +.......|.
T Consensus 89 ~~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 167 (388)
T 1w3b_A 89 HYRHALRLKPDFIDGYINLAAALVAA-GDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPN 167 (388)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHH-SCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHcCcchHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC
Confidence 36677777777777777777777777 7777777777665532110 000 000 1112233455
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 146 (229)
.+.++..+|.++...|++++|+..|++++.++|++ ..++..+|.+ +...|++++|+..+++++.++|++
T Consensus 168 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~------~~~~~~~~~A~~~~~~al~~~p~~ 236 (388)
T 1w3b_A 168 FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNF-----LDAYINLGNV------LKEARIFDRAVAAYLRALSLSPNH 236 (388)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHTTTCTTHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHhhCcCC
Confidence 56677777777777777777777777777777776 6666666666 666666666666666666666666
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCC
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQ 214 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~ 214 (229)
+.++..+|.++...|++++|+..|+++++++|+++.++..++.++ .+.+++.+|+..+.+++ ++|.+
T Consensus 237 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~~~p~~ 304 (388)
T 1w3b_A 237 AVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANAL-KEKGSVAEAEDCYNTALRLCPTH 304 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHH-HHHSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhhCccc
Confidence 666666666666666666666666666666666666666666665 55566666666666665 55544
No 14
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-22 Score=157.03 Aligned_cols=189 Identities=17% Similarity=0.179 Sum_probs=163.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+ +++.+++.+|.++... |++++|...+++++...+.. ....+..+.++..+|.++...|++
T Consensus 27 ~~~~a~~~~-~~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~ 95 (258)
T 3uq3_A 27 HYNKAWELH-KDITYLNNRAAAEYEK-GEYETAISTLNDAVEQGREM---------RADYKVISKSFARIGNAYHKLGDL 95 (258)
T ss_dssp HHHHHHHHS-CCTHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHT---------TCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhh-ccHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHhCccc---------ccchHHHHHHHHHHHHHHHHcccH
Confidence 367788888 8889999999999999 99999999998887322100 011223378999999999999999
Q ss_pred HHHHHHHHHHHHhCCCC---------------------CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC
Q psy13014 85 SESLAKYNEALRSCPRS---------------------CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN 143 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~---------------------~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 143 (229)
++|+..|++++.+.|.. .....+.++..+|.+ +...|++++|+..+++++..+
T Consensus 96 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~A~~~~~~a~~~~ 169 (258)
T 3uq3_A 96 KKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKE------YFTKSDWPNAVKAYTEMIKRA 169 (258)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHH------HHHhcCHHHHHHHHHHHHhcC
Confidence 99999999999954431 011237889999999 999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-cc
Q psy13014 144 PSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LH 211 (229)
Q Consensus 144 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~ 211 (229)
|.++.++..+|.++...|++++|+..++++++.+|+++.++..++.++ ...++..+|+..+.+++ ++
T Consensus 170 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 170 PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQ-IAVKEYASALETLDAARTKD 237 (258)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999 89999999999999999 88
No 15
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.89 E-value=2.1e-22 Score=160.89 Aligned_cols=183 Identities=11% Similarity=0.028 Sum_probs=152.3
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWS 85 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (229)
|+++++.+|+++.+++.+|.++... |++++|...+++++ ...|.....+..+|.++...|+++
T Consensus 114 ~~~a~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~----------------~~~~~~~~~~~~l~~~~~~~~~~~ 176 (330)
T 3hym_B 114 LSKATTLEKTYGPAWIAYGHSFAVE-SEHDQAMAAYFTAA----------------QLMKGCHLPMLYIGLEYGLTNNSK 176 (330)
T ss_dssp HHHHHTTCTTCTHHHHHHHHHHHHH-TCHHHHHHHHHHHH----------------HHTTTCSHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHc-cCHHHHHHHHHHHH----------------HhccccHHHHHHHHHHHHHHhhHH
Confidence 3444444444444444444444444 44444444444443 344566678888999999999999
Q ss_pred HHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC---------CCcHHHHHHHHHH
Q psy13014 86 ESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN---------PSYLKVYQRRARL 156 (229)
Q Consensus 86 ~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~---------p~~~~~~~~la~~ 156 (229)
+|+..+++++..+|.+ +.++..+|.+ +...|++++|+..+++++... |..+.++..+|.+
T Consensus 177 ~A~~~~~~al~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~ 245 (330)
T 3hym_B 177 LAERFFSQALSIAPED-----PFVMHEVGVV------AFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHV 245 (330)
T ss_dssp HHHHHHHHHHTTCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCC-----hHHHHHHHHH------HHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHH
Confidence 9999999999999999 9999999999 999999999999999999986 7778899999999
Q ss_pred HHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCccc
Q psy13014 157 YQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 157 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~ 217 (229)
+...|++++|+..++++++++|++..++..++.++ ...+++.+|++.+.+++ ++|++...
T Consensus 246 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~p~~~~~ 306 (330)
T 3hym_B 246 CRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIH-SLMGNFENAVDYFHTALGLRRDDTFS 306 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHH-HHHTCHHHHHHHHHTTTTTCSCCHHH
T ss_pred HHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHH-HHhccHHHHHHHHHHHHccCCCchHH
Confidence 99999999999999999999999999999999999 89999999999999999 99976543
No 16
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.89 E-value=7.9e-23 Score=166.45 Aligned_cols=199 Identities=12% Similarity=0.062 Sum_probs=157.1
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH-------HH-----------hhhhhhhHHH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHV-------LF-----------YLFCSQKLEQ 66 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-------~~-----------~~~~~~~~~~ 66 (229)
.|+++++.+|++..+++.+|.++... |++++|...|++++...+..... .. +.......|.
T Consensus 87 ~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 165 (365)
T 4eqf_A 87 FMEAAILQDPGDAEAWQFLGITQAEN-ENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPK 165 (365)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHhCcCCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCcc
Confidence 36677777888888888888888777 88888888777766431110000 00 0011233444
Q ss_pred HHHHHH----------HHHHHHHHccCHHHHHHHHHHHHHhCCC--CCchhhHHHHHhHhhhhhhhHHhhccCChHHHHH
Q psy13014 67 TAISLK----------DEGNALFRLNQWSESLAKYNEALRSCPR--SCSVSRAVFYANRSAALEKLASYLSLEKPDQSIL 134 (229)
Q Consensus 67 ~~~~~~----------~~g~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~ 134 (229)
....+. .+|.++...|++++|+..|++++..+|. + +.++..+|.+ +...|++++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~-----~~~~~~l~~~------~~~~g~~~~A~~ 234 (365)
T 4eqf_A 166 YKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMID-----PDLQTGLGVL------FHLSGEFNRAID 234 (365)
T ss_dssp HHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCC-----HHHHHHHHHH------HHHHTCHHHHHH
T ss_pred chHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccC-----HHHHHHHHHH------HHHCCCHHHHHH
Confidence 444444 4499999999999999999999999999 7 9999999999 999999999999
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCC
Q psy13014 135 ACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPG 213 (229)
Q Consensus 135 ~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~ 213 (229)
.|+++++++|+++.++..+|.++...|++++|+..|+++++++|++..++..++.++ ...+++.+|+..+.+++ +.|+
T Consensus 235 ~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~~~~~ 313 (365)
T 4eqf_A 235 AFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISC-INLGAYREAVSNFLTALSLQRK 313 (365)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHHTCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHH-HHCCCHHHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999999999999999999999999999999 89999999999999999 8886
Q ss_pred Ccc
Q psy13014 214 QPQ 216 (229)
Q Consensus 214 ~~~ 216 (229)
...
T Consensus 314 ~~~ 316 (365)
T 4eqf_A 314 SRN 316 (365)
T ss_dssp C--
T ss_pred cCC
Confidence 543
No 17
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.89 E-value=1.3e-22 Score=171.81 Aligned_cols=175 Identities=15% Similarity=0.132 Sum_probs=162.3
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHc---
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRL--- 81 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--- 81 (229)
.|+++++.+|+++.+++.+|.++... |++++|...|++++ ...|+ +.++..+|.++...
T Consensus 125 ~~~~al~~~p~~~~a~~~lg~~~~~~-g~~~~A~~~~~~al----------------~~~p~-~~~~~~lg~~~~~~~~~ 186 (474)
T 4abn_A 125 LLSKAVKLEPELVEAWNQLGEVYWKK-GDVTSAHTCFSGAL----------------THCKN-KVSLQNLSMVLRQLQTD 186 (474)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHHHHHHHHH----------------TTCCC-HHHHHHHHHHHTTCCCS
T ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------hhCCC-HHHHHHHHHHHHHhccC
Confidence 47888999999999999999999999 99999999998887 44455 58999999999999
Q ss_pred ------cCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhcc--------CChHHHHHHHHHHHhcCC---
Q psy13014 82 ------NQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSL--------EKPDQSILACSKAITLNP--- 144 (229)
Q Consensus 82 ------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~--------~~~~~A~~~~~~al~~~p--- 144 (229)
|++++|+..|++++.++|++ +.+|.++|.+ +..+ |++++|+.+|+++++++|
T Consensus 187 ~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~------~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 255 (474)
T 4abn_A 187 SGDEHSRHVMDSVRQAKLAVQMDVLD-----GRSWYILGNA------YLSLYFNTGQNPKISQQALSAYAQAEKVDRKAS 255 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGG
T ss_pred ChhhhhhhHHHHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHHHHhhccccchHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999999 9999999999 9888 999999999999999999
Q ss_pred CcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 145 SYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 145 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
+++.+++++|.++...|++++|+..|+++++++|++..++..++.++ ..+++..+|++.++++.
T Consensus 256 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~-~~lg~~~eAi~~~~~~~ 319 (474)
T 4abn_A 256 SNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLL-EFLSRLTSLLESKGKTK 319 (474)
T ss_dssp GCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999998 88888888887776653
No 18
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.88 E-value=7.5e-22 Score=150.79 Aligned_cols=159 Identities=13% Similarity=0.145 Sum_probs=148.8
Q ss_pred cchhhcccCC-chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC
Q psy13014 5 PYQQELSKNP-SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 5 ~~~~~l~~~p-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
.|+++++.+| .+..+++.+|.++... |++++|...|++++ ...|..+.++..+|.++..+|+
T Consensus 29 ~~~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al----------------~~~p~~~~~~~~l~~~~~~~~~ 91 (228)
T 4i17_A 29 KYSEYLKLTNNQDSVTAYNCGVCADNI-KKYKEAADYFDIAI----------------KKNYNLANAYIGKSAAYRDMKN 91 (228)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HTTCSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccCCCCcHHHHHHHHHHHHh-hcHHHHHHHHHHHH----------------HhCcchHHHHHHHHHHHHHccc
Confidence 4788999999 8899999999999999 99999999999988 5778899999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCchhhH-------HHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC--cHHHHHHHH
Q psy13014 84 WSESLAKYNEALRSCPRSCSVSRA-------VFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS--YLKVYQRRA 154 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~~~~~~~-------~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~la 154 (229)
+++|+..|++++.++|++ + .++..+|.+ +...|++++|+..|+++++++|+ ++.+++++|
T Consensus 92 ~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~g~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~ 160 (228)
T 4i17_A 92 NQEYIATLTEGIKAVPGN-----ATIEKLYAIYYLKEGQK------FQQAGNIEKAEENYKHATDVTSKKWKTDALYSLG 160 (228)
T ss_dssp HHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCc-----HHHHHHHHHHHHHHhHH------HHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHH
Confidence 999999999999999998 6 669999999 99999999999999999999999 999999999
Q ss_pred HHHHhcccH---------------------------HHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 155 RLYQQSDKL---------------------------DEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 155 ~~~~~~~~~---------------------------~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
.++...|+. ++|+.+|+++++++|+++.+...++.+.
T Consensus 161 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~ 224 (228)
T 4i17_A 161 VLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVK 224 (228)
T ss_dssp HHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence 999999998 9999999999999999999888776553
No 19
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.88 E-value=7.9e-23 Score=166.47 Aligned_cols=190 Identities=8% Similarity=0.032 Sum_probs=148.8
Q ss_pred cchhhcccCCchHH----HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q psy13014 5 PYQQELSKNPSFLY----TIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFR 80 (229)
Q Consensus 5 ~~~~~l~~~p~~~~----~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (229)
.+.+.+...|+++. .++.+|..+... |++++|...|++++ ...|.++.++..+|.++..
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~lg~~~~~ 111 (365)
T 4eqf_A 49 ASEKGYYFHTENPFKDWPGAFEEGLKRLKE-GDLPVTILFMEAAI----------------LQDPGDAEAWQFLGITQAE 111 (365)
T ss_dssp ----CCCCCSSCTTTTCTTHHHHHHHHHHH-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHH
T ss_pred HHHHhhhcccCCcccchhHHHHHHHHHHHC-CCHHHHHHHHHHHH----------------HhCcCCHHHHHHHHHHHHH
Confidence 45566666666654 499999999999 99999999999887 3344555566666666666
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHH--------------------------------------
Q psy13014 81 LNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLAS-------------------------------------- 122 (229)
Q Consensus 81 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~-------------------------------------- 122 (229)
.|++++|+..|++++.++|.+ +.++..+|.++.++|.
T Consensus 112 ~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~ 186 (365)
T 4eqf_A 112 NENEQAAIVALQRCLELQPNN-----LKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKS 186 (365)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-----------------
T ss_pred CCCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHH
Confidence 666666666666666666655 5555555555333321
Q ss_pred hhccCChHHHHHHHHHHHhcCCC--cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhh
Q psy13014 123 YLSLEKPDQSILACSKAITLNPS--YLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNG 200 (229)
Q Consensus 123 ~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~ 200 (229)
+...|++++|+..+++++.++|+ ++.++..+|.++...|++++|+..|+++++++|++..++..++.++ ...+++.+
T Consensus 187 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~-~~~g~~~~ 265 (365)
T 4eqf_A 187 PVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATL-ANGDRSEE 265 (365)
T ss_dssp --CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHH
T ss_pred HhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHcCCHHH
Confidence 66788999999999999999999 8999999999999999999999999999999999999999999999 88999999
Q ss_pred ccccccccc-ccCCCccc
Q psy13014 201 ATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 201 a~~~~~~~~-~~p~~~~~ 217 (229)
|+..+.+++ ++|++...
T Consensus 266 A~~~~~~al~~~p~~~~~ 283 (365)
T 4eqf_A 266 AVEAYTRALEIQPGFIRS 283 (365)
T ss_dssp HHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhcCCCchHH
Confidence 999999999 88876543
No 20
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.88 E-value=1.8e-22 Score=170.90 Aligned_cols=181 Identities=13% Similarity=0.112 Sum_probs=170.8
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEI-RTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
+++.....|++..+++.+|.++... |++ ++|...|++++ ...|.++.++..+|.++...|++
T Consensus 91 l~~~~~~~~~~a~~~~~lg~~~~~~-g~~~~~A~~~~~~al----------------~~~p~~~~a~~~lg~~~~~~g~~ 153 (474)
T 4abn_A 91 MEEVLGSAQVEAQALMLKGKALNVT-PDYSPEAEVLLSKAV----------------KLEPELVEAWNQLGEVYWKKGDV 153 (474)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHTSS-SSCCHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHhccCchhHHHHHHHHHHHHhc-cccHHHHHHHHHHHH----------------hhCCCCHHHHHHHHHHHHHcCCH
Confidence 4456677899999999999999999 999 99999999988 56788899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhcc---------CChHHHHHHHHHHHhcCCCcHHHHHHHHH
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSL---------EKPDQSILACSKAITLNPSYLKVYQRRAR 155 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~---------~~~~~A~~~~~~al~~~p~~~~~~~~la~ 155 (229)
++|+.+|++++.++|+ ..++.++|.+ +..+ |++++|+..|+++++++|+++.+|+++|.
T Consensus 154 ~~A~~~~~~al~~~p~------~~~~~~lg~~------~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 221 (474)
T 4abn_A 154 TSAHTCFSGALTHCKN------KVSLQNLSMV------LRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGN 221 (474)
T ss_dssp HHHHHHHHHHHTTCCC------HHHHHHHHHH------HTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC------HHHHHHHHHH------HHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 9999999999999987 6889999999 9999 99999999999999999999999999999
Q ss_pred HHHhc--------ccHHHHHHHHHHHHHhCC---CcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 156 LYQQS--------DKLDEALADYQKILELDP---NNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 156 ~~~~~--------~~~~~A~~~~~~al~~~p---~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
++... |++++|+..|+++++++| +++.++.++|.++ ...+++.+|+..|.+++ ++|++..
T Consensus 222 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~l~p~~~~ 293 (474)
T 4abn_A 222 AYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLH-KYEESYGEALEGFSQAAALDPAWPE 293 (474)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 99999 999999999999999999 9999999999999 89999999999999999 9998764
No 21
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.88 E-value=4.6e-22 Score=153.67 Aligned_cols=182 Identities=16% Similarity=0.180 Sum_probs=124.0
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWS 85 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (229)
|+++++.+|++..+++.+|.++... |++++|...+++++ ...|..+.++..+|.++...|+++
T Consensus 60 ~~~al~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~a~----------------~~~~~~~~~~~~la~~~~~~g~~~ 122 (252)
T 2ho1_A 60 LRKALEIDPSSADAHAALAVVFQTE-MEPKLADEEYRKAL----------------ASDSRNARVLNNYGGFLYEQKRYE 122 (252)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHhcCCChHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HHCcCcHHHHHHHHHHHHHHhHHH
Confidence 3444555555555555555555555 55555555555544 334455666777777777777777
Q ss_pred HHHHHHHHHHH--hCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccH
Q psy13014 86 ESLAKYNEALR--SCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKL 163 (229)
Q Consensus 86 ~A~~~~~~al~--~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 163 (229)
+|+..+++++. ..|.+ ..++..+|.+ +...|++++|+.+++++++..|.+..++..+|.++...|++
T Consensus 123 ~A~~~~~~~~~~~~~~~~-----~~~~~~la~~------~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 191 (252)
T 2ho1_A 123 EAYQRLLEASQDTLYPER-----SRVFENLGLV------SLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREY 191 (252)
T ss_dssp HHHHHHHHHTTCTTCTTH-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhCccCccc-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCH
Confidence 77777777777 55555 6777777777 77777777777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 164 DEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 164 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
++|+..++++++.+|.+...+..++.++ ...++..+|.+.+.+++ ..|++..
T Consensus 192 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~A~~~~~~~~~~~p~~~~ 244 (252)
T 2ho1_A 192 VPARQYYDLFAQGGGQNARSLLLGIRLA-KVFEDRDTAASYGLQLKRLYPGSLE 244 (252)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTSHH
T ss_pred HHHHHHHHHHHHhCcCcHHHHHHHHHHH-HHccCHHHHHHHHHHHHHHCCCCHH
Confidence 7777777777777777777777777776 66677777777777776 6666544
No 22
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.88 E-value=9.2e-22 Score=159.82 Aligned_cols=185 Identities=11% Similarity=0.134 Sum_probs=152.8
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWS 85 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (229)
|+++++.+|+++.+++.+|.++... |++++|...|++++ ...|.++.++..+|.++...|+++
T Consensus 87 ~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al----------------~~~~~~~~~~~~l~~~~~~~g~~~ 149 (368)
T 1fch_A 87 FEAAVQQDPKHMEAWQYLGTTQAEN-EQELLAISALRRCL----------------ELKPDNQTALMALAVSFTNESLQR 149 (368)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHC-cCHHHHHHHHHHHH----------------hcCCCCHHHHHHHHHHHHHcCCHH
Confidence 5566677777777777777777777 77777777776665 344566677777777777777777
Q ss_pred HHHHHHHHHHHhCCCCCchh----------------------------------------------hHHHHHhHhhhhhh
Q psy13014 86 ESLAKYNEALRSCPRSCSVS----------------------------------------------RAVFYANRSAALEK 119 (229)
Q Consensus 86 ~A~~~~~~al~~~p~~~~~~----------------------------------------------~~~~~~~lg~~~~~ 119 (229)
+|+..+++++...|.+.... .+.++..+|.+
T Consensus 150 ~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~--- 226 (368)
T 1fch_A 150 QACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVL--- 226 (368)
T ss_dssp HHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHH---
T ss_pred HHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHH---
Confidence 77777777776665432111 27788899999
Q ss_pred hHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhh
Q psy13014 120 LASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKN 199 (229)
Q Consensus 120 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 199 (229)
+...|++++|+..+++++.++|+++.++..+|.++...|++++|+..|+++++++|++..++..++.++ .+.+++.
T Consensus 227 ---~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~-~~~g~~~ 302 (368)
T 1fch_A 227 ---FNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC-INLGAHR 302 (368)
T ss_dssp ---HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHHTCHH
T ss_pred ---HHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 8899999
Q ss_pred hccccccccc-ccCCC
Q psy13014 200 GATKLSPDVF-LHPGQ 214 (229)
Q Consensus 200 ~a~~~~~~~~-~~p~~ 214 (229)
+|+..+.+++ +.|++
T Consensus 303 ~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 303 EAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999 88866
No 23
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.88 E-value=4.5e-22 Score=155.26 Aligned_cols=182 Identities=14% Similarity=0.142 Sum_probs=160.1
Q ss_pred hcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH---HHHHHHHHHHHHHccCHH
Q psy13014 9 ELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQT---AISLKDEGNALFRLNQWS 85 (229)
Q Consensus 9 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~ 85 (229)
..+.+|+++..++.+|..++.. |++++|+..|++++ ...|.+ +.+++.+|.+++..|+++
T Consensus 7 ~~~~~~~~~~~~~~~a~~~~~~-g~~~~A~~~~~~~l----------------~~~p~~~~~~~a~~~lg~~~~~~~~~~ 69 (261)
T 3qky_A 7 SGRLRHSSPQEAFERAMEFYNQ-GKYDRAIEYFKAVF----------------TYGRTHEWAADAQFYLARAYYQNKEYL 69 (261)
T ss_dssp ----CCSSHHHHHHHHHHHHHT-TCHHHHHHHHHHHG----------------GGCSCSTTHHHHHHHHHHHHHHTTCHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHh-CCHHHHHHHHHHHH----------------HhCCCCcchHHHHHHHHHHHHHhCcHH
Confidence 3467899999999999999999 99999999999887 444544 889999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhc--------cCChHHHHHHHHHHHhcCCCcHHHH-------
Q psy13014 86 ESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLS--------LEKPDQSILACSKAITLNPSYLKVY------- 150 (229)
Q Consensus 86 ~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~--------~~~~~~A~~~~~~al~~~p~~~~~~------- 150 (229)
+|+..|++++..+|++.. .+.+++.+|.+ ++. .|++++|+..|+++++.+|++..+.
T Consensus 70 ~A~~~~~~~l~~~p~~~~--~~~a~~~lg~~------~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~ 141 (261)
T 3qky_A 70 LAASEYERFIQIYQIDPR--VPQAEYERAMC------YYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIR 141 (261)
T ss_dssp HHHHHHHHHHHHCTTCTT--HHHHHHHHHHH------HHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCch--hHHHHHHHHHH------HHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHH
Confidence 999999999999986521 36789999999 999 9999999999999999999986655
Q ss_pred ----------HHHHHHHHhcccHHHHHHHHHHHHHhCCC---cHHHHHHhccCchHHH----------hhhhhccccccc
Q psy13014 151 ----------QRRARLYQQSDKLDEALADYQKILELDPN---NRDAYVATKVSPDLKL----------KEKNGATKLSPD 207 (229)
Q Consensus 151 ----------~~la~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~~~----------~~~~~a~~~~~~ 207 (229)
+.+|.++...|++++|+..|+++++.+|+ .+.++..++.++ ..+ +++.+|+..+.+
T Consensus 142 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~-~~~g~~~~~~~~~~~~~~A~~~~~~ 220 (261)
T 3qky_A 142 ELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAY-IAYAEQSVRARQPERYRRAVELYER 220 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH-HHHHHTSCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHH-HHhcccchhhcccchHHHHHHHHHH
Confidence 88999999999999999999999999998 567999999998 555 888999999999
Q ss_pred cc-ccCCCcc
Q psy13014 208 VF-LHPGQPQ 216 (229)
Q Consensus 208 ~~-~~p~~~~ 216 (229)
++ ..|++..
T Consensus 221 ~~~~~p~~~~ 230 (261)
T 3qky_A 221 LLQIFPDSPL 230 (261)
T ss_dssp HHHHCTTCTH
T ss_pred HHHHCCCChH
Confidence 99 8887653
No 24
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.87 E-value=2.9e-21 Score=146.01 Aligned_cols=172 Identities=12% Similarity=0.044 Sum_probs=107.8
Q ss_pred cCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHH
Q psy13014 12 KNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKY 91 (229)
Q Consensus 12 ~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~ 91 (229)
.+|+++.+++.+|.++... |++++|...+++++ ...|..+.++..+|.++...|++++|+..|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 65 (225)
T 2vq2_A 3 KANQVSNIKTQLAMEYMRG-QDYRQATASIEDAL----------------KSDPKNELAWLVRAEIYQYLKVNDKAQESF 65 (225)
T ss_dssp -CCHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHH-hhHHHHHHHHHHHH----------------HhCccchHHHHHHHHHHHHcCChHHHHHHH
Confidence 4566666677777766666 77777776666655 233444556666666666666666666666
Q ss_pred HHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhcc-CChHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHhcccHHHHHH
Q psy13014 92 NEALRSCPRSCSVSRAVFYANRSAALEKLASYLSL-EKPDQSILACSKAIT--LNPSYLKVYQRRARLYQQSDKLDEALA 168 (229)
Q Consensus 92 ~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~~~~~~A~~ 168 (229)
++++..+|.+ ..++..+|.+ +... |++++|+..++++++ ..|.+..+++.+|.++...|++++|+.
T Consensus 66 ~~a~~~~~~~-----~~~~~~l~~~------~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 134 (225)
T 2vq2_A 66 RQALSIKPDS-----AEINNNYGWF------LCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEA 134 (225)
T ss_dssp HHHHHHCTTC-----HHHHHHHHHH------HHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhCCCC-----hHHHHHHHHH------HHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHH
Confidence 6666666665 6666666666 6666 666666666666666 445555666666666666666666666
Q ss_pred HHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccC
Q psy13014 169 DYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHP 212 (229)
Q Consensus 169 ~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p 212 (229)
.++++++.+|++..++..++.++ ...+++.+|...+.+++ ..|
T Consensus 135 ~~~~~~~~~~~~~~~~~~la~~~-~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 135 YLKRSLAAQPQFPPAFKELARTK-MLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCchHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCC
Confidence 66666666666666666666665 55566666666666655 555
No 25
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.87 E-value=7.6e-22 Score=157.59 Aligned_cols=181 Identities=12% Similarity=0.027 Sum_probs=132.5
Q ss_pred hhhcccCCchHHHHHHHHHHHHHhhh-hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHH
Q psy13014 7 QQELSKNPSFLYTIYFSCFILFILFS-EIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWS 85 (229)
Q Consensus 7 ~~~l~~~p~~~~~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (229)
+++++.+|+++.+++.+|.++... | ++++|...|++++ ...|..+.++..+|.++...|+++
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~A~~~~~~a~----------------~~~~~~~~~~~~l~~~~~~~~~~~ 142 (330)
T 3hym_B 80 HKLVDLYPSNPVSWFAVGCYYLMV-GHKNEHARRYLSKAT----------------TLEKTYGPAWIAYGHSFAVESEHD 142 (330)
T ss_dssp HHHHHHCTTSTHHHHHHHHHHHHS-CSCHHHHHHHHHHHH----------------TTCTTCTHHHHHHHHHHHHHTCHH
T ss_pred HHHHHhCcCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHH----------------HhCCccHHHHHHHHHHHHHccCHH
Confidence 444555555555555555555555 5 5555555555544 345566677778888888888888
Q ss_pred HHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHH
Q psy13014 86 ESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDE 165 (229)
Q Consensus 86 ~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~ 165 (229)
+|+..|++++...|.+ ...+..+|.+ +...|++++|+..++++++.+|+++.++..+|.++...|++++
T Consensus 143 ~A~~~~~~a~~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~ 211 (330)
T 3hym_B 143 QAMAAYFTAAQLMKGC-----HLPMLYIGLE------YGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT 211 (330)
T ss_dssp HHHHHHHHHHHHTTTC-----SHHHHHHHHH------HHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHhcccc-----HHHHHHHHHH------HHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHH
Confidence 8888888888888777 6777778888 8888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHhC---------CCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 166 ALADYQKILELD---------PNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 166 A~~~~~~al~~~---------p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
|+..++++++.. |....++..++.++ ...+++.+|+..+.+++ ++|++..
T Consensus 212 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~~~~~~ 271 (330)
T 3hym_B 212 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVC-RKLKKYAEALDYHRQALVLIPQNAS 271 (330)
T ss_dssp HHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHSTTCSH
T ss_pred HHHHHHHHHHHhhhccccccccHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHhhCccchH
Confidence 888888888775 66667788888877 77778888888888887 7776543
No 26
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.87 E-value=1.8e-21 Score=156.77 Aligned_cols=183 Identities=10% Similarity=0.167 Sum_probs=170.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+|+++.+++.+|.++... |++++|...+++++ ...|..+.++..+|.++...|++
T Consensus 25 ~~~~~l~~~p~~~~~~~~~a~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~~~ 87 (359)
T 3ieg_A 25 QFHAAVDGDPDNYIAYYRRATVFLAM-GKSKAALPDLTKVI----------------ALKMDFTAARLQRGHLLLKQGKL 87 (359)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHhhCcccHHHHHHHHHHHHHc-cCHHHHHHHHHHHH----------------HhCCCcchHHHHHHHHHHHcCCh
Confidence 47788999999999999999999999 99999999999887 45677788999999999999999
Q ss_pred HHHHHHHHHHHHhCC---CCCchhhHHHHHhH------------hhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHH
Q psy13014 85 SESLAKYNEALRSCP---RSCSVSRAVFYANR------------SAALEKLASYLSLEKPDQSILACSKAITLNPSYLKV 149 (229)
Q Consensus 85 ~~A~~~~~~al~~~p---~~~~~~~~~~~~~l------------g~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 149 (229)
++|+..|++++..+| .+ ..++..+ |.+ +...|++++|+..++++++.+|+++.+
T Consensus 88 ~~A~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~ 156 (359)
T 3ieg_A 88 DEAEDDFKKVLKSNPSEQEE-----KEAESQLVKADEMQRLRSQALD------AFDGADYTAAITFLDKILEVCVWDAEL 156 (359)
T ss_dssp HHHHHHHHHHHTSCCCHHHH-----HHHHHHHHHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHhcCCcccCh-----HHHHHHHHHHHHHHHHHHHHHH------HHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 999999999999999 76 7777776 678 999999999999999999999999999
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 150 YQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 150 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
+..+|.++...|++++|+..++++++.+|.++.++..++.++ ...+++.+|+..+.+++ .+|++..
T Consensus 157 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~-~~~~~~~~A~~~~~~a~~~~~~~~~ 223 (359)
T 3ieg_A 157 RELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLY-YQLGDHELSLSEVRECLKLDQDHKR 223 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhhCccchH
Confidence 999999999999999999999999999999999999999999 88999999999999999 8887654
No 27
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.87 E-value=1.7e-21 Score=147.25 Aligned_cols=184 Identities=14% Similarity=0.110 Sum_probs=166.7
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHc-cC
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRL-NQ 83 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~ 83 (229)
.|+++++.+|++..+++.+|.++... |++++|...+++++ ...|.++.++..+|.++... |+
T Consensus 30 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~----------------~~~~~~~~~~~~l~~~~~~~~~~ 92 (225)
T 2vq2_A 30 SIEDALKSDPKNELAWLVRAEIYQYL-KVNDKAQESFRQAL----------------SIKPDSAEINNNYGWFLCGRLNR 92 (225)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHhCccchHHHHHHHHHHHHc-CChHHHHHHHHHHH----------------HhCCCChHHHHHHHHHHHHhcCc
Confidence 36788899999999999999999999 99999999999887 45566788999999999999 99
Q ss_pred HHHHHHHHHHHHH--hCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Q psy13014 84 WSESLAKYNEALR--SCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSD 161 (229)
Q Consensus 84 ~~~A~~~~~~al~--~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~ 161 (229)
+++|+..+++++. ..|.. ..++..+|.+ +...|++++|+..++++++..|.++.++..+|.++...|
T Consensus 93 ~~~A~~~~~~~~~~~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 161 (225)
T 2vq2_A 93 PAESMAYFDKALADPTYPTP-----YIANLNKGIC------SAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAG 161 (225)
T ss_dssp HHHHHHHHHHHHTSTTCSCH-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCcCCcch-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcC
Confidence 9999999999999 55655 8899999999 999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCC-CcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCccc
Q psy13014 162 KLDEALADYQKILELDP-NNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 162 ~~~~A~~~~~~al~~~p-~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~ 217 (229)
++++|+..++++++.+| .+...+..++.++ ...++..++...+..+. .+|++...
T Consensus 162 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~p~~~~~ 218 (225)
T 2vq2_A 162 QLGDADYYFKKYQSRVEVLQADDLLLGWKIA-KALGNAQAAYEYEAQLQANFPYSEEL 218 (225)
T ss_dssp CHHHHHHHHHHHHHHHCSCCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999 9999988888777 77788888888888777 88877554
No 28
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.87 E-value=8.9e-22 Score=173.71 Aligned_cols=144 Identities=18% Similarity=0.227 Sum_probs=137.9
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
..|+++.++.++|.++..+|++++|+.+|+++++++|++ +.++.++|.+ +..+|++++|+.+|++++++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~-----~~a~~nLg~~------l~~~g~~~eA~~~~~~Al~l 72 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEF-----AAAHSNLASV------LQQQGKLQEALMHYKEAIRI 72 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHh
Confidence 568899999999999999999999999999999999999 9999999999 99999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcccc
Q psy13014 143 NPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 143 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
+|+++.+++++|.++..+|++++|++.|+++++++|++..++.++|.++ .+.+++.+|+..|.+++ ++|++....
T Consensus 73 ~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~-~~~g~~~eAi~~~~~Al~l~P~~~~a~ 148 (723)
T 4gyw_A 73 SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIH-KDSGNIPEAIASYRTALKLKPDFPDAY 148 (723)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCChHHH
Confidence 9999999999999999999999999999999999999999999999999 89999999999999999 999876543
No 29
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.86 E-value=4.4e-21 Score=154.57 Aligned_cols=185 Identities=12% Similarity=0.085 Sum_probs=168.9
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+|+++.++..+|.++... |++++|...+++++ ...|.++.++..+|.++...|++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~la~~~~~~~~~ 204 (359)
T 3ieg_A 142 FLDKILEVCVWDAELRELRAECFIKE-GEPRKAISDLKAAS----------------KLKSDNTEAFYKISTLYYQLGDH 204 (359)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------TTCSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHHC-CCHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHcCCH
Confidence 46788899999999999999999999 99999999999887 56677889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHH------------hHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH----
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYA------------NRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK---- 148 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~------------~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---- 148 (229)
++|+..|++++..+|.+ ..++. .+|.+ +...|++++|+..++++++..|+++.
T Consensus 205 ~~A~~~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 273 (359)
T 3ieg_A 205 ELSLSEVRECLKLDQDH-----KRCFAHYKQVKKLNKLIESAEE------LIRDGRYTDATSKYESVMKTEPSVAEYTVR 273 (359)
T ss_dssp HHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCCSSHHHHHH
T ss_pred HHHHHHHHHHHhhCccc-----hHHHHHHHHHHHHHHHHHHHHH------HHHcCCHHHHHHHHHHHHhcCCCchHHHHH
Confidence 99999999999999998 55543 44888 99999999999999999999999874
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcccc
Q psy13014 149 VYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 149 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
++..+|.++...|++++|+..++++++.+|+++.++..+|.++ ...+++.+|...+.+++ ++|++..+.
T Consensus 274 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~A~~~~~~a~~~~p~~~~~~ 343 (359)
T 3ieg_A 274 SKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAY-LIEEMYDEAIQDYEAAQEHNENDQQIR 343 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhcCCCChHHH
Confidence 4667999999999999999999999999999999999999999 89999999999999999 999876543
No 30
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.86 E-value=7.3e-21 Score=154.49 Aligned_cols=192 Identities=11% Similarity=0.154 Sum_probs=166.8
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH--------------------------------HHH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQ--------------------------------FIF 52 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--------------------------------~~~ 52 (229)
.|+++++.+|+++.+++.+|.++... |++++|...+++++...+ ...
T Consensus 120 ~~~~al~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (368)
T 1fch_A 120 ALRRCLELKPDNQTALMALAVSFTNE-SLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFL 198 (368)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHH
Confidence 46788999999999999999999999 999999999987663211 001
Q ss_pred HHHH-hhhhhhhHHH--HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCCh
Q psy13014 53 HVLF-YLFCSQKLEQ--TAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKP 129 (229)
Q Consensus 53 ~~~~-~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 129 (229)
..+. +.......|. .+.++..+|.++...|++++|+..|++++..+|.+ +.++..+|.+ +...|++
T Consensus 199 ~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----~~~~~~l~~~------~~~~g~~ 267 (368)
T 1fch_A 199 EVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND-----YLLWNKLGAT------LANGNQS 267 (368)
T ss_dssp HHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCH
T ss_pred HHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC-----HHHHHHHHHH------HHHcCCH
Confidence 1111 1122234455 67899999999999999999999999999999999 9999999999 9999999
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCc-----------HHHHHHhccCchHHHhhh
Q psy13014 130 DQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNN-----------RDAYVATKVSPDLKLKEK 198 (229)
Q Consensus 130 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-----------~~~~~~l~~~~~~~~~~~ 198 (229)
++|+..|+++++++|+++.+++.+|.++...|++++|+..|+++++++|++ ..++..++.++ ..+++.
T Consensus 268 ~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~ 346 (368)
T 1fch_A 268 EEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLAL-SMLGQS 346 (368)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHH-HHHTCG
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHH-HHhCCh
Confidence 999999999999999999999999999999999999999999999999998 89999999999 888998
Q ss_pred hhccccccccc
Q psy13014 199 NGATKLSPDVF 209 (229)
Q Consensus 199 ~~a~~~~~~~~ 209 (229)
.+|...+.+.+
T Consensus 347 ~~A~~~~~~~l 357 (368)
T 1fch_A 347 DAYGAADARDL 357 (368)
T ss_dssp GGHHHHHTTCH
T ss_pred HhHHHhHHHHH
Confidence 88888777766
No 31
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.86 E-value=5.3e-21 Score=137.60 Aligned_cols=109 Identities=7% Similarity=-0.025 Sum_probs=106.6
Q ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 62 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
...|+++.+++.+|.++++.|++++|+..|++++.++|.+ +.+|.++|.+ +..+|++++|+.+|+++++
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~-----~~~~~~lg~~------~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYN-----VDYIMGLAAI------YQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHHccHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999999 9999999999 9999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcH
Q psy13014 142 LNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNR 181 (229)
Q Consensus 142 ~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 181 (229)
++|+++.+++++|.++..+|++++|+..|++++++.|+.+
T Consensus 99 l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred hCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999876
No 32
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.86 E-value=1e-20 Score=146.10 Aligned_cols=177 Identities=13% Similarity=-0.000 Sum_probs=163.9
Q ss_pred cccCCch-HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHH
Q psy13014 10 LSKNPSF-LYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESL 88 (229)
Q Consensus 10 l~~~p~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~ 88 (229)
-+.+|++ +.+++.+|.++... |++++|...+++++ ...|..+.++..+|.++...|++++|+
T Consensus 29 ~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al----------------~~~~~~~~~~~~la~~~~~~~~~~~A~ 91 (252)
T 2ho1_A 29 TDKGRDEARDAYIQLGLGYLQR-GNTEQAKVPLRKAL----------------EIDPSSADAHAALAVVFQTEMEPKLAD 91 (252)
T ss_dssp --CCHHHHHHHHHHHHHHHHHT-TCTGGGHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHH----------------hcCCChHHHHHHHHHHHHHcCCHHHHH
Confidence 3567877 88999999999999 99999999999887 455677889999999999999999999
Q ss_pred HHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHhcccHHHH
Q psy13014 89 AKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT--LNPSYLKVYQRRARLYQQSDKLDEA 166 (229)
Q Consensus 89 ~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~~~~~~A 166 (229)
..|++++..+|.+ ..++..+|.+ +...|++++|+.++++++. ..|.+..++..+|.++...|++++|
T Consensus 92 ~~~~~a~~~~~~~-----~~~~~~la~~------~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 160 (252)
T 2ho1_A 92 EEYRKALASDSRN-----ARVLNNYGGF------LYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQA 160 (252)
T ss_dssp HHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHCcCc-----HHHHHHHHHH------HHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999998 9999999999 9999999999999999999 8899999999999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCc
Q psy13014 167 LADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQP 215 (229)
Q Consensus 167 ~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~ 215 (229)
+..++++++.+|.+..++..++.++ ...+++.+|+..+.+++ ..|.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~~~~~~~~~~ 209 (252)
T 2ho1_A 161 KEYFEKSLRLNRNQPSVALEMADLL-YKEREYVPARQYYDLFAQGGGQNA 209 (252)
T ss_dssp HHHHHHHHHHCSCCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHTTSCCCH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCcCcH
Confidence 9999999999999999999999999 88999999999999988 777554
No 33
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.86 E-value=7.3e-21 Score=158.59 Aligned_cols=184 Identities=13% Similarity=0.085 Sum_probs=169.6
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+|++..+++.+|.++... |++++|...|++++ ...|.++.++..+|.++...|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~g~~ 227 (450)
T 2y4t_A 165 FLDKILEVCVWDAELRELRAECFIKE-GEPRKAISDLKAAS----------------KLKNDNTEAFYKISTLYYQLGDH 227 (450)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCGGGGHHHHHHHH----------------HHHCSCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHC-CCHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHcCCH
Confidence 46788899999999999999999999 99999999999887 45567788999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhH------------hhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH----
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANR------------SAALEKLASYLSLEKPDQSILACSKAITLNPSYLK---- 148 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~l------------g~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---- 148 (229)
++|+..|++++..+|++ ...+..+ |.+ +...|++++|+..|++++.+.|+++.
T Consensus 228 ~~A~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~ 296 (450)
T 2y4t_A 228 ELSLSEVRECLKLDQDH-----KRCFAHYKQVKKLNKLIESAEE------LIRDGRYTDATSKYESVMKTEPSIAEYTVR 296 (450)
T ss_dssp HHHHHHHHHHHHHCTTC-----HHHHHHHHHHHHHHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCCSSHHHHHH
T ss_pred HHHHHHHHHHHHhCCCh-----HHHHHHHHHHHHHHHHHHHHHH------HHHcCCHHHHHHHHHHHHhcCCcchHHHHH
Confidence 99999999999999998 7776655 888 99999999999999999999999854
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCccc
Q psy13014 149 VYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 149 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~ 217 (229)
++..+|.++...|++++|+..++++++++|++..++..++.++ ...+++.+|+..+.+++ ++|++...
T Consensus 297 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~-~~~~~~~~A~~~~~~al~~~p~~~~~ 365 (450)
T 2y4t_A 297 SKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAY-LIEEMYDEAIQDYETAQEHNENDQQI 365 (450)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHTTSSSCHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHhCcchHHH
Confidence 7899999999999999999999999999999999999999999 89999999999999999 99977554
No 34
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.86 E-value=5e-21 Score=140.23 Aligned_cols=173 Identities=14% Similarity=0.067 Sum_probs=159.3
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy13014 15 SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEA 94 (229)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 94 (229)
....+++.+|.++... |++++|...+++.+ ...|.++.++..+|.++...|++++|+..++++
T Consensus 6 ~~~~~~~~~~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 68 (186)
T 3as5_A 6 IRQVYYRDKGISHAKA-GRYSQAVMLLEQVY----------------DADAFDVDVALHLGIAYVKTGAVDRGTELLERS 68 (186)
T ss_dssp HHHHHHHHHHHHHHHH-TCHHHHHHHHTTTC----------------CTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHh-cCHHHHHHHHHHHH----------------HhCccChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3456788899999999 99999999998876 455667889999999999999999999999999
Q ss_pred HHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy13014 95 LRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKIL 174 (229)
Q Consensus 95 l~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al 174 (229)
+...|.+ ..++..+|.+ +...|++++|+..+++++...|.++.++..+|.++...|++++|+..+++++
T Consensus 69 ~~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 137 (186)
T 3as5_A 69 LADAPDN-----VKVATVLGLT------YVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIAL 137 (186)
T ss_dssp HHHCTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HhcCCCC-----HHHHHHHHHH------HHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence 9999998 9999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 175 ELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 175 ~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
+.+|.++.++..++.++ ...++..+|...+.+++ ++|++..
T Consensus 138 ~~~~~~~~~~~~la~~~-~~~~~~~~A~~~~~~~~~~~~~~~~ 179 (186)
T 3as5_A 138 GLRPNEGKVHRAIAFSY-EQMGRHEEALPHFKKANELDEGASV 179 (186)
T ss_dssp HHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHCCCG
T ss_pred hcCccchHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCCchh
Confidence 99999999999999999 88899999999999998 8876543
No 35
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.85 E-value=2.6e-20 Score=140.82 Aligned_cols=169 Identities=11% Similarity=0.050 Sum_probs=145.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH----------------HHHHHH
Q psy13014 16 FLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKD----------------EGNALF 79 (229)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~g~~~~ 79 (229)
++..++..|..++.. |++++|...|++++ ...|.++.+++. +|.++.
T Consensus 3 ~~~~~~~~g~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~ 65 (208)
T 3urz_A 3 SVDEMLQKVSAAIEA-GQNGQAVSYFRQTI----------------ALNIDRTEMYYWTNVDKNSEISSKLATELALAYK 65 (208)
T ss_dssp CHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHC-CCHHHHHHHHHHHH----------------HhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH
Confidence 467788999999999 99999999999988 566777778877 999999
Q ss_pred HccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy13014 80 RLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQ 159 (229)
Q Consensus 80 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 159 (229)
..|++++|+..|+++++++|++ +.++.++|.+ +...|++++|+.+|+++++++|+++.+++++|.++..
T Consensus 66 ~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 134 (208)
T 3urz_A 66 KNRNYDKAYLFYKELLQKAPNN-----VDCLEACAEM------QVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYL 134 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999 9999999999 9999999999999999999999999999999999987
Q ss_pred ccc--HHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCC
Q psy13014 160 SDK--LDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQ 214 (229)
Q Consensus 160 ~~~--~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~ 214 (229)
.|+ .+.+...+.+++...|. ..+++.+|.+. ...+++.+|+..|.+++ ++|+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~-~~a~~~~g~~~-~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 135 TAEQEKKKLETDYKKLSSPTKM-QYARYRDGLSK-LFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHHHHHC---CCCHH-HHHHHHHHHHH-HHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HhHHHHHHHHHHHHHHhCCCch-hHHHHHHHHHH-HHccCHHHHHHHHHHHHHhCCCH
Confidence 764 45677778777654332 23567778777 77888999999999999 88853
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.85 E-value=1.3e-21 Score=172.43 Aligned_cols=170 Identities=9% Similarity=0.002 Sum_probs=155.4
Q ss_pred ccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHH
Q psy13014 11 SKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAK 90 (229)
Q Consensus 11 ~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 90 (229)
+.+|++..+++.+|.++... |++++|...|++++ ...|.++.+++.+|.++...|++++|+..
T Consensus 427 ~~~p~~~~~~~~~a~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~a~~~lg~~~~~~g~~~~A~~~ 489 (681)
T 2pzi_A 427 VDFSESVELPLMEVRALLDL-GDVAKATRKLDDLA----------------ERVGWRWRLVWYRAVAELLTGDYDSATKH 489 (681)
T ss_dssp -CCTTCSHHHHHHHHHHHHH-TCHHHHHHHHHHHH----------------HHHCCCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred cccccchhHHHHHHHHHHhc-CCHHHHHHHHHHHh----------------ccCcchHHHHHHHHHHHHHcCCHHHHHHH
Confidence 89999999999999999999 99999999999988 57788899999999999999999999999
Q ss_pred HHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHH
Q psy13014 91 YNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADY 170 (229)
Q Consensus 91 ~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~ 170 (229)
|+++++++|++ +.++.++|.+ +..+|++++ +.+|+++++++|+++.+++++|.++..+|++++|+..|
T Consensus 490 ~~~al~l~P~~-----~~~~~~lg~~------~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~ 557 (681)
T 2pzi_A 490 FTEVLDTFPGE-----LAPKLALAAT------AELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTL 557 (681)
T ss_dssp HHHHHHHSTTC-----SHHHHHHHHH------HHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhCCCC-----hHHHHHHHHH------HHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 99999999999 9999999999 999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHhccCchH-H------Hhhhhhccccccccc
Q psy13014 171 QKILELDPNNRDAYVATKVSPDL-K------LKEKNGATKLSPDVF 209 (229)
Q Consensus 171 ~~al~~~p~~~~~~~~l~~~~~~-~------~~~~~~a~~~~~~~~ 209 (229)
+++++++|++..++.+++.++.. . .+++.+|.+.+....
T Consensus 558 ~~al~l~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~~ 603 (681)
T 2pzi_A 558 DEVPPTSRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEALP 603 (681)
T ss_dssp HTSCTTSTTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHTSC
T ss_pred HhhcccCcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhCC
Confidence 99999999999999999988621 1 244666666655544
No 37
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.85 E-value=1.6e-20 Score=149.65 Aligned_cols=200 Identities=11% Similarity=0.054 Sum_probs=161.4
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH--------------------------------HHHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQ--------------------------------FIFH 53 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--------------------------------~~~~ 53 (229)
|+++++.+|++..+++.+|.++... |++++|...+++.+...+ ....
T Consensus 78 ~~~a~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (327)
T 3cv0_A 78 LNHARMLDPKDIAVHAALAVSHTNE-HNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRE 156 (327)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHH
T ss_pred HHHHHhcCcCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHH
Confidence 4556666777777777777777666 777777766665542100 0001
Q ss_pred HHH-hhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHH
Q psy13014 54 VLF-YLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQS 132 (229)
Q Consensus 54 ~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A 132 (229)
... +.......|.++.++..+|.++...|++++|+..+++++..+|.+ +.++..+|.+ +...|++++|
T Consensus 157 A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~------~~~~~~~~~A 225 (327)
T 3cv0_A 157 CRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDD-----AQLWNKLGAT------LANGNRPQEA 225 (327)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHH
T ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc-----HHHHHHHHHH------HHHcCCHHHH
Confidence 111 111223345567889999999999999999999999999999998 9999999999 9999999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC------------cHHHHHHhccCchHHHhhhhh
Q psy13014 133 ILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPN------------NRDAYVATKVSPDLKLKEKNG 200 (229)
Q Consensus 133 ~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~------------~~~~~~~l~~~~~~~~~~~~~ 200 (229)
+..++++++.+|+++.++..+|.++...|++++|+..+++++.++|+ +..++..++.++ ..+++..+
T Consensus 226 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~ 304 (327)
T 3cv0_A 226 LDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLL-NVMNRPDL 304 (327)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHH-HHTTCHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHH-HhcCCHHH
Confidence 99999999999999999999999999999999999999999999999 899999999998 88999999
Q ss_pred ccccccccc-ccCCCcccc
Q psy13014 201 ATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 201 a~~~~~~~~-~~p~~~~~~ 218 (229)
|...+.+++ ..|+.+.+.
T Consensus 305 A~~~~~~~l~~~~~~~~~~ 323 (327)
T 3cv0_A 305 VELTYAQNVEPFAKEFGLQ 323 (327)
T ss_dssp HHHHTTCCSHHHHHHTTSS
T ss_pred HHHHHHHHHHhcchhhhHH
Confidence 999999888 777665543
No 38
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.85 E-value=2.3e-21 Score=151.19 Aligned_cols=181 Identities=14% Similarity=0.126 Sum_probs=159.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+|+++.+++.+|.++... |++++|...+++++. .. ......+.++..+|.++...|++
T Consensus 25 ~~~~~l~~~p~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~-~~------------~~~~~~~~~~~~lg~~~~~~~~~ 90 (272)
T 3u4t_A 25 VFNKLEAKKYNSPYIYNRRAVCYYEL-AKYDLAQKDIETYFS-KV------------NATKAKSADFEYYGKILMKKGQD 90 (272)
T ss_dssp HHHHHHHTTCCCSTTHHHHHHHHHHT-TCHHHHHHHHHHHHT-TS------------CTTTCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHH-hhHHHHHHHHHHHHh-cc------------CchhHHHHHHHHHHHHHHHcccH
Confidence 47789999999999999999999999 999999999998872 00 11112355689999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHH
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLD 164 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 164 (229)
++|+.+|++++..+|.+ +.++..+|.+ +...|++++|+.+++++++++|.++.+++.+|......++++
T Consensus 91 ~~A~~~~~~a~~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~ 159 (272)
T 3u4t_A 91 SLAIQQYQAAVDRDTTR-----LDMYGQIGSY------FYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYV 159 (272)
T ss_dssp HHHHHHHHHHHHHSTTC-----THHHHHHHHH------HHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhcCccc-----HHHHHHHHHH------HHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999 999999999999999999999999999999994444556999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHhccCchHHHhh---hhhccccccccc-cc
Q psy13014 165 EALADYQKILELDPNNRDAYVATKVSPDLKLKE---KNGATKLSPDVF-LH 211 (229)
Q Consensus 165 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~---~~~a~~~~~~~~-~~ 211 (229)
+|+..|+++++++|++..++..++.++ ..+++ ..+|+..+.+++ +.
T Consensus 160 ~A~~~~~~a~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~A~~~~~~a~~~~ 209 (272)
T 3u4t_A 160 KADSSFVKVLELKPNIYIGYLWRARAN-AAQDPDTKQGLAKPYYEKLIEVC 209 (272)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHH-HHHSTTCSSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccchHHHHHHHHHH-HHcCcchhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 66777 777888888887 44
No 39
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.85 E-value=1.1e-22 Score=146.20 Aligned_cols=134 Identities=17% Similarity=0.159 Sum_probs=121.8
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHH
Q psy13014 73 DEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQR 152 (229)
Q Consensus 73 ~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 152 (229)
.+|.++...|++++|+..+++++..+|.+ +..++.+|.+ |+..|++++|+.+|+++++++|+++.+|+.
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~-----~~~~~~la~~------y~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 70 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQK-----SIKGFYFAKL------YYEAKEYDLAKKYICTYINVQERDPKAHRF 70 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHH-----HTTHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCccc-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 37888889999999999999999999987 8999999999 999999999999999999999999999999
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccc-cccc-ccCCCcccc
Q psy13014 153 RARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLS-PDVF-LHPGQPQIQ 218 (229)
Q Consensus 153 la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~-~~~~-~~p~~~~~~ 218 (229)
+|.++...|++++|+..|+++++++|+++.++.++|.++ .+.++..++.+.+ .+++ ++|+++.+.
T Consensus 71 lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~-~~~~~~~~aa~~~~~~al~l~P~~~~~~ 137 (150)
T 4ga2_A 71 LGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELL-CKNDVTDGRAKYWVERAAKLFPGSPAVY 137 (150)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHHCSSSSHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHhCcCCHHHH
Confidence 999999999999999999999999999999999999999 8888888888775 7888 999887653
No 40
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.85 E-value=3.3e-20 Score=144.60 Aligned_cols=177 Identities=11% Similarity=0.130 Sum_probs=148.8
Q ss_pred cchhhcccCCch---HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH-
Q psy13014 5 PYQQELSKNPSF---LYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFR- 80 (229)
Q Consensus 5 ~~~~~l~~~p~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~- 80 (229)
.|+++++.+|++ +.+++.+|.++... |++++|...|++++... ...+..+.+++.+|.+++.
T Consensus 37 ~~~~~l~~~p~~~~~~~a~~~lg~~~~~~-~~~~~A~~~~~~~l~~~-------------p~~~~~~~a~~~lg~~~~~~ 102 (261)
T 3qky_A 37 YFKAVFTYGRTHEWAADAQFYLARAYYQN-KEYLLAASEYERFIQIY-------------QIDPRVPQAEYERAMCYYKL 102 (261)
T ss_dssp HHHHHGGGCSCSTTHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHC-------------TTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHC-------------CCCchhHHHHHHHHHHHHHh
Confidence 478899999999 89999999999999 99999999999988321 1234667899999999999
Q ss_pred -------ccCHHHHHHHHHHHHHhCCCCCchhhHHH--------------HHhHhhhhhhhHHhhccCChHHHHHHHHHH
Q psy13014 81 -------LNQWSESLAKYNEALRSCPRSCSVSRAVF--------------YANRSAALEKLASYLSLEKPDQSILACSKA 139 (229)
Q Consensus 81 -------~~~~~~A~~~~~~al~~~p~~~~~~~~~~--------------~~~lg~~~~~~~~~~~~~~~~~A~~~~~~a 139 (229)
.|++++|+..|++++..+|++... ..+ ++.+|.+ +...|++++|+..|+++
T Consensus 103 ~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~--~~a~~~~~~~~~~~~~~~~~la~~------~~~~g~~~~A~~~~~~~ 174 (261)
T 3qky_A 103 SPPYELDQTDTRKAIEAFQLFIDRYPNHELV--DDATQKIRELRAKLARKQYEAARL------YERRELYEAAAVTYEAV 174 (261)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHHHHCTTCTTH--HHHHHHHHHHHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHH
T ss_pred cccccccchhHHHHHHHHHHHHHHCcCchhH--HHHHHHHHHHHHHHHHHHHHHHHH------HHHccCHHHHHHHHHHH
Confidence 999999999999999999987221 112 2888999 99999999999999999
Q ss_pred HhcCCC---cHHHHHHHHHHHHhc----------ccHHHHHHHHHHHHHhCCCcHH---HHHHhccCchHHHhhhhhccc
Q psy13014 140 ITLNPS---YLKVYQRRARLYQQS----------DKLDEALADYQKILELDPNNRD---AYVATKVSPDLKLKEKNGATK 203 (229)
Q Consensus 140 l~~~p~---~~~~~~~la~~~~~~----------~~~~~A~~~~~~al~~~p~~~~---~~~~l~~~~~~~~~~~~~a~~ 203 (229)
++..|+ .+.+++.+|.++..+ |++++|+..|+++++.+|+++. +...++.+. ..++++.++..
T Consensus 175 l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~-~~~~~~~~~~~ 253 (261)
T 3qky_A 175 FDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRAR-QRLTELEGDAS 253 (261)
T ss_dssp HHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHH-HHHHHHHTCTT
T ss_pred HHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHH-HHHHHhhhhhH
Confidence 999998 567999999999987 9999999999999999999964 455555555 66666655543
Q ss_pred c
Q psy13014 204 L 204 (229)
Q Consensus 204 ~ 204 (229)
.
T Consensus 254 ~ 254 (261)
T 3qky_A 254 L 254 (261)
T ss_dssp C
T ss_pred H
Confidence 3
No 41
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.85 E-value=1.4e-20 Score=156.87 Aligned_cols=184 Identities=15% Similarity=0.026 Sum_probs=135.4
Q ss_pred CccchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHcc
Q psy13014 3 PLPYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLN 82 (229)
Q Consensus 3 ~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (229)
+..+.+++..+|+++.+++.+|..+... |++++|...|++++ ...|.++.+++.+|.++...|
T Consensus 12 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~-g~~~~A~~~~~~~l----------------~~~p~~~~~~~~l~~~~~~~g 74 (450)
T 2y4t_A 12 DLGTENLYFQSMADVEKHLELGKKLLAA-GQLADALSQFHAAV----------------DGDPDNYIAYYRRATVFLAMG 74 (450)
T ss_dssp -----------CHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTT
T ss_pred cccccccccccHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH----------------HhCCccHHHHHHHHHHHHHCC
Confidence 3467788899999999999999999999 99999999998887 345666777888888888888
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcH---HHHHHH------
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYL---KVYQRR------ 153 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l------ 153 (229)
++++|+..|++++..+|.+ ..++..+|.+ +..+|++++|+..|++++..+|++. .++..+
T Consensus 75 ~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~------~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 143 (450)
T 2y4t_A 75 KSKAALPDLTKVIQLKMDF-----TAARLQRGHL------LLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEM 143 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCc-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHH
Confidence 8888888888888888877 7788888888 7778888888888888877777776 554444
Q ss_pred ------HHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCc
Q psy13014 154 ------ARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQP 215 (229)
Q Consensus 154 ------a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~ 215 (229)
|.++...|++++|+..|+++++.+|.+..++..++.++ .+.+++.+|+..+.+++ .+|++.
T Consensus 144 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~~~~~~~~~~ 211 (450)
T 2y4t_A 144 QRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECF-IKEGEPRKAISDLKAASKLKNDNT 211 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCGGGGHHHHHHHHHHHCSCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH-HHCCCHHHHHHHHHHHHHhCCCCH
Confidence 55577777777777777777777777777777777777 66777777777777776 666543
No 42
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=5.8e-20 Score=141.64 Aligned_cols=175 Identities=17% Similarity=0.224 Sum_probs=152.1
Q ss_pred cchhhcccCCch-------HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH---------HHHHHHHH-hhhhhhhHHHH
Q psy13014 5 PYQQELSKNPSF-------LYTIYFSCFILFILFSEIRTDCHQFERQVFYI---------QFIFHVLF-YLFCSQKLEQT 67 (229)
Q Consensus 5 ~~~~~l~~~p~~-------~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~ 67 (229)
.|+++++.+|++ +.+++.+|.++... |++++|...+++++... ......+. +.......|..
T Consensus 60 ~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 138 (258)
T 3uq3_A 60 TLNDAVEQGREMRADYKVISKSFARIGNAYHKL-GDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEK 138 (258)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHhCcccccchHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcch
Confidence 367788888877 78999999999999 99999999999887521 11111111 11223467888
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcH
Q psy13014 68 AISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYL 147 (229)
Q Consensus 68 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 147 (229)
+.++..+|.++...|++++|+..|++++..+|.+ +.++..+|.+ +...|++++|+.+++++++.+|+++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~al~~~~~~~ 207 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED-----ARGYSNRAAA------LAKLMSFPEAIADCNKAIEKDPNFV 207 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCccc-----HHHHHHHHHH------HHHhCCHHHHHHHHHHHHHhCHHHH
Confidence 9999999999999999999999999999999999 9999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhC------CCcHHHHHHhccCc
Q psy13014 148 KVYQRRARLYQQSDKLDEALADYQKILELD------PNNRDAYVATKVSP 191 (229)
Q Consensus 148 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~ 191 (229)
.++..+|.++...|++++|+..|+++++++ |++..++..++.+.
T Consensus 208 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~~ 257 (258)
T 3uq3_A 208 RAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 257 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHhh
Confidence 999999999999999999999999999999 99999888877653
No 43
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.84 E-value=7.5e-20 Score=140.07 Aligned_cols=159 Identities=14% Similarity=0.126 Sum_probs=149.1
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+|++..+++.+|.++... |++++|...+++++ ...+.++.++..+|.++...|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~~a~~~~~~~~~ 141 (243)
T 2q7f_A 79 FYDKALELDSSAATAYYGAGNVYVVK-EMYKEAKDMFEKAL----------------RAGMENGDLFYMLGTVLVKLEQP 141 (243)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHTCCSHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHh-ccHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHhccH
Confidence 36788899999999999999999999 99999999999887 45566678899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHH
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLD 164 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 164 (229)
++|+..+++++...|.+ ..++..+|.+ +...|++++|+..+++++..+|+++.++..+|.++...|+++
T Consensus 142 ~~A~~~~~~~~~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 210 (243)
T 2q7f_A 142 KLALPYLQRAVELNEND-----TEARFQFGMC------LANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENRE 210 (243)
T ss_dssp HHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHhCCcc-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHH
Confidence 99999999999999998 9999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 165 EALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 165 ~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
+|+..++++++++|+++.++..++.+.
T Consensus 211 ~A~~~~~~~~~~~p~~~~~~~~~~~l~ 237 (243)
T 2q7f_A 211 KALEMLDKAIDIQPDHMLALHAKKLLG 237 (243)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHTC--
T ss_pred HHHHHHHHHHccCcchHHHHHHHHHHH
Confidence 999999999999999999999999876
No 44
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.84 E-value=2.2e-20 Score=148.44 Aligned_cols=179 Identities=11% Similarity=0.100 Sum_probs=150.7
Q ss_pred chhhccc--CCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC
Q psy13014 6 YQQELSK--NPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 6 ~~~~l~~--~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
+++.+.. +|+++.+++.+|.++... |++++|...+++ +.++.++..+|.++..+|+
T Consensus 88 l~~ll~~~~~P~~~~~~~~la~~~~~~-g~~~~Al~~l~~---------------------~~~~~~~~~l~~~~~~~g~ 145 (291)
T 3mkr_A 88 LDREMSRSVDVTNTTFLLMAASIYFYD-QNPDAALRTLHQ---------------------GDSLECMAMTVQILLKLDR 145 (291)
T ss_dssp HHHHHHSCCCCSCHHHHHHHHHHHHHT-TCHHHHHHHHTT---------------------CCSHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHC-CCHHHHHHHHhC---------------------CCCHHHHHHHHHHHHHCCC
Confidence 3445543 688888888889888888 888888887743 4566789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCchhhHHHHHhHh--hhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Q psy13014 84 WSESLAKYNEALRSCPRSCSVSRAVFYANRS--AALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSD 161 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~ 161 (229)
+++|+..|++++..+|++ .......+ .+ +...|++++|+..|+++++.+|+++.+++.+|.++..+|
T Consensus 146 ~~~A~~~l~~~~~~~p~~-----~~~~l~~a~~~l------~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g 214 (291)
T 3mkr_A 146 LDLARKELKKMQDQDEDA-----TLTQLATAWVSL------AAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQG 214 (291)
T ss_dssp HHHHHHHHHHHHHHCTTC-----HHHHHHHHHHHH------HHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCcCc-----HHHHHHHHHHHH------HhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 999999999999999987 54433333 33 445689999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhh-ccccccccc-ccCCCcccc
Q psy13014 162 KLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNG-ATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 162 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~-a~~~~~~~~-~~p~~~~~~ 218 (229)
++++|+..|+++++++|+++.++.+++.++ ...++..+ +.+.+.+++ ++|+++.+.
T Consensus 215 ~~~eA~~~l~~al~~~p~~~~~l~~l~~~~-~~~g~~~eaa~~~~~~~~~~~P~~~~~~ 272 (291)
T 3mkr_A 215 RWEAAEGVLQEALDKDSGHPETLINLVVLS-QHLGKPPEVTNRYLSQLKDAHRSHPFIK 272 (291)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHhCCCChHHH
Confidence 999999999999999999999999999888 77787765 457778888 999887653
No 45
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.84 E-value=2.8e-20 Score=160.38 Aligned_cols=200 Identities=11% Similarity=0.067 Sum_probs=160.4
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH----HHHH-------------HHHhh-hhhhhHHHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQ----FIFH-------------VLFYL-FCSQKLEQT 67 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~-------------~~~~~-~~~~~~~~~ 67 (229)
|+++++.+|++..++..+|.++... |++++|...|++.+...+ .... .+..+ ......|.+
T Consensus 362 ~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 440 (597)
T 2xpi_A 362 SNDLVDRHPEKAVTWLAVGIYYLCV-NKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGT 440 (597)
T ss_dssp HHHHHHHCTTSHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHhhCcccHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 4555666777777777777777777 777777777766543110 0000 00000 112345567
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-----
Q psy13014 68 AISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL----- 142 (229)
Q Consensus 68 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~----- 142 (229)
+.++..+|.++...|++++|+..|++++...|.+ +.++..+|.+ +...|++++|+..|+++++.
T Consensus 441 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~------~~~~g~~~~A~~~~~~~~~~~~~~~ 509 (597)
T 2xpi_A 441 HLPYLFLGMQHMQLGNILLANEYLQSSYALFQYD-----PLLLNELGVV------AFNKSDMQTAINHFQNALLLVKKTQ 509 (597)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----hHHHHHHHHH------HHHhCCHHHHHHHHHHHHHhhhccc
Confidence 7889999999999999999999999999999998 9999999999 99999999999999999988
Q ss_pred -CCCc-HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcccc
Q psy13014 143 -NPSY-LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 143 -~p~~-~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
+|++ ..++..+|.++...|++++|+..|+++++.+|+++.++..++.++ ...+++.+|.+.+.+++ ++|++....
T Consensus 510 ~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~-~~~g~~~~A~~~~~~~l~~~p~~~~~~ 587 (597)
T 2xpi_A 510 SNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVY-LHKKIPGLAITHLHESLAISPNEIMAS 587 (597)
T ss_dssp CCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHH-HHhCCHHHHHHHHHHHHhcCCCChHHH
Confidence 6665 789999999999999999999999999999999999999999999 88999999999999999 999876543
No 46
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.84 E-value=8.1e-21 Score=151.42 Aligned_cols=186 Identities=13% Similarity=0.077 Sum_probs=154.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+|++..+++.+|.++... |++++|...+++++ ...|..+.++..+|.++...|++
T Consensus 43 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~----------------~~~~~~~~~~~~la~~~~~~~~~ 105 (327)
T 3cv0_A 43 AFEAVCQAAPEREEAWRSLGLTQAEN-EKDGLAIIALNHAR----------------MLDPKDIAVHAALAVSHTNEHNA 105 (327)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------hcCcCCHHHHHHHHHHHHHcCCH
Confidence 36778888999999999999999988 99999999888887 45567788999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCch--------------------------------------------hhHHHHHhHhhhhhhh
Q psy13014 85 SESLAKYNEALRSCPRSCSV--------------------------------------------SRAVFYANRSAALEKL 120 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~--------------------------------------------~~~~~~~~lg~~~~~~ 120 (229)
++|+..+++++...|.+... ..+.++..+|.+
T Consensus 106 ~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~---- 181 (327)
T 3cv0_A 106 NAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNPNDAQLHASLGVL---- 181 (327)
T ss_dssp HHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHH----
Confidence 99999999999998875211 123455666666
Q ss_pred HHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhh
Q psy13014 121 ASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNG 200 (229)
Q Consensus 121 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~ 200 (229)
+...|++++|+..+++++..+|+++.++..+|.++...|++++|+..|+++++.+|++..++..++.++ ...+++.+
T Consensus 182 --~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~-~~~g~~~~ 258 (327)
T 3cv0_A 182 --YNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSY-SNMSQYDL 258 (327)
T ss_dssp --HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHH
T ss_pred --HHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH-HHhccHHH
Confidence 788888888888888888888888888888888888888888888888888888888888888888888 77888888
Q ss_pred ccccccccc-ccCCC
Q psy13014 201 ATKLSPDVF-LHPGQ 214 (229)
Q Consensus 201 a~~~~~~~~-~~p~~ 214 (229)
|.+.+.+++ ++|++
T Consensus 259 A~~~~~~a~~~~~~~ 273 (327)
T 3cv0_A 259 AAKQLVRAIYMQVGG 273 (327)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhCCcc
Confidence 888888887 77653
No 47
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.84 E-value=4.5e-20 Score=128.71 Aligned_cols=122 Identities=14% Similarity=0.162 Sum_probs=114.6
Q ss_pred hhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHH
Q psy13014 8 QELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSES 87 (229)
Q Consensus 8 ~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A 87 (229)
+...+||+...++..+|..++.. |++++|+..|++++ ...|.++.+++.+|.++..+|++++|
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~~~~~~~~~~~~~~A 66 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKK-GDYPTAMRHYNEAV----------------KRDPENAILYSNRAACLTKLMEFQRA 66 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HhCCCCHHHHHHHhhHHHhhccHHHH
Confidence 45678999999999999999999 99999999999998 67788999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q psy13014 88 LAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLY 157 (229)
Q Consensus 88 ~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 157 (229)
+..|+++++++|++ +.+|+++|.+ +..+|++++|+.+|+++++++|++..++..++.|+
T Consensus 67 ~~~~~~al~~~p~~-----~~a~~~lg~~------~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 67 LDDCDTCIRLDSKF-----IKGYIRKAAC------LVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhh-----hHHHHHHHHH------HHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999 9999999999 99999999999999999999999999999998764
No 48
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.83 E-value=4.4e-20 Score=132.33 Aligned_cols=117 Identities=13% Similarity=0.045 Sum_probs=110.2
Q ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 62 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
...|.++.+++.+|.+++..|++++|+..|++++..+|.+ +.+|+++|.+ +..+|++++|+.+|++++.
T Consensus 15 ~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 15 EISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYD-----SRFFLGLGAC------RQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred cCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCccc-----HHHHHHHHHH------HHHHhhHHHHHHHHHHHHh
Confidence 5678999999999999999999999999999999999999 9999999999 9999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhcc
Q psy13014 142 LNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKV 189 (229)
Q Consensus 142 ~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 189 (229)
++|+++.+++++|.++..+|++++|+..|+++++++|+++........
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 131 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTR 131 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHH
Confidence 999999999999999999999999999999999999998776544333
No 49
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.83 E-value=5.1e-20 Score=140.76 Aligned_cols=187 Identities=13% Similarity=0.017 Sum_probs=154.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy13014 16 FLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEAL 95 (229)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 95 (229)
.+..++.+|..++.. |++++|+..|++++... ...+....+++.+|.+++..|++++|+..|++++
T Consensus 3 ~~~~~~~~a~~~~~~-g~~~~A~~~~~~~~~~~-------------p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 3 PPNEIYATAQQKLQD-GNWRQAITQLEALDNRY-------------PFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFI 68 (225)
T ss_dssp CHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHC-------------TTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhC-------------CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 467889999999999 99999999999887211 1223446799999999999999999999999999
Q ss_pred HhCCCCCchhhHHHHHhHhhhhhhhH------------HhhccCChHHHHHHHHHHHhcCCCcHHHH-------------
Q psy13014 96 RSCPRSCSVSRAVFYANRSAALEKLA------------SYLSLEKPDQSILACSKAITLNPSYLKVY------------- 150 (229)
Q Consensus 96 ~~~p~~~~~~~~~~~~~lg~~~~~~~------------~~~~~~~~~~A~~~~~~al~~~p~~~~~~------------- 150 (229)
+.+|++.. .+.+++.+|.++.++| .+...|++++|+..|+++++..|+++.++
T Consensus 69 ~~~P~~~~--~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~ 146 (225)
T 2yhc_A 69 RLNPTHPN--IDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRL 146 (225)
T ss_dssp HHCTTCTT--HHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHH
T ss_pred HHCcCCCc--HHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHH
Confidence 99998722 1357889999822211 01236799999999999999999987554
Q ss_pred ----HHHHHHHHhcccHHHHHHHHHHHHHhCCCcH---HHHHHhccCchHHHhhhhhccccccccc-ccCCCccccc
Q psy13014 151 ----QRRARLYQQSDKLDEALADYQKILELDPNNR---DAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQH 219 (229)
Q Consensus 151 ----~~la~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~~ 219 (229)
+.+|.++...|++++|+..|+++++..|+++ .++..++.++ .++++..+|++.+.++. ..|++....+
T Consensus 147 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~-~~~g~~~~A~~~~~~l~~~~~~~~~~~~ 222 (225)
T 2yhc_A 147 AKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAY-RQMQMNAQAEKVAKIIAANSSNTLEHHH 222 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHCCSCCCCCTT
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHH-HHcCCcHHHHHHHHHHHhhCCCchhhcc
Confidence 6789999999999999999999999999986 6799999999 89999999999999888 7777665543
No 50
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.83 E-value=4.6e-21 Score=168.86 Aligned_cols=182 Identities=13% Similarity=0.006 Sum_probs=162.3
Q ss_pred ccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHH
Q psy13014 11 SKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAK 90 (229)
Q Consensus 11 ~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 90 (229)
..+|+++.+.+..+ ... |++++|...+++++...- .......|.++.+++.+|.++...|++++|+..
T Consensus 388 ~~~p~~~~a~~~~a---~~~-~~~~~A~~~~~~al~~~~--------~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~ 455 (681)
T 2pzi_A 388 LVDPTDVAASVLQA---TVL-SQPVQTLDSLRAARHGAL--------DADGVDFSESVELPLMEVRALLDLGDVAKATRK 455 (681)
T ss_dssp CCCTTSTTHHHHHH---TTT-CCHHHHHHHHHHHHTC---------------CCTTCSHHHHHHHHHHHHHTCHHHHHHH
T ss_pred cCCCCCcchHHhhc---ccc-cCHHHHHHHHHHhhhhcc--------cccccccccchhHHHHHHHHHHhcCCHHHHHHH
Confidence 57899999888877 566 999999999987761000 000124577888999999999999999999999
Q ss_pred HHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHH
Q psy13014 91 YNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADY 170 (229)
Q Consensus 91 ~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~ 170 (229)
|+++++.+|++ +.+|+++|.+ +..+|++++|+..|+++++++|+++.+++++|.++..+|++++ +..|
T Consensus 456 ~~~al~~~p~~-----~~a~~~lg~~------~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~ 523 (681)
T 2pzi_A 456 LDDLAERVGWR-----WRLVWYRAVA------ELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFY 523 (681)
T ss_dssp HHHHHHHHCCC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHH
T ss_pred HHHHhccCcch-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHH
Confidence 99999999999 9999999999 9999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCccc
Q psy13014 171 QKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 171 ~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~ 217 (229)
+++++++|++..++.++|.++ .+++++.+|+..|.+++ ++|++...
T Consensus 524 ~~al~~~P~~~~a~~~lg~~~-~~~g~~~~A~~~~~~al~l~P~~~~a 570 (681)
T 2pzi_A 524 QTVWSTNDGVISAAFGLARAR-SAEGDRVGAVRTLDEVPPTSRHFTTA 570 (681)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHTSCTTSTTHHHH
T ss_pred HHHHHhCCchHHHHHHHHHHH-HHcCCHHHHHHHHHhhcccCcccHHH
Confidence 999999999999999999999 89999999999999999 99976544
No 51
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.83 E-value=6.6e-20 Score=142.91 Aligned_cols=180 Identities=12% Similarity=-0.023 Sum_probs=149.7
Q ss_pred chhhccc----CCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHc
Q psy13014 6 YQQELSK----NPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRL 81 (229)
Q Consensus 6 ~~~~l~~----~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 81 (229)
|+++++. +|+++.+++.+|.++... |++++|...|++++ ...|.++.++..+|.++...
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~al----------------~~~~~~~~~~~~la~~~~~~ 90 (275)
T 1xnf_A 28 MEQILASRALTDDERAQLLYERGVLYDSL-GLRALARNDFSQAL----------------AIRPDMPEVFNYLGIYLTQA 90 (275)
T ss_dssp HHHHHTSSCCCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCCCCHHHHHHHHHHHHHT
T ss_pred HHHHHhcccccCchhHHHHHHHHHHHHHc-ccHHHHHHHHHHHH----------------HcCCCcHHHHHHHHHHHHHc
Confidence 5566665 467888999999999999 99999999998887 45667788899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Q psy13014 82 NQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSD 161 (229)
Q Consensus 82 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~ 161 (229)
|++++|+.+|++++..+|.+ ..++..+|.+ +...|++++|+..++++++++|++.......+.+ ...|
T Consensus 91 ~~~~~A~~~~~~al~~~~~~-----~~~~~~la~~------~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~ 158 (275)
T 1xnf_A 91 GNFDAAYEAFDSVLELDPTY-----NYAHLNRGIA------LYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKL 158 (275)
T ss_dssp TCHHHHHHHHHHHHHHCTTC-----THHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHH
T ss_pred cCHHHHHHHHHHHHhcCccc-----cHHHHHHHHH------HHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhc
Confidence 99999999999999999998 8999999999 9999999999999999999999988766655544 5568
Q ss_pred cHHHHHHHHHHHHHhCCCc-------------------------------------HHHHHHhccCchHHHhhhhhcccc
Q psy13014 162 KLDEALADYQKILELDPNN-------------------------------------RDAYVATKVSPDLKLKEKNGATKL 204 (229)
Q Consensus 162 ~~~~A~~~~~~al~~~p~~-------------------------------------~~~~~~l~~~~~~~~~~~~~a~~~ 204 (229)
++++|+..+.+++...|.+ ..++..+|.++ ...+++.+|...
T Consensus 159 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~ 237 (275)
T 1xnf_A 159 DEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYY-LSLGDLDSATAL 237 (275)
T ss_dssp CHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHH-HHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHH-HHcCCHHHHHHH
Confidence 8888888887777766654 46667777777 777888888888
Q ss_pred ccccc-ccCCCc
Q psy13014 205 SPDVF-LHPGQP 215 (229)
Q Consensus 205 ~~~~~-~~p~~~ 215 (229)
+.+++ ++|+++
T Consensus 238 ~~~al~~~p~~~ 249 (275)
T 1xnf_A 238 FKLAVANNVHNF 249 (275)
T ss_dssp HHHHHTTCCTTC
T ss_pred HHHHHhCCchhH
Confidence 88888 777654
No 52
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.83 E-value=2.1e-19 Score=131.52 Aligned_cols=152 Identities=16% Similarity=0.119 Sum_probs=142.3
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+|++..+++.+|.++... |++++|...+++.+ ...|..+.++..+|.++...|++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~~a~~~~~~~~~ 92 (186)
T 3as5_A 30 LLEQVYDADAFDVDVALHLGIAYVKT-GAVDRGTELLERSL----------------ADAPDNVKVATVLGLTYVQVQKY 92 (186)
T ss_dssp HHTTTCCTTSCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHhCccChHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------hcCCCCHHHHHHHHHHHHHhcCH
Confidence 36788899999999999999999999 99999999999887 45567788999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHH
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLD 164 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 164 (229)
++|+..+++++...|.+ +.++..+|.+ +...|++++|+..+++++...|.++.++..+|.++...|+++
T Consensus 93 ~~A~~~~~~~~~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 161 (186)
T 3as5_A 93 DLAVPLLIKVAEANPIN-----FNVRFRLGVA------LDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHE 161 (186)
T ss_dssp HHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhcCcHh-----HHHHHHHHHH------HHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHH
Confidence 99999999999999998 9999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcHHHH
Q psy13014 165 EALADYQKILELDPNNRDAY 184 (229)
Q Consensus 165 ~A~~~~~~al~~~p~~~~~~ 184 (229)
+|+..++++++.+|++....
T Consensus 162 ~A~~~~~~~~~~~~~~~~~~ 181 (186)
T 3as5_A 162 EALPHFKKANELDEGASVEL 181 (186)
T ss_dssp HHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHcCCCchhhH
Confidence 99999999999999876543
No 53
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.6e-19 Score=125.34 Aligned_cols=115 Identities=24% Similarity=0.387 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS 145 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 145 (229)
..+..+..+|..++..|++++|+..|++++.++|.+ +.++.++|.+ +..+|++++|+.+++++++++|+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~al~~~p~ 70 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPED-----ARGYSNRAAA------LAKLMSFPEAIADCNKAIEKDPN 70 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTT
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-----hHHHHHHHHH------HHHhcCHHHHHHHHHHHHHhCCC
Confidence 467789999999999999999999999999999999 9999999999 99999999999999999999999
Q ss_pred cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC------CCcHHHHHHhccCc
Q psy13014 146 YLKVYQRRARLYQQSDKLDEALADYQKILELD------PNNRDAYVATKVSP 191 (229)
Q Consensus 146 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~l~~~~ 191 (229)
++.+++.+|.++..+|++++|+..|+++++++ |++..++..++.+.
T Consensus 71 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~ 122 (126)
T 3upv_A 71 FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKAS 122 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999988887665
No 54
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.82 E-value=5.1e-21 Score=155.13 Aligned_cols=175 Identities=21% Similarity=0.293 Sum_probs=145.6
Q ss_pred hcccCCchHHHHHHHHHHHH------------HhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q psy13014 9 ELSKNPSFLYTIYFSCFILF------------ILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGN 76 (229)
Q Consensus 9 ~l~~~p~~~~~~~~~~~~~~------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 76 (229)
++.++|++ ++...|.... .+ +++++|...+++.+ ...+..+.++..+|.
T Consensus 95 ~l~i~p~~--ayg~~g~~~~~i~~~~~l~f~~~L-~~~~~A~~~~~~a~----------------~~~p~~a~~~~~~g~ 155 (336)
T 1p5q_A 95 IVYLKPSY--AFGSVGKEKFQIPPNAELKYELHL-KSFEKAKESWEMNS----------------EEKLEQSTIVKERGT 155 (336)
T ss_dssp EEEECTTT--TTTTTCBGGGTBCSSCCEEEEEEE-EEEECCCCGGGCCH----------------HHHHHHHHHHHHHHH
T ss_pred EEEECCcc--ccCcCCCCccCCCCCCeEEEEEEE-eecccccchhcCCH----------------HHHHHHHHHHHHHHH
Confidence 67778876 3333332221 33 56677777776655 467889999999999
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCCC----------chhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc
Q psy13014 77 ALFRLNQWSESLAKYNEALRSCPRSC----------SVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 77 ~~~~~~~~~~A~~~~~~al~~~p~~~----------~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 146 (229)
+++..|++++|+..|++++.++|.+. ......++.++|.+ +..+|++++|+.+|+++++++|++
T Consensus 156 ~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~------~~~~g~~~~A~~~~~~al~~~p~~ 229 (336)
T 1p5q_A 156 VYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMC------HLKLQAFSAAIESCNKALELDSNN 229 (336)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999872 11125899999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhc-cccccccc
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGA-TKLSPDVF 209 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a-~~~~~~~~ 209 (229)
+.+++++|.++..+|++++|+.+|+++++++|++..++..++.++ ..+++..++ .+.|.+++
T Consensus 230 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~-~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 230 EKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ-QRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 777777766 33444444
No 55
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.82 E-value=4.2e-20 Score=157.15 Aligned_cols=184 Identities=17% Similarity=0.091 Sum_probs=165.4
Q ss_pred cchhhcccCCchHH-------HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q psy13014 5 PYQQELSKNPSFLY-------TIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNA 77 (229)
Q Consensus 5 ~~~~~l~~~p~~~~-------~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 77 (229)
.|+++++.+|+++. +++.+|.++... |++++|...+++++ ...|. +.++..+|.+
T Consensus 224 ~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~~~----------------~~~~~-~~~~~~l~~~ 285 (537)
T 3fp2_A 224 MYHSLLSANTVDDPLRENAALALCYTGIFHFLK-NNLLDAQVLLQESI----------------NLHPT-PNSYIFLALT 285 (537)
T ss_dssp HHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCCC-HHHHHHHHHH
T ss_pred HHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHH----------------hcCCC-chHHHHHHHH
Confidence 46778899999866 466677777777 88899999998887 34455 7889999999
Q ss_pred HHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q psy13014 78 LFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLY 157 (229)
Q Consensus 78 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 157 (229)
+...|++++|+..|++++..+|.+ +.++..+|.+ +...|++++|+..+++++..+|+++.++..+|.++
T Consensus 286 ~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 354 (537)
T 3fp2_A 286 LADKENSQEFFKFFQKAVDLNPEY-----PPTYYHRGQM------YFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLL 354 (537)
T ss_dssp TCCSSCCHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHhccCCCC-----HHHHHHHHHH------HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999 99999999999999999999999999999999999
Q ss_pred HhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcccc
Q psy13014 158 QQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 158 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
...|++++|+..++++++.+|+++.++..++.++ ...+++.+|++.+.+++ +.|++....
T Consensus 355 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~a~~~~~~~~~~~ 415 (537)
T 3fp2_A 355 YKQGKFTESEAFFNETKLKFPTLPEVPTFFAEIL-TDRGDFDTAIKQYDIAKRLEEVQEKIH 415 (537)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH-HHhCCHHHHHHHHHHHHHcCCcchhhH
Confidence 9999999999999999999999999999999999 88999999999999999 888665443
No 56
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.82 E-value=1.4e-20 Score=158.99 Aligned_cols=183 Identities=16% Similarity=0.169 Sum_probs=154.0
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWS 85 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (229)
|+++++.+|++..++..+|.++... |++++|...+++++ ...|.++.++..+|.++...|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~~~~ 355 (514)
T 2gw1_A 293 FDKALKLDSNNSSVYYHRGQMNFIL-QNYDQAGKDFDKAK----------------ELDPENIFPYIQLACLAYRENKFD 355 (514)
T ss_dssp HHHHHTTCTTCTHHHHHHHHHHHHT-TCTTHHHHHHHHHH----------------HTCSSCSHHHHHHHHHTTTTTCHH
T ss_pred HHHHhhcCcCCHHHHHHHHHHHHHh-CCHHHHHHHHHHHH----------------HhChhhHHHHHHHHHHHHHcCCHH
Confidence 5556666777777777777777666 77777777666665 445666778889999999999999
Q ss_pred HHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHh
Q psy13014 86 ESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK------VYQRRARLYQQ 159 (229)
Q Consensus 86 ~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~la~~~~~ 159 (229)
+|+..+++++...|.+ +.++..+|.+ +...|++++|+..+++++...|++.. +++.+|.++..
T Consensus 356 ~A~~~~~~~~~~~~~~-----~~~~~~la~~------~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 424 (514)
T 2gw1_A 356 DCETLFSEAKRKFPEA-----PEVPNFFAEI------LTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTR 424 (514)
T ss_dssp HHHHHHHHHHHHSTTC-----SHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcccC-----HHHHHHHHHH------HHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhh
Confidence 9999999999999988 8889999999 99999999999999999999888754 89999999999
Q ss_pred ---cccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCccc
Q psy13014 160 ---SDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 160 ---~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~ 217 (229)
.|++++|+..|++++..+|++..++..++.++ ...+++.+|...+.+++ ++|++...
T Consensus 425 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~~~~~~~ 485 (514)
T 2gw1_A 425 NPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMK-LQQEDIDEAITLFEESADLARTMEEK 485 (514)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCSSHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHhccccHHH
Confidence 99999999999999999999999999999998 88899999999999998 88866543
No 57
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.82 E-value=1.5e-19 Score=135.34 Aligned_cols=168 Identities=21% Similarity=0.165 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 18 YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
..+-..+.....+ |+++.+...++... ...+..+..+..+|..++..|+|++|+..|++++.+
T Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 67 (198)
T 2fbn_A 5 HHHHHHSSGRENL-YFQGAKKSIYDYTD----------------EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDF 67 (198)
T ss_dssp ------------------CCCSGGGCCH----------------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ccccchhhhhhhh-hhccccCchhhCCH----------------HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3334445555556 77777777665443 466778889999999999999999999999999999
Q ss_pred CCCCCchh-----------hHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHH
Q psy13014 98 CPRSCSVS-----------RAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEA 166 (229)
Q Consensus 98 ~p~~~~~~-----------~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A 166 (229)
.|.+.... ...++.++|.+ +..+|++++|+.++++++.++|+++.+++++|.++..+|++++|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~la~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A 141 (198)
T 2fbn_A 68 FIHTEEWDDQILLDKKKNIEISCNLNLATC------YNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEA 141 (198)
T ss_dssp TTTCTTCCCHHHHHHHHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HhcccccchhhHHHHHHHHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHH
Confidence 98872100 12899999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhcc-ccccccc
Q psy13014 167 LADYQKILELDPNNRDAYVATKVSPDLKLKEKNGAT-KLSPDVF 209 (229)
Q Consensus 167 ~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~-~~~~~~~ 209 (229)
+..|+++++++|++..++..++.+. ..+++..++. ..+..++
T Consensus 142 ~~~~~~al~~~p~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 142 KENLYKAASLNPNNLDIRNSYELCV-NKLKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHH-HHHHHHHC----------
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHH-HHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998 7777777766 4444444
No 58
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.82 E-value=5.6e-21 Score=149.04 Aligned_cols=184 Identities=14% Similarity=0.118 Sum_probs=161.9
Q ss_pred chhhcccCCch----HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHc
Q psy13014 6 YQQELSKNPSF----LYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRL 81 (229)
Q Consensus 6 ~~~~l~~~p~~----~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 81 (229)
|+++++ .|++ ..+++.+|.++... |++++|...|++++ ...|..+.++..+|.++...
T Consensus 60 ~~~a~~-~~~~~~~~~~~~~~lg~~~~~~-~~~~~A~~~~~~a~----------------~~~~~~~~~~~~l~~~~~~~ 121 (272)
T 3u4t_A 60 IETYFS-KVNATKAKSADFEYYGKILMKK-GQDSLAIQQYQAAV----------------DRDTTRLDMYGQIGSYFYNK 121 (272)
T ss_dssp HHHHHT-TSCTTTCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHSTTCTHHHHHHHHHHHHT
T ss_pred HHHHHh-ccCchhHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHH----------------hcCcccHHHHHHHHHHHHHc
Confidence 566676 4443 34589999999999 99999999999988 46677788999999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHh-hhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Q psy13014 82 NQWSESLAKYNEALRSCPRSCSVSRAVFYANRS-AALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQS 160 (229)
Q Consensus 82 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg-~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 160 (229)
|++++|+..|++++..+|.+ +.++.++| .+ + ..+++++|+..++++++++|++..+++.+|.++..+
T Consensus 122 ~~~~~A~~~~~~al~~~~~~-----~~~~~~l~~~~------~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~ 189 (272)
T 3u4t_A 122 GNFPLAIQYMEKQIRPTTTD-----PKVFYELGQAY------Y-YNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQ 189 (272)
T ss_dssp TCHHHHHHHHGGGCCSSCCC-----HHHHHHHHHHH------H-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhhcCCCc-----HHHHHHHHHHH------H-HHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHc
Confidence 99999999999999999999 99999999 55 5 456999999999999999999999999999999999
Q ss_pred cc---HHHHHHHHHHHHHhC---CCc-----HHHHHHhccCchHHHhhhhhccccccccc-ccCCCcccccC
Q psy13014 161 DK---LDEALADYQKILELD---PNN-----RDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQHN 220 (229)
Q Consensus 161 ~~---~~~A~~~~~~al~~~---p~~-----~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~~~ 220 (229)
|+ +++|+..|++++++. |+. ..++..+|.++ ...+++.+|+..+.+++ ++|++......
T Consensus 190 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 260 (272)
T 3u4t_A 190 DPDTKQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYY-TINRDKVKADAAWKNILALDPTNKKAIDG 260 (272)
T ss_dssp STTCSSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhcCccHHHHHHH
Confidence 99 999999999999986 542 36888899998 88999999999999999 99988766544
No 59
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.82 E-value=2.4e-19 Score=128.93 Aligned_cols=117 Identities=9% Similarity=-0.040 Sum_probs=112.5
Q ss_pred CccchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHcc
Q psy13014 3 PLPYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLN 82 (229)
Q Consensus 3 ~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (229)
+..|+++++++|+++.+++.+|.++... |++++|...|++++ ...|.++.+|+.+|.++...|
T Consensus 22 ~~~l~~al~l~p~~~~~~~~lg~~~~~~-g~~~eA~~~~~~al----------------~~~P~~~~~~~~lg~~~~~~g 84 (151)
T 3gyz_A 22 GATLKDINAIPDDMMDDIYSYAYDFYNK-GRIEEAEVFFRFLC----------------IYDFYNVDYIMGLAAIYQIKE 84 (151)
T ss_dssp SCCTGGGCCSCHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHhCCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHHc
Confidence 5678999999999999999999999999 99999999999998 678999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcH
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYL 147 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 147 (229)
++++|+.+|++++.++|++ +.+|+++|.+ +..+|++++|+.+|++++++.|+.+
T Consensus 85 ~~~~Ai~~~~~al~l~P~~-----~~~~~~lg~~------~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 85 QFQQAADLYAVAFALGKND-----YTPVFHTGQC------QLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp CHHHHHHHHHHHHHHSSSC-----CHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred cHHHHHHHHHHHHhhCCCC-----cHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999 9999999999 9999999999999999999999875
No 60
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.81 E-value=2.5e-19 Score=129.87 Aligned_cols=126 Identities=25% Similarity=0.325 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh------------------CCCCCchhhHHHHHhHhhhhhhhHHhhcc
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESLAKYNEALRS------------------CPRSCSVSRAVFYANRSAALEKLASYLSL 126 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------------------~p~~~~~~~~~~~~~lg~~~~~~~~~~~~ 126 (229)
...+..+...|..++..|+|++|+..|.+++.+ +|.. ..++.++|.| +..+
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~nla~~------~~~~ 76 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKN-----IPLYANMSQC------YLNI 76 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTH-----HHHHHHHHHH------HHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHH-----HHHHHHHHHH------HHhc
Confidence 456788999999999999999999999999999 4444 7899999999 9999
Q ss_pred CChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcH-HHHHHhccCchHHHhhhhhcc
Q psy13014 127 EKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNR-DAYVATKVSPDLKLKEKNGAT 202 (229)
Q Consensus 127 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~l~~~~~~~~~~~~~a~ 202 (229)
|++++|+.++++++.++|+++.+++++|.++..+|++++|+..|+++++++|+++ .+...++.+. .++++..+..
T Consensus 77 ~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~-~~~~~~~~~~ 152 (162)
T 3rkv_A 77 GDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVT-ERRAEKKADS 152 (162)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH-HHHHHHTTSS
T ss_pred CcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 7788888887 5666544443
No 61
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.81 E-value=4.2e-20 Score=157.17 Aligned_cols=182 Identities=19% Similarity=0.226 Sum_probs=146.1
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWS 85 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (229)
|+++++.+|+++.+++.+|.++... |++++|...+++++ ...|.++.++..+|.++...|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~----------------~~~~~~~~~~~~la~~~~~~g~~~ 361 (537)
T 3fp2_A 299 FQKAVDLNPEYPPTYYHRGQMYFIL-QDYKNAKEDFQKAQ----------------SLNPENVYPYIQLACLLYKQGKFT 361 (537)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCSHHHHHHHHHHHHTTCHH
T ss_pred HHHHhccCCCCHHHHHHHHHHHHhc-CCHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHcCCHH
Confidence 4566667777777777777777777 77777777776665 445666778888888888888888
Q ss_pred HHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHh
Q psy13014 86 ESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK------VYQRRARLYQQ 159 (229)
Q Consensus 86 ~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~la~~~~~ 159 (229)
+|+..+++++..+|.+ +.++..+|.+ +...|++++|+..++++++..|++.. .++.+|.++..
T Consensus 362 ~A~~~~~~~~~~~~~~-----~~~~~~l~~~------~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~ 430 (537)
T 3fp2_A 362 ESEAFFNETKLKFPTL-----PEVPTFFAEI------LTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILAR 430 (537)
T ss_dssp HHHHHHHHHHHHCTTC-----THHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCC-----hHHHHHHHHH------HHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHH
Confidence 8888888888888888 8888888888 88888999999999888888765543 35666788888
Q ss_pred c----------ccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 160 S----------DKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 160 ~----------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
. |++++|+..|+++++.+|++..++..++.++ ...++..+|+..+.+++ ++|.+..
T Consensus 431 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~~~~~~~~ 497 (537)
T 3fp2_A 431 QSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQAKIGLAQLK-LQMEKIDEAIELFEDSAILARTMDE 497 (537)
T ss_dssp HHTC----CCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHC--CHH
T ss_pred HhhccchhhhHhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHhccHHHHHHHHHHHHHhCCCcHH
Confidence 8 9999999999999999999999999999998 88889999999999998 8885543
No 62
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.81 E-value=2.3e-19 Score=154.72 Aligned_cols=198 Identities=12% Similarity=-0.012 Sum_probs=137.1
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH----HHHH-------------HHHhh-hhhhhHHH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQ----FIFH-------------VLFYL-FCSQKLEQ 66 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~-------------~~~~~-~~~~~~~~ 66 (229)
-|+++++.+|++..++..++.++... |++++|...+++.+...+ .... ....+ ......|.
T Consensus 327 ~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 405 (597)
T 2xpi_A 327 ITTKILEIDPYNLDVYPLHLASLHES-GEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQ 405 (597)
T ss_dssp HHHHHHHHCTTCCTTHHHHHHHHHHH-TCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHcCcccHHHHHHHHHHHHHh-CCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 47888999999999999999999999 999999999987762210 0000 00000 11122344
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 146 (229)
+..++..+|.++...|++++|+..|++++...|.+ ..++..+|.+ +...|++++|+..|+++++.+|.+
T Consensus 406 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-----~~~~~~l~~~------~~~~g~~~~A~~~~~~~~~~~~~~ 474 (597)
T 2xpi_A 406 FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGT-----HLPYLFLGMQ------HMQLGNILLANEYLQSSYALFQYD 474 (597)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTC-----SHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-----hHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCC
Confidence 55666777777777777777777777777777766 6667777777 777777777777777777777777
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHh------CCCc-HHHHHHhccCchHHHhhhhhccccccccc-ccCCCc
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILEL------DPNN-RDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQP 215 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~------~p~~-~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~ 215 (229)
+.++..+|.++...|++++|+..|+++++. +|++ ..++..++.++ .+.+++.+|++.+.+++ ++|++.
T Consensus 475 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~~~~~~p~~~ 550 (597)
T 2xpi_A 475 PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAY-RKLKMYDAAIDALNQGLLLSTNDA 550 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHSSCCH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHhCCCCh
Confidence 777777777777777777777777777766 5543 56677777776 66677777777777776 666543
No 63
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.81 E-value=8.2e-19 Score=151.34 Aligned_cols=157 Identities=10% Similarity=0.054 Sum_probs=141.2
Q ss_pred ccchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC
Q psy13014 4 LPYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 4 ~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
-.|+++++.+|++..+++.+|.++... |++++|...+++++ ...|.++.++..+|.++...|+
T Consensus 10 ~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~lg~~~~~~g~ 72 (568)
T 2vsy_A 10 LQLRAAVRHRPQDFVAWLMLADAELGM-GDTTAGEMAVQRGL----------------ALHPGHPEAVARLGRVRWTQQR 72 (568)
T ss_dssp -----------CCHHHHHHHHHHHHHH-TCHHHHHHHHHHHH----------------TTSTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHCCC
Confidence 458899999999999999999999999 99999999999998 5678889999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc---
Q psy13014 84 WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQS--- 160 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~--- 160 (229)
+++|+..|+++++++|++ ..++.++|.+ +..+|++++|++.++++++++|++..++.++|.++..+
T Consensus 73 ~~~A~~~~~~al~~~p~~-----~~~~~~la~~------~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 141 (568)
T 2vsy_A 73 HAEAAVLLQQASDAAPEH-----PGIALWLGHA------LEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDW 141 (568)
T ss_dssp HHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcc
Confidence 999999999999999999 9999999999 99999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhCCCcHHHHHHhc
Q psy13014 161 DKLDEALADYQKILELDPNNRDAYVATK 188 (229)
Q Consensus 161 ~~~~~A~~~~~~al~~~p~~~~~~~~l~ 188 (229)
|++++|+..++++++.+|++...+..++
T Consensus 142 g~~~~A~~~~~~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 142 RALDVLSAQVRAAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp TTHHHHHHHHHHHHHHTCCCSCHHHHTT
T ss_pred ccHHHHHHHHHHHHhcCCcccChHHHhC
Confidence 9999999999999999999988888887
No 64
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.81 E-value=1.4e-19 Score=136.82 Aligned_cols=156 Identities=12% Similarity=0.019 Sum_probs=133.7
Q ss_pred cchhhcccCCchHHHHHH----------------HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy13014 5 PYQQELSKNPSFLYTIYF----------------SCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTA 68 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~----------------~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (229)
.|+++++.+|+++.+++. +|.++... |++++|...|++++ ...|.++
T Consensus 26 ~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~ 88 (208)
T 3urz_A 26 YFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKN-RNYDKAYLFYKELL----------------QKAPNNV 88 (208)
T ss_dssp HHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCH
T ss_pred HHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHC-CCHHHHHHHHHHHH----------------HHCCCCH
Confidence 478899999999999999 99999999 99999999999998 6778899
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCC--hHHHHHHHHHHHhcCCCc
Q psy13014 69 ISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEK--PDQSILACSKAITLNPSY 146 (229)
Q Consensus 69 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~--~~~A~~~~~~al~~~p~~ 146 (229)
.+++.+|.++...|++++|+..|++++.++|++ +.+++++|.+ ++..|+ ...+...+.+++...| .
T Consensus 89 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-----~~a~~~lg~~------~~~~~~~~~~~~~~~~~~~~~~~~-~ 156 (208)
T 3urz_A 89 DCLEACAEMQVCRGQEKDALRMYEKILQLEADN-----LAANIFLGNY------YYLTAEQEKKKLETDYKKLSSPTK-M 156 (208)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHHHHHHHHHHHHHC---CCCH-H
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----HHHHHHHHHH------HHHHhHHHHHHHHHHHHHHhCCCc-h
Confidence 999999999999999999999999999999999 9999999999 876654 4566778888765433 3
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccC
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVS 190 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 190 (229)
..+++++|.++...|++++|+.+|+++++++|+.. +...+..+
T Consensus 157 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~~-~~~~l~~i 199 (208)
T 3urz_A 157 QYARYRDGLSKLFTTRYEKARNSLQKVILRFPSTE-AQKTLDKI 199 (208)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCHH-HHHHHHHH
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCHH-HHHHHHHH
Confidence 45788999999999999999999999999999754 44444443
No 65
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.81 E-value=5.7e-19 Score=123.19 Aligned_cols=111 Identities=23% Similarity=0.397 Sum_probs=101.5
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
..++.+.++..+|..++..|+|++|+.+|++++.++|++ +.+|.++|.+ +..+|++++|+.+|++++++
T Consensus 3 ~~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~-----~~~~~nlg~~------~~~~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 3 AMTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSN-----ITFYNNKAAV------YFEEKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHhHHHH------HHHhhhHHHHHHHHHHHHHh
Confidence 346778889999999999999999999999999999999 9999999999 99999999999999999999
Q ss_pred CCCc-------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHH
Q psy13014 143 NPSY-------LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYV 185 (229)
Q Consensus 143 ~p~~-------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 185 (229)
+|++ ..+++++|.++..+|++++|+..|+++++..|+ ++...
T Consensus 72 ~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~ 120 (127)
T 4gcn_A 72 GRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVK 120 (127)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHH
T ss_pred CcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHH
Confidence 8765 358999999999999999999999999999885 44433
No 66
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.81 E-value=1.1e-19 Score=130.30 Aligned_cols=121 Identities=16% Similarity=0.150 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-------CCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHH
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPR-------SCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACS 137 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-------~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~ 137 (229)
...+..+...|..++..|+|++|+..|+++++++|+ +.....+.+|.++|.+ +..+|+|++|+.+|+
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~a------l~~Lgr~~eAl~~~~ 81 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEA------LAGLRSFDEALHSAD 81 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHH------HHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHH------HHHCCCHHHHHHHHH
Confidence 346678899999999999999999999999999998 4111234599999999 999999999999999
Q ss_pred HHHhc-------CCCcHHHH----HHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 138 KAITL-------NPSYLKVY----QRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 138 ~al~~-------~p~~~~~~----~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
++|++ +|++..+| +++|.++..+|++++|+.+|+++++++|++......+..+.
T Consensus 82 kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~ 146 (159)
T 2hr2_A 82 KALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMM 146 (159)
T ss_dssp HHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHH
T ss_pred HHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 99999 99999999 99999999999999999999999999999988877777665
No 67
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.81 E-value=5.7e-20 Score=135.22 Aligned_cols=167 Identities=12% Similarity=0.039 Sum_probs=144.0
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Q psy13014 13 NPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYN 92 (229)
Q Consensus 13 ~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~ 92 (229)
||+....++..|..+... |++++|...|++++ ...|.++.+++.+|.++...|++++|+..++
T Consensus 2 ~~~~~~~~~~~a~~~~~~-g~~~~A~~~~~~al----------------~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~ 64 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQ-GEHAQALNVIQTLS----------------DELQSRGDVKLAKADCLLETKQFELAQELLA 64 (176)
T ss_dssp ----CTTHHHHHHHHHHT-TCHHHHHHHHHTSC----------------HHHHTSHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HHCCCcHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 566667788999999999 99999999999887 6789999999999999999999999999999
Q ss_pred HHHHhCCCCCchhhHHHHHhHhhhhhhhHHhh-ccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHH
Q psy13014 93 EALRSCPRSCSVSRAVFYANRSAALEKLASYL-SLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQ 171 (229)
Q Consensus 93 ~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~ 171 (229)
+++...| + +..+..++.+ .. ..+...+|+..++++++.+|+++.+++.+|.++...|++++|+..|+
T Consensus 65 ~a~~~~p-~-----~~~~~~~~~~------~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~ 132 (176)
T 2r5s_A 65 TIPLEYQ-D-----NSYKSLIAKL------ELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLW 132 (176)
T ss_dssp TCCGGGC-C-----HHHHHHHHHH------HHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhhhccC-C-----hHHHHHHHHH------HHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 9999999 7 7666666644 32 23344568999999999999999999999999999999999999999
Q ss_pred HHHHhCCCc--HHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 172 KILELDPNN--RDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 172 ~al~~~p~~--~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
++++.+|+. ..++.+++.++ ..+++..+|+..|.+++
T Consensus 133 ~~l~~~p~~~~~~a~~~l~~~~-~~~g~~~~A~~~y~~al 171 (176)
T 2r5s_A 133 NILKVNLGAQDGEVKKTFMDIL-SALGQGNAIASKYRRQL 171 (176)
T ss_dssp HHHTTCTTTTTTHHHHHHHHHH-HHHCSSCHHHHHHHHHH
T ss_pred HHHHhCcccChHHHHHHHHHHH-HHhCCCCcHHHHHHHHH
Confidence 999999986 56999999998 88888888888887664
No 68
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.81 E-value=5.9e-19 Score=125.30 Aligned_cols=119 Identities=14% Similarity=0.081 Sum_probs=112.3
Q ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 62 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
...|.+...++.+|..++..|++++|+..|++++..+|.+ +.+|..+|.+ +...|++++|+.+|++++.
T Consensus 12 ~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 12 GLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYD-----ARYFLGLGAC------RQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp TCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCcc-----HHHHHHHHHH------HHHHhhHHHHHHHHHHHHh
Confidence 5678899999999999999999999999999999999999 9999999999 9999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 142 LNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 142 ~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
++|+++.+++.+|.++..+|++++|+..|+++++++|+++........+.
T Consensus 81 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 130 (142)
T 2xcb_A 81 MDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAG 130 (142)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999887766555554
No 69
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.80 E-value=2.1e-19 Score=143.63 Aligned_cols=188 Identities=9% Similarity=0.037 Sum_probs=121.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHh------hhhh-------hhhHHHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFIL------FSEI-------RTDCHQFERQVFYIQFIFHVLFYLFCSQ-KLEQTAIS 70 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~------~~~~-------~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 70 (229)
.|++++..+|+++.+++.+|.++... .|++ ++|...|++++ . ..|.+..+
T Consensus 38 ~~~~al~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl----------------~~~~p~~~~~ 101 (308)
T 2ond_A 38 AYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAI----------------STLLKKNMLL 101 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHH----------------TTTTTTCHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHH----------------HHhCcccHHH
Confidence 68899999999999999999887632 1665 88999998888 3 35666777
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHH-HHHhHhhhhhhhHH---------------------------
Q psy13014 71 LKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAV-FYANRSAALEKLAS--------------------------- 122 (229)
Q Consensus 71 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~-~~~~lg~~~~~~~~--------------------------- 122 (229)
|..+|..+...|++++|...|++++++.|.+ +. +|..+|.++.++|.
T Consensus 102 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~ 176 (308)
T 2ond_A 102 YFAYADYEESRMKYEKVHSIYNRLLAIEDID-----PTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAAL 176 (308)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTSSSSC-----THHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhccccC-----ccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 7788888888888888888888888877776 54 67777777222221
Q ss_pred -hh-ccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHh---CCC-cHHHHHHhccCchHHHh
Q psy13014 123 -YL-SLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILEL---DPN-NRDAYVATKVSPDLKLK 196 (229)
Q Consensus 123 -~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~---~p~-~~~~~~~l~~~~~~~~~ 196 (229)
.. ..|++++|+..|+++++.+|+++.+|..+|.++...|++++|+..|++++.. +|+ ...+|..++.+. .+.+
T Consensus 177 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~-~~~g 255 (308)
T 2ond_A 177 MEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFE-SNIG 255 (308)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHH-HHHS
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHH-HHcC
Confidence 11 1355555555555555555555555555555555555555555555555553 332 444555555554 4455
Q ss_pred hhhhccccccccc-ccCCC
Q psy13014 197 EKNGATKLSPDVF-LHPGQ 214 (229)
Q Consensus 197 ~~~~a~~~~~~~~-~~p~~ 214 (229)
+..++...+.+++ ..|++
T Consensus 256 ~~~~a~~~~~~a~~~~p~~ 274 (308)
T 2ond_A 256 DLASILKVEKRRFTAFREE 274 (308)
T ss_dssp CHHHHHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHHHHcccc
Confidence 5555555555555 55543
No 70
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.80 E-value=4.7e-19 Score=141.60 Aligned_cols=167 Identities=7% Similarity=-0.001 Sum_probs=128.6
Q ss_pred cchhhcc-cCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH-----HHH---HHHH-----------hhhhhhhH
Q psy13014 5 PYQQELS-KNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQ-----FIF---HVLF-----------YLFCSQKL 64 (229)
Q Consensus 5 ~~~~~l~-~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-----~~~---~~~~-----------~~~~~~~~ 64 (229)
.|+++++ ++|++..++..+|.++... |++++|...|++++...+ ... .... +.......
T Consensus 86 ~~~rAl~~~~p~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 164 (308)
T 2ond_A 86 IYERAISTLLKKNMLLYFAYADYEESR-MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDA 164 (308)
T ss_dssp HHHHHHTTTTTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTST
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHhc-CCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 4678888 6899998999999888888 899999988888764211 000 0000 00111222
Q ss_pred HHHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-
Q psy13014 65 EQTAISLKDEGNALFR-LNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL- 142 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~- 142 (229)
|....++...+..... .|++++|+..|++++..+|++ +.+|..+|.. +..+|++++|+..|++++..
T Consensus 165 p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~------~~~~g~~~~A~~~~~~al~~~ 233 (308)
T 2ond_A 165 RTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDI-----PEYVLAYIDY------LSHLNEDNNTRVLFERVLTSG 233 (308)
T ss_dssp TCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTC-----HHHHHHHHHH------HHTTCCHHHHHHHHHHHHHSS
T ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHH------HHHCCCHHHHHHHHHHHHhcc
Confidence 3334455545544433 699999999999999999998 9999999999 99999999999999999996
Q ss_pred --CCC-cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHH
Q psy13014 143 --NPS-YLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDA 183 (229)
Q Consensus 143 --~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 183 (229)
.|+ ....|..++..+...|++++|...++++++..|++...
T Consensus 234 ~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~~~~~ 277 (308)
T 2ond_A 234 SLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFREEYEG 277 (308)
T ss_dssp SSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTTSS
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccccccc
Confidence 553 78899999999999999999999999999999986643
No 71
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.80 E-value=7.8e-20 Score=154.43 Aligned_cols=181 Identities=16% Similarity=0.181 Sum_probs=144.7
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWS 85 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (229)
|+++++.+|+ ..+++.+|.++... |++++|...+++++ ...|.++.++..+|.++...|+++
T Consensus 260 ~~~~l~~~~~-~~~~~~l~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~~~~~ 321 (514)
T 2gw1_A 260 IKKAIELFPR-VNSYIYMALIMADR-NDSTEYYNYFDKAL----------------KLDSNNSSVYYHRGQMNFILQNYD 321 (514)
T ss_dssp HHHHHHHCCC-HHHHHHHHHHHHTS-SCCTTGGGHHHHHH----------------TTCTTCTHHHHHHHHHHHHTTCTT
T ss_pred HHHHHhhCcc-HHHHHHHHHHHHHC-CCHHHHHHHHHHHh----------------hcCcCCHHHHHHHHHHHHHhCCHH
Confidence 4445555555 55555555555555 55555555555554 445666778888999999999999
Q ss_pred HHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHH
Q psy13014 86 ESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDE 165 (229)
Q Consensus 86 ~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~ 165 (229)
+|+..|++++...|.+ ..++..+|.+ +...|++++|+..++++++..|+++.++..+|.++...|++++
T Consensus 322 ~A~~~~~~~~~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 390 (514)
T 2gw1_A 322 QAGKDFDKAKELDPEN-----IFPYIQLACL------AYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDK 390 (514)
T ss_dssp HHHHHHHHHHHTCSSC-----SHHHHHHHHH------TTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHhChhh-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHH
Confidence 9999999999998888 8888899999 8899999999999999999999988999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHH------HHHHhccCchHH---Hhhhhhccccccccc-ccCCCcc
Q psy13014 166 ALADYQKILELDPNNRD------AYVATKVSPDLK---LKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 166 A~~~~~~al~~~p~~~~------~~~~l~~~~~~~---~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
|+..+++++..+|+++. ++..++.++ .. .+++.+|+..+.+++ .+|++..
T Consensus 391 A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 450 (514)
T 2gw1_A 391 ALKQYDLAIELENKLDGIYVGIAPLVGKATLL-TRNPTVENFIEATNLLEKASKLDPRSEQ 450 (514)
T ss_dssp HHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHH-HTSCCTTHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHhhhccchHHHHHHHHHHHHHHH-hhhhhcCCHHHHHHHHHHHHHhCcccHH
Confidence 99999999998888865 888888888 67 888889999888888 7776543
No 72
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.80 E-value=2.6e-19 Score=141.93 Aligned_cols=169 Identities=12% Similarity=-0.042 Sum_probs=156.3
Q ss_pred cCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHH
Q psy13014 12 KNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKY 91 (229)
Q Consensus 12 ~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~ 91 (229)
.-|++...++.+|..+... |++++|...|++++ ...|+++.+++.+|.++...|++++|+..+
T Consensus 112 ~lp~~~~~~~~~a~~~~~~-g~~~~A~~~~~~al----------------~~~P~~~~a~~~la~~~~~~g~~~~A~~~l 174 (287)
T 3qou_A 112 VLPREEELXAQQAMQLMQE-SNYTDALPLLXDAW----------------QLSNQNGEIGLLLAETLIALNRSEDAEAVL 174 (287)
T ss_dssp HSCCHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHTTSCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HcCCchhhHHHHHHHHHhC-CCHHHHHHHHHHHH----------------HhCCcchhHHHHHHHHHHHCCCHHHHHHHH
Confidence 3488999999999999999 99999999999988 678889999999999999999999999999
Q ss_pred HHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHH
Q psy13014 92 NEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQ 171 (229)
Q Consensus 92 ~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~ 171 (229)
++++..+|+. ...+...+.. +...++.++|+..+++++..+|+++.+++.+|.++...|++++|+..|.
T Consensus 175 ~~~~~~~p~~-----~~~~~~~~~~------l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~ 243 (287)
T 3qou_A 175 XTIPLQDQDT-----RYQGLVAQIE------LLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF 243 (287)
T ss_dssp TTSCGGGCSH-----HHHHHHHHHH------HHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhCchhhcch-----HHHHHHHHHH------HHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 9999999976 7777778888 8888999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCc--HHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 172 KILELDPNN--RDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 172 ~al~~~p~~--~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
++++.+|++ ..++..++.++ ..+++..++...|.+.+
T Consensus 244 ~~l~~~p~~~~~~a~~~l~~~~-~~~g~~~~a~~~~r~al 282 (287)
T 3qou_A 244 GHLRXDLTAADGQTRXTFQEIL-AALGTGDALASXYRRQL 282 (287)
T ss_dssp HHHHHCTTGGGGHHHHHHHHHH-HHHCTTCHHHHHHHHHH
T ss_pred HHHhcccccccchHHHHHHHHH-HHcCCCCcHHHHHHHHH
Confidence 999999999 88999999998 88888888888777654
No 73
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.79 E-value=1.1e-18 Score=126.81 Aligned_cols=126 Identities=23% Similarity=0.345 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
..+..+..++.+|.+++..|++++|+..|++++.++|.+ +.++.++|.+ +..+|++++|+.+|++++++
T Consensus 6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~l~~~------~~~~g~~~~A~~~~~~al~~ 74 (164)
T 3sz7_A 6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPAN-----PIYLSNRAAA------YSASGQHEKAAEDAELATVV 74 (164)
T ss_dssp SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcC-----HHHHHHHHHH------HHHccCHHHHHHHHHHHHHh
Confidence 446788899999999999999999999999999999999 9999999999 99999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCch-HHHhhhh
Q psy13014 143 NPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPD-LKLKEKN 199 (229)
Q Consensus 143 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~~~ 199 (229)
+|+++.+++++|.++..+|++++|+.+|+++++++|++..++...+.... .++++..
T Consensus 75 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~ 132 (164)
T 3sz7_A 75 DPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEAN 132 (164)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986665554431 4444433
No 74
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.79 E-value=5e-19 Score=152.69 Aligned_cols=156 Identities=10% Similarity=0.040 Sum_probs=133.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHH
Q psy13014 32 SEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYA 111 (229)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 111 (229)
|++++|...+++++ ...|.++.++..+|.++...|++++|+..|+++++++|++ ..++.
T Consensus 3 g~~~~A~~~~~~al----------------~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~ 61 (568)
T 2vsy_A 3 ADGPRELLQLRAAV----------------RHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGH-----PEAVA 61 (568)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTC-----HHHHH
T ss_pred ccHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHH
Confidence 77888888888877 5678888999999999999999999999999999999999 99999
Q ss_pred hHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 112 NRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 112 ~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
++|.+ +..+|++++|+.+++++++++|++..+++++|.++...|++++|+..|+++++++|++..++.+++.++
T Consensus 62 ~lg~~------~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 135 (568)
T 2vsy_A 62 RLGRV------RWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWR 135 (568)
T ss_dssp HHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHH------HHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999 999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHH---hhhhhccccccccc-ccCCCc
Q psy13014 192 DLKL---KEKNGATKLSPDVF-LHPGQP 215 (229)
Q Consensus 192 ~~~~---~~~~~a~~~~~~~~-~~p~~~ 215 (229)
... ++..+|...+.+++ .+|.+.
T Consensus 136 -~~~~~~g~~~~A~~~~~~al~~~p~~~ 162 (568)
T 2vsy_A 136 -RRLCDWRALDVLSAQVRAAVAQGVGAV 162 (568)
T ss_dssp -HHTTCCTTHHHHHHHHHHHHHHTCCCS
T ss_pred -HHhhccccHHHHHHHHHHHHhcCCccc
Confidence 788 89999999999999 888654
No 75
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.78 E-value=1.2e-18 Score=135.83 Aligned_cols=176 Identities=14% Similarity=0.119 Sum_probs=150.7
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Q psy13014 13 NPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYN 92 (229)
Q Consensus 13 ~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~ 92 (229)
+|....++..+|.++... |++++|...+++++...... .....+..+.++..+|.++...|++++|+.+|+
T Consensus 39 ~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 109 (283)
T 3edt_B 39 HPDVATMLNILALVYRDQ-NKYKEAAHLLNDALAIREKT--------LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCK 109 (283)
T ss_dssp SHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHH--------TCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHH--------cCCcchHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 477888999999999999 99999999999887432200 002347888999999999999999999999999
Q ss_pred HHHHhC--------CCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc--------CCCcHHHHHHHHHH
Q psy13014 93 EALRSC--------PRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL--------NPSYLKVYQRRARL 156 (229)
Q Consensus 93 ~al~~~--------p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~ 156 (229)
+++... |.. ..++.++|.+ +...|++++|+.++++++.+ .|....++..+|.+
T Consensus 110 ~al~~~~~~~~~~~~~~-----~~~~~~la~~------~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 178 (283)
T 3edt_B 110 RALEIREKVLGKFHPDV-----AKQLNNLALL------CQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASC 178 (283)
T ss_dssp HHHHHHHHHHCTTCHHH-----HHHHHHHHHH------HHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCChHH-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 999983 444 8899999999 99999999999999999998 77778899999999
Q ss_pred HHhcccHHHHHHHHHHHHHh-------------------------------------------------CCCcHHHHHHh
Q psy13014 157 YQQSDKLDEALADYQKILEL-------------------------------------------------DPNNRDAYVAT 187 (229)
Q Consensus 157 ~~~~~~~~~A~~~~~~al~~-------------------------------------------------~p~~~~~~~~l 187 (229)
+...|++++|+..+++++++ .|....++..+
T Consensus 179 ~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 258 (283)
T 3edt_B 179 YLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSL 258 (283)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 99999999999999999986 24555678888
Q ss_pred ccCchHHHhhhhhccccccccc
Q psy13014 188 KVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 188 ~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
+.++ ...+++.+|...+.+++
T Consensus 259 a~~~-~~~g~~~~A~~~~~~al 279 (283)
T 3edt_B 259 GALY-RRQGKLEAAHTLEDCAS 279 (283)
T ss_dssp HHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHH-HHcCCHHHHHHHHHHHH
Confidence 8888 78888888888887765
No 76
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.78 E-value=1.5e-18 Score=145.69 Aligned_cols=183 Identities=9% Similarity=0.006 Sum_probs=129.2
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHc----
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRL---- 81 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---- 81 (229)
|++++..+|+++.++..+|.++... |++++|...+++++ ...|+++.++..+|.++...
T Consensus 236 ~~~al~~~~~~~~~~~~lg~~~~~~-~~~~~A~~~~~~al----------------~~~p~~~~~~~~lg~~y~~~~~~~ 298 (472)
T 4g1t_A 236 VEEALEKAPGVTDVLRSAAKFYRRK-DEPDKAIELLKKAL----------------EYIPNNAYLHCQIGCCYRAKVFQV 298 (472)
T ss_dssp HHHHHHHCSSCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCccHHHHHHHHHHHHHHc-CchHHHHHHHHHHH----------------HhCCChHHHHHHHHHHHHHHHHHh
Confidence 3445555555555555555555555 66666665555554 56677788888888887543
Q ss_pred ---------------cCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc
Q psy13014 82 ---------------NQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 82 ---------------~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 146 (229)
+.+++|+..+++++.++|.. ..++..+|.+ +...|++++|+.+|+++++++|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~lg~~------~~~~~~~~~A~~~~~kaL~~~~~~ 367 (472)
T 4g1t_A 299 MNLRENGMYGKRKLLELIGHAVAHLKKADEANDNL-----FRVCSILASL------HALADQYEEAEYYFQKEFSKELTP 367 (472)
T ss_dssp HHC------CHHHHHHHHHHHHHHHHHHHHHCTTT-----CCCHHHHHHH------HHHTTCHHHHHHHHHHHHHSCCCH
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCch-----hhhhhhHHHH------HHHhccHHHHHHHHHHHHhcCCCC
Confidence 45789999999999999998 8899999999 999999999999999999999887
Q ss_pred HH---HHHHHHHH-HHhcccHHHHHHHHHHHHHh------------------------CCCcHHHHHHhccCchHHHhhh
Q psy13014 147 LK---VYQRRARL-YQQSDKLDEALADYQKILEL------------------------DPNNRDAYVATKVSPDLKLKEK 198 (229)
Q Consensus 147 ~~---~~~~la~~-~~~~~~~~~A~~~~~~al~~------------------------~p~~~~~~~~l~~~~~~~~~~~ 198 (229)
.. .++.+|.+ +...|++++|+..|++++++ +|+++.++.++|.++ ...+++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~-~~~g~~ 446 (472)
T 4g1t_A 368 VAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQKSREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQ-ELNEKM 446 (472)
T ss_dssp HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHH-HHHHHC
T ss_pred hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHcCCH
Confidence 54 46667654 45789999999999998876 466778899999999 889999
Q ss_pred hhccccccccc-ccCCCccc
Q psy13014 199 NGATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 199 ~~a~~~~~~~~-~~p~~~~~ 217 (229)
.+|++.|++++ +.|.++..
T Consensus 447 ~~A~~~y~kALe~~~~~p~a 466 (472)
T 4g1t_A 447 QQADEDSERGLESGSLIPSA 466 (472)
T ss_dssp C-------------------
T ss_pred HHHHHHHHHHHhcCCCCCcH
Confidence 99999999999 88866543
No 77
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.78 E-value=1.2e-17 Score=115.18 Aligned_cols=124 Identities=34% Similarity=0.542 Sum_probs=117.4
Q ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 62 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
...+..+..+..+|..+...|++++|+..|++++...|.+ +.++..+|.+ +...|++++|+..+++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~ 74 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPAN-----AVYFCNRAAA------YSKLGNYAGAVQDCERAIC 74 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCC-----HHHHHHHHHH------HHHhhchHHHHHHHHHHHh
Confidence 4667889999999999999999999999999999999998 9999999999 9999999999999999999
Q ss_pred cCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhh
Q psy13014 142 LNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKE 197 (229)
Q Consensus 142 ~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 197 (229)
.+|+++.+++.+|.++...|++++|+..|+++++++|++..++..++.++ ..+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~-~~~~~ 129 (131)
T 2vyi_A 75 IDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAE-LKLRE 129 (131)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH-HHHTT
T ss_pred cCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHH-HHHhc
Confidence 99999999999999999999999999999999999999999999999887 55554
No 78
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.78 E-value=3.8e-18 Score=135.40 Aligned_cols=179 Identities=12% Similarity=0.051 Sum_probs=144.7
Q ss_pred HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Q psy13014 20 IYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCP 99 (229)
Q Consensus 20 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p 99 (229)
+...|.++... |++++|...|.+++..... ....+..+.++..+|.++..+|++++|+.+|++++.+.|
T Consensus 40 ~~~a~~~~~~~-g~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~ 108 (292)
T 1qqe_A 40 CVQAATIYRLR-KELNLAGDSFLKAADYQKK----------AGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFT 108 (292)
T ss_dssp HHHHHHHHHHT-TCTHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCHHHHHHHHHHHHHHHHH----------hCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 33445667777 9999999999888743220 123345678999999999999999999999999999987
Q ss_pred CCCchh-hHHHHHhHhhhhhhhHHhhcc-CChHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhcccHHHHHHHHH
Q psy13014 100 RSCSVS-RAVFYANRSAALEKLASYLSL-EKPDQSILACSKAITLNPSY------LKVYQRRARLYQQSDKLDEALADYQ 171 (229)
Q Consensus 100 ~~~~~~-~~~~~~~lg~~~~~~~~~~~~-~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~ 171 (229)
...... .+.++.++|.+ |... |++++|+.+|++++++.|.+ ..++.++|.++..+|++++|+..|+
T Consensus 109 ~~g~~~~~a~~~~~lg~~------~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 182 (292)
T 1qqe_A 109 HRGQFRRGANFKFELGEI------LENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYS 182 (292)
T ss_dssp HTTCHHHHHHHHHHHHHH------HHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHH------HHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 543322 35689999999 9995 99999999999999998754 5679999999999999999999999
Q ss_pred HHHHhCCCcHH-------HHHHhccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 172 KILELDPNNRD-------AYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 172 ~al~~~p~~~~-------~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
+++.+.|++.. .+.+++.++ ..+++..+|+..+.+++ ++|+...
T Consensus 183 ~al~~~~~~~~~~~~~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~l~p~~~~ 234 (292)
T 1qqe_A 183 KLIKSSMGNRLSQWSLKDYFLKKGLCQ-LAATDAVAAARTLQEGQSEDPNFAD 234 (292)
T ss_dssp HHHHTTSSCTTTGGGHHHHHHHHHHHH-HHTTCHHHHHHHHHGGGCC------
T ss_pred HHHHHHhcCCcccHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhhCCCCCC
Confidence 99999998754 568888888 88999999999999999 8996543
No 79
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.77 E-value=1e-17 Score=130.39 Aligned_cols=158 Identities=13% Similarity=0.069 Sum_probs=139.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHH
Q psy13014 32 SEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYA 111 (229)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 111 (229)
|++++|...|++.+... ....+..+.+++.+|.++...|++++|+..|++++..+|.+ +.++.
T Consensus 19 ~~~~~A~~~~~~~~~~~------------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~ 81 (275)
T 1xnf_A 19 LQQEVILARMEQILASR------------ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDM-----PEVFN 81 (275)
T ss_dssp HHHHHHHHHHHHHHTSS------------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC-----HHHHH
T ss_pred chHHHHHHHHHHHHhcc------------cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCc-----HHHHH
Confidence 78888888888877210 01257889999999999999999999999999999999999 99999
Q ss_pred hHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 112 NRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 112 ~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
.+|.+ +...|++++|+.+|+++++++|+++.++..+|.++...|++++|+..|+++++++|++......++.+
T Consensus 82 ~la~~------~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~- 154 (275)
T 1xnf_A 82 YLGIY------LTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA- 154 (275)
T ss_dssp HHHHH------HHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-
T ss_pred HHHHH------HHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-
Confidence 99999 99999999999999999999999999999999999999999999999999999999999776666543
Q ss_pred hHHHhhhhhccccccccc-ccCCC
Q psy13014 192 DLKLKEKNGATKLSPDVF-LHPGQ 214 (229)
Q Consensus 192 ~~~~~~~~~a~~~~~~~~-~~p~~ 214 (229)
...++..+|+..+.+++ ..|.+
T Consensus 155 -~~~~~~~~A~~~~~~~~~~~~~~ 177 (275)
T 1xnf_A 155 -EQKLDEKQAKEVLKQHFEKSDKE 177 (275)
T ss_dssp -HHHHCHHHHHHHHHHHHHHSCCC
T ss_pred -HHhcCHHHHHHHHHHHHhcCCcc
Confidence 45688889998888777 66644
No 80
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.77 E-value=1.5e-18 Score=137.73 Aligned_cols=193 Identities=10% Similarity=-0.039 Sum_probs=146.9
Q ss_pred cchhhcccCC------chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q psy13014 5 PYQQELSKNP------SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNAL 78 (229)
Q Consensus 5 ~~~~~l~~~p------~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 78 (229)
.|++++++.+ ....++..+|.++... |++++|+.+|++++...+. .......+.++..+|.++
T Consensus 59 ~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~-g~~~~A~~~~~~Al~l~~~----------~g~~~~~a~~~~~lg~~~ 127 (292)
T 1qqe_A 59 SFLKAADYQKKAGNEDEAGNTYVEAYKCFKSG-GNSVNAVDSLENAIQIFTH----------RGQFRRGANFKFELGEIL 127 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHH
Confidence 4566666532 2256888999999999 9999999999998853321 112334567899999999
Q ss_pred HHc-cCHHHHHHHHHHHHHhCCCCCch-hhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH-------H
Q psy13014 79 FRL-NQWSESLAKYNEALRSCPRSCSV-SRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK-------V 149 (229)
Q Consensus 79 ~~~-~~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-------~ 149 (229)
... |++++|+.+|++++.+.|..... ....++.++|.+ +..+|++++|+.+|++++.+.|++.. +
T Consensus 128 ~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 201 (292)
T 1qqe_A 128 ENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADL------KALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDY 201 (292)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHH
T ss_pred HHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH------HHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHH
Confidence 996 99999999999999998754322 235678999999 99999999999999999999987643 6
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHH-----HHhccCch-HHHhhhhhccccccccc-ccCCC
Q psy13014 150 YQRRARLYQQSDKLDEALADYQKILELDPNNRDAY-----VATKVSPD-LKLKEKNGATKLSPDVF-LHPGQ 214 (229)
Q Consensus 150 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~-----~~l~~~~~-~~~~~~~~a~~~~~~~~-~~p~~ 214 (229)
+.++|.++..+|++++|+..|+++++++|+..... ..++..+. ...+++.+|++.|.++. ++|.+
T Consensus 202 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~~l~~~~ 273 (292)
T 1qqe_A 202 FLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWK 273 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSSCCCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCccHHHH
Confidence 88999999999999999999999999999877642 33333331 24456889999998888 88854
No 81
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=3.6e-18 Score=147.23 Aligned_cols=181 Identities=17% Similarity=0.127 Sum_probs=161.6
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhh----------hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSE----------IRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDE 74 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~----------~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (229)
.+.++++++|++..+|..++.++..+ ++ ++++...+++++ ...|++..+|...
T Consensus 51 ~~~~~l~~nP~~~taW~~R~~~l~~l-~~~~~~~~~~~~~~~eL~~~~~~l----------------~~~pK~y~aW~hR 113 (567)
T 1dce_A 51 LTSQILGANPDFATLWNCRREVLQHL-ETEKSPEESAALVKAELGFLESCL----------------RVNPKSYGTWHHR 113 (567)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHH-HTTSCHHHHHHHHHHHHHHHHHHH----------------HHCTTCHHHHHHH
T ss_pred HHHHHHHHCchhHHHHHHHHHHHHhc-ccccchhhhhhhHHHHHHHHHHHH----------------HhCCCCHHHHHHH
Confidence 36789999999999999999999998 87 788888888777 6889999999999
Q ss_pred HHHHHHcc--CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccC-ChHHHHHHHHHHHhcCCCcHHHHH
Q psy13014 75 GNALFRLN--QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLE-KPDQSILACSKAITLNPSYLKVYQ 151 (229)
Q Consensus 75 g~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~ 151 (229)
+.+....+ +++++++.++++++.+|.+ ..+|.+++.+ ....| .+++++++++++++.+|.+..+|+
T Consensus 114 ~w~l~~l~~~~~~~el~~~~k~l~~d~~N-----~~aW~~R~~~------l~~l~~~~~~el~~~~~~I~~~p~n~saW~ 182 (567)
T 1dce_A 114 CWLLSRLPEPNWARELELCARFLEADERN-----FHCWDYRRFV------AAQAAVAPAEELAFTDSLITRNFSNYSSWH 182 (567)
T ss_dssp HHHHHTCSSCCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTCCCHHHHHHHHHTTTTTTCCCHHHHH
T ss_pred HHHHHHcccccHHHHHHHHHHHHhhcccc-----ccHHHHHHHH------HHHcCCChHHHHHHHHHHHHHCCCCccHHH
Confidence 99999999 7799999999999999999 9999999999 99999 899999999999999999999999
Q ss_pred HHHHHHHhc--------------ccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhh------------ccccc
Q psy13014 152 RRARLYQQS--------------DKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNG------------ATKLS 205 (229)
Q Consensus 152 ~la~~~~~~--------------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~------------a~~~~ 205 (229)
.++.++..+ +.++++++++.+++.++|++..+|..++.++ .+.+...+ |+..|
T Consensus 183 ~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll-~~~~~~~~~~~~~~~~~~~~~~~~f 261 (567)
T 1dce_A 183 YRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLL-GRAEPHDVLCCVHVSREEACLSVCF 261 (567)
T ss_dssp HHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHH-SCCCCCSCEEEEEEETTTTEEEEEE
T ss_pred HHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHH-hcCCCccceeeeeeccCCceEEEEe
Confidence 999999885 7799999999999999999999999999888 55444333 45557
Q ss_pred cccc-ccCCC
Q psy13014 206 PDVF-LHPGQ 214 (229)
Q Consensus 206 ~~~~-~~p~~ 214 (229)
.+++ ++|..
T Consensus 262 ~~~i~~~~~~ 271 (567)
T 1dce_A 262 SRPLTVGSRM 271 (567)
T ss_dssp EEEECTTBTT
T ss_pred ccceeccccc
Confidence 7777 66653
No 82
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.77 E-value=5.1e-17 Score=112.38 Aligned_cols=134 Identities=25% Similarity=0.364 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 18 YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
.+++.+|.++... |++++|...+++.+ ...+.++..+..+|.++...|++++|+..+++++..
T Consensus 2 ~~~~~l~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 64 (136)
T 2fo7_A 2 EAWYNLGNAYYKQ-GDYDEAIEYYQKAL----------------ELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 64 (136)
T ss_dssp HHHHHHHHHHHHH-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHc-CcHHHHHHHHHHHH----------------HcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4577788888888 99999998888776 344556778888999999999999999999999999
Q ss_pred CCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy13014 98 CPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELD 177 (229)
Q Consensus 98 ~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 177 (229)
.|.+ ..++..+|.+ +...|++++|+..+++++...|.+..++..+|.++...|++++|+..+++++..+
T Consensus 65 ~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 133 (136)
T 2fo7_A 65 DPRS-----AEAWYNLGNA------YYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 133 (136)
T ss_dssp CTTC-----HHHHHHHHHH------HHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHS
T ss_pred CCCc-----hHHHHHHHHH------HHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccC
Confidence 8888 8888999999 9999999999999999999999999999999999999999999999999999888
Q ss_pred CC
Q psy13014 178 PN 179 (229)
Q Consensus 178 p~ 179 (229)
|+
T Consensus 134 ~~ 135 (136)
T 2fo7_A 134 PR 135 (136)
T ss_dssp TT
T ss_pred CC
Confidence 86
No 83
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.77 E-value=3.4e-18 Score=121.32 Aligned_cols=133 Identities=13% Similarity=-0.009 Sum_probs=116.8
Q ss_pred CccchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHcc
Q psy13014 3 PLPYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLN 82 (229)
Q Consensus 3 ~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (229)
+-.|++++..+|++...++.+|.++... |++++|...|++++ ...|.++.+++.+|.++...|
T Consensus 4 ~~~l~~al~~~p~~~~~~~~~a~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~lg~~~~~~g 66 (142)
T 2xcb_A 4 GGTLAMLRGLSEDTLEQLYALGFNQYQA-GKWDDAQKIFQALC----------------MLDHYDARYFLGLGACRQSLG 66 (142)
T ss_dssp -----CCTTCCHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTT
T ss_pred chhHHHHHcCCHHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHH----------------HhCCccHHHHHHHHHHHHHHh
Confidence 4568999999999999999999999999 99999999999888 577889999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhccc
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDK 162 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~ 162 (229)
++++|+..|++++.++|++ +.+++++|.+ +..+|++++|+.+|+++++++|+++........+...++.
T Consensus 67 ~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~ 135 (142)
T 2xcb_A 67 LYEQALQSYSYGALMDINE-----PRFPFHAAEC------HLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEA 135 (142)
T ss_dssp CHHHHHHHHHHHHHHCTTC-----THHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCC-----cHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 9999999999999999999 9999999999 9999999999999999999999887766655555544444
Q ss_pred H
Q psy13014 163 L 163 (229)
Q Consensus 163 ~ 163 (229)
.
T Consensus 136 l 136 (142)
T 2xcb_A 136 V 136 (142)
T ss_dssp H
T ss_pred H
Confidence 3
No 84
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.77 E-value=3.5e-18 Score=122.37 Aligned_cols=123 Identities=9% Similarity=-0.030 Sum_probs=114.2
Q ss_pred CccchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHcc
Q psy13014 3 PLPYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLN 82 (229)
Q Consensus 3 ~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (229)
+-.|+++++.+|++..+++.+|.++... |++++|...|++++ ...|.++.+++.+|.++...|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~lg~~~~~~g 69 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQS-GXYEDAHXVFQALC----------------VLDHYDSRFFLGLGACRQAMG 69 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHc-CChHHHHHHHHHHH----------------HcCcccHHHHHHHHHHHHHHh
Confidence 4568999999999999999999999999 99999999999888 577889999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHH
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRR 153 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 153 (229)
++++|+..|++++.++|++ +.+++++|.+ +..+|++++|+.+|+++++++|+++.....+
T Consensus 70 ~~~~A~~~~~~al~l~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 129 (148)
T 2vgx_A 70 QYDLAIHSYSYGAVMDIXE-----PRFPFHAAEC------LLQXGELAEAESGLFLAQELIANXPEFXELS 129 (148)
T ss_dssp CHHHHHHHHHHHHHHSTTC-----THHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHTTCGGGHHHH
T ss_pred hHHHHHHHHHHHHhcCCCC-----chHHHHHHHH------HHHcCCHHHHHHHHHHHHHHCcCCCcchHHH
Confidence 9999999999999999999 9999999999 9999999999999999999999877654333
No 85
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.76 E-value=2e-18 Score=136.48 Aligned_cols=184 Identities=12% Similarity=0.086 Sum_probs=156.2
Q ss_pred cCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHH
Q psy13014 12 KNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKY 91 (229)
Q Consensus 12 ~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~ 91 (229)
.+|....++..+|.++... |++++|...+++++...... .....+..+.++..+|.++...|++++|+.++
T Consensus 64 ~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~al~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 134 (311)
T 3nf1_A 64 DHPDVATMLNILALVYRDQ-NKYKDAANLLNDALAIREKT--------LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLC 134 (311)
T ss_dssp SSHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHH--------HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHH--------hCCCChHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 3678888999999999999 99999999999887433200 00234778899999999999999999999999
Q ss_pred HHHHHhC-----CCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHH
Q psy13014 92 NEALRSC-----PRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL--------NPSYLKVYQRRARLYQ 158 (229)
Q Consensus 92 ~~al~~~-----p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~ 158 (229)
++++.+. +.. .....++..+|.+ +...|++++|+.++++++.+ .|....++..+|.++.
T Consensus 135 ~~a~~~~~~~~~~~~--~~~~~~~~~la~~------~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~ 206 (311)
T 3nf1_A 135 KRALEIREKVLGKDH--PDVAKQLNNLALL------CQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYL 206 (311)
T ss_dssp HHHHHHHHHHHCTTC--HHHHHHHHHHHHH------HHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCC--hHHHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 9999984 221 1237889999999 99999999999999999998 6777889999999999
Q ss_pred hcccHHHHHHHHHHHHHh-------------------------------------------------CCCcHHHHHHhcc
Q psy13014 159 QSDKLDEALADYQKILEL-------------------------------------------------DPNNRDAYVATKV 189 (229)
Q Consensus 159 ~~~~~~~A~~~~~~al~~-------------------------------------------------~p~~~~~~~~l~~ 189 (229)
..|++++|+..+++++++ +|....++..++.
T Consensus 207 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~ 286 (311)
T 3nf1_A 207 KQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGA 286 (311)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHH
Confidence 999999999999999984 4667788999999
Q ss_pred CchHHHhhhhhccccccccc-ccCC
Q psy13014 190 SPDLKLKEKNGATKLSPDVF-LHPG 213 (229)
Q Consensus 190 ~~~~~~~~~~~a~~~~~~~~-~~p~ 213 (229)
++ ...+++.+|.+.+.+++ +.|.
T Consensus 287 ~~-~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 287 LY-RRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HH-HHHTCHHHHHHHHHHHHHHHC-
T ss_pred HH-HHCCCHHHHHHHHHHHHHHhhc
Confidence 98 88999999999999888 6653
No 86
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.76 E-value=1.1e-17 Score=125.90 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=125.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy13014 16 FLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEAL 95 (229)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 95 (229)
....++.+|.++... |++++|...|++++ .. .+.+++.+|.++...|++++|+..|++++
T Consensus 5 ~~~~~~~~g~~~~~~-~~~~~A~~~~~~a~----------------~~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al 64 (213)
T 1hh8_A 5 EAISLWNEGVLAADK-KDWKGALDAFSAVQ----------------DP---HSRICFNIGCMYTILKNMTEAEKAFTRSI 64 (213)
T ss_dssp HHHHHHHHHHHHHHT-TCHHHHHHHHHTSS----------------SC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-CCHHHHHHHHHHHc----------------CC---ChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 455688899999999 99999999998775 11 46799999999999999999999999999
Q ss_pred HhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcH----------------HHHHHHHHHHHh
Q psy13014 96 RSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYL----------------KVYQRRARLYQQ 159 (229)
Q Consensus 96 ~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~la~~~~~ 159 (229)
..+|.+ +.++.++|.+ +..+|++++|+.+|++++++.|.+. .+++++|.++..
T Consensus 65 ~~~~~~-----~~~~~~lg~~------~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 133 (213)
T 1hh8_A 65 NRDKHL-----AVAYFQRGML------YYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAK 133 (213)
T ss_dssp HHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHH
T ss_pred HhCccc-----hHHHHHHHHH------HHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHH
Confidence 999999 9999999999 9999999999999999999888766 999999999999
Q ss_pred cccHHHHHHHHHHHHHhCCCcHHHH
Q psy13014 160 SDKLDEALADYQKILELDPNNRDAY 184 (229)
Q Consensus 160 ~~~~~~A~~~~~~al~~~p~~~~~~ 184 (229)
.|++++|+..|+++++++|++....
T Consensus 134 ~g~~~~A~~~~~~al~~~p~~~~~~ 158 (213)
T 1hh8_A 134 KEEWKKAEEQLALATSMKSEPRHSK 158 (213)
T ss_dssp TTCHHHHHHHHHHHHTTCCSGGGGH
T ss_pred ccCHHHHHHHHHHHHHcCcccccch
Confidence 9999999999999999999875443
No 87
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.76 E-value=1.1e-17 Score=115.74 Aligned_cols=103 Identities=18% Similarity=0.212 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH
Q psy13014 69 ISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 69 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 148 (229)
..++.+|..+...|++++|+..|++++..+|++ +.+|+.+|.+ +...|++++|+..|+++++++|+++.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~-----~~a~~~lg~~------~~~~g~~~~A~~~~~~al~l~P~~~~ 86 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPER-----EEAWRSLGLT------QAENEKDGLAIIALNHARMLDPKDIA 86 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 347889999999999999999999999999999 9999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHH
Q psy13014 149 VYQRRARLYQQSDKLDEALADYQKILELDPNNRD 182 (229)
Q Consensus 149 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 182 (229)
+++.+|.++...|++++|+..|+++++++|++..
T Consensus 87 ~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 87 VHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999999999998754
No 88
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.76 E-value=1.4e-17 Score=134.94 Aligned_cols=159 Identities=12% Similarity=0.082 Sum_probs=133.6
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+|++..+++.+|.+++.. |++++|...|++++...+.... ..........+..+.++.++|.++..+|++
T Consensus 135 ~~~~a~~~~p~~a~~~~~~g~~~~~~-g~~~~A~~~y~~Al~~~p~~~~-~~~~~~~~~~~~~~~~~~nla~~~~~~g~~ 212 (336)
T 1p5q_A 135 SWEMNSEEKLEQSTIVKERGTVYFKE-GKYKQALLQYKKIVSWLEYESS-FSNEEAQKAQALRLASHLNLAMCHLKLQAF 212 (336)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHTTTCCC-CCSHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHhhcccc-CChHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 46677788999999999999999999 9999999999998843221100 000000112344478999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHH
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLD 164 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 164 (229)
++|+.+|++++.++|.+ +.+++++|.+ +..+|++++|+.+|+++++++|++..++..+|.++..+|+++
T Consensus 213 ~~A~~~~~~al~~~p~~-----~~a~~~lg~~------~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 281 (336)
T 1p5q_A 213 SAAIESCNKALELDSNN-----EKGLSRRGEA------HLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQL 281 (336)
T ss_dssp HHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCc-----HHHHHHHHHH------HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999 999999999999999999999999999999999999999999
Q ss_pred HH-HHHHHHHHHh
Q psy13014 165 EA-LADYQKILEL 176 (229)
Q Consensus 165 ~A-~~~~~~al~~ 176 (229)
+| ...|++.+..
T Consensus 282 ~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 282 AREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 99 5567766644
No 89
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.76 E-value=2.1e-17 Score=119.21 Aligned_cols=135 Identities=27% Similarity=0.405 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
.....+..+..+|..++..|++++|+..|++++..+|.+ ..++.++|.+ +...|++++|+.++++++..
T Consensus 8 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~a~~~ 76 (166)
T 1a17_A 8 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN-----AIYYGNRSLA------YLRTECYGYALGDATRAIEL 76 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-----hHHHHHHHHH------HHHcCCHHHHHHHHHHHHHh
Confidence 345677899999999999999999999999999999999 9999999999 99999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccC--chHHHhhhhhccccccccc
Q psy13014 143 NPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVS--PDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 143 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~--~~~~~~~~~~a~~~~~~~~ 209 (229)
+|+++.+++.+|.++...|++++|+.+|+++++++|.+..++..++.+ + ...+++.+|+..+.+..
T Consensus 77 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~ 144 (166)
T 1a17_A 77 DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKI-VKQKAFERAIAGDEHKR 144 (166)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHcccchH
Confidence 999999999999999999999999999999999999999988666655 4 56788888888887664
No 90
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.76 E-value=2.1e-17 Score=132.63 Aligned_cols=181 Identities=19% Similarity=0.160 Sum_probs=157.8
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhh----------hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSE----------IRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEG 75 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~----------~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 75 (229)
+.++|.+||++..++..++.++..+ +. +.++...++..+ ...|.+..+|...+
T Consensus 53 t~~~L~~nP~~ytaWn~Rr~iL~~l-~~~~~~~~~~~~l~~EL~~~~~~L----------------~~~PKny~aW~hR~ 115 (331)
T 3dss_A 53 TSQILGANPDFATLWNCRREVLQHL-ETEKSPEESAALVKAELGFLESCL----------------RVNPKSYGTWHHRC 115 (331)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHH-HHHSCHHHHHHHHHHHHHHHHHHH----------------HHCTTCHHHHHHHH
T ss_pred HHHHHHHCchhHHHHHHHHHHHHHh-cccccchhhhHHHHHHHHHHHHHH----------------HhCCCCHHHHHHHH
Confidence 5678999999999999999999887 65 445555555544 57899999999999
Q ss_pred HHHHHccC--HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCC-hHHHHHHHHHHHhcCCCcHHHHHH
Q psy13014 76 NALFRLNQ--WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEK-PDQSILACSKAITLNPSYLKVYQR 152 (229)
Q Consensus 76 ~~~~~~~~--~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~ 152 (229)
.+....+. +++++.++.+++..+|.+ ..+|.+++.+ ....|. +++++++++++++.+|.|..+|..
T Consensus 116 wlL~~l~~~~~~~EL~~~~k~l~~dprN-----y~AW~~R~~v------l~~l~~~~~eel~~~~~~I~~~p~N~SAW~~ 184 (331)
T 3dss_A 116 WLLSRLPEPNWARELELCARFLEADERN-----FHCWDYRRFV------AAQAAVAPAEELAFTDSLITRNFSNYSSWHY 184 (331)
T ss_dssp HHHHHCSSCCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCCHHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred HHHhccCcccHHHHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHhCcCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 99999994 999999999999999999 9999999999 888888 599999999999999999999999
Q ss_pred HHHHHHhc--------------ccHHHHHHHHHHHHHhCCCcHHHHHHhccCch----------HHHhhhhhcccccccc
Q psy13014 153 RARLYQQS--------------DKLDEALADYQKILELDPNNRDAYVATKVSPD----------LKLKEKNGATKLSPDV 208 (229)
Q Consensus 153 la~~~~~~--------------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~----------~~~~~~~~a~~~~~~~ 208 (229)
++.++..+ +.++++++++.+++.++|+|..+|..+..++. .+.+.+.++++.+.++
T Consensus 185 R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~el 264 (331)
T 3dss_A 185 RSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKEL 264 (331)
T ss_dssp HHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHH
Confidence 99999988 67999999999999999999999975554442 1235588899999999
Q ss_pred c-ccCCC
Q psy13014 209 F-LHPGQ 214 (229)
Q Consensus 209 ~-~~p~~ 214 (229)
+ +.|++
T Consensus 265 le~~pd~ 271 (331)
T 3dss_A 265 QELEPEN 271 (331)
T ss_dssp HHHCTTC
T ss_pred HhhCccc
Confidence 9 88876
No 91
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.76 E-value=1.6e-18 Score=146.05 Aligned_cols=149 Identities=19% Similarity=0.329 Sum_probs=127.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCC---------
Q psy13014 32 SEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSC--------- 102 (229)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~--------- 102 (229)
+++++|...++..+ ...+..+..+..+|..++..|+|++|+..|++++.++|.+.
T Consensus 248 ~~~~~A~~~~~~~~----------------~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~ 311 (457)
T 1kt0_A 248 KSFEKAKESWEMDT----------------KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKA 311 (457)
T ss_dssp EEEECCCCGGGSCH----------------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHH
T ss_pred hhcccCcchhhcCH----------------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHH
Confidence 45666666665554 56788999999999999999999999999999999999872
Q ss_pred -chhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcH
Q psy13014 103 -SVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNR 181 (229)
Q Consensus 103 -~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 181 (229)
......+|.++|.| +..+|++++|+.+|+++++++|+++.+++++|.++..+|++++|+.+|+++++++|++.
T Consensus 312 ~~~~~~~~~~nla~~------~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 312 SESFLLAAFLNLAMC------YLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 11235899999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCchHHHhhhhhccc
Q psy13014 182 DAYVATKVSPDLKLKEKNGATK 203 (229)
Q Consensus 182 ~~~~~l~~~~~~~~~~~~~a~~ 203 (229)
.++..++.++ .++++..++.+
T Consensus 386 ~a~~~l~~~~-~~~~~~~~a~~ 406 (457)
T 1kt0_A 386 AARLQISMCQ-KKAKEHNERDR 406 (457)
T ss_dssp CHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHH
Confidence 9999999998 67776655543
No 92
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.76 E-value=1.6e-17 Score=132.38 Aligned_cols=172 Identities=11% Similarity=0.015 Sum_probs=156.5
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhh--hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH----H
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFS--EIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNAL----F 79 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~ 79 (229)
+.++|.+||++..++..++.++..+ + .++++...+++.+ ...|++..+|...+.++ .
T Consensus 56 t~~~L~~nP~~~taWn~R~~~L~~l-~~~~~~eeL~~~~~~L----------------~~nPk~y~aW~~R~~iL~~~~~ 118 (306)
T 3dra_A 56 TELGINELASHYTIWIYRFNILKNL-PNRNLYDELDWCEEIA----------------LDNEKNYQIWNYRQLIIGQIME 118 (306)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTC-TTSCHHHHHHHHHHHH----------------HHCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcHHHHHHHHHHHHHHHc-ccccHHHHHHHHHHHH----------------HHCcccHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999 8 8999999998887 67889999999999999 6
Q ss_pred Hc---cCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChH--HHHHHHHHHHhcCCCcHHHHHHHH
Q psy13014 80 RL---NQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPD--QSILACSKAITLNPSYLKVYQRRA 154 (229)
Q Consensus 80 ~~---~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~--~A~~~~~~al~~~p~~~~~~~~la 154 (229)
.. +++++++.++++++..+|.+ ..+|.+++.+ ...+|.++ +++++++++++.+|.|..+|..++
T Consensus 119 ~l~~~~~~~~EL~~~~~~l~~~pkn-----y~aW~~R~~v------l~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~ 187 (306)
T 3dra_A 119 LNNNDFDPYREFDILEAMLSSDPKN-----HHVWSYRKWL------VDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRF 187 (306)
T ss_dssp HTTTCCCTHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hccccCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 66 78999999999999999999 9999999999 88899988 999999999999999999999999
Q ss_pred HHHHhccc------HHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhcccccc
Q psy13014 155 RLYQQSDK------LDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSP 206 (229)
Q Consensus 155 ~~~~~~~~------~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~ 206 (229)
.++...++ ++++++++.+++.++|++..+|..++.++ .+.+....++..+-
T Consensus 188 ~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll-~~~~~~~~~~~~~~ 244 (306)
T 3dra_A 188 FLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIH-ERFDRSITQLEEFS 244 (306)
T ss_dssp HHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH-HHTTCCGGGGHHHH
T ss_pred HHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHH-HhcCCChHHHHHHH
Confidence 99999998 99999999999999999999999999888 66666555444333
No 93
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.76 E-value=1.1e-17 Score=116.20 Aligned_cols=118 Identities=27% Similarity=0.504 Sum_probs=113.5
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
..+..+.+++.+|.++...|++++|+..|++++..+|.+ ..++..+|.+ +...|++++|+.+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~la~~------~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 11 MNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD-----AKLYSNRAAC------YTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp SSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC-----HHHHHHHHHH------HTTTTCHHHHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc-----HHHHHHHHHH------HHHhccHHHHHHHHHHHHHh
Confidence 446788899999999999999999999999999999998 9999999999 99999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 143 NPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 143 ~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
+|+++.+++.+|.++...|++++|+..|+++++.+|.+..++..++.++
T Consensus 80 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~ 128 (133)
T 2lni_A 80 EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCM 128 (133)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998887
No 94
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.76 E-value=7.7e-18 Score=118.02 Aligned_cols=117 Identities=28% Similarity=0.469 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC
Q psy13014 64 LEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN 143 (229)
Q Consensus 64 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 143 (229)
.+..+..++.+|.+++..|++++|+..|++++..+|.+ +.++.++|.+ +..+|++++|+.++++++.++
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~al~~~ 73 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV-----AVYYTNRALC------YLKMQQPEQALADCRRALELD 73 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHC
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCc-----HHHHHHHHHH------HHHhcCHHHHHHHHHHHHHhC
Confidence 34567889999999999999999999999999999999 9999999999 999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC-----cHHHHHHhccCc
Q psy13014 144 PSYLKVYQRRARLYQQSDKLDEALADYQKILELDPN-----NRDAYVATKVSP 191 (229)
Q Consensus 144 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~l~~~~ 191 (229)
|+++.+++.+|.++...|++++|+..|+++++++|+ +..+...+..+.
T Consensus 74 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~ 126 (137)
T 3q49_B 74 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAK 126 (137)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 677777777665
No 95
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.75 E-value=3.7e-18 Score=143.24 Aligned_cols=207 Identities=13% Similarity=0.034 Sum_probs=156.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHh--hhhhhhhHHHHHHHHHHHHH-------HHH--------------HHH-hhhh
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFIL--FSEIRTDCHQFERQVFYIQF-------IFH--------------VLF-YLFC 60 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~~~~~~-------~~~--------------~~~-~~~~ 60 (229)
.|+++++++|+++.++..+|.++... .++.++|+..+++++...+. ... ... +...
T Consensus 160 ~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~a 239 (472)
T 4g1t_A 160 CFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEA 239 (472)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 58899999999999999999886655 14456777878776632110 000 000 1122
Q ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhh-------------ccC
Q psy13014 61 SQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYL-------------SLE 127 (229)
Q Consensus 61 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~-------------~~~ 127 (229)
....|..+.++..+|.++...|++++|+..|++++..+|++ +.++.++|.++..++... ..+
T Consensus 240 l~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~ 314 (472)
T 4g1t_A 240 LEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNN-----AYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLE 314 (472)
T ss_dssp HHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHHHHHHHHHHHHC------CHHHHHH
T ss_pred HHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCh-----HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 34456778889999999999999999999999999999998 999999999933333211 123
Q ss_pred ChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHH---HHHHhccCchHHHhhhhhcccc
Q psy13014 128 KPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRD---AYVATKVSPDLKLKEKNGATKL 204 (229)
Q Consensus 128 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~l~~~~~~~~~~~~~a~~~ 204 (229)
.+++|+..++++++++|.+..++..+|.++...|++++|+.+|+++++++|++.. .+..++.+.....++..+|+..
T Consensus 315 ~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~ 394 (472)
T 4g1t_A 315 LIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHH 394 (472)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred hHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 4678899999999999999999999999999999999999999999999887664 3455665543567788999999
Q ss_pred ccccc-ccCCCcc
Q psy13014 205 SPDVF-LHPGQPQ 216 (229)
Q Consensus 205 ~~~~~-~~p~~~~ 216 (229)
|.+++ ++|++..
T Consensus 395 y~kal~i~~~~~~ 407 (472)
T 4g1t_A 395 FIEGVKINQKSRE 407 (472)
T ss_dssp HHHHHHSCCCCHH
T ss_pred HHHHHhcCcccHH
Confidence 99999 8887654
No 96
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.75 E-value=7.3e-18 Score=133.90 Aligned_cols=193 Identities=11% Similarity=0.024 Sum_probs=149.1
Q ss_pred hhcccCCch-HHHHHHHHHHHHHhhhhhhhhHHHHHHH----HHHHHHHHHH----------HHhhhh-hhh--HHHHHH
Q psy13014 8 QELSKNPSF-LYTIYFSCFILFILFSEIRTDCHQFERQ----VFYIQFIFHV----------LFYLFC-SQK--LEQTAI 69 (229)
Q Consensus 8 ~~l~~~p~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~~~~~~----------~~~~~~-~~~--~~~~~~ 69 (229)
+....+|++ ....+.++.++... |+++.+...++.. +..+..+... +..+.. ... .|+++.
T Consensus 24 ~~~~~~p~~~~e~~~~l~r~yi~~-g~~~~al~~~~~~~~~~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~ 102 (291)
T 3mkr_A 24 RVKPSSPERDVERDVFLYRAYLAQ-RKYGVVLDEIKPSSAPELQAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTT 102 (291)
T ss_dssp HSCCCSHHHHHHHHHHHHHHHHHT-TCHHHHHHHSCTTSCHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHH
T ss_pred hcccCCchhhHHHHHHHHHHHHHC-CCHHHHHHHhcccCChhHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHH
Confidence 344566766 35777778888888 8888777655221 0111111111 101111 111 367788
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHH
Q psy13014 70 SLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKV 149 (229)
Q Consensus 70 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 149 (229)
+++.+|.++...|++++|+..+++ |.+ ..++..+|.+ +..+|++++|+..++++++.+|++...
T Consensus 103 ~~~~la~~~~~~g~~~~Al~~l~~-----~~~-----~~~~~~l~~~------~~~~g~~~~A~~~l~~~~~~~p~~~~~ 166 (291)
T 3mkr_A 103 FLLMAASIYFYDQNPDAALRTLHQ-----GDS-----LECMAMTVQI------LLKLDRLDLARKELKKMQDQDEDATLT 166 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTT-----CCS-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHhC-----CCC-----HHHHHHHHHH------HHHCCCHHHHHHHHHHHHhhCcCcHHH
Confidence 999999999999999999999988 777 9999999999 999999999999999999999998754
Q ss_pred HHHHH--HHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcccc
Q psy13014 150 YQRRA--RLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 150 ~~~la--~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
....+ .++...|++++|+..|+++++.+|+++.++.++|.++ .+++++.+|...+.+++ ++|++....
T Consensus 167 ~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~-~~~g~~~eA~~~l~~al~~~p~~~~~l 237 (291)
T 3mkr_A 167 QLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACH-MAQGRWEAAEGVLQEALDKDSGHPETL 237 (291)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 44333 3344569999999999999999999999999999999 89999999999999999 999887654
No 97
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.75 E-value=2.3e-18 Score=139.61 Aligned_cols=143 Identities=17% Similarity=0.228 Sum_probs=97.6
Q ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhH-----------------HHHHhHhhhhhhhHHhh
Q psy13014 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRA-----------------VFYANRSAALEKLASYL 124 (229)
Q Consensus 62 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-----------------~~~~~lg~~~~~~~~~~ 124 (229)
...+..+..+..+|..++..|+|++|+..|++++...|.+ . .++.++|.| +.
T Consensus 173 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~-----~~~~~~~~~~~~~~~l~~~~~~nla~~------~~ 241 (338)
T 2if4_A 173 EERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDD-----FMFQLYGKYQDMALAVKNPCHLNIAAC------LI 241 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHH-----HHHTCCHHHHHHHHHHHTHHHHHHHHH------HH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccc-----hhhhhcccHHHHHHHHHHHHHHHHHHH------HH
Confidence 3456788889999999999999999999999999999976 4 489999999 99
Q ss_pred ccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhcccc
Q psy13014 125 SLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKL 204 (229)
Q Consensus 125 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~ 204 (229)
.+|++++|+.+|+++++++|++..+++++|.++..+|++++|+.+|+++++++|++..++..++.+.....+...++.+.
T Consensus 242 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~ 321 (338)
T 2if4_A 242 KLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEM 321 (338)
T ss_dssp TTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------------------
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999964555567888889
Q ss_pred ccccc-ccCCCc
Q psy13014 205 SPDVF-LHPGQP 215 (229)
Q Consensus 205 ~~~~~-~~p~~~ 215 (229)
|.+++ ..|++.
T Consensus 322 ~~~~l~~~p~~~ 333 (338)
T 2if4_A 322 YKGIFKGKDEGG 333 (338)
T ss_dssp ------------
T ss_pred HHHhhCCCCCCC
Confidence 99999 888654
No 98
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.75 E-value=2.2e-17 Score=114.28 Aligned_cols=133 Identities=28% Similarity=0.400 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH
Q psy13014 69 ISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 69 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 148 (229)
.+++.+|.++...|++++|+..+++++...|.+ ..++..+|.+ +...|++++|+..+++++...|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~~~~~~~~ 70 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS-----AEAWYNLGNA------YYKQGDYDEAIEYYQKALELDPRSAE 70 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcc-----hhHHHHHHHH------HHHhcCHHHHHHHHHHHHHHCCCchH
Confidence 467889999999999999999999999999998 9999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCC
Q psy13014 149 VYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPG 213 (229)
Q Consensus 149 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~ 213 (229)
+++.+|.++...|++++|+..+++++...|.+..++..++.++ ...++..+|...+.+++ .+|+
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~-~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAY-YKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHH-HHHccHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999999999999999999998 88899999999999888 7764
No 99
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=132.35 Aligned_cols=184 Identities=18% Similarity=0.124 Sum_probs=157.2
Q ss_pred ccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHH
Q psy13014 11 SKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAK 90 (229)
Q Consensus 11 ~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 90 (229)
..+|+...+++.+|.++... |++++|...+++++....... ....+..+.++..+|.++...|++++|+.+
T Consensus 21 ~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~a~~~~~~~~--------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 91 (311)
T 3nf1_A 21 YEIPARLRTLHNLVIQYASQ-GRYEVAVPLCKQALEDLEKTS--------GHDHPDVATMLNILALVYRDQNKYKDAANL 91 (311)
T ss_dssp TTSCHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHH--------CSSSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 45788889999999999999 999999999998874322100 013578889999999999999999999999
Q ss_pred HHHHHHhC-----CCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC--------CCcHHHHHHHHHHH
Q psy13014 91 YNEALRSC-----PRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN--------PSYLKVYQRRARLY 157 (229)
Q Consensus 91 ~~~al~~~-----p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~ 157 (229)
+++++... ++. .....++..+|.+ +...|++++|+.++++++++. |....++..+|.++
T Consensus 92 ~~~al~~~~~~~~~~~--~~~~~~~~~l~~~------~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 163 (311)
T 3nf1_A 92 LNDALAIREKTLGKDH--PAVAATLNNLAVL------YGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLC 163 (311)
T ss_dssp HHHHHHHHHHHHCTTC--HHHHHHHHHHHHH------HHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCC--hHHHHHHHHHHHH------HHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 99999883 111 1237889999999 999999999999999999874 55677899999999
Q ss_pred HhcccHHHHHHHHHHHHHh--------CCCcHHHHHHhccCchHHHhhhhhccccccccc-ccC
Q psy13014 158 QQSDKLDEALADYQKILEL--------DPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHP 212 (229)
Q Consensus 158 ~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p 212 (229)
...|++++|+..+++++.+ +|....++..++.++ ...+++.+|+..+.+++ ..|
T Consensus 164 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 164 QNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCY-LKQGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 777888999999999 88999999999999888 543
No 100
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.74 E-value=8.4e-17 Score=109.02 Aligned_cols=114 Identities=26% Similarity=0.394 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 146 (229)
.+..++.+|..+...|++++|+..|++++..+|.+ +.++..+|.+ +...|++++|+..+++++..+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~~~~~~ 71 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHN-----HVLYSNRSAA------YAKKGDYQKAYEDGCKTVDLKPDW 71 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc-----HHHHHHHHHH------HHhhccHHHHHHHHHHHHHhCccc
Confidence 45678999999999999999999999999999998 9999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
+.+++.+|.++...|++++|+..++++++.+|+++.++..++.+.
T Consensus 72 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 72 GKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999999999999999999999999998887654
No 101
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.73 E-value=8e-17 Score=126.01 Aligned_cols=177 Identities=14% Similarity=0.016 Sum_probs=93.9
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH-----HH--------------HHHHhhhhhhhHHHHHHHHHH
Q psy13014 13 NPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQF-----IF--------------HVLFYLFCSQKLEQTAISLKD 73 (229)
Q Consensus 13 ~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-----~~--------------~~~~~~~~~~~~~~~~~~~~~ 73 (229)
+|+++.+++.+|.++... |++++|..+|++++..... .. ..+.++... ....++.+++.
T Consensus 2 ~~~~~~a~~~lg~~~~~~-~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a-~~~~~~~a~~~ 79 (273)
T 1ouv_A 2 AEQDPKELVGLGAKSYKE-KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKA-CDLNYSNGCHL 79 (273)
T ss_dssp ---CHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH-HHTTCHHHHHH
T ss_pred CCCChHHHHHHHHHHHhC-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHH-HHCCCHHHHHH
Confidence 577888888888888888 8888888888776621000 00 000000000 00113445555
Q ss_pred HHHHHHH----ccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhc----cCChHHHHHHHHHHHhcCCC
Q psy13014 74 EGNALFR----LNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLS----LEKPDQSILACSKAITLNPS 145 (229)
Q Consensus 74 ~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~ 145 (229)
+|.++.. .+++++|+..|++++... + +.++.++|.+ +.. .+++++|+.+|+++++.+
T Consensus 80 lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~-----~~a~~~lg~~------~~~~~~~~~~~~~A~~~~~~a~~~~-- 144 (273)
T 1ouv_A 80 LGNLYYSGQGVSQNTNKALQYYSKACDLK--Y-----AEGCASLGGI------YHDGKVVTRDFKKAVEYFTKACDLN-- 144 (273)
T ss_dssp HHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C-----HHHHHHHHHH------HHHCSSSCCCHHHHHHHHHHHHHTT--
T ss_pred HHHHHhCCCCcccCHHHHHHHHHHHHHcC--C-----ccHHHHHHHH------HHcCCCcccCHHHHHHHHHHHHhcC--
Confidence 5555555 555555555555555542 3 5555555555 555 555555555555555543
Q ss_pred cHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHH----Hhhhhhccccccccc
Q psy13014 146 YLKVYQRRARLYQQ----SDKLDEALADYQKILELDPNNRDAYVATKVSPDLK----LKEKNGATKLSPDVF 209 (229)
Q Consensus 146 ~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~----~~~~~~a~~~~~~~~ 209 (229)
++.+++++|.++.. .+++++|+.+|+++++.+ ++.++..++.++ .. .++..+|+..+.+++
T Consensus 145 ~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~-~~g~~~~~~~~~A~~~~~~a~ 213 (273)
T 1ouv_A 145 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK--DSPGCFNAGNMY-HHGEGATKNFKEALARYSKAC 213 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH-HHTCSSCCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH-HcCCCCCccHHHHHHHHHHHH
Confidence 34555555555555 555555555555555542 345555555555 44 555555555555554
No 102
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.73 E-value=5.3e-17 Score=123.96 Aligned_cols=158 Identities=9% Similarity=0.010 Sum_probs=130.1
Q ss_pred cchhhcccCCchH---HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH-
Q psy13014 5 PYQQELSKNPSFL---YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFR- 80 (229)
Q Consensus 5 ~~~~~l~~~p~~~---~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~- 80 (229)
.|+++++.+|+++ .+++.+|.++... |++++|+..|++++... ...+..+.+++.+|.++..
T Consensus 26 ~~~~~~~~~p~~~~~~~a~~~lg~~~~~~-~~~~~A~~~~~~~l~~~-------------P~~~~~~~a~~~~g~~~~~~ 91 (225)
T 2yhc_A 26 QLEALDNRYPFGPYSQQVQLDLIYAYYKN-ADLPLAQAAIDRFIRLN-------------PTHPNIDYVMYMRGLTNMAL 91 (225)
T ss_dssp HHHHHHHHCTTSTTHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHC-------------TTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHC-------------cCCCcHHHHHHHHHHHHHhh
Confidence 4778888888774 6899999999999 99999999999988321 1222334578888888876
Q ss_pred -----------------ccCHHHHHHHHHHHHHhCCCCCchhh------------HHHHHhHhhhhhhhHHhhccCChHH
Q psy13014 81 -----------------LNQWSESLAKYNEALRSCPRSCSVSR------------AVFYANRSAALEKLASYLSLEKPDQ 131 (229)
Q Consensus 81 -----------------~~~~~~A~~~~~~al~~~p~~~~~~~------------~~~~~~lg~~~~~~~~~~~~~~~~~ 131 (229)
.|++++|+..|++++..+|++..... ......+|.+ ++..|++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~------~~~~~~~~~ 165 (225)
T 2yhc_A 92 DDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEY------YTERGAWVA 165 (225)
T ss_dssp HC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHTCHHH
T ss_pred hhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHH------HHHcCcHHH
Confidence 67999999999999999999832110 1122567888 999999999
Q ss_pred HHHHHHHHHhcCCCcH---HHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHH
Q psy13014 132 SILACSKAITLNPSYL---KVYQRRARLYQQSDKLDEALADYQKILELDPNNRD 182 (229)
Q Consensus 132 A~~~~~~al~~~p~~~---~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 182 (229)
|+..|+++++..|+++ .+++.+|.++..+|++++|+..++.+....|++.+
T Consensus 166 A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~~ 219 (225)
T 2yhc_A 166 VVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTLE 219 (225)
T ss_dssp HHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCCC
T ss_pred HHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCchh
Confidence 9999999999999986 68999999999999999999999999999988653
No 103
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.72 E-value=1.4e-16 Score=124.64 Aligned_cols=187 Identities=11% Similarity=0.072 Sum_probs=150.9
Q ss_pred chhhcccCCchHHHHHHHHHHHHH----hhhhhhhhHHHHHHHHHHHH-----HHHH--------------HHHhhhhhh
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFI----LFSEIRTDCHQFERQVFYIQ-----FIFH--------------VLFYLFCSQ 62 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~----~~~~~~~a~~~~~~~~~~~~-----~~~~--------------~~~~~~~~~ 62 (229)
|+++++ |+++.+++.+|.++.. . +++++|..+|++++..-. .... .+.++...
T Consensus 29 ~~~a~~--~~~~~a~~~lg~~~~~g~~~~-~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a- 104 (273)
T 1ouv_A 29 FEKACD--LKENSGCFNLGVLYYQGQGVE-KNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKA- 104 (273)
T ss_dssp HHHHHH--TTCHHHHHHHHHHHHHTSSSC-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH-
T ss_pred HHHHHH--CCCHHHHHHHHHHHHcCCCcC-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHH-
Confidence 455555 6777888888888887 7 888888888877653210 0000 00011100
Q ss_pred hHHHHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhc----cCChHHHHH
Q psy13014 63 KLEQTAISLKDEGNALFR----LNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLS----LEKPDQSIL 134 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~----~~~~~~A~~ 134 (229)
....++.+++.+|.++.. .+++++|+.+|++++... + +.++.++|.+ +.. .+++++|+.
T Consensus 105 ~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~-----~~a~~~lg~~------~~~~~~~~~~~~~A~~ 171 (273)
T 1ouv_A 105 CDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--D-----GDGCTILGSL------YDAGRGTPKDLKKALA 171 (273)
T ss_dssp HHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--C-----HHHHHHHHHH------HHHTSSSCCCHHHHHH
T ss_pred HHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--c-----HHHHHHHHHH------HHcCCCCCCCHHHHHH
Confidence 111367899999999999 999999999999999976 4 8899999999 988 999999999
Q ss_pred HHHHHHhcCCCcHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHH----Hhhhhhcccccc
Q psy13014 135 ACSKAITLNPSYLKVYQRRARLYQQ----SDKLDEALADYQKILELDPNNRDAYVATKVSPDLK----LKEKNGATKLSP 206 (229)
Q Consensus 135 ~~~~al~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~----~~~~~~a~~~~~ 206 (229)
+|+++++. +++.+++.+|.++.. .+++++|+.+|+++++.+| +.++..++.++ .. .++..+|++.+.
T Consensus 172 ~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~-~~g~~~~~~~~~A~~~~~ 246 (273)
T 1ouv_A 172 SYDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GGGCFNLGAMQ-YNGEGVTRNEKQAIENFK 246 (273)
T ss_dssp HHHHHHHT--TCHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHH-HTTSSSSCCSTTHHHHHH
T ss_pred HHHHHHHC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHH-HcCCCcccCHHHHHHHHH
Confidence 99999987 468999999999999 9999999999999999977 88999999998 77 888999999999
Q ss_pred ccc-ccCCC
Q psy13014 207 DVF-LHPGQ 214 (229)
Q Consensus 207 ~~~-~~p~~ 214 (229)
+++ +.|.+
T Consensus 247 ~a~~~~~~~ 255 (273)
T 1ouv_A 247 KGCKLGAKG 255 (273)
T ss_dssp HHHHHTCHH
T ss_pred HHHHcCCHH
Confidence 999 88754
No 104
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.72 E-value=3.2e-17 Score=123.39 Aligned_cols=133 Identities=21% Similarity=0.231 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 146 (229)
....++.+|..+...|++++|+..|++++ .| + +.++.++|.+ +...|++++|+.+|++++.++|++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~~~~ 70 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DP-H-----SRICFNIGCM------YTILKNMTEAEKAFTRSINRDKHL 70 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-C-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-C-----hHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCccc
Confidence 44567899999999999999999999995 34 5 8899999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcH----------------HHHHHhccCchHHHhhhhhccccccccc-
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILELDPNNR----------------DAYVATKVSPDLKLKEKNGATKLSPDVF- 209 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~l~~~~~~~~~~~~~a~~~~~~~~- 209 (229)
+.+++++|.++...|++++|+..|++++++.|.+. .++.++|.++ ...+++.+|...+.+++
T Consensus 71 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~ 149 (213)
T 1hh8_A 71 AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMY-AKKEEWKKAEEQLALATS 149 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHH-HHccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888877 9999999999 88999999999999999
Q ss_pred ccCCC
Q psy13014 210 LHPGQ 214 (229)
Q Consensus 210 ~~p~~ 214 (229)
++|++
T Consensus 150 ~~p~~ 154 (213)
T 1hh8_A 150 MKSEP 154 (213)
T ss_dssp TCCSG
T ss_pred cCccc
Confidence 88854
No 105
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.72 E-value=4.2e-17 Score=133.78 Aligned_cols=175 Identities=11% Similarity=0.072 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy13014 19 TIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSC 98 (229)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 98 (229)
.++.+|.++... |++++|...|++++.... .....+..+.++..+|.++...|++++|+.++++++.+.
T Consensus 105 ~~~~~g~~~~~~-g~~~~A~~~~~~al~~~~----------~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 173 (383)
T 3ulq_A 105 FNFFRGMYELDQ-REYLSAIKFFKKAESKLI----------FVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIY 173 (383)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHHHHTTGG----------GCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCHHHHHHHHHHHHHHHh----------hCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 455689999999 999999999998873211 112356788999999999999999999999999999997
Q ss_pred CCCC--chhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhcccHHHHHHHH
Q psy13014 99 PRSC--SVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY------LKVYQRRARLYQQSDKLDEALADY 170 (229)
Q Consensus 99 p~~~--~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~ 170 (229)
+... ....+.++.++|.+ +..+|++++|+.++++++.+.+.. ..++.++|.++..+|++++|+.++
T Consensus 174 ~~~~~~~~~~~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~ 247 (383)
T 3ulq_A 174 KEHEAYNIRLLQCHSLFATN------FLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYF 247 (383)
T ss_dssp HTCSTTHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhCccchHHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 6553 23357789999999 999999999999999999885432 358999999999999999999999
Q ss_pred HHHHH-----hC-CCcHHHHHHhccCchHHHhhhhhccccccccc-cc
Q psy13014 171 QKILE-----LD-PNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LH 211 (229)
Q Consensus 171 ~~al~-----~~-p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~ 211 (229)
+++++ .+ |....++.++|.++ .+.+++.+|...+.+++ +.
T Consensus 248 ~~al~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 248 KRAIAVFEESNILPSLPQAYFLITQIH-YKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHHHHTTCGGGHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccchhHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHH
Confidence 99999 56 88889999999999 88999999999999887 54
No 106
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.72 E-value=4.6e-16 Score=112.05 Aligned_cols=134 Identities=11% Similarity=0.101 Sum_probs=121.3
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy13014 15 SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEA 94 (229)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 94 (229)
+....++.+|.++... |++++|...|++++ ...|.++.++..+|.++...|++++|+..++++
T Consensus 11 ~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al----------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 73 (166)
T 1a17_A 11 KRAEELKTQANDYFKA-KDYENAIKFYSQAI----------------ELNPSNAIYYGNRSLAYLRTECYGYALGDATRA 73 (166)
T ss_dssp HHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-cCHHHHHHHHHHHH----------------HhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3467789999999999 99999999999888 456777889999999999999999999999999
Q ss_pred HHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHH--HHHhcccHHHHHHHHHH
Q psy13014 95 LRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRAR--LYQQSDKLDEALADYQK 172 (229)
Q Consensus 95 l~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~--~~~~~~~~~~A~~~~~~ 172 (229)
+..+|.+ +.++..+|.+ +..+|++++|+.+++++++++|.+..++..++. .+...|++++|+..+.+
T Consensus 74 ~~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 142 (166)
T 1a17_A 74 IELDKKY-----IKGYYRRAAS------NMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEH 142 (166)
T ss_dssp HHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCccc-----HHHHHHHHHH------HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 9999999 9999999999 999999999999999999999999988855544 48889999999999988
Q ss_pred HHHh
Q psy13014 173 ILEL 176 (229)
Q Consensus 173 al~~ 176 (229)
+..+
T Consensus 143 ~~~~ 146 (166)
T 1a17_A 143 KRSV 146 (166)
T ss_dssp HHHH
T ss_pred hHHH
Confidence 7654
No 107
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.71 E-value=1.6e-17 Score=140.67 Aligned_cols=130 Identities=28% Similarity=0.437 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCC
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNP 144 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 144 (229)
+..+..+..+|..+...|++++|+..|+++++++|.+ +.++.++|.+ +..+|++++|+.+++++++++|
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~l~p 71 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSN-----AIYYGNRSLA------YLRTECYGYALGDATRAIELDK 71 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHSCT
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc-----HHHHHHHHHH------HHHhcCHHHHHHHHHHHHHhCC
Confidence 4556678889999999999999999999999999999 9999999999 9999999999999999999999
Q ss_pred CcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccC--chHHHhhhhhcccccc
Q psy13014 145 SYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVS--PDLKLKEKNGATKLSP 206 (229)
Q Consensus 145 ~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~--~~~~~~~~~~a~~~~~ 206 (229)
+++.+++++|.++..+|++++|+..|+++++++|++..++..++.+ + .+.+++.+|++.+.
T Consensus 72 ~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 72 KYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKI-VKQKAFERAIAGDE 134 (477)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHH-HHHHHHCCC-----
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999988 5 67788999999998
No 108
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.71 E-value=4.9e-16 Score=106.17 Aligned_cols=114 Identities=30% Similarity=0.423 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 146 (229)
.+..++.+|.++...|++++|+..|++++...|.+ ..++..+|.+ +...|++++|+..+++++..+|.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~~~~la~~------~~~~~~~~~A~~~~~~~~~~~~~~ 76 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----AEAWYNLGNA------YYKQGDYDEAIEYYQKALELDPNN 76 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCc-----HHHHHHHHHH------HHHhCCHHHHHHHHHHHHHhCCcc
Confidence 46789999999999999999999999999999998 9999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
+.++..+|.++...|++++|+..++++++.+|+++.++..++.++
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 77 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988776
No 109
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.71 E-value=3.5e-17 Score=120.23 Aligned_cols=142 Identities=8% Similarity=-0.019 Sum_probs=121.8
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH-HHccC
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNAL-FRLNQ 83 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~ 83 (229)
.|+++++.+|+++.+++.+|.++... |++++|...+++++ ...| ++......+.+. ...+.
T Consensus 28 ~~~~al~~~P~~~~a~~~la~~~~~~-g~~~~A~~~~~~a~----------------~~~p-~~~~~~~~~~~~~~~~~~ 89 (176)
T 2r5s_A 28 VIQTLSDELQSRGDVKLAKADCLLET-KQFELAQELLATIP----------------LEYQ-DNSYKSLIAKLELHQQAA 89 (176)
T ss_dssp HHHTSCHHHHTSHHHHHHHHHHHHHT-TCHHHHHHHHTTCC----------------GGGC-CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCcHHHHHHHHHHHHHC-CCHHHHHHHHHHhh----------------hccC-ChHHHHHHHHHHHHhhcc
Confidence 47889999999999999999999999 99999999998876 3334 444444444332 23334
Q ss_pred HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc--HHHHHHHHHHHHhcc
Q psy13014 84 WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY--LKVYQRRARLYQQSD 161 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~la~~~~~~~ 161 (229)
..+|+..+++++..+|++ +.+++++|.+ +...|++++|+..|+++++.+|+. +.++..+|.++..+|
T Consensus 90 ~~~a~~~~~~al~~~P~~-----~~~~~~la~~------~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g 158 (176)
T 2r5s_A 90 ESPELKRLEQELAANPDN-----FELACELAVQ------YNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALG 158 (176)
T ss_dssp SCHHHHHHHHHHHHSTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhC
Confidence 456899999999999999 9999999999 999999999999999999999976 669999999999999
Q ss_pred cHHHHHHHHHHHHH
Q psy13014 162 KLDEALADYQKILE 175 (229)
Q Consensus 162 ~~~~A~~~~~~al~ 175 (229)
+.++|+..|++++.
T Consensus 159 ~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 159 QGNAIASKYRRQLY 172 (176)
T ss_dssp SSCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHH
Confidence 99999999999875
No 110
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.71 E-value=1.2e-16 Score=130.97 Aligned_cols=131 Identities=27% Similarity=0.403 Sum_probs=118.9
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH----------------hCCCCCchhhHHHHHhHhhhhhhhHHhhcc
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALR----------------SCPRSCSVSRAVFYANRSAALEKLASYLSL 126 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----------------~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~ 126 (229)
.....+..+..+|..++..|++++|+..|++++. .+|.. ..++.++|.+ +..+
T Consensus 218 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~-----~~~~~nla~~------~~~~ 286 (370)
T 1ihg_A 218 KILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVA-----LSCVLNIGAC------KLKM 286 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHH-----HHHHHHHHHH------HHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHH-----HHHHHHHHHH------HHhc
Confidence 3446677899999999999999999999999999 55555 8999999999 9999
Q ss_pred CChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccc
Q psy13014 127 EKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLS 205 (229)
Q Consensus 127 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~ 205 (229)
|++++|+.+++++++++|+++.+++++|.++..+|++++|+..|+++++++|++..++..++.++ ..+++..++.+..
T Consensus 287 g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~-~~~~~~~~a~k~~ 364 (370)
T 1ihg_A 287 SDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVK-QKIKAQKDKEKAA 364 (370)
T ss_dssp TCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998 6777766665443
No 111
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.71 E-value=8.8e-17 Score=117.83 Aligned_cols=134 Identities=16% Similarity=0.162 Sum_probs=117.3
Q ss_pred HHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhH
Q psy13014 28 FILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRA 107 (229)
Q Consensus 28 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 107 (229)
... |++++|...+++++ ...|.++.+++.+|.++...|++++|+.+|++++.++|.+ +
T Consensus 21 ~~~-~~~~~A~~~~~~al----------------~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----~ 78 (177)
T 2e2e_A 21 ASQ-QNPEAQLQALQDKI----------------RANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGEN-----A 78 (177)
T ss_dssp C------CCCCHHHHHHH----------------HHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSC-----H
T ss_pred hhc-cCHHHHHHHHHHHH----------------HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-----H
Confidence 345 88899999998887 5667788999999999999999999999999999999998 9
Q ss_pred HHHHhHhhhhhhhHHhh-ccCCh--HHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHH
Q psy13014 108 VFYANRSAALEKLASYL-SLEKP--DQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184 (229)
Q Consensus 108 ~~~~~lg~~~~~~~~~~-~~~~~--~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 184 (229)
.++..+|.+ +. ..|++ ++|+..+++++..+|+++.+++.+|.++...|++++|+..|+++++++|++....
T Consensus 79 ~~~~~la~~------l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 79 ELYAALATV------LYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHHHHHHH------HHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHH
T ss_pred HHHHHHHHH------HHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHH
Confidence 999999988 54 78998 9999999999999999999999999999999999999999999999999987665
Q ss_pred HHhcc
Q psy13014 185 VATKV 189 (229)
Q Consensus 185 ~~l~~ 189 (229)
..+..
T Consensus 153 ~~~~~ 157 (177)
T 2e2e_A 153 QLVES 157 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54443
No 112
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.70 E-value=7.5e-17 Score=132.27 Aligned_cols=156 Identities=11% Similarity=0.018 Sum_probs=131.0
Q ss_pred chhhccc------CCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q psy13014 6 YQQELSK------NPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALF 79 (229)
Q Consensus 6 ~~~~l~~------~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 79 (229)
|+++++. .+....+++.+|.++... |+++.|..++.+++...+. .....+..+.++..+|.++.
T Consensus 126 ~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~-~~~~~A~~~~~~al~~~~~---------~~~~~~~~~~~~~~lg~~~~ 195 (383)
T 3ulq_A 126 FKKAESKLIFVKDRIEKAEFFFKMSESYYYM-KQTYFSMDYARQAYEIYKE---------HEAYNIRLLQCHSLFATNFL 195 (383)
T ss_dssp HHHHHTTGGGCCCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHT---------CSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHh---------CccchHHHHHHHHHHHHHHH
Confidence 4556654 334568899999999999 9999999999988744321 00115677889999999999
Q ss_pred HccCHHHHHHHHHHHHHhCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh-----cC-CCcHHHHHH
Q psy13014 80 RLNQWSESLAKYNEALRSCPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT-----LN-PSYLKVYQR 152 (229)
Q Consensus 80 ~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~-p~~~~~~~~ 152 (229)
..|++++|+.+|++++.+.+.... ...+.++.++|.+ +..+|++++|+.++++++. .+ |..+.++.+
T Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~------y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 269 (383)
T 3ulq_A 196 DLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLC------KNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFL 269 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH------HHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 999999999999999998765432 2346789999999 9999999999999999999 56 888999999
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhC
Q psy13014 153 RARLYQQSDKLDEALADYQKILELD 177 (229)
Q Consensus 153 la~~~~~~~~~~~A~~~~~~al~~~ 177 (229)
+|.++..+|++++|+.++++++++.
T Consensus 270 l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 270 ITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999884
No 113
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.70 E-value=5.4e-17 Score=128.21 Aligned_cols=140 Identities=27% Similarity=0.427 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 146 (229)
.+..+..+|..++..|++++|+..|++++..+|.+ +.++.++|.+ +..+|++++|+..++++++++|++
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~------~~~~~~~~~A~~~~~~al~~~p~~ 71 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV-----AVYYTNRALC------YLKMQQPEQALADCRRALELDGQS 71 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHTTSCTTC
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc-----HHHHHHHHHH------HHHhcCHHHHHHHHHHHHHhCCCC
Confidence 35678899999999999999999999999999999 9999999999 999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcH-----HHHHHhccCch-----------------------HHHhhh
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILELDPNNR-----DAYVATKVSPD-----------------------LKLKEK 198 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~~-----------------------~~~~~~ 198 (229)
+.+++++|.++..+|++++|+..|+++++++|+++ .++..+..... ...++.
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~ 151 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAER 151 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998763 12221111100 134567
Q ss_pred hhccccccccc-ccCCCccc
Q psy13014 199 NGATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 199 ~~a~~~~~~~~-~~p~~~~~ 217 (229)
.+|++.+.+++ ++|++..+
T Consensus 152 ~~A~~~~~~al~~~p~~~~~ 171 (281)
T 2c2l_A 152 ERELEECQRNHEGHEDDGHI 171 (281)
T ss_dssp HHHHTTTSGGGTTTSCHHHH
T ss_pred HHHHHHHHhhhccccchhhh
Confidence 88999999998 88865443
No 114
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.70 E-value=2.6e-16 Score=108.96 Aligned_cols=115 Identities=10% Similarity=0.024 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc--
Q psy13014 69 ISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY-- 146 (229)
Q Consensus 69 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-- 146 (229)
..++.+|..++..|++++|+..|++++..+|++.. .+.+++.+|.+ +...|++++|+..|++++..+|++
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~--~~~~~~~lg~~------~~~~~~~~~A~~~~~~~~~~~p~~~~ 74 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVY--TPNALYWLGES------YYATRNFQLAEAQFRDLVSRYPTHDK 74 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTT--HHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTSTT
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcc--cHHHHHHHHHH------HHHhccHHHHHHHHHHHHHHCCCCcc
Confidence 35678999999999999999999999999998710 12799999999 999999999999999999999999
Q ss_pred -HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 147 -LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 147 -~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
+.+++.+|.++..+|++++|+..|++++..+|+++.+......+.
T Consensus 75 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~ 120 (129)
T 2xev_A 75 AAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQ 120 (129)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHH
Confidence 899999999999999999999999999999999998877665543
No 115
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.70 E-value=4.1e-16 Score=107.90 Aligned_cols=118 Identities=16% Similarity=0.166 Sum_probs=110.4
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy13014 14 PSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNE 93 (229)
Q Consensus 14 p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 93 (229)
|.....++.+|..++.. |++++|...|++++ ...|.++.++..+|.++...|++++|+..|++
T Consensus 1 p~~a~~~~~~g~~~~~~-~~~~~A~~~~~~al----------------~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 63 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTK-SDWPNAVKAYTEMI----------------KRAPEDARGYSNRAAALAKLMSFPEAIADCNK 63 (126)
T ss_dssp CHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHh-cCHHHHHHHHHHHH----------------HhCCCChHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 56778899999999999 99999999999988 56788899999999999999999999999999
Q ss_pred HHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC------CCcHHHHHHHHHHHHh
Q psy13014 94 ALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN------PSYLKVYQRRARLYQQ 159 (229)
Q Consensus 94 al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~ 159 (229)
++.++|.+ +.+++++|.+ +..+|++++|+.+|+++++++ |++..++..++.+...
T Consensus 64 al~~~p~~-----~~~~~~lg~~------~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 64 AIEKDPNF-----VRAYIRKATA------QIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHhCCCc-----HHHHHHHHHH------HHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 99999999 9999999999 999999999999999999999 9999998888877654
No 116
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.70 E-value=2.7e-16 Score=108.45 Aligned_cols=119 Identities=24% Similarity=0.366 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS 145 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 145 (229)
..+..++.+|..+...|++++|+..|++++..+|.+ +.++..+|.+ +...|++++|+.++++++...|.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~la~~------~~~~~~~~~A~~~~~~~~~~~~~ 70 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTN-----MTYITNQAAV------YFEKGDYNKCRELCEKAIEVGRE 70 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc-----HHHHHHHHHH------HHHhccHHHHHHHHHHHHhhccc
Confidence 456788999999999999999999999999999998 9999999999 99999999999999999999887
Q ss_pred c-------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhh
Q psy13014 146 Y-------LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKE 197 (229)
Q Consensus 146 ~-------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 197 (229)
+ +.+++.+|.++...|++++|+..|+++++.+| ++.....++.+. ..+++
T Consensus 71 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~-~~~~~ 127 (131)
T 1elr_A 71 NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAE-KILKE 127 (131)
T ss_dssp STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHH-HHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHH-HHHHH
Confidence 7 89999999999999999999999999999999 588888888776 44433
No 117
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.69 E-value=3e-16 Score=108.11 Aligned_cols=126 Identities=12% Similarity=0.105 Sum_probs=116.7
Q ss_pred cccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHH
Q psy13014 10 LSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLA 89 (229)
Q Consensus 10 l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~ 89 (229)
.+.+|++...++.+|.++... |++++|...+++++ ...|.++.++..+|.++...|++++|+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 67 (131)
T 2vyi_A 5 SEEDSAEAERLKTEGNEQMKV-ENFEAAVHFYGKAI----------------ELNPANAVYFCNRAAAYSKLGNYAGAVQ 67 (131)
T ss_dssp --CHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hhcchhhhHHHHHHHHHHHHc-cCHHHHHHHHHHHH----------------HcCCCCHHHHHHHHHHHHHhhchHHHHH
Confidence 456788899999999999999 99999999999887 4556678899999999999999999999
Q ss_pred HHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccH
Q psy13014 90 KYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKL 163 (229)
Q Consensus 90 ~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~ 163 (229)
.+++++..+|.+ +.++..+|.+ +...|++++|+.+++++++.+|++..++..+|.++..+|++
T Consensus 68 ~~~~~~~~~~~~-----~~~~~~~~~~------~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 68 DCERAICIDPAY-----SKAYGRMGLA------LSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCccC-----HHHHHHHHHH------HHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 999999999998 9999999999 99999999999999999999999999999999999998875
No 118
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.69 E-value=1.9e-17 Score=136.46 Aligned_cols=190 Identities=14% Similarity=0.068 Sum_probs=156.8
Q ss_pred cchhhcccCCchH----HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q psy13014 5 PYQQELSKNPSFL----YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFR 80 (229)
Q Consensus 5 ~~~~~l~~~p~~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (229)
.|+++++.+|+++ .+++.+|.++... |++++|...+++++.... .....+..+.++..+|.++..
T Consensus 70 ~~~~al~~~~~~~~~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~~----------~~~~~~~~~~~~~~l~~~~~~ 138 (411)
T 4a1s_A 70 FFQAAIQAGTEDLRTLSAIYSQLGNAYFYL-GDYNKAMQYHKHDLTLAK----------SMNDRLGEAKSSGNLGNTLKV 138 (411)
T ss_dssp HHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHH----------HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccChhHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHH----------HccCchHHHHHHHHHHHHHHH
Confidence 4677888888887 4788889999988 999999999988874322 112357888999999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCC-----------------hHHHHHHHHHHHhc
Q psy13014 81 LNQWSESLAKYNEALRSCPRSCS-VSRAVFYANRSAALEKLASYLSLEK-----------------PDQSILACSKAITL 142 (229)
Q Consensus 81 ~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~-----------------~~~A~~~~~~al~~ 142 (229)
.|++++|+.+|++++.+.+.... .....++.++|.+ +...|+ +++|+.++++++.+
T Consensus 139 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~------~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~ 212 (411)
T 4a1s_A 139 MGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNV------YHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKL 212 (411)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH------HHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999998432111 1237899999999 999999 99999999999886
Q ss_pred C------CCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHH------HHHHhccCchHHHhhhhhccccccccc-
Q psy13014 143 N------PSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRD------AYVATKVSPDLKLKEKNGATKLSPDVF- 209 (229)
Q Consensus 143 ~------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~l~~~~~~~~~~~~~a~~~~~~~~- 209 (229)
. +....++..+|.++...|++++|+.++++++++.|.... ++..++.++ ...+++.+|+..+.+++
T Consensus 213 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~ 291 (411)
T 4a1s_A 213 MRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSH-IFLGQFEDAAEHYKRTLA 291 (411)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HTTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-HHCcCHHHHHHHHHHHHH
Confidence 3 334568999999999999999999999999999876554 888999988 88889999999998887
Q ss_pred ccC
Q psy13014 210 LHP 212 (229)
Q Consensus 210 ~~p 212 (229)
+.|
T Consensus 292 ~~~ 294 (411)
T 4a1s_A 292 LAV 294 (411)
T ss_dssp HHH
T ss_pred HHH
Confidence 555
No 119
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.69 E-value=5.3e-17 Score=128.25 Aligned_cols=184 Identities=14% Similarity=0.075 Sum_probs=145.5
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy13014 14 PSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNE 93 (229)
Q Consensus 14 p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 93 (229)
|++...++.+|..++.. |++++|...|++++ ...|.++.++..+|.++...|++++|+..+++
T Consensus 1 p~~a~~~~~~g~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~ 63 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVG-RKYPEAAACYGRAI----------------TRNPLVAVYYTNRALCYLKMQQPEQALADCRR 63 (281)
T ss_dssp CCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HhCCccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 67788999999999999 99999999999988 56678889999999999999999999999999
Q ss_pred HHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcH-----HHHH-----------------
Q psy13014 94 ALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYL-----KVYQ----------------- 151 (229)
Q Consensus 94 al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~----------------- 151 (229)
++.++|++ ..+++++|.+ +..+|++++|+..|+++++++|++. ..+.
T Consensus 64 al~~~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (281)
T 2c2l_A 64 ALELDGQS-----VKAHFFLGQC------QLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERR 132 (281)
T ss_dssp HTTSCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 9999999999 9999999999999999999988652 1111
Q ss_pred ---------HHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc------------c
Q psy13014 152 ---------RRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF------------L 210 (229)
Q Consensus 152 ---------~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~------------~ 210 (229)
.++.. ..|++++|++.++++++.+|++......++.+.....+.+.++.+.|.++. .
T Consensus 133 ~~~~~~i~~~l~~l--~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a~~~~~~~~~~~~~~ 210 (281)
T 2c2l_A 133 IHQESELHSYLTRL--IAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKRKKRDIPDYLC 210 (281)
T ss_dssp CCCCCHHHHHHHHH--HHHHHHHHHTTTSGGGTTTSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHSSCTTSCCCCCSTTB
T ss_pred HhhhHHHHHHHHHH--HHHHHHHHHHHHHhhhccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccC
Confidence 11221 368999999999999999999988888887766322243444544443332 1
Q ss_pred cCCCcccccCCCCcCCC
Q psy13014 211 HPGQPQIQHNPETIHGG 227 (229)
Q Consensus 211 ~p~~~~~~~~~~~~~~~ 227 (229)
-|--..+..+|..+..|
T Consensus 211 c~i~~~~~~dPv~~~~g 227 (281)
T 2c2l_A 211 GKISFELMREPCITPSG 227 (281)
T ss_dssp CTTTCSBCSSEEECSSC
T ss_pred CcCcCCHhcCCeECCCC
Confidence 22333455566665554
No 120
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.69 E-value=1.6e-16 Score=120.30 Aligned_cols=168 Identities=11% Similarity=-0.019 Sum_probs=145.8
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHcc---
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLN--- 82 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--- 82 (229)
|+++.+ ..++.+++.+|.++... +++++|..+|+++.. ..++.+++.+|.++.. +
T Consensus 9 ~~~aa~--~g~~~a~~~lg~~~~~~-~~~~~A~~~~~~a~~------------------~g~~~a~~~lg~~y~~-~g~~ 66 (212)
T 3rjv_A 9 YQQQAE--AGDRRAQYYLADTWVSS-GDYQKAEYWAQKAAA------------------QGDGDALALLAQLKIR-NPQQ 66 (212)
T ss_dssp HHHHHH--TTCHHHHHHHHHHHHHH-TCHHHHHHHHHHHHH------------------TTCHHHHHHHHHHTTS-STTS
T ss_pred HHHHHH--CCCHHHHHHHHHHHhcC-CCHHHHHHHHHHHHH------------------cCCHHHHHHHHHHHHc-CCCC
Confidence 455554 47899999999999998 999999999998861 2467889999999998 7
Q ss_pred -CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhc----cCChHHHHHHHHHHHhcCC--CcHHHHHHHHH
Q psy13014 83 -QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLS----LEKPDQSILACSKAITLNP--SYLKVYQRRAR 155 (229)
Q Consensus 83 -~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p--~~~~~~~~la~ 155 (229)
++++|+..|+++.. +.+ +.+++++|.+ |.. .+++++|+.+|+++++..| .++.+++++|.
T Consensus 67 ~~~~~A~~~~~~A~~--~g~-----~~a~~~Lg~~------y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~ 133 (212)
T 3rjv_A 67 ADYPQARQLAEKAVE--AGS-----KSGEIVLARV------LVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGL 133 (212)
T ss_dssp CCHHHHHHHHHHHHH--TTC-----HHHHHHHHHH------HTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH--CCC-----HHHHHHHHHH------HHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 89999999999976 456 9999999999 988 8999999999999999988 45999999999
Q ss_pred HHHh----cccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHh-----hhhhccccccccc
Q psy13014 156 LYQQ----SDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLK-----EKNGATKLSPDVF 209 (229)
Q Consensus 156 ~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~-----~~~~a~~~~~~~~ 209 (229)
+|.. .+++++|+.+|+++++. |.++.+.++++.++....+ +..+|++.|.++.
T Consensus 134 ~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~ 195 (212)
T 3rjv_A 134 IYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSC 195 (212)
T ss_dssp HHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHH
Confidence 9999 88999999999999999 7778899999999843222 6888888887776
No 121
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.69 E-value=8.6e-17 Score=137.56 Aligned_cols=181 Identities=15% Similarity=0.046 Sum_probs=153.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHH-------hhhhhh-------hhHHHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFI-------LFSEIR-------TDCHQFERQVFYIQFIFHVLFYLFCSQ-KLEQTAI 69 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~-------~~~~~~-------~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 69 (229)
.|++++..+|+++.+++..|.++.. . |+++ +|...|++++ . ..|+...
T Consensus 260 ~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~-g~~~~a~~~~~~A~~~~~~Al----------------~~~~p~~~~ 322 (530)
T 2ooe_A 260 AYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEK-GDMNNAKLFSDEAANIYERAI----------------STLLKKNML 322 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHT----------------TTTCSSCHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhc-cchhhhhhhhHHHHHHHHHHH----------------HHhCcccHH
Confidence 5889999999999999999998876 5 8876 7888888776 3 3577888
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhH-HHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH
Q psy13014 70 SLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRA-VFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 70 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 148 (229)
+|..+|..+...|++++|...|++++...|.+ + .+|..+|.+ +...|++++|+..|+++++..|....
T Consensus 323 l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~~~~~~------~~~~~~~~~A~~~~~~Al~~~~~~~~ 391 (530)
T 2ooe_A 323 LYFAYADYEESRMKYEKVHSIYNRLLAIEDID-----PTLVYIQYMKF------ARRAEGIKSGRMIFKKAREDARTRHH 391 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSC-----HHHHHHHHHHH------HHHHHHHHHHHHHHHHHHTCTTCCTH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhCccccC-----chHHHHHHHHH------HHHhcCHHHHHHHHHHHHhccCCchH
Confidence 99999999999999999999999999999887 5 589999999 88888899999999999998888777
Q ss_pred HHHHHHHH-HHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCC
Q psy13014 149 VYQRRARL-YQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQ 214 (229)
Q Consensus 149 ~~~~la~~-~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~ 214 (229)
.+...+.+ +...|++++|...|+++++..|+++.++..++.+. .+.++..+|...|.+++ ..|.+
T Consensus 392 ~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~-~~~g~~~~Ar~~~~~al~~~~~~ 458 (530)
T 2ooe_A 392 VYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL-SHLNEDNNTRVLFERVLTSGSLP 458 (530)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-TTTTCHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH-HhCCCHhhHHHHHHHHHhccCCC
Confidence 77666655 34588999999999999999999999998888887 67788888888888888 55543
No 122
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.68 E-value=2.7e-16 Score=128.90 Aligned_cols=176 Identities=12% Similarity=0.031 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy13014 19 TIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSC 98 (229)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 98 (229)
.++.+|..+... |++++|...|++++.... .....+..+.+++.+|.++...|++++|+.++++++.+.
T Consensus 103 ~~~~~g~~~~~~-g~~~~A~~~~~~al~~~~----------~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~ 171 (378)
T 3q15_A 103 SLFFRGMYEFDQ-KEYVEAIGYYREAEKELP----------FVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIY 171 (378)
T ss_dssp HHHHHHHHHHHT-TCHHHHHHHHHHHHTTGG----------GCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-CCHHHHHHHHHHHHHHHh----------hCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 577889999999 999999999998873211 113457888999999999999999999999999999987
Q ss_pred CCCCc--hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCC------CcHHHHHHHHHHHHhcccHHHHHHHH
Q psy13014 99 PRSCS--VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNP------SYLKVYQRRARLYQQSDKLDEALADY 170 (229)
Q Consensus 99 p~~~~--~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~~~~~~A~~~~ 170 (229)
+.... ...+.++.++|.+ +..+|++++|+.++++++.+.+ ....++.++|.++...|++++|+.+|
T Consensus 172 ~~~~~~~~~~~~~~~~lg~~------y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~ 245 (378)
T 3q15_A 172 QNHPLYSIRTIQSLFVIAGN------YDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHF 245 (378)
T ss_dssp HTSTTCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HhCCCchhhHHHHHHHHHHH------HHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 65432 2357889999999 9999999999999999998742 12468999999999999999999999
Q ss_pred HHHHH-----hCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccC
Q psy13014 171 QKILE-----LDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHP 212 (229)
Q Consensus 171 ~~al~-----~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p 212 (229)
+++++ .+|....++.++|.++ .+.++..+|...+.+++ +.+
T Consensus 246 ~~al~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 246 QKAAKVSREKVPDLLPKVLFGLSWTL-CKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHCGGGHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCChhHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHH
Confidence 99999 8888899999999999 89999999999999988 544
No 123
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.68 E-value=1.9e-16 Score=125.40 Aligned_cols=144 Identities=6% Similarity=-0.038 Sum_probs=133.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+++++.+|+++.+++.+|.++... |++++|...+++++ ...|.........+..+...++.
T Consensus 139 ~~~~al~~~P~~~~a~~~la~~~~~~-g~~~~A~~~l~~~~----------------~~~p~~~~~~~~~~~~l~~~~~~ 201 (287)
T 3qou_A 139 LLXDAWQLSNQNGEIGLLLAETLIAL-NRSEDAEAVLXTIP----------------LQDQDTRYQGLVAQIELLXQAAD 201 (287)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHT-TCHHHHHHHHTTSC----------------GGGCSHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhCCcchhHHHHHHHHHHHC-CCHHHHHHHHHhCc----------------hhhcchHHHHHHHHHHHHhhccc
Confidence 47889999999999999999999999 99999999998876 45566667777888889999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc--HHHHHHHHHHHHhccc
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY--LKVYQRRARLYQQSDK 162 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~la~~~~~~~~ 162 (229)
.+|+..+++++..+|++ +.+++++|.+ +...|++++|+..|.+++..+|++ ..++.+++.++..+|+
T Consensus 202 ~~a~~~l~~al~~~P~~-----~~~~~~la~~------l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~ 270 (287)
T 3qou_A 202 TPEIQQLQQQVAENPED-----AALATQLALQ------LHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGT 270 (287)
T ss_dssp CHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCT
T ss_pred CccHHHHHHHHhcCCcc-----HHHHHHHHHH------HHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCC
Confidence 99999999999999999 9999999999 999999999999999999999998 8899999999999999
Q ss_pred HHHHHHHHHHHHHh
Q psy13014 163 LDEALADYQKILEL 176 (229)
Q Consensus 163 ~~~A~~~~~~al~~ 176 (229)
.++|+..|++++..
T Consensus 271 ~~~a~~~~r~al~~ 284 (287)
T 3qou_A 271 GDALASXYRRQLYA 284 (287)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 99999999998753
No 124
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.68 E-value=4.5e-17 Score=133.36 Aligned_cols=190 Identities=13% Similarity=0.072 Sum_probs=159.0
Q ss_pred cchhhcccCCchH----HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q psy13014 5 PYQQELSKNPSFL----YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFR 80 (229)
Q Consensus 5 ~~~~~l~~~p~~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (229)
.|+++++.+|+++ .+++.+|.++... |++++|...+++++.... .....+..+.++..+|.++..
T Consensus 31 ~~~~al~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~----------~~~~~~~~~~~~~~la~~~~~ 99 (406)
T 3sf4_A 31 FFEAAVQVGTEDLKTLSAIYSQLGNAYFYL-HDYAKALEYHHHDLTLAR----------TIGDQLGEAKASGNLGNTLKV 99 (406)
T ss_dssp HHHHHHHHCCSCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH----------HTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHH----------hccccHHHHHHHHHHHHHHHH
Confidence 4678888899884 5788899999999 999999999988874322 112457778899999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCC--------------------hHHHHHHHHHH
Q psy13014 81 LNQWSESLAKYNEALRSCPRSCS-VSRAVFYANRSAALEKLASYLSLEK--------------------PDQSILACSKA 139 (229)
Q Consensus 81 ~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~--------------------~~~A~~~~~~a 139 (229)
.|++++|+.++++++.+.|.... .....++..+|.+ +...|+ +++|+.++.++
T Consensus 100 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~------~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a 173 (406)
T 3sf4_A 100 LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNV------YHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEEN 173 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH------HHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999998765322 2246689999999 999999 99999999999
Q ss_pred Hhc------CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHH------HHHHhccCchHHHhhhhhccccccc
Q psy13014 140 ITL------NPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRD------AYVATKVSPDLKLKEKNGATKLSPD 207 (229)
Q Consensus 140 l~~------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~l~~~~~~~~~~~~~a~~~~~~ 207 (229)
+.+ .|....++..+|.++...|++++|+..+++++++.|.... ++..++.++ ...+++.+|+..+.+
T Consensus 174 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~ 252 (406)
T 3sf4_A 174 LSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAY-IFLGEFETASEYYKK 252 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHH
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-HHcCChHHHHHHHHH
Confidence 887 3445678999999999999999999999999998766554 888999998 888999999999988
Q ss_pred cc-ccC
Q psy13014 208 VF-LHP 212 (229)
Q Consensus 208 ~~-~~p 212 (229)
++ +.|
T Consensus 253 al~~~~ 258 (406)
T 3sf4_A 253 TLLLAR 258 (406)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 87 555
No 125
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.68 E-value=2.4e-16 Score=112.65 Aligned_cols=102 Identities=15% Similarity=0.180 Sum_probs=92.1
Q ss_pred HHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCC----------hHHHHHHHHHHHhcCCCcHH
Q psy13014 79 FRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEK----------PDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 79 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~----------~~~A~~~~~~al~~~p~~~~ 148 (229)
-+.+.|++|+..+++++.++|++ +.+|.++|.+ +..+++ +++|+..|+++|+++|++..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~-----aea~~n~G~~------l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~ 81 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLD-----ADNLTRWGGV------LLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDE 81 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCC-----HHHHHHHHHH------HHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHH
Confidence 35678999999999999999999 9999999999 666655 56999999999999999999
Q ss_pred HHHHHHHHHHhcc-----------cHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 149 VYQRRARLYQQSD-----------KLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 149 ~~~~la~~~~~~~-----------~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
+|+++|.+|..+| ++++|+.+|++|++++|++...+..+..+-
T Consensus 82 A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ 135 (158)
T 1zu2_A 82 AVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTA 135 (158)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999885 899999999999999999998887776553
No 126
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.68 E-value=5.4e-16 Score=130.58 Aligned_cols=152 Identities=9% Similarity=0.054 Sum_probs=124.4
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
.|+.+++.+|+....+..+|.+++.. |++++|+..|++++...+..... .........+....++.++|.++..+|++
T Consensus 256 ~~~~~~~~~~~~a~~~~~~G~~~~~~-g~~~~A~~~y~~Al~~~p~~~~~-~~~~~~~~~~~~~~~~~nla~~~~~~g~~ 333 (457)
T 1kt0_A 256 SWEMDTKEKLEQAAIVKEKGTVYFKG-GKYMQAVIQYGKIVSWLEMEYGL-SEKESKASESFLLAAFLNLAMCYLKLREY 333 (457)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHTTCCSC-CHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHhcccccC-ChHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 45667788899999999999999999 99999999999988433211000 00000112344578999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHH
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLD 164 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 164 (229)
++|+.+|++++.++|++ +.+++++|.+ +..+|++++|+.+|+++++++|++..++..++.++..+++++
T Consensus 334 ~~A~~~~~~al~~~p~~-----~~a~~~~g~a------~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 402 (457)
T 1kt0_A 334 TKAVECCDKALGLDSAN-----EKGLYRRGEA------QLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHN 402 (457)
T ss_dssp HHHHHHHHHHHHHSTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcc-----HHHHHHHHHH------HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q psy13014 165 EALAD 169 (229)
Q Consensus 165 ~A~~~ 169 (229)
+|...
T Consensus 403 ~a~~~ 407 (457)
T 1kt0_A 403 ERDRR 407 (457)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87754
No 127
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.67 E-value=8.8e-16 Score=106.36 Aligned_cols=126 Identities=13% Similarity=0.145 Sum_probs=117.4
Q ss_pred hcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHH
Q psy13014 9 ELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESL 88 (229)
Q Consensus 9 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~ 88 (229)
.....|.+..+++.+|.++... |++++|...|++++ ...|.++.++..+|.++...|++++|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al----------------~~~~~~~~~~~~la~~~~~~~~~~~A~ 70 (133)
T 2lni_A 8 HSHMNPDLALMVKNKGNECFQK-GDYPQAMKHYTEAI----------------KRNPKDAKLYSNRAACYTKLLEFQLAL 70 (133)
T ss_dssp TCCSSSCHHHHHHHHHHHHHHT-TCSHHHHHHHHHHH----------------TTCTTCHHHHHHHHHHHTTTTCHHHHH
T ss_pred CCCcCcccHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HcCCCcHHHHHHHHHHHHHhccHHHHH
Confidence 3456788999999999999999 99999999999888 566777899999999999999999999
Q ss_pred HHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhccc
Q psy13014 89 AKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDK 162 (229)
Q Consensus 89 ~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~ 162 (229)
..+++++..+|.+ +.++..+|.+ +...|++++|+.++++++..+|.+..++..++.++...|+
T Consensus 71 ~~~~~a~~~~~~~-----~~~~~~la~~------~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 71 KDCEECIQLEPTF-----IKGYTRKAAA------LEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCc-----hHHHHHHHHH------HHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 9999999999998 9999999999 9999999999999999999999999999999999988764
No 128
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.67 E-value=5.4e-17 Score=118.97 Aligned_cols=127 Identities=20% Similarity=0.229 Sum_probs=116.5
Q ss_pred HHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHH-
Q psy13014 78 LFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARL- 156 (229)
Q Consensus 78 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~- 156 (229)
+...|++++|+..+++++..+|.+ +.++..+|.+ +...|++++|+.+|+++++++|+++.++..+|.+
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l 88 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRANPQN-----SEQWALLGEY------YLWQNDYSNSLLAYRQALQLRGENAELYAALATVL 88 (177)
T ss_dssp CC-----CCCCHHHHHHHHHCCSC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 456789999999999999999999 9999999999 9999999999999999999999999999999999
Q ss_pred HHhcccH--HHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 157 YQQSDKL--DEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 157 ~~~~~~~--~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
+...|++ ++|+..++++++.+|++..++..++.++ ...+++.+|+..+.+++ ++|++..
T Consensus 89 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~-~~~g~~~~A~~~~~~al~~~p~~~~ 150 (177)
T 2e2e_A 89 YYQASQHMTAQTRAMIDKALALDSNEITALMLLASDA-FMQANYAQAIELWQKVMDLNSPRIN 150 (177)
T ss_dssp HHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTCCTTSC
T ss_pred HHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHcccHHHHHHHHHHHHhhCCCCcc
Confidence 8899999 9999999999999999999999999999 88999999999999999 9987643
No 129
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.67 E-value=5.9e-16 Score=112.16 Aligned_cols=121 Identities=10% Similarity=-0.028 Sum_probs=111.7
Q ss_pred ccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHH
Q psy13014 11 SKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAK 90 (229)
Q Consensus 11 ~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 90 (229)
..++.+...++.+|.+++.. |++++|+..|++++ ...|.++.+++.+|.++...|++++|+..
T Consensus 5 ~~~~~~a~~~~~~g~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 67 (164)
T 3sz7_A 5 MAPTPESDKLKSEGNAAMAR-KEYSKAIDLYTQAL----------------SIAPANPIYLSNRAAAYSASGQHEKAAED 67 (164)
T ss_dssp SSCCHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHSTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred chhhhhHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HhCCcCHHHHHHHHHHHHHccCHHHHHHH
Confidence 45778899999999999999 99999999999988 56678899999999999999999999999
Q ss_pred HHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy13014 91 YNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQ 159 (229)
Q Consensus 91 ~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 159 (229)
|++++.++|.+ +.+++++|.+ +..+|++++|+.+|+++++++|++..+++.++.....
T Consensus 68 ~~~al~~~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 68 AELATVVDPKY-----SKAWSRLGLA------RFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp HHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHHHhCCCC-----HHHHHHHHHH------HHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Confidence 99999999999 9999999999 9999999999999999999999999887777765443
No 130
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=7.3e-16 Score=108.87 Aligned_cols=120 Identities=30% Similarity=0.398 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC
Q psy13014 64 LEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN 143 (229)
Q Consensus 64 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 143 (229)
.+..+..++.+|..++..|++++|+..|++++..+|++ .....++.++|.+ +...|++++|+..+++++.++
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~~~ 95 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP--QDQAVLHRNRAAC------HLKLEDYDKAETEASKAIEKD 95 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH--HHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc--hHHHHHHHHHHHH------HHHHccHHHHHHHHHHHHhhC
Confidence 45677889999999999999999999999999999863 1236889999999 999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 144 PSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 144 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
|+++.+++.+|.++...|++++|+.+|+++++++|++..++..++.+.
T Consensus 96 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 96 GGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988777654
No 131
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.66 E-value=7.5e-16 Score=126.21 Aligned_cols=149 Identities=11% Similarity=-0.037 Sum_probs=126.6
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy13014 14 PSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNE 93 (229)
Q Consensus 14 p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 93 (229)
|....+++.+|.++... |++..|..++++++...+.. ....+..+.++..+|.++...|++++|+.+|++
T Consensus 138 ~~~a~~~~~lg~~y~~~-~~~~~A~~~~~~al~~~~~~---------~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~ 207 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHM-KQTHVSMYHILQALDIYQNH---------PLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEA 207 (378)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHTS---------TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHhC---------CCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 34567899999999999 99999999999887443200 011346788999999999999999999999999
Q ss_pred HHHhCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh-----cCCCcHHHHHHHHHHHHhcccHHHHH
Q psy13014 94 ALRSCPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT-----LNPSYLKVYQRRARLYQQSDKLDEAL 167 (229)
Q Consensus 94 al~~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~la~~~~~~~~~~~A~ 167 (229)
++.+.+.... .....++.++|.+ +..+|++++|+.++++++. .+|..+.+++++|.++...|++++|+
T Consensus 208 al~~~~~~~~~~~~~~~~~~lg~~------y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 281 (378)
T 3q15_A 208 ALELAMDIQNDRFIAISLLNIANS------YDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAF 281 (378)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHH------HHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHH
Confidence 9998543222 2346789999999 9999999999999999999 78888999999999999999999999
Q ss_pred HHHHHHHHhCC
Q psy13014 168 ADYQKILELDP 178 (229)
Q Consensus 168 ~~~~~al~~~p 178 (229)
.++++++++.+
T Consensus 282 ~~~~~al~~~~ 292 (378)
T 3q15_A 282 QFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHHH
Confidence 99999999854
No 132
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.66 E-value=3.1e-16 Score=121.96 Aligned_cols=164 Identities=18% Similarity=0.143 Sum_probs=140.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CCCCchhh
Q psy13014 32 SEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSC-----PRSCSVSR 106 (229)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~~~~~~~ 106 (229)
|++++|...|++++....... ....+..+.++..+|.++...|++++|+.+|++++.+. ++. ...
T Consensus 15 ~~~~~A~~~~~~al~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--~~~ 84 (283)
T 3edt_B 15 VPRGSAVPLCKQALEDLEKTS--------GHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDH--PAV 84 (283)
T ss_dssp SCSSSHHHHHHHHHHHHHHHH--------CSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTC--HHH
T ss_pred CCHHHHHHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcc--hHH
Confidence 788889998888875433111 12347889999999999999999999999999999884 221 223
Q ss_pred HHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHh--
Q psy13014 107 AVFYANRSAALEKLASYLSLEKPDQSILACSKAITL--------NPSYLKVYQRRARLYQQSDKLDEALADYQKILEL-- 176 (229)
Q Consensus 107 ~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-- 176 (229)
..++.++|.+ +...|++++|+.++.+++.+ +|....++.++|.++...|++++|+..+++++.+
T Consensus 85 ~~~~~~l~~~------~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 158 (283)
T 3edt_B 85 AATLNNLAVL------YGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYA 158 (283)
T ss_dssp HHHHHHHHHH------HHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH------HHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 7899999999 99999999999999999998 4677889999999999999999999999999999
Q ss_pred ------CCCcHHHHHHhccCchHHHhhhhhccccccccc-ccC
Q psy13014 177 ------DPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHP 212 (229)
Q Consensus 177 ------~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p 212 (229)
+|....++..++.++ ...+++.+|+..+.+++ +.|
T Consensus 159 ~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 159 TRLGPDDPNVAKTKNNLASCY-LKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp HHSCTTCHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHH
Confidence 787888999999999 88999999999999988 544
No 133
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.66 E-value=1.1e-16 Score=131.82 Aligned_cols=189 Identities=10% Similarity=0.087 Sum_probs=154.6
Q ss_pred chhhccc------CCchHHHHHHHHHHHHHhhhh-----------------hhhhHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy13014 6 YQQELSK------NPSFLYTIYFSCFILFILFSE-----------------IRTDCHQFERQVFYIQFIFHVLFYLFCSQ 62 (229)
Q Consensus 6 ~~~~l~~------~p~~~~~~~~~~~~~~~~~~~-----------------~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (229)
|+++++. .|....++..+|.++... |+ +++|..++++++.... ...
T Consensus 149 ~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~----------~~~ 217 (411)
T 4a1s_A 149 CERHLTLARQLGDRLSEGRALYNLGNVYHAK-GKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMR----------DLG 217 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH-HHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHH----------HHT
T ss_pred HHHHHHHHHHhhchHHHHHHHHHHHHHHHHc-CcccccccchhhhhhhhHHHHHHHHHHHHHHHHHH----------HcC
Confidence 4555555 567778899999999999 99 7777777776653322 113
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
..+..+.++..+|.++...|++++|+.++++++.+.+.... .....++.++|.+ +...|++++|+.++++++.
T Consensus 218 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~------~~~~g~~~~A~~~~~~al~ 291 (411)
T 4a1s_A 218 DRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNS------HIFLGQFEDAAEHYKRTLA 291 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HHTTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH------HHHCcCHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999998775422 2235589999999 9999999999999999999
Q ss_pred cCCCc------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCc------HHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 142 LNPSY------LKVYQRRARLYQQSDKLDEALADYQKILELDPNN------RDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 142 ~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
+.|.. ..++..+|.++...|++++|+.++++++.+.+.. ..++..++.++ ...++..+|...+.+++
T Consensus 292 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al 370 (411)
T 4a1s_A 292 LAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAH-SAIGGHERALKYAEQHL 370 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHH-HHhccHHHHHHHHHHHH
Confidence 87644 6789999999999999999999999999986543 45888999998 88899999999988887
Q ss_pred -ccC
Q psy13014 210 -LHP 212 (229)
Q Consensus 210 -~~p 212 (229)
+.+
T Consensus 371 ~~~~ 374 (411)
T 4a1s_A 371 QLAX 374 (411)
T ss_dssp HHCC
T ss_pred HHHh
Confidence 554
No 134
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.66 E-value=1.4e-16 Score=126.66 Aligned_cols=190 Identities=13% Similarity=0.071 Sum_probs=157.2
Q ss_pred cchhhcccCCchH----HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q psy13014 5 PYQQELSKNPSFL----YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFR 80 (229)
Q Consensus 5 ~~~~~l~~~p~~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (229)
.|+++++.+|+++ .++..+|.++... |++++|...+++++..... ....+..+.++..+|.++..
T Consensus 27 ~~~~al~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~l~~~~~~ 95 (338)
T 3ro2_A 27 FFEAAVQVGTEDLKTLSAIYSQLGNAYFYL-HDYAKALEYHHHDLTLART----------IGDQLGEAKASGNLGNTLKV 95 (338)
T ss_dssp HHHHHHHHCCSCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCcccHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHhhc----------ccccHHHHHHHHHHHHHHHH
Confidence 4778888899884 6788899999999 9999999999888743221 12456778899999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCC--------------------hHHHHHHHHHH
Q psy13014 81 LNQWSESLAKYNEALRSCPRSCS-VSRAVFYANRSAALEKLASYLSLEK--------------------PDQSILACSKA 139 (229)
Q Consensus 81 ~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~--------------------~~~A~~~~~~a 139 (229)
.|++++|+..+++++.+.+.... .....++..+|.+ +...|+ +++|+..++++
T Consensus 96 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a 169 (338)
T 3ro2_A 96 LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNV------YHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEEN 169 (338)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------HHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH------HHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999998765422 2246689999999 999999 99999999999
Q ss_pred Hhc------CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHH------HHHHhccCchHHHhhhhhccccccc
Q psy13014 140 ITL------NPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRD------AYVATKVSPDLKLKEKNGATKLSPD 207 (229)
Q Consensus 140 l~~------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~l~~~~~~~~~~~~~a~~~~~~ 207 (229)
+.+ .|....++..+|.++...|++++|+..+++++++.|.... ++..++.++ ...+++.+|.+.+.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~ 248 (338)
T 3ro2_A 170 LSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAY-IFLGEFETASEYYKK 248 (338)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH-HHcCCHHHHHHHHHH
Confidence 876 3344668999999999999999999999999988665443 888899888 888999999998888
Q ss_pred cc-ccC
Q psy13014 208 VF-LHP 212 (229)
Q Consensus 208 ~~-~~p 212 (229)
++ +.|
T Consensus 249 al~~~~ 254 (338)
T 3ro2_A 249 TLLLAR 254 (338)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 87 554
No 135
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.66 E-value=1.9e-16 Score=129.61 Aligned_cols=188 Identities=12% Similarity=0.131 Sum_probs=153.5
Q ss_pred chhhcccCCch------HHHHHHHHHHHHHhhhh--------------------hhhhHHHHHHHHHHHHHHHHHHHhhh
Q psy13014 6 YQQELSKNPSF------LYTIYFSCFILFILFSE--------------------IRTDCHQFERQVFYIQFIFHVLFYLF 59 (229)
Q Consensus 6 ~~~~l~~~p~~------~~~~~~~~~~~~~~~~~--------------------~~~a~~~~~~~~~~~~~~~~~~~~~~ 59 (229)
|+++++..|.. ..++..+|.++... |+ +++|...+++++....
T Consensus 110 ~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~---------- 178 (406)
T 3sf4_A 110 CQRHLDISRELNDKVGEARALYNLGNVYHAK-GKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVT---------- 178 (406)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH-HHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHhcccccchHHHHHHHHHHHHHc-CCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHH----------
Confidence 45555554443 45888899999999 99 7777777776653322
Q ss_pred hhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHH
Q psy13014 60 CSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSK 138 (229)
Q Consensus 60 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~ 138 (229)
.....+..+.++..+|.++...|++++|+.++++++.+.+.... .....++.++|.+ +...|++++|+.++++
T Consensus 179 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~------~~~~g~~~~A~~~~~~ 252 (406)
T 3sf4_A 179 ALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNA------YIFLGEFETASEYYKK 252 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHH
T ss_pred hccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH------HHHcCChHHHHHHHHH
Confidence 12345677889999999999999999999999999998765432 2245689999999 9999999999999999
Q ss_pred HHhcCCCc------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCc------HHHHHHhccCchHHHhhhhhcccccc
Q psy13014 139 AITLNPSY------LKVYQRRARLYQQSDKLDEALADYQKILELDPNN------RDAYVATKVSPDLKLKEKNGATKLSP 206 (229)
Q Consensus 139 al~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~~~~~a~~~~~ 206 (229)
++.+.|.. ..++..+|.++...|++++|+..+++++++.+.. ..++..++.++ ...+++.+|+..+.
T Consensus 253 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~ 331 (406)
T 3sf4_A 253 TLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAY-TALGNHDQAMHFAE 331 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHH
T ss_pred HHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-HHcCCHHHHHHHHH
Confidence 99887655 7789999999999999999999999999986554 56888999998 88899999999988
Q ss_pred ccc-cc
Q psy13014 207 DVF-LH 211 (229)
Q Consensus 207 ~~~-~~ 211 (229)
+++ +.
T Consensus 332 ~al~~~ 337 (406)
T 3sf4_A 332 KHLEIS 337 (406)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887 53
No 136
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.66 E-value=2.8e-16 Score=105.54 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS 145 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 145 (229)
.++.++..+|.++...|++++|+..|++++..+|.+ ..++..+|.+ +...|++++|+.+++++++.+|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEE-----SKYWLMKGKA------LYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCC-----HHHHHHHHHH------HHHccCHHHHHHHHHHHHHhCcc
Confidence 345667889999999999999999999999999998 9999999999 99999999999999999999999
Q ss_pred --cHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHhCCCcH
Q psy13014 146 --YLKVYQRRARLYQQS-DKLDEALADYQKILELDPNNR 181 (229)
Q Consensus 146 --~~~~~~~la~~~~~~-~~~~~A~~~~~~al~~~p~~~ 181 (229)
+..+++.+|.++... |++++|++++++++...|.++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 73 EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999999999999999 999999999999999999764
No 137
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.66 E-value=5.7e-16 Score=123.71 Aligned_cols=173 Identities=14% Similarity=0.115 Sum_probs=134.2
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCC
Q psy13014 23 SCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSC 102 (229)
Q Consensus 23 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~ 102 (229)
.|.++... |++++|...|.+++..... .......+.++..+|.++..+|++++|+.+|++++.+.+...
T Consensus 42 a~~~~~~~-g~~~~A~~~~~~al~~~~~----------~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g 110 (307)
T 2ifu_A 42 AAVAFKNA-KQLEQAKDAYLQEAEAHAN----------NRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG 110 (307)
T ss_dssp HHHHHHHT-TCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT
T ss_pred HHHHHHHc-CCHHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC
Confidence 45667777 9999999999888743221 123345677888999999999999999999999998865433
Q ss_pred ch-hhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc------HHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy13014 103 SV-SRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY------LKVYQRRARLYQQSDKLDEALADYQKILE 175 (229)
Q Consensus 103 ~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~ 175 (229)
.. ....++.++|.+ |.. |++++|+.+|++++.+.|.. ..++.++|.++..+|++++|+..|++++.
T Consensus 111 ~~~~~a~~~~~lg~~------~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 183 (307)
T 2ifu_A 111 TPDTAAMALDRAGKL------MEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKS 183 (307)
T ss_dssp CHHHHHHHHHHHHHH------HTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH------HHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 22 236788889999 888 99999999999999887643 56788999999999999999999999998
Q ss_pred hCCCcH------HHHHHhccCchHHHhhhhhcccccccccccCCC
Q psy13014 176 LDPNNR------DAYVATKVSPDLKLKEKNGATKLSPDVFLHPGQ 214 (229)
Q Consensus 176 ~~p~~~------~~~~~l~~~~~~~~~~~~~a~~~~~~~~~~p~~ 214 (229)
+.|.+. ..+..++.++ ..+++..+|+..+.+++++|..
T Consensus 184 ~~~~~~~~~~~~~~~~~~g~~~-~~~g~~~~A~~~~~~al~~p~~ 227 (307)
T 2ifu_A 184 MYKEMENYPTCYKKCIAQVLVQ-LHRADYVAAQKCVRESYSIPGF 227 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHTTSTTS
T ss_pred HHHHcCChhHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHhCCCCC
Confidence 866542 3666777776 6778888888888888766643
No 138
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.65 E-value=9.2e-16 Score=123.70 Aligned_cols=158 Identities=13% Similarity=0.077 Sum_probs=146.9
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhh-hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHc-c-
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFS-EIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRL-N- 82 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~- 82 (229)
+.++|.+||++..++..++.++..+ + .++++...+++.+ ...|++..+|...+.+.... +
T Consensus 77 t~~~L~~nP~~ytaWn~R~~iL~~l-~~~l~eEL~~~~~~L----------------~~nPKny~aW~hR~wlL~~l~~~ 139 (349)
T 3q7a_A 77 TEIIVRMNPAHYTVWQYRFSLLTSL-NKSLEDELRLMNEFA----------------VQNLKSYQVWHHRLLLLDRISPQ 139 (349)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHT-TCCHHHHHHHHHHHH----------------HTTCCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHh-hhhHHHHHHHHHHHH----------------HhCCCcHHHHHHHHHHHHHhcCC
Confidence 5679999999999999999999998 8 5999999998887 68899999999999999998 7
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChH--------HHHHHHHHHHhcCCCcHHHHHHHH
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPD--------QSILACSKAITLNPSYLKVYQRRA 154 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~--------~A~~~~~~al~~~p~~~~~~~~la 154 (229)
++++++.++.+++..+|.+ ..+|.+++.+ ....+.++ +++++++++++.+|.|..+|..++
T Consensus 140 ~~~~EL~~~~k~L~~dpkN-----y~AW~~R~wv------l~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~ 208 (349)
T 3q7a_A 140 DPVSEIEYIHGSLLPDPKN-----YHTWAYLHWL------YSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRW 208 (349)
T ss_dssp CCHHHHHHHHHHTSSCTTC-----HHHHHHHHHH------HHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 8999999999999999999 9999999999 66666666 999999999999999999999999
Q ss_pred HHHHhccc-------HHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 155 RLYQQSDK-------LDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 155 ~~~~~~~~-------~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
.++..+++ ++++++++.+++.++|+|..+|..+..++
T Consensus 209 ~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll 252 (349)
T 3q7a_A 209 YLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFL 252 (349)
T ss_dssp HHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHhccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999987 79999999999999999999999888777
No 139
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.65 E-value=1.3e-15 Score=113.80 Aligned_cols=156 Identities=9% Similarity=0.037 Sum_probs=117.9
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHH
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWS 85 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 85 (229)
|.......+.....+..+|..++.. |++++|...|.+++...+................-...++..+|.++...|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 105 (198)
T 2fbn_A 27 YDYTDEEKVQSAFDIKEEGNEFFKK-NEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYP 105 (198)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 3334444556677899999999999 999999999998873211000000000000001112478999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHH
Q psy13014 86 ESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDE 165 (229)
Q Consensus 86 ~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~ 165 (229)
+|+.++++++.++|.+ ..+++.+|.+ +..+|++++|+.+|+++++++|++..++..++.++..+++.++
T Consensus 106 ~A~~~~~~al~~~p~~-----~~~~~~lg~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 174 (198)
T 2fbn_A 106 KAIDHASKVLKIDKNN-----VKALYKLGVA------NMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARK 174 (198)
T ss_dssp HHHHHHHHHHHHSTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCccc-----HHHHHHHHHH------HHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999 9999999999999999999999999999999999999999888
Q ss_pred HH-HHHHHH
Q psy13014 166 AL-ADYQKI 173 (229)
Q Consensus 166 A~-~~~~~a 173 (229)
+. ..|.+.
T Consensus 175 ~~~~~~~~~ 183 (198)
T 2fbn_A 175 KDKLTFGGM 183 (198)
T ss_dssp ---------
T ss_pred HHHHHHHHH
Confidence 77 444333
No 140
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.64 E-value=6.6e-15 Score=106.35 Aligned_cols=139 Identities=8% Similarity=0.003 Sum_probs=113.1
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHH--hhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHH
Q psy13014 15 SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLF--YLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYN 92 (229)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~ 92 (229)
.....+...|..++.. |++++|+..|.+++.........-. ........|..+.++.++|.++..+|++++|+..++
T Consensus 9 ~~a~~~~~~G~~~~~~-~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 87 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQ-KDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSS 87 (162)
T ss_dssp HHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3466788899999999 9999999999998855432211000 000001267788999999999999999999999999
Q ss_pred HHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcH-HHHHHHHHHHHhcccHHH
Q psy13014 93 EALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYL-KVYQRRARLYQQSDKLDE 165 (229)
Q Consensus 93 ~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~la~~~~~~~~~~~ 165 (229)
+++.++|.+ +.+++.+|.+ +..+|++++|+.+|++++.++|++. .+...++.+....++..+
T Consensus 88 ~al~~~p~~-----~~a~~~~g~~------~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~ 150 (162)
T 3rkv_A 88 EVLKREETN-----EKALFRRAKA------RIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKA 150 (162)
T ss_dssp HHHHHSTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCcc-----hHHHHHHHHH------HHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 9999999999 9999999999999999999999998 667778877776665543
No 141
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.64 E-value=1.7e-16 Score=110.50 Aligned_cols=101 Identities=19% Similarity=0.207 Sum_probs=92.6
Q ss_pred hHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcH----
Q psy13014 106 RAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNR---- 181 (229)
Q Consensus 106 ~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~---- 181 (229)
.+.++.++|.+ ++..|+|++|+.+|+++++++|+++.+|.++|.++..+|++++|+..|+++++++|++.
T Consensus 7 ~A~a~~~lG~~------~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 80 (127)
T 4gcn_A 7 AAIAEKDLGNA------AYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYK 80 (127)
T ss_dssp HHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhH
Confidence 47789999999 99999999999999999999999999999999999999999999999999999998764
Q ss_pred ---HHHHHhccCchHHHhhhhhccccccccc-ccCC
Q psy13014 182 ---DAYVATKVSPDLKLKEKNGATKLSPDVF-LHPG 213 (229)
Q Consensus 182 ---~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~ 213 (229)
.++.++|.++ ..++++.+|++.|.+++ ..|+
T Consensus 81 ~~a~~~~~lg~~~-~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 81 LIAKAMSRAGNAF-QKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhhCcC
Confidence 4677888887 88899999999999998 6653
No 142
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.63 E-value=4.6e-16 Score=123.60 Aligned_cols=178 Identities=11% Similarity=0.123 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHhhhh--------------------hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q psy13014 17 LYTIYFSCFILFILFSE--------------------IRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGN 76 (229)
Q Consensus 17 ~~~~~~~~~~~~~~~~~--------------------~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 76 (229)
..++..+|.++... |+ +++|...+++++.... .....+..+.++..+|.
T Consensus 123 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~----------~~~~~~~~~~~~~~l~~ 191 (338)
T 3ro2_A 123 ARALYNLGNVYHAK-GKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVT----------ALGDRAAQGRAFGNLGN 191 (338)
T ss_dssp HHHHHHHHHHHHHH-HHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHH----------HHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH----------hcCCHHHHHHHHHHHHH
Confidence 34788899999999 99 7777777766653322 11345677889999999
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc------HHH
Q psy13014 77 ALFRLNQWSESLAKYNEALRSCPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY------LKV 149 (229)
Q Consensus 77 ~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~ 149 (229)
++...|++++|+..+++++...+.... .....++..+|.+ +...|++++|+..+++++.+.+.. ..+
T Consensus 192 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~------~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 265 (338)
T 3ro2_A 192 THYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNA------YIFLGEFETASEYYKKTLLLARQLKDRAVEAQS 265 (338)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHH
Confidence 999999999999999999998664322 2245689999999 999999999999999999886654 678
Q ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhCCCc------HHHHHHhccCchHHHhhhhhccccccccc-ccC
Q psy13014 150 YQRRARLYQQSDKLDEALADYQKILELDPNN------RDAYVATKVSPDLKLKEKNGATKLSPDVF-LHP 212 (229)
Q Consensus 150 ~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p 212 (229)
+..+|.++...|++++|+..+++++++.+.. ..++..++.++ ...+++.+|...+.+++ +.+
T Consensus 266 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~~ 334 (338)
T 3ro2_A 266 CYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHLEISR 334 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-HHcCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999886654 44788899998 88999999999998887 554
No 143
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.63 E-value=1.1e-14 Score=99.41 Aligned_cols=122 Identities=19% Similarity=0.244 Sum_probs=109.0
Q ss_pred cCCch-HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHH
Q psy13014 12 KNPSF-LYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAK 90 (229)
Q Consensus 12 ~~p~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 90 (229)
.+|.. ..+++.+|.++... |++++|...+++.+ ...|..+.++..+|.++...|++++|+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 65 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYYKQ-GDYDEAIEYYQKAL----------------ELDPNNAEAWYNLGNAYYKQGDYDEAIEY 65 (125)
T ss_dssp ----CHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHc-CCHHHHHHHHHHHH----------------HHCcCcHHHHHHHHHHHHHhCCHHHHHHH
Confidence 45655 78899999999999 99999999999887 34566678899999999999999999999
Q ss_pred HHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Q psy13014 91 YNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSD 161 (229)
Q Consensus 91 ~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~ 161 (229)
+++++...|.+ ..++..+|.+ +...|++++|+..+++++..+|+++.++..+|.++...|
T Consensus 66 ~~~~~~~~~~~-----~~~~~~la~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 66 YQKALELDPNN-----AEAWYNLGNA------YYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCcc-----HHHHHHHHHH------HHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 99999999998 9999999999 999999999999999999999999999999999987654
No 144
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.63 E-value=2.9e-16 Score=127.25 Aligned_cols=165 Identities=14% Similarity=0.091 Sum_probs=96.2
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHHHHHHHHccC
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFC--SQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
+...++..++....++.+|..++.. |++.+|...|++++...+...... .... .....-...+++++|.++..+|+
T Consensus 168 ~~~~~~~~~~~a~~~~~~g~~~~~~-g~~~~A~~~y~~Al~~~p~~~~~~-~~~~~~~~~~~l~~~~~~nla~~~~~~g~ 245 (338)
T 2if4_A 168 SDMTVEERIGAADRRKMDGNSLFKE-EKLEEAMQQYEMAIAYMGDDFMFQ-LYGKYQDMALAVKNPCHLNIAACLIKLKR 245 (338)
T ss_dssp TBCCHHHHHHHHHHHHHHHHHTCSS-SCCHHHHHHHHHHHHHSCHHHHHT-CCHHHHHHHHHHHTHHHHHHHHHHHTTTC
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHhccchhhh-hcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3444555677888899999999999 999999999998874322111000 0000 00001112489999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHH-HHhccc
Q psy13014 84 WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARL-YQQSDK 162 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~-~~~~~~ 162 (229)
|++|+.+|++++.++|.+ ..+++++|.+ +..+|++++|+.+|+++++++|++..++..++.+ ....+.
T Consensus 246 ~~~A~~~~~~al~~~p~~-----~~a~~~lg~a------~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~ 314 (338)
T 2if4_A 246 YDEAIGHCNIVLTEEEKN-----PKALFRRGKA------KAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKAL 314 (338)
T ss_dssp CHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHTTTCHHHHHHHHHHTTC----------------------
T ss_pred HHHHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 9999999999 9999999999999999999999999999999998 445677
Q ss_pred HHHHHHHHHHHHHhCCCcHHH
Q psy13014 163 LDEALADYQKILELDPNNRDA 183 (229)
Q Consensus 163 ~~~A~~~~~~al~~~p~~~~~ 183 (229)
.+++...|.+++...|+++..
T Consensus 315 ~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 315 YQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp ---------------------
T ss_pred HHHHHHHHHHhhCCCCCCCCC
Confidence 888999999999999987643
No 145
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.63 E-value=7.1e-16 Score=106.47 Aligned_cols=102 Identities=17% Similarity=0.106 Sum_probs=91.7
Q ss_pred HHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHh
Q psy13014 108 VFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVAT 187 (229)
Q Consensus 108 ~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 187 (229)
..++.+|.+ +...|++++|+..|+++++.+|+++.+|+.+|.++...|++++|+..|+++++++|++..++..+
T Consensus 18 ~~~~~~g~~------~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~l 91 (121)
T 1hxi_A 18 ENPMEEGLS------MLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAAL 91 (121)
T ss_dssp SCHHHHHHH------HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hhHHHHHHH------HHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 347889999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 188 KVSPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 188 ~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
+.++ ...+++.+|+..+.+++ ++|++..
T Consensus 92 a~~~-~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 92 AVSH-TNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHC-------
T ss_pred HHHH-HHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999 89999999999999999 8887653
No 146
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.62 E-value=3.7e-16 Score=111.90 Aligned_cols=107 Identities=14% Similarity=0.108 Sum_probs=99.8
Q ss_pred HHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC-------cHH-----HHHHHHHHHHhcccHHHHHHHHHHHH
Q psy13014 107 AVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS-------YLK-----VYQRRARLYQQSDKLDEALADYQKIL 174 (229)
Q Consensus 107 ~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-------~~~-----~~~~la~~~~~~~~~~~A~~~~~~al 174 (229)
+..+.++|.. ++..|+|++|+..|+++++++|+ +.. +|.++|.++..+|++++|+.+|++++
T Consensus 11 a~~~~~~G~~------l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL 84 (159)
T 2hr2_A 11 AYLALSDAQR------QLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKAL 84 (159)
T ss_dssp HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH------HHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 6778999999 99999999999999999999999 444 99999999999999999999999999
Q ss_pred Hh-------CCCcHHHH----HHhccCchHHHhhhhhccccccccc-ccCCCcccccC
Q psy13014 175 EL-------DPNNRDAY----VATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQHN 220 (229)
Q Consensus 175 ~~-------~p~~~~~~----~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~~~ 220 (229)
++ +|++..+| +++|.++ ..++++.+|+..|.+++ ++|++..+...
T Consensus 85 ~l~n~~~e~~pd~~~A~~~~~~~rG~aL-~~lgr~eEAl~~y~kAlel~p~d~~~~~~ 141 (159)
T 2hr2_A 85 HYFNRRGELNQDEGKLWISAVYSRALAL-DGLGRGAEAMPEFKKVVEMIEERKGETPG 141 (159)
T ss_dssp HHHHHHCCTTSTHHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHCCSCCTT
T ss_pred HhhhccccCCCchHHHHHHHHHhHHHHH-HHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 99 99999999 9999999 99999999999999999 99987766543
No 147
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.62 E-value=5e-15 Score=103.50 Aligned_cols=125 Identities=13% Similarity=0.039 Sum_probs=110.4
Q ss_pred ccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHH
Q psy13014 11 SKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAK 90 (229)
Q Consensus 11 ~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 90 (229)
..+|.++..++.+|.+++.. |++++|...|++++ ...|.++.++..+|.++...|++++|+..
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~al----------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 65 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVG-RKYPEAAACYGRAI----------------TRNPLVAVYYTNRALCYLKMQQPEQALAD 65 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHh-CcHHHHHHHHHHHH----------------hhCcCcHHHHHHHHHHHHHhcCHHHHHHH
Confidence 46788999999999999999 99999999999988 56677889999999999999999999999
Q ss_pred HHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC-----cHHHHHHHHHHHHhcccH
Q psy13014 91 YNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS-----YLKVYQRRARLYQQSDKL 163 (229)
Q Consensus 91 ~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~la~~~~~~~~~ 163 (229)
+++++.++|.+ +.++..+|.+ +..+|++++|+.+|++++.++|+ +..+...+..+.......
T Consensus 66 ~~~al~~~p~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 132 (137)
T 3q49_B 66 CRRALELDGQS-----VKAHFFLGQC------QLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNS 132 (137)
T ss_dssp HHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCchh-----HHHHHHHHHH------HHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 9999999999 99999999999999999999988 666776676666554443
No 148
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.62 E-value=3.3e-16 Score=107.28 Aligned_cols=96 Identities=11% Similarity=0.107 Sum_probs=86.5
Q ss_pred HccCHHHHHHHHHHHHHh---CCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q psy13014 80 RLNQWSESLAKYNEALRS---CPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARL 156 (229)
Q Consensus 80 ~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 156 (229)
.+|++++|+.+|++++.+ +|.+ +.++.++|.+ +..+|++++|+.+|+++++++|+++.+++++|.+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~-----~~~~~~lg~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 70 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDL-----AECYLGLGST------FRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMV 70 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHH-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccH-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 468999999999999999 4766 8999999999 9999999999999999999999999999999999
Q ss_pred HHhcccHHHHHHHHHHHHHhCCCcHHHHHH
Q psy13014 157 YQQSDKLDEALADYQKILELDPNNRDAYVA 186 (229)
Q Consensus 157 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 186 (229)
+..+|++++|+..+++++..+|+++.....
T Consensus 71 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 100 (117)
T 3k9i_A 71 LYNLGRYEQGVELLLKIIAETSDDETIQSY 100 (117)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHCCCHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 999999999999999999999999887643
No 149
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.62 E-value=4e-17 Score=138.18 Aligned_cols=146 Identities=10% Similarity=0.110 Sum_probs=126.6
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy13014 15 SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEA 94 (229)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 94 (229)
+...+++.+|.++... |++++|...|++++ ...|.++.++..+|.++..+|++++|+..|+++
T Consensus 4 ~~a~~~~~lg~~~~~~-g~~~~A~~~~~~Al----------------~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 66 (477)
T 1wao_1 4 KRAEELKTQANDYFKA-KDYENAIKFYSQAI----------------ELNPSNAIYYGNRSLAYLRTECYGYALGDATRA 66 (477)
T ss_dssp HHHTTSSSSSSSTTTT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHh-CCHHHHHHHHHHHH----------------HhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3445566677778888 99999999999988 567788999999999999999999999999999
Q ss_pred HHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHH--HHhcccHHHHHHHHH-
Q psy13014 95 LRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARL--YQQSDKLDEALADYQ- 171 (229)
Q Consensus 95 l~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~--~~~~~~~~~A~~~~~- 171 (229)
++++|.+ +.++.++|.+ +..+|++++|+..|+++++++|++..++..++.+ +...|++++|++.++
T Consensus 67 l~l~p~~-----~~~~~~lg~~------~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~ 135 (477)
T 1wao_1 67 IELDKKY-----IKGYYRRAAS------NMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEH 135 (477)
T ss_dssp HHSCTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------
T ss_pred HHhCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999 9999999999 9999999999999999999999999999999998 889999999999999
Q ss_pred ----------HHHHhCCCcHHHHHHhc
Q psy13014 172 ----------KILELDPNNRDAYVATK 188 (229)
Q Consensus 172 ----------~al~~~p~~~~~~~~l~ 188 (229)
+++.++|+....+...+
T Consensus 136 ~~~~~~~~~~~al~~~~~~~~~~~~~~ 162 (477)
T 1wao_1 136 KRSVVDSLDIESMTIEDEYSGPKLEDG 162 (477)
T ss_dssp CCSTTTCCTTSSCCCCTTCCSCCCGGG
T ss_pred cchhHhhhhhhhccccccccccccccc
Confidence 88888888766655554
No 150
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.61 E-value=7.7e-15 Score=116.21 Aligned_cols=178 Identities=9% Similarity=-0.011 Sum_probs=138.2
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy13014 14 PSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNE 93 (229)
Q Consensus 14 p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 93 (229)
|+....+...+..+... |++++|...+.+.+...+ ...........++.+|..+...|++++|+.++++
T Consensus 72 ~~~~~~l~~~~~~~~~~-~~y~~A~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 140 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQ-KRYKEIYNKVWNELKKEE----------YHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKK 140 (293)
T ss_dssp HHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTCC----------CCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHh-hhHHHHHHHHHHHhcccc----------CChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 34444555667777777 889988888876652111 0112234455667899999999999999999999
Q ss_pred HHHhCCCCCch-hhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHH---hcCCCcH----HHHHHHHHHHHhcccHHH
Q psy13014 94 ALRSCPRSCSV-SRAVFYANRSAALEKLASYLSLEKPDQSILACSKAI---TLNPSYL----KVYQRRARLYQQSDKLDE 165 (229)
Q Consensus 94 al~~~p~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al---~~~p~~~----~~~~~la~~~~~~~~~~~ 165 (229)
++...+...+. ....++.++|.+ |...|++++|+.+|++++ +..|++. .+++++|.++..+|++++
T Consensus 141 al~~~~~~~~~~~~~~~~~~lg~~------y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~ 214 (293)
T 2qfc_A 141 LLNQQLTGIDVYQNLYIENAIANI------YAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEE 214 (293)
T ss_dssp HHTTCCCSSCTTHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhcCCchHHHHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHH
Confidence 99886654322 246689999999 999999999999999999 4456543 689999999999999999
Q ss_pred HHHHHHHHHHhCCC------cHHHHHHhccCchHHHhhhhhc-cccccccc
Q psy13014 166 ALADYQKILELDPN------NRDAYVATKVSPDLKLKEKNGA-TKLSPDVF 209 (229)
Q Consensus 166 A~~~~~~al~~~p~------~~~~~~~l~~~~~~~~~~~~~a-~~~~~~~~ 209 (229)
|+.++++++++.+. ...++.++|.++ .++++..+| ...+.+++
T Consensus 215 Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y-~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 215 SLYQVNKAIEISCRINSMALIGQLYYQRGECL-RKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH-HHcCCcHHHHHHHHHHHH
Confidence 99999999988643 267889999998 888888888 56577665
No 151
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.61 E-value=1.8e-15 Score=129.37 Aligned_cols=181 Identities=6% Similarity=-0.020 Sum_probs=150.7
Q ss_pred cchhhcc-cCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH-HHHHHHHHHHHHHcc
Q psy13014 5 PYQQELS-KNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQT-AISLKDEGNALFRLN 82 (229)
Q Consensus 5 ~~~~~l~-~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 82 (229)
.|+++++ .+|++...++.+|.++... |++++|...|++++ ...|.+ ..+|...|..+...|
T Consensus 308 ~~~~Al~~~~p~~~~l~~~~~~~~~~~-g~~~~A~~~~~~al----------------~~~p~~~~~~~~~~~~~~~~~~ 370 (530)
T 2ooe_A 308 IYERAISTLLKKNMLLYFAYADYEESR-MKYEKVHSIYNRLL----------------AIEDIDPTLVYIQYMKFARRAE 370 (530)
T ss_dssp HHHHHTTTTCSSCHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HSSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHhc-CCHHHHHHHHHHHh----------------CccccCchHHHHHHHHHHHHhc
Confidence 4778897 8999999999999999999 99999999999988 334443 358999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhccc
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDK 162 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~ 162 (229)
++++|...|++++...|.. ...+...+.+. +...|++++|...|+++++..|+++.+|..++.++...|+
T Consensus 371 ~~~~A~~~~~~Al~~~~~~-----~~~~~~~a~~~-----~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~ 440 (530)
T 2ooe_A 371 GIKSGRMIFKKAREDARTR-----HHVYVTAALME-----YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNE 440 (530)
T ss_dssp HHHHHHHHHHHHHTCTTCC-----THHHHHHHHHH-----HHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHHHhccCCc-----hHHHHHHHHHH-----HHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCC
Confidence 9999999999999998876 66666555440 3468999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcHH----HHHHhccCchHHHhhhhhccccccccc-ccCC
Q psy13014 163 LDEALADYQKILELDPNNRD----AYVATKVSPDLKLKEKNGATKLSPDVF-LHPG 213 (229)
Q Consensus 163 ~~~A~~~~~~al~~~p~~~~----~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~ 213 (229)
+++|...|++++...|.++. +|....... ...|+...+.+.+.++. ..|+
T Consensus 441 ~~~Ar~~~~~al~~~~~~~~~~~~lw~~~~~~e-~~~G~~~~~~~~~~r~~~~~p~ 495 (530)
T 2ooe_A 441 DNNTRVLFERVLTSGSLPPEKSGEIWARFLAFE-SNIGDLASILKVEKRRFTAFRE 495 (530)
T ss_dssp HHHHHHHHHHHHHSCCSCGGGCHHHHHHHHHHH-HHSSCHHHHHHHHHHHHHHTHH
T ss_pred HhhHHHHHHHHHhccCCCHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHCch
Confidence 99999999999999876654 776666554 55677666666666666 5553
No 152
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.4e-14 Score=102.11 Aligned_cols=126 Identities=12% Similarity=0.122 Sum_probs=113.8
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHH---HHHHHHHHHHHHHHcc
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQ---TAISLKDEGNALFRLN 82 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~ 82 (229)
-.+....+|++...++.+|..+... |++++|...|++++ ...|. ...++..+|.++...|
T Consensus 17 ~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~a~----------------~~~~~~~~~~~~~~~~a~~~~~~~ 79 (148)
T 2dba_A 17 EPRPATPGASSVEQLRKEGNELFKC-GDYGGALAAYTQAL----------------GLDATPQDQAVLHRNRAACHLKLE 79 (148)
T ss_dssp CCCCCCTTCCCHHHHHHHHHHHHTT-TCHHHHHHHHHHHH----------------TSCCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCcCCccchHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHH----------------HHcccchHHHHHHHHHHHHHHHHc
Confidence 3456678899999999999999999 99999999999887 33343 3889999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQ 159 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~ 159 (229)
++++|+..+++++..+|.+ +.++..+|.+ +..+|++++|+.++++++.++|++..++..++.+...
T Consensus 80 ~~~~A~~~~~~~~~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 80 DYDKAETEASKAIEKDGGD-----VKALYRRSQA------LEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp CHHHHHHHHHHHHHHTSCC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred cHHHHHHHHHHHHhhCccC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 9999999999999999998 9999999999 9999999999999999999999999999888877543
No 153
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.60 E-value=8e-15 Score=117.65 Aligned_cols=179 Identities=15% Similarity=0.101 Sum_probs=147.5
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhh--hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSE--IRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~--~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
+..++..+|.+..++..+++++..+ +. ++++...+++.+ ..+|.+..+|...+.+....|.
T Consensus 97 ~~~~L~~~PKny~aW~hR~wlL~~l-~~~~~~~EL~~~~k~l----------------~~dprNy~AW~~R~~vl~~l~~ 159 (331)
T 3dss_A 97 LESCLRVNPKSYGTWHHRCWLLSRL-PEPNWARELELCARFL----------------EADERNFHCWDYRRFVAAQAAV 159 (331)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHC-SSCCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCHHHHHHHHHHHhcc-CcccHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHhCc
Confidence 4668889999999999999999988 84 788888888887 6889999999999999999998
Q ss_pred -HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhcc--------------CChHHHHHHHHHHHhcCCCcHH
Q psy13014 84 -WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSL--------------EKPDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 84 -~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~--------------~~~~~A~~~~~~al~~~p~~~~ 148 (229)
++++++++.+++..+|.+ ..+|.+++.+ +..+ +.++++++++.+++..+|++..
T Consensus 160 ~~~eel~~~~~~I~~~p~N-----~SAW~~R~~l------l~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~S 228 (331)
T 3dss_A 160 APAEELAFTDSLITRNFSN-----YSSWHYRSCL------LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQS 228 (331)
T ss_dssp CHHHHHHHHHHHHHHCSCC-----HHHHHHHHHH------HHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred CHHHHHHHHHHHHHHCCCC-----HHHHHHHHHH------HHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHH
Confidence 699999999999999999 9999999999 6655 4589999999999999999999
Q ss_pred HHHHHHHHHHhc-----------ccHHHHHHHHHHHHHhCCCcHHHHHHhccCch--HHHhhhhhccccccccc-ccC
Q psy13014 149 VYQRRARLYQQS-----------DKLDEALADYQKILELDPNNRDAYVATKVSPD--LKLKEKNGATKLSPDVF-LHP 212 (229)
Q Consensus 149 ~~~~la~~~~~~-----------~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~--~~~~~~~~a~~~~~~~~-~~p 212 (229)
+|+.+..++... +.++++++.+.++++++|++.-.+..++.+.. ...+...+....+.+.. +||
T Consensus 229 aW~Y~r~ll~~~~~~~~~~~~~~~~l~~el~~~~elle~~pd~~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Dp 306 (331)
T 3dss_A 229 AWFYHRWLLGAGSGRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDP 306 (331)
T ss_dssp HHHHHHHHHHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHhhCcccchHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCc
Confidence 998766666555 57999999999999999998655444443321 11122345555666666 777
No 154
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.60 E-value=4.9e-15 Score=127.72 Aligned_cols=156 Identities=13% Similarity=0.101 Sum_probs=141.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC----------HHHHHHHHHHHHHhCCCCCch
Q psy13014 35 RTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ----------WSESLAKYNEALRSCPRSCSV 104 (229)
Q Consensus 35 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~ 104 (229)
++|...+++++ ...|+...+|...+.++...++ +++++..+++++..+|.+
T Consensus 46 eeal~~~~~~l----------------~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~--- 106 (567)
T 1dce_A 46 ESVLELTSQIL----------------GANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS--- 106 (567)
T ss_dssp HHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC---
T ss_pred HHHHHHHHHHH----------------HHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC---
Confidence 35566666666 6789999999999999999998 999999999999999999
Q ss_pred hhHHHHHhHhhhhhhhHHhhccC--ChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHhCCCcH
Q psy13014 105 SRAVFYANRSAALEKLASYLSLE--KPDQSILACSKAITLNPSYLKVYQRRARLYQQSD-KLDEALADYQKILELDPNNR 181 (229)
Q Consensus 105 ~~~~~~~~lg~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~-~~~~A~~~~~~al~~~p~~~ 181 (229)
..+|.+++.+ +..++ ++++++++++++++++|.+..+|..++.+....| .++++++++.++++.+|++.
T Consensus 107 --y~aW~hR~w~------l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 107 --YGTWHHRCWL------LSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (567)
T ss_dssp --HHHHHHHHHH------HHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred --HHHHHHHHHH------HHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc
Confidence 9999999999 99999 6699999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHhccCchHHH--------------hhhhhccccccccc-ccCCCcccc
Q psy13014 182 DAYVATKVSPDLKL--------------KEKNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 182 ~~~~~l~~~~~~~~--------------~~~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
.+|..++.++ .++ +.+.++++.+.+++ ++|++...+
T Consensus 179 saW~~r~~ll-~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW 229 (567)
T 1dce_A 179 SSWHYRSCLL-PQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAW 229 (567)
T ss_dssp HHHHHHHHHH-HHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHH
T ss_pred cHHHHHHHHH-HhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHH
Confidence 9999999987 554 56889999999999 999775543
No 155
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.60 E-value=4.6e-14 Score=95.30 Aligned_cols=115 Identities=6% Similarity=0.049 Sum_probs=106.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy13014 16 FLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEAL 95 (229)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 95 (229)
.+..++.+|.++... |++++|...+++++ ...|.++.++..+|.++...|++++|+..+++++
T Consensus 3 ~~~~~~~~~~~~~~~-~~~~~A~~~~~~~~----------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 65 (118)
T 1elw_A 3 QVNELKEKGNKALSV-GNIDDALQCYSEAI----------------KLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTV 65 (118)
T ss_dssp HHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHc-ccHHHHHHHHHHHH----------------HHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 467889999999999 99999999999887 4567778899999999999999999999999999
Q ss_pred HhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Q psy13014 96 RSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQ 158 (229)
Q Consensus 96 ~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 158 (229)
..+|.+ +.++..+|.+ +...|++++|+..++++++.+|+++.++..++.+..
T Consensus 66 ~~~~~~-----~~~~~~~a~~------~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 66 DLKPDW-----GKGYSRKAAA------LEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HhCccc-----HHHHHHHHHH------HHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 999998 9999999999 999999999999999999999999999999887753
No 156
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.60 E-value=1.1e-14 Score=116.12 Aligned_cols=167 Identities=16% Similarity=0.120 Sum_probs=145.2
Q ss_pred HHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHhCCCCCc
Q psy13014 27 LFILFSEI-RTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLN--QWSESLAKYNEALRSCPRSCS 103 (229)
Q Consensus 27 ~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~al~~~p~~~~ 103 (229)
.... |.+ ++|...+++++ ...|+...+|...|.++...+ .+++++..++.++..+|.+
T Consensus 42 ~~~~-~e~s~~aL~~t~~~L----------------~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~-- 102 (306)
T 3dra_A 42 LMKA-EEYSERALHITELGI----------------NELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKN-- 102 (306)
T ss_dssp HHHT-TCCSHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTC--
T ss_pred HHHc-CCCCHHHHHHHHHHH----------------HHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCccc--
Confidence 3444 444 56777777776 688999999999999999999 9999999999999999999
Q ss_pred hhhHHHHHhHhhhhhhhHHhhcc---CChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHH--HHHHHHHHHHHhCC
Q psy13014 104 VSRAVFYANRSAALEKLASYLSL---EKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLD--EALADYQKILELDP 178 (229)
Q Consensus 104 ~~~~~~~~~lg~~~~~~~~~~~~---~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~--~A~~~~~~al~~~p 178 (229)
..+|..++.++..+. ..+ +++++++.+++++++.+|.+..+|..++.+...+|.++ ++++.+.++++.+|
T Consensus 103 ---y~aW~~R~~iL~~~~--~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~ 177 (306)
T 3dra_A 103 ---YQIWNYRQLIIGQIM--ELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDL 177 (306)
T ss_dssp ---CHHHHHHHHHHHHHH--HHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCT
T ss_pred ---HHHHHHHHHHHHHHH--HhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCC
Confidence 999999999921111 555 78999999999999999999999999999999999998 99999999999999
Q ss_pred CcHHHHHHhccCchHHHhh------hhhccccccccc-ccCCCcccc
Q psy13014 179 NNRDAYVATKVSPDLKLKE------KNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 179 ~~~~~~~~l~~~~~~~~~~------~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
.+..+|...+.+. ..++. +.++++.+.+++ .+|+|...+
T Consensus 178 ~N~sAW~~R~~ll-~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW 223 (306)
T 3dra_A 178 KNNSAWSHRFFLL-FSKKHLATDNTIDEELNYVKDKIVKCPQNPSTW 223 (306)
T ss_dssp TCHHHHHHHHHHH-HSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHH
T ss_pred CCHHHHHHHHHHH-HhccccchhhhHHHHHHHHHHHHHhCCCCccHH
Confidence 9999999999887 55555 888999999999 999776554
No 157
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.59 E-value=9.8e-15 Score=117.73 Aligned_cols=180 Identities=13% Similarity=0.036 Sum_probs=155.7
Q ss_pred cccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHcc-CHHHHH
Q psy13014 10 LSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLN-QWSESL 88 (229)
Q Consensus 10 l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~ 88 (229)
+...|++..++-....++... +..++|...+++++ ...|++..+|...+.++...+ .+++++
T Consensus 47 i~y~~~y~~~~~~~r~~~~~~-e~se~AL~lt~~~L----------------~~nP~~ytaWn~R~~iL~~l~~~l~eEL 109 (349)
T 3q7a_A 47 IMYSEEYKDAMDYFRAIAAKE-EKSERALELTEIIV----------------RMNPAHYTVWQYRFSLLTSLNKSLEDEL 109 (349)
T ss_dssp BCCCHHHHHHHHHHHHHHHTT-CCSHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred eeeCHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH----------------HhCchhHHHHHHHHHHHHHhhhhHHHHH
Confidence 345566666666655555555 55667888887777 688999999999999999999 599999
Q ss_pred HHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhcc-C-ChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHH--
Q psy13014 89 AKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSL-E-KPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLD-- 164 (229)
Q Consensus 89 ~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~-~-~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~-- 164 (229)
..+++++..+|.+ ..+|..++.+ +..+ + ++++++++++++++.+|.+..+|..++.+....|.++
T Consensus 110 ~~~~~~L~~nPKn-----y~aW~hR~wl------L~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~ 178 (349)
T 3q7a_A 110 RLMNEFAVQNLKS-----YQVWHHRLLL------LDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRI 178 (349)
T ss_dssp HHHHHHHHTTCCC-----HHHHHHHHHH------HHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCc-----HHHHHHHHHH------HHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccccc
Confidence 9999999999999 9999999999 8877 7 8999999999999999999999999999999999988
Q ss_pred ------HHHHHHHHHHHhCCCcHHHHHHhccCchHHHhh-------hhhccccccccc-ccCCCcccc
Q psy13014 165 ------EALADYQKILELDPNNRDAYVATKVSPDLKLKE-------KNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 165 ------~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~-------~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
++++.++++++.+|.|..+|..++.+. .+++. +.++++...+++ ++|+|...+
T Consensus 179 ~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL-~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW 245 (349)
T 3q7a_A 179 SEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLR-VSRPGAETSSRSLQDELIYILKSIHLIPHNVSAW 245 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-TTSTTCCCCHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred chhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HhccccccchHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999887 55543 678899999998 999776544
No 158
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.58 E-value=1e-13 Score=113.57 Aligned_cols=141 Identities=11% Similarity=0.097 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy13014 17 LYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALR 96 (229)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 96 (229)
...+..+|..++.. |++++|...|++++...................+..+.++.++|.++..+|++++|+.++++++.
T Consensus 223 a~~~~~~g~~~~~~-g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 223 SEDLKNIGNTFFKS-QNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 45688889999999 99999999999998654432111111112236678899999999999999999999999999999
Q ss_pred hCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHH
Q psy13014 97 SCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALAD 169 (229)
Q Consensus 97 ~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~ 169 (229)
++|.+ +.+++++|.+ +..+|++++|+.+|+++++++|++..++..++.++..+++++++...
T Consensus 302 ~~p~~-----~~a~~~lg~~------~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 302 IDPSN-----TKALYRRAQG------WQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp TCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hCchh-----HHHHHHHHHH------HHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 9999999999 99999999999999999999999999999999999999999887654
No 159
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.58 E-value=5.1e-15 Score=117.27 Aligned_cols=169 Identities=9% Similarity=0.020 Sum_probs=131.1
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCC
Q psy13014 23 SCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSC 102 (229)
Q Consensus 23 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~ 102 (229)
.+..+... |++++|...+++.+.... ...........+..+|..+...+++++|+.+|++++...+...
T Consensus 81 ~i~~~~~~-~~y~~a~~~~~~~l~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~ 149 (293)
T 3u3w_A 81 QVIMLCKQ-KRYKEIYNKVWNELKKEE----------YHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI 149 (293)
T ss_dssp HHHHHHHT-TCHHHHHHHHHHHHTTCC----------CCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCS
T ss_pred HHHHHHHH-hhHHHHHHHHHHHhcccc----------CChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccc
Confidence 35566677 888888888877662100 0001112234555689999999999999999999999765542
Q ss_pred ch-hhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-------CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy13014 103 SV-SRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL-------NPSYLKVYQRRARLYQQSDKLDEALADYQKIL 174 (229)
Q Consensus 103 ~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~-------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al 174 (229)
+. ....++.++|.+ |..+|++++|+.+|+++++. .+....+++++|.++..+|++++|+.++++++
T Consensus 150 ~~~~~~~~~~~lg~~------y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al 223 (293)
T 3u3w_A 150 DVYQNLYIENAIANI------YAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp CTTHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 22 235579999999 99999999999999999952 23335689999999999999999999999999
Q ss_pred HhCCCc------HHHHHHhccCchHHHhh-hhhccccccccc
Q psy13014 175 ELDPNN------RDAYVATKVSPDLKLKE-KNGATKLSPDVF 209 (229)
Q Consensus 175 ~~~p~~------~~~~~~l~~~~~~~~~~-~~~a~~~~~~~~ 209 (229)
++.+.. ..++.++|.++ .++++ +.+|++.+.+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~lg~~~-~~~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 224 EISCRINSMALIGQLYYQRGECL-RKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp HHHHHTTBCTTHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHH-HHhCCcHHHHHHHHHHHH
Confidence 886544 78999999999 78884 689999988887
No 160
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.58 E-value=3.2e-16 Score=122.69 Aligned_cols=172 Identities=10% Similarity=-0.063 Sum_probs=97.7
Q ss_pred cchhhcccCCchHHHHHHH-------HHHHHHhhhhhhhhHHHHHHHHHHHH----------------------------
Q psy13014 5 PYQQELSKNPSFLYTIYFS-------CFILFILFSEIRTDCHQFERQVFYIQ---------------------------- 49 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~-------~~~~~~~~~~~~~a~~~~~~~~~~~~---------------------------- 49 (229)
.|.+++..+|+...+|..+ +.++... ++..+++..+.+.+..-+
T Consensus 28 ~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~-~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v~~r~dl~L 106 (282)
T 4f3v_A 28 LFTEITNYDESACDAWIGRIRCGDTDRVTLFRA-WYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITM 106 (282)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHH-HHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEECSSHHHHHH
T ss_pred HHHHHHHhChhhhHHHHhHHHccCCcHHHHHHH-HHHHHHHHHHHHHhcCChhhhhhhhccCCcccccccccCCHhHHHH
Confidence 4889999999999999999 8899988 888888887766553000
Q ss_pred ----------HHHHHHHhh-hhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhh
Q psy13014 50 ----------FIFHVLFYL-FCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALE 118 (229)
Q Consensus 50 ----------~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~ 118 (229)
........+ ......|... ..+.+|.++++.++|++|+..|+.++...+.. ....+++++|.+
T Consensus 107 ayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~---~~~~a~~~LG~a-- 180 (282)
T 4f3v_A 107 GFAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKF---LAGAAGVAHGVA-- 180 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHH---HHHHHHHHHHHH--
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcc---cHHHHHHHHHHH--
Confidence 000000011 1112234444 55556666666666666666655444331110 012355555666
Q ss_pred hhHHhhccCChHHHHHHHHHHHhcC--CC-cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhc
Q psy13014 119 KLASYLSLEKPDQSILACSKAITLN--PS-YLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATK 188 (229)
Q Consensus 119 ~~~~~~~~~~~~~A~~~~~~al~~~--p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 188 (229)
+..+|++++|+.+|++++... |. .+.+++++|.++..+|+.++|...|++++..+|+ ..+...|.
T Consensus 181 ----l~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 181 ----AANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp ----HHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred ----HHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 556666666666666655432 33 3445566666666666666666666666666665 55544443
No 161
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.57 E-value=2.9e-14 Score=113.74 Aligned_cols=158 Identities=13% Similarity=0.080 Sum_probs=127.1
Q ss_pred chhhcccCCc------hHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q psy13014 6 YQQELSKNPS------FLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALF 79 (229)
Q Consensus 6 ~~~~l~~~p~------~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 79 (229)
|.+++++.+. -..++..+|.++... |++++|+.+|++++.... ........+.++..+|.++.
T Consensus 59 ~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~-g~~~~A~~~~~~Al~l~~----------~~g~~~~~a~~~~~lg~~~~ 127 (307)
T 2ifu_A 59 YLQEAEAHANNRSLFHAAKAFEQAGMMLKDL-QRMPEAVQYIEKASVMYV----------ENGTPDTAAMALDRAGKLME 127 (307)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCGGGGHHHHHHHHHHHH----------TTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHH----------HcCCHHHHHHHHHHHHHHHH
Confidence 4555555432 245778889999999 999999999999884322 11123355788999999999
Q ss_pred HccCHHHHHHHHHHHHHhCCCCCch-hhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc------HHHHHH
Q psy13014 80 RLNQWSESLAKYNEALRSCPRSCSV-SRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY------LKVYQR 152 (229)
Q Consensus 80 ~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~ 152 (229)
. |++++|+.+|++++.+.|..... ....++.++|.+ +..+|++++|+.+|++++.+.|.+ ..++..
T Consensus 128 ~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 200 (307)
T 2ifu_A 128 P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRL------LVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIA 200 (307)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHH
Confidence 9 99999999999999998754322 246789999999 999999999999999999986543 347888
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhCCCcHH
Q psy13014 153 RARLYQQSDKLDEALADYQKILELDPNNRD 182 (229)
Q Consensus 153 la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 182 (229)
+|.++..+|++++|+..|++++ ++|....
T Consensus 201 ~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 201 QVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 9999999999999999999999 9997654
No 162
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.55 E-value=3e-13 Score=96.11 Aligned_cols=146 Identities=14% Similarity=0.106 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy13014 17 LYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALR 96 (229)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 96 (229)
..++..+|.++... |++++|...+++++...+. .........++..+|.++...|++++|+.++++++.
T Consensus 9 ~~~~~~l~~~~~~~-~~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 77 (164)
T 3ro3_A 9 GRAFGNLGNTHYLL-GNFRDAVIAHEQRLLIAKE----------FGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLL 77 (164)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHH----------HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHH----------hCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45788899999999 9999999999988754331 123345567899999999999999999999999999
Q ss_pred hCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCC------CcHHHHHHHHHHHHhcccHHHHHHH
Q psy13014 97 SCPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNP------SYLKVYQRRARLYQQSDKLDEALAD 169 (229)
Q Consensus 97 ~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~la~~~~~~~~~~~A~~~ 169 (229)
+.+.... .....++.++|.+ +...|++++|+.++++++.+.+ ....++..+|.++...|++++|+..
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 151 (164)
T 3ro3_A 78 LARQLKDRAVEAQSCYSLGNT------YTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHF 151 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHhCCcHHHHHHHHHHHHH------HHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHH
Confidence 8654322 2246789999999 9999999999999999997732 2256789999999999999999999
Q ss_pred HHHHHHhCCC
Q psy13014 170 YQKILELDPN 179 (229)
Q Consensus 170 ~~~al~~~p~ 179 (229)
+++++++...
T Consensus 152 ~~~a~~~~~~ 161 (164)
T 3ro3_A 152 AEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 9999987654
No 163
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.54 E-value=4.7e-14 Score=96.41 Aligned_cols=95 Identities=11% Similarity=0.107 Sum_probs=85.7
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhh---HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHH
Q psy13014 32 SEIRTDCHQFERQVFYIQFIFHVLFYLFCSQK---LEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAV 108 (229)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~ 108 (229)
|++++|+..|++++ .. .|..+.+++.+|.++...|++++|+..|+++++.+|++ +.
T Consensus 4 g~~~~A~~~~~~al----------------~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-----~~ 62 (117)
T 3k9i_A 4 GLEAQAVPYYEKAI----------------ASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH-----QA 62 (117)
T ss_dssp ---CCCHHHHHHHH----------------SSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HH
T ss_pred CcHHHHHHHHHHHH----------------HcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----hH
Confidence 88999999999988 44 68999999999999999999999999999999999999 99
Q ss_pred HHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHH
Q psy13014 109 FYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRR 153 (229)
Q Consensus 109 ~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 153 (229)
++.++|.+ +..+|++++|+..+++++...|+++......
T Consensus 63 ~~~~l~~~------~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 63 LRVFYAMV------LYNLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp HHHHHHHH------HHHHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred HHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 99999999 9999999999999999999999998765433
No 164
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.53 E-value=3.4e-14 Score=95.12 Aligned_cols=108 Identities=15% Similarity=0.154 Sum_probs=100.3
Q ss_pred cCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHH
Q psy13014 12 KNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKY 91 (229)
Q Consensus 12 ~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~ 91 (229)
++|++..+++.+|.++... |++++|...+++++ ...|..+.++..+|.++...|++++|+..+
T Consensus 1 l~p~~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~----------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 63 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDA-GNYTESIDLFEKAI----------------QLDPEESKYWLMKGKALYNLERYEEAVDCY 63 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSS-CCHHHHHHHHHHHH----------------HHCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHh-hhHHHHHHHHHHHH----------------HhCcCCHHHHHHHHHHHHHccCHHHHHHHH
Confidence 4789999999999999999 99999999999887 455667789999999999999999999999
Q ss_pred HHHHHhCCC--CCchhhHHHHHhHhhhhhhhHHhhcc-CChHHHHHHHHHHHhcCCCcH
Q psy13014 92 NEALRSCPR--SCSVSRAVFYANRSAALEKLASYLSL-EKPDQSILACSKAITLNPSYL 147 (229)
Q Consensus 92 ~~al~~~p~--~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~A~~~~~~al~~~p~~~ 147 (229)
++++..+|. + ..++..+|.+ +..+ |++++|++++++++...|.++
T Consensus 64 ~~a~~~~~~~~~-----~~~~~~l~~~------~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 64 NYVINVIEDEYN-----KDVWAAKADA------LRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHTSCCTTC-----HHHHHHHHHH------HTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHhCcccch-----HHHHHHHHHH------HHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999999999 8 9999999999 9999 999999999999999998753
No 165
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.53 E-value=2.1e-14 Score=112.42 Aligned_cols=133 Identities=9% Similarity=-0.047 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc-
Q psy13014 68 AISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY- 146 (229)
Q Consensus 68 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~- 146 (229)
..+...++..+...|+|++|.+.|...+...|.+ . ..+.+|.+ +++.+++++|+..+++++...++.
T Consensus 102 ~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~-----~-~~~~~a~l------~~~~~r~~dA~~~l~~a~~~~d~~~ 169 (282)
T 4f3v_A 102 LAITMGFAACEAAQGNYADAMEALEAAPVAGSEH-----L-VAWMKAVV------YGAAERWTDVIDQVKSAGKWPDKFL 169 (282)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHH-----H-HHHHHHHH------HHHTTCHHHHHHHHTTGGGCSCHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCch-----H-HHHHHHHH------HHHcCCHHHHHHHHHHhhccCCccc
Confidence 3466778999999999999999999999988876 7 99999999 999999999999999988864332
Q ss_pred -HHHHHHHHHHHHhcccHHHHHHHHHHHHHhC--CC-cHHHHHHhccCchHHHhhhhhccccccccc-ccCC
Q psy13014 147 -LKVYQRRARLYQQSDKLDEALADYQKILELD--PN-NRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPG 213 (229)
Q Consensus 147 -~~~~~~la~~~~~~~~~~~A~~~~~~al~~~--p~-~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~ 213 (229)
..+++++|.++..+|++++|+.+|++++.-. |. ..++++.++.++ .++++..+|...|++++ .+|+
T Consensus 170 ~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL-~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 170 AGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMAR-RSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhcCCc
Confidence 4589999999999999999999999998654 55 667999999999 89999999999999999 8885
No 166
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.53 E-value=1.2e-14 Score=97.77 Aligned_cols=95 Identities=8% Similarity=0.012 Sum_probs=57.5
Q ss_pred HHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCc------
Q psy13014 107 AVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNN------ 180 (229)
Q Consensus 107 ~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~------ 180 (229)
+..+..+|.+ ++..|++++|+..|+++++++|+++.+++++|.++..+|++++|+..|+++++++|++
T Consensus 4 ~~~~~~~g~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 77 (111)
T 2l6j_A 4 FEKQKEQGNS------LFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIR 77 (111)
T ss_dssp HHHHHHHHHH------HHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHH
T ss_pred HHHHHHHHHH------HHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHH
Confidence 4555566666 6666666666666666666666666666666666666666666666666666666665
Q ss_pred HHHHHHhccCchHHHhhhhhcccccccc
Q psy13014 181 RDAYVATKVSPDLKLKEKNGATKLSPDV 208 (229)
Q Consensus 181 ~~~~~~l~~~~~~~~~~~~~a~~~~~~~ 208 (229)
..++..++.++ ..+++...++..+.+.
T Consensus 78 ~~~~~~~~~~~-~~~~~~~~a~~~~~~~ 104 (111)
T 2l6j_A 78 SKLQYRLELAQ-GAVGSVQIPVVEVDEL 104 (111)
T ss_dssp HHHHHHHHHHH-HHHHCCCCCSSSSSSC
T ss_pred HHHHHHHHHHH-HHHHhHhhhHhHHHHh
Confidence 55566666555 5555555555555543
No 167
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.52 E-value=1.1e-13 Score=109.46 Aligned_cols=154 Identities=11% Similarity=0.054 Sum_probs=118.2
Q ss_pred chhhcccCCchH------HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q psy13014 6 YQQELSKNPSFL------YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALF 79 (229)
Q Consensus 6 ~~~~l~~~p~~~------~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 79 (229)
|+++++..|... ..++.+|.++... |++++|...+++++.... ........+.++..+|.++.
T Consensus 98 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~~----------~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 2qfc_A 98 VWNELKKEEYHPEFQQFLQWQYYVAAYVLKK-VDYEYCILELKKLLNQQL----------TGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HHHHHHTCCCCHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHTTCC----------CSSCTTHHHHHHHHHHHHHH
T ss_pred HHHHhccccCChhHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHh----------cCCchHHHHHHHHHHHHHHH
Confidence 344555555432 3456677788777 899999999988872110 00122335678999999999
Q ss_pred HccCHHHHHHHHHHHHH---hCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC------cHHHH
Q psy13014 80 RLNQWSESLAKYNEALR---SCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS------YLKVY 150 (229)
Q Consensus 80 ~~~~~~~A~~~~~~al~---~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~ 150 (229)
..|++++|+.+|++++. ..|.+ ......++.++|.+ |..+|++++|+.++++++.+.+. ...++
T Consensus 167 ~~~~~~~A~~~~~kal~~~~~~~~~-~~~~~~~~~nlg~~------y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~ 239 (293)
T 2qfc_A 167 ENGYLKKGIDLFEQILKQLEALHDN-EEFDVKVRYNHAKA------LYLDSRYEESLYQVNKAIEISCRINSMALIGQLY 239 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCC-HHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcCcc-ccchHHHHHhHHHH------HHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 99999999999999994 45543 11123689999999 99999999999999999987542 27889
Q ss_pred HHHHHHHHhcccHHHH-HHHHHHHHHhC
Q psy13014 151 QRRARLYQQSDKLDEA-LADYQKILELD 177 (229)
Q Consensus 151 ~~la~~~~~~~~~~~A-~~~~~~al~~~ 177 (229)
+++|.++..+|++++| ..++++++.+.
T Consensus 240 ~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 240 YQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999 78899998764
No 168
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.52 E-value=3.2e-13 Score=100.25 Aligned_cols=150 Identities=11% Similarity=0.064 Sum_probs=122.8
Q ss_pred cCC-chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHH
Q psy13014 12 KNP-SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAK 90 (229)
Q Consensus 12 ~~p-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~ 90 (229)
.+| ....++..+|.++... |++++|...+++++.... .....+..+.++..+|.++...|++++|+.+
T Consensus 20 ~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~----------~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 88 (203)
T 3gw4_A 20 AHPATASGARFMLGYVYAFM-DRFDEARASFQALQQQAQ----------KSGDHTAEHRALHQVGMVERMAGNWDAARRC 88 (203)
T ss_dssp TSTTTHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH----------TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHH----------HcCCcHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 355 6778999999999999 999999999998874322 1125667888999999999999999999999
Q ss_pred HHHHHHhCCCCC-c-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCC--Cc----HHHHHHHHHHHHhccc
Q psy13014 91 YNEALRSCPRSC-S-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNP--SY----LKVYQRRARLYQQSDK 162 (229)
Q Consensus 91 ~~~al~~~p~~~-~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p--~~----~~~~~~la~~~~~~~~ 162 (229)
+++++.+..... . .....++.++|.+ +..+|++++|+.++++++.+.+ .+ ..++..+|.++...|+
T Consensus 89 ~~~al~~~~~~~~~~~~~~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 162 (203)
T 3gw4_A 89 FLEERELLASLPEDPLAASANAYEVATV------ALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKN 162 (203)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCccHHHHHHHHHHHHHH------HHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcC
Confidence 999999832211 1 1246789999999 9999999999999999997632 22 3457899999999999
Q ss_pred HHHHHHHHHHHHHhCC
Q psy13014 163 LDEALADYQKILELDP 178 (229)
Q Consensus 163 ~~~A~~~~~~al~~~p 178 (229)
+++|+..+++++++..
T Consensus 163 ~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 163 LLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998754
No 169
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.52 E-value=8.1e-14 Score=93.56 Aligned_cols=68 Identities=15% Similarity=0.227 Sum_probs=59.1
Q ss_pred cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCC
Q psy13014 146 YLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQ 214 (229)
Q Consensus 146 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~ 214 (229)
++.+++.+|.++...|++++|+..|+++++++|+++.++.++|.++ ..++++.+|+..+.+++ ++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMAL-IKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHhCCCc
Confidence 4667888899999999999999999999999999888899999888 78888888988888888 88876
No 170
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.52 E-value=8.2e-14 Score=110.27 Aligned_cols=155 Identities=12% Similarity=0.055 Sum_probs=118.3
Q ss_pred chhhcccCCchHH------HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Q psy13014 6 YQQELSKNPSFLY------TIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALF 79 (229)
Q Consensus 6 ~~~~l~~~p~~~~------~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 79 (229)
|+++++..|..+. .+..+|.++... +++++|..++++++... ...........++..+|.++.
T Consensus 98 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~Ai~~~~~al~~~----------~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 3u3w_A 98 VWNELKKEEYHPEFQQFLQWQYYVAAYVLKK-VDYEYCILELKKLLNQQ----------LTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHTTS-SCHHHHHHHHHHHHHTC----------CCCSCTTHHHHHHHHHHHHHH
T ss_pred HHHHhccccCChHHHHHHHHHHHHHHHHHcc-cCHHHHHHHHHHHHHHh----------cccccHHHHHHHHHHHHHHHH
Confidence 4455555554443 233467777766 89999999998887310 001122244668999999999
Q ss_pred HccCHHHHHHHHHHHHHhCCCC--CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc------HHHHH
Q psy13014 80 RLNQWSESLAKYNEALRSCPRS--CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY------LKVYQ 151 (229)
Q Consensus 80 ~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~ 151 (229)
..|++++|+.+|++++...... .......++.++|.+ |..+|++++|+.++++++++.+.. +.+++
T Consensus 167 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~------y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~ 240 (293)
T 3u3w_A 167 ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKA------LYLDSRYEESLYQVNKAIEISCRINSMALIGQLYY 240 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH------HHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 9999999999999999643211 223346789999999 999999999999999999886433 78999
Q ss_pred HHHHHHHhcc-cHHHHHHHHHHHHHhC
Q psy13014 152 RRARLYQQSD-KLDEALADYQKILELD 177 (229)
Q Consensus 152 ~la~~~~~~~-~~~~A~~~~~~al~~~ 177 (229)
++|.++..+| .+++|+..|++++.+.
T Consensus 241 ~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 241 QRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 9999999999 5799999999998763
No 171
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.51 E-value=5.8e-14 Score=100.30 Aligned_cols=89 Identities=21% Similarity=0.191 Sum_probs=80.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHhCCCC
Q psy13014 32 SEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW----------SESLAKYNEALRSCPRS 101 (229)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~al~~~p~~ 101 (229)
+.+++|...+++++ ...|.++.+|+++|.++...+++ ++|+..|+++++++|++
T Consensus 16 ~~feeA~~~~~~Ai----------------~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~ 79 (158)
T 1zu2_A 16 LLFEQIRQDAENTY----------------KSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK 79 (158)
T ss_dssp HHHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHHH----------------HHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc
Confidence 67788888888777 68899999999999999999875 59999999999999999
Q ss_pred CchhhHHHHHhHhhhhhhhHHhhcc-----------CChHHHHHHHHHHHhcCCCcH
Q psy13014 102 CSVSRAVFYANRSAALEKLASYLSL-----------EKPDQSILACSKAITLNPSYL 147 (229)
Q Consensus 102 ~~~~~~~~~~~lg~~~~~~~~~~~~-----------~~~~~A~~~~~~al~~~p~~~ 147 (229)
..+|+++|.+ |..+ |++++|+.+|++|++++|++.
T Consensus 80 -----~~A~~~LG~a------y~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 80 -----DEAVWCIGNA------YTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp -----HHHHHHHHHH------HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred -----HHHHHHHHHH------HHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 9999999999 7665 489999999999999999974
No 172
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.49 E-value=3.1e-14 Score=105.82 Aligned_cols=155 Identities=11% Similarity=-0.023 Sum_probs=123.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCC-chhhHHHH
Q psy13014 32 SEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSC-SVSRAVFY 110 (229)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~~~~ 110 (229)
|++++|...++... ......+.++..+|.++...|++++|+.++++++.+..... ......++
T Consensus 6 g~~~~A~~~~~~~~----------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 69 (203)
T 3gw4_A 6 HDYALAERQAQALL----------------AHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRAL 69 (203)
T ss_dssp -CHHHHHHHHHHHH----------------TSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ccHHHHHHHHHHhc----------------CChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 77777777443332 23336788999999999999999999999999999644322 22347889
Q ss_pred HhHhhhhhhhHHhhccCChHHHHHHHHHHHhc---CCC----cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC--cH
Q psy13014 111 ANRSAALEKLASYLSLEKPDQSILACSKAITL---NPS----YLKVYQRRARLYQQSDKLDEALADYQKILELDPN--NR 181 (229)
Q Consensus 111 ~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~---~p~----~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~--~~ 181 (229)
.++|.+ +...|++++|+.++++++.+ .++ ...++.++|.++...|++++|+..+++++.+.+. ++
T Consensus 70 ~~l~~~------~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 143 (203)
T 3gw4_A 70 HQVGMV------ERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQ 143 (203)
T ss_dssp HHHHHH------HHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHH------HHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccch
Confidence 999999 99999999999999999998 442 3567999999999999999999999999976432 22
Q ss_pred ----HHHHHhccCchHHHhhhhhccccccccc
Q psy13014 182 ----DAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 182 ----~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
.++..++.++ ...++..+|...+.+++
T Consensus 144 ~~~~~~~~~la~~~-~~~g~~~~A~~~~~~al 174 (203)
T 3gw4_A 144 VAIACAFRGLGDLA-QQEKNLLEAQQHWLRAR 174 (203)
T ss_dssp HHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHCcCHHHHHHHHHHHH
Confidence 2457888888 78888999988888776
No 173
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.48 E-value=3.1e-13 Score=91.82 Aligned_cols=95 Identities=12% Similarity=0.134 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHH
Q psy13014 86 ESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDE 165 (229)
Q Consensus 86 ~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~ 165 (229)
+|+..|++++..+|.+ +.+++.+|.+ +...|++++|+..|++++.++|+++.+++.+|.++...|++++
T Consensus 3 ~a~~~~~~al~~~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~ 71 (115)
T 2kat_A 3 AITERLEAMLAQGTDN-----MLLRFTLGKT------YAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAG 71 (115)
T ss_dssp CHHHHHHHHHTTTCCC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHhCCCc-----HHHHHHHHHH------HHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHH
Confidence 5789999999999999 9999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCc--HHHHHHhccCc
Q psy13014 166 ALADYQKILELDPNN--RDAYVATKVSP 191 (229)
Q Consensus 166 A~~~~~~al~~~p~~--~~~~~~l~~~~ 191 (229)
|+..|+++++++|.. ......+...+
T Consensus 72 A~~~~~~al~~~~~~~~~~~~~~l~~~l 99 (115)
T 2kat_A 72 ARQAWESGLAAAQSRGDQQVVKELQVFL 99 (115)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccHHHHHHHHHHH
Confidence 999999999998854 34444444443
No 174
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.47 E-value=5.5e-13 Score=91.58 Aligned_cols=125 Identities=10% Similarity=0.057 Sum_probs=107.6
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy13014 14 PSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNE 93 (229)
Q Consensus 14 p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 93 (229)
|+....++.+|.++... |++++|...|++++ ...|.++.++..+|.++...|++++|+.++++
T Consensus 1 ~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~a~----------------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 63 (131)
T 1elr_A 1 GKQALKEKELGNDAYKK-KDFDTALKHYDKAK----------------ELDPTNMTYITNQAAVYFEKGDYNKCRELCEK 63 (131)
T ss_dssp CHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHh-cCHHHHHHHHHHHH----------------hcCCccHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45678899999999999 99999999999887 45567788999999999999999999999999
Q ss_pred HHHhCCCCCc--hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhccc
Q psy13014 94 ALRSCPRSCS--VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDK 162 (229)
Q Consensus 94 al~~~p~~~~--~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~ 162 (229)
++...|.+.. .....++..+|.+ +...|++++|+.+++++++..| ++.....++.+...+++
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~la~~------~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 64 AIEVGRENREDYRQIAKAYARIGNS------YFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HHhhccccchhHHHHHHHHHHHHHH------HHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 9999875321 1126789999999 9999999999999999999999 68888888888776554
No 175
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.47 E-value=9.2e-14 Score=98.85 Aligned_cols=140 Identities=13% Similarity=0.142 Sum_probs=117.6
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
.....+.++..+|.++...|++++|+.++++++...+.... .....++..+|.+ +...|++++|+.++++++.
T Consensus 4 d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~------~~~~g~~~~A~~~~~~a~~ 77 (164)
T 3ro3_A 4 SRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNA------YIFLGEFETASEYYKKTLL 77 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH------HHHcCCHHHHHHHHHHHHH
Confidence 34567788999999999999999999999999998664322 2235689999999 9999999999999999998
Q ss_pred cCCCc------HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC------cHHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 142 LNPSY------LKVYQRRARLYQQSDKLDEALADYQKILELDPN------NRDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 142 ~~p~~------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
+.+.. ..++..+|.++...|++++|+..+++++++.+. ...++..++.++ ...++..+|.+.+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~ 156 (164)
T 3ro3_A 78 LARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAY-TALGNHDQAMHFAEKHL 156 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHH
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHH-HHccCHHHHHHHHHHHH
Confidence 75432 568999999999999999999999999987432 245778888888 88889999988888776
No 176
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.47 E-value=9.7e-13 Score=85.02 Aligned_cols=85 Identities=25% Similarity=0.337 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS 145 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 145 (229)
..+.+++.+|.++...|++++|+..|++++..+|.+ +.++.++|.+ +...|++++|+.++++++.++|+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-----~~~~~~l~~~------~~~~~~~~~A~~~~~~a~~~~p~ 75 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-----AEAWYNLGNA------YYKQGDYDEAIEYYQKALELDPN 75 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTT
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-----HHHHHHHHHH------HHHHhhHHHHHHHHHHHHhcCCC
Confidence 455667777777777777777777777777777776 7777777777 77777777777777777777777
Q ss_pred cHHHHHHHHHHHHhcc
Q psy13014 146 YLKVYQRRARLYQQSD 161 (229)
Q Consensus 146 ~~~~~~~la~~~~~~~ 161 (229)
++.++.++|.++...|
T Consensus 76 ~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 76 NAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcC
Confidence 7777777777766543
No 177
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.46 E-value=5.7e-13 Score=91.91 Aligned_cols=119 Identities=12% Similarity=0.039 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHH---HHHHHHHHHHHHccCHHHHHHHHHHH
Q psy13014 18 YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTA---ISLKDEGNALFRLNQWSESLAKYNEA 94 (229)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~~~A~~~~~~a 94 (229)
.+++.+|.++... |++++|...|++++ ...|.++ .+++.+|.++...|++++|+..|+++
T Consensus 3 ~~~~~~a~~~~~~-~~~~~A~~~~~~~~----------------~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~ 65 (129)
T 2xev_A 3 RTAYNVAFDALKN-GKYDDASQLFLSFL----------------ELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDL 65 (129)
T ss_dssp CCHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCHHHHHHHHHHHH----------------HHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3578889999999 99999999998887 3334333 79999999999999999999999999
Q ss_pred HHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Q psy13014 95 LRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSD 161 (229)
Q Consensus 95 l~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~ 161 (229)
+..+|++.. .+.+++.+|.+ +..+|++++|+..+++++...|+++.+...+..+..-.+
T Consensus 66 ~~~~p~~~~--~~~~~~~la~~------~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~ 124 (129)
T 2xev_A 66 VSRYPTHDK--AAGGLLKLGLS------QYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRL 124 (129)
T ss_dssp HHHCTTSTT--HHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC-
T ss_pred HHHCCCCcc--cHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHh
Confidence 999997622 25779999999 999999999999999999999999887666665544433
No 178
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.46 E-value=1.9e-13 Score=103.31 Aligned_cols=127 Identities=9% Similarity=-0.063 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccC----ChHHHHHHHHHHHh
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLE----KPDQSILACSKAIT 141 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~----~~~~A~~~~~~al~ 141 (229)
.++.+++.+|.++...+++++|+..|++++.. .+ +.+++++|.+ |.. + ++++|+.+|+++++
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~-----~~a~~~lg~~------y~~-~g~~~~~~~A~~~~~~A~~ 81 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GD-----GDALALLAQL------KIR-NPQQADYPQARQLAEKAVE 81 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TC-----HHHHHHHHHH------TTS-STTSCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CC-----HHHHHHHHHH------HHc-CCCCCCHHHHHHHHHHHHH
Confidence 67889999999999999999999999999886 45 8999999999 988 7 99999999999965
Q ss_pred cCCCcHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhCC--CcHHHHHHhccCchHH----Hhhhhhccccccccc
Q psy13014 142 LNPSYLKVYQRRARLYQQ----SDKLDEALADYQKILELDP--NNRDAYVATKVSPDLK----LKEKNGATKLSPDVF 209 (229)
Q Consensus 142 ~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p--~~~~~~~~l~~~~~~~----~~~~~~a~~~~~~~~ 209 (229)
+.++.+++++|.+|.. .+++++|+.+|+++++.+| .++.++.+++.++ .. .++..+|++.|.++.
T Consensus 82 --~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y-~~g~g~~~d~~~A~~~~~~A~ 156 (212)
T 3rjv_A 82 --AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIY-ASGVHGPEDDVKASEYFKGSS 156 (212)
T ss_dssp --TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHH-HHTSSSSCCHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHH-HcCCCCCCCHHHHHHHHHHHH
Confidence 6789999999999998 8999999999999999998 4589999999998 55 567899999999888
No 179
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.46 E-value=6e-13 Score=105.46 Aligned_cols=180 Identities=12% Similarity=0.046 Sum_probs=142.6
Q ss_pred chhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH--HHHHHHHHHHHHHHHccC
Q psy13014 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLE--QTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 6 ~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~ 83 (229)
|++.++..+....+++.+|.++... |++++|...+.+.+ ...+ ....+....+.++..+|+
T Consensus 89 l~~l~~~~~~~~~~~~~la~i~~~~-g~~eeAL~~l~~~i----------------~~~~~~~~lea~~l~vqi~L~~~r 151 (310)
T 3mv2_B 89 LENLLKDKQNSPYELYLLATAQAIL-GDLDKSLETCVEGI----------------DNDEAEGTTELLLLAIEVALLNNN 151 (310)
T ss_dssp HHHTTTTSCCCHHHHHHHHHHHHHH-TCHHHHHHHHHHHH----------------TSSCSTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCCCcHHHHHHHHHHHHc-CCHHHHHHHHHHHh----------------ccCCCcCcHHHHHHHHHHHHHCCC
Confidence 4556666566677788999999999 99999999998876 3333 788899999999999999
Q ss_pred HHHHHHHHHHHHHhCCC-----CCchhhHHHHHhHhhhhhhhHHhhccC--ChHHHHHHHHHHHhcCCC--cHHHHHHHH
Q psy13014 84 WSESLAKYNEALRSCPR-----SCSVSRAVFYANRSAALEKLASYLSLE--KPDQSILACSKAITLNPS--YLKVYQRRA 154 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~-----~~~~~~~~~~~~lg~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p~--~~~~~~~la 154 (229)
.+.|.+.+++..+.+|+ + .......-|.+ .+..| ++.+|...|+++....|+ .+..+++
T Consensus 152 ~d~A~k~l~~~~~~~~d~~~~~d----~~l~~Laea~v------~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln-- 219 (310)
T 3mv2_B 152 VSTASTIFDNYTNAIEDTVSGDN----EMILNLAESYI------KFATNKETATSNFYYYEELSQTFPTWKTQLGLLN-- 219 (310)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHH----HHHHHHHHHHH------HHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH--
T ss_pred HHHHHHHHHHHHhcCccccccch----HHHHHHHHHHH------HHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH--
Confidence 99999999999999882 2 13333334555 44445 999999999999988887 3334444
Q ss_pred HHHHhcccHHHHHHHHHHHHHh----------CCCcHHHHHHhccCchHHHhhhhhccccccccc-ccCCCcccc
Q psy13014 155 RLYQQSDKLDEALADYQKILEL----------DPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQIQ 218 (229)
Q Consensus 155 ~~~~~~~~~~~A~~~~~~al~~----------~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~~ 218 (229)
++..+|++++|...++.+++. +|+++.++.++..+. ..+++ ++.+.+.++. .+|+++-+.
T Consensus 220 -~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~-~~lgk--~a~~l~~qL~~~~P~hp~i~ 290 (310)
T 3mv2_B 220 -LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLA-LMQGL--DTEDLTNQLVKLDHEHAFIK 290 (310)
T ss_dssp -HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHH-HHTTC--TTHHHHHHHHHTTCCCHHHH
T ss_pred -HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHH-HHhCh--HHHHHHHHHHHhCCCChHHH
Confidence 899999999999999988877 588999998887776 55565 7788888888 888776543
No 180
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.44 E-value=1.5e-12 Score=110.17 Aligned_cols=129 Identities=12% Similarity=-0.057 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHc-----cCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccC---ChHHHHHHHH
Q psy13014 66 QTAISLKDEGNALFRL-----NQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLE---KPDQSILACS 137 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~-----~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~A~~~~~ 137 (229)
.++.+++.+|.++... +++++|+..|+++++.. + +.+++++|.+ +...| ++++|+.+|+
T Consensus 289 ~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~--~-----~~a~~~lg~~------y~~~g~~~~~~~A~~~~~ 355 (490)
T 2xm6_A 289 GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQG--D-----ATAQANLGAI------YFRLGSEEEHKKAVEWFR 355 (490)
T ss_dssp TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTT--C-----HHHHHHHHHH------HHHSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcC--C-----HHHHHHHHHH------HHhCCCcccHHHHHHHHH
Confidence 3556788899999887 89999999999998863 4 7889999999 87766 8899999999
Q ss_pred HHHhcCCCcHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHH----Hhhhhhccccccccc
Q psy13014 138 KAITLNPSYLKVYQRRARLYQQ----SDKLDEALADYQKILELDPNNRDAYVATKVSPDLK----LKEKNGATKLSPDVF 209 (229)
Q Consensus 138 ~al~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~----~~~~~~a~~~~~~~~ 209 (229)
++++. .++.+++++|.++.. .+++++|+.+|+++++.. ++.++.+++.++ .. .++..+|...|.+++
T Consensus 356 ~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y-~~g~g~~~d~~~A~~~~~~A~ 430 (490)
T 2xm6_A 356 KAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIY-YYGLGVERDYVQAWAWFDTAS 430 (490)
T ss_dssp HHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH-HHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHH-HcCCCCCCCHHHHHHHHHHHH
Confidence 99987 678999999999999 899999999999998864 688999999998 55 678899999999888
Q ss_pred -ccC
Q psy13014 210 -LHP 212 (229)
Q Consensus 210 -~~p 212 (229)
.+|
T Consensus 431 ~~~~ 434 (490)
T 2xm6_A 431 TNDM 434 (490)
T ss_dssp HHHC
T ss_pred HCCC
Confidence 763
No 181
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.41 E-value=4.6e-13 Score=88.30 Aligned_cols=91 Identities=20% Similarity=0.178 Sum_probs=68.0
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHH-HHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHH
Q psy13014 72 KDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAV-FYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVY 150 (229)
Q Consensus 72 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 150 (229)
+..|..+...|++++|+..|++++..+|.+ +. +++++|.+ +..+|++++|+.+|+++++++|++..++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-----~~~~~~~lg~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG-----KDEAYYLMGNA------YRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST-----HHHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc-----HHHHHHHHHHH------HHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 456777777788888888888888877777 77 77778888 7777888888888888888887777766
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHhCCCcH
Q psy13014 151 QRRARLYQQSDKLDEALADYQKILELDPNNR 181 (229)
Q Consensus 151 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 181 (229)
.+ +.+.+++..|++++..+|+++
T Consensus 73 ~~--------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 73 AR--------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HH--------HHHHHHHHHHCCTTHHHHCCS
T ss_pred HH--------HHHHHHHHHHHHHhccCcccc
Confidence 44 566777777777777766553
No 182
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.41 E-value=4.6e-12 Score=107.18 Aligned_cols=143 Identities=12% Similarity=-0.036 Sum_probs=80.1
Q ss_pred CCchHHHHHHHHHHHHH----hhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH----ccCH
Q psy13014 13 NPSFLYTIYFSCFILFI----LFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFR----LNQW 84 (229)
Q Consensus 13 ~p~~~~~~~~~~~~~~~----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~ 84 (229)
++.++.+++.+|.++.. . +++++|..+|+++... .++.+++.+|..+.. .+++
T Consensus 35 ~~g~~~a~~~lg~~y~~g~~~~-~~~~~A~~~~~~a~~~------------------~~~~a~~~Lg~~y~~g~g~~~~~ 95 (490)
T 2xm6_A 35 ESGEAKAQLELGYRYFQGNETT-KDLTQAMDWFRRAAEQ------------------GYTPAEYVLGLRYMNGEGVPQDY 95 (490)
T ss_dssp HTTCHHHHHHHHHHHHHTSSSC-CCHHHHHHHHHHHHHT------------------TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred HCCCHHHHHHHHHHHHcCCCCC-cCHHHHHHHHHHHHHC------------------CCHHHHHHHHHHHHcCCCCCCCH
Confidence 56789999999999988 7 8999999999887621 233445555555555 5555
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhc----cCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh-
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLS----LEKPDQSILACSKAITLNPSYLKVYQRRARLYQQ- 159 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~- 159 (229)
++|+..|+++... .+ +.+++.+|.+ |.. .+++++|+.+|+++.+. +++.+++.+|.+|..
T Consensus 96 ~~A~~~~~~a~~~--~~-----~~a~~~Lg~~------y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g 160 (490)
T 2xm6_A 96 AQAVIWYKKAALK--GL-----PQAQQNLGVM------YHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFEG 160 (490)
T ss_dssp HHHHHHHHHHHHT--TC-----HHHHHHHHHH------HHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC--CC-----HHHHHHHHHH------HHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcC
Confidence 5555555555443 22 4444555555 444 44555555555554442 344444555555444
Q ss_pred ---cccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 160 ---SDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 160 ---~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
.+++++|+.+|+++++. .++.++..++.++
T Consensus 161 ~g~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y 193 (490)
T 2xm6_A 161 DGVTRDYVMAREWYSKAAEQ--GNVWSCNQLGYMY 193 (490)
T ss_dssp SSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHH
Confidence 44455555555544443 2344444444444
No 183
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.41 E-value=4.4e-12 Score=103.22 Aligned_cols=174 Identities=12% Similarity=-0.033 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy13014 17 LYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALR 96 (229)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 96 (229)
..++...|.++... |+++++...+++++...+ .........++..+|.++...|++++|+..+++++.
T Consensus 14 ~~~~~~~a~~~~~~-g~~~~A~~~~~~al~~~~-----------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 81 (373)
T 1hz4_A 14 AEFNALRAQVAIND-GNPDEAERLAKLALEELP-----------PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQ 81 (373)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTCC-----------TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC-CCHHHHHHHHHHHHHcCC-----------CCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 35677888888888 999999999988763211 011223556788999999999999999999999999
Q ss_pred hCCCCCch-hhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC--------CCcHHHHHHHHHHHHhcccHHHHH
Q psy13014 97 SCPRSCSV-SRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN--------PSYLKVYQRRARLYQQSDKLDEAL 167 (229)
Q Consensus 97 ~~p~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~~~~~~A~ 167 (229)
+.|..... ....++.++|.+ +...|++++|+..+++++.+. |....++.++|.++...|++++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~la~~------~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 155 (373)
T 1hz4_A 82 MARQHDVWHYALWSLIQQSEI------LFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAE 155 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhcCcHHHHHHHHHHHHHH------HHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHH
Confidence 87654322 234567889999 999999999999999999874 334667888999999999999999
Q ss_pred HHHHHHHHhCCCc-----HHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 168 ADYQKILELDPNN-----RDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 168 ~~~~~al~~~p~~-----~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
..+++++.+.|.. ..++..++.++ ...++..+|...+.++.
T Consensus 156 ~~~~~al~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~l~~a~ 201 (373)
T 1hz4_A 156 ASARSGIEVLSSYQPQQQLQCLAMLIQCS-LARGDLDNARSQLNRLE 201 (373)
T ss_dssp HHHHHHHHHTTTSCGGGGHHHHHHHHHHH-HHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCcHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHH
Confidence 9999999998753 35677888888 78888999988888876
No 184
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.40 E-value=1e-12 Score=110.39 Aligned_cols=172 Identities=9% Similarity=-0.132 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHHHHhhh---hhhhhHHHHHHHHHHHH---------------------HHHHHHHhhhhhhhHHHHHHHH
Q psy13014 16 FLYTIYFSCFILFILFS---EIRTDCHQFERQVFYIQ---------------------FIFHVLFYLFCSQKLEQTAISL 71 (229)
Q Consensus 16 ~~~~~~~~~~~~~~~~~---~~~~a~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~ 71 (229)
++.+++.+|.++... | ++++|..+|+++...-+ .....+.++.... +.++.++
T Consensus 175 ~~~a~~~Lg~~~~~~-g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa--~g~~~a~ 251 (452)
T 3e4b_A 175 TDICYVELATVYQKK-QQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA--PGYPASW 251 (452)
T ss_dssp CTTHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG--GGSTHHH
T ss_pred CHHHHHHHHHHHHHc-CCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc--CCCHHHH
Confidence 334888999998887 8 89999998887763210 0001111222111 5556666
Q ss_pred HHHHHH-H--HHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccC-----ChHHHHHHHHHHHhcC
Q psy13014 72 KDEGNA-L--FRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLE-----KPDQSILACSKAITLN 143 (229)
Q Consensus 72 ~~~g~~-~--~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~-----~~~~A~~~~~~al~~~ 143 (229)
+.+|.+ + ...+++++|+..|+++.... + +.+++++|.+ |. .| ++++|+.+|+++.
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~-----~~A~~~Lg~~------y~-~G~g~~~d~~~A~~~~~~Aa--- 314 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAAD--Q-----PRAELLLGKL------YY-EGKWVPADAKAAEAHFEKAV--- 314 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--C-----HHHHHHHHHH------HH-HCSSSCCCHHHHHHHHHTTT---
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--C-----HHHHHHHHHH------HH-cCCCCCCCHHHHHHHHHHHh---
Confidence 677766 3 35667777777777766543 4 6667777766 65 34 6777777777766
Q ss_pred CCcHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHH---Hhhhhhccccccccc
Q psy13014 144 PSYLKVYQRRARLYQQ----SDKLDEALADYQKILELDPNNRDAYVATKVSPDLK---LKEKNGATKLSPDVF 209 (229)
Q Consensus 144 p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~---~~~~~~a~~~~~~~~ 209 (229)
|.++.+++++|.+|.. ..++++|+.+|+++.+ +.++.+.++++.++..- .++..+|...|.++.
T Consensus 315 ~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~--~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~ 385 (452)
T 3e4b_A 315 GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR--NGQNSADFAIAQLFSQGKGTKPDPLNAYVFSQLAK 385 (452)
T ss_dssp TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT--TTCTTHHHHHHHHHHSCTTBCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh--hChHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 6677777777766665 3367777777777665 34566666777666211 224555555555554
No 185
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.40 E-value=8.8e-12 Score=101.40 Aligned_cols=189 Identities=11% Similarity=0.042 Sum_probs=141.2
Q ss_pred chhhcccCCchH-----HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q psy13014 6 YQQELSKNPSFL-----YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFR 80 (229)
Q Consensus 6 ~~~~l~~~p~~~-----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (229)
+++++...|... .++..+|.++... |++++|...+++++...+. .........++..+|.++..
T Consensus 37 ~~~al~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~~----------~~~~~~~~~~~~~la~~~~~ 105 (373)
T 1hz4_A 37 AKLALEELPPGWFYSRIVATSVLGEVLHCK-GELTRSLALMQQTEQMARQ----------HDVWHYALWSLIQQSEILFA 105 (373)
T ss_dssp HHHHHHTCCTTCHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHHH----------TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCchhHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHh----------cCcHHHHHHHHHHHHHHHHH
Confidence 455666666543 2577888899888 9999999999888743321 01223445678899999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCc---hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC-----cHHHHHH
Q psy13014 81 LNQWSESLAKYNEALRSCPRSCS---VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS-----YLKVYQR 152 (229)
Q Consensus 81 ~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-----~~~~~~~ 152 (229)
.|++++|+..+++++...+.... .....++.++|.+ +...|++++|+.++++++.+.+. ...++..
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~------~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 179 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQL------LWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAM 179 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHH
Confidence 99999999999999998632111 1236778899999 99999999999999999998765 3567889
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhCCC--cHHHHH-----HhccCchHHHhhhhhccccccccc-ccC
Q psy13014 153 RARLYQQSDKLDEALADYQKILELDPN--NRDAYV-----ATKVSPDLKLKEKNGATKLSPDVF-LHP 212 (229)
Q Consensus 153 la~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~-----~l~~~~~~~~~~~~~a~~~~~~~~-~~p 212 (229)
+|.++...|++++|...+++++.+.+. .+..+. .++.++ ...++..+|...+.+++ ..|
T Consensus 180 la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~A~~~~~~a~~~~~ 246 (373)
T 1hz4_A 180 LIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYW-QMTGDKAAAANWLRHTAKPEF 246 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHH-HHCCCHHHHHHHHHhCCCCCC
Confidence 999999999999999999999987432 221221 222334 56677888888777776 544
No 186
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.40 E-value=1.4e-12 Score=84.17 Aligned_cols=79 Identities=32% Similarity=0.402 Sum_probs=76.7
Q ss_pred HHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHH
Q psy13014 107 AVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVA 186 (229)
Q Consensus 107 ~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 186 (229)
+.++..+|.+ +...|++++|+.++++++..+|+++.+++.+|.++...|++++|+..|+++++++|+++.++.+
T Consensus 9 ~~~~~~la~~------~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~ 82 (91)
T 1na3_A 9 AEAWYNLGNA------YYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQN 82 (91)
T ss_dssp HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHH------HHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 7889999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCc
Q psy13014 187 TKVSP 191 (229)
Q Consensus 187 l~~~~ 191 (229)
++.++
T Consensus 83 l~~~~ 87 (91)
T 1na3_A 83 LGNAK 87 (91)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
No 187
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.36 E-value=4.9e-12 Score=106.24 Aligned_cols=129 Identities=12% Similarity=0.045 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhcc----CChHHHHHHHHHH
Q psy13014 67 TAISLKDEGNALFRLN---QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSL----EKPDQSILACSKA 139 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~----~~~~~A~~~~~~a 139 (229)
++.+++.+|.++...| ++++|+..|+++....|.. +..++++|.+ |... +++++|+.+|+++
T Consensus 175 ~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~-----a~~~~~Lg~~------y~~g~~~~~d~~~A~~~~~~a 243 (452)
T 3e4b_A 175 TDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVT-----AQRVDSVARV------LGDATLGTPDEKTAQALLEKI 243 (452)
T ss_dssp CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSC-----HHHHHHHHHH------HTCGGGSSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHH-----HHHHHHHHHH------HhCCCCCCCCHHHHHHHHHHH
Confidence 4458899999999999 9999999999999999988 8888999999 8665 7999999999998
Q ss_pred HhcCCCcHHHHHHHHHH-H--HhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHh-----hhhhccccccccccc
Q psy13014 140 ITLNPSYLKVYQRRARL-Y--QQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLK-----EKNGATKLSPDVFLH 211 (229)
Q Consensus 140 l~~~p~~~~~~~~la~~-~--~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~-----~~~~a~~~~~~~~~~ 211 (229)
. |.++.+++++|.+ + ...+++++|+.+|+++.+.+ ++.+++++|.++ . .+ +..+|++.|.++.
T Consensus 244 a---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y-~-~G~g~~~d~~~A~~~~~~Aa-- 314 (452)
T 3e4b_A 244 A---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLY-Y-EGKWVPADAKAAEAHFEKAV-- 314 (452)
T ss_dssp G---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHH-H-HCSSSCCCHHHHHHHHHTTT--
T ss_pred c---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHH-H-cCCCCCCCHHHHHHHHHHHh--
Confidence 8 8899999999998 4 56889999999999988654 888999999888 4 33 7888888888877
Q ss_pred CCCc
Q psy13014 212 PGQP 215 (229)
Q Consensus 212 p~~~ 215 (229)
|++.
T Consensus 315 ~g~~ 318 (452)
T 3e4b_A 315 GREV 318 (452)
T ss_dssp TTCH
T ss_pred CCCH
Confidence 5443
No 188
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.34 E-value=1.8e-12 Score=86.04 Aligned_cols=74 Identities=16% Similarity=0.347 Sum_probs=67.8
Q ss_pred hCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy13014 97 SCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILEL 176 (229)
Q Consensus 97 ~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 176 (229)
.+|++ +.+++.+|.+ ++..|++++|+.+|+++++++|+++.+|+.+|.++..+|++++|+..|++++++
T Consensus 2 ~~p~~-----~~~~~~lg~~------~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 2 EDPED-----PFTRYALAQE------HLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp ---CC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCccC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 36777 9999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcH
Q psy13014 177 DPNNR 181 (229)
Q Consensus 177 ~p~~~ 181 (229)
.|...
T Consensus 71 ~~~~~ 75 (100)
T 3ma5_A 71 AREEG 75 (100)
T ss_dssp HHHHS
T ss_pred hhcCC
Confidence 77543
No 189
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.34 E-value=4.6e-12 Score=83.44 Aligned_cols=91 Identities=13% Similarity=0.170 Sum_probs=79.4
Q ss_pred HhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH-HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhcc
Q psy13014 111 ANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK-VYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKV 189 (229)
Q Consensus 111 ~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 189 (229)
+.+|.+ +...|++++|+..|+++++.+|+++. +++.+|.++..+|++++|+..|+++++++|++..++..
T Consensus 4 ~~~a~~------~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--- 74 (99)
T 2kc7_A 4 LKTIKE------LINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--- 74 (99)
T ss_dssp HHHHHH------HHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH---
T ss_pred HHHHHH------HHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH---
Confidence 457788 99999999999999999999999999 99999999999999999999999999999999988744
Q ss_pred CchHHHhhhhhccccccccc-ccCCCcc
Q psy13014 190 SPDLKLKEKNGATKLSPDVF-LHPGQPQ 216 (229)
Q Consensus 190 ~~~~~~~~~~~a~~~~~~~~-~~p~~~~ 216 (229)
+.+.+++..|.++. .+|++..
T Consensus 75 ------~~~~~a~~~~~~~~~~~p~~~~ 96 (99)
T 2kc7_A 75 ------KMVMDILNFYNKDMYNQLEHHH 96 (99)
T ss_dssp ------HHHHHHHHHHCCTTHHHHCCSS
T ss_pred ------HHHHHHHHHHHHHhccCccccc
Confidence 45566677777777 7775543
No 190
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.30 E-value=1.4e-11 Score=83.41 Aligned_cols=90 Identities=11% Similarity=0.056 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 62 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
...|.++.+++.+|.++...|++++|+..|++++.++|.+ ..++.++|.+ +..+|++++|+..|++++.
T Consensus 13 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~~~~la~~------~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 13 AQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY-----SVAWKWLGKT------LQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp TTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHH
Confidence 5667888999999999999999999999999999999999 9999999999 9999999999999999999
Q ss_pred cCCC--cHHHHHHHHHHHHhccc
Q psy13014 142 LNPS--YLKVYQRRARLYQQSDK 162 (229)
Q Consensus 142 ~~p~--~~~~~~~la~~~~~~~~ 162 (229)
+.|. +......+...+..+++
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 82 AAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHH
T ss_pred hccccccHHHHHHHHHHHHHhcc
Confidence 9874 34455555555544443
No 191
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.25 E-value=2.4e-11 Score=80.47 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC
Q psy13014 64 LEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN 143 (229)
Q Consensus 64 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 143 (229)
.|.++.+++.+|.++...|++++|+..|+++++++|++ +.+|.++|.+ +..+|++++|+..|++++++.
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~lg~~------~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDY-----VGTYYHLGKL------YERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----THHHHHHHHH------HHHTTCHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHhhh
Confidence 47788899999999999999999999999999999999 9999999999 999999999999999999987
Q ss_pred CCc--HHHHHHHHHHHHhc
Q psy13014 144 PSY--LKVYQRRARLYQQS 160 (229)
Q Consensus 144 p~~--~~~~~~la~~~~~~ 160 (229)
|.+ ......+...+...
T Consensus 72 ~~~~~~~~~~~l~~~l~~~ 90 (100)
T 3ma5_A 72 REEGTQKDLSELQDAKLKA 90 (100)
T ss_dssp HHHSCHHHHHHHHHHHHHH
T ss_pred hcCCchhHHHHHHHHHHHc
Confidence 643 34444444444433
No 192
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.23 E-value=2.9e-10 Score=79.91 Aligned_cols=121 Identities=10% Similarity=-0.056 Sum_probs=101.4
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHH
Q psy13014 32 SEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYA 111 (229)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 111 (229)
+++++|..+|+++.. .. ++.+. +|.++...+..++|+..|+++.+. .+ +.+++
T Consensus 9 ~d~~~A~~~~~~aa~----------------~g--~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~-----~~a~~ 61 (138)
T 1klx_A 9 KDLKKAIQYYVKACE----------------LN--EMFGC--LSLVSNSQINKQKLFQYLSKACEL--NS-----GNGCR 61 (138)
T ss_dssp HHHHHHHHHHHHHHH----------------TT--CTTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TC-----HHHHH
T ss_pred cCHHHHHHHHHHHHc----------------CC--CHhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CC-----HHHHH
Confidence 577888888877761 22 23333 999999999999999999999997 45 89999
Q ss_pred hHhhhhhhhHHhhc----cCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh----cccHHHHHHHHHHHHHhCCCcHHH
Q psy13014 112 NRSAALEKLASYLS----LEKPDQSILACSKAITLNPSYLKVYQRRARLYQQ----SDKLDEALADYQKILELDPNNRDA 183 (229)
Q Consensus 112 ~lg~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~----~~~~~~A~~~~~~al~~~p~~~~~ 183 (229)
++|.+ |.. .+++++|+.+|+++.+. .++.+++++|.+|.. .+++++|+.+|+++.+.. ++.+
T Consensus 62 ~Lg~~------y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A 131 (138)
T 1klx_A 62 FLGDF------YENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDA 131 (138)
T ss_dssp HHHHH------HHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHH
T ss_pred HHHHH------HHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHH
Confidence 99999 988 89999999999999987 689999999999999 899999999999999884 5666
Q ss_pred HHHhcc
Q psy13014 184 YVATKV 189 (229)
Q Consensus 184 ~~~l~~ 189 (229)
..+++.
T Consensus 132 ~~~l~~ 137 (138)
T 1klx_A 132 CGILNN 137 (138)
T ss_dssp HHHC--
T ss_pred HHHHhh
Confidence 666654
No 193
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.20 E-value=4.1e-11 Score=110.17 Aligned_cols=132 Identities=9% Similarity=0.009 Sum_probs=94.3
Q ss_pred chhhccc--CCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC
Q psy13014 6 YQQELSK--NPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 6 ~~~~l~~--~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
|++|++. ..+.+.+|+.+|.++... |++++|+..|.++ +++..+...|.++.+.|+
T Consensus 1092 ldrAiE~Aervn~p~vWsqLAKAql~~-G~~kEAIdsYiKA---------------------dD~say~eVa~~~~~lGk 1149 (1630)
T 1xi4_A 1092 LDRAYEFAERCNEPAVWSQLAKAQLQK-GMVKEAIDSYIKA---------------------DDPSSYMEVVQAANTSGN 1149 (1630)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhC-CCHHHHHHHHHhc---------------------CChHHHHHHHHHHHHcCC
Confidence 4444442 467789999999999999 9999999988543 456678889999999999
Q ss_pred HHHHHHHHHHHHHhCCCCC-c---------------------hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 84 WSESLAKYNEALRSCPRSC-S---------------------VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~~-~---------------------~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
|++|+++|..+.+..+... + ......+..+|.+ ++..|+|++|+.+|.++
T Consensus 1150 yEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~------le~eg~YeeA~~~Y~kA-- 1221 (1630)
T 1xi4_A 1150 WEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDR------CYDEKMYDAAKLLYNNV-- 1221 (1630)
T ss_pred HHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHH------HHhcCCHHHHHHHHHhh--
Confidence 9999999988887764420 0 0012234456666 67777777777777764
Q ss_pred cCCCcHHHHHHHHHHHHhcccHHHHHHHHHHH
Q psy13014 142 LNPSYLKVYQRRARLYQQSDKLDEALADYQKI 173 (229)
Q Consensus 142 ~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 173 (229)
..|..+|.++.++|++++|++.++++
T Consensus 1222 ------~ny~rLA~tLvkLge~q~AIEaarKA 1247 (1630)
T 1xi4_A 1222 ------SNFGRLASTLVHLGEYQAAVDGARKA 1247 (1630)
T ss_pred ------hHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 35666777777777777777777766
No 194
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.18 E-value=5.3e-10 Score=88.60 Aligned_cols=165 Identities=9% Similarity=0.004 Sum_probs=127.1
Q ss_pred chhhcccCC--chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHH------HHHHHHHHHHHH
Q psy13014 6 YQQELSKNP--SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLE------QTAISLKDEGNA 77 (229)
Q Consensus 6 ~~~~l~~~p--~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~ 77 (229)
+.+.+..+| ++..++...+.++... |+.+.|...+++.. ...+ +........|.+
T Consensus 123 l~~~i~~~~~~~~lea~~l~vqi~L~~-~r~d~A~k~l~~~~----------------~~~~d~~~~~d~~l~~Laea~v 185 (310)
T 3mv2_B 123 CVEGIDNDEAEGTTELLLLAIEVALLN-NNVSTASTIFDNYT----------------NAIEDTVSGDNEMILNLAESYI 185 (310)
T ss_dssp HHHHHTSSCSTTHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH----------------HHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCcCcHHHHHHHHHHHHHC-CCHHHHHHHHHHHH----------------hcCccccccchHHHHHHHHHHH
Confidence 345566676 8999999999999999 99999999998765 2333 333344444555
Q ss_pred HHHcc--CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc----------CCC
Q psy13014 78 LFRLN--QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL----------NPS 145 (229)
Q Consensus 78 ~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~----------~p~ 145 (229)
.+..| ++.+|...|+++....|+.. ....+.+ + +..+|++++|...++.+++. +|+
T Consensus 186 ~l~~g~~~~q~A~~~f~El~~~~p~~~---~~~lLln---~------~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~ 253 (310)
T 3mv2_B 186 KFATNKETATSNFYYYEELSQTFPTWK---TQLGLLN---L------HLQQRNIAEAQGIVELLLSDYYSVEQKENAVLY 253 (310)
T ss_dssp HHHHTCSTTTHHHHHHHHHHTTSCSHH---HHHHHHH---H------HHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSS
T ss_pred HHHhCCccHHHHHHHHHHHHHhCCCcc---cHHHHHH---H------HHHcCCHHHHHHHHHHHHHhcccccccccCCCC
Confidence 66666 99999999999998888620 0334444 8 99999999999999988876 589
Q ss_pred cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhcccccc
Q psy13014 146 YLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSP 206 (229)
Q Consensus 146 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~ 206 (229)
++.++.++..+...+|+ +|.+++.++.+.+|+++.+.... ++...+.++...|.
T Consensus 254 ~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~-----~k~~~Fd~~~~ky~ 307 (310)
T 3mv2_B 254 KPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQ-----EIDAKFDELVRKYD 307 (310)
T ss_dssp HHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHH-----HHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHH-----HHHHHHHHHHHHhc
Confidence 99999999999999998 89999999999999999776421 44445666665554
No 195
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.16 E-value=7.6e-11 Score=97.56 Aligned_cols=174 Identities=8% Similarity=0.002 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 18 YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
.++..+|.++... |+++++...+.+.+...+ ..........+...+|.++...|++++|+.++++++..
T Consensus 56 ~al~~l~~~y~~~-~~~~~a~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~ 124 (434)
T 4b4t_Q 56 TSILELGQLYVTM-GAKDKLREFIPHSTEYMM----------QFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEF 124 (434)
T ss_dssp HHHHHHHHHHHHH-TCHHHHHHHHHHTHHHHH----------TSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHH----------HccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 4678899999999 999999999987764322 11122334456777888999999999999999999987
Q ss_pred CCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc------CCCcHHHHHHHHHHHHhcccHHHHHHHH
Q psy13014 98 CPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL------NPSYLKVYQRRARLYQQSDKLDEALADY 170 (229)
Q Consensus 98 ~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~la~~~~~~~~~~~A~~~~ 170 (229)
.+.... ..+..++.++|.+ +...|+|++|+..+.+++.. .+....++..+|.++..+|++++|...+
T Consensus 125 ~~~~~~~~~~~~~~~~la~~------~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 198 (434)
T 4b4t_Q 125 AKREKRVFLKHSLSIKLATL------HYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASL 198 (434)
T ss_dssp HHHSSCCSSHHHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHhCccHHHHHHHHHHHHH------HHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 543222 2257889999999 99999999999999998875 3444678999999999999999999999
Q ss_pred HHHHHhCCCcH-------HHHHHhccCchHHHhhhhhccccccccc
Q psy13014 171 QKILELDPNNR-------DAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 171 ~~al~~~p~~~-------~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
++++.+.+... ..+..++.++ ...+++.+|...+..++
T Consensus 199 ~~al~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~y~~A~~~~~~a~ 243 (434)
T 4b4t_Q 199 TAARTAANSIYCPTQTVAELDLMSGILH-CEDKDYKTAFSYFFESF 243 (434)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHHHHT-TSSSCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCchHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHH
Confidence 99998754322 2334444444 44456666666665554
No 196
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.12 E-value=4.5e-10 Score=79.36 Aligned_cols=98 Identities=10% Similarity=0.015 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccC---ChHHHHHHHHHHHhcC-C-CcHHHHHHHHHHH
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLE---KPDQSILACSKAITLN-P-SYLKVYQRRARLY 157 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~~~~~la~~~ 157 (229)
....+.+.|.+.+..++.+ ..+.+++|.+ +.+.+ +.++++..++.+++.+ | ++.+++|++|..+
T Consensus 13 ~l~~~~~~y~~e~~~~~~~-----~~~~F~ya~~------Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~ 81 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVS-----KSTQFEYAWC------LVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 81 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCC-----HHHHHHHHHH------HHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCc-----HHHHHHHHHH------HHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHH
Confidence 3467778888888888877 9999999999 99988 6679999999999998 7 5789999999999
Q ss_pred HhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 158 QQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 158 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
.++|+|++|..+++++++++|++..+......+.
T Consensus 82 ~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 82 YRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999998777776
No 197
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.09 E-value=2.8e-09 Score=98.31 Aligned_cols=160 Identities=10% Similarity=-0.025 Sum_probs=123.8
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHH----hhhhhh--hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 24 CFILFILFSEIRTDCHQFERQVFYIQFIFHVLF----YLFCSQ--KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 24 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
|.++... |.+++|...|+++..........+. +....+ ...+.+.+|+.+|.++...|++++|+..|.++
T Consensus 1056 A~Iai~l-glyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1056 ANIAISN-ELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHhC-CCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 8888888 9999999999887543332222221 111111 23467889999999999999999999999886
Q ss_pred CCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC---------------------------cHHHH
Q psy13014 98 CPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS---------------------------YLKVY 150 (229)
Q Consensus 98 ~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---------------------------~~~~~ 150 (229)
++ +..|..+|.+ +.++|++++|++++..+++..++ +...+
T Consensus 1132 --dD-----~say~eVa~~------~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~ 1198 (1630)
T 1xi4_A 1132 --DD-----PSSYMEVVQA------ANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHI 1198 (1630)
T ss_pred --CC-----hHHHHHHHHH------HHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHH
Confidence 55 8899999999 99999999999999887765533 23356
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 151 QRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 151 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
..+|..+...|+|++|+..|.++ ..|..++.++ .+++++.+|++.++++.
T Consensus 1199 ~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tL-vkLge~q~AIEaarKA~ 1248 (1630)
T 1xi4_A 1199 QQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTL-VHLGEYQAAVDGARKAN 1248 (1630)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHH-HHhCCHHHHHHHHHHhC
Confidence 67888899999999999999886 4777778777 77888888888887764
No 198
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.09 E-value=1.4e-09 Score=92.05 Aligned_cols=141 Identities=10% Similarity=-0.054 Sum_probs=111.0
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CCC
Q psy13014 27 LFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSC-----PRS 101 (229)
Q Consensus 27 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~~ 101 (229)
+... |++++|...+++++.... .......|..+..+.++|.+|..+|+|++|+.++++++.+. |++
T Consensus 319 ~~~q-g~~~eA~~l~~~aL~~~~--------~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H 389 (490)
T 3n71_A 319 ARSE-GLYHEVVKLCRECLEKQE--------PVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNN 389 (490)
T ss_dssp HHTT-TCHHHHHHHHHHHHHHHT--------TTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHhC-CCHHHHHHHHHHHHHHHH--------HhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4455 889999998888773221 11224678899999999999999999999999999999873 333
Q ss_pred CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-----CCCcHH---HHHHHHHHHHhcccHHHHHHHHHHH
Q psy13014 102 CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL-----NPSYLK---VYQRRARLYQQSDKLDEALADYQKI 173 (229)
Q Consensus 102 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~---~~~~la~~~~~~~~~~~A~~~~~~a 173 (229)
...+..+.++|.+ |..+|++++|+..+++|+.+ .|+++. ...+++.++..++.+++|...|.++
T Consensus 390 --p~~a~~l~nLa~~------~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 390 --AQLGMAVMRAGLT------NWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKM 461 (490)
T ss_dssp --HHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHH------HHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3357789999999 99999999999999999975 577754 5678899999999999999999998
Q ss_pred HHhCCCcHHHH
Q psy13014 174 LELDPNNRDAY 184 (229)
Q Consensus 174 l~~~p~~~~~~ 184 (229)
.+..-++...+
T Consensus 462 ~~~~~~~~~~~ 472 (490)
T 3n71_A 462 REAALNNQPMQ 472 (490)
T ss_dssp HHHHHTC----
T ss_pred HHHHhcCCCCc
Confidence 76544444443
No 199
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.08 E-value=3.1e-10 Score=95.98 Aligned_cols=134 Identities=7% Similarity=-0.022 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc---
Q psy13014 69 ISLKDEGNALFRLNQWSESLAKYNEALRSCPRS---CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL--- 142 (229)
Q Consensus 69 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~--- 142 (229)
......+..+..+|+|++|+..+++++.+...- .......++.++|.+ |..+|+|++|+.++++++.+
T Consensus 310 ~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~------y~~~g~~~eA~~~~~~aL~i~~~ 383 (490)
T 3n71_A 310 KDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEV------LSYLQAYEEASHYARRMVDGYMK 383 (490)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHHHHHH
Confidence 344456667788999999999999999974321 123357789999999 99999999999999999976
Q ss_pred --CCCcH---HHHHHHHHHHHhcccHHHHHHHHHHHHHh-----CCCcHHHH---HHhccCchHHHhhhhhccccccccc
Q psy13014 143 --NPSYL---KVYQRRARLYQQSDKLDEALADYQKILEL-----DPNNRDAY---VATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 143 --~p~~~---~~~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~---~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
.|+++ ..+.++|.+|..+|++++|+..|++|+.+ .|+++... .+++.+. ..++.+.+|...|.++.
T Consensus 384 ~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~-~e~~~~~~ae~~~~~~~ 462 (490)
T 3n71_A 384 LYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTE-MELRMFRQNEFMYHKMR 462 (490)
T ss_dssp HSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 45554 57899999999999999999999999965 67776544 4555555 56666777776666654
No 200
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.08 E-value=1.4e-09 Score=87.84 Aligned_cols=154 Identities=15% Similarity=0.126 Sum_probs=113.8
Q ss_pred cccCCchHH--HHHHHHHHHHHh--hhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH-
Q psy13014 10 LSKNPSFLY--TIYFSCFILFIL--FSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW- 84 (229)
Q Consensus 10 l~~~p~~~~--~~~~~~~~~~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~- 84 (229)
...-|+++. -++..|..+... .....+|...|++++ ..+|+.+.++..++.++.....+
T Consensus 187 ~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al----------------~lDP~~a~A~A~la~a~~~~~~~~ 250 (372)
T 3ly7_A 187 QKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIV----------------QSSPEFTYARAEKALVDIVRHSQH 250 (372)
T ss_dssp HHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHHHHHS
T ss_pred hccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHHhccC
Confidence 344566654 466667666554 145678888888888 67888888888888777532111
Q ss_pred ------HHHHH-HHHH--HHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHH
Q psy13014 85 ------SESLA-KYNE--ALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRAR 155 (229)
Q Consensus 85 ------~~A~~-~~~~--al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~ 155 (229)
..++. .+.. ++..+|.. +.++..+|.. +...|++++|+..+++++.++|+ ..+|..+|.
T Consensus 251 ~~~~~~~~~l~~a~~a~~a~~~~~~~-----a~~~~alal~------~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~ 318 (372)
T 3ly7_A 251 PLDEKQLAALNTEIDNIVTLPELNNL-----SIIYQIKAVS------ALVKGKTDESYQAINTGIDLEMS-WLNYVLLGK 318 (372)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhcccCCcC-----HHHHHHHHHH------HHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHH
Confidence 11111 1222 23456777 9999999999 88889999999999999999974 778899999
Q ss_pred HHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 156 LYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 156 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
++...|++++|++.|.+|+.++|..+..+..-..++
T Consensus 319 ~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~l~F 354 (372)
T 3ly7_A 319 VYEMKGMNREAADAYLTAFNLRPGANTLYWIENGIF 354 (372)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHHSSS
T ss_pred HHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhCcee
Confidence 999999999999999999999999876554444443
No 201
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.06 E-value=4.1e-10 Score=93.14 Aligned_cols=150 Identities=9% Similarity=0.051 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 18 YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
.++..+|..++.. |.+++|..+|.+. ..+..+|.++.++|+|++|++.|.++
T Consensus 123 ~a~~~IGd~~~~~-g~yeeA~~~Y~~a------------------------~n~~~LA~~L~~Lg~yq~AVea~~KA--- 174 (449)
T 1b89_A 123 AHIQQVGDRCYDE-KMYDAAKLLYNNV------------------------SNFGRLASTLVHLGEYQAAVDGARKA--- 174 (449)
T ss_dssp ---------------CTTTHHHHHHHT------------------------TCHHHHHHHHHTTTCHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHh------------------------hhHHHHHHHHHHhccHHHHHHHHHHc---
Confidence 3667777777777 7777777766533 36778888888888888888888888
Q ss_pred CCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy13014 98 CPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELD 177 (229)
Q Consensus 98 ~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 177 (229)
.+ +..|...+.+ +...|+++.|..+... +..+|++ ...+..+|.+.|++++|+..+++++.++
T Consensus 175 --~~-----~~~Wk~v~~a------Cv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le 237 (449)
T 1b89_A 175 --NS-----TRTWKEVCFA------CVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLE 237 (449)
T ss_dssp --TC-----HHHHHHHHHH------HHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred --CC-----chhHHHHHHH------HHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCc
Confidence 34 7788888888 8888888888776665 3355544 4467889999999999999999999999
Q ss_pred CCcHHHHHHhccCch-HHHhhhhhccccccccc-ccC
Q psy13014 178 PNNRDAYVATKVSPD-LKLKEKNGATKLSPDVF-LHP 212 (229)
Q Consensus 178 p~~~~~~~~l~~~~~-~~~~~~~~a~~~~~~~~-~~p 212 (229)
+.+..++..++.++. .+.+++.+.++.|...+ +.|
T Consensus 238 ~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 238 RAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp TCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 999999999998875 45566777777777776 655
No 202
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.06 E-value=7.1e-10 Score=97.23 Aligned_cols=181 Identities=10% Similarity=-0.072 Sum_probs=126.7
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhH-HHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDC-HQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
.|+++|...|.++..|+..+..+... |+..+|. ..|++++ ...|.....+...+......|+
T Consensus 331 ~Ye~aL~~~p~~~~lW~~ya~~~~~~-~~~~~a~r~il~rAi----------------~~~P~s~~Lwl~~a~~ee~~~~ 393 (679)
T 4e6h_A 331 VYMQAAQHVCFAPEIWFNMANYQGEK-NTDSTVITKYLKLGQ----------------QCIPNSAVLAFSLSEQYELNTK 393 (679)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHH-SCCTTHHHHHHHHHH----------------HHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhc-CcHHHHHHHHHHHHH----------------HhCCCCHHHHHHHHHHHHHhCC
Confidence 48899999999999999999998888 9988886 8888887 4556677788999999999999
Q ss_pred HHHHHHHHHHHHHhC-----------CCCC------chhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-CCC
Q psy13014 84 WSESLAKYNEALRSC-----------PRSC------SVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL-NPS 145 (229)
Q Consensus 84 ~~~A~~~~~~al~~~-----------p~~~------~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~-~p~ 145 (229)
+++|...|++++... |.+. ......+|...+.. ..+.|..+.|...|.+|++. .+.
T Consensus 394 ~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~------erR~~~l~~AR~vf~~A~~~~~~~ 467 (679)
T 4e6h_A 394 IPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNT------MKRIQGLAASRKIFGKCRRLKKLV 467 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHH------HHHHHCHHHHHHHHHHHHHTGGGS
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHH------HHHcCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999752 4210 00013456666666 55556666667777776665 333
Q ss_pred cHHHHHHHHHHHHhccc-HHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 146 YLKVYQRRARLYQQSDK-LDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 146 ~~~~~~~la~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
....|...|.+....++ ++.|...|+.+++..|+++..+...+... ...++...|...|++++
T Consensus 468 ~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe-~~~~~~~~AR~lferal 531 (679)
T 4e6h_A 468 TPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFL-IYVNEESQVKSLFESSI 531 (679)
T ss_dssp CTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHTCHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHH-HhCCCHHHHHHHHHHHH
Confidence 44555555555555443 66666777777766666666665555544 44555556666666555
No 203
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.04 E-value=1.7e-09 Score=70.63 Aligned_cols=74 Identities=22% Similarity=0.195 Sum_probs=67.6
Q ss_pred CCCCCchhhHHHHHhHhhhhhhhHHhhccCC---hHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q psy13014 98 CPRSCSVSRAVFYANRSAALEKLASYLSLEK---PDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKIL 174 (229)
Q Consensus 98 ~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al 174 (229)
+|++ +.++..+|.+ ++..++ .++|...+++++.++|+++.+++.+|..++..|+|++|+..|++++
T Consensus 2 ~p~~-----~~~~~~~a~a------l~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 2 NAVT-----ATQLAAKATT------LYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp CCCC-----HHHHHHHHHH------HHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCC-----HHHHHHHHHH------HHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4677 9999999999 865555 7999999999999999999999999999999999999999999999
Q ss_pred HhCCCcHH
Q psy13014 175 ELDPNNRD 182 (229)
Q Consensus 175 ~~~p~~~~ 182 (229)
+.+|.++.
T Consensus 71 ~~~p~~~~ 78 (93)
T 3bee_A 71 DSNDPNLD 78 (93)
T ss_dssp TCCCTTCC
T ss_pred hhCCCCcc
Confidence 99998443
No 204
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.04 E-value=3.2e-09 Score=87.74 Aligned_cols=188 Identities=10% Similarity=-0.037 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHh-hhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q psy13014 17 LYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFY-LFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEAL 95 (229)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 95 (229)
|.+.+-.|..+... |++++|...|.+.+...+........ ............++..+|.+|...|++++|++++.+++
T Consensus 4 p~~~l~~a~~l~~~-~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~ 82 (434)
T 4b4t_Q 4 PGSKLEEARRLVNE-KQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHST 82 (434)
T ss_dssp TTHHHHHHHHHHHH-TCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTH
T ss_pred hHHHHHHHHHHHHC-CCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 44566677778888 99999999988776211100000000 00011234555678999999999999999999999999
Q ss_pred HhCCCCCch-hhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC------CCcHHHHHHHHHHHHhcccHHHHHH
Q psy13014 96 RSCPRSCSV-SRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN------PSYLKVYQRRARLYQQSDKLDEALA 168 (229)
Q Consensus 96 ~~~p~~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~------p~~~~~~~~la~~~~~~~~~~~A~~ 168 (229)
...+..... ....+...+|.+ +...|++++|+..+.+++... +....++.++|.++...|+|++|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 156 (434)
T 4b4t_Q 83 EYMMQFAKSKTVKVLKTLIEKF------EQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLA 156 (434)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHH------CSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHccchHHHHHHHHHHHHH------HhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHH
Confidence 987654322 134567778999 999999999999999998753 3447789999999999999999999
Q ss_pred HHHHHHHh------CCCcHHHHHHhccCchHHHhhhhhccccccccc-ccC
Q psy13014 169 DYQKILEL------DPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHP 212 (229)
Q Consensus 169 ~~~~al~~------~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p 212 (229)
.+++++.. .|....++..++.++ ...+++.+|...+.+++ ..+
T Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 157 LINDLLREFKKLDDKPSLVDVHLLESKVY-HKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHTTSSCSTHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccchhHHHHHHHHHHHH-HHhCcHHHHHHHHHHHHHHhh
Confidence 99999876 344557888999998 88899999888888776 443
No 205
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.04 E-value=2.4e-09 Score=93.91 Aligned_cols=200 Identities=8% Similarity=-0.031 Sum_probs=151.0
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhh-h-----hhhhHHHHHHHHHHHHHHH
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYL-F-----CSQKLEQTAISLKDEGNAL 78 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~g~~~ 78 (229)
.|++++...|.+...++..+.+.... |+++.|...|++++..+......+... . ..........+|...+...
T Consensus 366 il~rAi~~~P~s~~Lwl~~a~~ee~~-~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~e 444 (679)
T 4e6h_A 366 YLKLGQQCIPNSAVLAFSLSEQYELN-TKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTM 444 (679)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHH
Confidence 46788999999998888888888888 999999999999886542111100000 0 0001123556888888888
Q ss_pred HHccCHHHHHHHHHHHHHh-CCCCCchhhHHHHHhHhhhhhhhHHhhccC-ChHHHHHHHHHHHhcCCCcHHHHHHHHHH
Q psy13014 79 FRLNQWSESLAKYNEALRS-CPRSCSVSRAVFYANRSAALEKLASYLSLE-KPDQSILACSKAITLNPSYLKVYQRRARL 156 (229)
Q Consensus 79 ~~~~~~~~A~~~~~~al~~-~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~la~~ 156 (229)
...|..+.|...|.+|+.. .+.. ..+|...|.+ ....+ +++.|...|+++++..|+++..|...+..
T Consensus 445 rR~~~l~~AR~vf~~A~~~~~~~~-----~~lyi~~A~l------E~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~f 513 (679)
T 4e6h_A 445 KRIQGLAASRKIFGKCRRLKKLVT-----PDIYLENAYI------EYHISKDTKTACKVLELGLKYFATDGEYINKYLDF 513 (679)
T ss_dssp HHHHCHHHHHHHHHHHHHTGGGSC-----THHHHHHHHH------HHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhcCCCC-----hHHHHHHHHH------HHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHH
Confidence 8999999999999999987 3344 5667777777 66654 59999999999999999999999999999
Q ss_pred HHhcccHHHHHHHHHHHHHhCCC---cHHHHHHhccCchHHHhhhhhccccccccc-ccCCCccc
Q psy13014 157 YQQSDKLDEALADYQKILELDPN---NRDAYVATKVSPDLKLKEKNGATKLSPDVF-LHPGQPQI 217 (229)
Q Consensus 157 ~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~-~~p~~~~~ 217 (229)
....|+.+.|...|++++...|+ ...+|....... .+.|+...+.+...++. ..|++..+
T Consensus 514 e~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE-~~~G~~~~~~~v~~R~~~~~P~~~~~ 577 (679)
T 4e6h_A 514 LIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFE-SKVGSLNSVRTLEKRFFEKFPEVNKL 577 (679)
T ss_dssp HHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHH-HHTCCSHHHHHHHHHHHHHSTTCCHH
T ss_pred HHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCCCcHH
Confidence 99999999999999999999884 455666665554 66677777777777776 66755443
No 206
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.03 E-value=8.1e-11 Score=97.33 Aligned_cols=155 Identities=12% Similarity=0.018 Sum_probs=51.0
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHH------------HHHHHhhhhhhhHHHHHHHHHHHHHHHHHcc
Q psy13014 15 SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFI------------FHVLFYLFCSQKLEQTAISLKDEGNALFRLN 82 (229)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (229)
+++.+|..+|.++... |++++|++.|.+......+. .....++........++.+...++.++.+.|
T Consensus 30 ~~~~vWs~La~A~l~~-g~~~eAIdsfika~D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg 108 (449)
T 1b89_A 30 NEPAVWSQLAKAQLQK-GMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTN 108 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CChHHHHHHHHHHHHc-CCHHHHHHHHHcCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhC
Confidence 4456999999999999 99999999886542111000 0001111111111222334444444555555
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhccc
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDK 162 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~ 162 (229)
++.++..+++ .|+ ...|..+|.+ ++..|.|++|+.+|.++ ..|..+|.++..+|+
T Consensus 109 ~l~e~e~f~~-----~pn------~~a~~~IGd~------~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~ 163 (449)
T 1b89_A 109 RLAELEEFIN-----GPN------NAHIQQVGDR------CYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGE 163 (449)
T ss_dssp CHHHHTTTTT-----CC----------------------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTC
T ss_pred CHHHHHHHHc-----CCc------HHHHHHHHHH------HHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhcc
Confidence 5555444442 122 3478888888 99999999999999976 368889999999999
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhc
Q psy13014 163 LDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGA 201 (229)
Q Consensus 163 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a 201 (229)
|++|++.++++ .++..|.....+| -..+++..|
T Consensus 164 yq~AVea~~KA-----~~~~~Wk~v~~aC-v~~~ef~lA 196 (449)
T 1b89_A 164 YQAAVDGARKA-----NSTRTWKEVCFAC-VDGKEFRLA 196 (449)
T ss_dssp HHHHHHHHHHH-----TCHHHHHHHHHHH-HHTTCHHHH
T ss_pred HHHHHHHHHHc-----CCchhHHHHHHHH-HHcCcHHHH
Confidence 99999999999 3566666655555 444444444
No 207
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=99.01 E-value=1.5e-08 Score=78.93 Aligned_cols=108 Identities=10% Similarity=0.002 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHH---c--c------CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhcc-----C
Q psy13014 64 LEQTAISLKDEGNALFR---L--N------QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSL-----E 127 (229)
Q Consensus 64 ~~~~~~~~~~~g~~~~~---~--~------~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~-----~ 127 (229)
.+.++..++..|..... . + ...+|...++++++++|+... ..+|..+|.. |... |
T Consensus 148 ~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~---GsA~~~LG~l------Y~~vPp~~gG 218 (301)
T 3u64_A 148 TRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQE---GAVWNVLTKF------YAAAPESFGG 218 (301)
T ss_dssp CGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHH---HHHHHHHHHH------HHHSCTTTTC
T ss_pred CccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCccc---CHHHHHHHHH------HHhCCCccCC
Confidence 35566666666665543 1 2 368899999999999999411 7799999999 9886 9
Q ss_pred ChHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHh-cccHHHHHHHHHHHHHhCCCc
Q psy13014 128 KPDQSILACSKAITLNPSY-LKVYQRRARLYQQ-SDKLDEALADYQKILELDPNN 180 (229)
Q Consensus 128 ~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~-~~~~~~A~~~~~~al~~~p~~ 180 (229)
+.++|.++|++|++++|+. ..+++.+|..+.. .|++++|...++++++.+|..
T Consensus 219 d~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred CHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999975 9999999999988 599999999999999998874
No 208
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.00 E-value=1.5e-09 Score=76.23 Aligned_cols=108 Identities=18% Similarity=0.112 Sum_probs=95.6
Q ss_pred cCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh--
Q psy13014 82 NQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQ-- 159 (229)
Q Consensus 82 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-- 159 (229)
+++++|+..|+++.+..... +. +|.+ |...+..++|+.+|+++.+. .++.+++++|.+|..
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~-----a~----lg~~------y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~ 71 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMF-----GC----LSLV------SNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGK 71 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTT-----HH----HHHH------TCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCS
T ss_pred cCHHHHHHHHHHHHcCCCHh-----hh----HHHH------HHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCC
Confidence 57899999999999987543 33 9999 99999999999999999987 789999999999999
Q ss_pred --cccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHH----Hhhhhhccccccccc
Q psy13014 160 --SDKLDEALADYQKILELDPNNRDAYVATKVSPDLK----LKEKNGATKLSPDVF 209 (229)
Q Consensus 160 --~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~----~~~~~~a~~~~~~~~ 209 (229)
.+++++|+.+|+++.+. .++.+..+++.++ .. .++..+|++.|.++.
T Consensus 72 g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y-~~G~g~~~d~~~A~~~~~~Aa 124 (138)
T 1klx_A 72 YVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQ-YAGKGVVKNEKQAVKTFEKAC 124 (138)
T ss_dssp SSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHH-HHTSSSCCCHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHH-HCCCCCCcCHHHHHHHHHHHH
Confidence 89999999999999987 6799999999998 55 677888888888776
No 209
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.98 E-value=4e-09 Score=70.28 Aligned_cols=78 Identities=22% Similarity=0.091 Sum_probs=71.1
Q ss_pred HHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC-------CCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q psy13014 107 AVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN-------PSYLKVYQRRARLYQQSDKLDEALADYQKILELDPN 179 (229)
Q Consensus 107 ~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~-------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 179 (229)
+.-++.+|.. ++..++|..|+.+|++|++.. +..+.++..+|.++..+|++++|+..++++++++|+
T Consensus 5 a~dc~~lG~~------~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 5 AEDCFELGKV------AYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHH------HHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC
Confidence 6678899999 999999999999999999863 456789999999999999999999999999999999
Q ss_pred cHHHHHHhccC
Q psy13014 180 NRDAYVATKVS 190 (229)
Q Consensus 180 ~~~~~~~l~~~ 190 (229)
++.+..+++.+
T Consensus 79 ~~~~~~n~~~~ 89 (104)
T 2v5f_A 79 HQRANGNLKYF 89 (104)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHhhHHHH
Confidence 99999988843
No 210
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.93 E-value=1.4e-08 Score=67.67 Aligned_cols=81 Identities=15% Similarity=0.163 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCC
Q psy13014 68 AISLKDEGNALFRLNQWSESLAKYNEALRSCPRS--CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPS 145 (229)
Q Consensus 68 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 145 (229)
+.-++.+|..++..++|..|+..|++|+...+.. .....+.++..+|.+ ++++|+++.|+.+++++++++|+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~------~~~~g~~~~A~~~~~~al~l~P~ 78 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYA------VYQQGDLDKALLLTKKLLELDPE 78 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHH------HHHccCHHHHHHHHHHHHhcCCC
Confidence 3457899999999999999999999999974221 112348899999999 99999999999999999999999
Q ss_pred cHHHHHHHH
Q psy13014 146 YLKVYQRRA 154 (229)
Q Consensus 146 ~~~~~~~la 154 (229)
+..+..+++
T Consensus 79 ~~~~~~n~~ 87 (104)
T 2v5f_A 79 HQRANGNLK 87 (104)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHhhHH
Confidence 999988887
No 211
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.88 E-value=2.4e-08 Score=80.61 Aligned_cols=124 Identities=13% Similarity=0.068 Sum_probs=94.1
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccC
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIR-TDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQ 83 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (229)
.|+++++++|++..++..+++++... .... ......... . ............+..+.++..++..+...|+
T Consensus 221 l~e~Al~lDP~~a~A~A~la~a~~~~-~~~~~~~~~~~~~l----~---~a~~a~~a~~~~~~~a~~~~alal~~l~~gd 292 (372)
T 3ly7_A 221 LLGEIVQSSPEFTYARAEKALVDIVR-HSQHPLDEKQLAAL----N---TEIDNIVTLPELNNLSIIYQIKAVSALVKGK 292 (372)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHH-HHHSCCCHHHHHHH----H---HHHHHHHTCGGGTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHH-hccCCCchhhHHHH----H---HHHHHHHhcccCCcCHHHHHHHHHHHHhCCC
Confidence 57899999999999999988888644 2221 000111100 0 0000011224567888899999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH
Q psy13014 84 WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 148 (229)
+++|+..+++++.++|+ ...|..+|.+ +...|++++|++.|++|+.++|....
T Consensus 293 ~d~A~~~l~rAl~Ln~s------~~a~~llG~~------~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 293 TDESYQAINTGIDLEMS------WLNYVLLGKV------YEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHHHHCCC------HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHHHHhcCCC------HHHHHHHHHH------HHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 99999999999999964 7788999999 99999999999999999999998764
No 212
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.84 E-value=1.8e-08 Score=83.88 Aligned_cols=103 Identities=12% Similarity=0.047 Sum_probs=83.8
Q ss_pred HHHHHccCHHHHHHHHHHHHHhCCCC---CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-----CCCcH
Q psy13014 76 NALFRLNQWSESLAKYNEALRSCPRS---CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL-----NPSYL 147 (229)
Q Consensus 76 ~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~ 147 (229)
......|+|++|+..+++++.+.... ........+.++|.+ |..+|+|++|+.++++++.+ .|+++
T Consensus 306 ~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~------y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp 379 (433)
T 3qww_A 306 RRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGV------CLYMQDWEGALKYGQKIIKPYSKHYPVYSL 379 (433)
T ss_dssp HHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHHSCSSCH
T ss_pred HHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHH------HHhhcCHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 33345789999999999999973221 113357789999999 99999999999999999976 45554
Q ss_pred ---HHHHHHHHHHHhcccHHHHHHHHHHHHHh-----CCCcHHHH
Q psy13014 148 ---KVYQRRARLYQQSDKLDEALADYQKILEL-----DPNNRDAY 184 (229)
Q Consensus 148 ---~~~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~ 184 (229)
..+.++|.+|..+|++++|+..|++|+++ .|+++...
T Consensus 380 ~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 380 NVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 56999999999999999999999999976 67777554
No 213
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.83 E-value=1.7e-08 Score=71.32 Aligned_cols=84 Identities=7% Similarity=0.011 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHhC-C-CCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHH
Q psy13014 63 KLEQTAISLKDEGNALFRLN---QWSESLAKYNEALRSC-P-RSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACS 137 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~ 137 (229)
..+.+..+.+.+|.++.+.+ +.++++..++..++.+ | .. .++++++|.. ++++++|++|..+++
T Consensus 27 ~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~-----rd~lY~LAv~------~~kl~~Y~~A~~y~~ 95 (152)
T 1pc2_A 27 AGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQ-----RDYVFYLAVG------NYRLKEYEKALKYVR 95 (152)
T ss_dssp TTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHH-----HHHHHHHHHH------HHHTSCHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccch-----HHHHHHHHHH------HHHccCHHHHHHHHH
Confidence 34567889999999999988 7779999999999998 6 34 8999999999 999999999999999
Q ss_pred HHHhcCCCcHHHHHHHHHHH
Q psy13014 138 KAITLNPSYLKVYQRRARLY 157 (229)
Q Consensus 138 ~al~~~p~~~~~~~~la~~~ 157 (229)
++++++|++..+...+..+-
T Consensus 96 ~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 96 GLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHHCTTCHHHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHH
Confidence 99999999988766655443
No 214
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.80 E-value=1.3e-08 Score=66.34 Aligned_cols=72 Identities=17% Similarity=0.095 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHccC---HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 65 EQTAISLKDEGNALFRLNQ---WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~---~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
|.++..+..+|.+++..++ .++|...+++++.++|++ +.++..+|.. ++..|+|++|+.+++++++
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~-----~rA~~~lg~~------~~~~g~y~~Ai~~w~~~l~ 71 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN-----EAALSLIAND------HFISFRFQEAIDTWVLLLD 71 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHh
Confidence 5667889999999986666 799999999999999999 9999999999 9999999999999999999
Q ss_pred cCCCcH
Q psy13014 142 LNPSYL 147 (229)
Q Consensus 142 ~~p~~~ 147 (229)
.+|.++
T Consensus 72 ~~p~~~ 77 (93)
T 3bee_A 72 SNDPNL 77 (93)
T ss_dssp CCCTTC
T ss_pred hCCCCc
Confidence 999843
No 215
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.79 E-value=5.4e-08 Score=81.05 Aligned_cols=110 Identities=9% Similarity=0.079 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC---CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc----
Q psy13014 70 SLKDEGNALFRLNQWSESLAKYNEALRSCPRS---CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL---- 142 (229)
Q Consensus 70 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~---- 142 (229)
........+..+|+|++|+..+++++.+.... .......++.++|.+ |..+|+|++|+.++++++.+
T Consensus 289 ~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~------y~~~g~~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 289 ESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDA------CINLGLLEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHH------HHhhccHHHHHHHHHHHHHhHHHH
Confidence 34444556778899999999999999874321 123457789999999 99999999999999999976
Q ss_pred -CCCcH---HHHHHHHHHHHhcccHHHHHHHHHHHHHh-----CCCcHHHHH
Q psy13014 143 -NPSYL---KVYQRRARLYQQSDKLDEALADYQKILEL-----DPNNRDAYV 185 (229)
Q Consensus 143 -~p~~~---~~~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~ 185 (229)
.|+++ ..++++|.+|..+|++++|+..+++|+++ .|+++....
T Consensus 363 lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 414 (429)
T 3qwp_A 363 FPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIED 414 (429)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 35554 56999999999999999999999999966 677776554
No 216
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.69 E-value=2.7e-07 Score=62.85 Aligned_cols=98 Identities=11% Similarity=0.027 Sum_probs=83.6
Q ss_pred CHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHH---HHHHHHHHHhcC-C-CcHHHHHHHHHHH
Q psy13014 83 QWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQ---SILACSKAITLN-P-SYLKVYQRRARLY 157 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~~~~~la~~~ 157 (229)
....+...|.+....++.+ ..+.+++|.+ +.+.++... +|..++..+..+ | ..-+.+|.+|..+
T Consensus 16 ~l~~~~~~y~~e~~~~~~s-----~~~~F~yAw~------Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~ 84 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVS-----KSTQFEYAWC------LVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 84 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCC-----HHHHHHHHHH------HTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCc-----HHHHHHHHHH------HHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHH
Confidence 3456677788888877777 9999999999 988887766 999999998887 5 4677999999999
Q ss_pred HhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 158 QQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 158 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
+++|+|++|..+++.+++++|++..+......+.
T Consensus 85 yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 85 YRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999987666554
No 217
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.55 E-value=6e-07 Score=74.74 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=81.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CCCCchhh
Q psy13014 32 SEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSC-----PRSCSVSR 106 (229)
Q Consensus 32 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~~~~~~~ 106 (229)
|++++|...+++++.... .......|..+..+.++|.+|..+|+|++|+.++++++.+. |++ .+.
T Consensus 312 g~~~eA~~~~~~~L~i~~--------~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H--p~~ 381 (433)
T 3qww_A 312 KSPSELLEICELSQEKMS--------SVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYS--LNV 381 (433)
T ss_dssp SCHHHHHHHHHHHHHHHT--------TTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSC--HHH
T ss_pred cCHHHHHHHHHHHHHHhh--------CccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCC--hHH
Confidence 556777777777663211 11224678899999999999999999999999999999873 333 345
Q ss_pred HHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-----CCCcHHHH
Q psy13014 107 AVFYANRSAALEKLASYLSLEKPDQSILACSKAITL-----NPSYLKVY 150 (229)
Q Consensus 107 ~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~ 150 (229)
+..++++|.+ |..+|++++|+..|++|+++ .|+++.+-
T Consensus 382 a~~l~nLa~~------~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 424 (433)
T 3qww_A 382 ASMWLKLGRL------YMGLENKAAGEKALKKAIAIMEVAHGKDHPYIS 424 (433)
T ss_dssp HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHH
T ss_pred HHHHHHHHHH------HHhccCHHHHHHHHHHHHHHHHHHcCCCChHHH
Confidence 7789999999 99999999999999999986 58877653
No 218
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.47 E-value=3.4e-06 Score=65.72 Aligned_cols=109 Identities=11% Similarity=0.074 Sum_probs=87.7
Q ss_pred ccCCchHHHHHHHHHHHHHhhh----------hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHH--HHHHHHHHHHHH
Q psy13014 11 SKNPSFLYTIYFSCFILFILFS----------EIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQ--TAISLKDEGNAL 78 (229)
Q Consensus 11 ~~~p~~~~~~~~~~~~~~~~~~----------~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~ 78 (229)
..+|+++..++..|.+.....+ ....+...+++++ ..+|. +..++..+|..|
T Consensus 146 ~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAl----------------eLDP~~~~GsA~~~LG~lY 209 (301)
T 3u64_A 146 RCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERAC----------------DLWPSYQEGAVWNVLTKFY 209 (301)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHH----------------HHCTTHHHHHHHHHHHHHH
T ss_pred HcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHH----------------HhCCCcccCHHHHHHHHHH
Confidence 4789999999999988765322 2234444444444 45565 777999999999
Q ss_pred HHc-----cCHHHHHHHHHHHHHhCCC-CCchhhHHHHHhHhhhhhhhHHhhc-cCChHHHHHHHHHHHhcCCCc
Q psy13014 79 FRL-----NQWSESLAKYNEALRSCPR-SCSVSRAVFYANRSAALEKLASYLS-LEKPDQSILACSKAITLNPSY 146 (229)
Q Consensus 79 ~~~-----~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~ 146 (229)
... |+.++|..+|+++++++|+ + ...++..|.. +.. .|+++.|...+++++..+|..
T Consensus 210 ~~vPp~~gGd~ekA~~~ferAL~LnP~~~-----id~~v~YA~~------l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 210 AAAPESFGGGMEKAHTAFEHLTRYCSAHD-----PDHHITYADA------LCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHSCTTTTCCHHHHHHHHHHHHHHCCTTC-----SHHHHHHHHH------TTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HhCCCccCCCHHHHHHHHHHHHHhCCCCC-----chHHHHHHHH------HHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 995 9999999999999999996 5 7888889988 877 599999999999999998763
No 219
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.38 E-value=1.6e-06 Score=72.24 Aligned_cols=116 Identities=9% Similarity=-0.126 Sum_probs=86.8
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CCC
Q psy13014 27 LFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSC-----PRS 101 (229)
Q Consensus 27 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~~ 101 (229)
+... |++++|...+++++.... .......+.....+.++|.+|..+|+|++|+.++++++.+. |++
T Consensus 297 ~~~~-g~~~~a~~~~~~~L~~~~--------~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~H 367 (429)
T 3qwp_A 297 LKAH-WKWEQVLAMCQAIISSNS--------ERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSH 367 (429)
T ss_dssp HHHT-TCHHHHHHHHHHHHTCSS--------CCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHhh-ccHHHHHHHHHHHHHhcc--------CcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCC
Confidence 3344 777777777776652100 01124678889999999999999999999999999999873 333
Q ss_pred CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-----CCCcHHH---HHHHHHHHHh
Q psy13014 102 CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL-----NPSYLKV---YQRRARLYQQ 159 (229)
Q Consensus 102 ~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~---~~~la~~~~~ 159 (229)
...+..++++|.+ |..+|++++|+..+++|+++ .|+++.+ +.+++.+...
T Consensus 368 --p~~a~~l~nLa~~------~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 368 --PVRGVQVMKVGKL------QLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp --HHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHH------HHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 3457789999999 99999999999999999976 5777654 4455555543
No 220
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.35 E-value=7.7e-06 Score=69.31 Aligned_cols=168 Identities=8% Similarity=-0.043 Sum_probs=123.5
Q ss_pred cchhhcccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH-HHhhhh----------------h------
Q psy13014 5 PYQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHV-LFYLFC----------------S------ 61 (229)
Q Consensus 5 ~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~----------------~------ 61 (229)
.|++++...|..+..++..+..+... |+.+.|...+++++.. +..... +.+... .
T Consensus 201 ~ye~al~~~p~~~~lW~~ya~~~~~~-~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~ 278 (493)
T 2uy1_A 201 IHNYILDSFYYAEEVYFFYSEYLIGI-GQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAE 278 (493)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC--------
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhh
Confidence 58889999999999999999888887 9999999999988755 311000 000000 0
Q ss_pred -hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccC-ChHHHHHHHHHH
Q psy13014 62 -QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLE-KPDQSILACSKA 139 (229)
Q Consensus 62 -~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~A~~~~~~a 139 (229)
........+|...+......+..+.|...|.++ . .|.. . ..+|...|.. .+..+ +.+.|...|+.+
T Consensus 279 ~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~-~~~~-~---~~v~i~~A~l------E~~~~~d~~~ar~ife~a 346 (493)
T 2uy1_A 279 KVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-G-NEGV-G---PHVFIYCAFI------EYYATGSRATPYNIFSSG 346 (493)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-T-TSCC-C---HHHHHHHHHH------HHHHHCCSHHHHHHHHHH
T ss_pred hhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-h-CCCC-C---hHHHHHHHHH------HHHHCCChHHHHHHHHHH
Confidence 012233466778888887889999999999999 4 4432 1 6677766766 55555 699999999999
Q ss_pred HhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccC
Q psy13014 140 ITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVS 190 (229)
Q Consensus 140 l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 190 (229)
++..|+++..+...+......|+.+.|...|+++ +.....|......
T Consensus 347 l~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~f 393 (493)
T 2uy1_A 347 LLKHPDSTLLKEEFFLFLLRIGDEENARALFKRL----EKTSRMWDSMIEY 393 (493)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 9999999988888888888999999999999887 3345555554444
No 221
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.22 E-value=5.9e-06 Score=56.25 Aligned_cols=83 Identities=7% Similarity=0.029 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHccCHHH---HHHHHHHHHHhC-CCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHH
Q psy13014 65 EQTAISLKDEGNALFRLNQWSE---SLAKYNEALRSC-PRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAI 140 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~---A~~~~~~al~~~-p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al 140 (229)
+....+.+.+|.++...++..+ ++..++..++.. |. .+-++.+.+|.. ++++|+|++|..+++.++
T Consensus 32 ~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~----~~Rd~lY~LAvg------~yklg~Y~~A~~~~~~lL 101 (126)
T 1nzn_A 32 SVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKE----EQRDYVFYLAVG------NYRLKEYEKALKYVRGLL 101 (126)
T ss_dssp CCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHH----HHHHHHHHHHHH------HHHTTCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcc----hHHHHHHHHHHH------HHHhhhHHHHHHHHHHHH
Confidence 4567889999999999888777 999999988875 41 238899999999 999999999999999999
Q ss_pred hcCCCcHHHHHHHHHHH
Q psy13014 141 TLNPSYLKVYQRRARLY 157 (229)
Q Consensus 141 ~~~p~~~~~~~~la~~~ 157 (229)
++.|+|..+......+-
T Consensus 102 ~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 102 QTEPQNNQAKELERLID 118 (126)
T ss_dssp HHCTTCHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHH
Confidence 99999988776665443
No 222
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.02 E-value=0.00017 Score=49.87 Aligned_cols=79 Identities=8% Similarity=-0.079 Sum_probs=70.0
Q ss_pred HHHHHhHhhhhhhhHHhhccCCh---HHHHHHHHHHHhcCCC-cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHH
Q psy13014 107 AVFYANRSAALEKLASYLSLEKP---DQSILACSKAITLNPS-YLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRD 182 (229)
Q Consensus 107 ~~~~~~lg~~~~~~~~~~~~~~~---~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 182 (229)
..+.++.|.+ +.+..+. .++|..++..+...|. .-+.+|.+|..++++|+|++|..+.+.+++.+|++..
T Consensus 39 ~~t~F~YAw~------Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~Q 112 (144)
T 1y8m_A 39 IQSRFNYAWG------LIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 112 (144)
T ss_dssp HHHHHHHHHH------HHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHH
T ss_pred HHHHHHHHHH------HHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHH
Confidence 8899999999 8877754 4789999999998884 5678999999999999999999999999999999999
Q ss_pred HHHHhccCc
Q psy13014 183 AYVATKVSP 191 (229)
Q Consensus 183 ~~~~l~~~~ 191 (229)
+......+.
T Consensus 113 A~~Lk~~Ie 121 (144)
T 1y8m_A 113 VGALKSMVE 121 (144)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 987766665
No 223
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.01 E-value=3e-05 Score=55.12 Aligned_cols=119 Identities=9% Similarity=0.001 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCC----chhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSC----SVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
..-++++.....++..+.|+.|+.....++.+..++. ......+...+|.+ ++..++|.+|...|++++.
T Consensus 18 ~~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~lada------lf~~~eyrrA~~~y~qALq 91 (167)
T 3ffl_A 18 GSHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADS------LFHDKEYRNAVSKYTMALQ 91 (167)
T ss_dssp ---CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHH------HHcccHHHHHHHHHHHHHH
Confidence 3456788888999999999999999999877743321 23456789999999 9999999999999999875
Q ss_pred cC------C-------------------CcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCc
Q psy13014 142 LN------P-------------------SYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSP 191 (229)
Q Consensus 142 ~~------p-------------------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 191 (229)
.. + .+.+.-+.+|.|+.+++++++|+..++..-.. -..+.....||.++
T Consensus 92 ~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k-~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 92 QKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSR-QRTPKINMLLANLY 165 (167)
T ss_dssp HHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGG-GCCHHHHHHHHHHC
T ss_pred HHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCch-hcCHHHHHHHHHHh
Confidence 42 1 11367889999999999999999998754222 23455555555554
No 224
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.97 E-value=6.9e-05 Score=51.21 Aligned_cols=79 Identities=8% Similarity=-0.079 Sum_probs=69.8
Q ss_pred HHHHHhHhhhhhhhHHhhccCCh---HHHHHHHHHHHhcCCC-cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHH
Q psy13014 107 AVFYANRSAALEKLASYLSLEKP---DQSILACSKAITLNPS-YLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRD 182 (229)
Q Consensus 107 ~~~~~~lg~~~~~~~~~~~~~~~---~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 182 (229)
+.+.++.|.+ +.+..+. .++|..++..++.+|. .-+.++.+|..+.++|+|++|..+.+.+++++|++..
T Consensus 40 ~qt~F~yAw~------Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~Q 113 (134)
T 3o48_A 40 IQSRFNYAWG------LIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 113 (134)
T ss_dssp HHHHHHHHHH------HHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHH
T ss_pred hhhHHHHHHH------HHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHH
Confidence 8889999999 8777654 5789999999998884 4779999999999999999999999999999999999
Q ss_pred HHHHhccCc
Q psy13014 183 AYVATKVSP 191 (229)
Q Consensus 183 ~~~~l~~~~ 191 (229)
+......+.
T Consensus 114 A~~Lk~~Ie 122 (134)
T 3o48_A 114 VGALKSMVE 122 (134)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 987776665
No 225
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.91 E-value=0.00034 Score=48.43 Aligned_cols=83 Identities=7% Similarity=-0.052 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHccCH---HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 65 EQTAISLKDEGNALFRLNQW---SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~---~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
...+.+.+++|.++....+. .+++..++..++..|.. +-++.+.+|.. ++++|+|++|..+++.+++
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~----~RdcLYyLAvg------~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR----RRECLYYLTIG------CYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST----HHHHHHHHHHH------HHTTTCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc----hhHHHHHHHHH------HHHhhhHHHHHHHHHHHHh
Confidence 34567788899999887764 57999999999988864 48899999999 9999999999999999999
Q ss_pred cCCCcHHHHHHHHHHH
Q psy13014 142 LNPSYLKVYQRRARLY 157 (229)
Q Consensus 142 ~~p~~~~~~~~la~~~ 157 (229)
+.|+|..+......+-
T Consensus 106 ~eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 106 HERNNKQVGALKSMVE 121 (144)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHH
Confidence 9999988766555443
No 226
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.91 E-value=0.00018 Score=49.11 Aligned_cols=84 Identities=7% Similarity=-0.041 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHccCH---HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 66 QTAISLKDEGNALFRLNQW---SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~---~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
-.+.+.+++|.++....+. .+++..++..++..|.. +-+.++.+|.. ++++|+|++|..+++.++++
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~----~Rd~LYyLAvg------~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR----RRECLYYLTIG------CYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG----HHHHHHHHHHH------HHHHTCHHHHHHHHHHHHTT
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch----hHHHHHHHHHH------HHHhhhHHHHHHHHHHHHhh
Confidence 3456788888888887654 57999999999988743 48899999999 99999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHh
Q psy13014 143 NPSYLKVYQRRARLYQQ 159 (229)
Q Consensus 143 ~p~~~~~~~~la~~~~~ 159 (229)
.|+|..+......+-.+
T Consensus 108 eP~N~QA~~Lk~~Ie~k 124 (134)
T 3o48_A 108 ERNNKQVGALKSMVEDK 124 (134)
T ss_dssp CTTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH
Confidence 99998877666555443
No 227
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.85 E-value=0.00015 Score=61.43 Aligned_cols=138 Identities=7% Similarity=-0.074 Sum_probs=95.8
Q ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhh------h----------------
Q psy13014 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALE------K---------------- 119 (229)
Q Consensus 62 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~------~---------------- 119 (229)
...|..+..|...+..+...|+.++|...|++++.. |.+ ..+|...+...+ +
T Consensus 207 ~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~-----~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~ 280 (493)
T 2uy1_A 207 DSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDG-----MFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKV 280 (493)
T ss_dssp HHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCS-----SHHHHHHHHHTTCTHHHHHHHHHTC----------
T ss_pred HcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCc-----HHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhh
Confidence 445667889999999999999999999999999999 987 333332222100 0
Q ss_pred -----------hHH-hhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHhCCCcHHHHHH
Q psy13014 120 -----------LAS-YLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSD-KLDEALADYQKILELDPNNRDAYVA 186 (229)
Q Consensus 120 -----------~~~-~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~ 186 (229)
-.. ..+.+..+.|...|.+| ...+.....|...|.+....+ +.+.|...|+.+++..|+++..+..
T Consensus 281 ~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~ 359 (493)
T 2uy1_A 281 FSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEE 359 (493)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHH
Confidence 000 23456788999999999 433335667777777777667 5999999999999999998887666
Q ss_pred hccCchHHHhhhhhccccccc
Q psy13014 187 TKVSPDLKLKEKNGATKLSPD 207 (229)
Q Consensus 187 l~~~~~~~~~~~~~a~~~~~~ 207 (229)
.+... ...++...+...|.+
T Consensus 360 yid~e-~~~~~~~~aR~l~er 379 (493)
T 2uy1_A 360 FFLFL-LRIGDEENARALFKR 379 (493)
T ss_dssp HHHHH-HHHTCHHHHHHHHHH
T ss_pred HHHHH-HHcCCHHHHHHHHHH
Confidence 55543 444544444443333
No 228
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.85 E-value=0.00065 Score=47.44 Aligned_cols=117 Identities=11% Similarity=-0.097 Sum_probs=81.3
Q ss_pred ccCCchHHHHHHHHHHHHHhhhhh------hhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCH
Q psy13014 11 SKNPSFLYTIYFSCFILFILFSEI------RTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQW 84 (229)
Q Consensus 11 ~~~p~~~~~~~~~~~~~~~~~~~~------~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (229)
-+.|+++..++.....+-.. |+. +.-.+.|++++..++.- ........+..|...+.. ...++.
T Consensus 7 ~~~p~~yd~W~~yl~llE~~-g~p~~d~~l~rlrd~YerAia~~Pp~--------k~~~wrrYI~LWIrYA~~-~ei~D~ 76 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKN-SVPLSDALLNKLIGRYSQAIEALPPD--------KYGQNESFARIQVRFAEL-KAIQEP 76 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHH-TCSCCHHHHHHHHHHHHHHHHHSCGG--------GGTTCHHHHHHHHHHHHH-HHHHCG
T ss_pred eeCCCCHHHHHHHHHHHHHc-CCCchhhHHHHHHHHHHHHHHcCCcc--------ccccHHHHHHHHHHHHHH-HHhcCH
Confidence 36799999999988877777 777 55556666665433311 123445666777777755 456888
Q ss_pred HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH
Q psy13014 85 SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 148 (229)
++|...|+.++.+.... +.+|...|.. -.++|+..+|...+.+++.+.|....
T Consensus 77 d~aR~vy~~a~~~hKkF-----AKiwi~~AqF------EiRqgnl~kARkILg~AiG~~~k~~~ 129 (161)
T 4h7y_A 77 DDARDYFQMARANCKKF-----AFVHISFAQF------ELSQGNVKKSKQLLQKAVERGAVPLE 129 (161)
T ss_dssp GGCHHHHHHHHHHCTTB-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHTTCBCHH
T ss_pred HHHHHHHHHHHHHhHHH-----HHHHHHHHHH------HHHcccHHHHHHHHHHHhccCCCcHH
Confidence 88888888888875554 7777777777 77888888888888888888776544
No 229
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.69 E-value=0.00048 Score=48.11 Aligned_cols=115 Identities=11% Similarity=0.026 Sum_probs=91.3
Q ss_pred hHHHHHHHHHHHHHHHHHccCH------HHHHHHHHHHHHhCCCCCchh-h--HHHHHhHhhhhhhhHHhhccCChHHHH
Q psy13014 63 KLEQTAISLKDEGNALFRLNQW------SESLAKYNEALRSCPRSCSVS-R--AVFYANRSAALEKLASYLSLEKPDQSI 133 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~------~~A~~~~~~al~~~p~~~~~~-~--~~~~~~lg~~~~~~~~~~~~~~~~~A~ 133 (229)
..|++++.|.......-..|+. ++-++.|++|+..-|...... + ..+|...| . +...++.++|.
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA-~------~~ei~D~d~aR 80 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFA-E------LKAIQEPDDAR 80 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHH-H------HHHHHCGGGCH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHH-H------HHHhcCHHHHH
Confidence 4467777888888888777888 888999999999887642111 2 23344444 2 55669999999
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHH
Q psy13014 134 LACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184 (229)
Q Consensus 134 ~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 184 (229)
+.|+.++.+...-+..|...|.--...|+...|.+.+.+++.+.|...+..
T Consensus 81 ~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 81 DYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH
Confidence 999999998888899999999999999999999999999999999876654
No 230
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.61 E-value=0.00068 Score=48.20 Aligned_cols=87 Identities=20% Similarity=0.203 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC---CCC-----------------chhhHHHHHhHhhhhhhhHHh
Q psy13014 64 LEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCP---RSC-----------------SVSRAVFYANRSAALEKLASY 123 (229)
Q Consensus 64 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p---~~~-----------------~~~~~~~~~~lg~~~~~~~~~ 123 (229)
......++..+|..++..++|.+|...|++++.... ... .....++.+.++.| +
T Consensus 59 p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C------~ 132 (167)
T 3ffl_A 59 PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAEC------Y 132 (167)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHH------H
Confidence 345677999999999999999999999999977621 110 00123788999999 9
Q ss_pred hccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Q psy13014 124 LSLEKPDQSILACSKAITLNPSYLKVYQRRARLY 157 (229)
Q Consensus 124 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 157 (229)
..++++++|+..++. |-.....++....+|..|
T Consensus 133 ~~l~~~~~Ai~~Le~-Ip~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 133 TVLKQDKDAIAILDG-IPSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHTTCHHHHHHHHHT-SCGGGCCHHHHHHHHHHC
T ss_pred HHHCCHHHHHHHHhc-CCchhcCHHHHHHHHHHh
Confidence 999999999999874 333445677777777665
No 231
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.37 E-value=0.0036 Score=53.02 Aligned_cols=157 Identities=7% Similarity=0.013 Sum_probs=109.6
Q ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH---------ccCHHHHHHHHHHHH
Q psy13014 25 FILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFR---------LNQWSESLAKYNEAL 95 (229)
Q Consensus 25 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~A~~~~~~al 95 (229)
..+... |+.++|...|++.... ...-+...+..+-.++.. .+..++|.+.|++..
T Consensus 34 d~c~k~-G~~~~A~~lf~~M~~~---------------Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~ 97 (501)
T 4g26_A 34 DMCSKK-GDVLEALRLYDEARRN---------------GVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMI 97 (501)
T ss_dssp HHTTTS-CCHHHHHHHHHHHHHH---------------TCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhC-CCHHHHHHHHHHHHHc---------------CCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHH
Confidence 345566 9999999999776521 111122333333334433 234788999998877
Q ss_pred HhCC-CCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHhcccHHHHHHHHHHH
Q psy13014 96 RSCP-RSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN-PSYLKVYQRRARLYQQSDKLDEALADYQKI 173 (229)
Q Consensus 96 ~~~p-~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 173 (229)
...- .+ ...|..+-.. +.+.|+.++|...+++..+.. ..+..+|..+-..+...|+.++|.+.|+..
T Consensus 98 ~~G~~Pd-----~~tyn~lI~~------~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 98 VDKVVPN-----EATFTNGARL------AVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HTTCCCC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhCCCCC-----HHHHHHHHHH------HHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHH
Confidence 6532 23 7788888888 999999999999999887753 336778888889999999999999999998
Q ss_pred HHhCCC-cHHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 174 LELDPN-NRDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 174 l~~~p~-~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
.+..-. +...+..+-..+ -+.++..+|.+.+.++-
T Consensus 167 ~~~G~~Pd~~ty~~Li~~~-~~~g~~d~A~~ll~~Mr 202 (501)
T 4g26_A 167 VESEVVPEEPELAALLKVS-MDTKNADKVYKTLQRLR 202 (501)
T ss_dssp HHTTCCCCHHHHHHHHHHH-HHTTCHHHHHHHHHHHH
T ss_pred HhcCCCCCHHHHHHHHHHH-hhCCCHHHHHHHHHHHH
Confidence 765322 344555665566 66777777777666653
No 232
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.01 E-value=0.03 Score=45.69 Aligned_cols=104 Identities=13% Similarity=0.175 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCc-----------------hhhHHHHHhHhhhhhhhHHhhccCC
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCS-----------------VSRAVFYANRSAALEKLASYLSLEK 128 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-----------------~~~~~~~~~lg~~~~~~~~~~~~~~ 128 (229)
.....+...|......++...|...+.+++.+.....- ..+..+...++.. +...|+
T Consensus 113 ~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~------~l~~g~ 186 (388)
T 2ff4_A 113 GRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEA------EIACGR 186 (388)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHH------HHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH------HHHCCC
Confidence 33445555666666778999999999999998533211 0112233344444 788999
Q ss_pred hHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy13014 129 PDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILE 175 (229)
Q Consensus 129 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 175 (229)
+.+|+..+..++..+|-+..++..+-.++...|+..+|+..|+++..
T Consensus 187 ~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 187 ASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988754
No 233
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.01 E-value=0.021 Score=48.33 Aligned_cols=103 Identities=7% Similarity=0.050 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--CCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC-
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSC--PRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN- 143 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~- 143 (229)
+...+..+-..+.+.|++++|...|++..... |+ ...|..+-.. +.+.|+.++|.+.+++..+..
T Consensus 104 d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd------~~tyn~lI~~------~~~~g~~~~A~~l~~~M~~~G~ 171 (501)
T 4g26_A 104 NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR------LRSYGPALFG------FCRKGDADKAYEVDAHMVESEV 171 (501)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC------HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc------cceehHHHHH------HHHCCCHHHHHHHHHHHHhcCC
Confidence 45577888889999999999999999987753 43 7788888888 889999999999999988764
Q ss_pred CCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHh--CCCcH
Q psy13014 144 PSYLKVYQRRARLYQQSDKLDEALADYQKILEL--DPNNR 181 (229)
Q Consensus 144 p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--~p~~~ 181 (229)
..+..+|..+-.++.+.|+.++|.+.+++..+. .|+..
T Consensus 172 ~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~ 211 (501)
T 4g26_A 172 VPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKS 211 (501)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHH
T ss_pred CCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHH
Confidence 236778899999999999999999999998654 45433
No 234
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.012 Score=52.13 Aligned_cols=51 Identities=12% Similarity=0.143 Sum_probs=48.3
Q ss_pred hhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHH
Q psy13014 123 YLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKI 173 (229)
Q Consensus 123 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 173 (229)
+...|+|+-|+...++|+..-|....+|+.|+.+|..+|+|+.|+-.+..+
T Consensus 347 Ll~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 347 LLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 677899999999999999999999999999999999999999999888766
No 235
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.82 E-value=0.04 Score=39.38 Aligned_cols=105 Identities=10% Similarity=0.020 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh--c
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT--L 142 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~--~ 142 (229)
+..++.-..++..++-.|+|..|+-++. .+ +. ..+.+..+.| |.++++|.+|+..+++.++ +
T Consensus 30 ~~~~eY~lL~~I~LyyngEY~R~Lf~L~---~l--NT-----~Ts~YYk~LC------y~klKdYkkA~~~le~il~~kv 93 (242)
T 3kae_A 30 PCKPEYRMLMSIVLYLNGEYTRALFHLH---KL--NT-----CTSKYYESLC------YKKKKDYKKAIKSLESILEGKV 93 (242)
T ss_dssp ----CTHHHHHHHHHHTTCHHHHHHHHH---TC--CB-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHTTCS
T ss_pred cCChHHHhhhhhhhhhcchHhHHHHHHH---hc--ch-----HHHHHHHHHH------HHHHHHHHHHHHHHHHHHhccc
Confidence 4444666778889999999999987752 22 22 6777888899 9999999999999999983 2
Q ss_pred ---------------CCCcHHH-HHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHH
Q psy13014 143 ---------------NPSYLKV-YQRRARLYQQSDKLDEALADYQKILELDPNNRDAYV 185 (229)
Q Consensus 143 ---------------~p~~~~~-~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 185 (229)
+|.+-+. +..+|.++...|+-++|+.++......+|-.+..-.
T Consensus 94 d~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vEn 152 (242)
T 3kae_A 94 ERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVEN 152 (242)
T ss_dssp BCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred ccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHHH
Confidence 2444444 556799999999999999999999999998776653
No 236
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.77 E-value=0.0042 Score=52.39 Aligned_cols=77 Identities=13% Similarity=-0.003 Sum_probs=70.0
Q ss_pred HHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhc
Q psy13014 109 FYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATK 188 (229)
Q Consensus 109 ~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 188 (229)
+...+|.+ ......+..|..+|.+|+.+.|++...+..+|.+....|+.-+|+-+|.+++......+.+..++.
T Consensus 154 ~l~~LGDL------~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~ 227 (497)
T 1ya0_A 154 CLVHLGDI------ARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQ 227 (497)
T ss_dssp HHHHHHHH------HHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHH
T ss_pred HHHHcccH------HHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHH
Confidence 44556666 777788999999999999999999999999999999999999999999999999888999999999
Q ss_pred cCc
Q psy13014 189 VSP 191 (229)
Q Consensus 189 ~~~ 191 (229)
.++
T Consensus 228 ~~f 230 (497)
T 1ya0_A 228 KAL 230 (497)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 237
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.65 E-value=0.07 Score=47.27 Aligned_cols=64 Identities=14% Similarity=0.088 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHH
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKA 139 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~a 139 (229)
+.....+...+..+...|+|+-|+.+.++|+...|.. ...|+.|+.| |..+|+|+.|+-.++-+
T Consensus 334 ~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPse-----F~tW~~La~v------Yi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 334 NCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDS-----FESWYNLARC------HIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHS
T ss_pred CcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchh-----hHHHHHHHHH------HHHhccHHHHHHHHhcC
Confidence 3445678888999999999999999999999999999 9999999999 99999999999888765
No 238
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=96.62 E-value=0.11 Score=37.20 Aligned_cols=103 Identities=10% Similarity=0.029 Sum_probs=70.9
Q ss_pred CchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHH
Q psy13014 14 PSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNE 93 (229)
Q Consensus 14 p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ 93 (229)
|..++...+++++++.. |.+..+...+. .-+.....+-.+.|+...++|.+|+.+++.
T Consensus 30 ~~~~eY~lL~~I~Lyyn-gEY~R~Lf~L~---------------------~lNT~Ts~YYk~LCy~klKdYkkA~~~le~ 87 (242)
T 3kae_A 30 PCKPEYRMLMSIVLYLN-GEYTRALFHLH---------------------KLNTCTSKYYESLCYKKKKDYKKAIKSLES 87 (242)
T ss_dssp ----CTHHHHHHHHHHT-TCHHHHHHHHH---------------------TCCBHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCChHHHhhhhhhhhhc-chHhHHHHHHH---------------------hcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566677777777 77776655432 223455677788999999999999999999
Q ss_pred HHH--hC--CCCC---------chhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCC
Q psy13014 94 ALR--SC--PRSC---------SVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNP 144 (229)
Q Consensus 94 al~--~~--p~~~---------~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 144 (229)
.+. ++ |+-. ..+..-.+..+|.+ +.+.|+-++||.++.......|
T Consensus 88 il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~l------ltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 88 ILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDL------CTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp HHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHhcccccCcccccccceeeeccchHHHHHHHHHHH------HHHhcCHHHhhhHhhhhcCCcc
Confidence 993 32 2210 01234556778999 9999999999999988776554
No 239
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.53 E-value=0.02 Score=48.38 Aligned_cols=80 Identities=15% Similarity=0.102 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH
Q psy13014 69 ISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 69 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 148 (229)
..+..+|........+..|..+|.+|..+.|.+ ...++.+|.+ ....|+.-+|+-+|-+++......+.
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~-----G~~~nqLavl------a~~~~~~l~a~y~y~rsl~~~~Pf~~ 221 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSN-----GQPYNQLAIL------ASSKGDHLTTIFYYCRSIAVKFPFPA 221 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB-----SHHHHHHHHH------HHHTTCHHHHHHHHHHHHSSSBCCHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCC-----CchHHHHHHH------HhcccccHHHHHHHHHHHhcCCCChh
Confidence 467789999999999999999999999999999 9999999999 99999999999999999987766777
Q ss_pred HHHHHHHHHHh
Q psy13014 149 VYQRRARLYQQ 159 (229)
Q Consensus 149 ~~~~la~~~~~ 159 (229)
+.-++...+..
T Consensus 222 a~~nL~~~f~~ 232 (497)
T 1ya0_A 222 ASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777666653
No 240
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.46 E-value=0.28 Score=40.06 Aligned_cols=99 Identities=15% Similarity=0.045 Sum_probs=77.9
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCC-CCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC---CCcH
Q psy13014 72 KDEGNALFRLNQWSESLAKYNEALRSCPR-SCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN---PSYL 147 (229)
Q Consensus 72 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~---p~~~ 147 (229)
..+|..++..|+|.+|...+.+..+.... +......+++.....+ |..++++.++...+.++.... +.++
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~------~~~~~n~~k~k~~l~~a~~~~~ai~~~p 176 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKT------YHALSNLPKARAALTSARTTANAIYCPP 176 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHH------HHHhccHHHHHHHHHHHHhhhccCCCCH
Confidence 37899999999999999999988875332 2234467778888888 999999999999999886543 1222
Q ss_pred ----HHHHHHHHHHH-hcccHHHHHHHHHHHHHh
Q psy13014 148 ----KVYQRRARLYQ-QSDKLDEALADYQKILEL 176 (229)
Q Consensus 148 ----~~~~~la~~~~-~~~~~~~A~~~~~~al~~ 176 (229)
.....-|.++. ..++|.+|...|-.+++-
T Consensus 177 ~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 177 KVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 34555688999 899999999999998743
No 241
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.43 E-value=0.083 Score=40.59 Aligned_cols=66 Identities=15% Similarity=0.086 Sum_probs=60.5
Q ss_pred HHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHH
Q psy13014 121 ASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVA 186 (229)
Q Consensus 121 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 186 (229)
.+.++.|+.++|++.....++.+|.+...-..+-..+.-.|+++.|...++.+.+++|+....-..
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~ 70 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQ 70 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHH
Confidence 347889999999999999999999999999999999999999999999999999999998765433
No 242
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=95.38 E-value=1.1 Score=41.33 Aligned_cols=130 Identities=7% Similarity=-0.075 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHH-----hCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALR-----SCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~-----~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
....+..+-..+.+.|+.++|...|...-. ..|+ ...|..+-.. |.+.|+.++|.+.|++..+
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd------vvTYNtLI~G------lck~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT------LDMYNAVMLG------WARQGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC------HHHHHHHHHH------HHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC------HhHHHHHHHH------HHhCCCHHHHHHHHHHHHH
Confidence 345688888999999999999999976543 3454 7889999888 9999999999999999877
Q ss_pred cC-CCcHHHHHHHHHHHHhccc-HHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhccccccccc
Q psy13014 142 LN-PSYLKVYQRRARLYQQSDK-LDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDVF 209 (229)
Q Consensus 142 ~~-p~~~~~~~~la~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~~ 209 (229)
.. ..+..+|..+-.++.+.|+ .++|...|++..+..-.-....++ +.+.........++++....-+
T Consensus 194 ~G~~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~-~ll~~~eR~~vL~~Vrkv~P~f 262 (1134)
T 3spa_A 194 AGLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTA-VLLSEEDRATVLKAVHKVKPTF 262 (1134)
T ss_dssp TTCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHH-SCCCHHHHHHHHHHHGGGCCCC
T ss_pred cCCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhcc-cccChhhHHHHHHHHHHhCccc
Confidence 54 3367778888788899887 578899999988876443333333 2233233344555555554444
No 243
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.95 E-value=0.12 Score=43.60 Aligned_cols=111 Identities=13% Similarity=-0.034 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHH----------HHHHHHHHhCCCC-CchhhHHHHHhHhhhhhhhHHhhccCChHHHH
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESL----------AKYNEALRSCPRS-CSVSRAVFYANRSAALEKLASYLSLEKPDQSI 133 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~----------~~~~~al~~~p~~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~ 133 (229)
.-.+.+|+..+.++...|+..... ..+-.+++...-. .....+.++..+-.. |...+.|++|.
T Consensus 178 ~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~~~qa~l~nllLRn------YL~~~~y~qA~ 251 (523)
T 4b4t_S 178 LINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDNETKAMLINLILRD------FLNNGEVDSAS 251 (523)
T ss_dssp -------------------------CHHHHHHHHTHHHHHHHHCCSCSSSCHHHHHHHHHHHH------HHHSSCSTTHH
T ss_pred HHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccCcchhHHHHHHHHHH------HHccCcHHHHH
Confidence 335566777777777777665432 2333344432211 112246777777888 99999999999
Q ss_pred HHHHHHHhcCC--Cc---HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcH
Q psy13014 134 LACSKAITLNP--SY---LKVYQRRARLYQQSDKLDEALADYQKILELDPNNR 181 (229)
Q Consensus 134 ~~~~~al~~~p--~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 181 (229)
....++.-... .+ ...++.+|.++.-.++|.+|.+++..|+..-|.+.
T Consensus 252 ~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 252 DFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred HHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 99999853221 11 45677889999999999999999999999887654
No 244
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=94.87 E-value=0.71 Score=33.12 Aligned_cols=110 Identities=8% Similarity=-0.071 Sum_probs=65.5
Q ss_pred chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q psy13014 15 SFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEA 94 (229)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 94 (229)
+++...|-+++ .. |+++.|.+..+. .++...|..+|......|+++-|..+|.++
T Consensus 6 ~D~~~rF~LAL---~l-g~l~~A~e~a~~---------------------l~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 6 QDPHIRFDLAL---EY-GNLDAALDEAKK---------------------LNDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp SCHHHHHHHHH---HT-TCHHHHHHHHHH---------------------HCCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred CChHHHHHHHH---hc-CCHHHHHHHHHH---------------------hCCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 45566666654 45 777777765432 234567999999999999999999999775
Q ss_pred HHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHH
Q psy13014 95 LRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKI 173 (229)
Q Consensus 95 l~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 173 (229)
-.. ..+..+ |...|+-++-....+.+...+- +.....++..+|+++++++.|.+.
T Consensus 61 ~D~-------------~~L~~L------y~~tg~~e~L~kla~iA~~~g~-----~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 61 HSF-------------DKLSFL------YLVTGDVNKLSKMQNIAQTRED-----FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp TCH-------------HHHHHH------HHHHTCHHHHHHHHHHHHHTTC-----HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred CCH-------------HHHHHH------HHHhCCHHHHHHHHHHHHHCcc-----HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 332 222333 4445555554443333333222 122244556677777777776443
No 245
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.73 E-value=0.54 Score=36.13 Aligned_cols=61 Identities=18% Similarity=0.186 Sum_probs=46.4
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH
Q psy13014 77 ALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 77 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 148 (229)
..++.|+.++|++.....++.+|.+ +.....+-.. +.-.|++++|..-++-+.+++|....
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~d-----a~~R~~LfqL------Lcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKD-----ASLRSSFIEL------LCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTC-----HHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcC-----HHHHHHHHHH------HHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 3456778888888888888888887 7777777777 77778888888888877777776644
No 246
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.65 E-value=0.97 Score=37.50 Aligned_cols=105 Identities=14% Similarity=0.060 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-CCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh---
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRS-CPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT--- 141 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~--- 141 (229)
+.+.....++..+...|++.+|...+.....- ...........++.....+ +...+++.+|...++++..
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl------~l~~~d~~~a~~~~~ki~~~~~ 208 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMEL------SILKGDYSQATVLSRKILKKTF 208 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH------HHHCCCHHHHHHHHHHHHHhhc
Confidence 35667788999999999999999999887543 3333334457778888888 9999999999999998742
Q ss_pred cCCCcH----HHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy13014 142 LNPSYL----KVYQRRARLYQQSDKLDEALADYQKILEL 176 (229)
Q Consensus 142 ~~p~~~----~~~~~la~~~~~~~~~~~A~~~~~~al~~ 176 (229)
-.+.++ ..+...|.++...++|.+|-.+|..++..
T Consensus 209 ~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 209 KNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 223332 35666799999999999999999988754
No 247
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.54 E-value=0.17 Score=41.77 Aligned_cols=101 Identities=5% Similarity=-0.107 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC--CCcH
Q psy13014 70 SLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN--PSYL 147 (229)
Q Consensus 70 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~--p~~~ 147 (229)
++..+|..+...|++++|.++|.++........ ...+++..+..+ +...+++..+...+.++-... ..++
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~--~kid~~l~~irl------~l~~~d~~~~~~~~~ka~~~~~~~~d~ 204 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTG--AKIDVMLTIARL------GFFYNDQLYVKEKLEAVNSMIEKGGDW 204 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC--SHHHHHHHHHHH------HHHHTCHHHHHHHHHHHHHHHTTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH--HHHHHHHHHHHH------HHHhccHHHHHHHHHHHHHhhhcCCCH
Confidence 577899999999999999999999888654331 246778888888 888999999999999986542 2222
Q ss_pred ----HHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy13014 148 ----KVYQRRARLYQQSDKLDEALADYQKILELDP 178 (229)
Q Consensus 148 ----~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 178 (229)
......|.++...++|.+|...|..++....
T Consensus 205 ~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 205 ERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 2344568888889999999999988876543
No 248
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.43 E-value=0.42 Score=39.47 Aligned_cols=106 Identities=5% Similarity=-0.112 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 18 YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
.++..+|..+... |++..|...|.+..... .........+..+-.++...+++..+...+.++-..
T Consensus 132 ~~~~~la~~~~~~-Gd~~~A~~~~~~~~~~~-------------~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 132 QAWINLGEYYAQI-GDKDNAEKTLGKSLSKA-------------ISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SCCHHHHHHHHHH-CCCTTHHHHHHHHHHHH-------------TCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHhc-------------CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 3677889999999 99999999998765221 123456778888899999999999999999999776
Q ss_pred CCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC
Q psy13014 98 CPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN 143 (229)
Q Consensus 98 ~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 143 (229)
.....+ .....+....|.. +...++|..|...|-.++...
T Consensus 198 ~~~~~d~~~~~~lk~~~gl~------~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 198 IEKGGDWERRNRYKTYYGIH------CLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp HTTCCCTHHHHHHHHHHHHG------GGGTSCHHHHHHHHHHHHHHS
T ss_pred hhcCCCHHHHHHHHHHHHHH------HHHhChHHHHHHHHHHHhccC
Confidence 433322 2234556667778 889999999999998887654
No 249
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=93.87 E-value=0.41 Score=39.05 Aligned_cols=124 Identities=7% Similarity=-0.107 Sum_probs=84.0
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-
Q psy13014 22 FSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPR- 100 (229)
Q Consensus 22 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~- 100 (229)
.+|.+++.. |++.+|...+.+...... .........+++......+...+++.++...+.++......
T Consensus 104 kL~~l~~~~-~~y~~a~~~i~~l~~~~~----------~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai 172 (394)
T 3txn_A 104 RLIALYFDT-ALYTEALALGAQLLRELK----------KLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAI 172 (394)
T ss_dssp HHHHHHHHT-TCHHHHHHHHHHHHHHHT----------TSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHh-hhHHHHHHHHHHHHHHHh----------ccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccC
Confidence 567778888 888888877766553221 11235677788889999999999999999999999776311
Q ss_pred CCc-hhhHHHHHhHhhhhhhhHHhh-ccCChHHHHHHHHHHHhcCCC--c---HHHHHHHHHHHHhccc
Q psy13014 101 SCS-VSRAVFYANRSAALEKLASYL-SLEKPDQSILACSKAITLNPS--Y---LKVYQRRARLYQQSDK 162 (229)
Q Consensus 101 ~~~-~~~~~~~~~lg~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~--~---~~~~~~la~~~~~~~~ 162 (229)
.++ ...+.+...-|.. ++ ..++|..|...|-++++-... + ..+...++.|-.-.++
T Consensus 173 ~~~p~i~a~i~~~~Gi~------~l~~~rdyk~A~~~F~eaf~~f~~~~~~~~~~~lkYlvL~aLl~~~ 235 (394)
T 3txn_A 173 YCPPKVQGALDLQSGIL------HAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQ 235 (394)
T ss_dssp CCCHHHHHHHHHHHHHH------HHHTTSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHhhHH------HHHhccCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHcCC
Confidence 011 1235556666778 88 899999999999888753321 1 2234445555555444
No 250
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.60 E-value=0.39 Score=39.10 Aligned_cols=65 Identities=12% Similarity=0.150 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
....+...++..+...|++.+++..+..++..+|-+ -.+|..+-.+ +...|+..+|++.|+++..
T Consensus 169 ~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~-----E~~~~~lm~a------l~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 169 DKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYR-----EPLWTQLITA------YYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-----HHHHHHHHHH------HHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHH------HHHcCCHHHHHHHHHHHHH
Confidence 344566778888999999999999999999999998 8899999999 9999999999999988644
No 251
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.58 E-value=0.2 Score=42.26 Aligned_cols=74 Identities=12% Similarity=-0.012 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC--CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRS--CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~--~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
...+..+..+-..|...+.|++|.....++. .|.. ........++.+|.+ +.-.++|.+|.+++..|+..
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI------~a~q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKI------NAIQLDYSTANEYIIAAIRK 299 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHTSS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHH------HHHhccHHHHHHHHHHHHHh
Confidence 3556778888889999999999999999885 5543 223346778889999 99999999999999999988
Q ss_pred CCCc
Q psy13014 143 NPSY 146 (229)
Q Consensus 143 ~p~~ 146 (229)
.|.+
T Consensus 300 ap~~ 303 (523)
T 4b4t_S 300 APHN 303 (523)
T ss_dssp CSCS
T ss_pred CCcc
Confidence 7754
No 252
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.18 E-value=0.96 Score=39.86 Aligned_cols=92 Identities=12% Similarity=0.019 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHH
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRS--------CPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSK 138 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~ 138 (229)
+...|..+|..+.+.++++.|+.+|.++-.. ...+ ......++.. ....|++..|...|.+
T Consensus 680 ~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~-----~~~~~~~~~~------a~~~~~~~~A~~~~~~ 748 (814)
T 3mkq_A 680 AEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNN-----KEGLVTLAKD------AETTGKFNLAFNAYWI 748 (814)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTC-----HHHHHHHHHH------HHHTTCHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCC-----HHHHHHHHHH------HHHcCchHHHHHHHHH
Confidence 4578999999999999999999999876221 1222 3344445555 5556666666555443
Q ss_pred HHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCc
Q psy13014 139 AITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNN 180 (229)
Q Consensus 139 al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 180 (229)
. .+ +-..-.+|...+++++|+...+ ...|..
T Consensus 749 ~-----g~---~~~a~~~~~~~~~~~~A~~lA~---~~~~~~ 779 (814)
T 3mkq_A 749 A-----GD---IQGAKDLLIKSQRFSEAAFLGS---TYGLGD 779 (814)
T ss_dssp H-----TC---HHHHHHHHHHTTCHHHHHHHHH---HTTCCH
T ss_pred c-----CC---HHHHHHHHHHcCChHHHHHHHH---HhCCCh
Confidence 2 11 1123344666667776665543 344444
No 253
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.66 E-value=1.4 Score=38.73 Aligned_cols=48 Identities=13% Similarity=0.022 Sum_probs=38.7
Q ss_pred HHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHH
Q psy13014 76 NALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKA 139 (229)
Q Consensus 76 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~a 139 (229)
......|+++.|.+..+ ..++ ...|..+|.. +.+.++++.|+.+|.++
T Consensus 660 ~~~l~~~~~~~A~~~~~-----~~~~-----~~~W~~la~~------al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 660 ELALKVGQLTLARDLLT-----DESA-----EMKWRALGDA------SLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHTCHHHHHHHHT-----TCCC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHH
T ss_pred ehhhhcCCHHHHHHHHH-----hhCc-----HhHHHHHHHH------HHHcCCHHHHHHHHHHc
Confidence 34567899999888753 2244 8899999999 99999999999999875
No 254
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=91.82 E-value=2.2 Score=37.01 Aligned_cols=95 Identities=9% Similarity=-0.069 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHH
Q psy13014 69 ISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLK 148 (229)
Q Consensus 69 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 148 (229)
.....++......+...++...+.+......+ ......++.. .+..|+++.|..++...-........
T Consensus 253 ~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~e~~~r~------Alr~~d~~~a~~~~~~l~~~~~~~~r 320 (618)
T 1qsa_A 253 ELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQS------TSLIERRVRM------ALGTGDRRGLNTWLARLPMEAKEKDE 320 (618)
T ss_dssp HHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCC------HHHHHHHHHH------HHHHTCHHHHHHHHHHSCTTGGGSHH
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHhccccCCC------hHHHHHHHHH------HHHCCCHHHHHHHHHHccccccccHh
Confidence 34444555555555455666677766554333 2233334334 44669999999999875554345688
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy13014 149 VYQRRARLYQQSDKLDEALADYQKILE 175 (229)
Q Consensus 149 ~~~~la~~~~~~~~~~~A~~~~~~al~ 175 (229)
..|-+|.++..+|+.++|...|+++..
T Consensus 321 ~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 321 WRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 899999999999999999999999875
No 255
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.78 E-value=0.63 Score=43.43 Aligned_cols=117 Identities=11% Similarity=-0.032 Sum_probs=80.1
Q ss_pred cCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH----------HHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHc
Q psy13014 12 KNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQ----------FIFHVLFYLFCSQKLEQTAISLKDEGNALFRL 81 (229)
Q Consensus 12 ~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 81 (229)
.-|.++...|.+|.+++.. |++++|..+|.++...+. ......... ......+..|......+.+.
T Consensus 837 ~~~~~~~~~yl~g~~~L~~-ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~---~~~~~l~~YY~hv~~LFe~~ 912 (1139)
T 4fhn_B 837 WLNSDPIAVYLKALIYLKS-KEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY---HHQNLLSCYYLHLSKKLFEE 912 (1139)
T ss_dssp HSCCCHHHHHHHHHHHHHT-TCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTT---TSCCSSHHHHHHHHHHHHHT
T ss_pred hccCCcHHHHHHHHHHHhc-CCHHHHHHHHHHHhhhhcccchhhhhhcccccccccc---cccccHHHHHHHHHHHHHHc
Confidence 4567777889999999999 999999999987642110 000000000 00111234677777888889
Q ss_pred cCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHH
Q psy13014 82 NQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSK 138 (229)
Q Consensus 82 ~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~ 138 (229)
+.++.+++....|+...+..........|.++=.. +..+|+|++|...+..
T Consensus 913 ~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~------~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 913 SAYIDALEFSLLADASKETDDEDLSIAITHETLKT------ACAAGKFDAAHVALMV 963 (1139)
T ss_dssp SCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHH------HHHHCCSGGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHH------HHhhCCHHHHHHHHHh
Confidence 99999999999999987654322234467777777 8889999999777643
No 256
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.58 E-value=0.21 Score=46.55 Aligned_cols=100 Identities=7% Similarity=-0.011 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCC--C---------------chhhHHHHHhHhhhhhhhHHhhccCC
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSC-PRS--C---------------SVSRAVFYANRSAALEKLASYLSLEK 128 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~--~---------------~~~~~~~~~~lg~~~~~~~~~~~~~~ 128 (229)
++...+.+|.+++..|++++|..+|+++-..- ... . ....+..|..+..+ +.+.+.
T Consensus 841 ~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~L------Fe~~~~ 914 (1139)
T 4fhn_B 841 DPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKK------LFEESA 914 (1139)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHH------HHHTSC
T ss_pred CcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHH------HHHcCC
Confidence 34455889999999999999999998873221 100 0 01124567777778 889999
Q ss_pred hHHHHHHHHHHHhcCCC-cH----HHHHHHHHHHHhcccHHHHHHHHHH
Q psy13014 129 PDQSILACSKAITLNPS-YL----KVYQRRARLYQQSDKLDEALADYQK 172 (229)
Q Consensus 129 ~~~A~~~~~~al~~~p~-~~----~~~~~la~~~~~~~~~~~A~~~~~~ 172 (229)
++.+++....|++..+. +. ..|.++=..+..+|+|++|...+..
T Consensus 915 ~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 915 YIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp CHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 99999999999987643 32 2577777888899999999777644
No 257
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=90.02 E-value=2.7 Score=30.10 Aligned_cols=78 Identities=5% Similarity=0.102 Sum_probs=57.5
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC--------CCcHH
Q psy13014 77 ALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN--------PSYLK 148 (229)
Q Consensus 77 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~--------p~~~~ 148 (229)
...+.|+++.|.+..+.. ++ ...|..+|.. .+..|+++-|+.+|.++-... -.+..
T Consensus 14 LAL~lg~l~~A~e~a~~l-----~~-----~~~Wk~Lg~~------AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e 77 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL-----ND-----SITWERLIQE------ALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVN 77 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH-----CC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHH
T ss_pred HHHhcCCHHHHHHHHHHh-----CC-----HHHHHHHHHH------HHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHH
Confidence 446789999999987654 44 8899999999 999999999999998753321 22334
Q ss_pred HHHHHHHHHHhcccHHHHHHHH
Q psy13014 149 VYQRRARLYQQSDKLDEALADY 170 (229)
Q Consensus 149 ~~~~la~~~~~~~~~~~A~~~~ 170 (229)
-+..++.+-...|++.-|...+
T Consensus 78 ~L~kla~iA~~~g~~n~af~~~ 99 (177)
T 3mkq_B 78 KLSKMQNIAQTREDFGSMLLNT 99 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHCccHHHHHHHH
Confidence 4556666777777777766554
No 258
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.41 E-value=11 Score=31.07 Aligned_cols=108 Identities=6% Similarity=-0.081 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH-
Q psy13014 18 YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALR- 96 (229)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~- 96 (229)
.....++.++... |++.+|...+.....- .............+......+...+++.+|...+.++-.
T Consensus 138 rl~~~La~i~e~~-g~~~eA~~iL~~l~~E----------t~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~ 206 (445)
T 4b4t_P 138 RVTKDLVEIKKEE-GKIDEAADILCELQVE----------TYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKK 206 (445)
T ss_dssp HHHHHHHHHHHHH-TCHHHHHHHHHHHHHH----------HCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-cCHHHHHHHHHHHHHH----------HHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3456678888888 9999998877655411 011124456778899999999999999999999998743
Q ss_pred hCCCCCc-hhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 97 SCPRSCS-VSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 97 ~~p~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
..+..+. ......+...|.. +...++|.+|-.+|..+...
T Consensus 207 ~~~~~~~~~lk~~~~~~~~~~------~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 207 TFKNPKYESLKLEYYNLLVKI------SLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHSSCCHHHHHHHHHHHHHH------HHHHCCHHHHHHHHHHHHHH
T ss_pred hcccCCcHHHHHHHHHHHHHH------HHHhhhHHHHHHHHHHHHhc
Confidence 2222111 2245667778888 99999999999999888764
No 259
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=86.78 E-value=2.4 Score=25.50 Aligned_cols=31 Identities=13% Similarity=0.331 Sum_probs=28.3
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q psy13014 71 LKDEGNALFRLNQWSESLAKYNEALRSCPRS 101 (229)
Q Consensus 71 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 101 (229)
-..+|..+...|++++|+.+|-+|+...|..
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 3478999999999999999999999999986
No 260
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=84.91 E-value=15 Score=34.06 Aligned_cols=100 Identities=8% Similarity=-0.094 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Q psy13014 19 TIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSC 98 (229)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~ 98 (229)
++..+-..+... |++++|...|........ ....-+...|..+-..+.+.|+.++|.+.|++.....
T Consensus 129 TynaLIdglcK~-G~leeA~~Lf~eM~~m~~------------kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G 195 (1134)
T 3spa_A 129 RLLAFFKCCLLT-DQLPLAHHLLVVHHGQRQ------------KRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAG 195 (1134)
T ss_dssp HHHHHHHHHHHH-TCHHHHHHHHHHHHHSHH------------HHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC-CCHHHHHHHHHHHHHHhh------------cCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcC
Confidence 444555567777 999999988865431100 1122356688889999999999999999999988763
Q ss_pred --CCCCchhhHHHHHhHhhhhhhhHHhhccCCh-HHHHHHHHHHHhcC
Q psy13014 99 --PRSCSVSRAVFYANRSAALEKLASYLSLEKP-DQSILACSKAITLN 143 (229)
Q Consensus 99 --p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~-~~A~~~~~~al~~~ 143 (229)
|+ ...|..+-.+ +.+.|+. +.|...+++.....
T Consensus 196 ~~PD------vvTYntLI~g------lcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 196 LTPD------LLSYAAALQC------MGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp CCCC------HHHHHHHHHH------HHHHTCCHHHHHHHHHHHHHHT
T ss_pred CCCc------HHHHHHHHHH------HHhCCCcHHHHHHHHHHHHHcC
Confidence 43 7778888778 8888885 78889999887764
No 261
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=82.03 E-value=8.1 Score=28.18 Aligned_cols=53 Identities=11% Similarity=0.065 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhh
Q psy13014 64 LEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAA 116 (229)
Q Consensus 64 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~ 116 (229)
..+.....+-+|..+...++|.+|.+.+..|++..|......+..+...+--+
T Consensus 10 ~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~ 62 (203)
T 3t5x_A 10 TAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPV 62 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHH
Confidence 34667788999999999999999999999999998876443344444444333
No 262
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=81.21 E-value=8.1 Score=33.48 Aligned_cols=128 Identities=6% Similarity=-0.130 Sum_probs=79.9
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcHHHHH
Q psy13014 72 KDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQ 151 (229)
Q Consensus 72 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 151 (229)
...+.......+.+.|...+........-+ .......+..+|.- ....+...++...+.+.....+++...-.
T Consensus 218 ~~~~~~rlar~d~~~A~~~~~~~~~~~~~~-~~~~~~~~~~ia~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 290 (618)
T 1qsa_A 218 AAVAFASVARQDAENARLMIPSLAQAQQLN-EDQIQELRDIVAWR------LMGNDVTDEQAKWRDDAIMRSQSTSLIER 290 (618)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHT------SCSTTCCHHHHHHHHHHHHTCCCHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHhhhhccCCC-HHHHHHHHHHHHHH------HHHcCCChHHHHHHHhccccCCChHHHHH
Confidence 344555556668889999888776543332 22234455555655 55566567888888887665554444333
Q ss_pred HHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhhhhhcccccccc
Q psy13014 152 RRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKEKNGATKLSPDV 208 (229)
Q Consensus 152 ~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~a~~~~~~~ 208 (229)
..+.+ ...|+++.|..+|...-...+......+-+|+.. +..++..+|...|..+
T Consensus 291 ~~r~A-lr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~-~~~g~~~~a~~~~~~~ 345 (618)
T 1qsa_A 291 RVRMA-LGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLL-LERGREAEAKEILHQL 345 (618)
T ss_dssp HHHHH-HHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHH-HHTTCHHHHHHHHHHH
T ss_pred HHHHH-HHCCCHHHHHHHHHHccccccccHhHHHHHHHHH-HHcCCHHHHHHHHHHH
Confidence 44444 4669999999999776554445667778888876 6666655555444443
No 263
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=80.12 E-value=5.4 Score=24.54 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
.+.+..+...|...-+.|+|.+|+.+|..+++.
T Consensus 16 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 345556667777788888888888888777664
No 264
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=79.63 E-value=19 Score=32.91 Aligned_cols=95 Identities=9% Similarity=0.062 Sum_probs=69.0
Q ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-C---------
Q psy13014 74 EGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL-N--------- 143 (229)
Q Consensus 74 ~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~-~--------- 143 (229)
+...+...+.++-|. ..+.-.|.+ +..-+.+|.+ +...|++++|..+|.+|-.- .
T Consensus 816 l~~~L~~~~~~~~a~----eL~~~~~~t-----~~~~yv~gr~------~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~ 880 (950)
T 4gq2_M 816 LVEKLFLFKQYNACM----QLIGWLNSD-----PIAVYLKALI------YLKSKEAVKAVRCFKTTSLVLYSHTSQFAVL 880 (950)
T ss_dssp HHHHHHHTTCHHHHH----HHGGGCCSS-----HHHHHHHHHH------HHHTTCHHHHHHHHHTCCCTTCSSCCSCGGG
T ss_pred HHHHHHHhcHHHHHH----HHHhhcCCC-----hHHHHHHHHH------HHHcCCHHHHHHHHHHHhhhcccCcccccch
Confidence 455666677776543 345667777 7777889999 99999999999999886421 1
Q ss_pred -----------CC--cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-CCcHHH
Q psy13014 144 -----------PS--YLKVYQRRARLYQQSDKLDEALADYQKILELD-PNNRDA 183 (229)
Q Consensus 144 -----------p~--~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~ 183 (229)
++ ....|.....++...+-++-+++..+.|++.- ++++..
T Consensus 881 ~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l 934 (950)
T 4gq2_M 881 REFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDL 934 (950)
T ss_dssp HHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHH
T ss_pred hhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccc
Confidence 11 12356667888889999999999999999754 455543
No 265
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=77.43 E-value=15 Score=25.32 Aligned_cols=54 Identities=9% Similarity=-0.065 Sum_probs=38.1
Q ss_pred ccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCC
Q psy13014 125 SLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDP 178 (229)
Q Consensus 125 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p 178 (229)
..|.-++=-+.+...+..++-++..++.+|.+|.+.|+..+|.+.+.+|-+..-
T Consensus 103 ~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 103 IQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKGE 156 (172)
T ss_dssp HTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred HhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhhh
Confidence 344444444444544455666789999999999999999999999988876543
No 266
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=76.53 E-value=4.1 Score=25.85 Aligned_cols=30 Identities=13% Similarity=0.372 Sum_probs=27.4
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Q psy13014 72 KDEGNALFRLNQWSESLAKYNEALRSCPRS 101 (229)
Q Consensus 72 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~ 101 (229)
..+|..+...|+++.|+.+|-+|+.+.|..
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 478999999999999999999999998875
No 267
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=76.34 E-value=7 Score=24.54 Aligned_cols=31 Identities=13% Similarity=0.184 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALR 96 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 96 (229)
+.+..+-..+..+...|+|++||++.+++..
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 5567778899999999999999998877764
No 268
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=75.18 E-value=9.3 Score=22.88 Aligned_cols=31 Identities=0% Similarity=0.024 Sum_probs=16.4
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhCCCcHHH
Q psy13014 153 RARLYQQSDKLDEALADYQKILELDPNNRDA 183 (229)
Q Consensus 153 la~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 183 (229)
+|..+...|++++|+.+|-+|+...|.-.+.
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 4555555555555555555555555544433
No 269
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=75.00 E-value=6.1 Score=24.81 Aligned_cols=17 Identities=29% Similarity=0.300 Sum_probs=9.6
Q ss_pred hhccCChHHHHHHHHHH
Q psy13014 123 YLSLEKPDQSILACSKA 139 (229)
Q Consensus 123 ~~~~~~~~~A~~~~~~a 139 (229)
+...|.|++||++..++
T Consensus 25 ll~~gkydeAIech~kA 41 (97)
T 2crb_A 25 LLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHH
Confidence 55555555555555544
No 270
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.66 E-value=9.8 Score=34.81 Aligned_cols=91 Identities=11% Similarity=-0.014 Sum_probs=62.0
Q ss_pred cccCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH-------HHHHHHhhhhhhhHHHHHHHHHHHHHHHHHcc
Q psy13014 10 LSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQF-------IFHVLFYLFCSQKLEQTAISLKDEGNALFRLN 82 (229)
Q Consensus 10 l~~~p~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (229)
+..-|.++...|.+|.++... |++++|..+|+++-..+.. ...........+...-....|......+.+.+
T Consensus 833 ~~~~~~t~~~~yv~gr~~L~~-ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~ 911 (950)
T 4gq2_M 833 IGWLNSDPIAVYLKALIYLKS-KEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEES 911 (950)
T ss_dssp GGGCCSSHHHHHHHHHHHHHT-TCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTT
T ss_pred HhhcCCChHHHHHHHHHHHHc-CCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcC
Confidence 345567777889999999999 9999999999876532100 00111111111111223457888888999999
Q ss_pred CHHHHHHHHHHHHHhCCCC
Q psy13014 83 QWSESLAKYNEALRSCPRS 101 (229)
Q Consensus 83 ~~~~A~~~~~~al~~~p~~ 101 (229)
-++-++...+.|+..-..+
T Consensus 912 a~~~vi~fA~lAI~~~~~d 930 (950)
T 4gq2_M 912 AYIDALEFSLLADASKETD 930 (950)
T ss_dssp CHHHHHHHHHHHHHTCCSC
T ss_pred CHHHHHHHHHHHHhhcccC
Confidence 9999999999999865433
No 271
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=72.16 E-value=9.5 Score=23.38 Aligned_cols=31 Identities=10% Similarity=0.041 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
.+..+...|...-+.|+|.+|+.+|..++..
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3444556667777778888888777777664
No 272
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=70.03 E-value=11 Score=27.49 Aligned_cols=37 Identities=11% Similarity=-0.170 Sum_probs=32.7
Q ss_pred hhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCcH
Q psy13014 105 SRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYL 147 (229)
Q Consensus 105 ~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 147 (229)
......+.+|.+ ++..++|.+|.+++..|+...|...
T Consensus 12 q~v~Y~YYlGr~------~~~~~~y~~A~~~L~~A~~~~~~~~ 48 (203)
T 3t5x_A 12 QRVTYKYYVGRK------AMFDSDFKQAEEYLSFAFEHCHRSS 48 (203)
T ss_dssp HHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHH------HHHHhCHHHHHHHHHHHHHHCCHhH
Confidence 357788999999 9999999999999999999988653
No 273
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=68.11 E-value=14 Score=22.78 Aligned_cols=31 Identities=16% Similarity=0.250 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
.+..+...|...-..|+|++|+.+|..++..
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3445566667777788888888888777664
No 274
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=66.16 E-value=12 Score=22.98 Aligned_cols=20 Identities=20% Similarity=0.415 Sum_probs=9.9
Q ss_pred HHHHhcccHHHHHHHHHHHH
Q psy13014 155 RLYQQSDKLDEALADYQKIL 174 (229)
Q Consensus 155 ~~~~~~~~~~~A~~~~~~al 174 (229)
.-.-..|+|++|+.+|..++
T Consensus 27 ve~D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 27 VKADKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHH
Confidence 33345555555555554444
No 275
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=64.96 E-value=31 Score=23.76 Aligned_cols=57 Identities=12% Similarity=-0.020 Sum_probs=43.5
Q ss_pred HHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCC
Q psy13014 77 ALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLNP 144 (229)
Q Consensus 77 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p 144 (229)
....+|+-++-.+.+...+.-.+-+ +.....+|.+ |.+.|+..+|-+.+.+|.+..-
T Consensus 100 ~lv~~~KkDqLdki~~~~l~n~~~~-----~~~l~kia~A------y~Klg~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 100 ILVIQGKRDKLEEIGREILKNNEVS-----ASILVAIANA------LRRVGDERDATTLLIEACKKGE 156 (172)
T ss_dssp HHHHTTCHHHHHHHHHHHC--CCSC-----HHHHHHHHHH------HHHTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHhccHhHHHHHHHHHhccCCCC-----hHHHHHHHHH------HHHhcchhhHHHHHHHHHHhhh
Confidence 3456677777667776655556666 9999999999 9999999999999999887643
No 276
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=64.73 E-value=49 Score=25.89 Aligned_cols=100 Identities=8% Similarity=-0.057 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---CCCCCchhhHHHHHhHhhhhhhhHHhhccCChH-HHHHHHHH
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRS---CPRSCSVSRAVFYANRSAALEKLASYLSLEKPD-QSILACSK 138 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~---~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~-~A~~~~~~ 138 (229)
...+-...++.-+..+.+.|++.-|.....-.++. .....+ ......+..+ +.....-+ .=..+.++
T Consensus 48 ~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~---~~~~~rl~~l------~~~~p~~~~~r~~fi~~ 118 (312)
T 2wpv_A 48 SYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVD---DISVARLVRL------IAELDPSEPNLKDVITG 118 (312)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCS---HHHHHHHHHH------HTTCCTTCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCC---HHHHHHHHHH------HHHCCCCCchHHHHHHH
Confidence 34455566777777778888877777654444333 211111 3344444444 43322111 11333444
Q ss_pred HHh-------cCCCcHHHHHHHHHHHHhcccHHHHHHHHH
Q psy13014 139 AIT-------LNPSYLKVYQRRARLYQQSDKLDEALADYQ 171 (229)
Q Consensus 139 al~-------~~p~~~~~~~~la~~~~~~~~~~~A~~~~~ 171 (229)
+++ ..-.++..+..+|..+..-|++.+|..+|-
T Consensus 119 ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 119 MNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 442 223578899999999999999999988774
No 277
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=64.55 E-value=8.9 Score=30.80 Aligned_cols=70 Identities=14% Similarity=0.054 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHccCH--HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 66 QTAISLKDEGNALFRLNQW--SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~--~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
..|.++-++|..--..--. ..++..|.+++............-.|..+|.+ +++.+++.+|+..+..+-.
T Consensus 253 rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy------~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 253 TYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGY------YYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhh------hhhcchHHHHHHHHHHHHH
Confidence 4455555666554432222 23777788877763222111126678888889 9999999999988877643
No 278
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=64.42 E-value=10 Score=31.45 Aligned_cols=93 Identities=9% Similarity=0.061 Sum_probs=63.9
Q ss_pred cCHHHHHHHHHHHHHhCCCCCc-------hhhHHH----HHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC-------
Q psy13014 82 NQWSESLAKYNEALRSCPRSCS-------VSRAVF----YANRSAALEKLASYLSLEKPDQSILACSKAITLN------- 143 (229)
Q Consensus 82 ~~~~~A~~~~~~al~~~p~~~~-------~~~~~~----~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~------- 143 (229)
...+++...+.+++...-.+.. ...-.. ...+-.+ |+++|+..-|...++..-...
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~ki------YFkl~~~~lckni~k~i~~~~~~p~~~~ 213 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNI------YFRIESPQLCSNIFKNFQPKSMLAHFNE 213 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHH------HHHSSCCTTHHHHHHTHHHHCCCSCGGG
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHH------HHHcCCHHHHHHHHHHhccCCCCcChhh
Confidence 4467888888888887432211 011222 2233455 999999999888886543322
Q ss_pred -CC--cHHHHHHHHHHHHhcccHHHHHHHHHHHHHh-CCCc
Q psy13014 144 -PS--YLKVYQRRARLYQQSDKLDEALADYQKILEL-DPNN 180 (229)
Q Consensus 144 -p~--~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-~p~~ 180 (229)
|. .+..+|.+|..+...++|.+|.+++..|+.. -|..
T Consensus 214 ~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 214 YQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred CCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 22 1456888999999999999999999999998 6654
No 279
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=64.29 E-value=17 Score=22.23 Aligned_cols=31 Identities=23% Similarity=0.289 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 67 TAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
.+..+...|...-..|+|++|+.+|..++..
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3444555666666778888887777777664
No 280
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=64.27 E-value=34 Score=23.93 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCch-hhHHHHHh---HhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 70 SLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSV-SRAVFYAN---RSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 70 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~-~~~~~~~~---lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
.-+..|..++..|+|-+|-+.++.+....+....+ ........ .|.. +...|+...|...+.+++..
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~------H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYK------HFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHH------HHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH------HHHhCCHHHHHHHHHHHHHH
Confidence 34668888999999999999999999887653111 11122222 2333 56779999999999988763
No 281
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=64.00 E-value=17 Score=22.80 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 68 AISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 68 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
+..+...|...-..|+|++|+.+|..++..
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 334455555666666666666666666553
No 282
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=62.80 E-value=15 Score=22.49 Aligned_cols=13 Identities=15% Similarity=-0.020 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHhc
Q psy13014 130 DQSILACSKAITL 142 (229)
Q Consensus 130 ~~A~~~~~~al~~ 142 (229)
++|+....+|++.
T Consensus 9 ~~Ai~lv~~Ave~ 21 (83)
T 2v6y_A 9 DMARKYAILAVKA 21 (83)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4556556555443
No 283
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=60.93 E-value=42 Score=24.45 Aligned_cols=66 Identities=9% Similarity=-0.020 Sum_probs=49.6
Q ss_pred HHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q psy13014 107 AVFYANRSAALEKLASYLSLEKPDQSILACSKAIT--LNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPN 179 (229)
Q Consensus 107 ~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 179 (229)
..+|...+.. + ..++...+...|.-... +.-..+..|...|..+...|++.+|.+.|+.+++..-.
T Consensus 80 LklWl~Ya~~------~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~ 147 (202)
T 3esl_A 80 LKIWIWYINL------F-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCR 147 (202)
T ss_dssp HHHHHHHHHH------H-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHh------h-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 4455555544 3 23446677888877655 45677888889999999999999999999999987643
No 284
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=59.63 E-value=19 Score=23.63 Aligned_cols=27 Identities=19% Similarity=0.327 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy13014 70 SLKDEGNALFRLNQWSESLAKYNEALR 96 (229)
Q Consensus 70 ~~~~~g~~~~~~~~~~~A~~~~~~al~ 96 (229)
.+...|...-..++|++|+.+|..++.
T Consensus 20 ~lv~~Ave~D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 20 DLASKAAQEDKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 334444445555666666666555544
No 285
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=59.04 E-value=16 Score=23.14 Aligned_cols=27 Identities=0% Similarity=0.023 Sum_probs=12.7
Q ss_pred HHHHHHhcccHHHHHHHHHHHHHhCCC
Q psy13014 153 RARLYQQSDKLDEALADYQKILELDPN 179 (229)
Q Consensus 153 la~~~~~~~~~~~A~~~~~~al~~~p~ 179 (229)
+|..+...|+++.|+.+|-+|+...|.
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 344444444444444444444444443
No 286
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=58.44 E-value=44 Score=23.34 Aligned_cols=61 Identities=7% Similarity=-0.163 Sum_probs=45.9
Q ss_pred HHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcCCCc--H----HHHHH-H--HHHHHhcccHHHHHHHHHHHHHh
Q psy13014 110 YANRSAALEKLASYLSLEKPDQSILACSKAITLNPSY--L----KVYQR-R--ARLYQQSDKLDEALADYQKILEL 176 (229)
Q Consensus 110 ~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~--~----~~~~~-l--a~~~~~~~~~~~A~~~~~~al~~ 176 (229)
-+..|.. ++..|+|-+|-+.++.+-...+.. . ..+.. + |..+...|+..-|...+.+++..
T Consensus 35 ~~~~~i~------lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 35 AVVHGVR------LYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHH------HHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHH------HHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3455667 888899999999999998876554 2 23334 3 44456779999999999999874
No 287
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=58.08 E-value=20 Score=22.10 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=12.4
Q ss_pred HHHHHhcccHHHHHHHHHHHHH
Q psy13014 154 ARLYQQSDKLDEALADYQKILE 175 (229)
Q Consensus 154 a~~~~~~~~~~~A~~~~~~al~ 175 (229)
|.-.-..|+|++|+.+|..+++
T Consensus 23 Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 23 AVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 4444556666666666655553
No 288
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=57.99 E-value=29 Score=21.72 Aligned_cols=63 Identities=17% Similarity=0.052 Sum_probs=39.9
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 72 KDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 72 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
+..|..++..|+|-+|-+.++......|.. ..........++..+. +...|+. |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~-~~~~~qGLIq~Ava~~----h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGE-ERRLLQGVILLAAALH----QRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHH----HHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCc-hHHHHHHHHHHHHHHH----HHHcCcH--HHHHHHHHHH
Confidence 346788889999999999999999988542 1111112222222210 4456776 8888888765
No 289
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=57.66 E-value=11 Score=22.90 Aligned_cols=27 Identities=11% Similarity=0.160 Sum_probs=23.4
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 71 LKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 71 ~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
...+|.-+...|+|+.|+.+|+.++..
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 456888899999999999999998875
No 290
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=57.63 E-value=36 Score=27.45 Aligned_cols=60 Identities=17% Similarity=0.172 Sum_probs=44.1
Q ss_pred HHHHHHHHHhc-----CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHh------CCCcHHHHHHhccCc
Q psy13014 132 SILACSKAITL-----NPSYLKVYQRRARLYQQSDKLDEALADYQKILEL------DPNNRDAYVATKVSP 191 (229)
Q Consensus 132 A~~~~~~al~~-----~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~ 191 (229)
++..|.++|.. +..+...|..+|-.+++.+++.+|+..+-.+-.. ..+|.+++..+-.+.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIA 346 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIA 346 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHH
Confidence 56666666653 3456778889999999999999999999887543 345666776665554
No 291
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=56.44 E-value=47 Score=28.94 Aligned_cols=42 Identities=7% Similarity=-0.026 Sum_probs=38.6
Q ss_pred hhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHH
Q psy13014 123 YLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLD 164 (229)
Q Consensus 123 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 164 (229)
.+..|+|.-|.+..+.++..+|++..+...++.+|.++|.-.
T Consensus 459 ~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 459 SYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 788999999999999999999999999999999999988543
No 292
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.14 E-value=3.8 Score=26.99 Aligned_cols=44 Identities=5% Similarity=0.138 Sum_probs=29.3
Q ss_pred ChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q psy13014 128 KPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPN 179 (229)
Q Consensus 128 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 179 (229)
.+++|..+..++|+++.. |.-...+.-|.+++..+.+++.+..+
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 367888888888887651 44444445566677777777777663
No 293
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=56.11 E-value=41 Score=27.88 Aligned_cols=70 Identities=9% Similarity=-0.022 Sum_probs=53.2
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCC--CC---CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-CC
Q psy13014 71 LKDEGNALFRLNQWSESLAKYNEALRSCP--RS---CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL-NP 144 (229)
Q Consensus 71 ~~~~g~~~~~~~~~~~A~~~~~~al~~~p--~~---~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~-~p 144 (229)
...+-.+|++.++..-+...+...-...+ .. .........+.+|.. ++..++|.+|.+++..|+.. .|
T Consensus 179 ~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~------~~~~~~y~~A~~~L~~A~~~lcp 252 (455)
T 3t5v_B 179 VNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRY------YLLNSQVHNAFVQFNEAFQSLLN 252 (455)
T ss_dssp HHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHH------HHHHccHHHHHHHHHHHHHhcCC
Confidence 33455789999999999888865544332 11 123467889999999 99999999999999999998 66
Q ss_pred Cc
Q psy13014 145 SY 146 (229)
Q Consensus 145 ~~ 146 (229)
..
T Consensus 253 ~~ 254 (455)
T 3t5v_B 253 LP 254 (455)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 294
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=54.42 E-value=16 Score=29.96 Aligned_cols=70 Identities=10% Similarity=0.024 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHccCH--HHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 66 QTAISLKDEGNALFRLNQW--SESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~--~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
..+.++-++|..--..--. ..++..|.+++............-.|..+|.+ +++.+++.+|+..+..+-.
T Consensus 275 rYPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy------~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 275 RYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGY------HCRNRNVREALQAWADTAT 346 (550)
T ss_dssp TCHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchh------hhhcchHHHHHHHHHHHHH
Confidence 3444555555544332111 13667777777653211111126678888889 9999999999988877643
No 295
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=54.38 E-value=37 Score=21.16 Aligned_cols=49 Identities=24% Similarity=0.260 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHH-HhHhhh
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFY-ANRSAA 116 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~-~~lg~~ 116 (229)
...+......|.-++..++|.+|...|+++..+..+.. ...++ +.++.|
T Consensus 50 e~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~---i~ki~~fyl~ec 99 (106)
T 2vkj_A 50 EKKARSLIAEGKDLFETANYGEALVFFEKALNLSDNEE---IKKIASFYLEEC 99 (106)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHH---HHHHHHHHHHHH
Confidence 46778888999999999999999999999997755421 12223 666666
No 296
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=53.88 E-value=25 Score=21.41 Aligned_cols=18 Identities=22% Similarity=0.401 Sum_probs=8.8
Q ss_pred HhcccHHHHHHHHHHHHH
Q psy13014 158 QQSDKLDEALADYQKILE 175 (229)
Q Consensus 158 ~~~~~~~~A~~~~~~al~ 175 (229)
-..|+|++|+..|..+++
T Consensus 24 D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 24 DTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 344555555555544443
No 297
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=53.72 E-value=22 Score=31.02 Aligned_cols=50 Identities=14% Similarity=0.071 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhh
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKE 197 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 197 (229)
.......|...+..|+|..|.+....++..+|++..+...++.++ ++++.
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~-~~l~~ 498 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADAL-EQLGY 498 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHH-HHHHH
Confidence 345666788888999999999999999999999999999999998 66654
No 298
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=53.62 E-value=25 Score=21.97 Aligned_cols=45 Identities=13% Similarity=0.186 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcH
Q psy13014 129 PDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNR 181 (229)
Q Consensus 129 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~ 181 (229)
.+.|+..+.+|++.+-. +..-....-|.+|++.|..++...|+..
T Consensus 12 l~~Ai~lv~~Ave~D~~--------g~y~eAl~~Y~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAE--------SRYQQALVCYQEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHHHHHHHT--------TCHHHHHHHHHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHHHCCCHH
Confidence 45666666666554211 1111122233445555555555565544
No 299
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=50.46 E-value=20 Score=29.33 Aligned_cols=83 Identities=10% Similarity=0.043 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHccC--HHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-
Q psy13014 66 QTAISLKDEGNALFRLNQ--WSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL- 142 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~--~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~- 142 (229)
..|.++-++|.+.-..-. ...++..|++|+............-.|..+|.. +.+.+++.+|+..+.++-..
T Consensus 260 ~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~------~~R~~~~~eAl~~wa~aa~Vi 333 (489)
T 4gq4_A 260 RYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGY------HCRNRNVREALQAWADTATVI 333 (489)
T ss_dssp TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHH
T ss_pred hcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchH------HHHhhhHHHHHHHhhhhhhhh
Confidence 445555566655433221 234667788887753222111236678888888 88999999999988877432
Q ss_pred -----CCCcHHHHHHHH
Q psy13014 143 -----NPSYLKVYQRRA 154 (229)
Q Consensus 143 -----~p~~~~~~~~la 154 (229)
.-++...|-.+-
T Consensus 334 ~~YnY~reDeEiYke~~ 350 (489)
T 4gq4_A 334 QDYNYCREDEEIYKEFF 350 (489)
T ss_dssp TTSCCCTTCHHHHHHHH
T ss_pred hhcccccchHHHHHHHH
Confidence 344555554443
No 300
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=50.17 E-value=46 Score=27.36 Aligned_cols=48 Identities=21% Similarity=0.152 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHhcCC--------CcHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy13014 129 PDQSILACSKAITLNP--------SYLKVYQRRARLYQQSDKLDEALADYQKILEL 176 (229)
Q Consensus 129 ~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 176 (229)
++..+..++.|+..-| +...++..+|.++...|++++|+...++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 4556666777766533 33567888999999999999999999999864
No 301
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=49.66 E-value=17 Score=22.08 Aligned_cols=25 Identities=32% Similarity=0.464 Sum_probs=16.4
Q ss_pred HHHHHHHHhcccHHHHHHHHHHHHH
Q psy13014 151 QRRARLYQQSDKLDEALADYQKILE 175 (229)
Q Consensus 151 ~~la~~~~~~~~~~~A~~~~~~al~ 175 (229)
..+|.=+...|+|+.|+.+|+.+++
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHH
Confidence 3456666667777777777776664
No 302
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=48.27 E-value=29 Score=22.75 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHH
Q psy13014 129 PDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRD 182 (229)
Q Consensus 129 ~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 182 (229)
.++|+..+.+|++.+- -+..-....-|.+|++.|..++...+.++.
T Consensus 15 l~kAi~lv~~Ave~D~--------ag~y~eAl~lY~~Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDK--------AGNYEEALQLYQHAVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHHHHHHH--------HTCHHHHHHHHHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHHHHHH--------ccCHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 4566666666653311 122222222344445555555555645544
No 303
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=47.10 E-value=61 Score=26.77 Aligned_cols=49 Identities=14% Similarity=0.179 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHhcCCC--------cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy13014 129 PDQSILACSKAITLNPS--------YLKVYQRRARLYQQSDKLDEALADYQKILELD 177 (229)
Q Consensus 129 ~~~A~~~~~~al~~~p~--------~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 177 (229)
++..++.++.|+..-|. ...++..+|.+|...|++++|+...++++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 45667777777765443 35578889999999999999999999999754
No 304
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=46.70 E-value=52 Score=27.11 Aligned_cols=48 Identities=15% Similarity=0.110 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHHhcCC--------CcHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy13014 129 PDQSILACSKAITLNP--------SYLKVYQRRARLYQQSDKLDEALADYQKILEL 176 (229)
Q Consensus 129 ~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 176 (229)
++..++.++.|+..-| +...++..+|.++...|++++|+...++++..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3555666666665433 33567888999999999999999999999864
No 305
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=45.86 E-value=50 Score=24.46 Aligned_cols=69 Identities=9% Similarity=-0.006 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 62 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
..++....+|...+... +++...|.......-... .+..|...|.. +...|++.+|...|...++
T Consensus 114 knD~RyLklWl~Ya~~~------~~p~~if~~L~~~~IG~~---~AlfYe~wA~~------lE~~g~~~~A~~Vy~~Gi~ 178 (223)
T 4aez_C 114 KDDVRYLRIWMQYVNYI------DEPVELFSFLAHHHIGQE---SSIFYEEYANY------FESRGLFQKADEVYQKGKR 178 (223)
T ss_dssp TTCHHHHHHHHHHHTTC------SCHHHHHHHHHHTTCSTT---BHHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHcc------CCHHHHHHHHHHCCcchh---HHHHHHHHHHH------HHHcCCHHHHHHHHHHHHH
Confidence 34556666666666531 345556655555432221 16667777777 7778888888888888877
Q ss_pred cCCC
Q psy13014 142 LNPS 145 (229)
Q Consensus 142 ~~p~ 145 (229)
....
T Consensus 179 ~~A~ 182 (223)
T 4aez_C 179 MKAK 182 (223)
T ss_dssp HTCB
T ss_pred cCCc
Confidence 6543
No 306
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=45.72 E-value=64 Score=26.88 Aligned_cols=49 Identities=24% Similarity=0.168 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHhcCC-----------CcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy13014 129 PDQSILACSKAITLNP-----------SYLKVYQRRARLYQQSDKLDEALADYQKILELD 177 (229)
Q Consensus 129 ~~~A~~~~~~al~~~p-----------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 177 (229)
++..++.++.|+..-| +...++..+|.+|...+++++|+...++++...
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 3455666666665433 234578889999999999999999999999764
No 307
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=45.25 E-value=68 Score=26.40 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=43.9
Q ss_pred HHHHHHHHHhc-----CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHh------CCCcHHHHHHhccCc
Q psy13014 132 SILACSKAITL-----NPSYLKVYQRRARLYQQSDKLDEALADYQKILEL------DPNNRDAYVATKVSP 191 (229)
Q Consensus 132 A~~~~~~al~~-----~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~ 191 (229)
++..|.+++.. ...+...|..+|-.+++.+++.+|+..+-.+-.. ..+|.+++..+-.+.
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIA 368 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVA 368 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHH
Confidence 45666666543 3456778889999999999999999999887543 355677777666554
No 308
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=44.44 E-value=63 Score=26.53 Aligned_cols=61 Identities=13% Similarity=0.115 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhc-----CCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHh------CCCcHHHHHHhccCc
Q psy13014 131 QSILACSKAITL-----NPSYLKVYQRRARLYQQSDKLDEALADYQKILEL------DPNNRDAYVATKVSP 191 (229)
Q Consensus 131 ~A~~~~~~al~~-----~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~l~~~~ 191 (229)
.++..|.+||.. ...+...|..+|-.+...+++.+|+..+..+-.. ..+|.+.+..+..+.
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIa 353 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVA 353 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHH
Confidence 345666666653 3456777888999999999999999999988543 556777777766555
No 309
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=43.52 E-value=98 Score=22.95 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=37.1
Q ss_pred ccCChHHHHHHHHHHHhc-----CCCcH---HHHHHHHHHHH-hcccHHHHHHHHHHHHHh
Q psy13014 125 SLEKPDQSILACSKAITL-----NPSYL---KVYQRRARLYQ-QSDKLDEALADYQKILEL 176 (229)
Q Consensus 125 ~~~~~~~A~~~~~~al~~-----~p~~~---~~~~~la~~~~-~~~~~~~A~~~~~~al~~ 176 (229)
..|+.+.|...|+.|..+ .|.+| ....+.+..|+ -+++.++|....++++..
T Consensus 137 ~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 137 GLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 456788999999988764 34443 44555555544 678999999999999764
No 310
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=42.99 E-value=94 Score=22.58 Aligned_cols=76 Identities=11% Similarity=-0.098 Sum_probs=58.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHH
Q psy13014 61 SQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAI 140 (229)
Q Consensus 61 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al 140 (229)
-..++....+|...+..+ ..++..++...|.-.....-... .+..|...|.. +...|++.+|.+.|+..+
T Consensus 73 YkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~---~AlfYe~wA~~------lE~~g~~~~A~~Vy~~GI 142 (202)
T 3esl_A 73 YRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTK---LSLFYEEFSKL------LENAQFFLEAKVLLELGA 142 (202)
T ss_dssp GTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTT---BHHHHHHHHHH------HHHTTCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHH---HHHHHHHHHHH------HHHcCCHHHHHHHHHHHH
Confidence 356778888888888766 33446788888888777653321 28888888999 999999999999999999
Q ss_pred hcCCCc
Q psy13014 141 TLNPSY 146 (229)
Q Consensus 141 ~~~p~~ 146 (229)
+....-
T Consensus 143 ~~~A~P 148 (202)
T 3esl_A 143 ENNCRP 148 (202)
T ss_dssp HTTCBS
T ss_pred HcCCcc
Confidence 987543
No 311
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.79 E-value=78 Score=20.73 Aligned_cols=15 Identities=20% Similarity=0.182 Sum_probs=7.0
Q ss_pred hHHHHHHHHHHHhcC
Q psy13014 129 PDQSILACSKAITLN 143 (229)
Q Consensus 129 ~~~A~~~~~~al~~~ 143 (229)
|.++|..++++|.+.
T Consensus 45 Yk~GI~eLe~Gl~I~ 59 (116)
T 2dl1_A 45 YKQGIGHLLRGISIS 59 (116)
T ss_dssp HHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhcccc
Confidence 344444444544443
No 312
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=37.32 E-value=75 Score=19.81 Aligned_cols=51 Identities=6% Similarity=-0.178 Sum_probs=37.1
Q ss_pred hhccCChHHHHHHHHHHHhcCCCcHH----HHHHH--HHHHHhcccHHHHHHHHHHHHH
Q psy13014 123 YLSLEKPDQSILACSKAITLNPSYLK----VYQRR--ARLYQQSDKLDEALADYQKILE 175 (229)
Q Consensus 123 ~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~l--a~~~~~~~~~~~A~~~~~~al~ 175 (229)
++..|+|-+|-+.++.+-...|.... .+..+ |..+...|+. |...+.+++.
T Consensus 11 lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 11 LWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 78889999999999999888765322 23333 4444556777 8888988876
No 313
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=37.11 E-value=30 Score=25.56 Aligned_cols=36 Identities=3% Similarity=0.039 Sum_probs=28.9
Q ss_pred HHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhh
Q psy13014 76 NALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAA 116 (229)
Q Consensus 76 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~ 116 (229)
.++.+.|.|++|.+.+++.+..+|.+ ......|..+
T Consensus 122 ~VCiek~~f~kA~eiLkr~~~~~~s~-----~kLr~kL~~I 157 (235)
T 3bu8_A 122 IICIKNKEFEKASKILKKHMSKDPTT-----QKLRNDLLNI 157 (235)
T ss_dssp HHHHHTTCHHHHHHHHHHHSTTCGGG-----HHHHHHHHHH
T ss_pred HHHHHhcchHHHHHHHHHHhcCCCCc-----hHHHHHHHHH
Confidence 35688999999999999999987766 5566666666
No 314
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=36.24 E-value=89 Score=26.01 Aligned_cols=53 Identities=19% Similarity=0.223 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHhCCCCC------chhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhcC
Q psy13014 85 SESLAKYNEALRSCPRSC------SVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITLN 143 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~~------~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 143 (229)
+.-+..++.|+..-|... ......++..+|.+ |+..++|++|+..+++++...
T Consensus 175 ~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArv------yL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 175 AQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRA------CLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHH------HHHhhhHHHHHHHHHHHHhcC
Confidence 444555666666554321 12346788889999 999999999999999999753
No 315
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=35.61 E-value=96 Score=25.43 Aligned_cols=53 Identities=11% Similarity=0.076 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhCCCC---CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 84 WSESLAKYNEALRSCPRS---CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~---~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
++..+..++.|+..-|.. .......++..+|.+ |+..++|++|+...++++..
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarv------yL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARI------YLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHH------HHhcccHHHHHHHHHHHHhC
Confidence 345555666666665532 122346788889999 99999999999999999863
No 316
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=35.20 E-value=26 Score=25.50 Aligned_cols=36 Identities=6% Similarity=0.035 Sum_probs=24.1
Q ss_pred HHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhh
Q psy13014 76 NALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAA 116 (229)
Q Consensus 76 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~ 116 (229)
.++...|.|++|.+.+++.+..++.+ ......|..+
T Consensus 125 ~VCiekg~Fk~A~eiLkr~f~~~~~~-----~~lr~kL~~I 160 (211)
T 3bqo_A 125 AVCMENGNFKEAEEVFERIFGDPNSH-----MPFKSKLLMI 160 (211)
T ss_dssp HHHHHTTCHHHHHHHHHHHC-----C-----CTTHHHHHHH
T ss_pred HHHHHccchHHHHHHHHHHhcCCCCc-----hHHHHHHHHH
Confidence 46899999999999999999988776 4444555555
No 317
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=33.34 E-value=1.2e+02 Score=21.11 Aligned_cols=69 Identities=14% Similarity=0.047 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCCchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 62 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
.+++....+|...+... +++...|.......-... .+..|...|.. +...|++.+|.+.|..+++
T Consensus 60 knD~RyLklWl~ya~~~------~~p~~if~~L~~~~IG~~---~AlfY~~wA~~------lE~~~~~~~A~~Iy~~Gi~ 124 (164)
T 2wvi_A 60 YSDPRFLNLWLKLGRLC------NEPLDMYSYLHNQGIGVS---LAQFYISWAEE------YEARENFRKADAIFQEGIQ 124 (164)
T ss_dssp TTCHHHHHHHHHHHHHC------SCHHHHHHHHHHTTSSTT---BHHHHHHHHHH------HHHTTCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhc------CCHHHHHHHHHHCCcchh---hHHHHHHHHHH------HHHcCCHHHHHHHHHHHHH
Confidence 45667777777777653 235556666655432221 27777777888 8888888888888888888
Q ss_pred cCCC
Q psy13014 142 LNPS 145 (229)
Q Consensus 142 ~~p~ 145 (229)
....
T Consensus 125 ~~A~ 128 (164)
T 2wvi_A 125 QKAE 128 (164)
T ss_dssp TTCB
T ss_pred cCCC
Confidence 7643
No 318
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=31.51 E-value=1.1e+02 Score=25.22 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhCCCC---CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHh
Q psy13014 85 SESLAKYNEALRSCPRS---CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAIT 141 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~---~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~ 141 (229)
+.-+..++.|+..-|.. .......++..+|.+ |+..++|++|+...+++|.
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArv------yL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRV------YLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHH------HHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHH------HHHhCCHHHHHHHHHHHHh
Confidence 44555566666655532 123357788889999 9999999999999999986
No 319
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=30.12 E-value=1.2e+02 Score=25.03 Aligned_cols=32 Identities=19% Similarity=-0.032 Sum_probs=27.9
Q ss_pred cHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Q psy13014 146 YLKVYQRRARLYQQSDKLDEALADYQKILELD 177 (229)
Q Consensus 146 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 177 (229)
...++-.+|.++...+++++|....++++...
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~~~ 221 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARKGY 221 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 35578889999999999999999999998653
No 320
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=29.84 E-value=1.2e+02 Score=25.02 Aligned_cols=31 Identities=19% Similarity=0.033 Sum_probs=27.8
Q ss_pred hHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 106 RAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 106 ~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
...++..+|.+ |+..+++++|+...++++..
T Consensus 190 k~aA~aLlARv------yL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 190 TDVVNGLMARA------YLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHH------HHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHH------HHHhcCHHHHHHHHHHHHhc
Confidence 46788889999 99999999999999999864
No 321
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=29.29 E-value=1.3e+02 Score=25.05 Aligned_cols=30 Identities=10% Similarity=0.289 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILEL 176 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 176 (229)
..++..+|.++...+++++|+...++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457888999999999999999999999864
No 322
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=28.73 E-value=1.2e+02 Score=25.02 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHhCCCC---CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 84 WSESLAKYNEALRSCPRS---CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 84 ~~~A~~~~~~al~~~p~~---~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
++.-+..++.|+..-|.. .......++..+|.+ |+..++|++|++.++++|..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarv------yL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRV------YLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHH------HHHhcCHHHHHHHHHHHHhC
Confidence 445555566666655532 122356788889999 99999999999999999874
No 323
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=28.46 E-value=77 Score=19.67 Aligned_cols=15 Identities=20% Similarity=0.127 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHhC
Q psy13014 84 WSESLAKYNEALRSC 98 (229)
Q Consensus 84 ~~~A~~~~~~al~~~ 98 (229)
+++|..+..+++..+
T Consensus 13 h~~AF~~Is~aL~~D 27 (89)
T 3eab_A 13 HKQAFEYISIALRID 27 (89)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 445555555555543
No 324
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=28.19 E-value=2.2e+02 Score=22.35 Aligned_cols=32 Identities=13% Similarity=0.254 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHH
Q psy13014 16 FLYTIYFSCFILFILFSEIRTDCHQFERQVFYI 48 (229)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 48 (229)
.....+..|.-++.. |++.+|...|...+..+
T Consensus 101 ~l~~~Lk~gyk~~t~-gKf~eAl~~Fr~iL~~i 132 (320)
T 3mkr_B 101 DLIQRLQLCYQLTTV-GKFEEAVEKFRSILLSV 132 (320)
T ss_dssp HHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHHh
Confidence 355567788888888 99999999998877544
No 325
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.76 E-value=1.2e+02 Score=24.91 Aligned_cols=30 Identities=20% Similarity=0.162 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILEL 176 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 176 (229)
..++..+|.++...|++++|+...++++..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 457888999999999999999999999864
No 326
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.31 E-value=1.5e+02 Score=24.34 Aligned_cols=31 Identities=6% Similarity=-0.126 Sum_probs=27.4
Q ss_pred hHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 106 RAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 106 ~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
...++..+|.+ |+..+++++|+..++++|..
T Consensus 196 k~aA~allarv------yL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHI------CAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHH------HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------HHHHhhHHHHHHHHHHHHhC
Confidence 46678889999 99999999999999999864
No 327
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=26.43 E-value=90 Score=19.09 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=19.1
Q ss_pred ccHHHHHHHHHHHHHhCCCcHHHHHHhccC
Q psy13014 161 DKLDEALADYQKILELDPNNRDAYVATKVS 190 (229)
Q Consensus 161 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 190 (229)
+...+++..-.++++.+|++|..+..+...
T Consensus 24 ~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~k 53 (85)
T 2ca5_A 24 QTLQGELTLALDKLAKNPSNPQLLAEYQSK 53 (85)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 345556666666677788888776655433
No 328
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=25.63 E-value=1.4e+02 Score=20.35 Aligned_cols=33 Identities=6% Similarity=0.082 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 65 EQTAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 65 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
-..+..++..|..|...|+.+.|.-.|-+.+.+
T Consensus 37 lrta~~llr~A~~y~~egd~e~AYily~R~~~L 69 (146)
T 2xze_A 37 FRSGVEIIRMASIYSEEGNIEHAFILYNKYITL 69 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 355667888999999999999999999887655
No 329
>3s6n_M SurviVal motor neuron protein; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_B
Probab=24.37 E-value=59 Score=16.22 Aligned_cols=17 Identities=12% Similarity=0.210 Sum_probs=13.0
Q ss_pred CChHHHHHHHHHHHhcC
Q psy13014 127 EKPDQSILACSKAITLN 143 (229)
Q Consensus 127 ~~~~~A~~~~~~al~~~ 143 (229)
+-|++|+..|+.+++.+
T Consensus 16 KayDKAVaSfk~alk~~ 32 (37)
T 3s6n_M 16 KAYDKAVASFKHALKNG 32 (37)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 34788998888888754
No 330
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=24.28 E-value=1.4e+02 Score=24.65 Aligned_cols=46 Identities=15% Similarity=-0.033 Sum_probs=35.0
Q ss_pred HHHHHHHHHHhc-CC--------CcHHHHHHHHHHHHhcc---------cHHHHHHHHHHHHHh
Q psy13014 131 QSILACSKAITL-NP--------SYLKVYQRRARLYQQSD---------KLDEALADYQKILEL 176 (229)
Q Consensus 131 ~A~~~~~~al~~-~p--------~~~~~~~~la~~~~~~~---------~~~~A~~~~~~al~~ 176 (229)
..+..++.|+.. -| +...++..+|.++...+ ++++|+...++++..
T Consensus 163 ~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 163 IIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp THHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 455566666665 23 33567888999999988 999999999999874
No 331
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=24.10 E-value=1.1e+02 Score=25.41 Aligned_cols=47 Identities=17% Similarity=0.200 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHhcCC--------CcHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy13014 129 PDQSILACSKAITLNP--------SYLKVYQRRARLYQQSDKLDEALADYQKILE 175 (229)
Q Consensus 129 ~~~A~~~~~~al~~~p--------~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 175 (229)
|+..++.++.|+..-| +...++..+|.+|...+++++|+...++++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3455566666665433 2355788899999999999999999988874
No 332
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=23.92 E-value=1.9e+02 Score=24.15 Aligned_cols=52 Identities=21% Similarity=0.259 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhCCCC------CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc
Q psy13014 85 SESLAKYNEALRSCPRS------CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL 142 (229)
Q Consensus 85 ~~A~~~~~~al~~~p~~------~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~ 142 (229)
+.-+..++.|+..-|.. .......++..+|.+ ++..+++++|+..+++++..
T Consensus 154 ~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv------~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 154 DFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRV------ELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHH------HHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHh
Confidence 44445556666554431 112346788889999 99999999999999999964
No 333
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=23.81 E-value=2.3e+02 Score=21.07 Aligned_cols=46 Identities=17% Similarity=0.176 Sum_probs=0.0
Q ss_pred HHHHHHHHHHH-----hcCCCcHH---HHHHHHHHHHh-cccHHHHHHHHHHHHH
Q psy13014 130 DQSILACSKAI-----TLNPSYLK---VYQRRARLYQQ-SDKLDEALADYQKILE 175 (229)
Q Consensus 130 ~~A~~~~~~al-----~~~p~~~~---~~~~la~~~~~-~~~~~~A~~~~~~al~ 175 (229)
+.|...|+.|+ .+.|.+|- ...+.+..|+. +++.++|....++++.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
No 334
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=29.13 E-value=17 Score=31.81 Aligned_cols=48 Identities=17% Similarity=0.079 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhCCCcHHHHHHhccCchHHHhh
Q psy13014 149 VYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPDLKLKE 197 (229)
Q Consensus 149 ~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 197 (229)
.....|...+..|+|..|.+....++..+|++..+...++.++ ++++.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~-~~l~~ 510 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAM-EQLGY 510 (668)
Confidence 3445667777889999999999999999999999999999888 55553
No 335
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=22.98 E-value=95 Score=20.65 Aligned_cols=66 Identities=11% Similarity=-0.037 Sum_probs=41.5
Q ss_pred hhccCChHHHHHHHHHH---HhcCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC--cHHHHHHhccCc
Q psy13014 123 YLSLEKPDQSILACSKA---ITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPN--NRDAYVATKVSP 191 (229)
Q Consensus 123 ~~~~~~~~~A~~~~~~a---l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~l~~~~ 191 (229)
++..++.+..+..+... ++..|.. ....+.....-.++.+|..++++..+..-. ...+|..+..++
T Consensus 50 yf~~~n~~~m~~~L~pLh~~l~~~PeT---~~E~sF~~~fG~~L~~A~~~~~~y~~t~d~~~lnqAWd~Y~~Vf 120 (126)
T 2npu_A 50 YFGERNVKGMFEVLEPLHAMMERGPQT---LKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVF 120 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HhcccCHHHHHHHHHHHHHHHccCCCC---HHHHHHHHHHhHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHH
Confidence 77888999998888766 4445544 344444445556778888888877644322 224666555555
No 336
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=22.54 E-value=2.4e+02 Score=20.82 Aligned_cols=50 Identities=16% Similarity=0.175 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHh--cCCCcHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCC
Q psy13014 130 DQSILACSKAIT--LNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPN 179 (229)
Q Consensus 130 ~~A~~~~~~al~--~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~ 179 (229)
+.+...|..... +.-..+..|...|..+...|++.+|.+.|+.+++..-.
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 355566665554 45677888889999999999999999999999988654
No 337
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=21.55 E-value=2.7e+02 Score=21.08 Aligned_cols=68 Identities=21% Similarity=0.219 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHccC----------HHHHHHHHHHHHHhC----CCCCchhhHHHHHhHhhhhhhhHHhhccCChHHH
Q psy13014 67 TAISLKDEGNALFRLNQ----------WSESLAKYNEALRSC----PRSCSVSRAVFYANRSAALEKLASYLSLEKPDQS 132 (229)
Q Consensus 67 ~~~~~~~~g~~~~~~~~----------~~~A~~~~~~al~~~----p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A 132 (229)
....+...|..|.-.-+ -++|...|+.|+.+. |.+ +.+..+..+.+..+ |.-+++.++|
T Consensus 145 kVFY~KMKGDYyRYlaE~~~g~~r~~~~e~a~~aY~~A~~iA~~L~pth--PirLGLaLNfSVFy-----YEiln~~~~A 217 (260)
T 2npm_A 145 KVFYFKMKGDYHRYISEFSTGDSKQSSAEDALKAYKDATVVAKDLEPTH--PIRLGLALNFSVFH-----YEILNEPRAA 217 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTTSCTTC--HHHHHHHHHHHHHH-----HHTSCCHHHH
T ss_pred HHHHHHHhccHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhCCCCC--cHHHHHHHHHHHHH-----HHHcCCHHHH
Confidence 34445556665543322 357888899888763 332 23445555555551 3458999999
Q ss_pred HHHHHHHHh
Q psy13014 133 ILACSKAIT 141 (229)
Q Consensus 133 ~~~~~~al~ 141 (229)
....++|+.
T Consensus 218 c~lAk~Afd 226 (260)
T 2npm_A 218 IDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887777654
No 338
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=21.55 E-value=2e+02 Score=19.56 Aligned_cols=32 Identities=6% Similarity=0.005 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Q psy13014 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRS 97 (229)
Q Consensus 66 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 97 (229)
..+..++..|..|...|+.++|.-.|-+.+.+
T Consensus 40 rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L 71 (144)
T 2a9u_A 40 HSALKIFKTAEECRLDRDEERAYVLYMKYVTV 71 (144)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45567888999999999999999999887655
No 339
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=25.94 E-value=21 Score=31.22 Aligned_cols=44 Identities=9% Similarity=0.003 Sum_probs=39.6
Q ss_pred hhccCChHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHH
Q psy13014 123 YLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEA 166 (229)
Q Consensus 123 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A 166 (229)
.+..|+|.-|.+..+.++..+|++..+...++.++.++|.-.+.
T Consensus 471 ~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 471 AIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 78899999999999999999999999999999999998865543
No 340
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=20.45 E-value=1.8e+02 Score=18.59 Aligned_cols=34 Identities=15% Similarity=-0.109 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALR 96 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~ 96 (229)
....++......+....+.|+|++|.+.++++-.
T Consensus 15 ~~aG~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 15 AYAGDARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 4456777788888889999999999999887755
No 341
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=20.37 E-value=2.3e+02 Score=23.73 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Q psy13014 147 LKVYQRRARLYQQSDKLDEALADYQKILEL 176 (229)
Q Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 176 (229)
..++..+|.++...+++++|....++++..
T Consensus 198 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 198 QAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 457888999999999999999999999864
No 342
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=20.24 E-value=3.3e+02 Score=21.71 Aligned_cols=94 Identities=10% Similarity=0.045 Sum_probs=61.5
Q ss_pred HHHHHccCHHHHHHHHHHHHHhC-------CCC-----CchhhHHHHHhHhhhhhhhHHhhccCChHHHHHHHHHHHhc-
Q psy13014 76 NALFRLNQWSESLAKYNEALRSC-------PRS-----CSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKAITL- 142 (229)
Q Consensus 76 ~~~~~~~~~~~A~~~~~~al~~~-------p~~-----~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~A~~~~~~al~~- 142 (229)
.+..+..+..+|++++++..... ..+ .......+...++.. |...|+.++|...++++-..
T Consensus 84 ~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~------yl~~~d~~~a~~~l~~~~~~l 157 (393)
T 4b4t_O 84 ASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIART------YLLKNDLVKARDLLDDLEKTL 157 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHH------HHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHH------HHhcCCHHHHHHHHHHHHHhh
Confidence 34556788999999988763321 000 001124456667888 89999999999999887542
Q ss_pred ------CCC-cHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Q psy13014 143 ------NPS-YLKVYQRRARLYQQSDKLDEALADYQKILE 175 (229)
Q Consensus 143 ------~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 175 (229)
+|. +...+...+..+...+++..+....-..+.
T Consensus 158 ~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 158 DKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 221 234455567778888888887777666664
No 343
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=20.08 E-value=3.2e+02 Score=21.50 Aligned_cols=97 Identities=9% Similarity=-0.039 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CCCCchhhHHHHHhHhhhhhhhHHhhccCCh--------
Q psy13014 63 KLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSC-----PRSCSVSRAVFYANRSAALEKLASYLSLEKP-------- 129 (229)
Q Consensus 63 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~-------- 129 (229)
...+-.+.++.-+..+++.|++.-|.+...-.++.. |-+ ......+..+ +.....-
T Consensus 50 ~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~-----~~~~~rL~~L------~~~~~~~~p~r~~fi 118 (336)
T 3lpz_A 50 NWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVD-----GASRGKLLGC------LRLFQPGEPVRKRFV 118 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCC-----HHHHHHHHHH------HTTSCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCC-----HHHHHHHHHH------HHhCCCCCcHHHHHH
Confidence 334455566666666666666666665543333321 111 3334444444 3333321
Q ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcccHHHHHHHH
Q psy13014 130 DQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADY 170 (229)
Q Consensus 130 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~ 170 (229)
.+|+.+-.+.=...-.++..+..+|..+.+-+++.+|..+|
T Consensus 119 ~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 119 KEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 23333333311223457888889999999998988887776
Done!