RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13014
(229 letters)
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing
protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 201
Score = 63.8 bits (154), Expect = 4e-13
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 67 TAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSL 126
+A LK++GN LF ++ E+ A Y A+ P AV+Y NR+ YL +
Sbjct: 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV-----AVYYTNRALC------YLKM 51
Query: 127 EKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
++P+Q++ C +A+ L+ +K + + + + DEA+A+ Q+ L R +
Sbjct: 52 QQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNF 109
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT
{Human (Homo sapiens) [TaxId: 9606]}
Length = 388
Score = 64.7 bits (156), Expect = 6e-13
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 11/110 (10%)
Query: 75 GNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSIL 134
NAL +E+ YN ALR CP + ++++
Sbjct: 278 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANI-----------KREQGNIEEAVR 326
Query: 135 ACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
KA+ + P + + A + QQ KL EAL Y++ + + P DAY
Sbjct: 327 LYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAY 376
Score = 51.6 bits (122), Expect = 2e-08
Identities = 10/68 (14%), Positives = 23/68 (33%)
Query: 117 LEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILEL 176
+E + + C + P V + ++ Q +LD + ++
Sbjct: 3 MELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQ 62
Query: 177 DPNNRDAY 184
+P +AY
Sbjct: 63 NPLLAEAY 70
Score = 43.5 bits (101), Expect = 1e-05
Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 11/89 (12%)
Query: 71 LKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPD 130
+ + ++ + + + R P + S+ + + D
Sbjct: 2 PMELAHREYQAGDFEAAERHCMQLWRQEPDN-----TGVLLLLSSI------HFQCRRLD 50
Query: 131 QSILACSKAITLNPSYLKVYQRRARLYQQ 159
+S + AI NP + Y +Y++
Sbjct: 51 RSAHFSTLAIKQNPLLAEAYSNLGNVYKE 79
Score = 42.0 bits (97), Expect = 3e-05
Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 75 GNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSIL 134
N E++ Y +AL P A ++N ++ L++ K ++++
Sbjct: 312 ANIKREQGNIEEAVRLYRKALEVFPEF-----AAAHSNLASVLQQQ------GKLQEALM 360
Query: 135 ACSKAITLNPSYLKVYQRRARLYQQ 159
+AI ++P++ Y ++
Sbjct: 361 HYKEAIRISPTFADAYSNMGNTLKE 385
Score = 41.6 bits (96), Expect = 3e-05
Identities = 25/185 (13%), Positives = 53/185 (28%), Gaps = 6/185 (3%)
Query: 6 YQQELSKNPSFLYTIY-----FSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFC 60
+ +NP + E + +
Sbjct: 56 STLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAG 115
Query: 61 SQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKL 120
+ A + N + ++C + N + A L
Sbjct: 116 DMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNL 175
Query: 121 AS-YLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPN 179
+ + + +I KA+TL+P++L Y + +++ D A+A Y + L L PN
Sbjct: 176 GCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPN 235
Query: 180 NRDAY 184
+ +
Sbjct: 236 HAVVH 240
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey
(Saimiri boliviensis) [TaxId: 27679]}
Length = 168
Score = 60.0 bits (144), Expect = 5e-12
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Query: 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANR----SAAL 117
+KLEQ A +K++G F+ ++ +++ +Y + + +S A+ +A L
Sbjct: 10 EKLEQ-AAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFL 68
Query: 118 EKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELD 177
YL L + +++ C KA+ L+ + K RR ++ + A D++K+LE++
Sbjct: 69 NLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN 128
Query: 178 PNNRDAY 184
P N+ A
Sbjct: 129 PQNKAAR 135
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl
isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Length = 153
Score = 58.5 bits (140), Expect = 1e-11
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKL----- 120
Q+A +K+EGN F+ N+ +E++ KY EAL + + +
Sbjct: 15 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLA 74
Query: 121 ASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNN 180
Y + ++I SK + ++ + +K + L+EA + K L+PNN
Sbjct: 75 TCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN 134
Query: 181 RDAY 184
D
Sbjct: 135 LDIR 138
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 54.7 bits (130), Expect = 5e-10
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYA----NRSAAL 117
+KLEQ + +K+ G F+ ++ ++L +Y + + S S ++ L
Sbjct: 8 EKLEQ-STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHL 66
Query: 118 EKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELD 177
+L L+ +I +C+KA+ L+ + K RR + + + A AD+QK+L+L
Sbjct: 67 NLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLY 126
Query: 178 PNNRDAY 184
PNN+ A
Sbjct: 127 PNNKAAK 133
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 128
Score = 53.3 bits (127), Expect = 6e-10
Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 4/115 (3%)
Query: 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLS 125
+ A+ K+ GN ++ + +L Y++A P + + + EK
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTY----ITNQAAVYFEKGDYNKC 57
Query: 126 LEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNN 180
E +++I + K Y R Y + +K +A+ Y K L
Sbjct: 58 RELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTP 112
Score = 24.8 bits (53), Expect = 6.3
Identities = 10/29 (34%), Positives = 11/29 (37%)
Query: 156 LYQQSDKLDEALADYQKILELDPNNRDAY 184
+ D AL Y K ELDP N
Sbjct: 13 DAYKKKDFDTALKHYDKAKELDPTNMTYI 41
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus)
[TaxId: 9913]}
Length = 169
Score = 52.8 bits (125), Expect = 2e-09
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 62 QKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYA-----NRSAA 116
K+ + LK+ GN F+ W ++ KY + LR S + + A S
Sbjct: 21 DKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCV 80
Query: 117 LEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILEL 176
L A L + ++ +C +A+ ++PS K RRA+ +Q + D+ALAD +K E+
Sbjct: 81 LNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI 140
Query: 177 DPNNRDAY 184
P ++
Sbjct: 141 APEDKAIQ 148
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Length = 117
Score = 50.0 bits (118), Expect = 7e-09
Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLS 125
+ LK++GN + ++L Y+EA++ P + + A
Sbjct: 1 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKK---------- 50
Query: 126 LEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
++ K + L P + K Y R+A + ++ +EA Y++ L+ + NN
Sbjct: 51 -GDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLK 108
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 264
Score = 50.8 bits (121), Expect = 3e-08
Identities = 10/65 (15%), Positives = 21/65 (32%)
Query: 122 SYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNR 181
+ LS + Q++ +AI +P + L + A + ++L P
Sbjct: 5 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 64
Query: 182 DAYVA 186
Sbjct: 65 PGASQ 69
Score = 35.0 bits (80), Expect = 0.005
Identities = 4/34 (11%), Positives = 13/34 (38%)
Query: 153 RARLYQQSDKLDEALADYQKILELDPNNRDAYVA 186
+ + +L +AL + ++ P + +
Sbjct: 2 QWKNALSEGQLQQALELLIEAIKASPKDASLRSS 35
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 49.8 bits (118), Expect = 3e-08
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 14/113 (12%)
Query: 68 AISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLE 127
AISL +EG W +L ++ + N Y L+
Sbjct: 5 AISLWNEGVLAADKKDWKGALDAFSAVQD--------PHSRICFNIGCM------YTILK 50
Query: 128 KPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNN 180
++ A +++I + Y +R LY Q++K D A+ D ++ L N
Sbjct: 51 NMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGN 103
Score = 44.1 bits (103), Expect = 3e-06
Identities = 13/116 (11%), Positives = 32/116 (27%), Gaps = 5/116 (4%)
Query: 75 GNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVF-----YANRSAALEKLASYLSLEKP 129
G L +E+ + ++ A++ L L +
Sbjct: 43 GCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRG 102
Query: 130 DQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYV 185
+Q I + +V A +Y + ++ +A + R + +
Sbjct: 103 NQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKI 158
Score = 30.2 bits (67), Expect = 0.12
Identities = 24/173 (13%), Positives = 48/173 (27%), Gaps = 27/173 (15%)
Query: 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLE 65
+ + + I IL + + R F + ++K +
Sbjct: 28 FSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYD 87
Query: 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLS 125
AI E R NQ + L+ +C V N + Y
Sbjct: 88 L-AIKDLKEALIQLRGNQL---IDYKILGLQFKLFACEV-----LYNIAFM------YAK 132
Query: 126 LEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDP 178
E+ ++ + A ++ + K+D+A+ K +P
Sbjct: 133 KEEWKKAEEQLALATSMKSE------------PRHSKIDKAMECVWKQKLYEP 173
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase
alpha-subunit, N-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 334
Score = 49.6 bits (117), Expect = 8e-08
Identities = 18/188 (9%), Positives = 47/188 (25%), Gaps = 15/188 (7%)
Query: 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLE 65
+ L + + + F+ + + + + Y C
Sbjct: 132 CARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLP-- 189
Query: 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANR---------SAA 116
L + ++ + L K E +++ + ++ ++ +R
Sbjct: 190 ----QLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPLFRC 245
Query: 117 LEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILEL 176
+ L+ +S + N L R E L + + +
Sbjct: 246 ELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAV 305
Query: 177 DPNNRDAY 184
DP
Sbjct: 306 DPMRAAYL 313
Score = 33.8 bits (76), Expect = 0.013
Identities = 11/82 (13%), Positives = 28/82 (34%), Gaps = 10/82 (12%)
Query: 113 RSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQ----------SDK 162
+SA + E + + S+ + NP + ++ R + Q +
Sbjct: 29 QSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAAL 88
Query: 163 LDEALADYQKILELDPNNRDAY 184
+ L + L ++P + +
Sbjct: 89 VKAELGFLESCLRVNPKSYGTW 110
Score = 33.8 bits (76), Expect = 0.015
Identities = 11/108 (10%), Positives = 24/108 (22%), Gaps = 11/108 (10%)
Query: 56 FYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSA 115
FY + + L ES + E +
Sbjct: 230 FYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPENKWC-----LLTIILLMR 284
Query: 116 ALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKL 163
AL+ L +++ S ++P + + +
Sbjct: 285 ALDPLLYE------KETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSV 326
Score = 28.8 bits (63), Expect = 0.49
Identities = 7/39 (17%), Positives = 14/39 (35%)
Query: 146 YLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
Y Q + Q + + L +IL +P+ +
Sbjct: 28 YQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLW 66
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 159
Score = 47.4 bits (111), Expect = 2e-07
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLS 125
+ A LK + N F+ + ++ Y++A+ P + A
Sbjct: 8 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRT---------- 57
Query: 126 LEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
E ++ ++AI L+ Y+K Y RRA K AL DY+ ++++ P+++DA
Sbjct: 58 -ECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAK 115
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 48.6 bits (115), Expect = 2e-07
Identities = 15/117 (12%), Positives = 29/117 (24%), Gaps = 13/117 (11%)
Query: 68 AISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLE 127
+ G + S + + + + C V R
Sbjct: 120 RVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYR-------------N 166
Query: 128 KPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
+ Q+ A L PS + Y + A L + Y + + + A
Sbjct: 167 QTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAAS 223
Score = 40.9 bits (95), Expect = 7e-05
Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 3/54 (5%)
Query: 131 QSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
QS +A L A ++ L + YQK+L D
Sbjct: 4 QSAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDL---YQKMLVTDLEYALDK 54
Score = 26.7 bits (58), Expect = 2.5
Identities = 9/77 (11%), Positives = 20/77 (25%), Gaps = 5/77 (6%)
Query: 123 YLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRD 182
+ S + K + + Y + L+ + Q + N
Sbjct: 30 WTSRQALQD---LYQKMLVTDLEYALDKKVEQDLWNH--AFKNQITTLQGQAKNRANPNR 84
Query: 183 AYVATKVSPDLKLKEKN 199
+ V +S L+
Sbjct: 85 SEVQANLSLFLEAASGF 101
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase
alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 315
Score = 43.0 bits (100), Expect = 1e-05
Identities = 18/166 (10%), Positives = 49/166 (29%), Gaps = 6/166 (3%)
Query: 20 IYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNALF 79
+ + I+ + H+ + + F + + + + +
Sbjct: 98 MNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQ 157
Query: 80 RLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILACSKA 139
W L ++ L+ R+ + R + Y ++ + +
Sbjct: 158 EFKLWDNELQYVDQLLKEDVRN-----NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEM 212
Query: 140 ITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYV 185
I L P + + Q L + ++L+L P++ Y+
Sbjct: 213 IKLVPHNESAWNYLKGILQDR-GLSKYPNLLNQLLDLQPSHSSPYL 257
Score = 41.9 bits (97), Expect = 3e-05
Identities = 8/47 (17%), Positives = 19/47 (40%)
Query: 138 KAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
I + + VY + Q+ ++ + A + +EL+ N +
Sbjct: 34 VQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVW 80
Score = 36.1 bits (82), Expect = 0.002
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 121 ASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDK-LDEALADYQKILELDPN 179
A E+ +++ AI LN + V+ R L + K L E + I+E P
Sbjct: 51 AVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK 110
Query: 180 NRDAY 184
N +
Sbjct: 111 NYQVW 115
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 42.1 bits (97), Expect = 2e-05
Identities = 16/187 (8%), Positives = 43/187 (22%), Gaps = 8/187 (4%)
Query: 6 YQQELSKNPSFLYTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLE 65
+ Q L+ P + L + + + L
Sbjct: 60 FSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGG 119
Query: 66 QTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEK------ 119
+ ++ D A + + + +S +
Sbjct: 120 RDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVE 179
Query: 120 --LASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELD 177
L + ++ + +L + + Y LD A A ++ + +
Sbjct: 180 FYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANN 239
Query: 178 PNNRDAY 184
+N +
Sbjct: 240 VHNFVEH 246
Score = 31.3 bits (69), Expect = 0.071
Identities = 7/50 (14%), Positives = 17/50 (34%)
Query: 135 ACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
+ + ++ R LY A D+ + L + P+ + +
Sbjct: 25 ILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVF 74
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 42.3 bits (98), Expect = 2e-05
Identities = 13/111 (11%), Positives = 36/111 (32%), Gaps = 11/111 (9%)
Query: 75 GNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSIL 134
+ Q+ E+ Y++ ++S + ++ L L+ +
Sbjct: 165 ADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGL----CQLAATDAVAAAR 220
Query: 135 ACSKAITLNPSYLKVYQRR-------ARLYQQSDKLDEALADYQKILELDP 178
+ + +P++ + A S++L E ++ + LD
Sbjct: 221 TLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDK 271
Score = 29.6 bits (65), Expect = 0.32
Identities = 12/119 (10%), Positives = 27/119 (22%), Gaps = 2/119 (1%)
Query: 68 AISLKDEGNALFRLNQWSESLAKYNEALRSCPRS--CSVSRAVFYANRSAALEKLASYLS 125
+ + ++ A++ + L Y
Sbjct: 77 GNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAK 136
Query: 126 LEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
+ K + + A L + EA Y K+++ NR +
Sbjct: 137 AIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195
Score = 29.2 bits (64), Expect = 0.35
Identities = 17/132 (12%), Positives = 39/132 (29%), Gaps = 7/132 (5%)
Query: 52 FHVLFYLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRS-CSVSRAVFY 110
F LF S K E+ A + + + + +A ++ Y
Sbjct: 21 FMKLFSGSDSYKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTY 80
Query: 111 ANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADY 170
+ S ++ + AI + + + ++ + L+ L DY
Sbjct: 81 VEAYKC------FKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDY 134
Query: 171 QKILELDPNNRD 182
K ++ +
Sbjct: 135 AKAIDCYELAGE 146
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 122
Score = 40.5 bits (94), Expect = 2e-05
Identities = 13/111 (11%), Positives = 30/111 (27%), Gaps = 10/111 (9%)
Query: 76 NALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLEKPDQSILA 135
N L + + K+ + S S + + + I+
Sbjct: 7 NELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTR--------YNDDIRKGIVL 58
Query: 136 CSKA--ITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAY 184
+ A + + ++AL + +L+ +P N A
Sbjct: 59 LEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAK 109
Score = 28.5 bits (63), Expect = 0.27
Identities = 5/86 (5%), Positives = 21/86 (24%), Gaps = 4/86 (4%)
Query: 78 LFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLA-SYLSLEKPDQSILAC 136
+ + + + + LA L++ ++++
Sbjct: 39 YAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRD---YVFYLAVGNYRLKEYEKALKYV 95
Query: 137 SKAITLNPSYLKVYQRRARLYQQSDK 162
+ P + + + + K
Sbjct: 96 RGLLQTEPQNNQAKELERLIDKAMKK 121
Score = 24.7 bits (53), Expect = 6.0
Identities = 6/71 (8%), Positives = 17/71 (23%), Gaps = 3/71 (4%)
Query: 118 EKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLY---QQSDKLDEALADYQKIL 174
L +S+E + A + +D + + + +++L
Sbjct: 4 AVLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELL 63
Query: 175 ELDPNNRDAYV 185
Sbjct: 64 PKGSKEEQRDY 74
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1
(PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Length = 323
Score = 41.3 bits (95), Expect = 5e-05
Identities = 19/192 (9%), Positives = 46/192 (23%), Gaps = 25/192 (13%)
Query: 18 YTIYFSCFILFILFSEIRTDCHQFERQVFYIQFIFHVLFYLFCSQKLEQTAISLKDEGNA 77
+ ++ + R + L K +
Sbjct: 86 NQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGS 145
Query: 78 LFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKL----------------- 120
L + + E + A+R P S +
Sbjct: 146 LLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPND 205
Query: 121 --------ASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQK 172
A+ + + ++++ A +A+ L P Y++ EA+ + +
Sbjct: 206 YLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLE 265
Query: 173 ILELDPNNRDAY 184
L + +R
Sbjct: 266 ALNMQRKSRGPR 277
Score = 39.4 bits (90), Expect = 2e-04
Identities = 9/66 (13%), Positives = 27/66 (40%)
Query: 110 YANRSAALEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALAD 169
+ E+ L ++L A+ +P +++ +Q ++++ A++
Sbjct: 16 LRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISA 75
Query: 170 YQKILE 175
++ LE
Sbjct: 76 LRRCLE 81
Score = 34.4 bits (77), Expect = 0.008
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 153 RARLYQQSDKLDEALADYQKILELDPNNRDAY 184
Q L A+ ++ ++ DP + +A+
Sbjct: 25 EGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAW 56
Score = 34.4 bits (77), Expect = 0.009
Identities = 15/128 (11%), Positives = 33/128 (25%), Gaps = 11/128 (8%)
Query: 57 YLFCSQKLEQTAISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAA 116
Y F + + +EG + ++ + A++ P+ +
Sbjct: 8 YQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH-----MEAWQYLGTT 62
Query: 117 LEKLASYLSLEKPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILEL 176
E+ +I A + + L P A + +A + L
Sbjct: 63 ------QAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRY 116
Query: 177 DPNNRDAY 184
P
Sbjct: 117 TPAYAHLV 124
Score = 26.7 bits (57), Expect = 2.2
Identities = 5/64 (7%), Positives = 17/64 (26%), Gaps = 11/64 (17%)
Query: 123 YLSLEKPDQSILACSKAITLNPS-----------YLKVYQRRARLYQQSDKLDEALADYQ 171
++L +++ +A+ + ++ + D A
Sbjct: 250 CINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADA 309
Query: 172 KILE 175
+ L
Sbjct: 310 RDLS 313
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III
{Escherichia coli [TaxId: 562]}
Length = 366
Score = 38.4 bits (87), Expect = 4e-04
Identities = 12/115 (10%), Positives = 33/115 (28%), Gaps = 1/115 (0%)
Query: 68 AISLKDEGNALFRLNQWSESLAKYNEALRSCPRSCSVSRAVFYANRSAALEKLASYLSLE 127
+ + K + + + + + N + A L + E
Sbjct: 213 SNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA-NNHFLQGQWRNIARAQILLGEFEPAE 271
Query: 128 KPDQSILACSKAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRD 182
+ + ++++ L + +LY Q+ + +A L+L
Sbjct: 272 IVLEELNENARSLRLMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANRTGF 326
Score = 33.4 bits (74), Expect = 0.020
Identities = 10/50 (20%), Positives = 16/50 (32%)
Query: 138 KAITLNPSYLKVYQRRARLYQQSDKLDEALADYQKILELDPNNRDAYVAT 187
K I + + + RA++ DEA + LE P
Sbjct: 3 KDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIV 52
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit
tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 145
Score = 27.5 bits (59), Expect = 0.96
Identities = 4/30 (13%), Positives = 8/30 (26%)
Query: 73 DEGNALFRLNQWSESLAKYNEALRSCPRSC 102
D R+ + + +S P
Sbjct: 2 DTETEFDRILLFEQIRQDAENTYKSNPLDA 31
Score = 26.0 bits (55), Expect = 3.0
Identities = 3/28 (10%), Positives = 11/28 (39%)
Query: 157 YQQSDKLDEALADYQKILELDPNNRDAY 184
+ + ++ D + + +P + D
Sbjct: 7 FDRILLFEQIRQDAENTYKSNPLDADNL 34
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium
tepidum [TaxId: 1097]}
Length = 156
Score = 25.9 bits (55), Expect = 3.9
Identities = 7/40 (17%), Positives = 15/40 (37%)
Query: 153 RARLYQQSDKLDEALADYQKILELDPNNRDAYVATKVSPD 192
A+ + + DEA A+ ++ +E+ D
Sbjct: 15 DAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFD 54
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 124
Score = 24.3 bits (53), Expect = 9.6
Identities = 4/30 (13%), Positives = 9/30 (30%)
Query: 154 ARLYQQSDKLDEALADYQKILELDPNNRDA 183
+ + A + E + NN+
Sbjct: 80 TIGCYKLGEYSMAKRYVDTLFEHERNNKQV 109
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.397
Gapped
Lambda K H
0.267 0.0535 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 838,499
Number of extensions: 37143
Number of successful extensions: 188
Number of sequences better than 10.0: 1
Number of HSP's gapped: 155
Number of HSP's successfully gapped: 62
Length of query: 229
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 147
Effective length of database: 1,281,736
Effective search space: 188415192
Effective search space used: 188415192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.9 bits)