Query psy13017
Match_columns 74
No_of_seqs 101 out of 1003
Neff 4.4
Searched_HMMs 29240
Date Fri Aug 16 17:15:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13017.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13017hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p6h_A Hypothetical protein; s 99.9 2E-28 6.7E-33 165.8 7.0 52 2-54 83-134 (134)
2 1ve0_A Hypothetical protein (S 99.9 2.7E-28 9.3E-33 165.1 7.0 52 2-54 83-134 (134)
3 2p6c_A AQ_2013 protein; NPPSFA 99.9 3.1E-28 1.1E-32 165.3 6.4 52 2-54 86-137 (137)
4 1vmj_A Hypothetical protein TM 99.9 7.6E-28 2.6E-32 166.2 7.2 52 2-54 100-151 (151)
5 1vmf_A Hypothetical protein; s 99.9 9.6E-28 3.3E-32 164.9 7.2 52 2-54 93-145 (145)
6 1vph_A Hypothetical protein SS 99.9 2.9E-27 9.9E-32 163.1 6.3 52 2-54 97-149 (149)
7 2cu5_A Conserved hypothetical 99.9 3.4E-27 1.2E-31 159.2 6.4 50 2-52 80-129 (129)
8 1vmh_A Uncharacterized conserv 99.9 1.1E-26 3.8E-31 159.4 6.7 50 2-52 95-144 (144)
9 2rfw_A Cellulose 1,4-beta-cell 48.4 13 0.00045 29.1 3.1 35 10-44 121-156 (430)
10 1eg1_A Endoglucanase I; mutati 46.4 14 0.00049 28.4 2.9 35 10-44 122-157 (371)
11 1gpi_A Exoglucanase I; hydrola 45.5 14 0.00049 28.9 2.9 35 10-44 118-153 (431)
12 2ovw_A Endoglucanase I; glycos 44.5 14 0.00049 28.8 2.7 34 10-43 121-155 (411)
13 2v3i_A Exoglucanase 1; hydrola 43.5 14 0.00047 29.0 2.5 34 11-44 122-156 (434)
14 2xsp_A Cellulose 1,4-beta-cell 43.3 14 0.00048 29.1 2.5 35 10-44 123-158 (440)
15 3fm2_A Uncharacterized protein 40.1 35 0.0012 22.2 3.7 33 21-53 57-90 (135)
16 3f7w_A Putative fructosamine-3 34.8 71 0.0024 21.2 4.8 46 1-52 2-47 (288)
17 3pfz_A Cellobiohydrolase 1 cat 32.4 26 0.0009 27.5 2.5 30 10-39 118-147 (437)
18 1ojj_A Endoglucanase I; hydrol 27.9 40 0.0014 26.2 2.8 30 10-39 123-152 (402)
19 2qmx_A Prephenate dehydratase; 27.0 32 0.0011 24.8 2.0 15 28-42 239-253 (283)
20 3luy_A Probable chorismate mut 24.6 37 0.0013 25.1 2.0 27 28-54 247-285 (329)
21 2lcd_A AT-rich interactive dom 29.7 16 0.00056 24.0 0.0 50 5-54 51-108 (118)
22 3mwb_A Prephenate dehydratase; 23.4 41 0.0014 24.7 2.0 27 28-54 241-279 (313)
23 4hcz_A PHD finger protein 1; p 21.5 67 0.0023 18.6 2.3 28 13-40 7-40 (58)
24 3hi2_B Motility quorum-sensing 21.3 38 0.0013 21.5 1.3 22 28-53 68-89 (101)
25 2nms_A CMRF35-like-molecule 1; 21.3 70 0.0024 18.9 2.5 24 31-54 87-112 (124)
26 2qmw_A PDT, prephenate dehydra 20.8 59 0.002 23.2 2.4 15 28-43 228-242 (267)
No 1
>2p6h_A Hypothetical protein; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.95A {Aeropyrum pernix}
Probab=99.95 E-value=2e-28 Score=165.78 Aligned_cols=52 Identities=31% Similarity=0.540 Sum_probs=50.5
Q ss_pred CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017 2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV 54 (74)
Q Consensus 2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge 54 (74)
||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++||
T Consensus 83 n~~AHiks~l~G~s~tipv~~G~L~LGtWQ~Iyl~E~d-g~r~R~v~v~i~Ge 134 (134)
T 2p6h_A 83 NAHAHLGNTIIGDSRVIPVVGGRLSLGTWQRILFVEMD-GPRERTVNLLYLGE 134 (134)
T ss_dssp CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CSCEEEEEEEEEEC
T ss_pred CHHHhhhhhhcCCeEEEEEECCEECcCCCceEEEEECC-CCCceEEEEEEecC
Confidence 89999999999999999999999999999999999997 79999999999996
No 2
>1ve0_A Hypothetical protein (ST2072); structural genomics, zinc binding protein, metal binding Pro; 2.00A {Sulfolobus tokodaii}
Probab=99.95 E-value=2.7e-28 Score=165.09 Aligned_cols=52 Identities=38% Similarity=0.613 Sum_probs=50.4
Q ss_pred CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017 2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV 54 (74)
Q Consensus 2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge 54 (74)
||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++||
T Consensus 83 n~~AHiks~l~G~s~tipV~~G~L~LGtWQ~Iyl~E~d-g~r~R~v~v~i~Ge 134 (134)
T 1ve0_A 83 NGHAHVISAIIGNSRVVPIIEGKLDLGTWQRIILLEFD-GPRTRTVLVKSMGE 134 (134)
T ss_dssp CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CSCEEEEEEEEEEC
T ss_pred ChHHhhhhhccCCcEEEEEECCEeccCCCcEEEEEECC-CCCeeEEEEEEecC
Confidence 89999999999999999999999999999999999996 78999999999996
No 3
>2p6c_A AQ_2013 protein; NPPSFA, national project on protein structural and functiona analyses, riken structural genomics/proteomics initiative; 2.00A {Aquifex aeolicus}
Probab=99.95 E-value=3.1e-28 Score=165.29 Aligned_cols=52 Identities=31% Similarity=0.597 Sum_probs=50.6
Q ss_pred CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017 2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV 54 (74)
Q Consensus 2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge 54 (74)
||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++||
T Consensus 86 n~~AHiks~l~G~s~tipv~~G~L~LGtWQ~Iyl~E~d-g~r~R~v~v~i~Ge 137 (137)
T 2p6c_A 86 NGDAHLKNLLTHLQVVLPITNGKLDLGPWQEIFYAEFD-GQRPKRVVIKIIGE 137 (137)
T ss_dssp CHHHHHHHHHHCSEEEEEECSSSBCCCSSCEEEEEESS-CSSCEEEEEEEEEC
T ss_pred CHHHhhhhheeCCeEEEEEECCEECcCCCceEEEEECC-CCCccEEEEEEecC
Confidence 89999999999999999999999999999999999998 78999999999996
No 4
>1vmj_A Hypothetical protein TM0723; putative thiamin phosphate synthase, structural genomics, JO center for structural genomics, JCSG; 1.52A {Thermotoga maritima} SCOP: d.273.1.1
Probab=99.94 E-value=7.6e-28 Score=166.15 Aligned_cols=52 Identities=27% Similarity=0.585 Sum_probs=50.6
Q ss_pred CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEecc
Q psy13017 2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLNGV 54 (74)
Q Consensus 2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~Ge 54 (74)
||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++||
T Consensus 100 n~~AHiKssL~G~S~tiPV~~GrL~LGtWQgIyl~E~d-g~r~R~V~v~i~Ge 151 (151)
T 1vmj_A 100 NADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEFD-GMRPKRVLVKIIGE 151 (151)
T ss_dssp CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CSSCEEEEEEEEEC
T ss_pred chHhhhhhhhcCCeEEEEEECCEECcCCCcEEEEEECC-CCCeeEEEEEEecC
Confidence 89999999999999999999999999999999999996 89999999999996
No 5
>1vmf_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, unknown function; HET: EPE; 1.46A {Bacillus halodurans} SCOP: d.273.1.1
Probab=99.94 E-value=9.6e-28 Score=164.86 Aligned_cols=52 Identities=40% Similarity=0.722 Sum_probs=50.3
Q ss_pred CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCC-ceEEEEEEecc
Q psy13017 2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAG-SRKLVVTLNGV 54 (74)
Q Consensus 2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr-~R~v~v~v~Ge 54 (74)
||+|||||+|+|+|++|||.||+|.|||||+||||||| +|| +|+|+++++||
T Consensus 93 n~~AHiKssL~G~S~tiPV~~GrL~LGtWQgIyl~E~d-gpr~~R~v~v~i~Ge 145 (145)
T 1vmf_A 93 NTAAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFD-GPRTNRKFVVKLLTD 145 (145)
T ss_dssp CHHHHHHHHHHCSEEEEEEETTEECCCTTEEEEEEESS-CCCSCEEEEEEEEEC
T ss_pred CHHHHHHHHhhCCeEEEEEECCEEccCCCceEEEEECc-CCCCCcEEEEEEecC
Confidence 89999999999999999999999999999999999998 788 89999999996
No 6
>1vph_A Hypothetical protein SSO2532; YBJQ-like fold, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; 1.76A {Sulfolobus solfataricus} SCOP: d.273.1.1
Probab=99.94 E-value=2.9e-27 Score=163.05 Aligned_cols=52 Identities=37% Similarity=0.645 Sum_probs=49.6
Q ss_pred CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCC-ceEEEEEEecc
Q psy13017 2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAG-SRKLVVTLNGV 54 (74)
Q Consensus 2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr-~R~v~v~v~Ge 54 (74)
||+|||||+|+|+|++|||.||+|.|||||+||||||| ++| +|+|+++++||
T Consensus 97 n~~AHiKssL~G~S~tiPV~~G~L~LGtWQgIyl~E~d-g~r~~R~v~v~i~Ge 149 (149)
T 1vph_A 97 NAHAHLGATFLGAERVFPVREGKLVRGTWQNIFLVELD-GPRSERHITVEILGE 149 (149)
T ss_dssp CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CCEEEEEEEEEEEEC
T ss_pred CHHHhhhhhhcCCeEEEEEECCEECcCCCcEEEEEECC-CCCCCeEEEEEEecC
Confidence 89999999999999999999999999999999999998 565 89999999996
No 7
>2cu5_A Conserved hypothetical protein TT1486; thermus thermophilus HB8, ST genomics, riken structural genomics/proteomics initiative; 1.84A {Thermus thermophilus}
Probab=99.94 E-value=3.4e-27 Score=159.23 Aligned_cols=50 Identities=32% Similarity=0.529 Sum_probs=48.2
Q ss_pred CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEe
Q psy13017 2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLN 52 (74)
Q Consensus 2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~ 52 (74)
||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++
T Consensus 80 n~~AHiks~L~G~s~tiPV~~G~L~LGtWQ~Iyl~E~d-g~r~R~v~v~i~ 129 (129)
T 2cu5_A 80 NSHAHLKSLLTGVHLLLLAEKGRLRLGRWQQVFLAEFD-GPRVREVWVRLL 129 (129)
T ss_dssp CHHHHHHHHHHCSEEEEEEETTEECCCTTCEEEEEESS-CSEEEEEEEEEC
T ss_pred CHHHHHHHHhhCCeEEEEEECCEECcCCCcEEEEEECC-CCceeEEEEEEC
Confidence 89999999999999999999999999999999999997 899999999985
No 8
>1vmh_A Uncharacterized conserved protein YJBQ/UPF0047 FA ortholog YUGU B.subtilis; YJBQ-like fold, structural genomics; 1.31A {Clostridium acetobutylicum} SCOP: d.273.1.1 PDB: 1xbf_A
Probab=99.93 E-value=1.1e-26 Score=159.43 Aligned_cols=50 Identities=44% Similarity=0.733 Sum_probs=48.1
Q ss_pred CchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEe
Q psy13017 2 ELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLN 52 (74)
Q Consensus 2 d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~ 52 (74)
||+|||||+|+|+|++|||.||+|.|||||+||||||| +||+|+|+++++
T Consensus 95 n~~AHikssL~G~S~tiPV~~GrL~LGtWQgIyl~E~d-gpr~R~v~v~i~ 144 (144)
T 1vmh_A 95 NSHAHIKASLMGSSQQIIIENGKLKLGTWQGIYFTEFD-GPRDRKVFVKII 144 (144)
T ss_dssp CHHHHHHHHHHCSEEEEEEETTEECCCTTEEEEEEESS-CSCEEEEEEEEC
T ss_pred CchHHHHHHhhCCeEEEEEECCEECcCCCcEEEEEECC-CCceeEEEEEEC
Confidence 89999999999999999999999999999999999997 799999999985
No 9
>2rfw_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycosidase; 1.60A {Melanocarpus albomyces} PDB: 2rfy_A* 2rfz_A* 2rg0_A*
Probab=48.44 E-value=13 Score=29.12 Aligned_cols=35 Identities=11% Similarity=0.315 Sum_probs=30.0
Q ss_pred hhcCCceEEEeeCCEecccCcceEEEEEcC-CCCCc
Q psy13017 10 CFLGSSLTIPISDGKLNLGMWQGIWLCEHR-DQAGS 44 (74)
Q Consensus 10 sL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd-~gpr~ 44 (74)
-|+|+..++-|.=-+|-.|--..+||+|.+ +|.+.
T Consensus 121 ~L~~~EftFDVDvS~lpCGlNgALYf~eM~adGG~s 156 (430)
T 2rfw_A 121 NLMGNELAFDVDLSTVECGINSALYFVAMEEDGGMA 156 (430)
T ss_dssp CCTTEEEEEEEECTTCCTTCCCEEEEECCCTTTTTT
T ss_pred EecCceeEEEeecccCCcccCCceeEEeecCCCCcc
Confidence 378999999999999999999999999987 34433
No 10
>1eg1_A Endoglucanase I; mutation, cellulose degradation; HET: NAG; 3.60A {Hypocrea jecorina} SCOP: b.29.1.10
Probab=46.37 E-value=14 Score=28.41 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=30.0
Q ss_pred hhcCCceEEEeeCCEecccCcceEEEEEcC-CCCCc
Q psy13017 10 CFLGSSLTIPISDGKLNLGMWQGIWLCEHR-DQAGS 44 (74)
Q Consensus 10 sL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd-~gpr~ 44 (74)
-|+|+..++-|.=-+|-.|--..+||+|.+ +|.+.
T Consensus 122 ~L~~~EftFdVD~S~lpCGlNgALYf~eM~adGG~~ 157 (371)
T 1eg1_A 122 KLNGQELSFDVDLSALPCGENGSLYLSQMDENGGAN 157 (371)
T ss_dssp CCTTSEEEEEECTTSCCTTEEEEEEEECCCTTTTCC
T ss_pred EecCceeEEEeeccCCCcccccceeEEEecCCCCcc
Confidence 378999999999999999999999999987 34443
No 11
>1gpi_A Exoglucanase I; hydrolase, glycosidase, cellulase, beta-glucanase, glycoprotein, cellulose degradation, enzyme, reaction center; HET: NAG; 1.32A {Phanerochaete chrysosporium} SCOP: b.29.1.10 PDB: 1h46_X* 1z3t_A* 1z3v_A* 1z3w_A*
Probab=45.52 E-value=14 Score=28.93 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=29.8
Q ss_pred hhcCCceEEEeeCCEecccCcceEEEEEcC-CCCCc
Q psy13017 10 CFLGSSLTIPISDGKLNLGMWQGIWLCEHR-DQAGS 44 (74)
Q Consensus 10 sL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd-~gpr~ 44 (74)
-|+|+..++-|.=-+|-.|--..+||+|.+ +|.+.
T Consensus 118 ~L~~~EftFdVDvS~lpCGlNgALYf~eM~adGG~~ 153 (431)
T 1gpi_A 118 KLLNQEFTFDVDMSNLPCGLNGALYLSAMDADGGMS 153 (431)
T ss_dssp CCTTEEEEEEEECTTCCTTCEEEEEEECCCTTTTTT
T ss_pred EecCceeEEEeecccCCcccccceeEEeeccCCCcc
Confidence 378999999999999999999999999987 34433
No 12
>2ovw_A Endoglucanase I; glycosyl hydrolase, complexed with cellobio glycosylated protein, hydrolase; HET: NAG CBI; 2.30A {Fusarium oxysporum} SCOP: b.29.1.10 PDB: 3ovw_A* 4ovw_A* 1ovw_A*
Probab=44.46 E-value=14 Score=28.76 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=29.1
Q ss_pred hhcCCceEEEeeCCEecccCcceEEEEEcC-CCCC
Q psy13017 10 CFLGSSLTIPISDGKLNLGMWQGIWLCEHR-DQAG 43 (74)
Q Consensus 10 sL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd-~gpr 43 (74)
-|+|+..++-|.=-+|-.|-...+||+|.+ +|.+
T Consensus 121 ~L~~~EftFDVD~S~lpCGlNgALYf~eM~adGG~ 155 (411)
T 2ovw_A 121 HLTGTEFSFDVEMEKLPCGMNGALYLSEMPQDGGK 155 (411)
T ss_dssp CCTTCEEEEEEECTTCCTTEEEEEEEECCCTTTTG
T ss_pred EecCceeEEEeeccCCCcccccceeEEEecCCCCc
Confidence 378999999999999999999999999987 3443
No 13
>2v3i_A Exoglucanase 1; hydrolase, glycosidase, glycoprotein, carbohydrate metabolism, polysaccharide degradation, pyrrolidone carboxylic acid; HET: NAG XX6; 1.05A {Hypocrea jecorina} SCOP: b.29.1.10 PDB: 1dy4_A* 1cel_A* 2v3r_A* 7cel_A* 6cel_A* 3cel_A* 2cel_A* 5cel_A* 4cel_A* 1q2b_A* 1egn_A* 1q2e_A* 2y9l_A* 2y9n_A*
Probab=43.51 E-value=14 Score=29.05 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=29.4
Q ss_pred hcCCceEEEeeCCEecccCcceEEEEEcC-CCCCc
Q psy13017 11 FLGSSLTIPISDGKLNLGMWQGIWLCEHR-DQAGS 44 (74)
Q Consensus 11 L~G~SltiPV~dG~L~LGtWQ~Iyl~Efd-~gpr~ 44 (74)
|+|+..++-|.=-+|-.|--..+||+|.+ +|.+.
T Consensus 122 L~~~EftFdVDvS~lpCGlNgALYf~eM~adGG~~ 156 (434)
T 2v3i_A 122 LLGNEFSFDVDVSQLPCGLNGALYFVSMDADGGVS 156 (434)
T ss_dssp CTTEEEEEEEECTTCCTTEEEEEEEECCCTTTTTT
T ss_pred ecCceeEEEeecccCCcccCCceeEEeecCCCCcc
Confidence 78999999999999999999999999987 34433
No 14
>2xsp_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase; HET: NAG EPE XYS; 1.70A {Heterobasidion annosum} PDB: 2yg1_A*
Probab=43.28 E-value=14 Score=29.07 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=29.8
Q ss_pred hhcCCceEEEeeCCEecccCcceEEEEEcC-CCCCc
Q psy13017 10 CFLGSSLTIPISDGKLNLGMWQGIWLCEHR-DQAGS 44 (74)
Q Consensus 10 sL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd-~gpr~ 44 (74)
-|+|+..++-|.=-+|-.|--..+||+|.+ +|.+.
T Consensus 123 ~L~~~EftFdVDvS~lpCGlNgALYf~eM~adGG~s 158 (440)
T 2xsp_A 123 KLKNQEFAFDVDMSNLPCGLNGALYFVEMDADGGLS 158 (440)
T ss_dssp CCTTEEEEEEEECTTCCTTEEEEEEEECCCTTTTTT
T ss_pred EecCceeEEEeecccCCcccccceeEEeecCCCCcc
Confidence 378999999999999999999999999987 34433
No 15
>3fm2_A Uncharacterized protein, distantly related to A H binding/degrading HEMS (PF05171)...; structural genomics; HET: MSE; 1.80A {Anabaena variabilis atcc 29413}
Probab=40.12 E-value=35 Score=22.21 Aligned_cols=33 Identities=9% Similarity=0.088 Sum_probs=22.1
Q ss_pred eCCEecccCcceEEEEEcCCCCCc-eEEEEEEec
Q psy13017 21 SDGKLNLGMWQGIWLCEHRDQAGS-RKLVVTLNG 53 (74)
Q Consensus 21 ~dG~L~LGtWQ~Iyl~Efd~gpr~-R~v~v~v~G 53 (74)
.|++|-+..|..+||++-...... .+.-+++..
T Consensus 57 idlrlf~~~w~~~~~v~~~~~~G~~~~~SiqFFD 90 (135)
T 3fm2_A 57 FEFHLNMEKITQVKFETGEAKRGNFTTYAIRFLD 90 (135)
T ss_dssp EEEEEEGGGCCEEEEEEEECTTTCCEEEEEEEEC
T ss_pred eeEEEEhhHeeEEEEEEecccCCCcceEEEEEEC
Confidence 578999999999999974321211 235566653
No 16
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=34.81 E-value=71 Score=21.21 Aligned_cols=46 Identities=13% Similarity=0.080 Sum_probs=32.5
Q ss_pred CCchhhhHhhhcCCceEEEeeCCEecccCcceEEEEEcCCCCCceEEEEEEe
Q psy13017 1 MELPAHVKACFLGSSLTIPISDGKLNLGMWQGIWLCEHRDQAGSRKLVVTLN 52 (74)
Q Consensus 1 ~d~~AHlkssL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd~gpr~R~v~v~v~ 52 (74)
||.-+..-+.+.|..++ .| -++--|.+..+|-+++++| |++++++.
T Consensus 2 ~~~v~a~~~~l~G~~v~-~v--~~~g~G~~~~vyrv~l~DG---~~~~vK~~ 47 (288)
T 3f7w_A 2 VNSVAARVTELTGREVA-AV--AERGHSHRWHLYRVELADG---TPLFVKAL 47 (288)
T ss_dssp CHHHHHHHHHHHCCCEE-EE--EEEEEETTEEEEEEEETTS---CEEEEEEC
T ss_pred hHHHHHHHHHhcCCCeE-EE--EecCCCCCeEEEEEEECCC---CEEEEEEe
Confidence 45556666778897653 22 3456678889999998754 57999985
No 17
>3pfz_A Cellobiohydrolase 1 catalytic domain; cellulose; HET: PCA NAG BMA MAN CTT CBI; 1.10A {Talaromyces emersonii} SCOP: b.29.1.10 PDB: 1q9h_A* 3pfj_A* 3pfx_A* 3pl3_A*
Probab=32.43 E-value=26 Score=27.49 Aligned_cols=30 Identities=10% Similarity=0.263 Sum_probs=27.6
Q ss_pred hhcCCceEEEeeCCEecccCcceEEEEEcC
Q psy13017 10 CFLGSSLTIPISDGKLNLGMWQGIWLCEHR 39 (74)
Q Consensus 10 sL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd 39 (74)
-|+|+..++-|.=-+|-.|--..+||+|.+
T Consensus 118 ~Ll~~EftFDVDvS~lpCGlNgALYf~~M~ 147 (437)
T 3pfz_A 118 KLLNREFSFDVDVSNLPCGLNGALYFVAMD 147 (437)
T ss_dssp CCTTEEEEEEEECTTCCTTEEEEEEEECCC
T ss_pred EecCCeeEEEeeccCCCccccceeeEEeec
Confidence 378999999999999999999999999987
No 18
>1ojj_A Endoglucanase I; hydrolase, cellulose degradation, glycosynthase; HET: BGC GAL GLC NAG; 1.4A {Humicola insolens} SCOP: b.29.1.10 PDB: 1oji_A* 1ojk_A* 1dym_A* 1a39_A* 2a39_A*
Probab=27.91 E-value=40 Score=26.22 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=27.9
Q ss_pred hhcCCceEEEeeCCEecccCcceEEEEEcC
Q psy13017 10 CFLGSSLTIPISDGKLNLGMWQGIWLCEHR 39 (74)
Q Consensus 10 sL~G~SltiPV~dG~L~LGtWQ~Iyl~Efd 39 (74)
-|+|+..++-|.=-+|-.|--..+||+|.+
T Consensus 123 ~L~~~EftFdVD~S~lpCGlNgALYf~eM~ 152 (402)
T 1ojj_A 123 HLTGFEFTFDVDATKLPCGMNSALYLSEMH 152 (402)
T ss_dssp CCTTSEEEEEEECTTCCTTCEEEEEEECCC
T ss_pred EecCceeEEEeeccCCCcccccceeeeeec
Confidence 378999999999999999999999999987
No 19
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=26.98 E-value=32 Score=24.79 Aligned_cols=15 Identities=0% Similarity=0.164 Sum_probs=12.0
Q ss_pred cCcceEEEEEcCCCC
Q psy13017 28 GMWQGIWLCEHRDQA 42 (74)
Q Consensus 28 GtWQ~Iyl~Efd~gp 42 (74)
+.|+++||+|++...
T Consensus 239 ~~~~Y~FfvD~eg~~ 253 (283)
T 2qmx_A 239 KAFEYLFYADFIGHR 253 (283)
T ss_dssp STTEEEEEEEEESCT
T ss_pred CCcceEEEEEEecCC
Confidence 469999999997443
No 20
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=24.57 E-value=37 Score=25.05 Aligned_cols=27 Identities=4% Similarity=-0.226 Sum_probs=19.9
Q ss_pred cCcceEEEEEcCCCCCc------------eEEEEEEecc
Q psy13017 28 GMWQGIWLCEHRDQAGS------------RKLVVTLNGV 54 (74)
Q Consensus 28 GtWQ~Iyl~Efd~gpr~------------R~v~v~v~Ge 54 (74)
+.|+++||+||++...+ +...++++|.
T Consensus 247 ~~~~Y~FfiD~eg~~~d~~v~~AL~~L~~~~~~~kiLGs 285 (329)
T 3luy_A 247 RTGTYSFIVTLDAAPWEERFRDALVEIAEHGDWAKTLAV 285 (329)
T ss_dssp EEEEEEEEEEESSCTTSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCccEEEEEEEeCCcCCHHHHHHHHHHHHhCCeEEEEee
Confidence 46999999999854332 2357888888
No 21
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=29.74 E-value=16 Score=24.00 Aligned_cols=50 Identities=20% Similarity=0.312 Sum_probs=31.8
Q ss_pred hhhHhhh-cCCceEEEeeCCEecccCcc-----eEEEEEcCCCCCc--eEEEEEEecc
Q psy13017 5 AHVKACF-LGSSLTIPISDGKLNLGMWQ-----GIWLCEHRDQAGS--RKLVVTLNGV 54 (74)
Q Consensus 5 AHlkssL-~G~SltiPV~dG~L~LGtWQ-----~Iyl~Efd~gpr~--R~v~v~v~Ge 54 (74)
.|||..| +|+.+.+-..|++..=|+-| ++|-+.||+|... |+-.+.+-|+
T Consensus 51 ~~ikG~l~vG~~ve~~~~~~~~~~~~I~~i~D~S~YtVVFdDGD~ktLrRt~lclKg~ 108 (118)
T 2lcd_A 51 DQVKGPLRVGAIVETRTSDGSFQEAIISKLTDASWYTVVFDDGDERTLRRTSLCLKGE 108 (118)
Confidence 4566544 67776666666655544443 6688999976532 6667777776
No 22
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=23.40 E-value=41 Score=24.65 Aligned_cols=27 Identities=7% Similarity=0.005 Sum_probs=18.6
Q ss_pred cCcceEEEEEcCCCCCce------------EEEEEEecc
Q psy13017 28 GMWQGIWLCEHRDQAGSR------------KLVVTLNGV 54 (74)
Q Consensus 28 GtWQ~Iyl~Efd~gpr~R------------~v~v~v~Ge 54 (74)
+.|+++||+|++....+. ...++++|.
T Consensus 241 ~~~~Y~FfiD~eg~~~d~~v~~aL~~L~~~~~~~kiLGs 279 (313)
T 3mwb_A 241 YLGHYFFSIDADGHATDSRVADALAGLHRISPATRFLGS 279 (313)
T ss_dssp STTSEEEEEEEESCTTSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCccEEEEEEEeCCCCcHHHHHHHHHHHHhcCcEEEEee
Confidence 479999999997433322 234778877
No 23
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=21.52 E-value=67 Score=18.60 Aligned_cols=28 Identities=29% Similarity=0.465 Sum_probs=19.4
Q ss_pred CCceEEEeeCCEecccCcce------EEEEEcCC
Q psy13017 13 GSSLTIPISDGKLNLGMWQG------IWLCEHRD 40 (74)
Q Consensus 13 G~SltiPV~dG~L~LGtWQ~------Iyl~Efd~ 40 (74)
|..+-+=-+||+..|||-.. -||+.|.|
T Consensus 7 GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D 40 (58)
T 4hcz_A 7 GQDVLARWTDGLLYLGTIKKVDSAREVCLVQFED 40 (58)
T ss_dssp TCEEEEECTTSCEEEEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcC
Confidence 45555667899999998665 45555554
No 24
>3hi2_B Motility quorum-sensing regulator MQSR; toxin-antitoxin system, Zn-binding protein, MQSA, YGIU B3022, B3021, stress response; 2.00A {Escherichia coli k-12}
Probab=21.30 E-value=38 Score=21.48 Aligned_cols=22 Identities=9% Similarity=0.303 Sum_probs=15.8
Q ss_pred cCcceEEEEEcCCCCCceEEEEEEec
Q psy13017 28 GMWQGIWLCEHRDQAGSRKLVVTLNG 53 (74)
Q Consensus 28 GtWQ~Iyl~Efd~gpr~R~v~v~v~G 53 (74)
+.||.||-+.+++ ..+.|++..
T Consensus 68 ~~WQDVY~~~~~~----g~lYiK~t~ 89 (101)
T 3hi2_B 68 TIWQDVYRPRLVT----GQVYLKITV 89 (101)
T ss_dssp TCCEEEECCEETT----EECCEEEEE
T ss_pred CcceeeeecccCC----ceEEEEEEE
Confidence 6799999887753 347777654
No 25
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=21.29 E-value=70 Score=18.89 Aligned_cols=24 Identities=13% Similarity=0.296 Sum_probs=14.1
Q ss_pred ceEEEEEcCCCCC--ceEEEEEEecc
Q psy13017 31 QGIWLCEHRDQAG--SRKLVVTLNGV 54 (74)
Q Consensus 31 Q~Iyl~Efd~gpr--~R~v~v~v~Ge 54 (74)
-++|+|....... ..++.|+|...
T Consensus 87 sg~Y~C~~~~~~~~~~~~v~L~V~~~ 112 (124)
T 2nms_A 87 ADTYWCGIEKTGNDLGVTVQVTIDPA 112 (124)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CEEEEEEEEcCCCCccEEEEEEEeCC
Confidence 5789988653332 33466666554
No 26
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=20.76 E-value=59 Score=23.23 Aligned_cols=15 Identities=7% Similarity=-0.115 Sum_probs=12.1
Q ss_pred cCcceEEEEEcCCCCC
Q psy13017 28 GMWQGIWLCEHRDQAG 43 (74)
Q Consensus 28 GtWQ~Iyl~Efd~gpr 43 (74)
+.|+++||+|++ ...
T Consensus 228 ~~~~Y~FfiD~e-~~~ 242 (267)
T 2qmw_A 228 QLGMYRFFVQAD-SAI 242 (267)
T ss_dssp STTCEEEEEEES-CCS
T ss_pred CCccEEEEEEEe-cCC
Confidence 469999999997 543
Done!