Your job contains 1 sequence.
>psy13018
MNDLEEDVLYRQNVNIYKAGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTIDDVDMEE
EITSDQGD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13018
(68 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
WB|WBGene00012030 - symbol:T25G3.3 species:6239 "Caenorha... 138 1.7e-08 1
CGD|CAL0001704 - symbol:NMD3 species:5476 "Candida albica... 135 3.7e-08 1
ZFIN|ZDB-GENE-050320-149 - symbol:nmd3 "NMD3 homolog (S. ... 129 1.6e-07 1
UNIPROTKB|I3LDB7 - symbol:NMD3 "Uncharacterized protein" ... 126 3.3e-07 1
SGD|S000001213 - symbol:NMD3 "Protein involved in nuclear... 124 5.6e-07 1
UNIPROTKB|C9JA08 - symbol:NMD3 "60S ribosomal export prot... 115 5.4e-06 1
UNIPROTKB|Q96D46 - symbol:NMD3 "60S ribosomal export prot... 114 6.4e-06 1
RGD|1308468 - symbol:Nmd3 "NMD3 homolog (S. cerevisiae)" ... 114 6.4e-06 1
UNIPROTKB|E1BTL9 - symbol:NMD3 "Uncharacterized protein" ... 114 6.4e-06 1
UNIPROTKB|Q08DS5 - symbol:NMD3 "60S ribosomal export prot... 111 1.3e-05 1
POMBASE|SPAC16C9.03 - symbol:nmd3 "export adaptor Nmd3 (p... 110 1.7e-05 1
MGI|MGI:2140103 - symbol:Nmd3 "NMD3 homolog (S. cerevisia... 109 2.2e-05 1
FB|FBgn0023542 - symbol:Nmd3 "Nonsense-mediated mRNA 3" s... 100 0.00022 1
>WB|WBGene00012030 [details] [associations]
symbol:T25G3.3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0071688 "striated muscle myosin
thick filament assembly" evidence=IMP] Pfam:PF04981 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 EMBL:Z72516 eggNOG:COG1499
GeneTree:ENSGT00390000005104 HOGENOM:HOG000168152 KO:K07562
InterPro:IPR007064 PIR:T25285 RefSeq:NP_492114.2
ProteinModelPortal:Q22792 STRING:Q22792 PaxDb:Q22792
EnsemblMetazoa:T25G3.3.1 EnsemblMetazoa:T25G3.3.2 GeneID:3565801
KEGG:cel:CELE_T25G3.3 UCSC:T25G3.3.1 CTD:3565801 WormBase:T25G3.3
InParanoid:Q22792 OMA:LTIQKEX NextBio:957909 Uniprot:Q22792
Length = 513
Score = 138 (53.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPEIP-VDANDINTEDEDPDAPRITLEEMLDDLTIDDVDME 59
M D+EED L R+ +NIYK + P VD +D ED PDAP TL EMLDDL DD +M+
Sbjct: 446 MEDIEEDALMREKINIYKDAEKGPNVDGDD--AEDH-PDAP--TLAEMLDDLKFDDEEMK 500
Query: 60 EEITSDQGD 68
E +++ +
Sbjct: 501 EAESAEDDE 509
>CGD|CAL0001704 [details] [associations]
symbol:NMD3 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
[GO:0043023 "ribosomal large subunit binding" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] CGD:CAL0001704 Pfam:PF04981 EMBL:AACQ01000183
EMBL:AACQ01000182 eggNOG:COG1499 HOGENOM:HOG000168152 KO:K07562
InterPro:IPR007064 RefSeq:XP_711779.1 RefSeq:XP_711797.1
STRING:Q59PZ4 GeneID:3646613 GeneID:3646614 KEGG:cal:CaO19.706
KEGG:cal:CaO19.8325 Uniprot:Q59PZ4
Length = 520
Score = 135 (52.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 30/66 (45%), Positives = 44/66 (66%)
Query: 1 MNDLEEDVLYRQNVNIYKAG---PEIPVDANDINTEDEDPD--APRITLEEMLD---DLT 52
+ +LEED RQ +N+YKAG P++ + +D+N EDED D AP I ++E+LD D+T
Sbjct: 454 LQELEEDDELRQTINLYKAGENQPQVSRNHDDMNDEDEDDDEDAPEIGIDELLDELDDMT 513
Query: 53 IDDVDM 58
+DD M
Sbjct: 514 LDDTPM 519
>ZFIN|ZDB-GENE-050320-149 [details] [associations]
symbol:nmd3 "NMD3 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] Pfam:PF04981 ZFIN:ZDB-GENE-050320-149 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0015031 CTD:51068 eggNOG:COG1499
GeneTree:ENSGT00390000005104 HOGENOM:HOG000168152
HOVERGEN:HBG055100 KO:K07562 OMA:PVCKDNV OrthoDB:EOG43BMNM
InterPro:IPR007064 EMBL:BC090467 IPI:IPI00507258
RefSeq:NP_001013587.1 UniGene:Dr.79205 STRING:Q5BLF0
Ensembl:ENSDART00000021299 GeneID:541444 KEGG:dre:541444
InParanoid:Q5BLF0 NextBio:20879251 Bgee:Q5BLF0 Uniprot:Q5BLF0
Length = 505
Score = 129 (50.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTIDD 55
+ DLEED + R+N+NI++ +IPV+ +D T+D+ APRI+L EML+DL++ D
Sbjct: 443 LEDLEEDEMLRKNINIFRDASKIPVEESD--TDDDG--APRISLAEMLEDLSLSD 493
>UNIPROTKB|I3LDB7 [details] [associations]
symbol:NMD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] Pfam:PF04981
GO:GO:0005730 GeneTree:ENSGT00390000005104 OMA:PVCKDNV
InterPro:IPR007064 EMBL:CU928899 Ensembl:ENSSSCT00000024911
Uniprot:I3LDB7
Length = 507
Score = 126 (49.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 33/67 (49%), Positives = 42/67 (62%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTIDDVDMEE 60
+ DLEED R+NVNIY+ P IPV+++ T+DE APRI+L EML+DL I E
Sbjct: 443 LEDLEEDEAIRKNVNIYR-DPTIPVESD---TDDEG--APRISLAEMLEDLHISQDATGE 496
Query: 61 EITSDQG 67
E S G
Sbjct: 497 EARSAPG 503
>SGD|S000001213 [details] [associations]
symbol:NMD3 "Protein involved in nuclear export of the large
ribosomal subunit" species:4932 "Saccharomyces cerevisiae"
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0043023 "ribosomal large subunit binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000055
"ribosomal large subunit export from nucleus" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
SGD:S000001213 Pfam:PF04981 GO:GO:0005829 GO:GO:0005654
GO:GO:0015031 EMBL:BK006934 EMBL:U00027 GO:GO:0000055 GO:GO:0043023
eggNOG:COG1499 GeneTree:ENSGT00390000005104 HOGENOM:HOG000168152
KO:K07562 OMA:PVCKDNV InterPro:IPR007064 OrthoDB:EOG40311R
EMBL:U31376 PIR:S48909 RefSeq:NP_012040.1 ProteinModelPortal:P38861
DIP:DIP-1827N IntAct:P38861 MINT:MINT-389613 STRING:P38861
PaxDb:P38861 PeptideAtlas:P38861 EnsemblFungi:YHR170W GeneID:856575
KEGG:sce:YHR170W NextBio:982429 Genevestigator:P38861
GermOnline:YHR170W Uniprot:P38861
Length = 518
Score = 124 (48.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 25/63 (39%), Positives = 45/63 (71%)
Query: 1 MNDLEEDVLYRQNVNIYK-AGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTIDDVDME 59
+ +LEED RQ+VN+YK +P + ++++ EDED DAP+I ++E+LD+L D++ +E
Sbjct: 450 LQELEEDAELRQSVNLYKNREANVPPEEHEMD-EDEDEDAPQINIDELLDEL--DEMTLE 506
Query: 60 EEI 62
+ +
Sbjct: 507 DGV 509
>UNIPROTKB|C9JA08 [details] [associations]
symbol:NMD3 "60S ribosomal export protein NMD3"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Pfam:PF04981 GO:GO:0005730
HOGENOM:HOG000168152 OMA:PVCKDNV InterPro:IPR007064 HGNC:HGNC:24250
EMBL:AC021649 EMBL:AC108738 IPI:IPI00797406
ProteinModelPortal:C9JA08 STRING:C9JA08 PRIDE:C9JA08
Ensembl:ENST00000472947 UCSC:uc003fec.3 ArrayExpress:C9JA08
Bgee:C9JA08 Uniprot:C9JA08
Length = 529
Score = 115 (45.5 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTIDDVDMEE 60
+ DLEED R+NVNIY+ IPV+++ T+DE APRI+L EML+DL I E
Sbjct: 443 LEDLEEDEAIRKNVNIYRDSA-IPVESD---TDDEG--APRISLAEMLEDLHISQDATGE 496
Query: 61 EITS 64
E S
Sbjct: 497 EAKS 500
>UNIPROTKB|Q96D46 [details] [associations]
symbol:NMD3 "60S ribosomal export protein NMD3"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Pfam:PF04981 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0015031 EMBL:CH471052 CTD:51068
eggNOG:COG1499 HOGENOM:HOG000168152 HOVERGEN:HBG055100 KO:K07562
InterPro:IPR007064 EMBL:AF132941 EMBL:BC013317 IPI:IPI00790937
RefSeq:NP_057022.2 UniGene:Hs.598836 ProteinModelPortal:Q96D46
DIP:DIP-53427N IntAct:Q96D46 STRING:Q96D46 PhosphoSite:Q96D46
DMDM:74731412 PaxDb:Q96D46 PRIDE:Q96D46 DNASU:51068
Ensembl:ENST00000351193 Ensembl:ENST00000460469 GeneID:51068
KEGG:hsa:51068 UCSC:uc003feb.1 GeneCards:GC03P160822
H-InvDB:HIX0003824 HGNC:HGNC:24250 HPA:HPA035019 MIM:611021
neXtProt:NX_Q96D46 PharmGKB:PA134884140 InParanoid:Q96D46
PhylomeDB:Q96D46 GenomeRNAi:51068 NextBio:53671 ArrayExpress:Q96D46
Bgee:Q96D46 CleanEx:HS_NMD3 Genevestigator:Q96D46 Uniprot:Q96D46
Length = 503
Score = 114 (45.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTID-DVDME 59
+ DLEED R+NVNIY+ IPV+++ T+DE APRI+L EML+DL I D E
Sbjct: 443 LEDLEEDEAIRKNVNIYRDSA-IPVESD---TDDEG--APRISLAEMLEDLHISQDATGE 496
Query: 60 E 60
E
Sbjct: 497 E 497
>RGD|1308468 [details] [associations]
symbol:Nmd3 "NMD3 homolog (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] RGD:1308468 Pfam:PF04981 GO:GO:0005730
EMBL:CH473976 CTD:51068 eggNOG:COG1499 GeneTree:ENSGT00390000005104
HOGENOM:HOG000168152 HOVERGEN:HBG055100 KO:K07562 OrthoDB:EOG43BMNM
InterPro:IPR007064 EMBL:BC161998 IPI:IPI00762953
RefSeq:NP_001101152.1 UniGene:Rn.61090 STRING:B1WC44
Ensembl:ENSRNOT00000012417 Ensembl:ENSRNOT00000064244 GeneID:310512
KEGG:rno:310512 UCSC:RGD:1308468 NextBio:662089
Genevestigator:B1WC44 Uniprot:B1WC44
Length = 503
Score = 114 (45.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTID-DVDME 59
+ DLEED R+NVNIY+ +PV+++ T+DE APRI+L EML+DL I D E
Sbjct: 443 LEDLEEDETIRKNVNIYRDST-VPVESD---TDDEG--APRISLAEMLEDLRISQDATGE 496
Query: 60 E 60
E
Sbjct: 497 E 497
>UNIPROTKB|E1BTL9 [details] [associations]
symbol:NMD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] Pfam:PF04981
GO:GO:0005730 CTD:51068 GeneTree:ENSGT00390000005104 KO:K07562
OMA:PVCKDNV InterPro:IPR007064 EMBL:AADN02021063 EMBL:AADN02021062
IPI:IPI00591200 RefSeq:XP_422813.2 Ensembl:ENSGALT00000015516
GeneID:425009 KEGG:gga:425009 NextBio:20827260 Uniprot:E1BTL9
Length = 504
Score = 114 (45.2 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTIDD 55
+ DLEED R+NVNIY+ +IPV+++ T+D+ APRI+L EML+DL I +
Sbjct: 443 LEDLEEDEAIRKNVNIYR-NADIPVESD---TDDDG--APRISLAEMLEDLHISE 491
>UNIPROTKB|Q08DS5 [details] [associations]
symbol:NMD3 "60S ribosomal export protein NMD3"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
Pfam:PF04981 GO:GO:0005737 GO:GO:0005654 GO:GO:0005730
GO:GO:0015031 EMBL:BC123588 IPI:IPI00711949 RefSeq:NP_001068888.1
UniGene:Bt.27265 STRING:Q08DS5 PRIDE:Q08DS5
Ensembl:ENSBTAT00000021594 GeneID:509871 KEGG:bta:509871 CTD:51068
eggNOG:COG1499 GeneTree:ENSGT00390000005104 HOGENOM:HOG000168152
HOVERGEN:HBG055100 InParanoid:Q08DS5 KO:K07562 OMA:PVCKDNV
OrthoDB:EOG43BMNM NextBio:20869176 ArrayExpress:Q08DS5
InterPro:IPR007064 Uniprot:Q08DS5
Length = 503
Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTI 53
+ DLEED R+NVNIY+ IPV+++ T+DE APRI+L EML+DL I
Sbjct: 443 LEDLEEDEAIRKNVNIYRDST-IPVESD---TDDEG--APRISLAEMLEDLHI 489
>POMBASE|SPAC16C9.03 [details] [associations]
symbol:nmd3 "export adaptor Nmd3 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000027 "ribosomal
large subunit assembly" evidence=ISO] [GO:0000054 "ribosomal
subunit export from nucleus" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0015031 "protein transport"
evidence=IEA] PomBase:SPAC16C9.03 Pfam:PF04981 GO:GO:0005829
GO:GO:0005634 GO:GO:0005654 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0015031 GO:GO:0000027 GO:GO:0000054 eggNOG:COG1499
HOGENOM:HOG000168152 KO:K07562 OMA:PVCKDNV InterPro:IPR007064
PIR:S62473 RefSeq:NP_593077.1 STRING:Q09817
EnsemblFungi:SPAC16C9.03.1 GeneID:2542319 KEGG:spo:SPAC16C9.03
OrthoDB:EOG40311R NextBio:20803380 Uniprot:Q09817
Length = 498
Score = 110 (43.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPE-IPVDANDINTEDE-DPDAPRITLEEMLDDL 51
+ +LEED RQ VN+YKA + I V D++ EDE D D P+I+++E+LDD+
Sbjct: 441 LQNLEEDPELRQGVNLYKAPVKAIAVADTDMDEEDEVDEDIPQISVDELLDDV 493
>MGI|MGI:2140103 [details] [associations]
symbol:Nmd3 "NMD3 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000055 "ribosomal large subunit export from
nucleus" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0043023 "ribosomal large subunit binding" evidence=ISO]
MGI:MGI:2140103 Pfam:PF04981 GO:GO:0005737 GO:GO:0005654
GO:GO:0005730 GO:GO:0015031 CTD:51068 eggNOG:COG1499
GeneTree:ENSGT00390000005104 HOGENOM:HOG000168152
HOVERGEN:HBG055100 KO:K07562 OMA:PVCKDNV OrthoDB:EOG43BMNM
InterPro:IPR007064 EMBL:AK034772 EMBL:AK088667 EMBL:AK143289
EMBL:AK145248 EMBL:AK166283 EMBL:BC003842 IPI:IPI00116309
IPI:IPI00881976 RefSeq:NP_598548.1 UniGene:Mm.21062
UniGene:Mm.439485 ProteinModelPortal:Q99L48 STRING:Q99L48
PhosphoSite:Q99L48 PaxDb:Q99L48 PRIDE:Q99L48
Ensembl:ENSMUST00000029358 GeneID:97112 KEGG:mmu:97112
UCSC:uc008pmk.1 UCSC:uc008pml.1 InParanoid:Q99L48 NextBio:352527
Bgee:Q99L48 CleanEx:MM_NMD3 Genevestigator:Q99L48 Uniprot:Q99L48
Length = 503
Score = 109 (43.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 1 MNDLEEDVLYRQNVNIYKAGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTID-DVDME 59
+ DLEED R++VNIY+ IPV+++ T+DE APRI+L EML+DL I D E
Sbjct: 443 LEDLEEDEAIRKHVNIYRDAT-IPVESD---TDDEG--APRISLAEMLEDLHISQDATGE 496
Query: 60 E 60
E
Sbjct: 497 E 497
>FB|FBgn0023542 [details] [associations]
symbol:Nmd3 "Nonsense-mediated mRNA 3" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP] Pfam:PF04981
GO:GO:0022008 EMBL:AE014298 EMBL:AL009194 CTD:51068 eggNOG:COG1499
GeneTree:ENSGT00390000005104 KO:K07562 OMA:PVCKDNV
InterPro:IPR007064 EMBL:AY058494 RefSeq:NP_477332.1 UniGene:Dm.7201
IntAct:O46050 MINT:MINT-746738 STRING:O46050
EnsemblMetazoa:FBtr0070425 GeneID:31195 KEGG:dme:Dmel_CG3460
UCSC:CG3460-RA FlyBase:FBgn0023542 InParanoid:O46050
OrthoDB:EOG473N6G ChiTaRS:NMD3 GenomeRNAi:31195 NextBio:772403
Uniprot:O46050
Length = 521
Score = 100 (40.3 bits), Expect = 0.00022, P = 0.00022
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 1 MNDLEEDVLYRQNVNIYK-AGPEIPVDANDINTEDEDPDAPRITLEEMLDDLTID--DVD 57
++DLEE+ R VNIY+ IP++ + D P+ITLEEML+D+T++ D +
Sbjct: 453 LDDLEENEDIRGQVNIYRDTNKTIPIEV-----QAAGGDVPQITLEEMLEDMTLECADDE 507
Query: 58 MEEEITSD 65
M EE +D
Sbjct: 508 MGEEGGAD 515
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.307 0.134 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 68 68 0.00091 102 3 11 23 0.44 29
29 0.38 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 364 (39 KB)
Total size of DFA: 71 KB (2064 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.75u 0.06s 10.81t Elapsed: 00:00:02
Total cpu time: 10.76u 0.06s 10.82t Elapsed: 00:00:02
Start: Thu Aug 15 12:45:41 2013 End: Thu Aug 15 12:45:43 2013