BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13020
(81 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q64446|ATP7B_MOUSE Copper-transporting ATPase 2 OS=Mus musculus GN=Atp7b PE=1 SV=2
Length = 1462
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFD--------ARLPSTNDEAT-----FTV 52
+VSLEQ +A +R+ P + N + + + IEDMGF+ A PS + A V
Sbjct: 100 KVSLEQGSATVRYVPSVMNLQQICLQIEDMGFEASAAEGKAASWPSRSSPAQEAVVKLRV 159
Query: 53 DGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+GM CQSCV IE I + GV+ +KVS
Sbjct: 160 EGMTCQSCVSSIEGKIRKLQGVVRIKVS 187
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 42/119 (35%)
Query: 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA-----------------RLPSTND 46
R +VSL + A I + P + E LR I DMGF+A +L STN
Sbjct: 183 RIKVSLSNQEAVITYQPYLIQPEDLRDHICDMGFEAAIKNRTAPLRLGPIDVNKLESTNL 242
Query: 47 E-----------------------ATFT--VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ AT +DGM C+SCV IE IG+ PGV + VS
Sbjct: 243 KKETVSPVQISNHFETLGHQGSYLATLPLRIDGMHCKSCVLNIEGNIGQLPGVQNIHVS 301
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTN----DEATFTVDGMKCQSCVK 62
V+L A ++++P I + I+D+GF+A + N + + GM C SCV
Sbjct: 523 VALMSGKAEVKYDPEIIQSPRIAQLIQDLGFEASVMEDNTVSEGDIELIITGMTCASCVH 582
Query: 63 KIEATIGEKPGVIAVKVS 80
IE+ + G+ V+
Sbjct: 583 NIESKLTRTNGITYASVA 600
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 31 SIEDMGFDARLPSTNDEATFT----VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ +++G++ L ST+ T + GM C SCVK IE I G++ +KVS
Sbjct: 49 AFDNVGYEGGLDSTSSSPAATDVVNILGMTCHSCVKSIEDRISSLKGIVNIKVS 102
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVK 62
++ +SL + + ++P I + + LR ++EDMGF+ S N E TFT++ ++
Sbjct: 390 QQTSISLAEGTGAVLYDPSIVSLDELRTAVEDMGFEV---SVNSE-TFTINPVRNFKSGN 445
Query: 63 KIEATIGEKPGVI 75
+ T+G+ G +
Sbjct: 446 SVPQTMGDIAGSV 458
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 22/97 (22%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMG---FDARLPSTNDE--------------- 47
VSLE K A I+++P L+ +IE + F LP +E
Sbjct: 299 HVSLENKTAQIQYDPSCVTPMFLQTAIEALPPGHFKVSLPDGVEENEPQSGSSQRHQEQG 358
Query: 48 ----ATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
A T+ G+ C S V+ IE + ++ GV +S
Sbjct: 359 PGRTAVLTISGITCASSVQPIEDMLSQRKGVQQTSIS 395
>sp|Q64535|ATP7B_RAT Copper-transporting ATPase 2 OS=Rattus norvegicus GN=Atp7b PE=2
SV=1
Length = 1451
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR--------LPSTNDEAT-----FTV 52
+VSLEQ +A +++ P + N + + + IEDMGF+A PS + A V
Sbjct: 89 KVSLEQGSATVKYVPSVLNLQQICLQIEDMGFEASAAEGKAASWPSRSSPAQEAVVKLRV 148
Query: 53 DGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+GM CQSCV IE I + GV+ VKVS
Sbjct: 149 EGMTCQSCVSSIEGKIRKLQGVVRVKVS 176
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 49/119 (41%), Gaps = 42/119 (35%)
Query: 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA-----------------RLPSTND 46
R +VSL + A I + P + E LR I DMGF+A +L STN
Sbjct: 172 RVKVSLSNQEAVITYQPYLIQPEDLRDHICDMGFEAAIKNRTAPLRLGPIDINKLESTNL 231
Query: 47 E-----------------------ATFT--VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ AT +DGM C+SCV IE IG+ PGV + VS
Sbjct: 232 KRAAVPPIQNSNHLETPGHQQNHLATLPLRIDGMHCKSCVLNIEGNIGQLPGVQNIHVS 290
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTN----DEATFTVDGMKCQSCVK 62
V+L A ++++P + + IED+GF+A + N + + GM C SCV
Sbjct: 514 VALMSGKAEVKYDPEVIQSPRIAQLIEDLGFEAAIMEDNTVSEGDIELIITGMTCASCVH 573
Query: 63 KIEATIGEKPGVIAVKVS 80
IE+ + G+ V+
Sbjct: 574 NIESKLTRTNGITYASVA 591
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 31 SIEDMGFDARLPSTN-----DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ +++G++ L ST ++ GM C SCVK IE I G++++KVS
Sbjct: 37 AFDNVGYEGGLDSTCFILQLTTGVVSILGMTCHSCVKSIEDRISSLKGIVSIKVS 91
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIEA 66
+SL + + ++P + + + LR ++EDMGF+ + N G +
Sbjct: 388 ISLAEGTGAVLYDPSVVSSDELRTAVEDMGFEVSVNPENITTNRVSSG-------NSVPQ 440
Query: 67 TIGEKPGVI 75
+G+ PG +
Sbjct: 441 AVGDSPGSV 449
>sp|Q9XT50|ATP7B_SHEEP Copper-transporting ATPase 2 OS=Ovis aries GN=ATP7B PE=2 SV=1
Length = 1505
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARL-------------PSTNDEATFTV 52
+VSLEQ +A +R+ P + + + IEDMGF A + P++ V
Sbjct: 145 KVSLEQSSAEVRYVPSVVSLMQICHQIEDMGFQASVAEGKATSWASRVSPTSEAVVKLRV 204
Query: 53 DGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+GM CQSCV IE IG+ GV+ V+VS
Sbjct: 205 EGMTCQSCVSSIEGKIGKLQGVMRVRVS 232
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 50/116 (43%), Gaps = 39/116 (33%)
Query: 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA-----------------RLPST-- 44
R +VSL + A I + P + + LR I DMGF+A RL ST
Sbjct: 228 RVRVSLSNQEAVITYQPYLIQPQDLRDHITDMGFEAVIKNKVAPVSLGPIDVRRLQSTLS 287
Query: 45 ---------NDEATFT-----------VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
ND + T VDGM C+SCV IE IG+ PGV ++ VS
Sbjct: 288 VAPPAPVNQNDNNSETPGGQGVPLHLRVDGMHCKSCVLNIEDNIGQLPGVQSIHVS 343
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 19/93 (20%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDM----------------GFDARLP---STND 46
VSLE + A +++NP + + LR +IE + G D+R P S
Sbjct: 341 HVSLESRTARVQYNPSLVSPGALRRAIEALPPGNFKVSFPNGAEGSGPDSRTPPAPSAPC 400
Query: 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKV 79
+ GM C+SCV+ IE I ++ GV + V
Sbjct: 401 TMMLAIAGMTCKSCVQSIEGLISQRVGVHQISV 433
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 37 FDARLPSTNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
D PS T ++ GM CQSCVK IE + G++++KVS
Sbjct: 104 LDGVCPSQTAAGTISIVGMTCQSCVKSIEGRVSSLKGIVSIKVS 147
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARL----PSTNDEATFTVDGMKCQSCVK 62
V+L A +++NP + ++D+GF+A + ++ + + GM C SCV
Sbjct: 562 VALMAGKAEVKYNPEAIQPLEIAKLVQDLGFEAAVMEDYTGSDGDLELMITGMTCASCVH 621
Query: 63 KIEATIGEKPGVIAVKVS 80
IE+ + G+ V+
Sbjct: 622 NIESKLRRTEGITYASVA 639
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 5 HQVS--LEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTN 45
HQ+S L + A + ++P T+ E LR ++EDMGF+A + + N
Sbjct: 429 HQISVFLAEGTAVVLYDPSRTHPEELRAAVEDMGFEASILAEN 471
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 52 VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ GM C SCV IE + ++PG+++V V+
Sbjct: 535 ISGMTCASCVSNIERNLQKEPGILSVLVA 563
>sp|Q64430|ATP7A_MOUSE Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=3
Length = 1491
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 30/108 (27%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLP-------------------- 42
K VSL I F+P++T+ ETLR +IEDMGFDA LP
Sbjct: 406 KSIHVSLANSTGTIEFDPLLTSPETLREAIEDMGFDAALPDMKEPLVVIAQPSLETPLLP 465
Query: 43 ----------STNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
S ++ V GM C SCV IE + + G+ +V V+
Sbjct: 466 SSNELENVMTSVQNKCYIQVSGMTCASCVANIERNLRREEGIYSVLVA 513
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEAT----FTVDGMKCQSCVK 62
V+L A +R+NP + + I ++GF A + E V GM C SCV
Sbjct: 512 VALMAGKAEVRYNPAVIQPRVIAEFIRELGFGAMVMENAGEGNGILELVVRGMTCASCVH 571
Query: 63 KIEATIGEKPGVIAVKVS 80
KIE+T+ + G+ V+
Sbjct: 572 KIESTLTKHKGIFYCSVA 589
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 28/102 (27%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIE----------------------------DMGFD 38
VSLE ++A +++N + E LR +IE M +
Sbjct: 310 VSLENRSAIVKYNASLVTPEMLRKAIEAISPGQYRVSIASEVESTASSPSSSSLQKMPLN 369
Query: 39 ARLPSTNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
EA ++GM C SCV+ IE I +KPGV ++ VS
Sbjct: 370 IVSQPLTQEAVININGMTCNSCVQSIEGVISKKPGVKSIHVS 411
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTN-----DEATFTVDGMKCQSC 60
+VSLE+K+A I ++P + +TL+ +I+DMGFDA L + N F
Sbjct: 40 KVSLEEKSATIIYDPKLQTPKTLQEAIDDMGFDALLHNANPLPVLTNTVFLTVTAPLTLP 99
Query: 61 VKKIEATIGEKPGVIAVKVS 80
I++T+ + GV VK+S
Sbjct: 100 WDHIQSTLLKTKGVTGVKIS 119
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 34/112 (30%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA-----------------RL---- 41
+R +VSL+ + A I F P + E ++ IE +GF A RL
Sbjct: 200 QRIKVSLDNQEATIVFQPHLITAEEIKKQIEAVGFPAFIKKQPKYLKLGAIDVERLKNTP 259
Query: 42 -----------PSTNDEAT--FTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
PS ++T FT++GM C+SCV IE+ + V ++ VS
Sbjct: 260 VKSSEGSQQKSPSYPSDSTTMFTIEGMHCKSCVSNIESALSTLQYVSSIVVS 311
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 42 PSTN-DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
PS + + T TV+GM C SCV+ IE IG+ GV +KVS
Sbjct: 3 PSVDANSITITVEGMTCISCVRTIEQQIGKVNGVHHIKVS 42
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 52 VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
V+GM C SC IE +G+ GV +KVS
Sbjct: 177 VEGMTCHSCTSTIEGKVGKLQGVQRIKVS 205
>sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1
PE=1 SV=1
Length = 1001
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR-LPSTNDEAT----FTVDGMKCQ 58
+ V+L Q A++ F+P + EE ++ +IED GF+A L +AT FT+ GM C
Sbjct: 86 KASVALLQNRADVVFDPNLVKEEDIKEAIEDAGFEAEILAEEQTQATLVGQFTIGGMTCA 145
Query: 59 SCVKKIEATIGEKPGV 74
+CV +E + + PGV
Sbjct: 146 ACVNSVEGILRDLPGV 161
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTN--DEATFTVDGMKCQSC 60
KR V+L + ++P + N++ + +IED GF+ L +N D+ VDG+ +
Sbjct: 162 KRAVVALSTSLGEVEYDPNVINKDDIVNAIEDAGFEGSLVQSNQQDKLVLRVDGILNELD 221
Query: 61 VKKIEATIGEKPGV 74
+ +E + GV
Sbjct: 222 AQVLEGILTRLNGV 235
>sp|P35670|ATP7B_HUMAN Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4
Length = 1465
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR-------------LPSTNDEATFTV 52
+VSLEQ +A +++ P + + + I DMGF+A LP+ V
Sbjct: 90 KVSLEQGSATVKYVPSVVCLQQVCHQIGDMGFEASIAEGKAASWPSRSLPAQEAVVKLRV 149
Query: 53 DGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+GM CQSCV IE + + GV+ VKVS
Sbjct: 150 EGMTCQSCVSSIEGKVRKLQGVVRVKVS 177
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 42/119 (35%)
Query: 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA-----------------RLPSTND 46
R +VSL + A I + P + E LR + DMGF+A RL STN
Sbjct: 173 RVKVSLSNQEAVITYQPYLIQPEDLRDHVNDMGFEAAIKSKVAPLSLGPIDIERLQSTNP 232
Query: 47 EATFT-------------------------VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ + +DGM C+SCV IE IG+ GV +++VS
Sbjct: 233 KRPLSSANQNFNNSETLGHQGSHVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVS 291
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 57/131 (43%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDA--------------------------- 39
VSL + A + +NP + + E LR +IEDMGF+A
Sbjct: 392 VSLAEGTATVLYNPSVISPEELRAAIEDMGFEASVVSESCSTNPLGNHSAGNSMVQTTDG 451
Query: 40 -------------RLPSTN-----------------DEATFTVDGMKCQSCVKKIEATIG 69
RLP+ + + + GM C SCV IE +
Sbjct: 452 TPTSVQEVAPHTGRLPANHAPDILAKSPQSTRAVAPQKCFLQIKGMTCASCVSNIERNLQ 511
Query: 70 EKPGVIAVKVS 80
++ GV++V V+
Sbjct: 512 KEAGVLSVLVA 522
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARL----PSTNDEATFTVDGMKCQSCVK 62
V+L A I+++P + + I+D+GF+A + ++ T+ GM C SCV
Sbjct: 521 VALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIELTITGMTCASCVH 580
Query: 63 KIEATIGEKPGVIAVKVS 80
IE+ + G+ V+
Sbjct: 581 NIESKLTRTNGITYASVA 598
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 36 GFDARLPSTN-DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
G D PS+ +T + GM CQSCVK IE I G+I++KVS
Sbjct: 47 GLDGLGPSSQVATSTVRILGMTCQSCVKSIEDRISNLKGIISMKVS 92
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 30/105 (28%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDM---GFDARLP-------------------- 42
QVSLE K A ++++P T+ L+ +IE + F LP
Sbjct: 289 QVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGS 348
Query: 43 -------STNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
T + GM C SCV IE I + GV + VS
Sbjct: 349 PPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVS 393
>sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3
Length = 1500
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 39/117 (33%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTND---------------- 46
K +VSL N + ++P++T+ ETLR +IEDMGFDA L TN+
Sbjct: 406 KSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLSDTNEPLVVIAQPSSEMPLLT 465
Query: 47 -----------------------EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ V GM C SCV IE + + G+ ++ V+
Sbjct: 466 STNEFYTKGMTPVQDKEEGKNSSKCYIQVTGMTCASCVANIERNLRREEGIYSILVA 522
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 34/112 (30%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA----------------------- 39
+R +VSL+ + A I + P + + E ++ IE MGF A
Sbjct: 200 QRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQPKYLKLGAIDVERLKNTP 259
Query: 40 ---------RLPS-TNDE-ATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
R PS TND ATF +DGM C+SCV IE+T+ V ++ VS
Sbjct: 260 VKSSEGSQQRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVS 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEAT----FTVDGMKCQSCVK 62
V+L A +R+NP + + I ++GF A + DE V GM C SCV
Sbjct: 521 VALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIENADEGDGVLELVVRGMTCASCVH 580
Query: 63 KIEATIGEKPGVIAVKVS 80
KIE+++ + G++ V+
Sbjct: 581 KIESSLTKHRGILYCSVA 598
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 28/102 (27%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMG---FDARLPS-------------------- 43
VSLE ++A +++N E+LR +IE + + + S
Sbjct: 310 VSLENRSAIVKYNASSVTPESLRKAIEAVSPGLYRVSITSEVESTSNSPSSSSLQKIPLN 369
Query: 44 -----TNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
E +DGM C SCV+ IE I +KPGV +++VS
Sbjct: 370 VVSQPLTQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVS 411
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDA------RLPSTNDEATFTVDGMKCQS 59
+VSLE+KNA I ++P + +TL+ +I+DMGFDA LP D TV
Sbjct: 40 KVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNPDPLPVLTDTLFLTVTASLTLP 99
Query: 60 CVKKIEATIGEKPGVIAVKV 79
I++T+ + GV +K+
Sbjct: 100 W-DHIQSTLLKTKGVTDIKI 118
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ T +V+GM C SCV IE IG+ GV +KVS
Sbjct: 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVS 42
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 52 VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
V+GM C SC IE IG+ GV +KVS
Sbjct: 177 VEGMTCHSCTSTIEGKIGKLQGVQRIKVS 205
>sp|P49015|ATP7A_CRIGR Copper-transporting ATPase 1 (Fragment) OS=Cricetulus griseus
GN=ATP7A PE=2 SV=1
Length = 1476
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 30/108 (27%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA--------------------RLP 42
K VSL + ++P++T ETLR I DMGFDA LP
Sbjct: 405 KSIHVSLANSFGTVEYDPLLTAPETLREVIVDMGFDAVLPDMSEPLVVIAQPSLETPLLP 464
Query: 43 STNDE----------ATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
STND+ V GM C SCV IE + + G+ +V V+
Sbjct: 465 STNDQDNMMTAVHSKCYIQVSGMTCASCVANIERNLRREEGIYSVLVA 512
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEA----TFTVDGMKCQSCVK 62
V+L A +R+NP + + I ++GF A + DE V GM C SCV
Sbjct: 511 VALMAGKAEVRYNPAVIQPPVIAEFIRELGFGATVMENADEGDGILKLVVRGMTCASCVH 570
Query: 63 KIEATIGEKPGVIAVKVS 80
KIE+T+ + G+ V+
Sbjct: 571 KIESTLTKHKGIFYCSVA 588
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFT 51
+VSLE+K+A I ++P + +TL+ +I+DMGFDA L + N T
Sbjct: 40 KVSLEEKSATIIYDPKLQTPKTLQEAIDDMGFDALLHNANPLPVLT 85
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 33/111 (29%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA-----------------RLPST- 44
+R +VSL+ + A I + P + + E ++ IE MGF A RL +T
Sbjct: 200 QRIKVSLDNQEATIVYQPHLISVEEIKKQIEAMGFPAFVKKQPKYLKLGAIDVERLKNTP 259
Query: 45 ---------------NDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ ATF ++GM C+SCV IE+ + V ++ VS
Sbjct: 260 VKSLEGSQQRPSYPSDSTATFIIEGMHCKSCVSNIESALPTLQYVSSIAVS 310
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
E + GM C SCV+ IE + +KPGV ++ VS
Sbjct: 377 ETVINISGMTCNSCVQSIEGVVSKKPGVKSIHVS 410
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 42 PSTN-DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
PS + + T +V+GM C SCV+ IE IG++ G+ +KVS
Sbjct: 3 PSMDVNSVTISVEGMTCISCVRTIEQKIGKENGIHHIKVS 42
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 52 VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
V+GM C SC E IG+ GV +KVS
Sbjct: 177 VEGMTCHSCTSTTEGKIGKLQGVQRIKVS 205
>sp|P70705|ATP7A_RAT Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1
SV=1
Length = 1492
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 31/109 (28%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPS------------------- 43
K VSL I ++P++T+ E LR +IEDMGFDA LP+
Sbjct: 406 KSIHVSLTNSTGTIEYDPLLTSPEPLREAIEDMGFDAVLPADMKEPLVVIAQPSLETPLL 465
Query: 44 ---TNDEATFT---------VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
T E T V GM C SCV IE + + G+ +V V+
Sbjct: 466 PSTTEPENVMTPVQNKCYIQVSGMTCASCVANIERNLRREEGIYSVLVA 514
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTN-----DEATFTVDGMKCQSC 60
+VSLE+K+A + +NP + +TL+ +I+DMGFDA L + N F
Sbjct: 40 KVSLEEKSATVIYNPKLQTPKTLQEAIDDMGFDALLHNANPLPVLTNTVFLTVTAPLALP 99
Query: 61 VKKIEATIGEKPGVIAVKVS 80
I++T+ + GV VK+S
Sbjct: 100 WDHIQSTLLKTKGVTGVKIS 119
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEAT----FTVDGMKCQSCVK 62
V+L A +R+NP + + I ++GF A + E V GM C SCV
Sbjct: 513 VALMAGKAEVRYNPAVIQPRVIAELIRELGFGAVVMENAGEGNGILELVVRGMTCASCVH 572
Query: 63 KIEATIGEKPGVIAVKVS 80
KIE+T+ + G+ V+
Sbjct: 573 KIESTLTKHKGIFYCSVA 590
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 34/112 (30%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA-----------------RLPST- 44
+R +VSL+ + A I + P + E ++ IE +GF A RL ST
Sbjct: 200 QRIKVSLDNQEATIVYQPHLITAEEIKKQIEAVGFPAFIKKQPKYLKLGAIDVERLKSTP 259
Query: 45 ---------------NDEA-TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+D A TFT+DGM C+SCV IE+ + V ++ VS
Sbjct: 260 VKSSEGSQQKSPAYPSDSAITFTIDGMHCKSCVSNIESALSTLQYVSSIVVS 311
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 28/102 (27%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIE----------------------------DMGFD 38
VSLE ++A +++N + E LR +IE M +
Sbjct: 310 VSLENRSAIVKYNASLVTPEILRKAIEAVSPGQYRVSISSEVESPTSSPSSSSLQKMPLN 369
Query: 39 ARLPSTNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
E ++GM C SCV+ IE I +KPGV ++ VS
Sbjct: 370 LVSQPLTQEVVININGMTCNSCVQSIEGVISKKPGVKSIHVS 411
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
T TV+GM C SCV+ IE IG+ GV +KVS
Sbjct: 11 TITVEGMTCISCVRTIEQQIGKVNGVHHIKVS 42
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 34 DMGFDARLPSTNDEAT----------FTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
DMG + T++E + V+GM C SC IE +G+ GV +KVS
Sbjct: 149 DMGTQEKKSGTSEEHSTPQAGEVLLKMRVEGMTCHSCTSTIEGKVGKLQGVQRIKVS 205
>sp|Q9SH30|HMA5_ARATH Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana
GN=HMA5 PE=2 SV=2
Length = 995
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEAT---FTVDGMKCQS 59
+R V+L + A I ++P +++ + L IE+ GF+A L ST ++ + +DG
Sbjct: 158 QRAHVALAIEEAEIHYDPRLSSYDRLLEEIENAGFEAVLISTGEDVSKIDLKIDGELTDE 217
Query: 60 CVKKIEATIGEKPGVIAVKVSH 81
+K IE ++ PGV +V++SH
Sbjct: 218 SMKVIERSLEALPGVQSVEISH 239
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 14 ANIRFNPIITNEETLRISIEDMGFDARLPSTNDEAT--------FTVDGMKCQSCVKKIE 65
A I F P + ET+R +IED GF+A L +EA ++GM C SC IE
Sbjct: 91 AQILFYPNSVDVETIRETIEDAGFEASL--IENEANERSRQVCRIRINGMTCTSCSSTIE 148
Query: 66 ATIGEKPGV 74
+ GV
Sbjct: 149 RVLQSVNGV 157
>sp|Q9X5X3|ATCU_SINMW Copper-transporting P-type ATPase OS=Sinorhizobium medicae (strain
WSM419) GN=actP PE=1 SV=1
Length = 827
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIEA 66
V+L + A ++FN + LR ++E G+ R+ + ++GM C SCV ++E
Sbjct: 48 VNLATERATVQFNGVPETTSVLR-AVEKAGYAPRIVTEE----IQIEGMTCASCVSRVEK 102
Query: 67 TIGEKPGVIAVKVS 80
+ PGV V+
Sbjct: 103 ALKAVPGVADASVN 116
Score = 36.2 bits (82), Expect = 0.054, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 41 LPSTNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
LP + D F ++GM C SCV+++E I PGV + V+
Sbjct: 13 LPMSFD---FDIEGMTCASCVRRVEKAIAAVPGVASANVN 49
>sp|O32221|COPZ_BACSU Copper chaperone CopZ OS=Bacillus subtilis (strain 168) GN=copZ
PE=1 SV=1
Length = 69
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKV 79
T V+GM CQ CVK +E ++GE GV AV V
Sbjct: 5 TLQVEGMSCQHCVKAVETSVGELDGVSAVHV 35
>sp|O32220|COPA_BACSU Copper-exporting P-type ATPase A OS=Bacillus subtilis (strain 168)
GN=copA PE=1 SV=2
Length = 802
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIEA 66
V+L + +N+ ++P T ++ IE +G+ ++A F ++GM C +C +IE
Sbjct: 38 VNLATETSNVIYDPAETGTAAIQEKIEKLGYHV----VTEKAEFDIEGMTCAACANRIEK 93
Query: 67 TIGEKPGVIAVKVS 80
+ + GV V+
Sbjct: 94 RLNKIEGVANAPVN 107
>sp|P58341|ATCU1_RHIME Copper-transporting ATPase 1 OS=Rhizobium meliloti (strain 1021)
GN=actP1 PE=3 SV=1
Length = 826
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 39 ARLPSTNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
A +P+ D F ++GM C SCV+++E I PGV + V+
Sbjct: 11 AAVPAPTD---FGIEGMTCASCVRRVEKAISAVPGVASATVN 49
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIEA 66
V+L + A+++F L ++IE G++ ++ F ++GM C SCV ++E
Sbjct: 48 VNLATERASVQFTGAPDTGGVL-LAIEKAGYEPKVIIQE----FGIEGMTCASCVSRVEK 102
Query: 67 TIGEKPGVIAVKVS 80
+ PGV V+
Sbjct: 103 ALRTVPGVADASVN 116
>sp|Q4L970|COPA_STAHJ Copper-exporting P-type ATPase A OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=copA PE=3 SV=1
Length = 795
Score = 36.6 bits (83), Expect = 0.045, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 4 RHQVSLEQKNANIRFNPIITNEETLR---ISIEDMGFDARLPSTNDEATFTVDGMKCQSC 60
+ QV+L + A I ++ TN+ + +++ +G+D + D+A + GM C +C
Sbjct: 34 KAQVNLTTEKATIEYD---TNDYAINDFVTTVQKLGYDVVI----DKAELDITGMTCAAC 86
Query: 61 VKKIEATIGEKPGV 74
+IE + + PGV
Sbjct: 87 SNRIEKVLNKAPGV 100
>sp|P58342|ATCU2_RHIME Copper-transporting ATPase 2 OS=Rhizobium meliloti (strain 1021)
GN=actP2 PE=3 SV=1
Length = 827
Score = 36.2 bits (82), Expect = 0.064, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 39 ARLP-STNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
A LP STN F ++GM C SCV+++E I PGV + V+
Sbjct: 11 APLPVSTN----FGIEGMTCASCVRRVEKAITAVPGVASANVN 49
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 7 VSLEQKNANIRFNPIITNEETLRI--SIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKI 64
V+L + A ++F+ +TL + +IE G+ R+ + ++GM C SCV ++
Sbjct: 48 VNLATERATVQFD---GEPDTLAVLHAIEKAGYAPRIATEE----LQIEGMTCASCVSRV 100
Query: 65 EATIGEKPGVIAVKVS 80
E + PGV V+
Sbjct: 101 EKALKAVPGVADAAVN 116
>sp|P32113|COPA_ENTHA Probable copper-importing P-type ATPase A OS=Enterococcus hirae
(strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 /
NBRC 3181 / NCIMB 6459 / NCDO 1258) GN=copA PE=1 SV=2
Length = 727
Score = 35.8 bits (81), Expect = 0.069, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
TF + GM C +C +IE + E+PGV++ V+
Sbjct: 9 TFVITGMTCANCSARIEKELNEQPGVMSATVN 40
>sp|Q4A0G1|COPA_STAS1 Copper-exporting P-type ATPase A OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=copA PE=3 SV=1
Length = 794
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIEA 66
V++ + A I +NP T+ + L +IE G+ N+ A V GM C +C +IE
Sbjct: 37 VNVTTEKATISYNPESTSADDLTKTIEKTGYGV----LNETAELDVIGMTCAACSNRIEK 92
Query: 67 TIGEKPGV 74
+ GV
Sbjct: 93 VLNRTDGV 100
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40
V+L +NA I +NP T+ + L I+ +G+DA+
Sbjct: 105 VNLTTENATISYNPSATSVDALIKKIQKIGYDAQ 138
>sp|O29777|COPA_ARCFU Probable copper-exporting P-type ATPase A OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=copA PE=1 SV=1
Length = 804
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
E T V GM C CVK IE +G GV V+V+
Sbjct: 17 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVN 50
>sp|Q7A3E6|COPA_STAAN Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
N315) GN=copA PE=1 SV=1
Length = 802
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ T + + GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGV----TVETVELDITGMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMNGV 100
>sp|Q99R80|COPA_STAAM Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=copA PE=3 SV=1
Length = 802
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ T + + GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGV----TVETVELDITGMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMNGV 100
>sp|A5IVY3|COPA_STAA9 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
JH9) GN=copA PE=3 SV=1
Length = 802
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ T + + GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGV----TVETVELDITGMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMNGV 100
>sp|A6U4T8|COPA_STAA2 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
JH1) GN=copA PE=3 SV=1
Length = 802
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ T + + GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGV----TVETVELDITGMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMNGV 100
>sp|A7X6S1|COPA_STAA1 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=copA PE=3 SV=1
Length = 802
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ T + + GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGV----TVETVELDITGMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMNGV 100
>sp|P37279|ATCS_SYNE7 Cation-transporting ATPase PacS OS=Synechococcus elongatus
(strain PCC 7942) GN=pacS PE=3 SV=2
Length = 747
Score = 32.3 bits (72), Expect = 0.97, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 46 DEATFTVDGMKCQSCVKKIEATIGEKPGV 74
++ T T+ GM C +C +IEA I PGV
Sbjct: 3 NQQTLTLRGMGCAACAGRIEALIQALPGV 31
>sp|P43755|RIR2_HAEIN Ribonucleoside-diphosphate reductase subunit beta OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=nrdB PE=3 SV=2
Length = 376
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 13 NANIRFNPIITNEETLRIS------IEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIEA 66
+ +I F+ I+TNEE ++ + +D+ D++L E T+TVDG +C ++ ++
Sbjct: 133 DPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYGLYGEGTYTVDGKECVVTLRSLKK 192
Query: 67 TI 68
+
Sbjct: 193 QL 194
>sp|Q2YWA3|COPA_STAAB Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ + + + T GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGVAVETVELDIT----GMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMDGV 100
>sp|Q8NUQ9|COPA_STAAW Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MW2) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ + + + T GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGVAVETVELDIT----GMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMDGV 100
>sp|A8Z3F8|COPA_STAAT Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ + + + T GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGVAVETVELDIT----GMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMDGV 100
>sp|Q6G6B7|COPA_STAAS Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MSSA476) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ + + + T GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGVAVETVELDIT----GMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMDGV 100
>sp|Q2FDV0|COPA_STAA3 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
USA300) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ + + + T GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGVAVETVELDIT----GMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMDGV 100
>sp|A6QK47|COPA_STAAE Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
Newman) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ + + + T GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGVAVETVELDIT----GMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMDGV 100
>sp|Q5HCZ3|COPA_STAAC Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
COL) GN=copA PE=3 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ + + + T GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGVAVETVELDIT----GMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMDGV 100
>sp|Q2FV64|COPA_STAA8 Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
NCTC 8325) GN=copA PE=1 SV=1
Length = 802
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ + + + T GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDQHDVQEFINTIQHLGYGVAVETVELDIT----GMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMDGV 100
>sp|Q6GDP1|COPA_STAAR Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain
MRSA252) GN=copA PE=3 SV=1
Length = 802
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
QV+L + A + +NP + + +I+ +G+ + + + T GM C +C +IE
Sbjct: 36 QVNLTTEKATVEYNPDRHDVQEFINTIQHLGYGVAVETVELDIT----GMTCAACSSRIE 91
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 92 KVLNKMDGV 100
>sp|O32620|COPP_HELFC COP-associated protein OS=Helicobacter felis (strain ATCC 49179 /
NCTC 12436 / CS1) GN=copP PE=4 SV=1
Length = 66
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 52 VDGMKCQSCVKKIEATIGEKPGVIAVKV 79
V GM CQ CV KIE +GE GV + V
Sbjct: 7 VKGMTCQHCVDKIEKFVGELEGVSYIGV 34
>sp|P58414|CADA_LISMO Probable cadmium-transporting ATPase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=cadA PE=3
SV=1
Length = 707
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 41 LPSTNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+ + + T+ VDGM C +C K E + GV KV+
Sbjct: 1 MSKASKQTTYRVDGMSCTNCAGKFEKNVKNLEGVTDAKVN 40
>sp|Q59385|COPA_ECOLI Copper-exporting P-type ATPase A OS=Escherichia coli (strain K12)
GN=copA PE=1 SV=4
Length = 834
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 50 FTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
T+DG+ C CVK+++ ++ ++P V VS
Sbjct: 7 LTLDGLSCGHCVKRVKESLEQRPDVEQADVS 37
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 45 NDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+D + GM C SCV +++ + PGV +V+
Sbjct: 98 DDSQQLLLSGMSCASCVTRVQNALQSVPGVTQARVN 133
>sp|Q8XD24|COPA_ECO57 Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7
GN=copA PE=3 SV=3
Length = 834
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 50 FTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
T+DG+ C CVK+++ ++ ++P V VS
Sbjct: 7 LTLDGLSCGHCVKRVKESLEQRPDVEQADVS 37
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 45 NDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+D + GM C SCV +++ + PGV +V+
Sbjct: 98 DDSQQLLLSGMSCASCVTRVQNALQSVPGVTQARVN 133
>sp|P77868|Y290_HAEIN Probable cation-transporting ATPase HI_0290 OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_0290 PE=3 SV=1
Length = 722
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 41 LPSTNDEATFTVDGMKCQSCVKKIEATIGEKPGV 74
L + + + + GM CQSC +IE + +KP V
Sbjct: 4 LTPQSKKISIQIGGMTCQSCANRIEKVLNKKPFV 37
>sp|Q10876|CTPA_MYCTU Cation-transporting P-type ATPase A OS=Mycobacterium tuberculosis
GN=ctpA PE=3 SV=1
Length = 761
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 52 VDGMKCQSCVKKIEATIGEKPGVIA 76
+ GM C +C ++E+T+ + PGV A
Sbjct: 20 ISGMSCSACAHRVESTLNKLPGVRA 44
>sp|P38995|ATU2_YEAST Copper-transporting ATPase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CCC2 PE=1 SV=1
Length = 1004
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDARL-------PSTNDEATFTVDGMKCQS 59
+SL + ++ +T + I IED GFD + + E +V GM C S
Sbjct: 35 ISLVTNECQVTYDNEVTADSIKEI-IEDCGFDCEILRDSEITAISTKEGLLSVQGMTCGS 93
Query: 60 CVKKIEATIGEKPGVIAVKVS 80
CV + + GV +V VS
Sbjct: 94 CVSTVTKQVEGIEGVESVVVS 114
>sp|Q8CN02|COPA_STAES Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=copA PE=3 SV=1
Length = 794
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
+V+L + A I + + E I+ +G+D + ++ ++GM C +C +IE
Sbjct: 35 KVNLTTEKATIDYESDDYHLEDFVEQIQSLGYDVAV----EQVELNINGMTCAACSNRIE 90
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 91 KVLNQTQGV 99
>sp|Q5HL56|COPA_STAEQ Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=copA PE=3 SV=1
Length = 794
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 6 QVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIE 65
+V+L + A I + + E I+ +G+D + ++ ++GM C +C +IE
Sbjct: 35 KVNLTTEKATIDYESDDYHLEDFVEQIQSLGYDVAV----EQVELNINGMTCAACSNRIE 90
Query: 66 ATIGEKPGV 74
+ + GV
Sbjct: 91 KVLNQTQGV 99
>sp|P73241|ATCS_SYNY3 Cation-transporting ATPase PacS OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=pacS PE=1 SV=1
Length = 745
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 52 VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
++GM+C +C IE I + PGV + +V+
Sbjct: 9 LEGMRCAACASSIERAIAKVPGVQSCQVN 37
>sp|P07893|ATSY_SYNP6 Probable copper-transporting ATPase SynA OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=synA
PE=3 SV=2
Length = 790
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 52 VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
V+GMKC CV +E + + GV AV V+
Sbjct: 20 VEGMKCAGCVAAVERRLQQTAGVEAVSVN 48
>sp|P37385|ATSY_SYNE7 Probable copper-transporting ATPase SynA OS=Synechococcus
elongatus (strain PCC 7942) GN=synA PE=3 SV=1
Length = 790
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 52 VDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
V+GMKC CV +E + + GV AV V+
Sbjct: 20 VEGMKCAGCVAAVERRLQQTAGVEAVSVN 48
>sp|P55989|COPA_HELPY Copper-transporting ATPase OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=copA PE=3 SV=1
Length = 745
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+F ++GM C +C IE ++G K V ++VS
Sbjct: 4 SFYIEGMTCTACSSGIERSLGRKSFVKKIEVS 35
Score = 28.9 bits (63), Expect = 8.6, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATF 50
K+ +VSL K+ANI F+ TN + + IE +G+ + T ++ F
Sbjct: 30 KKIEVSLLNKSANIEFDENQTNLDEIFKLIEKLGYSPKKALTKEKKEF 77
>sp|Q48271|COPP_HELPY COP-associated protein OS=Helicobacter pylori (strain ATCC 700392
/ 26695) GN=copP PE=1 SV=2
Length = 66
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 48 ATFTVDGMKCQSCVKKIEATIGEKPGV 74
ATF V + C CV KIE +GE GV
Sbjct: 3 ATFQVPSITCNHCVDKIEKFVGEIEGV 29
>sp|Q59467|COPA2_HELPX Copper-transporting ATPase OS=Helicobacter pylori GN=copA PE=3
SV=1
Length = 741
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80
+F ++GM C +C IE ++G K V ++VS
Sbjct: 4 SFYIEGMTCTACSSGIERSLGRKSFVKKIEVS 35
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,157,746
Number of Sequences: 539616
Number of extensions: 933240
Number of successful extensions: 2517
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2342
Number of HSP's gapped (non-prelim): 175
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)