Query psy13020
Match_columns 81
No_of_seqs 118 out of 1437
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 17:20:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ew9_A Copper-transporting ATP 99.5 2.7E-13 9.1E-18 73.6 9.4 78 4-81 34-115 (149)
2 1p6t_A Potential copper-transp 99.4 1.5E-12 5.2E-17 70.9 8.4 74 4-81 36-109 (151)
3 2rop_A Copper-transporting ATP 99.3 4E-11 1.4E-15 68.4 10.0 78 4-81 50-157 (202)
4 4a4j_A Pacszia, cation-transpo 99.0 1.7E-09 5.8E-14 51.6 5.2 36 46-81 2-37 (69)
5 3dxs_X Copper-transporting ATP 99.0 1.5E-09 5.2E-14 52.5 4.9 35 47-81 3-37 (74)
6 3iwl_A Copper transport protei 98.9 2.8E-09 9.4E-14 51.0 3.8 33 47-81 3-35 (68)
7 3fry_A Probable copper-exporti 98.8 4.4E-09 1.5E-13 50.9 4.2 35 46-81 5-39 (73)
8 1mwy_A ZNTA; open-faced beta-s 98.8 1.8E-08 6E-13 48.3 4.9 35 47-81 4-38 (73)
9 2g9o_A Copper-transporting ATP 98.8 1.7E-08 5.9E-13 50.7 5.0 36 46-81 3-38 (90)
10 2xmw_A PACS-N, cation-transpor 98.7 3.1E-08 1.1E-12 46.8 5.2 36 46-81 3-38 (71)
11 2l3m_A Copper-ION-binding prot 98.7 3.7E-08 1.3E-12 46.7 5.2 36 46-81 5-40 (71)
12 3cjk_B Copper-transporting ATP 98.7 4.1E-08 1.4E-12 47.1 5.3 35 47-81 3-37 (75)
13 1osd_A MERP, hypothetical prot 98.7 3E-08 1E-12 47.1 4.7 35 47-81 4-38 (72)
14 1yg0_A COP associated protein; 98.7 2.5E-08 8.6E-13 46.5 4.1 34 48-81 3-36 (66)
15 2roe_A Heavy metal binding pro 98.7 1.2E-08 4.1E-13 48.1 2.9 33 49-81 3-35 (66)
16 2qif_A Copper chaperone COPZ; 98.7 6E-08 2E-12 45.3 5.2 35 47-81 3-37 (69)
17 2aj0_A Probable cadmium-transp 98.7 3.8E-08 1.3E-12 46.9 4.5 35 47-81 4-38 (71)
18 2xmm_A SSR2857 protein, ATX1; 98.7 1.4E-08 4.7E-13 47.2 2.7 34 48-81 3-36 (64)
19 1yjr_A Copper-transporting ATP 98.7 5.1E-08 1.8E-12 46.6 4.9 36 46-81 4-39 (75)
20 1aw0_A Menkes copper-transport 98.7 3.3E-08 1.1E-12 47.0 3.9 36 46-81 3-38 (72)
21 1cpz_A Protein (COPZ); copper 98.7 4.5E-08 1.5E-12 45.9 4.3 33 49-81 3-35 (68)
22 1fvq_A Copper-transporting ATP 98.6 4.4E-08 1.5E-12 46.5 4.1 35 47-81 3-37 (72)
23 2kt2_A Mercuric reductase; nme 98.6 4.2E-08 1.4E-12 46.3 3.8 33 49-81 3-35 (69)
24 2ldi_A Zinc-transporting ATPas 98.6 4.4E-08 1.5E-12 46.1 3.9 35 47-81 4-38 (71)
25 1y3j_A Copper-transporting ATP 98.6 3E-08 1E-12 48.0 3.2 35 47-81 4-38 (77)
26 1cc8_A Protein (metallochapero 98.6 1.2E-07 4E-12 45.7 5.2 35 46-81 5-40 (73)
27 1q8l_A Copper-transporting ATP 98.6 3.9E-08 1.3E-12 48.6 3.4 36 46-81 9-44 (84)
28 2ofg_X Zinc-transporting ATPas 98.6 1E-07 3.5E-12 49.7 5.0 36 46-81 8-43 (111)
29 1opz_A Potential copper-transp 98.6 1E-07 3.4E-12 45.5 4.7 36 46-81 6-41 (76)
30 2k2p_A Uncharacterized protein 98.6 3.7E-08 1.3E-12 49.2 2.8 36 46-81 22-57 (85)
31 1kvi_A Copper-transporting ATP 98.6 4.2E-08 1.4E-12 47.6 2.8 36 46-81 8-43 (79)
32 2kyz_A Heavy metal binding pro 98.5 7.4E-08 2.5E-12 45.4 3.4 33 48-81 3-35 (67)
33 1jww_A Potential copper-transp 98.5 8.2E-08 2.8E-12 46.5 3.5 35 47-81 4-38 (80)
34 2kkh_A Putative heavy metal tr 98.5 2.4E-07 8.2E-12 46.7 4.1 36 46-81 16-51 (95)
35 2crl_A Copper chaperone for su 98.4 4.5E-07 1.5E-11 46.3 4.6 35 46-81 19-53 (98)
36 2rop_A Copper-transporting ATP 98.4 4.8E-07 1.6E-11 51.4 4.7 36 46-81 20-55 (202)
37 2ew9_A Copper-transporting ATP 98.4 3.6E-07 1.2E-11 49.1 3.7 36 46-81 4-39 (149)
38 1p6t_A Potential copper-transp 98.3 2.1E-06 7E-11 46.3 5.2 36 46-81 6-41 (151)
39 3j09_A COPA, copper-exporting 98.2 2.5E-06 8.5E-11 56.7 5.0 35 47-81 3-37 (723)
40 1qup_A Superoxide dismutase 1 98.1 4.5E-06 1.5E-10 48.5 4.8 35 46-81 6-40 (222)
41 2ofg_X Zinc-transporting ATPas 98.0 1.1E-05 3.7E-10 41.8 4.4 51 3-57 37-87 (111)
42 1jk9_B CCS, copper chaperone f 98.0 1E-05 3.6E-10 47.8 4.6 35 46-81 7-41 (249)
43 3dxs_X Copper-transporting ATP 97.5 0.00024 8.1E-09 33.7 4.7 37 4-40 32-68 (74)
44 4a4j_A Pacszia, cation-transpo 97.4 0.0006 2.1E-08 31.7 5.0 36 4-40 32-67 (69)
45 1cpz_A Protein (COPZ); copper 97.3 0.0013 4.3E-08 30.1 5.3 38 3-40 29-66 (68)
46 2l3m_A Copper-ION-binding prot 97.2 0.0011 3.8E-08 30.6 5.0 37 3-39 34-70 (71)
47 1aw0_A Menkes copper-transport 97.2 0.0014 4.8E-08 30.3 4.9 38 3-40 32-69 (72)
48 1osd_A MERP, hypothetical prot 97.1 0.002 6.8E-08 29.8 5.2 38 3-40 32-69 (72)
49 2qif_A Copper chaperone COPZ; 97.1 0.0022 7.4E-08 29.0 5.2 36 4-39 32-67 (69)
50 3cjk_B Copper-transporting ATP 97.1 0.0024 8.3E-08 29.8 5.4 38 3-40 31-68 (75)
51 1kvi_A Copper-transporting ATP 97.0 0.0021 7.1E-08 30.4 4.9 38 3-40 37-74 (79)
52 2kt2_A Mercuric reductase; nme 97.0 0.0038 1.3E-07 28.6 5.5 38 3-41 29-66 (69)
53 1q8l_A Copper-transporting ATP 97.0 0.0036 1.2E-07 30.2 5.5 38 4-41 39-76 (84)
54 2ldi_A Zinc-transporting ATPas 96.9 0.0031 1.1E-07 28.8 4.8 36 4-39 33-68 (71)
55 2g9o_A Copper-transporting ATP 96.8 0.0046 1.6E-07 30.4 5.3 40 3-42 32-74 (90)
56 1yg0_A COP associated protein; 96.8 0.0055 1.9E-07 27.6 5.0 35 4-39 31-65 (66)
57 1opz_A Potential copper-transp 96.7 0.0045 1.6E-07 28.7 4.7 37 4-40 36-72 (76)
58 2xmw_A PACS-N, cation-transpor 96.7 0.0042 1.5E-07 28.4 4.4 37 3-40 32-68 (71)
59 1yjr_A Copper-transporting ATP 96.4 0.0043 1.5E-07 28.8 3.5 38 3-40 33-70 (75)
60 1y3j_A Copper-transporting ATP 96.4 0.0035 1.2E-07 29.5 3.1 37 4-40 33-69 (77)
61 3iwl_A Copper transport protei 96.2 0.019 6.5E-07 26.6 5.1 34 4-40 30-63 (68)
62 3fry_A Probable copper-exporti 96.2 0.004 1.4E-07 29.4 2.6 35 3-41 33-67 (73)
63 2kkh_A Putative heavy metal tr 96.2 0.019 6.4E-07 28.3 5.1 37 4-40 46-82 (95)
64 1jww_A Potential copper-transp 96.1 0.0067 2.3E-07 28.5 3.1 37 4-40 33-69 (80)
65 1fvq_A Copper-transporting ATP 96.0 0.011 3.8E-07 27.1 3.5 36 4-40 32-67 (72)
66 1mwy_A ZNTA; open-faced beta-s 95.9 0.025 8.6E-07 26.1 4.7 36 3-40 32-67 (73)
67 2kyz_A Heavy metal binding pro 95.8 0.022 7.6E-07 25.9 4.2 34 3-40 29-62 (67)
68 1cc8_A Protein (metallochapero 95.7 0.04 1.4E-06 25.6 5.0 35 3-40 34-68 (73)
69 2roe_A Heavy metal binding pro 95.2 0.047 1.6E-06 24.6 4.1 35 3-40 29-63 (66)
70 2k2p_A Uncharacterized protein 95.2 0.061 2.1E-06 26.1 4.6 34 3-39 51-84 (85)
71 2crl_A Copper chaperone for su 94.8 0.12 4E-06 25.8 5.1 35 3-40 47-81 (98)
72 2xmm_A SSR2857 protein, ATX1; 94.4 0.13 4.4E-06 22.6 4.8 34 3-39 30-63 (64)
73 3j09_A COPA, copper-exporting 93.9 0.11 3.9E-06 34.8 4.9 38 3-40 31-68 (723)
74 1qup_A Superoxide dismutase 1 86.7 2 6.9E-05 24.8 5.0 35 3-40 34-68 (222)
75 1jk9_B CCS, copper chaperone f 84.9 1.9 6.5E-05 25.4 4.4 35 3-40 35-69 (249)
76 4gwb_A Peptide methionine sulf 71.3 5.6 0.00019 22.2 3.3 27 51-80 5-31 (168)
77 3v4k_A DNA DC->DU-editing enzy 59.6 14 0.00049 21.2 3.6 30 46-75 100-129 (203)
78 3vow_A Probable DNA DC->DU-edi 53.9 19 0.00064 20.5 3.4 30 46-75 86-115 (190)
79 2raq_A Conserved protein MTH88 50.5 24 0.00081 17.8 3.8 33 7-39 44-76 (97)
80 1uwd_A Hypothetical protein TM 50.1 14 0.00047 18.4 2.3 33 48-80 46-81 (103)
81 3cq1_A Putative uncharacterize 49.9 14 0.00049 18.3 2.4 32 49-80 46-80 (103)
82 2nyt_A Probable C->U-editing e 48.3 23 0.00077 20.0 3.2 31 47-77 84-114 (190)
83 4e6k_G BFD, bacterioferritin-a 47.5 8.2 0.00028 18.3 1.1 41 24-70 10-51 (73)
84 2hiy_A Hypothetical protein; C 45.9 36 0.0012 19.0 3.8 48 22-71 21-70 (183)
85 2x3d_A SSO6206; unknown functi 45.7 25 0.00085 17.7 2.7 33 7-39 43-75 (96)
86 1gh8_A Translation elongation 39.0 37 0.0013 16.7 7.4 64 14-79 8-82 (89)
87 3bpd_A Uncharacterized protein 38.4 15 0.00053 18.6 1.3 32 8-39 45-76 (100)
88 3lno_A Putative uncharacterize 38.1 24 0.00082 17.7 2.1 35 47-81 47-85 (108)
89 2yy3_A Elongation factor 1-bet 37.7 39 0.0013 16.7 7.4 64 14-79 10-85 (91)
90 1nwa_A Peptide methionine sulf 35.0 33 0.0011 19.7 2.5 28 50-80 27-54 (203)
91 2l69_A Rossmann 2X3 fold prote 34.8 21 0.00071 18.1 1.5 32 9-40 74-105 (134)
92 3pim_A Peptide methionine sulf 33.6 43 0.0015 19.0 2.8 31 49-80 20-50 (187)
93 3bqh_A PILB, peptide methionin 33.0 35 0.0012 19.4 2.4 27 51-80 5-31 (193)
94 1yj7_A ESCJ; mixed alpha/beta, 30.9 49 0.0017 18.3 2.7 20 61-80 92-111 (171)
95 1fvg_A Peptide methionine sulf 30.6 41 0.0014 19.2 2.4 29 49-80 44-72 (199)
96 2fi0_A Conserved domain protei 30.6 40 0.0014 16.0 2.1 18 23-40 61-78 (81)
97 2y9j_Y Lipoprotein PRGK, prote 30.4 50 0.0017 18.2 2.7 20 61-80 90-109 (170)
98 1ff3_A Peptide methionine sulf 28.6 46 0.0016 19.2 2.4 29 49-80 43-71 (211)
99 2j89_A Methionine sulfoxide re 26.8 51 0.0018 19.7 2.4 29 49-80 95-123 (261)
100 4g1a_A AQ-C16C19 peptide; heli 25.8 31 0.0011 13.1 1.0 11 56-66 15-25 (32)
101 1gtd_A MTH169; synthetase, FGA 22.8 75 0.0026 15.2 6.7 68 13-80 6-78 (85)
102 2yx5_A UPF0062 protein MJ1593; 22.6 75 0.0026 15.1 8.8 68 13-80 5-78 (83)
103 3lvj_C Sulfurtransferase TUSA; 22.3 74 0.0025 15.0 3.7 26 47-72 10-35 (82)
104 3hz7_A Uncharacterized protein 22.1 79 0.0027 15.2 3.8 23 49-71 3-25 (87)
105 1f60_B Elongation factor EEF1B 21.6 88 0.003 15.5 7.6 64 14-79 13-88 (94)
106 3cnq_P Subtilisin BPN'; unclea 21.3 75 0.0025 14.6 5.0 64 9-80 6-70 (80)
107 1b64_A Elongation factor 1-bet 20.4 93 0.0032 15.3 8.2 64 14-79 10-85 (91)
No 1
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.51 E-value=2.7e-13 Score=73.62 Aligned_cols=78 Identities=27% Similarity=0.533 Sum_probs=67.0
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcccCCC----CCceEEEEeccccchhHHHHHHHHhcCCCCeeEEEE
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPS----TNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKV 79 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~~~~----~~~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~ 79 (81)
.+.+++.++++.+.+++.......+...+++.||.+.... ...+..|.+.||+|++|+..+++.|.+++||..+.+
T Consensus 34 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v 113 (149)
T 2ew9_A 34 SVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASV 113 (149)
T ss_dssp CEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCSCCSSSEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEE
T ss_pred EEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeecccccccceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEE
Confidence 5678999999999998766778899999999999864322 225678999999999999999999999999999998
Q ss_pred eC
Q psy13020 80 SH 81 (81)
Q Consensus 80 ~~ 81 (81)
|+
T Consensus 114 ~~ 115 (149)
T 2ew9_A 114 AL 115 (149)
T ss_dssp ET
T ss_pred Ec
Confidence 85
No 2
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.42 E-value=1.5e-12 Score=70.87 Aligned_cols=74 Identities=26% Similarity=0.592 Sum_probs=64.8
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcccCCCCCceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~~~~~~~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+.+++.++++.+.+++.......+...+++.||.+. ..+..|.+.||+|++|+..+++.|.+++||..+.+|+
T Consensus 36 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~----~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~ 109 (151)
T 1p6t_A 36 DANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV----TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNF 109 (151)
T ss_dssp EEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEEC----CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEET
T ss_pred EEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCccc----ccccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEc
Confidence 5678999999999998766678889999999999763 2567899999999999999999999999999988875
No 3
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.32 E-value=4e-11 Score=68.36 Aligned_cols=78 Identities=37% Similarity=0.621 Sum_probs=64.1
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhc---CCcccCCC---------------------------CCceEEEEec
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDM---GFDARLPS---------------------------TNDEATFTVD 53 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---g~~~~~~~---------------------------~~~~~~~~i~ 53 (81)
.+.+++.++++.+.+++.......+...++.+ ||.+...+ ...+..|.|.
T Consensus 50 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~ 129 (202)
T 2rop_A 50 SIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIA 129 (202)
T ss_dssp EEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEEC-----------------------------CCEEEEEEES
T ss_pred EEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEEeccccccccccccccccccccccccccccccceEEEEEEC
Confidence 57889999999999988767788999999988 36542110 0135789999
Q ss_pred cccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 54 GMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 54 g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
||+|.+|+..|++.|.+++||..+.+|+
T Consensus 130 Gm~C~~C~~~ie~~l~~~~GV~~~~v~~ 157 (202)
T 2rop_A 130 GMTCASCVHSIEGMISQLEGVQQISVSL 157 (202)
T ss_dssp CCCSTHHHHHHHHHGGGSSSEEEEEEET
T ss_pred CccCHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 9999999999999999999999999886
No 4
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=98.97 E-value=1.7e-09 Score=51.62 Aligned_cols=36 Identities=33% Similarity=0.722 Sum_probs=33.2
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 37 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNF 37 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 356899999999999999999999999999999885
No 5
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=98.96 E-value=1.5e-09 Score=52.51 Aligned_cols=35 Identities=29% Similarity=0.556 Sum_probs=32.6
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..|.+.||+|++|+..+++.|.+++|+..+.+|+
T Consensus 3 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~ 37 (74)
T 3dxs_X 3 KIQVGVTGMTCAACSNSVEAALMNVNGVFKASVAL 37 (74)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEG
T ss_pred EEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEe
Confidence 56799999999999999999999999999999885
No 6
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=98.86 E-value=2.8e-09 Score=51.04 Aligned_cols=33 Identities=21% Similarity=0.547 Sum_probs=30.7
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..|.+ ||+|.+|+.++++.|.+++|+ .+.+|+
T Consensus 3 ~~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~ 35 (68)
T 3iwl_A 3 KHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDL 35 (68)
T ss_dssp EEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEET
T ss_pred eEEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEc
Confidence 567999 999999999999999999999 999886
No 7
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=98.85 E-value=4.4e-09 Score=50.93 Aligned_cols=35 Identities=23% Similarity=0.619 Sum_probs=32.4
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||+|.+|+..+++.|.+ +|+..+.+|+
T Consensus 5 ~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~ 39 (73)
T 3fry_A 5 EKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDL 39 (73)
T ss_dssp EEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECS
T ss_pred EEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEc
Confidence 4678999999999999999999999 9999999886
No 8
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=98.77 E-value=1.8e-08 Score=48.34 Aligned_cols=35 Identities=31% Similarity=0.674 Sum_probs=32.6
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~ 38 (73)
T 1mwy_A 4 RYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLF 38 (73)
T ss_dssp EEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEET
T ss_pred EEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEe
Confidence 56799999999999999999999999999999885
No 9
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=98.77 E-value=1.7e-08 Score=50.72 Aligned_cols=36 Identities=44% Similarity=0.721 Sum_probs=33.1
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||+|.+|+..+++.|.+++||..+.+|+
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l 38 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSL 38 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEET
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEc
Confidence 356799999999999999999999999999999885
No 10
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=98.74 E-value=3.1e-08 Score=46.84 Aligned_cols=36 Identities=31% Similarity=0.731 Sum_probs=32.8
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..+.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 38 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNF 38 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 356799999999999999999999999999998885
No 11
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=98.72 E-value=3.7e-08 Score=46.70 Aligned_cols=36 Identities=42% Similarity=0.728 Sum_probs=32.8
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 5 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 40 (71)
T 2l3m_A 5 EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQL 40 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred EEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEe
Confidence 356799999999999999999999999999998875
No 12
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=98.71 E-value=4.1e-08 Score=47.13 Aligned_cols=35 Identities=49% Similarity=0.780 Sum_probs=32.3
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 37 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSL 37 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 45789999999999999999999999999998875
No 13
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=98.71 E-value=3e-08 Score=47.07 Aligned_cols=35 Identities=31% Similarity=0.616 Sum_probs=32.4
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 38 (72)
T 1osd_A 4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTF 38 (72)
T ss_dssp EEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEET
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 56799999999999999999999999999998875
No 14
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=98.70 E-value=2.5e-08 Score=46.53 Aligned_cols=34 Identities=47% Similarity=0.755 Sum_probs=31.4
Q ss_pred EEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 48 ATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 48 ~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 36 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSV 36 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEET
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEc
Confidence 4688999999999999999999999999998875
No 15
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=98.69 E-value=1.2e-08 Score=48.08 Aligned_cols=33 Identities=36% Similarity=0.723 Sum_probs=30.7
Q ss_pred EEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 49 ~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 35 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSL 35 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECS
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEe
Confidence 588999999999999999999999999988875
No 16
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=98.68 E-value=6e-08 Score=45.27 Aligned_cols=35 Identities=49% Similarity=0.865 Sum_probs=31.9
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..+.+.||+|.+|+..+++.|..++|+..+.+|+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~ 37 (69)
T 2qif_A 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNL 37 (69)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEe
Confidence 35789999999999999999999999999988875
No 17
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=98.68 E-value=3.8e-08 Score=46.94 Aligned_cols=35 Identities=31% Similarity=0.669 Sum_probs=32.3
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~ 38 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNF 38 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 45789999999999999999999999999998875
No 18
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=98.67 E-value=1.4e-08 Score=47.18 Aligned_cols=34 Identities=18% Similarity=0.457 Sum_probs=31.3
Q ss_pred EEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 48 ATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 48 ~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 36 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDL 36 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECT
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 4688999999999999999999999999998875
No 19
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=98.67 E-value=5.1e-08 Score=46.61 Aligned_cols=36 Identities=33% Similarity=0.658 Sum_probs=32.9
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~ 39 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVAL 39 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEET
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEe
Confidence 456799999999999999999999999999998875
No 20
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=98.66 E-value=3.3e-08 Score=46.95 Aligned_cols=36 Identities=47% Similarity=0.919 Sum_probs=32.6
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..+.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 38 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSL 38 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEET
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 356799999999999999999999999999888875
No 21
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=98.66 E-value=4.5e-08 Score=45.92 Aligned_cols=33 Identities=45% Similarity=0.857 Sum_probs=30.8
Q ss_pred EEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 49 ~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+.+.||+|.+|...+++.|.+++|+..+.+|+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 35 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQL 35 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEET
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEe
Confidence 588999999999999999999999999998875
No 22
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=98.65 E-value=4.4e-08 Score=46.51 Aligned_cols=35 Identities=29% Similarity=0.602 Sum_probs=31.7
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~ 37 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISL 37 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBT
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 45789999999999999999999999999888774
No 23
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=98.63 E-value=4.2e-08 Score=46.30 Aligned_cols=33 Identities=30% Similarity=0.676 Sum_probs=30.8
Q ss_pred EEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 49 ~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 35 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSY 35 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEET
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEc
Confidence 478999999999999999999999999998885
No 24
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=98.63 E-value=4.4e-08 Score=46.11 Aligned_cols=35 Identities=29% Similarity=0.593 Sum_probs=32.1
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..+.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 38 (71)
T 2ldi_A 4 TQQMQVGGMRCAACASSIERALERLKGVAEASVTV 38 (71)
T ss_dssp EEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEET
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEe
Confidence 45799999999999999999999999999988875
No 25
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=98.62 E-value=3e-08 Score=47.97 Aligned_cols=35 Identities=31% Similarity=0.649 Sum_probs=31.8
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~ 38 (77)
T 1y3j_A 4 KCYIQVTGMTCASCVANIERNLRREEGIYSILVAL 38 (77)
T ss_dssp EEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBT
T ss_pred EEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 46799999999999999999999999999887764
No 26
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=98.62 E-value=1.2e-07 Score=45.67 Aligned_cols=35 Identities=20% Similarity=0.424 Sum_probs=32.0
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCC-CeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKP-GVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~-gv~~~~~~~ 81 (81)
.+..|.+. |+|.+|+..+++.|.+++ |+..+.+|+
T Consensus 5 ~~~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~ 40 (73)
T 1cc8_A 5 KHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISL 40 (73)
T ss_dssp EEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEET
T ss_pred eEEEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEEC
Confidence 35679999 999999999999999999 999999886
No 27
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=98.61 E-value=3.9e-08 Score=48.57 Aligned_cols=36 Identities=42% Similarity=0.692 Sum_probs=33.4
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~ 44 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSL 44 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECS
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEe
Confidence 467899999999999999999999999999998875
No 28
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.60 E-value=1e-07 Score=49.69 Aligned_cols=36 Identities=33% Similarity=0.583 Sum_probs=33.2
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||.|..|+..+++.|.+++||..+.+|+
T Consensus 8 ~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~ 43 (111)
T 2ofg_X 8 KTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTV 43 (111)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEET
T ss_pred eEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEC
Confidence 456799999999999999999999999999999885
No 29
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=98.60 E-value=1e-07 Score=45.55 Aligned_cols=36 Identities=33% Similarity=0.681 Sum_probs=32.7
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..+.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 6 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 41 (76)
T 1opz_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNL 41 (76)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEG
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 456799999999999999999999999999988874
No 30
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=98.57 E-value=3.7e-08 Score=49.17 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=33.3
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||+|..|+..+++.|.+++|+..+.+|+
T Consensus 22 ~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l 57 (85)
T 2k2p_A 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADP 57 (85)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEET
T ss_pred cEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEEC
Confidence 466899999999999999999999999999999885
No 31
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=98.57 E-value=4.2e-08 Score=47.62 Aligned_cols=36 Identities=47% Similarity=0.779 Sum_probs=32.9
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..+.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 8 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 43 (79)
T 1kvi_A 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSL 43 (79)
T ss_dssp EEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEG
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 467899999999999999999999999999888874
No 32
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=98.55 E-value=7.4e-08 Score=45.44 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.3
Q ss_pred EEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 48 ATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 48 ~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
..+.+.||+|.+|+..+++.|.++ |+..+.+|+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~ 35 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSV 35 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEET
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEEC
Confidence 468899999999999999999999 999888875
No 33
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=98.54 E-value=8.2e-08 Score=46.49 Aligned_cols=35 Identities=31% Similarity=0.726 Sum_probs=31.3
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~ 38 (80)
T 1jww_A 4 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNF 38 (80)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCS
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 45799999999999999999999999998877664
No 34
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=98.46 E-value=2.4e-07 Score=46.72 Aligned_cols=36 Identities=31% Similarity=0.350 Sum_probs=32.9
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||+|.+|+..++..|..++|+..+.+|+
T Consensus 16 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~ 51 (95)
T 2kkh_A 16 QKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIV 51 (95)
T ss_dssp EEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEET
T ss_pred EEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEc
Confidence 356899999999999999999999999999998875
No 35
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=4.5e-07 Score=46.34 Aligned_cols=35 Identities=34% Similarity=0.582 Sum_probs=32.5
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.|. |+|.+|+.+|++.|.+++||..+.+||
T Consensus 19 ~~~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl 53 (98)
T 2crl_A 19 CTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHL 53 (98)
T ss_dssp EEEEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEET
T ss_pred eEEEEEEe-eECHHHHHHHHHHHHcCCCceEEEEEC
Confidence 46789999 999999999999999999999999886
No 36
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.39 E-value=4.8e-07 Score=51.37 Aligned_cols=36 Identities=42% Similarity=0.733 Sum_probs=33.1
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.|.||+|.+|+..+++.|.+++||..+.+|+
T Consensus 20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~ 55 (202)
T 2rop_A 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSL 55 (202)
T ss_dssp CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEET
T ss_pred EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 456799999999999999999999999999998875
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=98.37 E-value=3.6e-07 Score=49.15 Aligned_cols=36 Identities=33% Similarity=0.705 Sum_probs=32.5
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 4 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~ 39 (149)
T 2ew9_A 4 QKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVAL 39 (149)
T ss_dssp EEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEET
T ss_pred EEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 456799999999999999999999999998888775
No 38
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.27 E-value=2.1e-06 Score=46.32 Aligned_cols=36 Identities=33% Similarity=0.681 Sum_probs=32.4
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..+.+.||+|.+|+..+++.|.+++|+..+.+|+
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~ 41 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNL 41 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEG
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEc
Confidence 456799999999999999999999999998888774
No 39
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.18 E-value=2.5e-06 Score=56.73 Aligned_cols=35 Identities=46% Similarity=0.760 Sum_probs=32.7
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
+..+.+.||+|++|+..+++.+.+.+||..+++|+
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl 37 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNL 37 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEc
Confidence 45799999999999999999999999999999986
No 40
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.13 E-value=4.5e-06 Score=48.53 Aligned_cols=35 Identities=31% Similarity=0.701 Sum_probs=32.2
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+. |+|.+|+.++++.|.+++||..+++|+
T Consensus 6 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl 40 (222)
T 1qup_A 6 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDI 40 (222)
T ss_dssp EEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEET
T ss_pred eEEEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEc
Confidence 45679999 999999999999999999999999986
No 41
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=98.00 E-value=1.1e-05 Score=41.85 Aligned_cols=51 Identities=18% Similarity=0.358 Sum_probs=43.2
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcccCCCCCceEEEEeccccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARLPSTNDEATFTVDGMKC 57 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~~~~~~~~~~~~i~g~~c 57 (81)
.++.+++.++++.|.|++.....+.+...++.+||.+.. ....+.|.||.|
T Consensus 37 ~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~----~~~~l~V~G~~~ 87 (111)
T 2ofg_X 37 AEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE----PKSSVTLNGHKH 87 (111)
T ss_dssp EEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC----CCCCCCCCCCCC
T ss_pred eEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee----cceeeeccCccC
Confidence 367899999999999998767789999999999998753 235689999999
No 42
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=97.98 E-value=1e-05 Score=47.76 Aligned_cols=35 Identities=31% Similarity=0.701 Sum_probs=32.2
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEeC
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVSH 81 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~~ 81 (81)
.+..|.+. |+|.+|+.++++.|.+++||..+.+|+
T Consensus 7 ~~~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl 41 (249)
T 1jk9_B 7 YEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDI 41 (249)
T ss_dssp EEEEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEET
T ss_pred eeEEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEc
Confidence 35679999 999999999999999999999999986
No 43
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=97.53 E-value=0.00024 Score=33.69 Aligned_cols=37 Identities=38% Similarity=0.683 Sum_probs=33.7
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
++.+++.++++.|.|++..+..+++.+.++..||.+.
T Consensus 32 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 68 (74)
T 3dxs_X 32 KASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAE 68 (74)
T ss_dssp EEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred EEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceE
Confidence 5789999999999999877789999999999999874
No 44
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=97.39 E-value=0.0006 Score=31.73 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=31.8
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
++.+++.++++.+.| +.....+++.+.+++.||.+.
T Consensus 32 ~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~Gy~~~ 67 (69)
T 4a4j_A 32 SCQVNFALEQAVVSY-HGETTPQILTDAVERAGYHAR 67 (69)
T ss_dssp EEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTTCEEE
T ss_pred EEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcCCceE
Confidence 578999999999999 556789999999999999864
No 45
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=97.25 E-value=0.0013 Score=30.05 Aligned_cols=38 Identities=21% Similarity=0.482 Sum_probs=32.9
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+.+++.....+.+...++..||.+.
T Consensus 29 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 29 KKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAE 66 (68)
T ss_dssp EEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEE
T ss_pred EEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 35789999999999998876788999999999999863
No 46
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=97.23 E-value=0.0011 Score=30.61 Aligned_cols=37 Identities=19% Similarity=0.410 Sum_probs=32.2
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA 39 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~ 39 (81)
.++.+++.++++.+.|++.....+.+...++..||.+
T Consensus 34 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 34 EQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred EEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 3578899999999999887678899999999999975
No 47
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=97.17 E-value=0.0014 Score=30.30 Aligned_cols=38 Identities=50% Similarity=0.815 Sum_probs=32.9
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+.+++.....+.+...++..||.+.
T Consensus 32 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (72)
T 1aw0_A 32 KSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDAT 69 (72)
T ss_dssp CCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred EEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcE
Confidence 46789999999999998876778899999999999864
No 48
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=97.11 E-value=0.002 Score=29.75 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=33.0
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+.|++.....+.+...++..||.+.
T Consensus 32 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (72)
T 1osd_A 32 SKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSS 69 (72)
T ss_dssp EEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCE
T ss_pred EEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeE
Confidence 36789999999999998876788999999999999864
No 49
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=97.10 E-value=0.0022 Score=29.05 Aligned_cols=36 Identities=25% Similarity=0.430 Sum_probs=31.7
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA 39 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~ 39 (81)
++.+++.++++.+.+++.....+.+...++..||.+
T Consensus 32 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 32 AVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred EEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 577899999999999887778889999999999975
No 50
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=97.08 E-value=0.0024 Score=29.84 Aligned_cols=38 Identities=47% Similarity=0.741 Sum_probs=33.0
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+.+++.....+.+...++..||.+.
T Consensus 31 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 68 (75)
T 3cjk_B 31 HHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAV 68 (75)
T ss_dssp EEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEE
T ss_pred EEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceE
Confidence 35789999999999998876788999999999999864
No 51
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=97.03 E-value=0.0021 Score=30.44 Aligned_cols=38 Identities=47% Similarity=0.741 Sum_probs=33.0
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+.+++.....+.+...++.+||.+.
T Consensus 37 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 74 (79)
T 1kvi_A 37 HHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAV 74 (79)
T ss_dssp CCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEE
T ss_pred EEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceE
Confidence 46789999999999998876778899999999999864
No 52
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=96.98 E-value=0.0038 Score=28.58 Aligned_cols=38 Identities=24% Similarity=0.412 Sum_probs=32.5
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcccC
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARL 41 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~~ 41 (81)
.++.+++.++++.+.+++. ...+.+...++.+||.+..
T Consensus 29 ~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~ 66 (69)
T 2kt2_A 29 QSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLGYKATL 66 (69)
T ss_dssp EEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTTSEEEC
T ss_pred eEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCCCceEe
Confidence 3678999999999999876 5788999999999998643
No 53
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=96.97 E-value=0.0036 Score=30.21 Aligned_cols=38 Identities=37% Similarity=0.608 Sum_probs=33.2
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcccC
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARL 41 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~~ 41 (81)
++.+++.++++.+.+++.......+...++.+||.+.+
T Consensus 39 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 76 (84)
T 1q8l_A 39 RIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFV 76 (84)
T ss_dssp EEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEC
T ss_pred EEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEe
Confidence 57889999999999988767889999999999998753
No 54
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=96.92 E-value=0.0031 Score=28.77 Aligned_cols=36 Identities=17% Similarity=0.385 Sum_probs=31.5
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA 39 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~ 39 (81)
++.+++.++++.+.+++.....+.+...++..||.+
T Consensus 33 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 68 (71)
T 2ldi_A 33 EASVTVATGRLTVTYDPKQVSEITIQERIAALGYTL 68 (71)
T ss_dssp EEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEE
T ss_pred EEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 578899999999999876677888999999999975
No 55
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=96.84 E-value=0.0046 Score=30.44 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=33.7
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhc---CCcccCC
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDM---GFDARLP 42 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~---g~~~~~~ 42 (81)
.++.+++.++++.+.+++..+..+.+...++.+ ||.+.+.
T Consensus 32 ~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~ 74 (90)
T 2g9o_A 32 SSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSIT 74 (90)
T ss_dssp EEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECC
T ss_pred eEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEe
Confidence 367899999999999988767788999999999 5987643
No 56
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=96.76 E-value=0.0055 Score=27.60 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=30.3
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA 39 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~ 39 (81)
++.+++.++++.+.+++.. ..+.+.+.++..||.+
T Consensus 31 ~~~v~~~~~~~~v~~~~~~-~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 31 FIDVSVEKKSVVVEFDAPA-TQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEEEETTTTEEEEEECTTC-CHHHHHHHHHHHTCCC
T ss_pred EEEEEcCCCEEEEEECCCC-CHHHHHHHHHHcCCCc
Confidence 5788999999999998764 7888999999999974
No 57
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=96.73 E-value=0.0045 Score=28.68 Aligned_cols=37 Identities=22% Similarity=0.468 Sum_probs=32.3
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
++.+++.++++.+.+++.....+.+...++..||.+.
T Consensus 36 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 72 (76)
T 1opz_A 36 DANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVV 72 (76)
T ss_dssp EEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEE
T ss_pred EEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCcee
Confidence 5788999999999998876778899999999999864
No 58
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=96.71 E-value=0.0042 Score=28.44 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=29.7
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+.+++. ...+.+...++..||.+.
T Consensus 32 ~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~~ 68 (71)
T 2xmw_A 32 QSCQVNFALEQAVVSYHGE-TTPQILTDAVERAGYHAR 68 (71)
T ss_dssp EEEEEETTTTEEEEEEC----CHHHHHHHHHHHTCEEE
T ss_pred EEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcCCCce
Confidence 3678999999999999875 678899999999999753
No 59
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=96.44 E-value=0.0043 Score=28.77 Aligned_cols=38 Identities=26% Similarity=0.512 Sum_probs=32.0
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++.+.+.+++.......+...++.+||.+.
T Consensus 33 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 70 (75)
T 1yjr_A 33 LYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPS 70 (75)
T ss_dssp EEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEE
T ss_pred EEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCce
Confidence 36788999999999998866667889999999999763
No 60
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=96.43 E-value=0.0035 Score=29.50 Aligned_cols=37 Identities=27% Similarity=0.478 Sum_probs=31.5
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
++.+++.++++.+.+++.......+...++.+||.+.
T Consensus 33 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 69 (77)
T 1y3j_A 33 SILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGAT 69 (77)
T ss_dssp ECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEE
T ss_pred EEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceE
Confidence 4567899999999998876778899999999999863
No 61
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=96.24 E-value=0.019 Score=26.56 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=29.5
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
++.+++.++++.+.++ ...+++.+.+++.||.+.
T Consensus 30 ~v~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~ 63 (68)
T 3iwl_A 30 KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVS 63 (68)
T ss_dssp EEEEETTTTEEEEEES---SCHHHHHHHHHTTCSCEE
T ss_pred EEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCceE
Confidence 5789999999999973 468999999999999875
No 62
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=96.20 E-value=0.004 Score=29.37 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=30.0
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcccC
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDARL 41 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~~ 41 (81)
..+.+++.++++.|.++ ....+.+.++.+||.+..
T Consensus 33 ~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~Gy~~~~ 67 (73)
T 3fry_A 33 KVEKVDLNEAVVAGNKE----DVDKYIKAVEAAGYQAKL 67 (73)
T ss_dssp EEEEECSSEEEEEEEGG----GHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEccCCEEEEEEC----CHHHHHHHHHHcCCceEe
Confidence 35788999999999988 578999999999998754
No 63
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=96.17 E-value=0.019 Score=28.29 Aligned_cols=37 Identities=5% Similarity=0.186 Sum_probs=32.2
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.+.+++.++.+.+.+++.......+...++.+||.+.
T Consensus 46 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~ 82 (95)
T 2kkh_A 46 EYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEAN 82 (95)
T ss_dssp EEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEE
T ss_pred EEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceE
Confidence 5788999999999998866678899999999999864
No 64
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=96.10 E-value=0.0067 Score=28.50 Aligned_cols=37 Identities=14% Similarity=0.444 Sum_probs=31.4
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
++.+++.++++.+.+++.....+.+...++..||.+.
T Consensus 33 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (80)
T 1jww_A 33 NAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLK 69 (80)
T ss_dssp ECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEE
T ss_pred EEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEE
Confidence 4567899999999998876778899999999999864
No 65
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=95.98 E-value=0.011 Score=27.07 Aligned_cols=36 Identities=22% Similarity=0.497 Sum_probs=30.5
Q ss_pred eEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 4 RHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 4 ~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
++.+++.++++.+.++ .....+.+...++..||.+.
T Consensus 32 ~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G~~~~ 67 (72)
T 1fvq_A 32 KCDISLVTNECQVTYD-NEVTADSIKEIIEDCGFDCE 67 (72)
T ss_dssp EECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHTCCEE
T ss_pred EEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCCCceE
Confidence 5678899999999998 55678899999999999864
No 66
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=95.91 E-value=0.025 Score=26.10 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=30.3
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+.+++. ..+.+...++.+||.+.
T Consensus 32 ~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~Gy~~~ 67 (73)
T 1mwy_A 32 NQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLR 67 (73)
T ss_dssp EEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCEEE
T ss_pred eEEEEEecCCEEEEEECCC--CHHHHHHHHHHcCCccc
Confidence 3678999999999999874 37889999999999864
No 67
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=95.83 E-value=0.022 Score=25.91 Aligned_cols=34 Identities=18% Similarity=0.394 Sum_probs=28.7
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+.+++. +.+...++..||.+.
T Consensus 29 ~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~Gy~~~ 62 (67)
T 2kyz_A 29 KNYEVSVEEKKVVVETENL----DSVLKKLEEIDYPVE 62 (67)
T ss_dssp SEEEEETTTTEEEEECSCH----HHHHHHHHTTTCCCC
T ss_pred eEEEEECCCCEEEEEECCH----HHHHHHHHHcCCcee
Confidence 3678999999999998763 788999999999864
No 68
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=95.73 E-value=0.04 Score=25.62 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=29.6
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+.++ .+.+++.+.+++.||.+.
T Consensus 34 ~~~~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~ 68 (73)
T 1cc8_A 34 SKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVR 68 (73)
T ss_dssp EEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEE
T ss_pred eEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCCce
Confidence 36789999999999973 468899999999999864
No 69
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=95.21 E-value=0.047 Score=24.62 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=28.6
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+ + .....+.+.+.++..||.+.
T Consensus 29 ~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~Gy~~~ 63 (66)
T 2roe_A 29 EKVEVSLEKGEALV--E-GTADPKALVQAVEEEGYKAE 63 (66)
T ss_dssp CCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTTCEEE
T ss_pred EEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcCCCcE
Confidence 36788999999999 3 34678999999999999863
No 70
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=95.16 E-value=0.061 Score=26.13 Aligned_cols=34 Identities=6% Similarity=0.086 Sum_probs=28.6
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA 39 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~ 39 (81)
.++.+++.++++.+.++ ...+.+.+.++++||.+
T Consensus 51 ~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 51 AAVHADPASRTVVVGGV---SDAAHIAEIITAAGYTP 84 (85)
T ss_dssp CEEEEETTTTEEEEESC---CCHHHHHHHHHHTTCCC
T ss_pred eEEEEECCCCEEEEEec---CCHHHHHHHHHHcCCCC
Confidence 36789999999999863 46889999999999975
No 71
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.77 E-value=0.12 Score=25.84 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=29.9
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.++|.++++.|.++ ...+.|.+.++++||.+.
T Consensus 47 ~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~Gy~~~ 81 (98)
T 2crl_A 47 QDVEVHLEDQMVLVHTT---LPSQEVQALLEGTGRQAV 81 (98)
T ss_dssp CEEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEE
T ss_pred eEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCceE
Confidence 36889999999999984 467899999999999864
No 72
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=94.43 E-value=0.13 Score=22.60 Aligned_cols=34 Identities=32% Similarity=0.459 Sum_probs=27.3
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDA 39 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~ 39 (81)
.++.+++.++++.+.. ....+.+...++.+||.+
T Consensus 30 ~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 30 ATVQVDLTSKKVTITS---ALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp CEEEECTTTCEEEEEC---SSCHHHHHHHHHHTTCCC
T ss_pred EEEEEEecCCEEEEEe---cCCHHHHHHHHHHcCCCC
Confidence 3578899999999884 246788999999999975
No 73
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=93.92 E-value=0.11 Score=34.81 Aligned_cols=38 Identities=32% Similarity=0.476 Sum_probs=34.3
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+|+.++++.+.|++.....+++.+.+++.||++.
T Consensus 31 ~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~ 68 (723)
T 3j09_A 31 EEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVV 68 (723)
T ss_dssp EEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEES
T ss_pred eEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccc
Confidence 36789999999999999887889999999999999864
No 74
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=86.67 E-value=2 Score=24.78 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=29.5
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.+... ..++++.+.++++||.+.
T Consensus 34 ~~v~Vnl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~ 68 (222)
T 1qup_A 34 NSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAI 68 (222)
T ss_dssp EEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCE
T ss_pred eEEEEEcCCCEEEEecc---CCHHHHHHHHHHcCCccc
Confidence 36789999999999863 467899999999999864
No 75
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=84.91 E-value=1.9 Score=25.37 Aligned_cols=35 Identities=17% Similarity=0.222 Sum_probs=29.3
Q ss_pred ceEEEEecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 3 KRHQVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 3 ~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
.++.+++.++++.|... ..++++.++++++||.+.
T Consensus 35 ~~v~Vnl~~~~v~V~~~---~~~~~I~~aIe~~Gy~a~ 69 (249)
T 1jk9_B 35 NSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAI 69 (249)
T ss_dssp EEEEEETTTTEEEEEES---SCHHHHHHHHHTTTCCCE
T ss_pred eEEEEEcCCCeEEEecC---CCHHHHHHHHHHhCCCcc
Confidence 36789999999999853 467899999999999864
No 76
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=71.29 E-value=5.6 Score=22.15 Aligned_cols=27 Identities=30% Similarity=0.389 Sum_probs=20.4
Q ss_pred EeccccchhHHHHHHHHhcCCCCeeEEEEe
Q psy13020 51 TVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 51 ~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
.+.|+.|-+|. +..+.+++||..+.+.
T Consensus 5 A~fagGCFWg~---E~~f~~l~GV~~t~~G 31 (168)
T 4gwb_A 5 AVLAGGCFWGM---QDLIRKLPGVIETRVG 31 (168)
T ss_dssp EEEEESCHHHH---HHHHTTSTTEEEEEEE
T ss_pred EEEEccCccch---HHHHhcCCCeEEEEEE
Confidence 34567888886 4578889999988765
No 77
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=59.57 E-value=14 Score=21.21 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=25.3
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCee
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVI 75 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~ 75 (81)
-++++-++=-.|..|+.++.+-|...+.|.
T Consensus 100 Y~vTwy~SWSPC~~CA~~v~~FL~~~~~v~ 129 (203)
T 3v4k_A 100 YRVTCFTSWSPCFSCAQEMAKFISKNKHVS 129 (203)
T ss_pred EEEEEEEeCCChHHHHHHHHHHHhhCCCeE
Confidence 466777888889999999999999888754
No 78
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=53.93 E-value=19 Score=20.49 Aligned_cols=30 Identities=13% Similarity=0.310 Sum_probs=25.1
Q ss_pred ceEEEEeccccchhHHHHHHHHhcCCCCee
Q psy13020 46 DEATFTVDGMKCQSCVKKIEATIGEKPGVI 75 (81)
Q Consensus 46 ~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~ 75 (81)
-++++-+.=-.|..|+.+|.+-|.+.+.|.
T Consensus 86 y~VTwy~SwSPC~~CA~~va~FL~~~~~v~ 115 (190)
T 3vow_A 86 YQVTWYTSWSPCPDCAGEVAEFLARHSNVN 115 (190)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHCTTEE
T ss_pred EEEEEEEeCCchHHHHHHHHHHHHhCCCeE
Confidence 366777888889999999999999888753
No 79
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=50.51 E-value=24 Score=17.85 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=27.1
Q ss_pred EEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcc
Q psy13020 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDA 39 (81)
Q Consensus 7 v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~ 39 (81)
++..+++..+......++.+++.+++++.|-.+
T Consensus 44 vD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~I 76 (97)
T 2raq_A 44 IDKETENIKVTIQGNDLDFDEITRAIESYGGSI 76 (97)
T ss_dssp ECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEE
T ss_pred eeccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence 446677888888877789999999999998664
No 80
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=50.10 E-value=14 Score=18.37 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=22.0
Q ss_pred EEEEeccccchhH---HHHHHHHhcCCCCeeEEEEe
Q psy13020 48 ATFTVDGMKCQSC---VKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 48 ~~~~i~g~~c~~C---~~~i~~~l~~~~gv~~~~~~ 80 (81)
+.+.+.-..|+.- ...++++|.+++|+..+.++
T Consensus 46 v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~ 81 (103)
T 1uwd_A 46 VLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVE 81 (103)
T ss_dssp EEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEE
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEE
Confidence 4444555556642 34567788899999988875
No 81
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=49.87 E-value=14 Score=18.32 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=21.1
Q ss_pred EEEeccccchh---HHHHHHHHhcCCCCeeEEEEe
Q psy13020 49 TFTVDGMKCQS---CVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 49 ~~~i~g~~c~~---C~~~i~~~l~~~~gv~~~~~~ 80 (81)
.+.+.-..|+. =...++++|.+++|+..+.++
T Consensus 46 ~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~ 80 (103)
T 3cq1_A 46 RMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVE 80 (103)
T ss_dssp EECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEE
T ss_pred EEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEE
Confidence 33343444553 245678889999999988875
No 82
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=48.33 E-value=23 Score=20.03 Aligned_cols=31 Identities=19% Similarity=0.457 Sum_probs=24.7
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCCCeeEE
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKPGVIAV 77 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~ 77 (81)
..++-+.--.|..|+..|-..+...+||..+
T Consensus 84 g~TlYvTlePC~~Ca~aIi~al~~~~gI~rV 114 (190)
T 2nyt_A 84 NVTWYVSSSPCAACADRIIKTLSKTKNLRLL 114 (190)
T ss_pred CeEEEEEcChHHHHHHHHHHhhhhcCCccEE
Confidence 4566677778999999999998888887654
No 83
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=47.50 E-value=8.2 Score=18.32 Aligned_cols=41 Identities=22% Similarity=0.373 Sum_probs=22.9
Q ss_pred CHHHHHHHHHhcCCc-ccCCCCCceEEEEeccccchhHHHHHHHHhcC
Q psy13020 24 NEETLRISIEDMGFD-ARLPSTNDEATFTVDGMKCQSCVKKIEATIGE 70 (81)
Q Consensus 24 ~~~~i~~~i~~~g~~-~~~~~~~~~~~~~i~g~~c~~C~~~i~~~l~~ 70 (81)
+..+|.+++.. |.. +. .-....=-|+.|.+|...+.+.|..
T Consensus 10 t~~~I~~AI~~-Ga~t~~-----~v~~~t~aGt~CG~C~~~i~~il~~ 51 (73)
T 4e6k_G 10 TDNQIRDAIYE-GCCSYR-----EVREATGVGTQCGKCASLAKQVVRE 51 (73)
T ss_dssp EHHHHHHHHHT-TCCSHH-----HHHHHHCTTSSSCTTHHHHHHHHHH
T ss_pred CHHHHHHHHHh-cCCCHH-----HHHHHhCCCCCCCchHHHHHHHHHH
Confidence 45677777775 432 11 0000111256799999888877654
No 84
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=45.89 E-value=36 Score=18.97 Aligned_cols=48 Identities=17% Similarity=0.219 Sum_probs=31.7
Q ss_pred CCCHHHHHHHHHhcCCc-cc-CCCCCceEEEEeccccchhHHHHHHHHhcCC
Q psy13020 22 ITNEETLRISIEDMGFD-AR-LPSTNDEATFTVDGMKCQSCVKKIEATIGEK 71 (81)
Q Consensus 22 ~~~~~~i~~~i~~~g~~-~~-~~~~~~~~~~~i~g~~c~~C~~~i~~~l~~~ 71 (81)
.+.+.++.+.++++||. +. .+++ .-+.|.-.. .-......|++.+...
T Consensus 21 kv~MadLr~~l~~lGf~~V~TyI~S-GNvvF~s~~-~~~~l~~~ie~~l~~~ 70 (183)
T 2hiy_A 21 KVVMAELRQELTNLGLEKVESYINS-GNIFFTSID-SKAQLVEKLETFFAVH 70 (183)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEETTT-TEEEEEECS-CHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHcCCccceEEEec-CCEEEecCC-CHHHHHHHHHHHHHHh
Confidence 46789999999999997 32 2222 345565544 4455777888777654
No 85
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=45.69 E-value=25 Score=17.74 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=25.5
Q ss_pred EEecCCeEEEEEcCCCCCHHHHHHHHHhcCCcc
Q psy13020 7 VSLEQKNANIRFNPIITNEETLRISIEDMGFDA 39 (81)
Q Consensus 7 v~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~ 39 (81)
++..+++..+......++.+++.+++++.|-.+
T Consensus 43 vD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~I 75 (96)
T 2x3d_A 43 MDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAI 75 (96)
T ss_dssp ECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEE
T ss_pred eeccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence 345566777777766689999999999998664
No 86
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=38.96 E-value=37 Score=16.75 Aligned_cols=64 Identities=14% Similarity=0.144 Sum_probs=38.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHhc---CCcccCCC------CCce--EEEEeccccchhHHHHHHHHhcCCCCeeEEEE
Q psy13020 14 ANIRFNPIITNEETLRISIEDM---GFDARLPS------TNDE--ATFTVDGMKCQSCVKKIEATIGEKPGVIAVKV 79 (81)
Q Consensus 14 ~~v~~~~~~~~~~~i~~~i~~~---g~~~~~~~------~~~~--~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~ 79 (81)
..|.+.+..++.+++.+.++.. |+...-.. .-.. ....+.. ...-...+++.+.+.++|.++.+
T Consensus 8 l~V~P~d~etDl~~L~~~vk~~~~~gl~w~~~k~~piafGlk~L~i~~vveD--~~~~td~lee~i~~~e~Vqsvdv 82 (89)
T 1gh8_A 8 IKVMPESPDVDLEALKKEIQERIPEGTELHKIDEEPIAFGLVALNVMVVVGD--AEGGTEAAEESLSGIEGVSNIEV 82 (89)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHSCTTSEECCCCEEECSSSCEEEEEEEEESS--SCGGGGHHHHHHTTSCSSEEEEE
T ss_pred EEEccCCCCCCHHHHHHHHHHhccCCcEEeeeeEEEEEcceeeEEEEEEEEc--CCcChHHHHHHHhccCCccEEEE
Confidence 4456655568999999888764 33221100 0012 2222332 33456788999999999888775
No 87
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=38.38 E-value=15 Score=18.60 Aligned_cols=32 Identities=25% Similarity=0.154 Sum_probs=24.5
Q ss_pred EecCCeEEEEEcCCCCCHHHHHHHHHhcCCcc
Q psy13020 8 SLEQKNANIRFNPIITNEETLRISIEDMGFDA 39 (81)
Q Consensus 8 ~~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~ 39 (81)
+..+++..+......++.+++.+++++.|-.+
T Consensus 45 D~eTe~lkItIEG~dIdfd~I~~~IE~~GgvI 76 (100)
T 3bpd_A 45 DQATENIKITILGNNLDYEQIKGVIEDMGGVI 76 (100)
T ss_dssp CSSEEEEEEEEEEEEECHHHHHHHHHTTTCEE
T ss_pred eccccEEEEEEEecCCCHHHHHHHHHHcCCeE
Confidence 45566667777666688999999999998664
No 88
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=38.09 E-value=24 Score=17.73 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=22.9
Q ss_pred eEEEEeccccchhH---HHHHHHHh-cCCCCeeEEEEeC
Q psy13020 47 EATFTVDGMKCQSC---VKKIEATI-GEKPGVIAVKVSH 81 (81)
Q Consensus 47 ~~~~~i~g~~c~~C---~~~i~~~l-~~~~gv~~~~~~~ 81 (81)
.+.+.+.-..|+.- ...++.+| .+++|+..+.+++
T Consensus 47 ~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l 85 (108)
T 3lno_A 47 VITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNV 85 (108)
T ss_dssp EEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEE
Confidence 44555555556542 34567778 8899998887763
No 89
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=37.74 E-value=39 Score=16.73 Aligned_cols=64 Identities=8% Similarity=-0.010 Sum_probs=37.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHhc---CCcccC-----CC-CCce--EEEEeccccchh-HHHHHHHHhcCCCCeeEEEE
Q psy13020 14 ANIRFNPIITNEETLRISIEDM---GFDARL-----PS-TNDE--ATFTVDGMKCQS-CVKKIEATIGEKPGVIAVKV 79 (81)
Q Consensus 14 ~~v~~~~~~~~~~~i~~~i~~~---g~~~~~-----~~-~~~~--~~~~i~g~~c~~-C~~~i~~~l~~~~gv~~~~~ 79 (81)
..|.+.+..++++++.+.++.. |+...- +. .-.. ....+.. ... -...+++.+.+.++|.++.+
T Consensus 10 l~V~P~d~etDl~~L~~~vk~~~~~gl~w~~~k~~pIafGlk~L~i~~vveD--~~~~~tD~lee~i~~~e~VqSvdV 85 (91)
T 2yy3_A 10 IRVMPTDPDVNLDELEEKLKKVIPEKYGLAKVEREPIAFGLVALKFYVLGRD--EEGYSFDEVAEKFEEVENVESAEV 85 (91)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHSCTTCEEEEEEEEECTTSCEEEEEEEEECS--STTCCHHHHHHHHHHSTTEEEEEE
T ss_pred EEECCCCCCCCHHHHHHHHHHhccCCcEEeeeeEEEEEcceeeEEEEEEEEC--CCccccHHHHHHHhcCCCceEEEE
Confidence 3455555568899999888764 222110 00 0012 2222322 333 47788999999999988875
No 90
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=35.01 E-value=33 Score=19.71 Aligned_cols=28 Identities=21% Similarity=0.374 Sum_probs=21.4
Q ss_pred EEeccccchhHHHHHHHHhcCCCCeeEEEEe
Q psy13020 50 FTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 50 ~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
..+.|+.|.+|.. ..+.+++||..+.+.
T Consensus 27 ~a~fagGCFWg~E---~~F~~l~GV~~t~vG 54 (203)
T 1nwa_A 27 KAILAGGCFWGLQ---DLIRNQPGVVSTRVG 54 (203)
T ss_dssp EEEEEESCHHHHH---HHHTTSTTEEEEEEE
T ss_pred eEEEecCCeeeeH---HHHhcCCCeEEEEee
Confidence 4456788998875 467889999988765
No 91
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=34.84 E-value=21 Score=18.06 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=23.2
Q ss_pred ecCCeEEEEEcCCCCCHHHHHHHHHhcCCccc
Q psy13020 9 LEQKNANIRFNPIITNEETLRISIEDMGFDAR 40 (81)
Q Consensus 9 ~~~~~~~v~~~~~~~~~~~i~~~i~~~g~~~~ 40 (81)
+..+-+.+.||..+-..+++.+.+..-||++.
T Consensus 74 lgaqvliiiydqdqnrleefsrevrrrgfevr 105 (134)
T 2l69_A 74 LGAQVLIIIYDQDQNRLEEFSREVRRRGFEVR 105 (134)
T ss_dssp HCCCCEEEEECSCHHHHHHHHHHHHHTTCCEE
T ss_pred cCCeEEEEEEeCchhHHHHHHHHHHhcCceEE
Confidence 44566777888776667777788888888863
No 92
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=33.60 E-value=43 Score=18.96 Aligned_cols=31 Identities=10% Similarity=0.085 Sum_probs=19.8
Q ss_pred EEEeccccchhHHHHHHHHhcCCCCeeEEEEe
Q psy13020 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 49 ~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
...+.|+.|-+|...+=..+.. +||..+.+.
T Consensus 20 ~~a~fagGCFWg~E~~F~~l~g-~GV~~t~~G 50 (187)
T 3pim_A 20 KLITLACGCFWGTEHMYRKYLN-DRIVDCKVG 50 (187)
T ss_dssp EEEEEESSCHHHHHHHHHHHHG-GGSSEEEEE
T ss_pred cEEEEecCCchhhHHHHHHhcC-CCeEEEEee
Confidence 3455678999998766555421 677766553
No 93
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=32.95 E-value=35 Score=19.41 Aligned_cols=27 Identities=11% Similarity=0.036 Sum_probs=20.2
Q ss_pred EeccccchhHHHHHHHHhcCCCCeeEEEEe
Q psy13020 51 TVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 51 ~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
.+.++.|.+|... .+.+++||..+.+.
T Consensus 5 a~fagGCFWg~E~---~F~~~~GV~~t~vG 31 (193)
T 3bqh_A 5 IYLAGGCFWGLEA---YFQRIDGVVDAVSG 31 (193)
T ss_dssp EEEEESCHHHHHH---HHHTSTTEEEEEEE
T ss_pred EEEecCCeeehHH---HHhcCCCEEEEEEe
Confidence 3457788888754 57789999988765
No 94
>1yj7_A ESCJ; mixed alpha/beta, extended linker, protein transport; 1.80A {Escherichia coli}
Probab=30.86 E-value=49 Score=18.28 Aligned_cols=20 Identities=40% Similarity=0.586 Sum_probs=16.7
Q ss_pred HHHHHHHhcCCCCeeEEEEe
Q psy13020 61 VKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 61 ~~~i~~~l~~~~gv~~~~~~ 80 (81)
...+++.+..++||..++|.
T Consensus 92 egELartI~~i~~V~~ARVh 111 (171)
T 1yj7_A 92 EQDIERLLSKIPGVIDCSVS 111 (171)
T ss_dssp HHHHHHHHTTSTTEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEE
Confidence 45677789999999999885
No 95
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=30.60 E-value=41 Score=19.24 Aligned_cols=29 Identities=24% Similarity=0.329 Sum_probs=21.6
Q ss_pred EEEeccccchhHHHHHHHHhcCCCCeeEEEEe
Q psy13020 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 49 ~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
...+.++.|.+|... .+.+++||..+.+.
T Consensus 44 ~~a~fagGCFWg~E~---~F~~l~GV~~t~vG 72 (199)
T 1fvg_A 44 QMAVFGMGCFWGAER---KFWTLKGVYSTQVG 72 (199)
T ss_dssp EEEEEEESSHHHHHH---HHHTSTTEEEEEEE
T ss_pred eEEEEecCCeeeeHH---HHhhCCCeEEEEee
Confidence 345567889988754 57778999988765
No 96
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=30.57 E-value=40 Score=15.99 Aligned_cols=18 Identities=17% Similarity=0.340 Sum_probs=14.5
Q ss_pred CCHHHHHHHHHhcCCccc
Q psy13020 23 TNEETLRISIEDMGFDAR 40 (81)
Q Consensus 23 ~~~~~i~~~i~~~g~~~~ 40 (81)
++++.+.+.+.+.||++.
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 567888889999999863
No 97
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=30.38 E-value=50 Score=18.19 Aligned_cols=20 Identities=20% Similarity=0.496 Sum_probs=16.1
Q ss_pred HHHHHHHhcCCCCeeEEEEe
Q psy13020 61 VKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 61 ~~~i~~~l~~~~gv~~~~~~ 80 (81)
...+++.+..++||..++|.
T Consensus 90 e~ELartI~~i~gV~~ArVh 109 (170)
T 2y9j_Y 90 EQRLEQSLQTMEGVLSARVH 109 (170)
T ss_dssp HHHHHHHHTTSTTEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEE
Confidence 34567789999999999885
No 98
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=28.64 E-value=46 Score=19.22 Aligned_cols=29 Identities=17% Similarity=0.190 Sum_probs=21.7
Q ss_pred EEEeccccchhHHHHHHHHhcCCCCeeEEEEe
Q psy13020 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 49 ~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
...+.|+.|-+|... .+.+++||..+.+.
T Consensus 43 ~~a~fagGCFWg~E~---~F~~l~GV~~t~vG 71 (211)
T 1ff3_A 43 EIAIFAMGXFWGVER---LFWQLPGVYSTAAG 71 (211)
T ss_dssp EEEEEECSSHHHHHH---HHHTSTTEEEEEEE
T ss_pred eEEEEecCCeEEehh---hHhcCCCeEEEEee
Confidence 345667889988754 57778999988765
No 99
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=26.77 E-value=51 Score=19.73 Aligned_cols=29 Identities=28% Similarity=0.385 Sum_probs=21.9
Q ss_pred EEEeccccchhHHHHHHHHhcCCCCeeEEEEe
Q psy13020 49 TFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 49 ~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
...+.|+.|-||... .+.+++||..+.+.
T Consensus 95 e~a~fAgGCFWgvE~---~F~~l~GV~~t~vG 123 (261)
T 2j89_A 95 QFAQFGAGCFWGVEL---AFQRVPGVTKTEVG 123 (261)
T ss_dssp EEEEEEESSHHHHHH---HHHTSTTEEEEEEE
T ss_pred eEEEEecCCeeeeHH---HHhhCCCeEEEEee
Confidence 445668889988754 57778999988765
No 100
>4g1a_A AQ-C16C19 peptide; helical bundles, metallopeptide complexes, polynuclear metal CD(II), SELF-assembly, metal binding protein; 1.85A {Synthetic construct}
Probab=25.83 E-value=31 Score=13.14 Aligned_cols=11 Identities=55% Similarity=1.099 Sum_probs=7.9
Q ss_pred cchhHHHHHHH
Q psy13020 56 KCQSCVKKIEA 66 (81)
Q Consensus 56 ~c~~C~~~i~~ 66 (81)
.|+.|..+|..
T Consensus 15 kcaaceqkiaa 25 (32)
T 4g1a_A 15 KCAACEQKIAA 25 (32)
T ss_dssp HTSSHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 48888887754
No 101
>1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1
Probab=22.84 E-value=75 Score=15.21 Aligned_cols=68 Identities=24% Similarity=0.297 Sum_probs=39.2
Q ss_pred eEEEEEcCCCCCHH--HHHHHHHhcCCcccCCCCCceEEEEeccccch---hHHHHHHHHhcCCCCeeEEEEe
Q psy13020 13 NANIRFNPIITNEE--TLRISIEDMGFDARLPSTNDEATFTVDGMKCQ---SCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 13 ~~~v~~~~~~~~~~--~i~~~i~~~g~~~~~~~~~~~~~~~i~g~~c~---~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
+..|.+.+...+++ .+..++...||++.-+...+.+.+.+++..-. .-...+.+.|...|-+.+.+++
T Consensus 6 ~V~V~lK~gVlDpqG~av~~al~~LG~~v~~VR~gK~~~l~~~~~~~~~a~~~v~~~~~~LLaNpVie~~~~~ 78 (85)
T 1gtd_A 6 EVRIRLKKGMLNPEAATIERALALLGYEVEDTDTTDVITFTMDEDSLEAVEREVEDMCQRLLCNPVIHDYDVS 78 (85)
T ss_dssp EEEEEECTTSCCHHHHHHHHHHHHHTCCCEEEEEEEEEEEEECCSCHHHHHHHHHHHHHHTTCCTTTEEEEEE
T ss_pred EEEEEECCCCcCcHHHHHHHHHHHcCCChheEEEEEEEEEEecCCCHHHHHHHHHHHHHHhcCCCcceEEEEE
Confidence 45566666655555 47777788999543111123445555654333 3455666667777777766553
No 102
>2yx5_A UPF0062 protein MJ1593; anti parallel beta sheet, NPPSFA, national project on protei structural and functional analyses; 2.30A {Methanocaldococcus jannaschii}
Probab=22.62 E-value=75 Score=15.11 Aligned_cols=68 Identities=15% Similarity=0.246 Sum_probs=41.2
Q ss_pred eEEEEEcCCCCCHH--HHHHHHHhcCCc-ccCCCCCceEEEEeccccch---hHHHHHHHHhcCCCCeeEEEEe
Q psy13020 13 NANIRFNPIITNEE--TLRISIEDMGFD-ARLPSTNDEATFTVDGMKCQ---SCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 13 ~~~v~~~~~~~~~~--~i~~~i~~~g~~-~~~~~~~~~~~~~i~g~~c~---~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
+..|.+.+...+++ .+..++...||. +..+.....+.+.+++..-. .-...+.+.|...|-+...+++
T Consensus 5 ~V~V~lK~gvlDpqG~av~~al~~lG~~~v~~Vr~gk~~~l~~~~~~~~~a~~~v~~~~~~LLaNpVie~y~~~ 78 (83)
T 2yx5_A 5 TVIIKLKKGVLNPEGRTIQRALNFLGFNNVKEVQTYKMIDIIMEGENEEKVKEEVEEMCKKLLANPVIHDYEIK 78 (83)
T ss_dssp EEEEEECTTCCCHHHHHHHHHHHHTTCTTCCCCCCCEEEEEEEC-CCHHHHHHHHHHHHHHTTCCTTTEEEEEE
T ss_pred EEEEEECCCCcCcHHHHHHHHHHHcCCCChhhEEEEEEEEEEecCCCHHHHHHHHHHHHHHhccCCcceEEEEE
Confidence 45566666655555 477788889994 54333345566666665433 3455666667777777766553
No 103
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=22.33 E-value=74 Score=14.96 Aligned_cols=26 Identities=19% Similarity=0.393 Sum_probs=20.5
Q ss_pred eEEEEeccccchhHHHHHHHHhcCCC
Q psy13020 47 EATFTVDGMKCQSCVKKIEATIGEKP 72 (81)
Q Consensus 47 ~~~~~i~g~~c~~C~~~i~~~l~~~~ 72 (81)
...+...|+.|+.=..++.++|.+++
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~ 35 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQ 35 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSC
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCC
Confidence 35677888889888888888888774
No 104
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=22.14 E-value=79 Score=15.18 Aligned_cols=23 Identities=22% Similarity=0.281 Sum_probs=17.2
Q ss_pred EEEeccccchhHHHHHHHHhcCC
Q psy13020 49 TFTVDGMKCQSCVKKIEATIGEK 71 (81)
Q Consensus 49 ~~~i~g~~c~~C~~~i~~~l~~~ 71 (81)
.+...|+.|+.=..+..++|.++
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l 25 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAEL 25 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTT
T ss_pred EEEcCCCCCCHHHHHHHHHHHhc
Confidence 35667888888777777888777
No 105
>1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B*
Probab=21.61 E-value=88 Score=15.54 Aligned_cols=64 Identities=11% Similarity=0.137 Sum_probs=37.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHhcCCc---ccCCC------CCc--eEEEEeccccchhHHHHHHHHhcCCCC-eeEEEE
Q psy13020 14 ANIRFNPIITNEETLRISIEDMGFD---ARLPS------TND--EATFTVDGMKCQSCVKKIEATIGEKPG-VIAVKV 79 (81)
Q Consensus 14 ~~v~~~~~~~~~~~i~~~i~~~g~~---~~~~~------~~~--~~~~~i~g~~c~~C~~~i~~~l~~~~g-v~~~~~ 79 (81)
..|.+.+..++++++.+.++..-.+ ..-.. .-. .....+.. ...-...+++.+....+ |+++.+
T Consensus 13 l~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafGlkkL~i~~vveD--d~~~tD~lee~i~~~ed~VqSvdI 88 (94)
T 1f60_B 13 LDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVED--DKVSLDDLQQSIEEDEDHVQSTDI 88 (94)
T ss_dssp EEEEESSTTSCHHHHHHHHHTCCCTTEEEEEEEEEEEETTEEEEEEEEEEET--TTCCHHHHHHHHHTCTTTEEEEEE
T ss_pred EEEccCCCCcCHHHHHHHHHHhCcCCcEEEEEEEEEEeeeeEEEEEEEEEEC--CccChHHHHHHHHhccCceeEEEE
Confidence 4455655568999999999865322 11000 001 11222222 33457788999999998 887765
No 106
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=21.28 E-value=75 Score=14.58 Aligned_cols=64 Identities=16% Similarity=0.122 Sum_probs=33.6
Q ss_pred ecCCeEEEEEcCCCCCHHHHH-HHHHhcCCcccCCCCCceEEEEeccccchhHHHHHHHHhcCCCCeeEEEEe
Q psy13020 9 LEQKNANIRFNPIITNEETLR-ISIEDMGFDARLPSTNDEATFTVDGMKCQSCVKKIEATIGEKPGVIAVKVS 80 (81)
Q Consensus 9 ~~~~~~~v~~~~~~~~~~~i~-~~i~~~g~~~~~~~~~~~~~~~i~g~~c~~C~~~i~~~l~~~~gv~~~~~~ 80 (81)
...+++.|.+.+... ...+. ..+...|-.+. ..... +.|....--. ...+.|++.|+|..++.|
T Consensus 6 ~i~~~YIV~~k~~~~-~~~~~~~~~~~~g~~i~-----~~y~~-~~Gfaa~l~~-~~~~~L~~~p~V~~Ve~D 70 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFK-SCAKKEDVISEKGGKLQ-----KCFKY-VDAASATLNE-KAVEELKKDPSVAYVEED 70 (80)
T ss_dssp --CCEEEEEECTTCC-SHHHHHHHHHTTTCEEE-----EECSS-SSEEEEECCH-HHHHHHHTCTTEEEEEEC
T ss_pred cCCCCEEEEECCCCC-hHHHHHHHHHHcCCcce-----EEEcc-cEEEEEEcCH-HHHHHHHhCCCccEEEeC
Confidence 356888999976532 33332 23333332221 11122 5555443322 334778999999988765
No 107
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=20.44 E-value=93 Score=15.34 Aligned_cols=64 Identities=11% Similarity=0.011 Sum_probs=37.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHhcCC---cccCC---C---CCce--EEEEeccccchhHHHHHHHHhcCCCC-eeEEEE
Q psy13020 14 ANIRFNPIITNEETLRISIEDMGF---DARLP---S---TNDE--ATFTVDGMKCQSCVKKIEATIGEKPG-VIAVKV 79 (81)
Q Consensus 14 ~~v~~~~~~~~~~~i~~~i~~~g~---~~~~~---~---~~~~--~~~~i~g~~c~~C~~~i~~~l~~~~g-v~~~~~ 79 (81)
..|.+.+..++++++.+.++..-. ...-. + .-.. ..+.+.. ...-...+++.+....+ |+++.+
T Consensus 10 l~VkP~d~etDl~~L~~~Vr~i~~~Gl~wg~~k~~piafGikkL~i~~vveD--d~v~tD~lee~i~~~ed~VqSvdI 85 (91)
T 1b64_A 10 LDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVED--DKVGTDMLEEQITAFEDYVQSMDV 85 (91)
T ss_dssp EEEEESSTTSCHHHHHHHHHHCCCTTCEEEEEEEEESSSSCEEEEEEEEECT--TSSCHHHHHHHHTTCTTTEEEEEE
T ss_pred EEEccCCCCcCHHHHHHHHHHhCcCCcEEEEEEEEEEEeeEEEEEEEEEEEC--CccChHHHHHHHHhccCceeEEEE
Confidence 445565556899999999986422 21100 0 0011 2222322 33457788999999998 887765
Done!