RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13021
(287 letters)
>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type
ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Length = 79
Score = 70.3 bits (172), Expect = 2e-16
Identities = 18/77 (23%), Positives = 38/77 (49%)
Query: 125 DEATFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASIS 184
++A F ++GM C +C +IE + + G+ + V + Y+ S +++ ++
Sbjct: 2 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVD 61
Query: 185 ELGFPATVIDEAGSGEG 201
+LG+ + E S EG
Sbjct: 62 KLGYKLKLKGEQDSIEG 78
Score = 68.0 bits (166), Expect = 1e-15
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 202 ELELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEK 261
+ E I GM+CA+C N+IE + K+ G+ +A V + Y+ + D+ E ++K
Sbjct: 3 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDK 62
Query: 262 LGFTTALLNSKD 273
LG+ L +D
Sbjct: 63 LGYKLKLKGEQD 74
Score = 63.4 bits (154), Expect = 7e-14
Identities = 18/74 (24%), Positives = 33/74 (44%)
Query: 54 TVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISIED 113
I+GMTC +C N I + GV N V+ + + +NP + L+ +++
Sbjct: 3 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDK 62
Query: 114 MGFDARLPSTNDEA 127
+G+ +L D
Sbjct: 63 LGYKLKLKGEQDSI 76
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 68.7 bits (168), Expect = 8e-16
Identities = 35/72 (48%), Positives = 51/72 (70%)
Query: 53 STVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISIE 112
++V IS++GMTC SCV TI I GV +IKVSLE+KNA I ++P + +TL+ +I+
Sbjct: 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 67
Query: 113 DMGFDARLPSTN 124
DMGFDA + + +
Sbjct: 68 DMGFDAVIHNPD 79
Score = 66.4 bits (162), Expect = 5e-15
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 195 EAGSGEGELELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRD 254
+ G + + + GM+C SCV IE + K+ G+ V+L + YD ++ P+
Sbjct: 2 DPSMGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKT 61
Query: 255 VMECIEKLGFTTALLNS 271
+ E I+ +GF + N
Sbjct: 62 LQEAIDDMGFDAVIHNP 78
Score = 65.6 bits (160), Expect = 1e-14
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 125 DEATFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASIS 184
+ T +V+GM C SCV IE IG+ G++ + V+L A I Y L +P + +I
Sbjct: 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAID 67
Query: 185 ELGFPATVIDE 195
++GF A + +
Sbjct: 68 DMGFDAVIHNP 78
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia
metallidurans CH34 [TaxId: 266264]}
Length = 72
Score = 68.2 bits (167), Expect = 1e-15
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 54 TVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISIED 113
TV +S+ GMTC +C T+ I GV + V+ E + A + F+ T+ + L + D
Sbjct: 4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATAD 63
Query: 114 MGFDARL 120
G+ + +
Sbjct: 64 AGYPSSV 70
Score = 65.5 bits (160), Expect = 9e-15
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 128 TFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASISELG 187
T +V GM C +C ++ I + G++ V V +A + + S ++ + ++ G
Sbjct: 6 TLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAG 65
Query: 188 FPATV 192
+P++V
Sbjct: 66 YPSSV 70
Score = 65.5 bits (160), Expect = 1e-14
Identities = 12/65 (18%), Positives = 32/65 (49%)
Query: 204 ELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEKLG 263
L + GM+C++C ++ ++ K+ G+ V T++ +D T + + + G
Sbjct: 6 TLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAG 65
Query: 264 FTTAL 268
+ +++
Sbjct: 66 YPSSV 70
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type
ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Length = 72
Score = 68.2 bits (167), Expect = 1e-15
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 198 SGEGELELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVME 257
S + E+ +++SGM+CA+C +IE +K++ G+ A V L T+ YD TG + E
Sbjct: 3 SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQE 62
Query: 258 CIEKLGFT 265
IEKLG+
Sbjct: 63 KIEKLGYH 70
Score = 62.5 bits (152), Expect = 1e-13
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 54 TVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISIED 113
+ + + GMTC +C I ++ PGV + V+L + N+ ++P T ++ IE
Sbjct: 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEK 66
Query: 114 MGFDA 118
+G+
Sbjct: 67 LGYHV 71
Score = 60.9 bits (148), Expect = 5e-13
Identities = 18/67 (26%), Positives = 25/67 (37%)
Query: 122 STNDEATFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAA 181
S E V GM C +C +IE + PG+ V L + Y I
Sbjct: 3 SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQE 62
Query: 182 SISELGF 188
I +LG+
Sbjct: 63 KIEKLGY 69
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 67.9 bits (166), Expect = 1e-15
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 126 EATFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASISE 185
E +DGM C SCV+ IE I +KPG+ S+ V+L + + Y L SP + +I +
Sbjct: 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIED 63
Query: 186 LGFPATVID 194
+GF AT+ D
Sbjct: 64 MGFDATLSD 72
Score = 67.2 bits (164), Expect = 2e-15
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 51 MASTVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRIS 110
+ +I+IDGMTC SCV +I I KPGV +I+VSL N + ++P++T+ ETLR +
Sbjct: 1 LTQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGA 60
Query: 111 IEDMGFDARL 120
IEDMGFDA L
Sbjct: 61 IEDMGFDATL 70
Score = 64.8 bits (158), Expect = 2e-14
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 202 ELELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEK 261
E + I GM+C SCV IE + K G+KS V+L G YD +T P + IE
Sbjct: 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIED 63
Query: 262 LGFTTALLN 270
+GF L +
Sbjct: 64 MGFDATLSD 72
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 68.5 bits (167), Expect = 1e-15
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 196 AGSGEGELELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDV 255
A +GE L++K+ GM+C SC + IE + KL G++ V+L Q Y + ++
Sbjct: 4 AQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEM 63
Query: 256 MECIEKLGFTTAL 268
+ IE +GF +
Sbjct: 64 KKQIEAMGFPAFV 76
Score = 63.1 bits (153), Expect = 1e-13
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 46 STSAEMASTVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEE 105
S + + + ++GMTC SC +TI I GV IKVSL+ + A I + P + + E
Sbjct: 2 SMAQAGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVE 61
Query: 106 TLRISIEDMGFDARLPS 122
++ IE MGF A +
Sbjct: 62 EMKKQIEAMGFPAFVKK 78
Score = 60.4 bits (146), Expect = 1e-12
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 128 TFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASISELG 187
V+GM C SC IE IG+ G+ + V+L +A I Y LIS E+ I +G
Sbjct: 12 KMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMG 71
Query: 188 FPATVIDEA 196
FPA V +
Sbjct: 72 FPAFVKKQP 80
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId:
1354]}
Length = 68
Score = 66.7 bits (163), Expect = 3e-15
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 204 ELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEKLG 263
E + GMSC CV +IE +V +++G+K V L ++ ++D ++ + I +LG
Sbjct: 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62
Query: 264 FTTALL 269
+ ++
Sbjct: 63 YQAEVI 68
Score = 65.2 bits (159), Expect = 1e-14
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 129 FTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASISELGF 188
F+V GM C CV +IE +G G+ V V L KA +++ + + TEI +I+ELG+
Sbjct: 4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGY 63
Query: 189 PATVI 193
A VI
Sbjct: 64 QAEVI 68
Score = 63.3 bits (154), Expect = 7e-14
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 58 SIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISIEDMGFD 117
S+ GM+C CV I + + GV +KV L+++ A ++F+ + +I ++G+
Sbjct: 5 SVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQ 64
Query: 118 ARL 120
A +
Sbjct: 65 AEV 67
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 72
Score = 65.1 bits (159), Expect = 2e-14
Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 126 EATFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASISE 185
E V GM C +C I + G+ ++L+ + ++ Y + ++ I I +
Sbjct: 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNE-VTADSIKEIIED 61
Query: 186 LGFPATVIDEA 196
GF ++ ++
Sbjct: 62 CGFDCEILRDS 72
Score = 64.8 bits (158), Expect = 2e-14
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 202 ELELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEK 261
E+ L + GM+C++C N I T ++ L G+ ++L T + YD EVT + E IE
Sbjct: 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVT-ADSIKEIIED 61
Query: 262 LGFTTALL 269
GF +L
Sbjct: 62 CGFDCEIL 69
Score = 64.4 bits (157), Expect = 2e-14
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 52 ASTVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISI 111
A V++++ GMTC +C NTI +RA GV +SL + ++ +T ++++ I
Sbjct: 1 AREVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVT-ADSIKEII 59
Query: 112 EDMGFDARL 120
ED GFD +
Sbjct: 60 EDCGFDCEI 68
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis,
CopZ [TaxId: 1423]}
Length = 69
Score = 63.7 bits (155), Expect = 5e-14
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 202 ELELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEK 261
+ L++ GMSC CV +ETSV +L G+ + V L + +D + +D+ + IE
Sbjct: 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIED 62
Query: 262 LGFTTA 267
G+ A
Sbjct: 63 QGYDVA 68
Score = 62.9 bits (153), Expect = 8e-14
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 54 TVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISIED 113
+ ++GM+CQ CV + ++ GV + V+LE ++ F+ + + + +IED
Sbjct: 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIED 62
Query: 114 MGFDA 118
G+D
Sbjct: 63 QGYDV 67
Score = 61.3 bits (149), Expect = 3e-13
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 126 EATFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASISE 185
+ T V+GM CQ CVK +E ++GE G+++V V L A K ++ + D +S +IA +I +
Sbjct: 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIED 62
Query: 186 LGFPA 190
G+
Sbjct: 63 QGYDV 67
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 73
Score = 59.4 bits (144), Expect = 2e-12
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 203 LELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEKL 262
K+SGM CA+C K+E +V++LAG+ V T++ D ++ V ++K
Sbjct: 5 YSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI--RAQVESALQKA 62
Query: 263 GFT 265
G++
Sbjct: 63 GYS 65
Score = 58.3 bits (141), Expect = 4e-12
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 128 TFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASISELG 187
++ V GM C +C +K+E + + G+N V V K + D ++ +++ + G
Sbjct: 6 SWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAG 63
Query: 188 FPATVIDEA 196
+ A
Sbjct: 64 YSLRDEQAA 72
Score = 56.0 bits (135), Expect = 3e-11
Identities = 10/68 (14%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 52 ASTVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISI 111
+ + GM C +C + + +R GV ++V + + + + ++
Sbjct: 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADN--DIRAQVESAL 59
Query: 112 EDMGFDAR 119
+ G+ R
Sbjct: 60 QKAGYSLR 67
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide
dismutase, N-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 72
Score = 50.2 bits (120), Expect = 3e-09
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 122 STND--EATFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEI 179
+TND EAT+ + M C++CV I+A + PGINS+ + + S ++P+ I
Sbjct: 1 TTNDTYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTI 56
Query: 180 AASISELGFPATV 192
++ G A +
Sbjct: 57 INTLRNCGKDAII 69
Score = 46.7 bits (111), Expect = 6e-08
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 209 GMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEKLGFTTAL 268
M C +CVN I+ +K + GI S + Q + P ++ + G +
Sbjct: 13 PMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVA---PSTIINTLRNCGKDAII 69
Score = 45.9 bits (109), Expect = 1e-07
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 61 GMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISIEDMGFDARL 120
M C++CVN I ++ PG+ ++ +EQ+ ++ + T+ ++ + G DA +
Sbjct: 13 PMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAII 69
Query: 121 PST 123
Sbjct: 70 RGA 72
>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc
6803, Scatx1 [TaxId: 1148]}
Length = 64
Score = 48.4 bits (115), Expect = 1e-08
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 203 LELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEKL 262
++L + ++C +C + +V+ + V LT+++ L + I
Sbjct: 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALG---EEQLRTAIASA 59
Query: 263 GFT 265
G
Sbjct: 60 GHE 62
Score = 46.9 bits (111), Expect = 4e-08
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 54 TVLISIDGMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISIED 113
T+ +++ + C++C +T ++ + ++V L K I EE LR +I
Sbjct: 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGEEQLRTAIAS 58
Query: 114 MGFDA 118
G +
Sbjct: 59 AGHEV 63
Score = 46.1 bits (109), Expect = 1e-07
Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Query: 128 TFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASISELG 187
TV + C++C + + + + +V V L + K I + + ++ +I+ G
Sbjct: 4 QLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA---LGEEQLRTAIASAG 60
Query: 188 FPA 190
Sbjct: 61 HEV 63
>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human
(Homo sapiens), HAH1 [TaxId: 9606]}
Length = 66
Score = 46.0 bits (109), Expect = 9e-08
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Query: 204 ELKISGMSCASCVNKIETSVKKLAGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEKLG 263
E + M+C C + + KL G+ + L ++ + ++ ++K G
Sbjct: 4 EFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHS---MDTLLATLKKTG 58
Query: 264 FTTALL 269
T + L
Sbjct: 59 KTVSYL 64
Score = 42.1 bits (99), Expect = 2e-06
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 128 TFTVDGMKCQSCVKKIEATIGEKPGINSVLVALLAAKAEIRYSKDLISPTEIAASISELG 187
F+VD M C C + + + + G + L K I S + A++ + G
Sbjct: 4 EFSVD-MTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIESE---HSMDTLLATLKKTG 58
Query: 188 FPATVI 193
+ +
Sbjct: 59 KTVSYL 64
Score = 39.8 bits (93), Expect = 2e-05
Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Query: 61 GMTCQSCVNTITDTIRAKPGVFNIKVSLEQKNANIRFNPIITNEETLRISIEDMGFDARL 120
MTC C ++ + G + L K I + +TL +++ G
Sbjct: 8 DMTCGGCAEAVSRVLNKLGG-VKYDIDLPNKKVCIESEH---SMDTLLATLKKTGKTVSY 63
>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 72
Score = 43.6 bits (103), Expect = 8e-07
Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 203 LELKISGMSCASCVNKIETSVKKL-AGIKSAVVALTTQRGKFRYDLEVTGPRDVMECIEK 261
+ + M+C+ C + + KL + ++L Q L ++E I+K
Sbjct: 6 YQFNV-VMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLP---YDFILEKIKK 61
Query: 262 LGFT 265
G
Sbjct: 62 TGKE 65
Score = 39.4 bits (92), Expect = 3e-05
Identities = 10/69 (14%), Positives = 25/69 (36%), Gaps = 5/69 (7%)
Query: 128 TFTVDGMKCQSCVKKIEATIGE-KPGINSVLVALLAAKAEIRYSKDLISPTEIAASISEL 186
F V M C C + + + +P ++ + ++L ++ + + I I +
Sbjct: 7 QFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKT 62
Query: 187 GFPATVIDE 195
G +
Sbjct: 63 GKEVRSGKQ 71
Score = 38.2 bits (89), Expect = 7e-05
Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 61 GMTCQSCVNTITDTIRA-KPGVFNIKVSLEQKNANIRFNPIITNEETLRISIEDMGFDAR 119
MTC C + + +P V I +SLE++ ++ + + I+ G + R
Sbjct: 11 VMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVR 67
>d1gq8a_ b.80.1.5 (A:) Pectin methylesterase PemA {Carrot (Daucus
carota) [TaxId: 4039]}
Length = 319
Score = 26.0 bits (57), Expect = 6.2
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 48 SAEMASTVLISIDG----MTCQSCVNTITD------TIRAKPGVFNIKVSLEQKNANIRF 97
S+ + V+++ DG T V + IR K GV+ V + +K NI F
Sbjct: 2 SSTVGPNVVVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMF 61
Query: 98 NPIITNEETLRISIEDMGFDARLPSTNDEATFTVDG 133
+ + I+ D +T + AT G
Sbjct: 62 --LGDGRTSTIITASKNVQDG--STTFNSATVAAVG 93
>d1qjva_ b.80.1.5 (A:) Pectin methylesterase PemA {Erwinia
chrysanthemi [TaxId: 556]}
Length = 342
Score = 25.5 bits (55), Expect = 9.3
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 12/89 (13%)
Query: 63 TCQSCVNTITD-----TIRAKPGVFNIKVSLEQKNANI----RFNPIIT---NEETLRIS 110
T + + I K GV+N ++++ + N ++ R +I TL+
Sbjct: 20 TIADAIASAPAGSTPFVILIKNGVYNERLTITRNNLHLKGESRNGAVIAAATAAGTLKSD 79
Query: 111 IEDMGFDARLPSTNDEATFTVDGMKCQSC 139
G T F+ + ++
Sbjct: 80 GSKWGTAGSSTITISAKDFSAQSLTIRND 108
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.131 0.356
Gapped
Lambda K H
0.267 0.0648 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,009,951
Number of extensions: 46644
Number of successful extensions: 155
Number of sequences better than 10.0: 1
Number of HSP's gapped: 146
Number of HSP's successfully gapped: 45
Length of query: 287
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 203
Effective length of database: 1,254,276
Effective search space: 254618028
Effective search space used: 254618028
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 52 (24.0 bits)