BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13022
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04656|ATP7A_HUMAN Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3
Length = 1500
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 35/58 (60%)
Query: 20 IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGKPYVPET 77
IG GV IKVSL +K A I Y+P L +PK L EAI DMGFD + D P + +T
Sbjct: 30 IGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNPDPLPVLTDT 87
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 19 MIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66
+I + GV SI+VSLA+ + Y+P L SP+ L AI DMGFD ++
Sbjct: 398 VISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 445
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 13 SSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGF 61
+S+ IG GV IKVSL ++EA I Y P L+S +E+ + I MGF
Sbjct: 186 TSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGF 234
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ SI V+L +A + YNP ++ P ++E I ++GF V +
Sbjct: 515 GIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 557
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 16 KSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVD 69
+SS+ R G+ V+LA +A I Y+P ++ P+++ I +GF+ + + D
Sbjct: 583 ESSLTKHR-GILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEASLVKKD 635
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 14 SSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAI 56
S+ S + A V SI VSL ++ A++ YN + V+P+ L +AI
Sbjct: 293 SNIESTLSALQYVSSIVVSLENRSAIVKYNASSVTPESLRKAI 335
>sp|P70705|ATP7A_RAT Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1
SV=1
Length = 1492
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 37/69 (53%)
Query: 20 IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGKPYVPETNV 79
IG GV IKVSL +K A + YNP L +PK L EAI DMGFD + + P + T
Sbjct: 30 IGKVNGVHHIKVSLEEKSATVIYNPKLQTPKTLQEAIDDMGFDALLHNANPLPVLTNTVF 89
Query: 80 NTSADGLAF 88
T LA
Sbjct: 90 LTVTAPLAL 98
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 28/44 (63%)
Query: 19 MIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFD 62
+I + GV SI VSL + I Y+P L SP+ L EAI DMGFD
Sbjct: 398 VISKKPGVKSIHVSLTNSTGTIEYDPLLTSPEPLREAIEDMGFD 441
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 13 SSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGF 61
+S+ +G GV IKVSL ++EA I Y P L++ +E+ + I +GF
Sbjct: 186 TSTIEGKVGKLQGVQRIKVSLDNQEATIVYQPHLITAEEIKKQIEAVGF 234
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGK 71
G+ S+ V+L +A + YNP ++ P+ ++E I ++GF V + G+
Sbjct: 507 GIYSVLVALMAGKAEVRYNPAVIQPRVIAELIRELGFGAVVMENAGE 553
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 26 VDSIKVSLADKEAVITYNPTLVSPKELSEAI 56
V SI VSL ++ A++ YN +LV+P+ L +AI
Sbjct: 305 VSSIVVSLENRSAIVKYNASLVTPEILRKAI 335
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 18 SMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVD 69
S + G+ V+LA +A I Y+P ++ P+++ I ++GF+ + + D
Sbjct: 576 STLTKHKGIFYCSVALATNKAHIKYDPEIIGPRDIIHTIGNLGFEASLVKKD 627
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFD 62
GV +K+S + AV+T P++VS ++ E + D+ D
Sbjct: 112 GVTGVKISPQQRSAVVTIIPSVVSANQIVELVPDLSLD 149
>sp|P49015|ATP7A_CRIGR Copper-transporting ATPase 1 (Fragment) OS=Cricetulus griseus
GN=ATP7A PE=2 SV=1
Length = 1476
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%)
Query: 20 IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGKPYVPET 77
IG G+ IKVSL +K A I Y+P L +PK L EAI DMGFD + + P + +T
Sbjct: 30 IGKENGIHHIKVSLEEKSATIIYDPKLQTPKTLQEAIDDMGFDALLHNANPLPVLTDT 87
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 19 MIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFD 62
++ + GV SI VSLA+ + Y+P L +P+ L E I DMGFD
Sbjct: 397 VVSKKPGVKSIHVSLANSFGTVEYDPLLTAPETLREVIVDMGFD 440
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 13 SSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGF 61
+S+ IG GV IKVSL ++EA I Y P L+S +E+ + I MGF
Sbjct: 186 TSTTEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEIKKQIEAMGF 234
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ S+ V+L +A + YNP ++ P ++E I ++GF V +
Sbjct: 505 GIYSVLVALMAGKAEVRYNPAVIQPPVIAEFIRELGFGATVME 547
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 18 SMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVD 69
S + G+ V+LA +A I Y+P ++ P+++ I +GF+ + + D
Sbjct: 574 STLTKHKGIFYCSVALATNKAHIKYDPEIIGPRDIIHTIGSLGFEASLVKKD 625
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 26 VDSIKVSLADKEAVITYNPTLVSPKELSEAI 56
V SI VSL ++ A++ YN + V+P+ L +AI
Sbjct: 304 VSSIAVSLENRSAIVKYNASSVTPEMLIKAI 334
>sp|Q64430|ATP7A_MOUSE Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=3
Length = 1491
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%)
Query: 20 IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGKPYVPET 77
IG GV IKVSL +K A I Y+P L +PK L EAI DMGFD + + P + T
Sbjct: 30 IGKVNGVHHIKVSLEEKSATIIYDPKLQTPKTLQEAIDDMGFDALLHNANPLPVLTNT 87
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 19 MIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFD 62
+I + GV SI VSLA+ I ++P L SP+ L EAI DMGFD
Sbjct: 398 VISKKPGVKSIHVSLANSTGTIEFDPLLTSPETLREAIEDMGFD 441
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 20 IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGF 61
+G GV IKVSL ++EA I + P L++ +E+ + I +GF
Sbjct: 193 VGKLQGVQRIKVSLDNQEATIVFQPHLITAEEIKKQIEAVGF 234
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGK 71
G+ S+ V+L +A + YNP ++ P+ ++E I ++GF V + G+
Sbjct: 506 GIYSVLVALMAGKAEVRYNPAVIQPRVIAEFIRELGFGAMVMENAGE 552
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 26 VDSIKVSLADKEAVITYNPTLVSPKELSEAI 56
V SI VSL ++ A++ YN +LV+P+ L +AI
Sbjct: 305 VSSIVVSLENRSAIVKYNASLVTPEMLRKAI 335
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 18 SMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVD 69
S + G+ V+LA +A I Y+P ++ P+++ I +GF+ + + D
Sbjct: 575 STLTKHKGIFYCSVALATNKAHIKYDPEIIGPRDIIHTIGSLGFEASLVKKD 626
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFD 62
GV +K+S + AV+T P++VS ++ E + D+ D
Sbjct: 112 GVTGVKISPQQRSAVVTIIPSVVSASQIVELVPDLSLD 149
>sp|Q9XT50|ATP7B_SHEEP Copper-transporting ATPase 2 OS=Ovis aries GN=ATP7B PE=2 SV=1
Length = 1505
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 14 SSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
SS IG GV ++VSL+++EAVITY P L+ P++L + I DMGF+ +
Sbjct: 214 SSIEGKIGKLQGVMRVRVSLSNQEAVITYQPYLIQPQDLRDHITDMGFEAVI 265
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 19 MIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
+I R GV I V LA+ AV+ Y+P+ P+EL A+ DMGF+ +
Sbjct: 421 LISQRVGVHQISVFLAEGTAVVLYDPSRTHPEELRAAVEDMGFEASI 467
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 20 IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAI 56
IG GV SI VSL + A + YNP+LVSP L AI
Sbjct: 331 IGQLPGVQSIHVSLESRTARVQYNPSLVSPGALRRAI 367
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ SIKVSL A + Y P++VS ++ I DMGF V +
Sbjct: 140 GIVSIKVSLEQSSAEVRYVPSVVSLMQICHQIEDMGFQASVAE 182
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ S+ V+L +A + YNP + P E+++ + D+GF+ V +
Sbjct: 556 GILSVLVALMAGKAEVKYNPEAIQPLEIAKLVQDLGFEAAVME 598
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 26/43 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ V+LA +A + ++P ++ P+++ + I ++GF + Q
Sbjct: 632 GITYASVALATSKAHVKFDPEIIGPRDIVKLIEEIGFRASLAQ 674
>sp|P35670|ATP7B_HUMAN Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4
Length = 1465
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 19 MIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
MI GV I VSLA+ A + YNP+++SP+EL AI DMGF+ V
Sbjct: 380 MISQLEGVQQISVSLAEGTATVLYNPSVISPEELRAAIEDMGFEASV 426
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
GV +KVSL+++EAVITY P L+ P++L + + DMGF+ +
Sbjct: 170 GVVRVKVSLSNQEAVITYQPYLIQPEDLRDHVNDMGFEAAI 210
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 20 IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAI 56
IG GV SI+VSL +K A + Y+P+ SP L AI
Sbjct: 279 IGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAI 315
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
GV S+ V+L +A I Y+P ++ P E+++ I D+GF+ V +
Sbjct: 515 GVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME 557
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ S+KVSL A + Y P++V +++ I DMGF+ + +
Sbjct: 85 GIISMKVSLEQGSATVKYVPSVVCLQQVCHQIGDMGFEASIAE 127
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 11/43 (25%), Positives = 27/43 (62%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ V+LA +A++ ++P ++ P+++ + I ++GF + Q
Sbjct: 591 GITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLAQ 633
>sp|Q64446|ATP7B_MOUSE Copper-transporting ATPase 2 OS=Mus musculus GN=Atp7b PE=1 SV=2
Length = 1462
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
GV IKVSL+++EAVITY P L+ P++L + I DMGF+ +
Sbjct: 180 GVVRIKVSLSNQEAVITYQPYLIQPEDLRDHICDMGFEAAI 220
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 19 MIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
M+ R GV +SLA+ + Y+P++VS EL A+ DMGF+ V
Sbjct: 382 MLSQRKGVQQTSISLAEGTGAVLYDPSIVSLDELRTAVEDMGFEVSV 428
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 3 YEVFLPL-LDKSSSKSSM------IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEA 55
Y LPL +D KS + IG GV +I VSL +K A I Y+P+ V+P L A
Sbjct: 265 YLATLPLRIDGMHCKSCVLNIEGNIGQLPGVQNIHVSLENKTAQIQYDPSCVTPMFLQTA 324
Query: 56 I 56
I
Sbjct: 325 I 325
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 20 IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFD 62
I + G+ +IKVSL A + Y P++++ +++ I DMGF+
Sbjct: 90 ISSLKGIVNIKVSLEQGSATVRYVPSVMNLQQICLQIEDMGFE 132
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 23 RTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ S+ V+L +A + Y+P ++ +++ I D+GF+ V +
Sbjct: 515 HAGILSVLVALMSGKAEVKYDPEIIQSPRIAQLIQDLGFEASVME 559
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ V+LA +A + ++P +V P+++ + I ++GF + Q
Sbjct: 593 GITYASVALATSKAHVKFDPEIVGPRDIIKIIEEIGFHASLAQ 635
>sp|Q64535|ATP7B_RAT Copper-transporting ATPase 2 OS=Rattus norvegicus GN=Atp7b PE=2
SV=1
Length = 1451
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 14 SSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
SS I GV +KVSL+++EAVITY P L+ P++L + I DMGF+ +
Sbjct: 158 SSIEGKIRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLRDHICDMGFEAAI 209
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 19 MIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
M+ GV I +SLA+ + Y+P++VS EL A+ DMGF+ V
Sbjct: 376 MLSQMKGVQQIDISLAEGTGAVLYDPSVVSSDELRTAVEDMGFEVSV 422
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 20 IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFD 62
I + G+ SIKVSL A + Y P++++ +++ I DMGF+
Sbjct: 79 ISSLKGIVSIKVSLEQGSATVKYVPSVLNLQQICLQIEDMGFE 121
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Query: 7 LPL-LDKSSSKSSM------IGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAI 56
LPL +D KS + IG GV +I VSL +K A + Y+ + ++P L AI
Sbjct: 258 LPLRIDGMHCKSCVLNIEGNIGQLPGVQNIHVSLENKTAQVQYDSSCITPLFLQTAI 314
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/45 (24%), Positives = 26/45 (57%)
Query: 23 RTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ S+ V+L +A + Y+P ++ +++ I D+GF+ + +
Sbjct: 506 HAGILSVLVALMSGKAEVKYDPEVIQSPRIAQLIEDLGFEAAIME 550
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
G+ V+LA +A + ++P ++ P+++ + I ++GF +
Sbjct: 584 GITYASVALATSKAHVKFDPEIIGPRDIIKVIEEIGFHASLAH 626
>sp|O59666|ATU2_SCHPO Copper-transporting ATPase ccc2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ccc2 PE=3 SV=1
Length = 904
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 14 SSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
+S SM+ G++ +SL + A+ ++P+++SP +++E I D GFD V
Sbjct: 18 ASIQSMLEGVEGIEQFTISLLLERAIAVHDPSIISPDQIAEKIEDCGFDASV 69
>sp|P38995|ATU2_YEAST Copper-transporting ATPase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CCC2 PE=1 SV=1
Length = 1004
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
GV+S+ VSL +E + Y P+ + + E I D GFD+ +
Sbjct: 107 GVESVVVSLVTEECHVIYEPSKTTLETAREMIEDCGFDSNI 147
>sp|Q4L971|COPZ_STAHJ Copper chaperone CopZ OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=copZ PE=3 SV=2
Length = 68
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 18 SMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTK 64
S + GV S +V L + + Y+ VS +++ EAI D G+D K
Sbjct: 22 SALAKLNGVTSAEVDLDKNQVRVDYDENRVSVEQMKEAIEDQGYDVK 68
>sp|Q9SH30|HMA5_ARATH Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana
GN=HMA5 PE=2 SV=2
Length = 995
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 13 SSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFD 62
SS+ ++ + GV V+LA +EA I Y+P L S L E I + GF+
Sbjct: 144 SSTIERVLQSVNGVQRAHVALAIEEAEIHYDPRLSSYDRLLEEIENAGFE 193
>sp|P04129|MERP_SHIFL Mercuric transport protein periplasmic component OS=Shigella
flexneri GN=merP PE=1 SV=1
Length = 91
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
GV + V +EAV+T++ T S ++L++A D G+ + V Q
Sbjct: 49 GVSKVDVGFEKREAVVTFDDTKASVQKLTKATADAGYPSSVKQ 91
>sp|Q8CN01|COPZ_STAES Copper chaperone CopZ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=copZ PE=3 SV=1
Length = 68
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 18 SMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTK 64
S + GV S +V+L + + YN + V+ + + EAI + G+D K
Sbjct: 22 SALAKLNGVSSAEVNLDENHVRVEYNDSKVTFENMKEAIEEQGYDVK 68
>sp|Q5HL55|COPZ_STAEQ Copper chaperone CopZ OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=copZ PE=3 SV=1
Length = 68
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 18 SMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTK 64
S + GV S +V+L + + YN + V+ + + EAI + G+D K
Sbjct: 22 SALAKLNGVSSAEVNLDENHVRVEYNDSKVTFENMKEAIEEQGYDVK 68
>sp|Q9S7J8|HMA7_ARATH Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1
PE=1 SV=1
Length = 1001
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65
GV V+L A + ++P LV +++ EAI D GF+ ++
Sbjct: 83 GVFKASVALLQNRADVVFDPNLVKEEDIKEAIEDAGFEAEI 123
>sp|Q4A0G1|COPA_STAS1 Copper-exporting P-type ATPase A OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=copA PE=3 SV=1
Length = 794
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTK 64
GVD V+L + A I+YNP+ S L + I +G+D +
Sbjct: 99 GVDQATVNLTTENATISYNPSATSVDALIKKIQKIGYDAQ 138
>sp|C6DQZ2|MAK_MYCTK Maltokinase OS=Mycobacterium tuberculosis (strain KZN 1435 / MDR)
GN=mak PE=3 SV=1
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVIT-YNPT----LVSPKELSEAIY 57
Y + PL+D+++ K AR V+ + + D AV + +P L+ EL +A+Y
Sbjct: 370 YAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVY 429
Query: 58 DMGFDTK 64
+ G++T+
Sbjct: 430 ETGYETR 436
>sp|A5WII2|MAK_MYCTF Maltokinase OS=Mycobacterium tuberculosis (strain F11) GN=mak PE=3
SV=1
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVIT-YNPT----LVSPKELSEAIY 57
Y + PL+D+++ K AR V+ + + D AV + +P L+ EL +A+Y
Sbjct: 370 YAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVY 429
Query: 58 DMGFDTK 64
+ G++T+
Sbjct: 430 ETGYETR 436
>sp|A5TYK2|MAK_MYCTA Maltokinase OS=Mycobacterium tuberculosis (strain ATCC 25177 /
H37Ra) GN=mak PE=3 SV=1
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVIT-YNPT----LVSPKELSEAIY 57
Y + PL+D+++ K AR V+ + + D AV + +P L+ EL +A+Y
Sbjct: 370 YAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVY 429
Query: 58 DMGFDTK 64
+ G++T+
Sbjct: 430 ETGYETR 436
>sp|C1AJF3|MAK_MYCBT Maltokinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC
35737 / TMC 1019) GN=mak PE=3 SV=1
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVIT-YNPT----LVSPKELSEAIY 57
Y + PL+D+++ K AR V+ + + D AV + +P L+ EL +A+Y
Sbjct: 370 YAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVY 429
Query: 58 DMGFDTK 64
+ G++T+
Sbjct: 430 ETGYETR 436
>sp|A1KEU8|MAK_MYCBP Maltokinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2)
GN=mak PE=3 SV=1
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVIT-YNPT----LVSPKELSEAIY 57
Y + PL+D+++ K AR V+ + + D AV + +P L+ EL +A+Y
Sbjct: 370 YAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVY 429
Query: 58 DMGFDTK 64
+ G++T+
Sbjct: 430 ETGYETR 436
>sp|Q7U2S7|MAK_MYCBO Maltokinase OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=mak PE=1 SV=1
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVIT-YNPT----LVSPKELSEAIY 57
Y + PL+D+++ K AR V+ + + D AV + +P L+ EL +A+Y
Sbjct: 370 YAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVY 429
Query: 58 DMGFDTK 64
+ G++T+
Sbjct: 430 ETGYETR 436
>sp|Q7DAF6|MAK2_MYCTU Maltokinase OS=Mycobacterium tuberculosis GN=mak PE=3 SV=1
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVIT-YNPT----LVSPKELSEAIY 57
Y + PL+D+++ K AR V+ + + D AV + +P L+ EL +A+Y
Sbjct: 370 YAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVY 429
Query: 58 DMGFDTK 64
+ G++T+
Sbjct: 430 ETGYETR 436
>sp|O07177|MAK1_MYCTU Maltokinase OS=Mycobacterium tuberculosis GN=mak PE=3 SV=2
Length = 455
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVIT-YNPT----LVSPKELSEAIY 57
Y + PL+D+++ K AR V+ + + D AV + +P L+ EL +A+Y
Sbjct: 370 YAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVY 429
Query: 58 DMGFDTK 64
+ G++T+
Sbjct: 430 ETGYETR 436
>sp|Q4L481|GRAR_STAHJ Response regulator protein GraR OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=graR PE=3 SV=1
Length = 224
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 7 LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66
+ +L+ K + I R D++ +L D EA ++ N V+ L + + D+G DT++
Sbjct: 157 MIILEMLIQKQNQIVTR---DTLITALWDDEAFVSDNTLTVNVNRLRKKLSDIGMDTQIE 213
Query: 67 QVDGKPYVPE 76
GK Y+
Sbjct: 214 TKVGKGYMAH 223
>sp|P94186|MERP_ALCSP Mercuric transport protein periplasmic component OS=Alcaligenes
sp. GN=merP PE=3 SV=1
Length = 91
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
GV I V+ +EAV+T++ S ++L++A D G+ + V Q
Sbjct: 49 GVSKIDVTFETREAVVTFDDAKTSVQKLTKATGDAGYPSSVKQ 91
>sp|A9BJB9|MUTL_PETMO DNA mismatch repair protein MutL OS=Petrotoga mobilis (strain DSM
10674 / SJ95) GN=mutL PE=3 SV=1
Length = 621
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 29 IKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGKPYVPETNVNTSADGLAF 88
IK+ +KE ++ P+LV + I+++ D +++ D +P + + N+ T A A
Sbjct: 516 IKLEEDEKEIIVKGLPSLVKIDDAERLIFEIADDLRISNFDQQPNILDKNLATMACRAAV 575
Query: 89 K 89
K
Sbjct: 576 K 576
>sp|P04131|MERP_PSEAI Mercuric transport protein periplasmic component OS=Pseudomonas
aeruginosa GN=merP PE=4 SV=1
Length = 91
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 25 GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67
GV + V+ ++AV+T++ S ++L++A D G+ + V Q
Sbjct: 49 GVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVKQ 91
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,039,119
Number of Sequences: 539616
Number of extensions: 1077274
Number of successful extensions: 2526
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2445
Number of HSP's gapped (non-prelim): 96
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)