Query psy13022
Match_columns 93
No_of_seqs 170 out of 1275
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 17:22:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13022.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13022hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a4j_A Pacszia, cation-transpo 99.5 6.5E-14 2.2E-18 78.6 9.1 62 3-65 6-68 (69)
2 3dxs_X Copper-transporting ATP 99.5 3.1E-14 1.1E-18 81.0 7.7 65 3-67 6-71 (74)
3 3iwl_A Copper transport protei 99.5 5.8E-14 2E-18 79.3 7.7 62 3-68 6-67 (68)
4 1cc8_A Protein (metallochapero 99.5 3.4E-13 1.1E-17 76.7 8.5 61 3-66 9-70 (73)
5 1osd_A MERP, hypothetical prot 99.4 8.4E-13 2.9E-17 73.5 8.7 63 3-65 7-70 (72)
6 3cjk_B Copper-transporting ATP 99.4 1.3E-12 4.5E-17 73.6 8.6 62 6-67 10-71 (75)
7 2xmw_A PACS-N, cation-transpor 99.4 1.2E-12 4.1E-17 72.6 8.2 63 3-66 7-70 (71)
8 2crl_A Copper chaperone for su 99.4 1.5E-12 5E-17 78.9 9.1 66 3-71 23-88 (98)
9 2l3m_A Copper-ION-binding prot 99.4 1.4E-12 4.8E-17 72.6 8.3 61 3-63 9-70 (71)
10 1cpz_A Protein (COPZ); copper 99.4 1.9E-12 6.4E-17 71.2 8.4 63 3-65 4-67 (68)
11 2qif_A Copper chaperone COPZ; 99.4 2.4E-12 8.3E-17 70.3 8.6 61 3-63 6-67 (69)
12 3fry_A Probable copper-exporti 99.4 6.3E-13 2.2E-17 75.8 6.4 60 3-67 9-69 (73)
13 2g9o_A Copper-transporting ATP 99.4 1.7E-12 5.7E-17 77.0 7.9 69 6-74 11-82 (90)
14 1kvi_A Copper-transporting ATP 99.4 1.4E-12 4.9E-17 74.3 7.1 66 3-68 12-78 (79)
15 2kt2_A Mercuric reductase; nme 99.4 2.6E-12 9E-17 71.2 8.0 63 3-66 4-67 (69)
16 1yg0_A COP associated protein; 99.4 2.1E-12 7.2E-17 70.6 7.4 60 3-63 5-65 (66)
17 1aw0_A Menkes copper-transport 99.4 2.5E-12 8.4E-17 71.6 7.2 63 3-65 7-70 (72)
18 2ldi_A Zinc-transporting ATPas 99.4 2.7E-12 9.4E-17 70.7 7.3 62 3-64 7-69 (71)
19 1q8l_A Copper-transporting ATP 99.4 2.7E-12 9.2E-17 74.6 7.5 65 3-67 13-78 (84)
20 1mwy_A ZNTA; open-faced beta-s 99.4 5.4E-12 1.9E-16 70.9 8.3 62 3-66 7-69 (73)
21 1fvq_A Copper-transporting ATP 99.4 3.7E-12 1.3E-16 70.8 7.3 63 3-66 6-69 (72)
22 1p6t_A Potential copper-transp 99.3 3.3E-12 1.1E-16 80.9 7.5 67 6-72 82-148 (151)
23 1opz_A Potential copper-transp 99.3 5.8E-12 2E-16 70.5 7.7 63 3-65 10-73 (76)
24 2ofg_X Zinc-transporting ATPas 99.3 8.9E-12 3.1E-16 76.6 9.0 63 3-65 12-75 (111)
25 1jww_A Potential copper-transp 99.3 4.8E-12 1.6E-16 71.8 7.1 65 3-67 7-72 (80)
26 2roe_A Heavy metal binding pro 99.3 7.3E-12 2.5E-16 69.2 7.5 61 3-66 4-65 (66)
27 1yjr_A Copper-transporting ATP 99.3 5.6E-12 1.9E-16 70.6 6.9 64 3-66 8-72 (75)
28 1y3j_A Copper-transporting ATP 99.3 3.5E-12 1.2E-16 72.4 5.9 62 6-67 11-72 (77)
29 2ew9_A Copper-transporting ATP 99.3 7.3E-12 2.5E-16 78.9 7.1 60 6-65 88-147 (149)
30 2kkh_A Putative heavy metal tr 99.3 2.6E-11 8.8E-16 72.0 8.6 69 3-71 20-89 (95)
31 2xmm_A SSR2857 protein, ATX1; 99.2 3.6E-11 1.2E-15 65.2 6.7 58 3-63 5-63 (64)
32 2rop_A Copper-transporting ATP 99.2 4.9E-11 1.7E-15 79.5 8.6 61 7-67 131-191 (202)
33 2kyz_A Heavy metal binding pro 99.2 2.4E-11 8.1E-16 67.4 5.6 59 3-66 5-64 (67)
34 1qup_A Superoxide dismutase 1 99.2 1.2E-10 4E-15 80.2 9.3 66 3-71 10-75 (222)
35 2k2p_A Uncharacterized protein 99.2 3.8E-11 1.3E-15 70.8 6.0 58 3-63 26-84 (85)
36 1jk9_B CCS, copper chaperone f 99.1 3.3E-10 1.1E-14 79.2 7.7 65 3-70 11-75 (249)
37 2ew9_A Copper-transporting ATP 99.0 7.3E-10 2.5E-14 69.6 7.3 64 3-66 8-72 (149)
38 2aj0_A Probable cadmium-transp 99.0 6.4E-10 2.2E-14 62.0 5.3 57 3-66 7-64 (71)
39 3j09_A COPA, copper-exporting 99.0 1.9E-09 6.5E-14 84.3 8.2 64 3-66 6-70 (723)
40 2rop_A Copper-transporting ATP 98.9 4.9E-09 1.7E-13 69.8 7.1 61 3-63 24-88 (202)
41 1p6t_A Potential copper-transp 98.9 7.4E-09 2.5E-13 65.3 7.0 61 3-63 10-71 (151)
42 4gwb_A Peptide methionine sulf 96.2 0.013 4.6E-07 38.6 6.1 49 10-58 9-72 (168)
43 1fvg_A Peptide methionine sulf 95.8 0.02 6.7E-07 38.7 5.6 49 10-58 50-117 (199)
44 1nwa_A Peptide methionine sulf 95.6 0.03 1E-06 37.9 5.8 48 10-57 32-94 (203)
45 3bqh_A PILB, peptide methionin 95.5 0.027 9.2E-07 37.9 5.3 48 10-57 9-75 (193)
46 1ff3_A Peptide methionine sulf 95.5 0.028 9.5E-07 38.3 5.4 49 10-58 49-116 (211)
47 2j89_A Methionine sulfoxide re 95.5 0.032 1.1E-06 39.1 5.6 48 10-57 101-167 (261)
48 3e0m_A Peptide methionine sulf 94.6 0.068 2.3E-06 38.4 5.5 49 10-58 9-74 (313)
49 2raq_A Conserved protein MTH88 93.2 0.48 1.6E-05 28.4 6.5 52 15-66 23-79 (97)
50 3pim_A Peptide methionine sulf 93.2 0.073 2.5E-06 35.6 3.2 49 10-58 26-101 (187)
51 2x3d_A SSO6206; unknown functi 92.6 0.49 1.7E-05 28.3 5.9 52 15-66 22-78 (96)
52 3bpd_A Uncharacterized protein 91.5 0.36 1.2E-05 29.1 4.4 52 15-66 23-79 (100)
53 3cq1_A Putative uncharacterize 90.3 0.33 1.1E-05 28.8 3.6 33 3-35 45-83 (103)
54 3lvj_C Sulfurtransferase TUSA; 90.3 1.5 5.2E-05 24.8 6.9 54 7-70 18-71 (82)
55 1uwd_A Hypothetical protein TM 88.5 0.52 1.8E-05 27.9 3.5 33 3-35 46-84 (103)
56 1jdq_A TM006 protein, hypothet 88.1 2.7 9.3E-05 24.8 6.7 52 7-68 34-85 (98)
57 3lno_A Putative uncharacterize 84.9 0.85 2.9E-05 27.3 3.1 34 3-36 48-88 (108)
58 2nyt_A Probable C->U-editing e 84.7 2 6.7E-05 28.5 5.1 55 7-67 92-146 (190)
59 1je3_A EC005, hypothetical 8.6 84.0 2.2 7.4E-05 25.2 4.6 53 7-69 35-87 (97)
60 1pav_A Hypothetical protein TA 82.7 1.5 5.2E-05 24.4 3.4 52 7-68 14-65 (78)
61 3hz7_A Uncharacterized protein 79.7 2.5 8.5E-05 24.3 3.7 53 7-68 9-61 (87)
62 3v4k_A DNA DC->DU-editing enzy 57.9 5.7 0.00019 26.7 2.1 55 6-67 108-162 (203)
63 3vow_A Probable DNA DC->DU-edi 53.3 7.7 0.00026 25.8 2.1 56 6-67 94-149 (190)
64 2fi0_A Conserved domain protei 42.6 20 0.00068 20.0 2.5 19 46-64 60-78 (81)
65 3cnq_P Subtilisin BPN'; unclea 41.8 20 0.00067 19.5 2.4 27 1-32 44-70 (80)
66 2phc_B Uncharacterized protein 38.6 83 0.0028 21.1 5.5 44 13-58 27-72 (225)
67 2jsx_A Protein NAPD; TAT, proo 38.2 58 0.002 18.8 6.0 48 9-58 15-62 (95)
68 2ko1_A CTR148A, GTP pyrophosph 37.4 48 0.0016 17.6 3.7 27 5-31 51-77 (88)
69 2kwa_A Kinase A inhibitor; bac 36.5 34 0.0012 19.7 3.0 43 14-58 34-88 (101)
70 4e0h_A Mitochondrial FAD-linke 36.2 21 0.00072 21.0 2.0 21 4-24 42-62 (106)
71 3oep_A Putative uncharacterize 35.0 76 0.0026 23.9 5.3 46 12-59 20-67 (494)
72 1yj7_A ESCJ; mixed alpha/beta, 33.7 33 0.0011 22.1 2.8 22 13-34 92-113 (171)
73 2f40_A Hypothetical protein PF 33.4 24 0.00081 20.7 1.8 43 12-54 22-64 (96)
74 2y9j_Y Lipoprotein PRGK, prote 33.3 34 0.0012 22.0 2.8 21 13-33 90-110 (170)
75 2w7v_A General secretion pathw 31.5 79 0.0027 18.4 4.7 55 15-70 16-73 (95)
76 2z30_B TK-subtilisin; thermoco 31.3 37 0.0013 17.9 2.4 26 2-32 34-59 (65)
77 4dx5_A Acriflavine resistance 30.3 94 0.0032 25.1 5.4 45 14-58 160-209 (1057)
78 3pro_C Alpha-lytic protease; P 28.9 50 0.0017 21.2 3.0 37 23-61 113-149 (166)
79 2v50_A Multidrug resistance pr 28.8 1E+02 0.0036 24.9 5.4 46 14-59 160-210 (1052)
80 3ouv_A Serine/threonine protei 26.9 75 0.0026 16.6 3.4 37 46-82 15-51 (71)
81 2f06_A Conserved hypothetical 26.6 1.1E+02 0.0036 18.2 6.0 53 10-64 83-136 (144)
82 1vq2_A DCMP deaminase, deoxycy 26.3 52 0.0018 21.2 2.8 47 6-67 129-175 (193)
83 1vq3_A Phosphoribosylformylgly 24.3 1.1E+02 0.0038 17.7 4.2 26 37-62 19-46 (94)
84 3gwl_A P14, FAD-linked sulfhyd 24.2 26 0.00089 20.7 0.9 20 5-24 43-62 (106)
85 3u5s_A FAD-linked sulfhydryl o 23.8 32 0.0011 21.0 1.3 22 3-24 57-78 (126)
86 3fpn_B Geobacillus stearotherm 22.4 79 0.0027 18.4 2.9 31 34-65 11-41 (106)
87 1th5_A NIFU1; iron-sulfur clus 22.1 66 0.0022 17.8 2.3 23 8-30 45-71 (74)
88 3gwn_A Probable FAD-linked sul 21.3 32 0.0011 20.6 0.9 20 5-24 45-64 (114)
89 4ee6_A Prenyltransferase; PT f 20.9 2.3E+02 0.0079 20.1 5.5 41 22-62 156-205 (304)
90 4gud_A Imidazole glycerol phos 20.2 1.5E+02 0.0053 18.5 4.2 28 37-66 5-32 (211)
91 2l69_A Rossmann 2X3 fold prote 20.2 76 0.0026 18.9 2.4 35 33-67 74-108 (134)
No 1
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.54 E-value=6.5e-14 Score=78.58 Aligned_cols=62 Identities=26% Similarity=0.391 Sum_probs=57.1
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~ 65 (93)
|.|. |.|.+|+..|+++|++++||..+++|+.++++.|.| +...+++.|.++|++.||++.+
T Consensus 6 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~-~~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 6 LQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY-HGETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE-CTTCCHHHHHHHHHHTTCEEEE
T ss_pred EEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE-CCCCCHHHHHHHHHHcCCceEe
Confidence 4554 999999999999999999999999999999999999 5668999999999999999865
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.54 E-value=3.1e-14 Score=81.04 Aligned_cols=65 Identities=25% Similarity=0.359 Sum_probs=60.0
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
|.| .|.|.+|+..|+++|++++||..+++|+.++++.|.|++...+++.|.++|+++||++.+..
T Consensus 6 ~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 6 VGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred EEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence 445 49999999999999999999999999999999999999887899999999999999987764
No 3
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.52 E-value=5.8e-14 Score=79.33 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=57.1
Q ss_pred ceecCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecC
Q psy13022 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQV 68 (93)
Q Consensus 3 ~~v~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~ 68 (93)
|.|.|.|.+|+.+|+++|++++|| .+++|+.++++.|.++ .+++.|.++|+++||++.+.++
T Consensus 6 ~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 6 FSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE---HSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp EEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES---SCHHHHHHHHHTTCSCEEEEEC
T ss_pred EEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec---CCHHHHHHHHHHcCCceEecCC
Confidence 677899999999999999999999 9999999999999973 6899999999999999987654
No 4
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.47 E-value=3.4e-13 Score=76.70 Aligned_cols=61 Identities=15% Similarity=0.176 Sum_probs=56.4
Q ss_pred ceecCCChhhHHHHHHhhhcCC-CceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEVFLPLLDKSSSKSSMIGART-GVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v~m~c~~C~~~Iek~L~~l~-GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.|.|+|.+|+.+|+++|++++ ||..+++|+.++++.|.++ .+++.|.++|+++||++...
T Consensus 9 ~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~---~~~~~i~~~i~~~Gy~~~~~ 70 (73)
T 1cc8_A 9 FNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT---LPYDFILEKIKKTGKEVRSG 70 (73)
T ss_dssp EEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES---SCHHHHHHHHHTTSSCEEEE
T ss_pred EEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCCceee
Confidence 7788999999999999999999 9999999999999999973 68899999999999997654
No 5
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.45 E-value=8.4e-13 Score=73.53 Aligned_cols=63 Identities=22% Similarity=0.357 Sum_probs=57.6
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~ 65 (93)
|.|. |.|.+|+..|++.|.+++||..+++++..+.+.|.|++...+.+.|.+.|+++||.+.+
T Consensus 7 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 7 LSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred EEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 4454 99999999999999999999999999999999999998778899999999999998754
No 6
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.43 E-value=1.3e-12 Score=73.63 Aligned_cols=62 Identities=42% Similarity=0.577 Sum_probs=57.6
Q ss_pred cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 6 FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 6 ~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
.|.|.+|+..|++.|.+++||..+.+++..+.+.|.|++.....+.|.+.|+++||.+.+..
T Consensus 10 gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 10 GMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp CCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred CccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 49999999999999999999999999999999999999877889999999999999976654
No 7
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.42 E-value=1.2e-12 Score=72.56 Aligned_cols=63 Identities=25% Similarity=0.397 Sum_probs=55.1
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.|. |.|++|+..|++.|.+++||..+.+++.++.+.|.|++. .+.+.|.+.|+++||.+.+.
T Consensus 7 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 7 LQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE-TTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp EEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----CHHHHHHHHHHHTCEEEEE
T ss_pred EEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCHHHHHHHHHHcCCCceeC
Confidence 4555 999999999999999999999999999999999999976 78999999999999987543
No 8
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.5e-12 Score=78.92 Aligned_cols=66 Identities=12% Similarity=0.231 Sum_probs=59.4
Q ss_pred ceecCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecCCCC
Q psy13022 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGK 71 (93)
Q Consensus 3 ~~v~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~~~~ 71 (93)
|.|.|.|.+|+.+|+++|.+++||..+++|+.++++.|.++ .+++.|.++|+++||.+.+......
T Consensus 23 l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~---~~~~~i~~~i~~~Gy~~~~~~~~~~ 88 (98)
T 2crl_A 23 FAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT---LPSQEVQALLEGTGRQAVLKGMGSG 88 (98)
T ss_dssp EEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES---SCHHHHHHHHHTTTSCEEEEESCCC
T ss_pred EEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe---CCHHHHHHHHHHhCCceEEccCCCC
Confidence 77889999999999999999999999999999999999984 5789999999999999877655443
No 9
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.42 E-value=1.4e-12 Score=72.58 Aligned_cols=61 Identities=25% Similarity=0.372 Sum_probs=56.4
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCce
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDT 63 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~ 63 (93)
|.|. |.|++|+..|++.|.+++||..+.+++..+.+.|.|++...+++.|.+.|+++||.+
T Consensus 9 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 9 LQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred EEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4554 999999999999999999999999999999999999987788999999999999974
No 10
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.41 E-value=1.9e-12 Score=71.21 Aligned_cols=63 Identities=24% Similarity=0.468 Sum_probs=57.4
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~ 65 (93)
|.|. |.|.+|+..|++.|.+++||..+++++..+.+.+.|++...+.+.|.+.|++.||++..
T Consensus 4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 4443 99999999999999999999999999999999999998778899999999999998754
No 11
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.41 E-value=2.4e-12 Score=70.27 Aligned_cols=61 Identities=23% Similarity=0.416 Sum_probs=56.4
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCce
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDT 63 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~ 63 (93)
|.|. |.|++|+..|++.|..++||..+.+++..+.+.|.|++...+++.|.+.|+++||.+
T Consensus 6 ~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 6 LQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred EEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 4555 999999999999999999999999999999999999987788999999999999975
No 12
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.41 E-value=6.3e-13 Score=75.83 Aligned_cols=60 Identities=15% Similarity=0.174 Sum_probs=55.2
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
|.|. |.|.+|+.+|+++|++ +||..+.+|+.++++.|.|+ +++.|.++|+++||.+.+..
T Consensus 9 ~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~----~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 9 LELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE----DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp EEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG----GHHHHHHHHHHTTCEEEECC
T ss_pred EEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC----CHHHHHHHHHHcCCceEecC
Confidence 4554 9999999999999999 99999999999999999987 78999999999999987765
No 13
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.39 E-value=1.7e-12 Score=76.98 Aligned_cols=69 Identities=26% Similarity=0.247 Sum_probs=58.7
Q ss_pred cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhC---CCceeeecCCCCCcc
Q psy13022 6 FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDM---GFDTKVTQVDGKPYV 74 (93)
Q Consensus 6 ~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~---Gy~~~~~~~~~~~~~ 74 (93)
-|.|.+|+..|+++|.+++||..+++++.++++.|.|++...+++.|.++|+++ ||++.+.......-.
T Consensus 11 Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~~~~~~ 82 (90)
T 2g9o_A 11 GMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEVEIEGR 82 (90)
T ss_dssp SCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC-----
T ss_pred CcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCCccccc
Confidence 499999999999999999999999999999999999998778889999999999 598877666544433
No 14
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.39 E-value=1.4e-12 Score=74.30 Aligned_cols=66 Identities=41% Similarity=0.548 Sum_probs=59.2
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecC
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQV 68 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~ 68 (93)
|.| .|.|.+|+..|+++|.+++||..+++++.++.+.|.|++.....+.|.++|+++||.+.+...
T Consensus 12 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 78 (79)
T 1kvi_A 12 ISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP 78 (79)
T ss_dssp EEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECCC
T ss_pred EEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecCC
Confidence 344 499999999999999999999999999999999999998777889999999999999866543
No 15
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.39 E-value=2.6e-12 Score=71.17 Aligned_cols=63 Identities=19% Similarity=0.289 Sum_probs=57.1
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.| .|.|++|+..|+++|.+++||..+++++..+.+.+.|++. ...+.|.+.|+++||.+.+.
T Consensus 4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 4 LKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG-TSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp EEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT-SCHHHHHHHHHTTTSEEECC
T ss_pred EEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC-CCHHHHHHHHHHCCCceEeC
Confidence 455 4999999999999999999999999999999999999976 68899999999999987543
No 16
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.38 E-value=2.1e-12 Score=70.62 Aligned_cols=60 Identities=22% Similarity=0.380 Sum_probs=54.9
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCce
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDT 63 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~ 63 (93)
|.|. |.|++|+..|+++|.+++||..+++++.++++.+.|++. .+.+.|.+.|+++||.+
T Consensus 5 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 5 FQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAP-ATQDLIKEALLDAGQEV 65 (66)
T ss_dssp ECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTT-CCHHHHHHHHHHHTCCC
T ss_pred EEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCC-CCHHHHHHHHHHcCCCc
Confidence 4554 999999999999999999999999999999999999876 48899999999999975
No 17
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.37 E-value=2.5e-12 Score=71.60 Aligned_cols=63 Identities=37% Similarity=0.574 Sum_probs=57.6
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceee
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~ 65 (93)
|.| .|.|.+|+..|+++|.+++||..+.+++..+.+.|.|++.....+.|.+.|+++||.+.+
T Consensus 7 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1aw0_A 7 INIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL 70 (72)
T ss_dssp EEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred EEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence 455 499999999999999999999999999999999999998767899999999999998654
No 18
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.37 E-value=2.7e-12 Score=70.68 Aligned_cols=62 Identities=24% Similarity=0.319 Sum_probs=56.5
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCcee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTK 64 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~ 64 (93)
|.|. |.|.+|+..|++.|.+++||..+.+++.++.+.+.|++...+.+.|.+.|+++||.+.
T Consensus 7 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 7 MQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 4444 9999999999999999999999999999999999999877788999999999999864
No 19
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.37 E-value=2.7e-12 Score=74.58 Aligned_cols=65 Identities=37% Similarity=0.514 Sum_probs=58.8
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
|.| .|.|.+|+..|++.|.+++||..+++++..+.+.|.|++.....+.|.+.|+++||.+.+..
T Consensus 13 ~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 78 (84)
T 1q8l_A 13 MKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp EEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSC
T ss_pred EEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecC
Confidence 444 49999999999999999999999999999999999999877889999999999999976554
No 20
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.36 E-value=5.4e-12 Score=70.94 Aligned_cols=62 Identities=13% Similarity=0.251 Sum_probs=55.5
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.|. |.|++|+..|++.|.+++||..+++++.++.+.|.|++. ..+.|.+.|+++||.+...
T Consensus 7 ~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~--~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 7 WKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADND--IRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp EEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSC--CHHHHHHHHHHHTCEEEEC
T ss_pred EEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC--CHHHHHHHHHHcCCccccc
Confidence 4555 999999999999999999999999999999999999974 4788999999999987654
No 21
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.35 E-value=3.7e-12 Score=70.85 Aligned_cols=63 Identities=25% Similarity=0.413 Sum_probs=57.6
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.|. |.|++|+..|++.|.+++||..+++++.++.+.+.|+ ...+.+.|.+.|++.||.+.+.
T Consensus 6 ~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~~~~~~i~~~i~~~G~~~~~~ 69 (72)
T 1fvq_A 6 LAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NEVTADSIKEIIEDCGFDCEIL 69 (72)
T ss_dssp EEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TTSCHHHHHHHHHHHTCCEEEE
T ss_pred EEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CCCCHHHHHHHHHHCCCceEEc
Confidence 4554 9999999999999999999999999999999999998 6678999999999999998665
No 22
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.34 E-value=3.3e-12 Score=80.90 Aligned_cols=67 Identities=19% Similarity=0.269 Sum_probs=61.1
Q ss_pred cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecCCCCC
Q psy13022 6 FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGKP 72 (93)
Q Consensus 6 ~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~~~~~ 72 (93)
.|.|++|++.|+++|.+++||..+.+|+.++++.|.|++...+++.|.++|+++||.+.......+.
T Consensus 82 gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~~ 148 (151)
T 1p6t_A 82 GMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQDSI 148 (151)
T ss_dssp SCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSSSSC
T ss_pred CCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCccccc
Confidence 4999999999999999999999999999999999999988889999999999999998776554443
No 23
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.34 E-value=5.8e-12 Score=70.47 Aligned_cols=63 Identities=17% Similarity=0.308 Sum_probs=57.3
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~ 65 (93)
|.|. |.|.+|+..|++.|.+++||..+.+++..+.+.|.|++...+.+.|.+.|+++||.+..
T Consensus 10 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 10 MQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVI 73 (76)
T ss_dssp EEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEC
T ss_pred EEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceec
Confidence 4454 99999999999999999999999999999999999998778899999999999998654
No 24
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.34 E-value=8.9e-12 Score=76.63 Aligned_cols=63 Identities=21% Similarity=0.269 Sum_probs=58.1
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~ 65 (93)
|.|. |.|++|+..|+++|++++||..+++++.++++.|.|++...+.+.|.+.|+++||.+..
T Consensus 12 l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (111)
T 2ofg_X 12 MQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE 75 (111)
T ss_dssp EEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC
T ss_pred EEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee
Confidence 5565 99999999999999999999999999999999999998777889999999999998754
No 25
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.33 E-value=4.8e-12 Score=71.84 Aligned_cols=65 Identities=20% Similarity=0.357 Sum_probs=58.7
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
|.|. |.|.+|+..|++.|.+++||..+.+++.++.+.+.|++...+.+.|.+.|+++||.+....
T Consensus 7 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~ 72 (80)
T 1jww_A 7 FDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG 72 (80)
T ss_dssp EEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred EEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence 4454 9999999999999999999999999999999999999877889999999999999876644
No 26
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.33 E-value=7.3e-12 Score=69.25 Aligned_cols=61 Identities=23% Similarity=0.358 Sum_probs=54.7
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.|. |.|.+|+..|+++|.+++||..+++++.++.+.| + ...+++.|.+.|+++||.+..+
T Consensus 4 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~-~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 4 LKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E-GTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp EEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C-SCCCHHHHHHHHHTTTCEEEEC
T ss_pred EEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C-CCCCHHHHHHHHHHcCCCcEec
Confidence 5665 9999999999999999999999999999999999 3 4478999999999999987653
No 27
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.32 E-value=5.6e-12 Score=70.61 Aligned_cols=64 Identities=22% Similarity=0.395 Sum_probs=57.3
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.| .|.|.+|+..|++.|.+++||..+.+++..+.+.+.|++....++.|.+.|+++||.+...
T Consensus 8 ~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (75)
T 1yjr_A 8 LVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV 72 (75)
T ss_dssp EEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred EEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence 344 4899999999999999999999999999999999999987677889999999999987543
No 28
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.32 E-value=3.5e-12 Score=72.43 Aligned_cols=62 Identities=24% Similarity=0.402 Sum_probs=57.2
Q ss_pred cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 6 FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 6 ~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
.|.|++|+..|+++|.+++||..+++++.++.+.|.|++...+.+.|.+.|+++||.+....
T Consensus 11 gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 11 GMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp CGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred CeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 48999999999999999999999999999999999999877788999999999999976654
No 29
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.30 E-value=7.3e-12 Score=78.88 Aligned_cols=60 Identities=18% Similarity=0.434 Sum_probs=56.5
Q ss_pred cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceee
Q psy13022 6 FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65 (93)
Q Consensus 6 ~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~ 65 (93)
.|.|++|++.|+++|++++||..+++|+.++++.|.|++...+++.|.++|+++||.+.+
T Consensus 88 gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 88 GMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL 147 (149)
T ss_dssp SCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred eccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence 599999999999999999999999999999999999998878999999999999998754
No 30
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.28 E-value=2.6e-11 Score=72.04 Aligned_cols=69 Identities=13% Similarity=0.276 Sum_probs=60.8
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecCCCC
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGK 71 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~~~~ 71 (93)
|.| .|.|++|+..|++.|..++||..+.+++..+.+.|.|++..+..+.|...|+.+||.+........
T Consensus 20 ~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~~~ 89 (95)
T 2kkh_A 20 FDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNGET 89 (95)
T ss_dssp EEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCCCC
T ss_pred EEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCCCc
Confidence 455 399999999999999999999999999999999999998767889999999999999876655443
No 31
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.23 E-value=3.6e-11 Score=65.21 Aligned_cols=58 Identities=17% Similarity=0.274 Sum_probs=52.3
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCce
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDT 63 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~ 63 (93)
|.|. |.|.+|+..|++.|.+++||..+++++.++++.+.. ..+.+.|.++|+++||.+
T Consensus 5 ~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~---~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 5 LTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITS---ALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp EECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEEC---SSCHHHHHHHHHHTTCCC
T ss_pred EEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEe---cCCHHHHHHHHHHcCCCC
Confidence 5563 999999999999999999999999999999999983 367899999999999975
No 32
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.23 E-value=4.9e-11 Score=79.55 Aligned_cols=61 Identities=41% Similarity=0.617 Sum_probs=57.0
Q ss_pred CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 7 LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 7 m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
|.|.+|+..|+++|.+++||..+.+++..+.+.|.|++....++.|.++|+++||.+....
T Consensus 131 m~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 191 (202)
T 2rop_A 131 MTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVS 191 (202)
T ss_dssp CCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC-
T ss_pred ccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcC
Confidence 9999999999999999999999999999999999999877899999999999999986654
No 33
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.22 E-value=2.4e-11 Score=67.42 Aligned_cols=59 Identities=14% Similarity=0.168 Sum_probs=52.5
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.| .|.|++|+..|+++|.++ ||..+.+++.++.+.+.+++. +.|.++|+++||++...
T Consensus 5 ~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~----~~i~~~i~~~Gy~~~~~ 64 (67)
T 2kyz_A 5 LYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL----DSVLKKLEEIDYPVESY 64 (67)
T ss_dssp EECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH----HHHHHHHHTTTCCCCBC
T ss_pred EEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH----HHHHHHHHHcCCceeeE
Confidence 455 599999999999999999 999999999999999998753 88999999999987543
No 34
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.19 E-value=1.2e-10 Score=80.20 Aligned_cols=66 Identities=11% Similarity=0.239 Sum_probs=59.0
Q ss_pred ceecCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecCCCC
Q psy13022 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDGK 71 (93)
Q Consensus 3 ~~v~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~~~~ 71 (93)
|.|.|.|.+|+.+|+++|++++||..+++++.++++.|.+. .++++|.++|+++||++.+......
T Consensus 10 l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~---~~~~~I~~aI~~~Gy~a~~~~~~~~ 75 (222)
T 1qup_A 10 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS---VAPSTIINTLRNCGKDAIIRGAGKP 75 (222)
T ss_dssp EECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES---SCHHHHHHHHHHTTCCCEEECCSCT
T ss_pred EEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc---CCHHHHHHHHHHcCCccccccCCCc
Confidence 67889999999999999999999999999999999999853 6889999999999999877655443
No 35
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.19 E-value=3.8e-11 Score=70.78 Aligned_cols=58 Identities=12% Similarity=0.131 Sum_probs=52.7
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCce
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDT 63 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~ 63 (93)
|.|. |.|.+|+..|+++|++++||..+++++.++.+.|.++ .+++.|.++|+++||.+
T Consensus 26 l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~---~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 26 FHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV---SDAAHIAEIITAAGYTP 84 (85)
T ss_dssp EECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC---CCHHHHHHHHHHTTCCC
T ss_pred EEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec---CCHHHHHHHHHHcCCCC
Confidence 4554 9999999999999999999999999999999999863 68899999999999975
No 36
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.09 E-value=3.3e-10 Score=79.22 Aligned_cols=65 Identities=11% Similarity=0.230 Sum_probs=58.0
Q ss_pred ceecCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecCCC
Q psy13022 3 YEVFLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDG 70 (93)
Q Consensus 3 ~~v~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~~~ 70 (93)
|.|.|+|.+|+.+|+++|++++||..+++++.++++.|.. ..++++|.++|+++||.+.+.....
T Consensus 11 l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~---~~~~~~I~~aIe~~Gy~a~~~~~~~ 75 (249)
T 1jk9_B 11 YAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVES---SVAPSTIINTLRNCGKDAIIRGAGK 75 (249)
T ss_dssp EECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEE---SSCHHHHHHHHHTTTCCCEEEEESS
T ss_pred EEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEec---CCCHHHHHHHHHHhCCCcccccCCc
Confidence 6788999999999999999999999999999999999984 3688999999999999987655433
No 37
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.04 E-value=7.3e-10 Score=69.56 Aligned_cols=64 Identities=27% Similarity=0.434 Sum_probs=57.8
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.| .|.|.+|+..|++.|.+++||..+.+++.++++.+.|++...+++.|.+.|++.||.+...
T Consensus 8 ~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (149)
T 2ew9_A 8 LQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVM 72 (149)
T ss_dssp EEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred EEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEee
Confidence 344 5999999999999999999999999999999999999887778899999999999987654
No 38
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.01 E-value=6.4e-10 Score=62.04 Aligned_cols=57 Identities=16% Similarity=0.155 Sum_probs=49.1
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.|. |.|.+|+..|+++|.+++||..+++++..+.+.|.++. . .+.|+++||.....
T Consensus 7 ~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~---~----~~~i~~~Gy~~~~~ 64 (71)
T 2aj0_A 7 YRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEA---S----IQQVEQAGAFEHLK 64 (71)
T ss_dssp EEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESC---C----HHHHHHHHTTTTCE
T ss_pred EEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecC---c----HHHHHHhCCCcccc
Confidence 5566 99999999999999999999999999999999999875 2 45788899976543
No 39
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.96 E-value=1.9e-09 Score=84.33 Aligned_cols=64 Identities=20% Similarity=0.326 Sum_probs=58.7
Q ss_pred cee-cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 3 YEV-FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 3 ~~v-~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
|.| .|+|.+|+..||+.|++++||.++++|+.++++.|.|++...++++|.++|++.||++...
T Consensus 6 l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~ 70 (723)
T 3j09_A 6 VRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE 70 (723)
T ss_dssp EEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred EEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence 344 3999999999999999999999999999999999999988889999999999999997544
No 40
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.89 E-value=4.9e-09 Score=69.77 Aligned_cols=61 Identities=31% Similarity=0.414 Sum_probs=55.0
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCC---Cce
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMG---FDT 63 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~G---y~~ 63 (93)
|.|. |.|.+|+..|+++|.+++||..+.+++..+++.|.|++....++.|.+.|+++| |.+
T Consensus 24 l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v 88 (202)
T 2rop_A 24 LRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKV 88 (202)
T ss_dssp EEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEE
T ss_pred EEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEE
Confidence 4454 999999999999999999999999999999999999987788999999999983 655
No 41
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.87 E-value=7.4e-09 Score=65.25 Aligned_cols=61 Identities=18% Similarity=0.310 Sum_probs=55.0
Q ss_pred ceec-CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCce
Q psy13022 3 YEVF-LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDT 63 (93)
Q Consensus 3 ~~v~-m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~ 63 (93)
|.|. |.|++|+..+++.|.+++||..+.+++..+.+.+.|++.......|.+.+++.||.+
T Consensus 10 ~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 10 MQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred EEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 3343 999999999999999999999999999999999999876678899999999999965
No 42
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=96.23 E-value=0.013 Score=38.55 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=43.0
Q ss_pred hhhHHHHHHhhhcCCCceEEEEecCCc---------------EEEEEECCCCCCHHHHHHHHHh
Q psy13022 10 LDKSSSKSSMIGARTGVDSIKVSLADK---------------EAVITYNPTLVSPKELSEAIYD 58 (93)
Q Consensus 10 ~~C~~~Iek~L~~l~GV~~v~v~l~~~---------------~v~V~~d~~~~~~~~I~~~I~~ 58 (93)
.+|-+-+|..+.+++||.++.+-+..+ .+.|.|||..++.++|++..=+
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~~ 72 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFFQ 72 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHHh
Confidence 469999999999999999999998865 6789999999999999986533
No 43
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=95.84 E-value=0.02 Score=38.72 Aligned_cols=49 Identities=18% Similarity=0.225 Sum_probs=43.1
Q ss_pred hhhHHHHHHhhhcCCCceEEEEecCCcE-------------------EEEEECCCCCCHHHHHHHHHh
Q psy13022 10 LDKSSSKSSMIGARTGVDSIKVSLADKE-------------------AVITYNPTLVSPKELSEAIYD 58 (93)
Q Consensus 10 ~~C~~~Iek~L~~l~GV~~v~v~l~~~~-------------------v~V~~d~~~~~~~~I~~~I~~ 58 (93)
.+|-+-+|..+.+++||.++.+-+..+. +.|.|||..++.++|++..=+
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~~ 117 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWE 117 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHHH
Confidence 4699999999999999999999888764 789999999999999987644
No 44
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=95.63 E-value=0.03 Score=37.93 Aligned_cols=48 Identities=21% Similarity=0.268 Sum_probs=42.0
Q ss_pred hhhHHHHHHhhhcCCCceEEEEecCCc---------------EEEEEECCCCCCHHHHHHHHH
Q psy13022 10 LDKSSSKSSMIGARTGVDSIKVSLADK---------------EAVITYNPTLVSPKELSEAIY 57 (93)
Q Consensus 10 ~~C~~~Iek~L~~l~GV~~v~v~l~~~---------------~v~V~~d~~~~~~~~I~~~I~ 57 (93)
.+|-+-+|..+.+++||.++.+-+..+ .|.|.|||..++.++|++..=
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff 94 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFF 94 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 469999999999999999999988765 467899999999999998653
No 45
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=95.53 E-value=0.027 Score=37.88 Aligned_cols=48 Identities=13% Similarity=0.110 Sum_probs=42.0
Q ss_pred hhhHHHHHHhhhcCCCceEEEEecCCcE-------------------EEEEECCCCCCHHHHHHHHH
Q psy13022 10 LDKSSSKSSMIGARTGVDSIKVSLADKE-------------------AVITYNPTLVSPKELSEAIY 57 (93)
Q Consensus 10 ~~C~~~Iek~L~~l~GV~~v~v~l~~~~-------------------v~V~~d~~~~~~~~I~~~I~ 57 (93)
.+|-+-+|..+.+++||.++.+-+..+. |.|.|||..++.++|++..=
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~ 75 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFF 75 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4689999999999999999999887763 78999999999999988653
No 46
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=95.51 E-value=0.028 Score=38.31 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=42.7
Q ss_pred hhhHHHHHHhhhcCCCceEEEEecCCc-------------------EEEEEECCCCCCHHHHHHHHHh
Q psy13022 10 LDKSSSKSSMIGARTGVDSIKVSLADK-------------------EAVITYNPTLVSPKELSEAIYD 58 (93)
Q Consensus 10 ~~C~~~Iek~L~~l~GV~~v~v~l~~~-------------------~v~V~~d~~~~~~~~I~~~I~~ 58 (93)
.+|-+-+|..+.+++||.++.+-+..+ .+.|.|||..++.++|++..=+
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~ 116 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE 116 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 469999999999999999999998844 4789999999999999987644
No 47
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=95.45 E-value=0.032 Score=39.10 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=42.5
Q ss_pred hhhHHHHHHhhhcCCCceEEEEecCCcE-------------------EEEEECCCCCCHHHHHHHHH
Q psy13022 10 LDKSSSKSSMIGARTGVDSIKVSLADKE-------------------AVITYNPTLVSPKELSEAIY 57 (93)
Q Consensus 10 ~~C~~~Iek~L~~l~GV~~v~v~l~~~~-------------------v~V~~d~~~~~~~~I~~~I~ 57 (93)
.+|-+-+|..+.+++||.++.+-+..+. |.|.|||..++.++|++..=
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4799999999999999999999887764 78999999999999988653
No 48
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=94.65 E-value=0.068 Score=38.38 Aligned_cols=49 Identities=16% Similarity=0.119 Sum_probs=42.6
Q ss_pred hhhHHHHHHhhhcCCCceEEEEecCCcE-----------------EEEEECCCCCCHHHHHHHHHh
Q psy13022 10 LDKSSSKSSMIGARTGVDSIKVSLADKE-----------------AVITYNPTLVSPKELSEAIYD 58 (93)
Q Consensus 10 ~~C~~~Iek~L~~l~GV~~v~v~l~~~~-----------------v~V~~d~~~~~~~~I~~~I~~ 58 (93)
.+|-+-+|..+.+++||.++.+-++.+. |.|.|||..++.++|++..=+
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~~ 74 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYFR 74 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHHh
Confidence 4688999999999999999999988664 789999999999999886533
No 49
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=93.22 E-value=0.48 Score=28.42 Aligned_cols=52 Identities=13% Similarity=0.199 Sum_probs=42.8
Q ss_pred HHHHhhhcCCCceEEE-----EecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 15 SKSSMIGARTGVDSIK-----VSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 15 ~Iek~L~~l~GV~~v~-----v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
.+.+.|.+++||..++ ++..+..+.|+.....++.++|.++|++.|-.++.+
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSI 79 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV 79 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 4667889999988877 456777888888877899999999999999877654
No 50
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=93.15 E-value=0.073 Score=35.59 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=41.8
Q ss_pred hhhHHHHHHhhhcC--CCceEEEEecCCc-------------------------EEEEEECCCCCCHHHHHHHHHh
Q psy13022 10 LDKSSSKSSMIGAR--TGVDSIKVSLADK-------------------------EAVITYNPTLVSPKELSEAIYD 58 (93)
Q Consensus 10 ~~C~~~Iek~L~~l--~GV~~v~v~l~~~-------------------------~v~V~~d~~~~~~~~I~~~I~~ 58 (93)
.+|-+-+|..+.++ +||.++.+-+..+ .+.|.|||..++.++|++..=+
T Consensus 26 gGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp~~isy~~LL~~Ff~ 101 (187)
T 3pim_A 26 CGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNPKVITLRELTDFFFR 101 (187)
T ss_dssp SSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECTTTSCHHHHHHHHTT
T ss_pred cCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECCccCCHHHHHHHHHH
Confidence 46899999999999 9999999887766 1789999999999999987643
No 51
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=92.61 E-value=0.49 Score=28.32 Aligned_cols=52 Identities=12% Similarity=0.211 Sum_probs=42.0
Q ss_pred HHHHhhhcCCCceEEEE-----ecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 15 SKSSMIGARTGVDSIKV-----SLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 15 ~Iek~L~~l~GV~~v~v-----~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
.+.+.|.+++||..+++ +..+..+.++.....++.++|.++|++.|-.++..
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI 78 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI 78 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 46788999999988875 45666777777767799999999999999876654
No 52
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=91.47 E-value=0.36 Score=29.09 Aligned_cols=52 Identities=17% Similarity=0.142 Sum_probs=41.4
Q ss_pred HHHHhhhcCCCceEEEE-----ecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 15 SKSSMIGARTGVDSIKV-----SLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 15 ~Iek~L~~l~GV~~v~v-----~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
.+.+.|.+++||..+++ +..+..+.|+.....++.++|.++|++.|-.+..+
T Consensus 23 dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSI 79 (100)
T 3bpd_A 23 VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSV 79 (100)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence 46788999999988875 45666777777666689999999999999876544
No 53
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=90.31 E-value=0.33 Score=28.78 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=26.2
Q ss_pred ceecCCChhh------HHHHHHhhhcCCCceEEEEecCC
Q psy13022 3 YEVFLPLLDK------SSSKSSMIGARTGVDSIKVSLAD 35 (93)
Q Consensus 3 ~~v~m~c~~C------~~~Iek~L~~l~GV~~v~v~l~~ 35 (93)
+.+.+++++| ...++.+|.+++||..++|++..
T Consensus 45 v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 45 VRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp EEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 5677788888 46789999999999999887543
No 54
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=90.29 E-value=1.5 Score=24.83 Aligned_cols=54 Identities=9% Similarity=0.102 Sum_probs=40.1
Q ss_pred CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecCCC
Q psy13022 7 LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVDG 70 (93)
Q Consensus 7 m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~~~ 70 (93)
+.||.-...+.++|.+++ ..+.+.|..+.. ...+.|...++..||.........
T Consensus 18 l~CP~Pvl~~kkal~~l~---------~G~~l~V~~dd~-~a~~di~~~~~~~G~~~~~~~~~~ 71 (82)
T 3lvj_C 18 LRCPEPVMMVRKTVRNMQ---------PGETLLIIADDP-ATTRDIPGFCTFMEHELVAKETDG 71 (82)
T ss_dssp CCTTHHHHHHHHHHHTSC---------TTCEEEEEECCT-THHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCCHHHHHHHHHHHhCC---------CCCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEEecC
Confidence 679999999999999874 223455555543 577899999999999987664433
No 55
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=88.48 E-value=0.52 Score=27.85 Aligned_cols=33 Identities=18% Similarity=0.103 Sum_probs=25.6
Q ss_pred ceecCCChhh------HHHHHHhhhcCCCceEEEEecCC
Q psy13022 3 YEVFLPLLDK------SSSKSSMIGARTGVDSIKVSLAD 35 (93)
Q Consensus 3 ~~v~m~c~~C------~~~Iek~L~~l~GV~~v~v~l~~ 35 (93)
+.+.++.++| ...++++|.+++||..++|++..
T Consensus 46 v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~~ 84 (103)
T 1uwd_A 46 VLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTF 84 (103)
T ss_dssp EEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEECC
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEec
Confidence 5667777777 35689999999999998887543
No 56
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=88.09 E-value=2.7 Score=24.77 Aligned_cols=52 Identities=6% Similarity=0.014 Sum_probs=39.7
Q ss_pred CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecC
Q psy13022 7 LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQV 68 (93)
Q Consensus 7 m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~ 68 (93)
+.||.-...+.++|.+++ ..+.+.|..+.. .....|...+++.||.+.....
T Consensus 34 l~CP~Pvl~tkkaL~~l~---------~Ge~L~Vl~dd~-~a~~dI~~~~~~~G~~v~~~e~ 85 (98)
T 1jdq_A 34 EVCPVPDVETKRALQNMK---------PGEILEVWIDYP-MSKERIPETVKKLGHEVLEIEE 85 (98)
T ss_dssp CCSSHHHHHHHHHHHTCC---------TTCEEEEEESSC-THHHHHHHHHHHSSCCEEEEEE
T ss_pred CCCCHHHHHHHHHHHhCC---------CCCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEEE
Confidence 578888999999999875 233456666643 5789999999999999876553
No 57
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=84.88 E-value=0.85 Score=27.28 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=26.1
Q ss_pred ceecCCChhh------HHHHHHhh-hcCCCceEEEEecCCc
Q psy13022 3 YEVFLPLLDK------SSSKSSMI-GARTGVDSIKVSLADK 36 (93)
Q Consensus 3 ~~v~m~c~~C------~~~Iek~L-~~l~GV~~v~v~l~~~ 36 (93)
+.+.++.++| ...++.+| .+++||.+++|++...
T Consensus 48 V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~ 88 (108)
T 3lno_A 48 ITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVVWN 88 (108)
T ss_dssp EEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEECCS
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEEec
Confidence 5567778888 45688899 8999999888776443
No 58
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=84.73 E-value=2 Score=28.52 Aligned_cols=55 Identities=4% Similarity=-0.006 Sum_probs=37.2
Q ss_pred CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 7 LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 7 m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
-||+.|+..|-.+|++.+||..+-+-.. .|.........-.+.++++|-++..+.
T Consensus 92 ePC~~Ca~aIi~al~~~~gI~rVV~~~~------d~~~~~p~~~~g~~~L~~aGI~V~~~~ 146 (190)
T 2nyt_A 92 SPCAACADRIIKTLSKTKNLRLLILVGR------LFMWEEPEIQAALKKLKEAGCKLRIMK 146 (190)
T ss_pred ChHHHHHHHHHHhhhhcCCccEEEEEee------cCCcCChHHHHHHHHHHHCCCEEEEec
Confidence 4899999999999999999987665311 111000123456778899998877543
No 59
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=83.98 E-value=2.2 Score=25.22 Aligned_cols=53 Identities=9% Similarity=0.006 Sum_probs=38.6
Q ss_pred CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecCC
Q psy13022 7 LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQVD 69 (93)
Q Consensus 7 m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~~ 69 (93)
+.||.-...+.++|.+++ ..+.+.|..+.. ...+.|...+++.||.......+
T Consensus 35 l~CP~PvlktkkaL~~l~---------~Ge~L~Vl~dd~-~a~~dIp~~~~~~G~~v~~~e~~ 87 (97)
T 1je3_A 35 EPCPYPAVATLEAMPQLK---------KGEILEVVSDCP-QSINNIPLDARNHGYTVLDIQQD 87 (97)
T ss_dssp CSSSSSTHHHHHHTTTCC---------SSCEEEEEEBCS-SSSCHHHHHHHHHTCSEEEEEEC
T ss_pred CCCCHHHHHHHHHHHcCC---------CCCEEEEEECCc-chHHHHHHHHHHCCCEEEEEEee
Confidence 578888889999998875 233455555543 56788999999999998764433
No 60
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=82.72 E-value=1.5 Score=24.41 Aligned_cols=52 Identities=6% Similarity=-0.192 Sum_probs=37.9
Q ss_pred CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecC
Q psy13022 7 LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQV 68 (93)
Q Consensus 7 m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~ 68 (93)
+.||.-...+.++|.+++. .+.+.|..+.. .....|...+++.||.......
T Consensus 14 l~CP~Pvl~~k~al~~l~~---------G~~L~V~~dd~-~a~~di~~~~~~~G~~~~~~~~ 65 (78)
T 1pav_A 14 SYCPGPLMELIKAYKQAKV---------GEVISVYSTDA-GTKKDAPAWIQKSGQELVGVFD 65 (78)
T ss_dssp CSSCTTHHHHHHHHTTSCT---------TCCEECCBSSS-CHHHHHHHHHHHHTEEECCCCC
T ss_pred CCCCHHHHHHHHHHHcCCC---------CCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEEE
Confidence 5788889999999998742 23345555533 5678999999999998765433
No 61
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=79.72 E-value=2.5 Score=24.34 Aligned_cols=53 Identities=9% Similarity=0.069 Sum_probs=38.7
Q ss_pred CCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeecC
Q psy13022 7 LPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQV 68 (93)
Q Consensus 7 m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~~ 68 (93)
+.||.-...+.++|.+++. ..+.+.|..+.. .+.+.|...++..||.+.....
T Consensus 9 l~CP~Pvl~~kkal~~l~~--------~G~~L~V~~dd~-~a~~dI~~~~~~~G~~v~~~~~ 61 (87)
T 3hz7_A 9 QVCPIPVIRAKKALAELGE--------AGGVVTVLVDND-ISRQNLQKMAEGMGYQSEYLEK 61 (87)
T ss_dssp CCTTHHHHHHHHHHHTTGG--------GCCEEEEEESSH-HHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHhccC--------CCCEEEEEECCc-cHHHHHHHHHHHCCCEEEEEEe
Confidence 6799999999999998730 123445555533 5778899999999999866543
No 62
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=57.86 E-value=5.7 Score=26.72 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=33.9
Q ss_pred cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 6 FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 6 ~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
.-||+.|+..|..-|.+.+.|. ..+-..+ +-+- . ..-.+=...+.++|-.+.++.
T Consensus 108 WSPC~~CA~~v~~FL~~~~~v~---L~If~aR--LY~~-~-~~~~~gLr~L~~aG~~v~iM~ 162 (203)
T 3v4k_A 108 WSPCFSCAQEMAKFISKNKHVS---LCIKTAR--IYDD-Q-GRCQEGLRTLAEAGAKISIMT 162 (203)
T ss_pred CCChHHHHHHHHHHHhhCCCeE---EEEEEEe--eccc-C-chHHHHHHHHHHCCCeEEecC
Confidence 4689999999999999888753 2222222 2222 1 233444556667787766543
No 63
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=53.31 E-value=7.7 Score=25.80 Aligned_cols=56 Identities=13% Similarity=0.219 Sum_probs=32.4
Q ss_pred cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 6 FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 6 ~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
--||+.|+..|-.-|.+.+.|. ..+- .+.+ |.-......+=+..+.++|-.+..+.
T Consensus 94 wSPC~~CA~~va~FL~~~~~v~---L~If--~aRL-Y~~~~~~~q~gLr~L~~~G~~v~iM~ 149 (190)
T 3vow_A 94 WSPCPDCAGEVAEFLARHSNVN---LTIF--TARL-YYFQYPCYQEGLRSLSQEGVAVEIMD 149 (190)
T ss_dssp ECCCHHHHHHHHHHHHHCTTEE---EEEE--EEEC-TTTTSHHHHHHHHHHHHHTCEEEECC
T ss_pred CCchHHHHHHHHHHHHhCCCeE---EEEE--EEec-ccccCchHHHHHHHHHHCCCcEEEeC
Confidence 4699999999999999888753 1111 1111 21111122334556667787766543
No 64
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=42.59 E-value=20 Score=20.01 Aligned_cols=19 Identities=5% Similarity=0.142 Sum_probs=16.8
Q ss_pred CCCHHHHHHHHHhCCCcee
Q psy13022 46 LVSPKELSEAIYDMGFDTK 64 (93)
Q Consensus 46 ~~~~~~I~~~I~~~Gy~~~ 64 (93)
.++++.+.+.+.+.||.+.
T Consensus 60 gid~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 60 GTPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp TCCHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHcCCEee
Confidence 3789999999999999875
No 65
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=41.78 E-value=20 Score=19.52 Aligned_cols=27 Identities=7% Similarity=-0.071 Sum_probs=19.5
Q ss_pred CCceecCCChhhHHHHHHhhhcCCCceEEEEe
Q psy13022 1 MGYEVFLPLLDKSSSKSSMIGARTGVDSIKVS 32 (93)
Q Consensus 1 ~~~~v~m~c~~C~~~Iek~L~~l~GV~~v~v~ 32 (93)
.||.+.++.. .-+.|++.|+|..|+-|
T Consensus 44 ~Gfaa~l~~~-----~~~~L~~~p~V~~Ve~D 70 (80)
T 3cnq_P 44 DAASATLNEK-----AVEELKKDPSVAYVEED 70 (80)
T ss_dssp SEEEEECCHH-----HHHHHHTCTTEEEEEEC
T ss_pred EEEEEEcCHH-----HHHHHHhCCCccEEEeC
Confidence 3788888752 34678889999877744
No 66
>2phc_B Uncharacterized protein PH0987; structural genomics, southeas collaboratory for structural genomics, secsg, PSI, protein initiative; 2.29A {Pyrococcus horikoshii} SCOP: b.62.1.4 d.74.5.1
Probab=38.59 E-value=83 Score=21.07 Aligned_cols=44 Identities=16% Similarity=0.126 Sum_probs=30.4
Q ss_pred HHHHHHhhhc--CCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHh
Q psy13022 13 SSSKSSMIGA--RTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYD 58 (93)
Q Consensus 13 ~~~Iek~L~~--l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~ 58 (93)
...+.++|++ ++||.+ +-..-.++.|.||+..++...+.+.|.+
T Consensus 27 v~al~~~l~~~~~~gv~e--~vP~~~sl~V~~dp~~~~~~~l~~~l~~ 72 (225)
T 2phc_B 27 VHSLAKAIEKESPEWLVE--LVPAYSSLLVIYDPLKASYEEVESYLKR 72 (225)
T ss_dssp HHHHHHHHHHHCCTTEEE--EEEETTEEEEEECTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCeEE--eeccceEEEEEEcCCcCCHHHHHHHHHH
Confidence 3345566666 788865 4455668999999887777777666654
No 67
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=38.19 E-value=58 Score=18.80 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=32.6
Q ss_pred ChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHh
Q psy13022 9 LLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYD 58 (93)
Q Consensus 9 c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~ 58 (93)
-|.=...+.+.|.++||+.--.++-..+++.|.... .+.+++.+.|++
T Consensus 15 ~p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa--~~~~~l~~~i~~ 62 (95)
T 2jsx_A 15 KSERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEA--EDSETLIQTIES 62 (95)
T ss_dssp CTTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEE--SSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEe--CCHHHHHHHHHH
Confidence 344567899999999999433344557888887764 366666666544
No 68
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=37.40 E-value=48 Score=17.64 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=18.5
Q ss_pred ecCCChhhHHHHHHhhhcCCCceEEEE
Q psy13022 5 VFLPLLDKSSSKSSMIGARTGVDSIKV 31 (93)
Q Consensus 5 v~m~c~~C~~~Iek~L~~l~GV~~v~v 31 (93)
+......-...+.+.|++++||..+..
T Consensus 51 v~~~~~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 51 IFVKNTDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEESSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEECCHHHHHHHHHHHhcCCCceEEEE
Confidence 444555556677788888888887654
No 69
>2kwa_A Kinase A inhibitor; bacterial signal transduction, KIPI, histidine kinase inhibi bacillus subtilis, transferase inhibitor; NMR {Bacillus subtilis}
Probab=36.53 E-value=34 Score=19.66 Aligned_cols=43 Identities=12% Similarity=0.079 Sum_probs=27.8
Q ss_pred HHHHHhhhc--CCCceEEEEecCCcEEEEEECCCCC----------CHHHHHHHHHh
Q psy13022 14 SSKSSMIGA--RTGVDSIKVSLADKEAVITYNPTLV----------SPKELSEAIYD 58 (93)
Q Consensus 14 ~~Iek~L~~--l~GV~~v~v~l~~~~v~V~~d~~~~----------~~~~I~~~I~~ 58 (93)
..+...|+. .+||. ++-..-.++.|.||+..+ +.+.+...|..
T Consensus 34 ~al~~~L~~~~~~Gv~--EiVPa~~SllV~ydp~~i~~~~~~~~~~~~~~l~~~L~~ 88 (101)
T 2kwa_A 34 HAAAAYIEEQPFPGFI--ECIPAFTSLTVFYDMYEVYKHLPQGISSPFESVKRDVEE 88 (101)
T ss_dssp HHHHHHHHHSCCTTEE--EEEECSSEEEEEECHHHHHTTCCTTCCSHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCCeE--EeccCceEEEEEEcchHhcccccccccCCHHHHHHHHHH
Confidence 335566666 67775 555666789999987544 45566665554
No 70
>4e0h_A Mitochondrial FAD-linked sulfhydryl oxidase ERV1; four-helix bundle, flavin-linked sulfhydryl oxidase, FAD BIN oxidation; HET: FAD; 2.00A {Saccharomyces cerevisiae}
Probab=36.20 E-value=21 Score=20.99 Aligned_cols=21 Identities=10% Similarity=-0.050 Sum_probs=17.4
Q ss_pred eecCCChhhHHHHHHhhhcCC
Q psy13022 4 EVFLPLLDKSSSKSSMIGART 24 (93)
Q Consensus 4 ~v~m~c~~C~~~Iek~L~~l~ 24 (93)
....+|+.|+.+..+.|...+
T Consensus 42 ~~~lPC~~C~~hf~~~l~~~p 62 (106)
T 4e0h_A 42 SHIYPCNWCAKDFEKYIRENA 62 (106)
T ss_dssp HHHCSSHHHHHHHHHHHHHSC
T ss_pred hhhCChHHHHHHHHHHHHHCC
Confidence 345799999999999998765
No 71
>3oep_A Putative uncharacterized protein TTHA0988; KIPI, KIPA, cyclophilin, allophanate hydrolase, structural G unknown function, NPPSFA; 1.75A {Thermus thermophilus} PDB: 3opf_A 3ore_A
Probab=35.03 E-value=76 Score=23.95 Aligned_cols=46 Identities=13% Similarity=0.142 Sum_probs=35.0
Q ss_pred hHHHHHHhhhc--CCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhC
Q psy13022 12 KSSSKSSMIGA--RTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDM 59 (93)
Q Consensus 12 C~~~Iek~L~~--l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~ 59 (93)
-+..+.+.|++ ++||.+ +-..-.++.|.||+..++.+.+.+.|++.
T Consensus 20 ~v~al~~~L~~~~~~gv~e--~vP~~~sllV~ydp~~~~~~~l~~~l~~~ 67 (494)
T 3oep_A 20 RALALAEALLRAPPPGLLD--AVPAYGVLYLEYDPRRLSRGRLLRLLKGL 67 (494)
T ss_dssp HHHHHHHHHHHSCCTTEEE--EEEETTEEEEEECTTTSCHHHHHHHHHHC
T ss_pred HHHHHHHHHhccCCCCcEE--eeccccEEEEEecCCCCCHHHHHHHHHHh
Confidence 45566777766 578755 44566788999999888999999998875
No 72
>1yj7_A ESCJ; mixed alpha/beta, extended linker, protein transport; 1.80A {Escherichia coli}
Probab=33.75 E-value=33 Score=22.07 Aligned_cols=22 Identities=23% Similarity=0.261 Sum_probs=18.5
Q ss_pred HHHHHHhhhcCCCceEEEEecC
Q psy13022 13 SSSKSSMIGARTGVDSIKVSLA 34 (93)
Q Consensus 13 ~~~Iek~L~~l~GV~~v~v~l~ 34 (93)
...+++.|..++||..++|.+.
T Consensus 92 egELartI~~i~~V~~ARVhl~ 113 (171)
T 1yj7_A 92 EQDIERLLSKIPGVIDCSVSLN 113 (171)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEEEE
Confidence 3458899999999999999764
No 73
>2f40_A Hypothetical protein PF1455; protein structure prediction, residual dipolar couplings, PY furious, simulated annealing, structural genomics; NMR {Pyrococcus furiosus} SCOP: i.11.1.1
Probab=33.36 E-value=24 Score=20.73 Aligned_cols=43 Identities=16% Similarity=0.144 Sum_probs=37.5
Q ss_pred hHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHH
Q psy13022 12 KSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSE 54 (93)
Q Consensus 12 C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~ 54 (93)
-+..++=.|...+.|-.+-+|-=.+...|.||++..+.++|.+
T Consensus 22 eA~~~QYeL~k~~avyRvFiNgYAk~g~ViFDe~kl~~e~lLe 64 (96)
T 2f40_A 22 EAKIVQYELSTRDEFYRVFINPYAKVAEVVIDDSKVNIEELKE 64 (96)
T ss_dssp TTHHHHHTTTTTTTBCCCCCCTTTTCCEEECCBCSCSHHHHHH
T ss_pred HHHHHHHHhhcchhhhhheeccccccceEEECcccCCHHHHHH
Confidence 3455667789999999999999999999999999999999888
No 74
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=33.33 E-value=34 Score=21.97 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=17.1
Q ss_pred HHHHHHhhhcCCCceEEEEec
Q psy13022 13 SSSKSSMIGARTGVDSIKVSL 33 (93)
Q Consensus 13 ~~~Iek~L~~l~GV~~v~v~l 33 (93)
...+++.|..++||..++|.+
T Consensus 90 e~ELartI~~i~gV~~ArVhl 110 (170)
T 2y9j_Y 90 EQRLEQSLQTMEGVLSARVHI 110 (170)
T ss_dssp HHHHHHHHTTSTTEEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEEE
Confidence 345788999999999998754
No 75
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=31.52 E-value=79 Score=18.38 Aligned_cols=55 Identities=9% Similarity=0.148 Sum_probs=36.2
Q ss_pred HHHHhhhcCCCceEEEEec--CCcEEEEEECC-CCCCHHHHHHHHHhCCCceeeecCCC
Q psy13022 15 SKSSMIGARTGVDSIKVSL--ADKEAVITYNP-TLVSPKELSEAIYDMGFDTKVTQVDG 70 (93)
Q Consensus 15 ~Iek~L~~l~GV~~v~v~l--~~~~v~V~~d~-~~~~~~~I~~~I~~~Gy~~~~~~~~~ 70 (93)
.+..+|...|++.--.+++ ..+.+.+.... .....+.+...+.+ ||.+..-....
T Consensus 16 ~L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~~-gf~Ve~Gs~~~ 73 (95)
T 2w7v_A 16 ALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAE-KFNVEQGQLNR 73 (95)
T ss_dssp GHHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHHT-TEEEEECCCEE
T ss_pred HHHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhhc-CcEEehhhhcc
Confidence 4567788889976666666 55566554332 23457788888876 99987755543
No 76
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=31.32 E-value=37 Score=17.93 Aligned_cols=26 Identities=15% Similarity=0.216 Sum_probs=18.7
Q ss_pred CceecCCChhhHHHHHHhhhcCCCceEEEEe
Q psy13022 2 GYEVFLPLLDKSSSKSSMIGARTGVDSIKVS 32 (93)
Q Consensus 2 ~~~v~m~c~~C~~~Iek~L~~l~GV~~v~v~ 32 (93)
++.+.+++.. -+.|...|||..++-|
T Consensus 34 a~~~~lp~~~-----~~~L~~~p~V~yVE~D 59 (65)
T 2z30_B 34 AVVVDVPANA-----VGKLKKMPGVEKVEFD 59 (65)
T ss_dssp EEEEEECGGG-----HHHHHTSTTEEEEEEC
T ss_pred EEEEEeCHHH-----HHHHhcCCCceEEecC
Confidence 4567777655 3568899999887765
No 77
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=30.29 E-value=94 Score=25.08 Aligned_cols=45 Identities=20% Similarity=0.290 Sum_probs=35.5
Q ss_pred HHHHHhhhcCCCceEEEEecCCcEEEEEECCC-----CCCHHHHHHHHHh
Q psy13022 14 SSKSSMIGARTGVDSIKVSLADKEAVITYNPT-----LVSPKELSEAIYD 58 (93)
Q Consensus 14 ~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~-----~~~~~~I~~~I~~ 58 (93)
..+++.|+++|||.++++.-....+.|.+|+. .++..+|.++|+.
T Consensus 160 ~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v~~~l~~ 209 (1057)
T 4dx5_A 160 ANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKA 209 (1057)
T ss_dssp HHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHH
Confidence 57889999999999999865545566777762 3678889999986
No 78
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=28.88 E-value=50 Score=21.23 Aligned_cols=37 Identities=16% Similarity=0.109 Sum_probs=27.9
Q ss_pred CCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCC
Q psy13022 23 RTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGF 61 (93)
Q Consensus 23 l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy 61 (93)
-.+|...-|+..++++.|..++. ........+...|-
T Consensus 113 ~~~v~~W~VD~~tN~VVV~a~~~--~~~aa~~f~~~AG~ 149 (166)
T 3pro_C 113 LDGVQSWYVDPRSNAVVVKVDDG--ATDAGVDFVALSGA 149 (166)
T ss_dssp CTTEEEEEEEGGGTEEEEEEETT--CHHHHHHHHHHHTC
T ss_pred CCCCceEEEeCCCCeEEEEeCCC--ChHHHHHHHHHhCC
Confidence 34678899999999999998754 44555666777774
No 79
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=28.76 E-value=1e+02 Score=24.89 Aligned_cols=46 Identities=22% Similarity=0.276 Sum_probs=36.2
Q ss_pred HHHHHhhhcCCCceEEEEecCCcEEEEEECCC-----CCCHHHHHHHHHhC
Q psy13022 14 SSKSSMIGARTGVDSIKVSLADKEAVITYNPT-----LVSPKELSEAIYDM 59 (93)
Q Consensus 14 ~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~-----~~~~~~I~~~I~~~ 59 (93)
..+++.|+++|||.+++++-....+.|..|+. .++.++|.++|+..
T Consensus 160 ~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~~ 210 (1052)
T 2v50_A 160 SNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQAQ 210 (1052)
T ss_dssp HHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHhc
Confidence 56899999999999999885445666777763 47888999999754
No 80
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=26.89 E-value=75 Score=16.63 Aligned_cols=37 Identities=11% Similarity=0.010 Sum_probs=24.2
Q ss_pred CCCHHHHHHHHHhCCCceeeecCCCCCccccceeeec
Q psy13022 46 LVSPKELSEAIYDMGFDTKVTQVDGKPYVPETNVNTS 82 (93)
Q Consensus 46 ~~~~~~I~~~I~~~Gy~~~~~~~~~~~~~~~~~~~~~ 82 (93)
-.+.++..+.|++.||..........++...++..++
T Consensus 15 G~~~~~A~~~L~~~Gl~~~~~~~~~~~~~~G~Vi~q~ 51 (71)
T 3ouv_A 15 GQTVDVAQKNMNVYGFTKFSQASVDSPRPAGEVTGTN 51 (71)
T ss_dssp TCBHHHHHHHHHHTTCCCEEEEEECCSSCTTBEEEEE
T ss_pred CCCHHHHHHHHHHCCCeEEEEEEeCCCCCCCEEEEee
Confidence 3577888999999999876543323334445666554
No 81
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=26.63 E-value=1.1e+02 Score=18.21 Aligned_cols=53 Identities=9% Similarity=0.058 Sum_probs=29.8
Q ss_pred hhhHHHHHHhhhcCCC-ceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCcee
Q psy13022 10 LDKSSSKSSMIGARTG-VDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTK 64 (93)
Q Consensus 10 ~~C~~~Iek~L~~l~G-V~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~ 64 (93)
|+-..++-+.|.+..- |...-......+..+.++. .+.+...+.|.+.||++.
T Consensus 83 pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~--~d~~~A~~~L~~~g~~v~ 136 (144)
T 2f06_A 83 PGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP--SNMDKCIEVLKEKKVDLL 136 (144)
T ss_dssp TTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE--SCHHHHHHHHHHTTCEEE
T ss_pred CcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe--CCHHHHHHHHHHcCCEEe
Confidence 5566777777765432 2121111033444444332 377888888888898763
No 82
>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=26.35 E-value=52 Score=21.17 Aligned_cols=47 Identities=9% Similarity=0.126 Sum_probs=28.2
Q ss_pred cCCChhhHHHHHHhhhcCCCceEEEEecCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 6 FLPLLDKSSSKSSMIGARTGVDSIKVSLADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 6 ~m~c~~C~~~Iek~L~~l~GV~~v~v~l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
--||+.|+..|-.+ ||..|-+- ...+. .. ....+.+++.|.++..+.
T Consensus 129 ~ePC~~Ca~aIi~a-----GI~rVvy~--------~~~~~-~~-~~~~~~l~~aGI~v~~~~ 175 (193)
T 1vq2_A 129 LSPCPDCAKAIAQS-----GIKKLVYC--------ETYDK-NK-PGWDDILRNAGIEVFNVP 175 (193)
T ss_dssp ECCCHHHHHHHHHH-----TCCEEEEE--------ECCTT-CC-TTTTHHHHHTTCEEEECC
T ss_pred CCCcHHHHHHHHHh-----CCCEEEEe--------cCCCC-cc-hHHHHHHHHCCCEEEEeC
Confidence 45899999998776 66654432 21121 11 111467888998876543
No 83
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=24.25 E-value=1.1e+02 Score=17.69 Aligned_cols=26 Identities=8% Similarity=0.160 Sum_probs=21.2
Q ss_pred EEEEEECCCCCCH--HHHHHHHHhCCCc
Q psy13022 37 EAVITYNPTLVSP--KELSEAIYDMGFD 62 (93)
Q Consensus 37 ~v~V~~d~~~~~~--~~I~~~I~~~Gy~ 62 (93)
.+.|.+.++..++ +.|..++...||.
T Consensus 19 ~V~V~lKpgVlDPqG~aV~~aL~~LG~~ 46 (94)
T 1vq3_A 19 AIDVQYRSNVRDPRGETIERVLREEKGL 46 (94)
T ss_dssp EEEEEECTTSCCHHHHHHHHHHHHTTCC
T ss_pred EEEEEECCCCcCcHHHHHHHHHHHcCCC
Confidence 4567888887777 4789999999997
No 84
>3gwl_A P14, FAD-linked sulfhydryl oxidase; homodimer, five-helix bundle, cytoplasm, disulfide bond, flavoprotein, late protein; HET: FAD; 2.10A {African swine fever virus BA71V}
Probab=24.24 E-value=26 Score=20.71 Aligned_cols=20 Identities=15% Similarity=0.024 Sum_probs=16.7
Q ss_pred ecCCChhhHHHHHHhhhcCC
Q psy13022 5 VFLPLLDKSSSKSSMIGART 24 (93)
Q Consensus 5 v~m~c~~C~~~Iek~L~~l~ 24 (93)
-..+|..|+.+..+.+.+.+
T Consensus 43 ~~yPC~~Ca~hf~~~~~~~p 62 (106)
T 3gwl_A 43 ESLPCTRCQHHAFSYLTKNP 62 (106)
T ss_dssp HHCSCHHHHHHHHHHHHHSC
T ss_pred HHCCCHHHHHHHHHHHHhCC
Confidence 34899999999999998654
No 85
>3u5s_A FAD-linked sulfhydryl oxidase ALR; flavin, liver, oxidoreductase; HET: FAD; 1.50A {Homo sapiens} PDB: 3mbg_A* 3tk0_A* 3o55_A* 3u2m_A* 3u2l_A* 3r7c_A* 1oqc_A*
Probab=23.77 E-value=32 Score=20.98 Aligned_cols=22 Identities=9% Similarity=0.268 Sum_probs=18.4
Q ss_pred ceecCCChhhHHHHHHhhhcCC
Q psy13022 3 YEVFLPLLDKSSSKSSMIGART 24 (93)
Q Consensus 3 ~~v~m~c~~C~~~Iek~L~~l~ 24 (93)
|....+|..|+.+..+.|.+.+
T Consensus 57 l~~~lPC~~C~~hf~~~l~~~p 78 (126)
T 3u5s_A 57 FSKFYPXEEXAEDLRKRLARNH 78 (126)
T ss_dssp HHHHCSSHHHHHHHHHHHHHSC
T ss_pred HHHhCCchHHHHHHHHHHHHCc
Confidence 3345899999999999999876
No 86
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=22.45 E-value=79 Score=18.44 Aligned_cols=31 Identities=10% Similarity=0.174 Sum_probs=21.3
Q ss_pred CCcEEEEEECCCCCCHHHHHHHHHhCCCceee
Q psy13022 34 ADKEAVITYNPTLVSPKELSEAIYDMGFDTKV 65 (93)
Q Consensus 34 ~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~ 65 (93)
....+.+... ..++.+++.+.+..+||.-..
T Consensus 11 ~~~~l~l~~G-~~i~~~~l~~~L~~~GY~r~~ 41 (106)
T 3fpn_B 11 RELVVSLRVG-MEIERNALLRRLVDIQYDRND 41 (106)
T ss_dssp --CCEEEETT-CBCCHHHHHHHHHHTTCEECT
T ss_pred hhCCeEEECC-CCcCHHHHHHHHHHcCCEECC
Confidence 3444455533 358999999999999998543
No 87
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=22.11 E-value=66 Score=17.81 Aligned_cols=23 Identities=9% Similarity=0.078 Sum_probs=15.1
Q ss_pred CChhh---HHHHHHhhh-cCCCceEEE
Q psy13022 8 PLLDK---SSSKSSMIG-ARTGVDSIK 30 (93)
Q Consensus 8 ~c~~C---~~~Iek~L~-~l~GV~~v~ 30 (93)
+|.+| ...||+.|+ .+|.+..|.
T Consensus 45 aC~gc~Tlk~gIe~~L~~~vpei~~V~ 71 (74)
T 1th5_A 45 PAAVVRTVRIAVSKKLREKIPSIQIVQ 71 (74)
T ss_dssp SSSSSSSHHHHHHHHHHHHCTTCSEEE
T ss_pred CCcchHHHHHHHHHHHHHHCCCCcEEE
Confidence 46666 345777776 667777654
No 88
>3gwn_A Probable FAD-linked sulfhydryl oxidase R596; five helix bundle, homodimer, disulfide bond, flavoprot oxidoreductase, virion; HET: FAD; 1.78A {Acanthamoeba polyphaga mimivirus}
Probab=21.32 E-value=32 Score=20.57 Aligned_cols=20 Identities=20% Similarity=0.049 Sum_probs=16.9
Q ss_pred ecCCChhhHHHHHHhhhcCC
Q psy13022 5 VFLPLLDKSSSKSSMIGART 24 (93)
Q Consensus 5 v~m~c~~C~~~Iek~L~~l~ 24 (93)
-..+|..|+.+..+.+.+.+
T Consensus 45 ~~yPC~~Ca~hf~~~~~~~p 64 (114)
T 3gwn_A 45 DVLPCRLCRESYKKFITTGK 64 (114)
T ss_dssp HHCSSHHHHHHHHHHTTSGG
T ss_pred HHCCCHHHHHHHHHHHHHCC
Confidence 35799999999999988765
No 89
>4ee6_A Prenyltransferase; PT fold; HET: MLY MLZ PG4; 1.33A {Streptomyces cinnamonensis} PDB: 4ee8_A* 4ee7_A* 4ee6_B*
Probab=20.88 E-value=2.3e+02 Score=20.07 Aligned_cols=41 Identities=7% Similarity=0.245 Sum_probs=34.7
Q ss_pred cC-CCceEEEEecCCcEEEEEEC--------CCCCCHHHHHHHHHhCCCc
Q psy13022 22 AR-TGVDSIKVSLADKEAVITYN--------PTLVSPKELSEAIYDMGFD 62 (93)
Q Consensus 22 ~l-~GV~~v~v~l~~~~v~V~~d--------~~~~~~~~I~~~I~~~Gy~ 62 (93)
.+ +-|.-+-|++..+++-+-|. +.....+.+...+.++|..
T Consensus 156 GL~d~V~~vgvDy~~rT~NlYF~~~~~~~~~p~~~~~~~v~~~l~e~G~p 205 (304)
T 4ee6_A 156 GIADMVSTVGIDYSKRTMNLYFGGGVGDRVPAGVFEEKGVRAILGELGLA 205 (304)
T ss_dssp TCTTCEEEEEEETTTTEEEEEECCTTSCCCCGGGTSHHHHHHHHHHTTCC
T ss_pred cchhheeeEEeeccCCeeEEEEeccccccCCCccccHHHHHHHHHhcCCC
Confidence 34 67899999999999999883 4567888999999999975
No 90
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=20.22 E-value=1.5e+02 Score=18.54 Aligned_cols=28 Identities=14% Similarity=0.255 Sum_probs=20.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHhCCCceeee
Q psy13022 37 EAVITYNPTLVSPKELSEAIYDMGFDTKVT 66 (93)
Q Consensus 37 ~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~ 66 (93)
.+.|.|. .-+...|..+|+++|+++...
T Consensus 5 I~iiD~g--~~n~~si~~al~~~G~~~~v~ 32 (211)
T 4gud_A 5 VVIIDTG--CANISSVKFAIERLGYAVTIS 32 (211)
T ss_dssp EEEECCC--CTTHHHHHHHHHHTTCCEEEE
T ss_pred EEEEECC--CChHHHHHHHHHHCCCEEEEE
Confidence 3445553 347889999999999998765
No 91
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.17 E-value=76 Score=18.93 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=25.8
Q ss_pred cCCcEEEEEECCCCCCHHHHHHHHHhCCCceeeec
Q psy13022 33 LADKEAVITYNPTLVSPKELSEAIYDMGFDTKVTQ 67 (93)
Q Consensus 33 l~~~~v~V~~d~~~~~~~~I~~~I~~~Gy~~~~~~ 67 (93)
+..+...|.||..+-.+++....+..-||++.-..
T Consensus 74 lgaqvliiiydqdqnrleefsrevrrrgfevrtvt 108 (134)
T 2l69_A 74 LGAQVLIIIYDQDQNRLEEFSREVRRRGFEVRTVT 108 (134)
T ss_dssp HCCCCEEEEECSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred cCCeEEEEEEeCchhHHHHHHHHHHhcCceEEEec
Confidence 34556677888776667788888889999876543
Done!