BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1303
(206 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acads PE=1 SV=2
Length = 412
Score = 257 bits (656), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 156/205 (76%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC T I++V+N LY G I KFG+ +QK+ ++ F +G +GCF +SEPG+GSDA
Sbjct: 108 GCASTGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAAS 167
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKK 120
TTAR+E D WVLNGTK+WITN +EA A V A D+S+++KGI+AF++PM +PGL+LGKK
Sbjct: 168 TTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPTPGLTLGKK 227
Query: 121 EDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAF 180
EDKLGIRASST N+I ED +IP +++LG+ G GFK+ + +D RIG+ASQ +GIAQA+
Sbjct: 228 EDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIASQALGIAQASL 287
Query: 181 DCAMEYAGKRIAFGAPILKLQAVQL 205
DCA++YA R AFGAP+ KLQ +Q
Sbjct: 288 DCAVKYAENRHAFGAPLTKLQNIQF 312
>sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADS PE=1 SV=1
Length = 412
Score = 257 bits (656), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 152/205 (74%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC T I++V+N LY G I KFG+K+QK+ ++ F G +GCF +SEPG+GSDA
Sbjct: 108 GCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAAS 167
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKK 120
TTAR E D WVLNGTK+WITN +EA A V A D++ ++KGI+AF++PM +PGL+LGKK
Sbjct: 168 TTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPTPGLTLGKK 227
Query: 121 EDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAF 180
EDKLGIR SST N+I ED +IP DS+LG+ G GFK+ + +D RIG+ASQ +GIAQ A
Sbjct: 228 EDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTAL 287
Query: 181 DCAMEYAGKRIAFGAPILKLQAVQL 205
DCA+ YA R+AFGAP+ KLQ +Q
Sbjct: 288 DCAVNYAENRMAFGAPLTKLQVIQF 312
>sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo
abelii GN=ACADS PE=2 SV=1
Length = 412
Score = 256 bits (655), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 117/205 (57%), Positives = 152/205 (74%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC T I++V+N LY G I KFG+K+QK+ ++ F G +GCF +SEPG+GSDA
Sbjct: 108 GCASTGVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSGDKIGCFALSEPGNGSDAGAAS 167
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKK 120
TTAR E D WVLNGTK+WITN +EA A V A D++ ++KGI+AF++PM +PGL+LGKK
Sbjct: 168 TTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLVPMPTPGLTLGKK 227
Query: 121 EDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAF 180
EDKLGIR SST N+I ED +IP DS+LG+ G GFK+ + +D RIG+ASQ +GIAQ A
Sbjct: 228 EDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTAL 287
Query: 181 DCAMEYAGKRIAFGAPILKLQAVQL 205
DCA+ YA R+AFGAP+ KLQ +Q
Sbjct: 288 DCAVNYAENRMAFGAPLTKLQVIQF 312
>sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acads PE=2 SV=2
Length = 412
Score = 255 bits (651), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 155/205 (75%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
C T I++V+N LY G I KFG+ +QK+ ++ F +G +GCF +SEPG+GSDA
Sbjct: 108 ACASTGVIMSVNNSLYLGPILKFGSAQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAAS 167
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKK 120
TTAR+E D WVLNGTK+WITN +EA A V A D+S+++KGI+AF++PM +PGL+LGKK
Sbjct: 168 TTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFLVPMPTPGLTLGKK 227
Query: 121 EDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAF 180
EDKLGIRASST N+I ED +IP +++LG+ G GFK+ + +D RIG+ASQ +GIAQA+
Sbjct: 228 EDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIASQALGIAQASL 287
Query: 181 DCAMEYAGKRIAFGAPILKLQAVQL 205
DCA++YA R AFGAP+ KLQ +Q
Sbjct: 288 DCAVKYAENRNAFGAPLTKLQNIQF 312
>sp|Q3ZBF6|ACADS_BOVIN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADS PE=2 SV=1
Length = 412
Score = 246 bits (627), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 153/205 (74%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC T I++V+N LY G I KFGTK+QK+ ++ F G +GCF +SEPG+GSDA
Sbjct: 108 GCASTGVIMSVNNSLYLGPILKFGTKEQKQQWVAPFTSGDKIGCFALSEPGNGSDAGAAA 167
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKK 120
TTAR + D WVL+GTK+WITN +EA A V A D+S +KGI+AF++PM +PGL+LGKK
Sbjct: 168 TTARADGDSWVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFLVPMPTPGLTLGKK 227
Query: 121 EDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAF 180
EDKLGIRASST N+I ED +IP DS+LG+ G GFK+ + +D RIG+ASQ +GIAQAA
Sbjct: 228 EDKLGIRASSTANLIFEDRRIPKDSLLGEPGLGFKIAMQTLDTGRIGIASQALGIAQAAL 287
Query: 181 DCAMEYAGKRIAFGAPILKLQAVQL 205
DCA+ YA R AFGAP+ KLQA+Q
Sbjct: 288 DCAVTYAENRSAFGAPLTKLQAIQF 312
>sp|P79273|ACADS_PIG Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADS PE=2 SV=1
Length = 413
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/205 (54%), Positives = 151/205 (73%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC T I++V+N LY G I KFG+K+QK+ ++ F G VGCF +SEPG+GSDA
Sbjct: 108 GCASTGVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSGDKVGCFALSEPGNGSDAGAAA 167
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKK 120
TTA+ + D WVL+GTK+WITN +EA A V A D+S ++KGI+AF++PM + GL+LGKK
Sbjct: 168 TTAQADHDSWVLSGTKAWITNAWEASAAVVFASTDRSLQNKGISAFLVPMPTAGLTLGKK 227
Query: 121 EDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAF 180
EDKLGIRASST N+I ED +IP +++LG+ G GFK+ + +D RIG+AS+ +GI+QAA
Sbjct: 228 EDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMKTLDMGRIGIASKALGISQAAL 287
Query: 181 DCAMEYAGKRIAFGAPILKLQAVQL 205
DCA+ YA R AFG P+ KLQ +Q
Sbjct: 288 DCAVNYAENRRAFGVPLTKLQGIQF 312
>sp|Q54RR5|ACDSB_DICDI Probable short/branched chain specific acyl-CoA dehydrogenase
OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1
Length = 413
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 132/201 (65%), Gaps = 2/201 (0%)
Query: 6 STILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARK 65
S I+ V N L IN++G+ +Q+E YL T VG F +SE GSGSDA + T A +
Sbjct: 114 SVIVDVQNTLVNNCINRYGSIQQREKYLSMLATNT-VGSFCLSESGSGSDAFALATRAVR 172
Query: 66 ESD-HWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKL 124
+SD +VLNGTK WITN EA F+ +A D S+ +KGITAFI+ ++PGL +GKKEDKL
Sbjct: 173 QSDGTFVLNGTKQWITNAKEAGVFIVMANVDPSQGYKGITAFIVESNNPGLRIGKKEDKL 232
Query: 125 GIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAM 184
GIRASSTC VIL++ + +LG+ G G+K+ + G++ RIG+A+Q +G+AQ FD +
Sbjct: 233 GIRASSTCEVILDNCVVKPTDILGELGRGYKIAIEGLNEGRIGIAAQMLGLAQGVFDSTI 292
Query: 185 EYAGKRIAFGAPILKLQAVQL 205
Y +R FG PI Q +Q
Sbjct: 293 PYLMERKQFGKPIATFQGMQF 313
>sp|P52042|ACDS_CLOAB Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=bcd PE=3 SV=1
Length = 379
Score = 187 bits (474), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 132/202 (65%)
Query: 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLT 61
CG T IL+ H L A LIN+ GT++QK+ YL G +G +G++EP +G+D+ T
Sbjct: 80 CGTTGVILSAHTSLCASLINEHGTEEQKQKYLVPLAKGEKIGAYGLTEPNAGTDSGAQQT 139
Query: 62 TARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKE 121
A E DH+V+NG+K +ITNG A FV A D++K KGI+AFII G S+GK E
Sbjct: 140 VAVLEGDHYVINGSKIFITNGGVADTFVIFAMTDRTKGTKGISAFIIEKGFKGFSIGKVE 199
Query: 122 DKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFD 181
KLGIRASST ++ ED+ +P+++++GKEG+GF + + +D RIG+A+Q +GIA+ AF+
Sbjct: 200 QKLGIRASSTTELVFEDMIVPVENMIGKEGKGFPIAMKTLDGGRIGIAAQALGIAEGAFN 259
Query: 182 CAMEYAGKRIAFGAPILKLQAV 203
A Y +R FG + K Q +
Sbjct: 260 EARAYMKERKQFGRSLDKFQGL 281
>sp|Q06319|ACDS_MEGEL Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera
elsdenii PE=1 SV=1
Length = 383
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 135/203 (66%), Gaps = 1/203 (0%)
Query: 4 GTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTA 63
G + L+ L A I +FGT+ QKE +L V+GT +G FG++EP +G+DA+ T A
Sbjct: 85 GVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIA 144
Query: 64 RKESD-HWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKED 122
K D + LNG+K +ITNG A ++ A DKSK + GITAFI+ +PG + GKKED
Sbjct: 145 TKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKGNHGITAFILEDGTPGFTYGKKED 204
Query: 123 KLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDC 182
K+GI S T ++ +DVK+P +++LG+EG+GFK+ + +D RIG+A+Q +GIA+AA
Sbjct: 205 KMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAALAD 264
Query: 183 AMEYAGKRIAFGAPILKLQAVQL 205
A+EY+ +R+ FG P+ K Q++
Sbjct: 265 AVEYSKQRVQFGKPLCKFQSISF 287
>sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA
PE=2 SV=1
Length = 379
Score = 177 bits (448), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 123/202 (60%)
Query: 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLT 61
C T L+ H L + + FGT++QK YL G +G F ++E GSGSDA +M T
Sbjct: 80 CASTGVTLSAHISLCSWPLFAFGTEEQKTEYLTQLALGEKIGAFALTEAGSGSDAGSMKT 139
Query: 62 TARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKE 121
TA + D +VLNG+K +ITNG A ++ A D KK KG+TAFI+ D G GKKE
Sbjct: 140 TAERIGDDYVLNGSKVFITNGGVADIYIVFAVTDPEKKKKGVTAFIVEKDFEGFFTGKKE 199
Query: 122 DKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFD 181
KLGIR+S T ++ ED +P LG+EGEGFK+ + +D R G+A+Q +GIAQ A D
Sbjct: 200 KKLGIRSSPTTEIMFEDCVVPASKRLGEEGEGFKIAMKTLDGGRNGIAAQAVGIAQGALD 259
Query: 182 CAMEYAGKRIAFGAPILKLQAV 203
A++YA +R FG I + Q +
Sbjct: 260 AALQYAKERKQFGKSIAEQQGI 281
>sp|P45954|ACDSB_HUMAN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADSB PE=1 SV=1
Length = 432
Score = 174 bits (440), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 11 VHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHW 70
+ N L LI K GT++QK TYLP VG F +SE G+GSD+ + T A KE D++
Sbjct: 141 IQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGDYY 199
Query: 71 VLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASS 130
VLNG+K WI++ A F+ +A D + +KGIT+F++ D+PGL +GK E+KLG+RASS
Sbjct: 200 VLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASS 259
Query: 131 TCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKR 190
TC + E+VK+P ++LG+ G G+K + ++ RIG+A+Q +G+AQ FD + Y +R
Sbjct: 260 TCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKER 319
Query: 191 IAFGAPILKLQAVQ 204
I FG + Q +Q
Sbjct: 320 IQFGKRLFDFQGLQ 333
>sp|Q5RF40|ACDSB_PONAB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Pongo abelii GN=ACADSB PE=2 SV=1
Length = 432
Score = 173 bits (439), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 11 VHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHW 70
+ N L LI K GT++QK TYLP VG F +SE G+GSD+ + T A KE D++
Sbjct: 141 IQNTLINTLIRKHGTEEQKGTYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGDYY 199
Query: 71 VLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASS 130
VLNG+K WI++ A F+ +A D + +KGIT+F++ D+PGL +GK E+KLG+RASS
Sbjct: 200 VLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASS 259
Query: 131 TCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKR 190
TC + E+VK+P ++LG+ G G+K + ++ RIG+A+Q +G+AQ FD + Y +R
Sbjct: 260 TCPLTFENVKVPETNILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKER 319
Query: 191 IAFGAPILKLQAVQ 204
I FG + Q +Q
Sbjct: 320 IQFGKRLFDFQGLQ 333
>sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC
PE=2 SV=3
Length = 379
Score = 170 bits (431), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 130/199 (65%)
Query: 7 TILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKE 66
IL+VH + I FG ++QK Y+P+ G ++G F ++EP SGSDA ++ TTA K+
Sbjct: 83 VILSVHTSVGTNPILYFGNEEQKMKYIPNLASGDHLGAFALTEPHSGSDAGSLRTTAIKK 142
Query: 67 SDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGI 126
+ ++LNG+K +ITNG A ++ A + GI+AFI+ ++PG ++GKKE KLG+
Sbjct: 143 NGKYLLNGSKIFITNGGAADIYITFALTAPDQGRHGISAFIVEKNTPGFTVGKKERKLGL 202
Query: 127 RASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEY 186
S+T +I ++ ++P ++LGKEG+GF + + ++ RIG+A+Q +GIA+AA + A++Y
Sbjct: 203 YGSNTTELIFDNAEVPEANLLGKEGDGFHIAMANLNVGRIGIAAQALGIAEAALEHAVDY 262
Query: 187 AGKRIAFGAPILKLQAVQL 205
A +R+ FG PI Q +
Sbjct: 263 AKQRVQFGRPIAANQGISF 281
>sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadsb PE=1 SV=1
Length = 432
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 122/194 (62%), Gaps = 1/194 (0%)
Query: 11 VHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHW 70
+ N + L K GT++QK TYLP V +G F +SE G+GSD+ + T A K +++
Sbjct: 141 IQNTVINKLFRKHGTEEQKATYLPKLVT-EKLGSFCLSEAGAGSDSFALKTRADKSGNYY 199
Query: 71 VLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASS 130
V+NG+K WI+N A+ F+ A D ++GIT F++ D+ G +G++E+K+GIRASS
Sbjct: 200 VINGSKMWISNAEHAELFLVFANVDPPSGYRGITCFLVDRDTEGFQIGRRENKMGIRASS 259
Query: 131 TCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKR 190
TC + E+VK+P SVLGK G G+K + ++ RIG+A+Q +G+AQ FD + Y +R
Sbjct: 260 TCQLTFENVKVPETSVLGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKER 319
Query: 191 IAFGAPILKLQAVQ 204
+ FG I Q +Q
Sbjct: 320 MQFGKRIFDFQGLQ 333
>sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadsb PE=1 SV=1
Length = 432
Score = 166 bits (421), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 122/194 (62%), Gaps = 1/194 (0%)
Query: 11 VHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHW 70
+ N + L K +++QK TYLP V +G F +SE G+GSD+ M T A K +++
Sbjct: 141 IQNTIINNLFRKHASEEQKATYLPKLVT-EKLGSFCLSEAGAGSDSFAMKTRADKSGNYY 199
Query: 71 VLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASS 130
VLNG+K WI++ A+ F+ A D S ++GIT F++ D+ G +GK+E+K+GIRASS
Sbjct: 200 VLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCFLVDRDTEGFQIGKRENKMGIRASS 259
Query: 131 TCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKR 190
TC + E+VK+P ++LGK G G+K + ++ RIG+A+Q +G+AQ FD + Y +R
Sbjct: 260 TCQLTFENVKVPETNILGKIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKER 319
Query: 191 IAFGAPILKLQAVQ 204
+ FG I Q +Q
Sbjct: 320 MQFGKRIFDFQGLQ 333
>sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain
168) GN=yngJ PE=3 SV=1
Length = 380
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
Query: 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLT 61
CG T L A + FGT++QK+T+L GT +G FG++EP +GSDA T
Sbjct: 80 CGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQT 139
Query: 62 TARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGI-TAFIIPMDSPGLSLGKK 120
A D +V+NG K WITN A+ + A K+K K I +A I+P D+PGL++
Sbjct: 140 KAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKNIISALIVPTDTPGLTITSP 199
Query: 121 EDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAF 180
DK+G+R S+T ++LEDV++P ++LG +GFK L +D RI +A+ +GIAQAA
Sbjct: 200 YDKMGVRGSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTLDGGRISIAALAVGIAQAAL 259
Query: 181 DCAMEYAGKRIAFGAPILKLQAVQL 205
D ++ YA +R FG PI QA+Q
Sbjct: 260 DASLAYAKERKQFGQPISSFQAIQF 284
>sp|Q5EAD4|ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADSB PE=2 SV=1
Length = 432
Score = 163 bits (413), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 122/194 (62%), Gaps = 1/194 (0%)
Query: 11 VHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHW 70
+ N L +I K+GT++QK TYLP ISE G+GSD+ M T A K+ D++
Sbjct: 141 IQNTLINRMIGKYGTEEQKATYLPKLAT-EKASSICISETGAGSDSFAMKTRADKKGDYY 199
Query: 71 VLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASS 130
++NG+K WI++ A FV +A AD S +KGIT F++ D+ GL +GK E+KLGIRASS
Sbjct: 200 IINGSKMWISSAEIAGLFVVMANADFSAGYKGITCFLVDGDTEGLHVGKPENKLGIRASS 259
Query: 131 TCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKR 190
TC V E+VK+P ++LG+ G G+K + ++ RIG+A+Q +G+AQ FD + Y +R
Sbjct: 260 TCPVTFENVKVPKTNILGQVGHGYKYAIGSLNEGRIGIAAQMLGVAQGCFDYTIPYIKER 319
Query: 191 IAFGAPILKLQAVQ 204
FG + Q +Q
Sbjct: 320 KQFGRRVFDFQGLQ 333
>sp|P12007|IVD_RAT Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ivd PE=1 SV=2
Length = 424
Score = 160 bits (405), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 115/195 (58%), Gaps = 2/195 (1%)
Query: 12 HNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWV 71
H+ L I + G + QKE YLP + G +G +SEP +GSD +M A K+ DH+V
Sbjct: 130 HSNLCINQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMRLKAEKKGDHYV 189
Query: 72 LNGTKSWITNGYEAKAFVCIAQADKS--KKHKGITAFIIPMDSPGLSLGKKEDKLGIRAS 129
LNG K WITNG +A V A+ D + +GITAFI+ D PG S KK DKLG+R S
Sbjct: 190 LNGNKFWITNGPDADVLVVYAKTDLTAVPASRGITAFIVEKDMPGFSTSKKLDKLGMRGS 249
Query: 130 STCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGK 189
+TC ++ ED K+P ++L +E +G V ++G+D R+ +A +GI QA D + Y
Sbjct: 250 NTCELVFEDCKVPAANILSQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHV 309
Query: 190 RIAFGAPILKLQAVQ 204
R AFG I + Q +Q
Sbjct: 310 REAFGQKIGQFQLMQ 324
>sp|Q9JHI5|IVD_MOUSE Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd
PE=1 SV=1
Length = 424
Score = 157 bits (397), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 114/195 (58%), Gaps = 2/195 (1%)
Query: 12 HNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWV 71
H+ L I + G + QKE YLP + G +G +SEP +GSD +M A K+ DH+V
Sbjct: 130 HSNLCVNQIVRNGNEAQKEKYLPKLISGEFIGALAMSEPNAGSDVVSMKLKAEKKGDHYV 189
Query: 72 LNGTKSWITNGYEAKAFVCIAQADKS--KKHKGITAFIIPMDSPGLSLGKKEDKLGIRAS 129
LNG K WITNG +A V A+ D + +GITAFI+ PG S KK DKLG+R S
Sbjct: 190 LNGNKFWITNGPDADILVVYAKTDLTAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGS 249
Query: 130 STCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGK 189
+TC ++ ED K+P +VL +E +G V ++G+D R+ +A +GI QA D + Y
Sbjct: 250 NTCELVFEDCKVPAANVLSQESKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHV 309
Query: 190 RIAFGAPILKLQAVQ 204
R AFG I + Q +Q
Sbjct: 310 REAFGQKIGQFQLMQ 324
>sp|Q54IM8|ACAD8_DICDI Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=acad8 PE=3 SV=1
Length = 416
Score = 157 bits (396), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 129/201 (64%), Gaps = 1/201 (0%)
Query: 5 TSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTAR 64
T+ +++HN + AGLI+ +GT++Q++ +LPS V + + ++EPGSGSDA ++ T A
Sbjct: 117 TTAFISIHN-MCAGLIDIYGTEEQRKKFLPSLVSMEKIASYCLTEPGSGSDAGSLSTKAT 175
Query: 65 KESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKL 124
K+ DH++LNG+K++I+ G +++ ++ + + K KGI+ ++ D+PGLS GKKE+KL
Sbjct: 176 KDGDHYILNGSKAFISGGGDSEVYLVMVRTGAEKGPKGISCLLVEKDTPGLSFGKKEEKL 235
Query: 125 GIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAM 184
G T +I ED ++P+ +++GKEG+GF + + ++ RI + + +G AQ+ A
Sbjct: 236 GWNTQPTRALIFEDCRVPVGNLIGKEGQGFSIAMNALNGGRINIGACSLGGAQSCLVAAR 295
Query: 185 EYAGKRIAFGAPILKLQAVQL 205
++ R F P+ QAVQ
Sbjct: 296 DHVKVRKQFNQPLEHFQAVQF 316
>sp|Q3SZI8|IVD_BOVIN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD
PE=2 SV=1
Length = 426
Score = 155 bits (393), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
Query: 12 HNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWV 71
H+ L I + G + QKE YLP + G +G +SEP +GSD +M A K+ DH+V
Sbjct: 132 HSNLCINQIVRNGNETQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGDHYV 191
Query: 72 LNGTKSWITNGYEAKAFVCIAQADKS--KKHKGITAFIIPMDSPGLSLGKKEDKLGIRAS 129
LNG K WITNG +A V A+ D + +GITAFI+ PG S KK DKLG+R S
Sbjct: 192 LNGNKFWITNGPDADVLVVYAKTDVTAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGS 251
Query: 130 STCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGK 189
+TC ++ ED ++P ++LG G+G V ++G+D R+ +A +GI QA D + Y
Sbjct: 252 NTCELVFEDCEVPAANILGHLGKGVYVLMSGLDLERLVLAGGPLGIMQAVLDHTIPYLHM 311
Query: 190 RIAFGAPILKLQAVQ 204
R AFG I Q +Q
Sbjct: 312 REAFGQKIGHFQLMQ 326
>sp|Q9FS88|IVD1_SOLTU Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum
GN=IVD1 PE=2 SV=1
Length = 412
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 109/181 (60%)
Query: 24 GTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITNGY 83
GT QK+ YLP + G ++G +SEP +GSD +M A + +VLNG K W TNG
Sbjct: 133 GTPDQKQKYLPKLISGDHIGALAMSEPNAGSDVVSMKCRADRVDGGYVLNGNKMWCTNGP 192
Query: 84 EAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPL 143
A + A+ D + KGITAFII + PG S +K DKLG+R S TC ++ E+ +P
Sbjct: 193 VANTLIVYAKTDTTAGSKGITAFIIEKEMPGFSTAQKLDKLGMRGSDTCELVFENCFVPK 252
Query: 144 DSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAV 203
++VLG+EG+G V ++G+D R+ +A+ +GI QA D + Y +R FG PI + Q +
Sbjct: 253 ENVLGQEGKGVYVLMSGLDLERLVLAAGPVGIMQACMDIVIPYVRQREQFGRPIGEFQLI 312
Query: 204 Q 204
Q
Sbjct: 313 Q 313
>sp|P26440|IVD_HUMAN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD
PE=1 SV=1
Length = 423
Score = 154 bits (388), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
Query: 12 HNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWV 71
H+ L + + G + QKE YLP + G +G +SEP +GSD +M A K+ +H++
Sbjct: 129 HSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYI 188
Query: 72 LNGTKSWITNGYEAKAFVCIAQADKS--KKHKGITAFIIPMDSPGLSLGKKEDKLGIRAS 129
LNG K WITNG +A + A+ D + +GITAFI+ PG S KK DKLG+R S
Sbjct: 189 LNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGS 248
Query: 130 STCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGK 189
+TC +I ED KIP ++LG E +G V ++G+D R+ +A +G+ QA D + Y
Sbjct: 249 NTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 308
Query: 190 RIAFGAPILKLQAVQ 204
R AFG I Q +Q
Sbjct: 309 REAFGQKIGHFQLMQ 323
>sp|Q5RBD5|IVD_PONAB Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD
PE=2 SV=1
Length = 423
Score = 153 bits (386), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
Query: 12 HNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWV 71
H+ L + + G + QKE YLP + G +G +SEP +GSD +M A K+ +H++
Sbjct: 129 HSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYI 188
Query: 72 LNGTKSWITNGYEAKAFVCIAQADKS--KKHKGITAFIIPMDSPGLSLGKKEDKLGIRAS 129
LNG K WITNG +A + A+ D + +GITAFI+ PG S KK DKLG+R S
Sbjct: 189 LNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGS 248
Query: 130 STCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGK 189
+TC +I ED K+P ++LG E +G V ++G+D R+ +A +G+ QA D + Y
Sbjct: 249 NTCELIFEDCKVPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHV 308
Query: 190 RIAFGAPILKLQAVQ 204
R AFG I Q +Q
Sbjct: 309 REAFGQKIGHFQLMQ 323
>sp|Q9FS87|IVD2_SOLTU Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment) OS=Solanum
tuberosum GN=IVD2 PE=1 SV=1
Length = 401
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 112/193 (58%)
Query: 12 HNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWV 71
H L + + GT +QK+ YLP + G +VG +SEP +GSD +M A + +V
Sbjct: 110 HTNLCINQLVRNGTHEQKQKYLPKLISGEHVGALAMSEPDAGSDVVSMKCKADRVEGGYV 169
Query: 72 LNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASST 131
LNG K W TNG A+ V A+ D + KGITAFII G S +K DKLG+R S T
Sbjct: 170 LNGNKMWCTNGPTAQTLVVYAKTDVTASSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDT 229
Query: 132 CNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRI 191
C ++ E+ +P ++VLG+ G+G V ++G+D R+ +AS +GI QA D + Y +R
Sbjct: 230 CELVFENCFVPEENVLGQVGKGVYVLMSGLDLERLVLASGPVGIMQACLDVVLPYVKQRE 289
Query: 192 AFGAPILKLQAVQ 204
FG PI + Q VQ
Sbjct: 290 QFGRPIGEFQFVQ 302
>sp|Q9SWG0|IVD_ARATH Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=IVD PE=1 SV=2
Length = 409
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 110/193 (56%)
Query: 12 HNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWV 71
H+ L + + GT QKE YLP + G +VG +SEP +GSD M A K ++
Sbjct: 118 HSNLCINQLVRNGTAAQKEKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKAEKVDGGYI 177
Query: 72 LNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASST 131
LNG K W TNG A+ V A+ D KGITAFII G S +K DKLG+R S T
Sbjct: 178 LNGNKMWCTNGPSAETLVVYAKTDTKAGSKGITAFIIEKGMTGFSTAQKLDKLGMRGSDT 237
Query: 132 CNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRI 191
C ++ E+ +P +++L KEG+G V ++G+D R+ +A+ +GI QA D + Y +R
Sbjct: 238 CELVFENCFVPEENILDKEGKGVYVLMSGLDLERLVLAAGPLGIMQACLDNVLPYIRQRE 297
Query: 192 AFGAPILKLQAVQ 204
FG P+ + Q +Q
Sbjct: 298 QFGRPVGEFQFIQ 310
>sp|Q9VSA3|ACADM_DROME Probable medium-chain specific acyl-CoA dehydrogenase,
mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1
SV=1
Length = 419
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC G T L +I G K+QK+ YL ++ V + ++EPG+GSD + +
Sbjct: 111 GCTGIMTALEASGLGQTPVILS-GNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIK 169
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKK---HKGITAFIIPMDSPGLSL 117
T A K+ D WV+NG K WITNG A + +A+ + K K T FI+ DSPGL+
Sbjct: 170 TRAEKKGDEWVINGQKMWITNGGVANWYFVLARTNPDPKCPPSKAFTGFIVERDSPGLTP 229
Query: 118 GKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQ 177
G+KE +G RAS T + EDV++P ++VL EG GFK+ + D R +A+ +G+AQ
Sbjct: 230 GRKELNMGQRASDTRGITFEDVRVPKENVLIGEGAGFKIAMGTFDKTRPPVAAGAVGLAQ 289
Query: 178 AAFDCAMEYAGKRIAFGAPILKLQAVQL 205
D A++YA +R FG PI QAVQ
Sbjct: 290 RCLDEALKYALERKTFGVPIAYHQAVQF 317
>sp|P63427|ACDP_MYCTU Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium
tuberculosis GN=fadE25 PE=3 SV=1
Length = 389
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Query: 6 STILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARK 65
S I V+ GLI + G+++ K+ LP+ + + +SE +GSDAA+M T A+
Sbjct: 94 SLIPAVNKLGTMGLILR-GSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKA 152
Query: 66 ESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLG 125
+ DHW+LNG K WITNG ++ + +A D + GI+AF++ D G ++G KE KLG
Sbjct: 153 DGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMVHKDDEGFTVGPKERKLG 212
Query: 126 IRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAME 185
I+ S T + E+ +IP D ++G+ G GFK L +D R + +Q +GIAQ A D A+
Sbjct: 213 IKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIA 272
Query: 186 YAGKRIAFGAPILKLQAVQL 205
Y R FG I QAVQ
Sbjct: 273 YTKDRKQFGESISTFQAVQF 292
>sp|P63428|ACDP_MYCBO Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1
Length = 389
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 1/200 (0%)
Query: 6 STILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARK 65
S I V+ GLI + G+++ K+ LP+ + + +SE +GSDAA+M T A+
Sbjct: 94 SLIPAVNKLGTMGLILR-GSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKA 152
Query: 66 ESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLG 125
+ DHW+LNG K WITNG ++ + +A D + GI+AF++ D G ++G KE KLG
Sbjct: 153 DGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMVHKDDEGFTVGPKERKLG 212
Query: 126 IRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAME 185
I+ S T + E+ +IP D ++G+ G GFK L +D R + +Q +GIAQ A D A+
Sbjct: 213 IKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIA 272
Query: 186 YAGKRIAFGAPILKLQAVQL 205
Y R FG I QAVQ
Sbjct: 273 YTKDRKQFGESISTFQAVQF 292
>sp|Q9D7B6|ACAD8_MOUSE Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus
GN=Acad8 PE=2 SV=2
Length = 413
Score = 148 bits (374), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 126/205 (61%), Gaps = 2/205 (0%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC T+ +++HN + A +I+ FG ++Q+ + P + ++EPGSGSDAA++L
Sbjct: 113 GCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLL 171
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKK 120
T+A+++ DH++LNG+K++I+ G E+ +V + + S KGI+ ++ +PGLS GKK
Sbjct: 172 TSAKQQGDHYILNGSKAFISGGGESDIYVVMCRTGGSGA-KGISCIVVEKGTPGLSFGKK 230
Query: 121 EDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAF 180
E K+G + T VI ED +P+ + +G EG+GF + + G++ RI +AS +G A A+
Sbjct: 231 EKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVASCSLGAAHASV 290
Query: 181 DCAMEYAGKRIAFGAPILKLQAVQL 205
E+ R FGAP+ + Q +Q
Sbjct: 291 ILTQEHLKVRKQFGAPLARSQYLQF 315
>sp|Q0NXR6|ACAD8_BOVIN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8
PE=2 SV=1
Length = 416
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 1 GCGGTSTILTVHN-CLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANM 59
GC T+ +++HN C++ +I++FG+++Q+ P + ++EPGSGSDAA++
Sbjct: 116 GCTSTTAYMSIHNMCVW--IIDRFGSEEQRHRLCPPLCTMEKFASYCLTEPGSGSDAASL 173
Query: 60 LTTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGK 119
+T+A ++ DH++LNG+K++I+ G EA +V + + +GI+ ++ +PGLS GK
Sbjct: 174 MTSAVRQHDHYILNGSKAFISGGGEADIYVVMCRTGGPGP-RGISCVVVEKGTPGLSFGK 232
Query: 120 KEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAA 179
KE K+G + T VI ED +P+ + +G EG+GF + + G++ RI +AS +G A A+
Sbjct: 233 KEKKVGWNSQPTQAVIFEDCAVPVANRIGDEGQGFLIAMKGLNGGRINVASCSLGAAHAS 292
Query: 180 FDCAMEYAGKRIAFGAPILKLQAVQL 205
A +Y R FG P+ Q +Q
Sbjct: 293 IVLARDYLKVRKQFGEPLANSQYLQF 318
>sp|P46703|ACDP_MYCLE Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae
(strain TN) GN=fadE25 PE=3 SV=1
Length = 389
Score = 144 bits (362), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 1/200 (0%)
Query: 6 STILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARK 65
S I V+ GLI + G+++ K+ LPS + + +SE +GSDAA+M T A+
Sbjct: 94 SLIPAVNKLGTMGLILR-GSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRAKA 152
Query: 66 ESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLG 125
+ D W+LNG K WITNG ++ + +A D K GI+AFI+ D G S+G KE KLG
Sbjct: 153 DGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISAFIVHKDDEGFSIGPKEKKLG 212
Query: 126 IRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAME 185
I+ S T + + +IP D ++G+ G GFK L +D R + +Q +GIAQ A D A+
Sbjct: 213 IKGSPTTELYFDKCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIV 272
Query: 186 YAGKRIAFGAPILKLQAVQL 205
Y R FG I Q++Q
Sbjct: 273 YTKDRKQFGESISTFQSIQF 292
>sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd PE=1
SV=1
Length = 389
Score = 144 bits (362), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 117/197 (59%), Gaps = 4/197 (2%)
Query: 9 LTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESD 68
+ V C Y I +G++ K+ Y+P +G FGI+EP +GSD M +TA + D
Sbjct: 92 MEVLGCAYT--ILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGD 149
Query: 69 HWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFII-PMDSPGLSLGKKEDKLGIR 127
HW+LNG+K+WI+N +A + A DK+ +G++AF+I P + PG+ E KLG
Sbjct: 150 HWLLNGSKTWISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKTSNLE-KLGSH 208
Query: 128 ASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYA 187
AS T + L++VK+P +++LGK G+G ++ ++ R+ A+ G+G+AQA D A++Y
Sbjct: 209 ASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYC 268
Query: 188 GKRIAFGAPILKLQAVQ 204
+R FG PI Q Q
Sbjct: 269 NERRQFGKPIGDFQMNQ 285
>sp|A8XNF0|ACAD1_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 1,
mitochondrial OS=Caenorhabditis briggsae GN=CBG15946
PE=3 SV=1
Length = 417
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 110/185 (59%), Gaps = 3/185 (1%)
Query: 24 GTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITNGY 83
G ++QK+ YL + + + ++EPG+GSD + T K+ D +++NG+K+WIT G
Sbjct: 127 GNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGG 186
Query: 84 EAKAFVCIAQADKSKKH---KGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVK 140
AK F +A++D K K TAFI+ D+PG+S GKKE +G R S T + EDV+
Sbjct: 187 HAKWFFVLARSDSDPKAPAGKAFTAFIVDGDTPGISRGKKEKNMGQRCSDTRTITFEDVR 246
Query: 141 IPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKL 200
+P ++VLG G GFKV + D R G+A+ +G+A D + +YA +R AFG I
Sbjct: 247 VPAENVLGAPGAGFKVAMGAFDMTRPGVAAGALGLAWRCLDESAKYALQRKAFGTEIANH 306
Query: 201 QAVQL 205
QAVQ
Sbjct: 307 QAVQF 311
>sp|Q9UKU7|ACAD8_HUMAN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens
GN=ACAD8 PE=1 SV=1
Length = 415
Score = 141 bits (355), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC T+ +++HN + A +I+ FG ++Q+ + P + ++EPGSGSDAA++L
Sbjct: 115 GCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLL 173
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKK 120
T+A+K+ DH++LNG+K++I+ E+ +V + + KGI+ ++ +PGLS GKK
Sbjct: 174 TSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGGPGP-KGISCIVVEKGTPGLSFGKK 232
Query: 121 EDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAF 180
E K+G + T VI ED +P+ + +G EG+GF + + G++ RI +AS +G A A+
Sbjct: 233 EKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGAAHASV 292
Query: 181 DCAMEYAGKRIAFGAPILKLQAVQL 205
++ R FG P+ Q +Q
Sbjct: 293 ILTRDHLNVRKQFGEPLASNQYLQF 317
>sp|Q9H845|ACAD9_HUMAN Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo
sapiens GN=ACAD9 PE=1 SV=1
Length = 621
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 117/209 (55%), Gaps = 8/209 (3%)
Query: 3 GGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTT 62
G + L H + I GT++QK YLP G ++ F ++EP SGSDAA++ +
Sbjct: 136 GSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSR 195
Query: 63 ARKESD--HWVLNGTKSWITNGYEAKAFVCIAQ-----ADKSKKHKGITAFIIPMDSPGL 115
A D H++LNG+K WITNG A F A+ +D S K K ITAFI+ D G+
Sbjct: 196 ATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDK-ITAFIVERDFGGV 254
Query: 116 SLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGI 175
+ GK EDKLGIR S+TC V E+ KIP++++LG+ G+GFKV + ++ R M S G+
Sbjct: 255 TNGKPEDKLGIRGSNTCEVHFENTKIPVENILGEVGDGFKVAMNILNSGRFSMGSVVAGL 314
Query: 176 AQAAFDCAMEYAGKRIAFGAPILKLQAVQ 204
+ + EYA R F + + +Q
Sbjct: 315 LKRLIEMTAEYACTRKQFNKRLSEFGLIQ 343
>sp|Q22347|ACADM_CAEEL Probable medium-chain specific acyl-CoA dehydrogenase 10,
mitochondrial OS=Caenorhabditis elegans GN=acdh-10 PE=2
SV=1
Length = 417
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 24 GTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITNGY 83
G ++QK+ YL + + + ++EPG+GSD + T K+ D +++NG+K+WIT G
Sbjct: 127 GNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGDEYIINGSKAWITGGG 186
Query: 84 EAKAFVCIAQADKSKKH---KGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVK 140
AK F +A++D + K K TAFI+ D+PG++ GKKE +G R S T + EDV+
Sbjct: 187 HAKWFFVLARSDPNPKTPAGKAFTAFIVDGDTPGITRGKKEKNMGQRCSDTRVITFEDVR 246
Query: 141 IPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKL 200
+P ++VLG G GFKV + D R G+A+ +G++ D + +YA +R AFG I
Sbjct: 247 VPAENVLGAPGAGFKVAMEAFDMTRPGVAAGALGLSWRCLDESAKYALERKAFGTVIANH 306
Query: 201 QAVQL 205
QAVQ
Sbjct: 307 QAVQF 311
>sp|A5A6I0|ACADM_PANTR Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan
troglodytes GN=ACADM PE=2 SV=1
Length = 421
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC G T + N L I G +QK+ YL + + + ++EPG+GSD A +
Sbjct: 115 GCTGVQTAIE-GNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIK 173
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQAD---KSKKHKGITAFIIPMDSPGLSL 117
T A K+ D +++NG K WITNG +A + +A++D K+ +K T FI+ D+PG+ +
Sbjct: 174 TKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQI 233
Query: 118 GKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQ 177
G+KE +G R S T ++ EDVK+P ++VL +G GFKV + D R +A+ +G+AQ
Sbjct: 234 GRKELNMGQRCSDTRGIVFEDVKVPRENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQ 293
Query: 178 AAFDCAMEYAGKRIAFGAPILKLQAVQL 205
A D A +YA +R FG +++ QA+
Sbjct: 294 RALDEATKYALERKTFGKLLVEHQAISF 321
>sp|P11310|ACADM_HUMAN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADM PE=1 SV=1
Length = 421
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC G T + N L I G +QK+ YL + + + ++EPG+GSD A +
Sbjct: 115 GCTGVQTAIE-GNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIK 173
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQAD---KSKKHKGITAFIIPMDSPGLSL 117
T A K+ D +++NG K WITNG +A + +A++D K+ +K T FI+ D+PG+ +
Sbjct: 174 TKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQI 233
Query: 118 GKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQ 177
G+KE +G R S T ++ EDVK+P ++VL +G GFKV + D R +A+ +G+AQ
Sbjct: 234 GRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKTRPVVAAGAVGLAQ 293
Query: 178 AAFDCAMEYAGKRIAFGAPILKLQAVQL 205
A D A +YA +R FG +++ QA+
Sbjct: 294 RALDEATKYALERKTFGKLLVEHQAISF 321
>sp|A8WP91|ACAD2_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 2,
mitochondrial OS=Caenorhabditis briggsae GN=CBG00953
PE=3 SV=2
Length = 408
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 111/185 (60%), Gaps = 3/185 (1%)
Query: 24 GTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITNGY 83
G ++QK+ YL + + + ++EPG+GSD + T K+ + +++NG+K+WIT G
Sbjct: 122 GNEEQKKKYLGALAAEPIIASYCVTEPGAGSDVNGVKTKCEKKGNEYIINGSKAWITGGG 181
Query: 84 EAKAFVCIAQADKSKKH---KGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVK 140
AK F +A++D + K K TAFI+ D+ G++ GKKE +G R S T + EDV+
Sbjct: 182 HAKWFFVLARSDPNPKTPAGKAFTAFIVDGDTSGITRGKKEKNMGQRCSDTRTITFEDVR 241
Query: 141 IPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKL 200
+P ++VLG G GFKV ++ D R G+A+ +G++ D + +YA +R AFG I
Sbjct: 242 VPEENVLGPPGAGFKVAMSAFDMTRPGVAAGALGLSWRCLDESAKYALQRKAFGTEIANH 301
Query: 201 QAVQL 205
QAVQ
Sbjct: 302 QAVQF 306
>sp|P41367|ACADM_PIG Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADM PE=1 SV=3
Length = 421
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC G T + + LI G +Q++ YL + + + ++EPG+GSD A +
Sbjct: 115 GCTGVQTAIEANTLGQVPLIIG-GNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIK 173
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQAD---KSKKHKGITAFIIPMDSPGLSL 117
T A K+ D +++NG K WITNG +A + +A++D K+ K T FI+ D+PG+ +
Sbjct: 174 TKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQI 233
Query: 118 GKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQ 177
G+KE +G R S T ++ EDV++P ++VL EG GFK+ + D R +A+ +G+AQ
Sbjct: 234 GRKEINMGQRCSDTRGIVFEDVRVPKENVLTGEGAGFKIAMGTFDKTRPPVAAGAVGLAQ 293
Query: 178 AAFDCAMEYAGKRIAFGAPILKLQAVQL 205
A D A +YA +R FG + + Q +
Sbjct: 294 RALDEATKYALERKTFGKLLAEHQGISF 321
>sp|Q8HXY8|ACADM_MACFA Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADM PE=2 SV=1
Length = 421
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC G T + N L I G ++QK+ YL + + + ++EPG+GSD A +
Sbjct: 115 GCTGVQTAIE-GNSLGQMPIIIAGNEQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIK 173
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQAD---KSKKHKGITAFIIPMDSPGLSL 117
T A K+ D +++NG K WITNG +A + +A++D K+ +K T FI+ D+PG+ +
Sbjct: 174 TKAEKKGDEYIINGQKMWITNGGKASWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQI 233
Query: 118 GKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQ 177
G+KE +G R S T ++ EDVK+ ++VL +G GFK+ + D R ++S +G+AQ
Sbjct: 234 GRKELNMGQRCSDTRGIVFEDVKVLKENVLIGDGAGFKIAMGAFDKTRPTVSSGAVGLAQ 293
Query: 178 AAFDCAMEYAGKRIAFGAPILKLQAVQL 205
A D A +YA +R FG +++ QA+
Sbjct: 294 RALDEATKYALERKTFGKLLIEHQAISF 321
>sp|Q3SZB4|ACADM_BOVIN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADM PE=2 SV=1
Length = 421
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 118/208 (56%), Gaps = 4/208 (1%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC G T + N L + G +Q++ YL + + + ++EP +GSD A +
Sbjct: 115 GCTGVQTAIEA-NSLGQMPVIIAGNDQQQKKYLGRMTEEPLMCAYCVTEPVAGSDVAGIK 173
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQAD---KSKKHKGITAFIIPMDSPGLSL 117
T A K+ D +++NG K WITNG +A + +A++D K+ K T FI+ D+PG+ +
Sbjct: 174 TKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQI 233
Query: 118 GKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQ 177
G+KE +G R S T ++ EDV++P ++VL EG GFK+ + D R +A+ +G+AQ
Sbjct: 234 GRKELNMGQRCSDTRGIVFEDVRVPKENVLIGEGAGFKIAMGAFDKTRPPVAAAAVGLAQ 293
Query: 178 AAFDCAMEYAGKRIAFGAPILKLQAVQL 205
A D A +YA +R FG +++ Q +
Sbjct: 294 RALDEATKYALERKTFGKLLIEHQGISF 321
>sp|P45952|ACADM_MOUSE Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadm PE=1 SV=1
Length = 421
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC G T + N L + G +QK+ YL + + + ++EP +GSD A +
Sbjct: 115 GCTGVQTAIEA-NSLGQMPVILAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAAIK 173
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKK---HKGITAFIIPMDSPGLSL 117
T A K+ D +V+NG K WITNG +A + +A+++ K K T FI+ D+PG+ +
Sbjct: 174 TKAEKKGDEYVINGQKMWITNGGKANWYFLLARSNPDPKVPASKAFTGFIVEADTPGIHI 233
Query: 118 GKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQ 177
GKKE +G R S T + EDV++P ++VL EG GFK+ + D R +A+ +G+AQ
Sbjct: 234 GKKELNMGQRCSDTRGIAFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQ 293
Query: 178 AAFDCAMEYAGKRIAFGAPILKLQAVQL 205
A D A +YA R FG +++ Q V
Sbjct: 294 RALDEATKYALDRKTFGKLLVEHQGVSF 321
>sp|Q8JZN5|ACAD9_MOUSE Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus
musculus GN=Acad9 PE=2 SV=2
Length = 625
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 109/188 (57%), Gaps = 8/188 (4%)
Query: 24 GTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESD--HWVLNGTKSWITN 81
G ++QK YLP G ++ F ++EP SGSDAA++ T A D +++LNG+K WITN
Sbjct: 161 GNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITN 220
Query: 82 GYEAKAFVCIAQ-----ADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVIL 136
G A F A+ +D SK K +TAFI+ D G++ GK EDKLGIR S+TC V
Sbjct: 221 GGLANIFTVFAKTEVVDSDGSKTDK-MTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHF 279
Query: 137 EDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAP 196
E+ ++P+++VLG+ G GFKV + ++ R M S G+ + + EYA R F
Sbjct: 280 ENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAGMLKKLIELTAEYACTRKQFNRN 339
Query: 197 ILKLQAVQ 204
+ + +Q
Sbjct: 340 LSEFGLIQ 347
>sp|P08503|ACADM_RAT Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadm PE=1 SV=1
Length = 421
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANML 60
GC G T + N L + G +QK+ YL + + + ++EP +GSD A +
Sbjct: 115 GCTGVQTAIEA-NSLGQMPVIIAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAGIK 173
Query: 61 TTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKK---HKGITAFIIPMDSPGLSL 117
T A K+ D +V+NG K WITNG +A + + +++ K K T FI+ D+PG+ +
Sbjct: 174 TKAEKKGDEYVINGQKMWITNGGKANWYFVLTRSNPDPKVPASKAFTGFIVEADTPGIHI 233
Query: 118 GKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQ 177
GKKE +G R S T + EDV++P ++VL EG GFK+ + D R +A+ +G+AQ
Sbjct: 234 GKKELNMGQRCSDTRGITFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQ 293
Query: 178 AAFDCAMEYAGKRIAFGAPILKLQAVQL 205
A D A +YA R FG +++ Q V
Sbjct: 294 RALDEATKYALDRKTFGKLLVEHQGVSF 321
>sp|Q8HXY7|ACADV_MACFA Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADVL PE=2 SV=1
Length = 655
Score = 127 bits (318), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 23 FGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKES--DHWVLNGTKSWIT 80
FGTK QKE YLP G + F ++EP SGSDAA++ T+A ++ LNG+K WI+
Sbjct: 192 FGTKAQKEKYLPKLASGETLAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWIS 251
Query: 81 NGYEAKAFVCIAQADKSKKHKG-----ITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVI 135
NG A F A+ + G ITAF++ G++ G E K+GI+AS+T V+
Sbjct: 252 NGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGPPEKKMGIKASNTAEVL 311
Query: 136 LEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGA 195
+ V++P ++VLG+ G GFKV + ++ R GMA+ G + A++YA RI FG
Sbjct: 312 FDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIITKAVDYATNRIQFGE 371
Query: 196 PILKLQAVQ 204
I +Q
Sbjct: 372 KIHNFGLIQ 380
>sp|O32176|FADE_BACSU Probable acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168)
GN=fadE PE=2 SV=1
Length = 594
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 101/177 (57%), Gaps = 6/177 (3%)
Query: 23 FGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTA--RKESDHWVLNGTKSWIT 80
FG+++QK+ YLP G + + ++EPGSGSDA TTA + H+VL G K WIT
Sbjct: 126 FGSEEQKKKYLPGLASGEKIAAYALTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWIT 185
Query: 81 NGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVK 140
N A FV A+ D K +AFI+ + PG+S G +E K+GI+ SST +IL+ +
Sbjct: 186 NSAFADVFVVYAKVDGDK----FSAFIVEKEFPGVSTGPEEKKMGIKGSSTRTLILDQAE 241
Query: 141 IPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPI 197
+P +++LG+ G+G + ++ R +A IG ++ + + YA +R F PI
Sbjct: 242 VPKENLLGEIGKGHVIAFNILNIGRYKLAVGTIGASKRVIELSAAYANQRRQFKTPI 298
>sp|P49748|ACADV_HUMAN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADVL PE=1 SV=1
Length = 655
Score = 124 bits (310), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 109/208 (52%), Gaps = 7/208 (3%)
Query: 4 GTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTA 63
G L H + I FGTK QKE YLP G V F ++EP SGSDAA++ T+A
Sbjct: 173 GVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSA 232
Query: 64 RKES--DHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKG-----ITAFIIPMDSPGLS 116
++ LNG+K WI+NG A F A+ + G ITAF++ G++
Sbjct: 233 VPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGIT 292
Query: 117 LGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIA 176
G E K+GI+AS+T V + V++P ++VLG+ G GFKV + ++ R GMA+ G
Sbjct: 293 HGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTM 352
Query: 177 QAAFDCAMEYAGKRIAFGAPILKLQAVQ 204
+ A+++A R FG I +Q
Sbjct: 353 RGIIAKAVDHATNRTQFGEKIHNFGLIQ 380
>sp|P48818|ACADV_BOVIN Very long-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADVL PE=2 SV=3
Length = 655
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 110/208 (52%), Gaps = 7/208 (3%)
Query: 4 GTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTA 63
G +L H + I FGTK QKE YLP G + F ++EP SGSDAA++ ++A
Sbjct: 173 GVGIVLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETIAAFCLTEPSSGSDAASIRSSA 232
Query: 64 RKES--DHWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKG-----ITAFIIPMDSPGLS 116
++ LNG+K WI+NG A F A+ + G ITAF++ G++
Sbjct: 233 VPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPVTDTATGAVKEKITAFVVERSFGGVT 292
Query: 117 LGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIA 176
G E K+GI+AS+T V + V++P ++VLG+ G GFKV + ++ R GMA+ G
Sbjct: 293 HGPPEKKMGIKASNTAEVYFDGVRVPAENVLGEVGGGFKVAMHILNNGRFGMAAALAGTM 352
Query: 177 QAAFDCAMEYAGKRIAFGAPILKLQAVQ 204
+ A+++A R FG I +Q
Sbjct: 353 KGIIAKAVDHAANRTQFGEKIHNFGLIQ 380
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,277,719
Number of Sequences: 539616
Number of extensions: 3387319
Number of successful extensions: 7966
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 7650
Number of HSP's gapped (non-prelim): 181
length of query: 206
length of database: 191,569,459
effective HSP length: 112
effective length of query: 94
effective length of database: 131,132,467
effective search space: 12326451898
effective search space used: 12326451898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)