Query psy1303
Match_columns 206
No_of_seqs 118 out of 1217
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 17:35:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1303.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1303hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d29_A Acyl-COA dehydrogenase; 100.0 2.4E-45 8.1E-50 304.8 21.2 205 2-206 82-290 (387)
2 2vig_A Short-chain specific ac 100.0 2.7E-45 9.4E-50 304.9 20.8 205 2-206 81-285 (391)
3 1ukw_A Acyl-COA dehydrogenase; 100.0 1.5E-45 5.3E-50 305.2 18.9 204 2-206 80-283 (379)
4 1buc_A Butyryl-COA dehydrogena 100.0 2.4E-45 8.3E-50 304.4 19.8 205 2-206 83-288 (383)
5 3r7k_A Probable acyl COA dehyd 100.0 2.5E-45 8.5E-50 306.2 19.8 204 2-206 105-308 (403)
6 3pfd_A Acyl-COA dehydrogenase; 100.0 1.4E-45 4.9E-50 306.7 18.3 205 1-206 93-297 (393)
7 3p4t_A Putative acyl-COA dehyd 100.0 4.6E-45 1.6E-49 304.6 20.3 205 1-206 100-305 (403)
8 3nf4_A Acyl-COA dehydrogenase; 100.0 9.2E-45 3.1E-49 301.3 20.5 203 1-206 90-292 (387)
9 2jif_A Short/branched chain sp 100.0 7.5E-45 2.6E-49 303.4 19.5 205 1-206 103-307 (404)
10 2dvl_A Acyl-COA dehydrogenase; 100.0 1.4E-44 4.8E-49 298.8 20.9 200 2-206 78-277 (372)
11 2pg0_A Acyl-COA dehydrogenase; 100.0 9.7E-45 3.3E-49 301.0 19.9 203 2-206 85-290 (385)
12 1ivh_A Isovaleryl-COA dehydrog 100.0 5.8E-45 2E-49 303.2 18.5 205 2-206 90-296 (394)
13 1egd_A Medium chain acyl-COA d 100.0 1.3E-44 4.5E-49 301.2 20.5 204 2-206 91-297 (396)
14 3sf6_A Glutaryl-COA dehydrogen 100.0 1.7E-44 5.7E-49 301.2 19.5 199 2-206 105-303 (403)
15 3swo_A Glutaryl-COA dehydrogen 100.0 3E-44 1E-48 299.3 19.5 199 2-206 100-298 (399)
16 1rx0_A Acyl-COA dehydrogenase 100.0 4.9E-44 1.7E-48 297.5 20.7 204 1-206 93-296 (393)
17 3ii9_A Glutaryl-COA dehydrogen 100.0 1.6E-44 5.5E-49 300.7 17.0 204 1-206 93-296 (396)
18 1r2j_A Protein FKBI; polyketid 100.0 1.9E-44 6.6E-49 297.4 17.2 199 2-206 68-267 (366)
19 2ix5_A Acyl-coenzyme A oxidase 100.0 1.4E-43 4.8E-48 298.1 20.8 201 2-206 129-329 (436)
20 3mpi_A Glutaryl-COA dehydrogen 100.0 4.5E-44 1.5E-48 298.1 16.5 203 2-206 83-287 (397)
21 4hr3_A Putative acyl-COA dehyd 100.0 2.3E-43 8E-48 295.3 20.5 190 17-206 118-313 (415)
22 2eba_A Putative glutaryl-COA d 100.0 2.1E-43 7.2E-48 293.0 19.8 200 2-206 86-286 (385)
23 2z1q_A Acyl-COA dehydrogenase; 100.0 2.5E-43 8.5E-48 305.6 20.8 202 1-206 102-305 (577)
24 1siq_A GCD, glutaryl-COA dehyd 100.0 7.8E-43 2.7E-47 290.2 19.8 201 1-206 87-289 (392)
25 3owa_A Acyl-COA dehydrogenase; 100.0 8.7E-43 3E-47 302.6 20.0 199 4-206 110-310 (597)
26 2wbi_A Acyl-COA dehydrogenase 100.0 8.5E-43 2.9E-47 292.9 18.6 192 15-206 122-321 (428)
27 2uxw_A VERY-long-chain specifi 100.0 2.2E-42 7.4E-47 300.8 18.0 205 2-206 123-334 (607)
28 2c12_A Nitroalkane oxidase; ox 100.0 1.9E-41 6.6E-46 285.6 18.1 205 1-206 86-319 (439)
29 3mkh_A Nitroalkane oxidase; ox 100.0 3.9E-41 1.3E-45 283.6 15.8 203 2-206 89-316 (438)
30 2ddh_A Acyl-COA oxidase; beta 100.0 2.2E-39 7.4E-44 284.2 16.6 204 3-206 94-330 (661)
31 1w07_A Acyl-COA oxidase; oxido 100.0 2.9E-39 1E-43 283.5 14.6 203 2-206 94-333 (659)
32 3djl_A Protein AIDB; alpha hel 100.0 1.6E-37 5.4E-42 266.7 17.2 193 3-206 129-340 (541)
33 3mxl_A Nitrososynthase; flavin 100.0 1.4E-37 4.6E-42 258.7 10.1 196 1-206 83-285 (395)
34 3m9v_A FAD-dependent oxidoredu 100.0 1.4E-36 4.8E-41 255.9 14.0 195 2-206 95-296 (439)
35 2rfq_A 3-HSA hydroxylase, oxyg 100.0 5.8E-37 2E-41 254.9 11.1 190 1-206 78-282 (394)
36 2or0_A Hydroxylase; APC7385, r 100.0 5.8E-37 2E-41 256.5 10.7 189 2-206 92-297 (414)
37 2jbr_A P-hydroxyphenylacetate 100.0 5.3E-37 1.8E-41 257.3 9.9 189 2-206 107-310 (422)
38 1u8v_A Gamma-aminobutyrate met 100.0 8.3E-31 2.8E-35 222.7 15.7 183 18-206 118-329 (490)
39 2yyk_A 4-hydroxyphenylacetate- 100.0 1.5E-30 5.3E-35 220.7 15.5 175 25-206 122-321 (481)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 3.2E-28 1.1E-32 206.9 14.9 176 23-206 127-325 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 99.9 6.9E-22 2.4E-26 168.2 14.7 175 27-206 134-326 (517)
No 1
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=2.4e-45 Score=304.84 Aligned_cols=205 Identities=43% Similarity=0.714 Sum_probs=192.0
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+.+|..++...|..+|+++|+++|++++++|+.++++++|||+.|||+..+.+++++++|||+|||+|.|+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 161 (387)
T 2d29_A 82 DGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQ 161 (387)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred ChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCC
Confidence 67888888888546788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCC----CCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHH
Q psy1303 82 GYEAKAFVCIAQADKSK----KHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVG 157 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~----~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~ 157 (206)
+.+||+++|.+++++++ ++.++++|+||++.||+++.++|+++|+++++++++.|+||+||++++++.++.|+...
T Consensus 162 ~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~ 241 (387)
T 2d29_A 162 GSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDV 241 (387)
T ss_dssp TTTCSEEEEEEECSCCSCGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHH
T ss_pred CCcCCEEEEEEEeCCccccCCCCCCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHH
Confidence 99999999999986432 45579999999999999999999999999999999999999999999999999999888
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 158 LTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 158 ~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
...+...|+.+++.++|+++++++.+++|+++|++||+||++||.||++
T Consensus 242 ~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~ 290 (387)
T 2d29_A 242 LRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEGVSFK 290 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCcchHhhHHHHHH
Confidence 8889999999999999999999999999999999999999999999874
No 2
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=2.7e-45 Score=304.86 Aligned_cols=205 Identities=56% Similarity=0.989 Sum_probs=192.4
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+.+|..++...|..+|+++|+++|++++++|+.++++++|||+.|+|+..+++++++++|||+|||+|.|+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 160 (391)
T 2vig_A 81 CASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITN 160 (391)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecC
Confidence 67888888888536778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHhh
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGI 161 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~ 161 (206)
+.+||+++|.+++++++++.++++|+||++.||+++.+.|+++|+++++++++.|+||+||++++++.++.|+......+
T Consensus 161 ~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l 240 (391)
T 2vig_A 161 AWEASAAVVFASTDRALQNKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTL 240 (391)
T ss_dssp TTTCSEEEEEEECCSSSTTSCEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHH
T ss_pred CCcCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHH
Confidence 99999999999986544456789999999999999999999999999999999999999999999999999998888889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 162 DCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 162 ~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
...|+..++.++|+++++++.+++|+++|++||+||+++|.+|++
T Consensus 241 ~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~ 285 (391)
T 2vig_A 241 DMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFK 285 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHH
Confidence 999999999999999999999999999999999999999999874
No 3
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.5e-45 Score=305.22 Aligned_cols=204 Identities=41% Similarity=0.684 Sum_probs=192.0
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+.+|. ++...|..+|+++||++|++++++|+.++++++|||+.|+|+..+.+++++++|||+|||+|.|+||
T Consensus 80 ~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 158 (379)
T 1ukw_A 80 CMGIYTIPMASD-LGITPVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISN 158 (379)
T ss_dssp CHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred CchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccC
Confidence 677888888886 7888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHhh
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGI 161 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~ 161 (206)
+.+||+++|.+++++++++.++++|+||++.||+++.+.|+++|+++++++++.||||+||+++++|.++.|+......+
T Consensus 159 ~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l 238 (379)
T 1ukw_A 159 GGEAEWVVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTL 238 (379)
T ss_dssp TTTEEEEEEEEESCGGGGGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHH
T ss_pred CCcCCEEEEEEEcCCCCCCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHH
Confidence 99999999999986444456889999999999999999999999999999999999999999999999999998888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 162 DCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 162 ~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
...|+..++.++|+++++++.+++|+++|++||+||.++|.+|++
T Consensus 239 ~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~~i~~~q~vq~~ 283 (379)
T 1ukw_A 239 NKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFK 283 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHH
Confidence 999999999999999999999999999999999999999999874
No 4
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.4e-45 Score=304.38 Aligned_cols=205 Identities=43% Similarity=0.767 Sum_probs=192.5
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEe-CCEEEEeeeeeeee
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKE-SDHWVLNGTKSWIT 80 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~-~~g~~l~G~k~~v~ 80 (206)
|+++++++.+|..++...|..+|+++|+++|++++++|+.++++++|||+.|||+..++++++++ +|||+|||+|.|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s 162 (383)
T 1buc_A 83 DAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFIT 162 (383)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE
T ss_pred ChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccC
Confidence 67888888888647788899999999999999999999999999999999999999999999999 99999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHh
Q psy1303 81 NGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTG 160 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~ 160 (206)
|+.+||+++|.++++++++++++++|+||++.||+++.++|+++|+++++++++.|+||+||++++++.++.++......
T Consensus 163 ~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~ 242 (383)
T 1buc_A 163 NGGAADIYIVFAMTDKSKGNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMT 242 (383)
T ss_dssp TTTTCSEEEEEEESCSSSSTTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHH
T ss_pred CCCcCCEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHH
Confidence 99999999999998654456689999999999999998899999999999999999999999999999999999888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 161 IDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 161 ~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+...|+..++.++|+++++++.+++|+++|++||+||.+||.+|++
T Consensus 243 l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~~i~~~q~vq~~ 288 (383)
T 1buc_A 243 LDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQSISFK 288 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHH
Confidence 8999999999999999999999999999999999999999999864
No 5
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=2.5e-45 Score=306.21 Aligned_cols=204 Identities=29% Similarity=0.497 Sum_probs=193.2
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+.+|..++...|..+|+++|+++|++++++|++++++++|||+.|+|+..+++++++++|||+|||+|.|+|+
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~ 184 (403)
T 3r7k_A 105 GSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITS 184 (403)
T ss_dssp CCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEET
T ss_pred CchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEcccC
Confidence 78888888766547888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHhh
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGI 161 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~ 161 (206)
+.+||+++|.++++++ +..++++|+||++.||+++.++|+++|+++++++++.||||+||++++++.+++|+......+
T Consensus 185 a~~Ad~~~v~a~~~~~-~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l 263 (403)
T 3r7k_A 185 GVRADFVTTAVRTGGP-GYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQF 263 (403)
T ss_dssp TTTCSEEEEEEECSSS-SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTH
T ss_pred CccCCEEEEEEEcCCC-CCCceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHH
Confidence 9999999999998654 566899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 162 DCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 162 ~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
...|+.+++.++|+++++++.+++|+++|++||+||.+||.||++
T Consensus 264 ~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~ 308 (403)
T 3r7k_A 264 QAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRHK 308 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCCchhhcHHHHHH
Confidence 999999999999999999999999999999999999999999874
No 6
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.4e-45 Score=306.73 Aligned_cols=205 Identities=37% Similarity=0.615 Sum_probs=193.8
Q ss_pred CCCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeee
Q psy1303 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWIT 80 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~ 80 (206)
+|+++++++..|. ++...|..+|+++||++|++++.+|+.++++++|||+.|+|+..+++++++++|||+|||+|.|+|
T Consensus 93 ~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s 171 (393)
T 3pfd_A 93 VDCSASLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWIT 171 (393)
T ss_dssp TCHHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred hCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEec
Confidence 4778888888887 777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHh
Q psy1303 81 NGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTG 160 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~ 160 (206)
|+.+||+++|.++++++++..++++|+||++.||+++.++|+++|+++++++++.||||+||++++++.++.|+......
T Consensus 172 ~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~ 251 (393)
T 3pfd_A 172 NGGKSTWYTVMAVTDPDKGANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALAT 251 (393)
T ss_dssp TTTTCSEEEEEEESCGGGGGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHH
T ss_pred CCcccCEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHHHH
Confidence 99999999999998755556789999999999999999999999999999999999999999999999999999998899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 161 IDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 161 ~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+...|+.+++.++|+++++++.+++|+++|++||+||.+||.||++
T Consensus 252 l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~ 297 (393)
T 3pfd_A 252 LDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFM 297 (393)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999874
No 7
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=4.6e-45 Score=304.62 Aligned_cols=205 Identities=29% Similarity=0.496 Sum_probs=193.5
Q ss_pred CCCcc-hhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeee
Q psy1303 1 GCGGT-STILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWI 79 (206)
Q Consensus 1 ~~~s~-a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v 79 (206)
+|+++ ++.+..|..++...|..+|+++|+++|++++++|+.++++++|||+.|+|+..+++++++++|||+|||+|.|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~v 179 (403)
T 3p4t_A 100 AGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKTYI 179 (403)
T ss_dssp TTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEE
T ss_pred hCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEEEe
Confidence 46777 78888887577788999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHH
Q psy1303 80 TNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLT 159 (206)
Q Consensus 80 ~~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~ 159 (206)
|++..||+++|.++++++ +.+++++|+||++.||+++.++|+++|+++++++++.||||+||++++++.+++|+.....
T Consensus 180 s~a~~Ad~~~v~a~~~~~-~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~ 258 (403)
T 3p4t_A 180 TSGVRADYVVTAARTGGP-GAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAA 258 (403)
T ss_dssp ETTTTCSEEEEEEECSSS-SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHH
T ss_pred cCCcccCEEEEEEEeCCC-CCCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHHHH
Confidence 999999999999998654 5678999999999999999999999999999999999999999999999999999999889
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 160 GIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 160 ~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
.+...|+.+++.++|+++++++.+++|+++|++||+||++||.||++
T Consensus 259 ~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~pi~~~q~vq~~ 305 (403)
T 3p4t_A 259 AFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQNT 305 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcccccHHHHHH
Confidence 99999999999999999999999999999999999999999999874
No 8
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=9.2e-45 Score=301.29 Aligned_cols=203 Identities=35% Similarity=0.693 Sum_probs=185.5
Q ss_pred CCCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeee
Q psy1303 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWIT 80 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~ 80 (206)
+|+++++.+..|. ++...|..+|+++|+++|++++++|+.++++++|||+.|+|+..+++++++++|||+|||+|.|+|
T Consensus 90 ~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s 168 (387)
T 3nf4_A 90 RWASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWIT 168 (387)
T ss_dssp TCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred hCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEeccc
Confidence 4788899999988 888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHh
Q psy1303 81 NGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTG 160 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~ 160 (206)
++.+||+++|.++++ ++.+++.+|+||++.||+++.+.|+++|+++++++++.|+||+||++++++.++.|+......
T Consensus 169 ~~~~Ad~~~v~a~~~--~~~~g~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~ 246 (387)
T 3nf4_A 169 HGGKADFYTLFARTG--EGSRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSA 246 (387)
T ss_dssp TTTTCSEEEEEEECC----CCCEEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHT
T ss_pred CCcccCEEEEEEEeC--CCCCceEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHH
Confidence 999999999999986 245678999999999999999999999999999999999999999999999999999998899
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 161 IDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 161 ~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+...|+.+++.++|+++++++.+++|+++|++||+|+.+||.+|++
T Consensus 247 l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~v~~~ 292 (387)
T 3nf4_A 247 LDSGRLGIAAVATGLAQAALDEAVAYANERTAFGRKIIDHQGLGFL 292 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CTTTC-CHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCCchhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999874
No 9
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=7.5e-45 Score=303.38 Aligned_cols=205 Identities=41% Similarity=0.717 Sum_probs=190.9
Q ss_pred CCCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeee
Q psy1303 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWIT 80 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~ 80 (206)
+|+++++.+.+|..++..+|..+|+++||++|++++.+|+ ++++++|||+.|+|+..+.+++++++|+|+|||+|.|+|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is 181 (404)
T 2jif_A 103 VDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWIS 181 (404)
T ss_dssp TCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEeec
Confidence 4778888888887567788999999999999999999986 789999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHh
Q psy1303 81 NGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTG 160 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~ 160 (206)
|+..||+++|.++++++++..++++|+||++.||+++.+.|+++|+++++++++.||||+||+++++|.++.|+......
T Consensus 182 ~a~~Ad~~~v~ar~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~ 261 (404)
T 2jif_A 182 SAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGS 261 (404)
T ss_dssp TTTTCSEEEEEEESCGGGGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHH
T ss_pred CCcccCEEEEEEEeCCCCCCCceEEEEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHHHH
Confidence 99999999999998644445678999999999999999999999999999999999999999999999999999888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 161 IDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 161 ~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+...|+.+++.++|+++++++.+++|+++|++||+||.+||.||++
T Consensus 262 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~ 307 (404)
T 2jif_A 262 LNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQ 307 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHH
Confidence 8999999999999999999999999999999999999999999864
No 10
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-44 Score=298.80 Aligned_cols=200 Identities=39% Similarity=0.696 Sum_probs=189.3
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+.+|..++...|..+|+++|+++|++++++|+.++++++|||+.|||+..+++++++++|||+|||+|.|+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 157 (372)
T 2dvl_A 78 DPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITS 157 (372)
T ss_dssp CHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred CcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecC
Confidence 67788888888546778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHhh
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGI 161 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~ 161 (206)
+.+||+++|.+++++ ++.+|+||++.||+++.+.|+++|+++++++++.||||+||++++++.++.|+......+
T Consensus 158 ~~~Ad~~~v~a~~~~-----g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l 232 (372)
T 2dvl_A 158 AGHAHLYVVMARTEK-----GISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGL 232 (372)
T ss_dssp TTTCSEEEEEEEETT-----EEEEEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHH
T ss_pred CCcCCEEEEEEEeCC-----CcEEEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHH
Confidence 999999999999753 688999999999999999999999999999999999999999999999999998888889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 162 DCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 162 ~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
...|+..++.++|+++++++.+++|+++|++||+||.+||.+|++
T Consensus 233 ~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~ 277 (372)
T 2dvl_A 233 DSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFK 277 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHH
Confidence 999999999999999999999999999999999999999999874
No 11
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=9.7e-45 Score=300.99 Aligned_cols=203 Identities=33% Similarity=0.590 Sum_probs=188.7
Q ss_pred C-CcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeee
Q psy1303 2 C-GGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWIT 80 (206)
Q Consensus 2 ~-~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~ 80 (206)
| +++++.+ |..++...|..+|+++|+++|++++++|+.++++++|||+.|||+..+.+++++++|||+|||+|.|+|
T Consensus 85 ~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s 162 (385)
T 2pg0_A 85 GSSLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFIT 162 (385)
T ss_dssp CGGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEET
T ss_pred CCchHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEeccc
Confidence 5 6777665 654677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCC--CCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHH
Q psy1303 81 NGYEAKAFVCIAQADKS--KKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGL 158 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~--~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~ 158 (206)
++.+||+++|.++++++ +++.++++|+||++.||+++.++|+++|+++++++++.|+||+||++++++.+++|+....
T Consensus 163 ~~~~Ad~~~v~a~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~ 242 (385)
T 2pg0_A 163 NGIHADLIVVACKTDPQAKPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLM 242 (385)
T ss_dssp TTTTCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHH
T ss_pred CCcccCEEEEEEEeCCccCCCCCceEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHH
Confidence 99999999999998643 3455789999999999999988999999999999999999999999999999999998888
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 159 TGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 159 ~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
..+...|+.+++.++|+++++++.+++|+++|++||+||+++|.+|++
T Consensus 243 ~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~ 290 (385)
T 2pg0_A 243 EKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTVQFR 290 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCccchhHHHHHH
Confidence 888999999999999999999999999999999999999999999874
No 12
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.8e-45 Score=303.17 Aligned_cols=205 Identities=39% Similarity=0.663 Sum_probs=192.4
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+.+|..++...|..+|+++|+++|++++++|++++++++|||+.|+|+..+.+++++++|||+|||+|.|+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~ 169 (394)
T 1ivh_A 90 SGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITN 169 (394)
T ss_dssp CHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEET
T ss_pred chhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCC
Confidence 67888888888656788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCC--CCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHH
Q psy1303 82 GYEAKAFVCIAQADKS--KKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLT 159 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~--~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~ 159 (206)
+.+||+++|.++++++ +++.++++|+||++.||+++.+.|+++|+++++++++.|+||+||++++++.++.|+.....
T Consensus 170 ~~~Ad~~~v~ar~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~ 249 (394)
T 1ivh_A 170 GPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMS 249 (394)
T ss_dssp GGGCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHH
T ss_pred CCcCCEEEEEEEeCCcccCCCCCeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHH
Confidence 9999999999998643 34467899999999999999999999999999999999999999999999999999988888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 160 GIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 160 ~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
.+...|+..++.++|+++++++.+++|+++|++||+||++||.+|++
T Consensus 250 ~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~ 296 (394)
T 1ivh_A 250 GLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGK 296 (394)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhccHHHHHH
Confidence 89999999999999999999999999999999999999999999874
No 13
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=1.3e-44 Score=301.23 Aligned_cols=204 Identities=37% Similarity=0.617 Sum_probs=189.3
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+ +|..++...|..+|+++|+++||+++++|+.++++++|||+.|+|+..++++|++++|||+|||+|.|+||
T Consensus 91 ~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 169 (396)
T 1egd_A 91 CTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITN 169 (396)
T ss_dssp CHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEET
T ss_pred CccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccC
Confidence 67777776 66646667788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCC---CceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHH
Q psy1303 82 GYEAKAFVCIAQADKSKKH---KGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGL 158 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~---~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~ 158 (206)
+.+||+++|.++++++++. .++++|+||++.||+++.++|+++|+++++++++.||||+||+++++|.++.|+....
T Consensus 170 ~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~ 249 (396)
T 1egd_A 170 GGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAM 249 (396)
T ss_dssp TTTCSEEEEEEECCCCTTSCGGGTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHH
T ss_pred CcccCEEEEEEEeCCCCCCCCCCCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHH
Confidence 9999999999998654333 6788999999999999999999999999999999999999999999999999998888
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 159 TGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 159 ~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
..+...|+.+++.++|+++++++.+++|+++|++||+||+++|.||++
T Consensus 250 ~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~ 297 (396)
T 1egd_A 250 GAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFM 297 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHH
Confidence 889999999999999999999999999999999999999999999864
No 14
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.7e-44 Score=301.21 Aligned_cols=199 Identities=35% Similarity=0.650 Sum_probs=189.2
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++++.+|..++...|..+|+++|+++|++++++|+.++++++|||+.|+|+..++++|++++|||+|||+|.|+|+
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~ 184 (403)
T 3sf6_A 105 DSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITN 184 (403)
T ss_dssp CHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred cccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEeecC
Confidence 67888888888756788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHhh
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGI 161 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~ 161 (206)
+..||+++|.++++ +++++|+||++.||+++.+.|+++|+++++++++.|+||+||++++++. ++|+......+
T Consensus 185 a~~Ad~~~v~ar~~-----~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l 258 (403)
T 3sf6_A 185 GSVADVAVVWARTD-----EGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPG-ATSLGAPLRCL 258 (403)
T ss_dssp GGGCSEEEEEEEET-----TEEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHH
T ss_pred CcccCEEEEEEEeC-----CceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCC-ChhHHHHHHHH
Confidence 99999999999985 3689999999999999999999999999999999999999999999998 88998888999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 162 DCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 162 ~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
...|+.+++.++|+++++++.+++|+++|++||+|++++|.||++
T Consensus 259 ~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~pi~~~q~vq~~ 303 (403)
T 3sf6_A 259 NEARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQK 303 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCcchhhHHHHHH
Confidence 999999999999999999999999999999999999999999874
No 15
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=3e-44 Score=299.32 Aligned_cols=199 Identities=35% Similarity=0.658 Sum_probs=188.9
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+.+|..++...|..+|+++|+++|++++++|+.++++++|||+.|+|+..+.++|++++|||+|||+|.|+|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~ 179 (399)
T 3swo_A 100 DSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITN 179 (399)
T ss_dssp CHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred CccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEeECC
Confidence 67788888888657788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHhh
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGI 161 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~ 161 (206)
+.+||+++|.++++ +++.+|+||++.||+++.+.|+++|+++++++++.|+||+||++++++. ++|+......+
T Consensus 180 a~~Ad~~~v~a~~~-----~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l 253 (399)
T 3swo_A 180 GNLADVATVWAQTD-----DGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPL-AEGLSAPLSCL 253 (399)
T ss_dssp TTTCSEEEEEEBCT-----TSCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTT-CCSTHHHHHHH
T ss_pred CCccCEEEEEEEeC-----CceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCC-ChhHHHHHHHH
Confidence 99999999999975 3588999999999999999999999999999999999999999999998 88998888999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 162 DCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 162 ~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
...|+..++.++|+++++++.+++|+++|++||+||+++|.+|++
T Consensus 254 ~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~~i~~~q~vq~~ 298 (399)
T 3swo_A 254 NEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEK 298 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhCHHHHHH
Confidence 999999999999999999999999999999999999999999874
No 16
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4.9e-44 Score=297.50 Aligned_cols=204 Identities=35% Similarity=0.670 Sum_probs=191.2
Q ss_pred CCCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeee
Q psy1303 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWIT 80 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~ 80 (206)
+|+++++.+..|. ++..+|..+|+++||++|++++++|+.++++++|||+.|+|+..+.++|++++|||+|||+|.|+|
T Consensus 93 ~~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is 171 (393)
T 1rx0_A 93 GCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFIS 171 (393)
T ss_dssp TCHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEE
T ss_pred hCcchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeec
Confidence 4678888888887 778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHh
Q psy1303 81 NGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTG 160 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~ 160 (206)
|+.+||+++|.+++++ +++.++++|+||++.||+++.+.|+++|+++++++.+.||||+||++++++.++.|+......
T Consensus 172 ~a~~Ad~~~v~a~~~~-~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~ 250 (393)
T 1rx0_A 172 GAGESDIYVVMCRTGG-PGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRG 250 (393)
T ss_dssp TTTTCSEEEEEEESSS-SSGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHH
T ss_pred CCccCCEEEEEEEcCC-CCCCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHH
Confidence 9999999999999754 345688999999999999999999999999999999999999999999999999999888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 161 IDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 161 ~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+...|+.+++.++|+++++++.+++|+++|++||+||+++|.||++
T Consensus 251 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~ 296 (393)
T 1rx0_A 251 LNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFT 296 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHH
Confidence 8889999999999999999999999999999999999999999874
No 17
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=1.6e-44 Score=300.71 Aligned_cols=204 Identities=34% Similarity=0.575 Sum_probs=184.4
Q ss_pred CCCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeee
Q psy1303 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWIT 80 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~ 80 (206)
+|+++++.+.+|..++...|..+|+++|+++|++++++|+.++++++|||+.|+|+..+.+++++++|||+|||+|.|+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs 172 (396)
T 3ii9_A 93 VDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWIT 172 (396)
T ss_dssp TCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEEEEE
T ss_pred hChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeEC
Confidence 46788888888875667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHh
Q psy1303 81 NGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTG 160 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~ 160 (206)
++.+||+++|.+++++ ++.+++++|+||++.||+++.+.|+++|+++++++++.|+||+||++++++. ++|+......
T Consensus 173 ~a~~Ad~~~v~a~~~~-~g~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~-~~g~~~~~~~ 250 (396)
T 3ii9_A 173 NSPIADVFVVWAKLDE-DGRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPH-VKGLRGPFTC 250 (396)
T ss_dssp TGGGCSEEEEEEEEEE-TTEEEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHH
T ss_pred CCccCCEEEEEEEecC-CCCCceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCC-ChHHHHHHHH
Confidence 9999999999999862 2345689999999999999999999999999999999999999999999976 7889888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 161 IDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 161 ~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+...|+.+++.++|+++++++.+++|+++|++||+|+++||.||++
T Consensus 251 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~ 296 (396)
T 3ii9_A 251 LNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKK 296 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCCchhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999874
No 18
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.9e-44 Score=297.37 Aligned_cols=199 Identities=25% Similarity=0.411 Sum_probs=185.1
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+.+|..++...|. +|+++||++|++++++|+ +.++++|||+.|+|+..+.+++++++|||+|||+|.|+|+
T Consensus 68 ~~~~~~~~~~~~~~~~~~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~ 145 (366)
T 1r2j_A 68 CSSLRSVMTSQGMAAWTVQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTA 145 (366)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETT
T ss_pred ChHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccC
Confidence 67888888888546677788 999999999999999999 9999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHH-HHh
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVG-LTG 160 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~-~~~ 160 (206)
+.+||+++|.+++++ +++++|+||++.||+++.+.|+++|+++++++++.|+||+||++++++.+++|+... ...
T Consensus 146 ~~~Ad~~~v~a~~~~----~g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~ 221 (366)
T 1r2j_A 146 AAYADHLVVFGLQED----GSGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAAS 221 (366)
T ss_dssp TTTCSEEEEEEBCSS----SCCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHH
T ss_pred CcccCEEEEEEEeCC----CceEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHH
Confidence 999999999998753 278899999999999999999999999999999999999999999999988898777 778
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 161 IDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 161 ~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+...|+..++.++|+++++++.+++|+++|++||+||++||.+|++
T Consensus 222 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~ 267 (366)
T 1r2j_A 222 LAYGRKSVAWGCVGILRACRTAAVAHARTREQFGRPLGDHQLVAGH 267 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCchhhhHHHHHH
Confidence 8899999999999999999999999999999999999999999874
No 19
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=1.4e-43 Score=298.10 Aligned_cols=201 Identities=33% Similarity=0.523 Sum_probs=186.8
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+.+|..++...|..+|+++||++|++++++|+.++++++|||+.|||+..++++|++++|||+|||+|.|+||
T Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~ 208 (436)
T 2ix5_A 129 DASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGN 208 (436)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEET
T ss_pred CccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCC
Confidence 66777777778656778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHhh
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGI 161 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~ 161 (206)
+.+||+++|.++++++ .++.+|+||++.||+++.+.|+++|+++++++++.|+||+||++++++.. .++......+
T Consensus 209 a~~Ad~~lv~Ar~~~~---~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~-~g~~~~~~~l 284 (436)
T 2ix5_A 209 STFADLLIIFARNTTT---NQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGV-NSFQDTSKVL 284 (436)
T ss_dssp TTTCSEEEEEEEETTT---SSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTC-SSHHHHHHHH
T ss_pred CcccCEEEEEEEECCC---CcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCcc-ccHHHHHHHH
Confidence 9999999999998632 36889999999999999999999999999999999999999999999865 5788888889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 162 DCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 162 ~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
...|+.+++.++|+++++++.+++|+++|+|||+||++||.||++
T Consensus 285 ~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~ 329 (436)
T 2ix5_A 285 AVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQK 329 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhcHHHHHH
Confidence 999999999999999999999999999999999999999999874
No 20
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=4.5e-44 Score=298.08 Aligned_cols=203 Identities=35% Similarity=0.664 Sum_probs=191.5
Q ss_pred CCcchhhhhhhhhhhHH-HHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeee
Q psy1303 2 CGGTSTILTVHNCLYAG-LINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWIT 80 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~-~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~ 80 (206)
|+++++.+.+|. ++.. .|..+|+++|+++|++++++|+.++++++|||+.|+|+..+.+++++++|||+|||+|.|+|
T Consensus 83 ~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s 161 (397)
T 3mpi_A 83 SSALRVQLNMEV-LGCAYTILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWIS 161 (397)
T ss_dssp CHHHHHHHHHHT-TTTHHHHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEE
T ss_pred CchHHHHHHHHH-HhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeC
Confidence 677888888886 6666 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCCCceEEEEe-ecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHH
Q psy1303 81 NGYEAKAFVCIAQADKSKKHKGITAFII-PMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLT 159 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~~~~~~~~~~lv-p~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~ 159 (206)
|+.+||+++|.++++++++..++.+|+| |++.||+++ ++|+++|+++++++++.||||+||++++++.++.++.....
T Consensus 162 ~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~ 240 (397)
T 3mpi_A 162 NAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFG 240 (397)
T ss_dssp TTTTCSSEEEEEESCGGGGGGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHH
T ss_pred CCcccCEEEEEEEcCCCCCCCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHH
Confidence 9999999999999875445668899999 999999999 99999999999999999999999999999999999998888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 160 GIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 160 ~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
.+...|+..++.++|+++++++.+++|+++|++||+|++++|.+|++
T Consensus 241 ~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~ 287 (397)
T 3mpi_A 241 SLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGDFQMNQDM 287 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999863
No 21
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=2.3e-43 Score=295.29 Aligned_cols=190 Identities=27% Similarity=0.507 Sum_probs=180.1
Q ss_pred HHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCC-CCCCccCceeEEEEeCCEEEEeeeeeeeeCCCC--CCEEEEEEE
Q psy1303 17 AGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPG-SGSDAANMLTTARKESDHWVLNGTKSWITNGYE--AKAFVCIAQ 93 (206)
Q Consensus 17 ~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~-~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~~~~--a~~~~v~a~ 93 (206)
..+|..+|+++||++||+++++|+.++++++|||+ .|+|+..++|+|++++|||+|||+|.|+||+.+ ||+++|.++
T Consensus 118 ~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~ 197 (415)
T 4hr3_A 118 MEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGL 197 (415)
T ss_dssp HHHHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEE
T ss_pred HHHHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhCeeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEE
Confidence 46789999999999999999999999999999999 999999999999999999999999999999966 999999999
Q ss_pred eCCC-CCCCceEEEEeecCCCCeeeccccccCCCCCCc--eeeEEEeceeeCCCCccCCCCccHHHHHHhhhhHHHHHHH
Q psy1303 94 ADKS-KKHKGITAFIIPMDSPGLSLGKKEDKLGIRASS--TCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARIGMAS 170 (206)
Q Consensus 94 ~~~~-~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~--~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~~~~~~~~aa 170 (206)
++++ ++.+++++|+||++.||+++.++|+++|+++++ ++++.|+||+||++++|+.+++|+......+...|+.+++
T Consensus 198 ~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa 277 (415)
T 4hr3_A 198 TDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAM 277 (415)
T ss_dssp CCTTSCTTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCEEEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHH
T ss_pred eCCCCCCCCceEEEEEEcCCCceEecCCCCccccCCCCCCeeEEEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHH
Confidence 8753 355789999999999999999999999999987 9999999999999999999999999989999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 171 QGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 171 ~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
.++|+++++++.+++|+++|++||+||+++|.||++
T Consensus 278 ~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~ 313 (415)
T 4hr3_A 278 RLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRER 313 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEETTEEGGGSTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCccCCCcHHHhHHHHHH
Confidence 999999999999999999999999999999999874
No 22
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-43 Score=292.97 Aligned_cols=200 Identities=38% Similarity=0.661 Sum_probs=184.0
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCc-cCceeEEEEeCCEEEEeeeeeeee
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDA-ANMLTTARKESDHWVLNGTKSWIT 80 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~-~~~~~~a~~~~~g~~l~G~k~~v~ 80 (206)
|+++++.+.+|..++...|..+|+++||++|++++++|+.++++++|||+.|+|+ ..+++++++++|||+|||+|.|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s 165 (385)
T 2eba_A 86 DSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWIT 165 (385)
T ss_dssp CHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEE
T ss_pred CchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeeeccC
Confidence 6788888888875667888999999999999999999999999999999999999 889999999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHh
Q psy1303 81 NGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTG 160 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~ 160 (206)
|+.+||+++|.+++++ + .+++|+||++.||+++.+.|+++|+++++++++.|+||+||+++++ ..++|+......
T Consensus 166 ~~~~Ad~~~v~a~~~~--g--~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~~~~~~~ 240 (385)
T 2eba_A 166 NGNLAHLAVIWAKDEG--G--EVLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRL-PKALGLKAPLSC 240 (385)
T ss_dssp TTTTCSEEEEEEECC-------EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBC-TTCCSTHHHHHH
T ss_pred CCcccCEEEEEEEeCC--C--cEEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHcc-CCCchHHHHHHH
Confidence 9999999999999752 2 2889999999999999999999999999999999999999999999 678888888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 161 IDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 161 ~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+...|+.+++.++|+++++++.+++|+++|++||+||++||.||++
T Consensus 241 l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~ 286 (385)
T 2eba_A 241 LTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAKKQLVQAK 286 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCeeHHhCHHHHHH
Confidence 8899999999999999999999999999999999999999999874
No 23
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.5e-43 Score=305.61 Aligned_cols=202 Identities=39% Similarity=0.679 Sum_probs=190.0
Q ss_pred CCCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEE--eCCEEEEeeeeee
Q psy1303 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARK--ESDHWVLNGTKSW 78 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~--~~~g~~l~G~k~~ 78 (206)
.|+++++.+..|..++..+|..+|+++||++|||++++|++++++++|||++|||+..++|+|++ ++++|+|||+|.|
T Consensus 102 ~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~ 181 (577)
T 2z1q_A 102 GSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQW 181 (577)
T ss_dssp TSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEE
T ss_pred hcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeC
Confidence 37889999998875667789999999999999999999999999999999999999999999998 4568999999999
Q ss_pred eeCCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHH
Q psy1303 79 ITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGL 158 (206)
Q Consensus 79 v~~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~ 158 (206)
+||+..||+++|++++++ .++++|+||++.||+++.+.|+++|+++++++.+.|+||+||.+++||..+.|+....
T Consensus 182 it~a~~Ad~~~V~Ar~~g----~gis~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~ 257 (577)
T 2z1q_A 182 ISNAGFAHLFTVFAKVDG----EHFTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAF 257 (577)
T ss_dssp EETTTTCSEEEEEEEETT----TEEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHH
T ss_pred CCCCCccCEEEEEEEeCC----CeeEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHH
Confidence 999999999999999853 5789999999999999999999999999999999999999999999999999999888
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 159 TGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 159 ~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
..+...|+.+++.++|+++++++.+++|+++|+|||+||++||.||++
T Consensus 258 ~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~pi~~~q~vq~~ 305 (577)
T 2z1q_A 258 NVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQQK 305 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSSBGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHH
Confidence 999999999999999999999999999999999999999999999874
No 24
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=7.8e-43 Score=290.16 Aligned_cols=201 Identities=32% Similarity=0.551 Sum_probs=184.8
Q ss_pred CCCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEe--CCEEEEeeeeee
Q psy1303 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKE--SDHWVLNGTKSW 78 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~--~~g~~l~G~k~~ 78 (206)
+|+++++.+.+|..++...|..+|+++|+++|++++++|+.++++++|||+.|+|+..++++|+++ +|||+|||+|.|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~ 166 (392)
T 1siq_A 87 VDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTW 166 (392)
T ss_dssp TCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEE
T ss_pred hCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEe
Confidence 367777777777655677888999999999999999999999999999999999999999999999 999999999999
Q ss_pred eeCCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHH
Q psy1303 79 ITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGL 158 (206)
Q Consensus 79 v~~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~ 158 (206)
+||+..||+++|.+++++ .++.+|+||++.||+++.+.|+++|+++++++++.||||+||++++++.. .|+....
T Consensus 167 vs~~~~Ad~~~v~a~~~~----g~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~-~g~~~~~ 241 (392)
T 1siq_A 167 ITNSPMADLFVVWARCED----GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGA-SSLGGPF 241 (392)
T ss_dssp EETGGGCSEEEEEEEETT----SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTC-CSSHHHH
T ss_pred ecCCcccCEEEEEEEECC----CCEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcc-cCHHHHH
Confidence 999999999999999853 24789999999999999999999999999999999999999999999865 5777777
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 159 TGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 159 ~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
..+...|+.+++.++|+++++++.+++|+++|++||+|++++|.||++
T Consensus 242 ~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~ 289 (392)
T 1siq_A 242 GCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKK 289 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhhHHHHHH
Confidence 788889999999999999999999999999999999999999999874
No 25
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=8.7e-43 Score=302.59 Aligned_cols=199 Identities=35% Similarity=0.580 Sum_probs=184.5
Q ss_pred cchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEe--CCEEEEeeeeeeeeC
Q psy1303 4 GTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKE--SDHWVLNGTKSWITN 81 (206)
Q Consensus 4 s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~--~~g~~l~G~k~~v~~ 81 (206)
+.+..+..|..++...|..+|+++|+++|||++++|++++++++|||+.|||+..++|+|+++ +++|+|||+|.|+||
T Consensus 110 ~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~ 189 (597)
T 3owa_A 110 GFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITN 189 (597)
T ss_dssp HHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEET
T ss_pred hHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCC
Confidence 344555666656666788999999999999999999999999999999999999999999985 556999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccHHHHHHhh
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGFKVGLTGI 161 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~ 161 (206)
+.+||+++|+|++++ +++++|+||++.||+++.+.|+++|+++++++++.|+||+||+++++|..+.|+......+
T Consensus 190 a~~Ad~~lV~Art~~----~g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l 265 (597)
T 3owa_A 190 SAFADVFIVYAKIDG----EHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNIL 265 (597)
T ss_dssp TTTCSEEEEEEEETT----TEEEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHH
T ss_pred CccCCEEEEEEEeCC----CceEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhh
Confidence 999999999999864 4789999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 162 DCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 162 ~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+..|+.+++.++|+++++++.+++|+++|+|||+||++||.||++
T Consensus 266 ~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~ 310 (597)
T 3owa_A 266 NIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEK 310 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCccccccHHHHHH
Confidence 999999999999999999999999999999999999999999874
No 26
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-43 Score=292.93 Aligned_cols=192 Identities=23% Similarity=0.485 Sum_probs=179.3
Q ss_pred hhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCC-CCCCccCceeEEEEeCCEEEEeeeeeeeeCCCC--CCEEEEE
Q psy1303 15 LYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPG-SGSDAANMLTTARKESDHWVLNGTKSWITNGYE--AKAFVCI 91 (206)
Q Consensus 15 ~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~-~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~~~~--a~~~~v~ 91 (206)
.+..+|..+|+++|+++|++++++|+.++++++|||+ .|||+..+.++|++++|||+|||+|.|+||+.+ ||+++|.
T Consensus 122 ~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~ 201 (428)
T 2wbi_A 122 GNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVL 201 (428)
T ss_dssp HHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEE
T ss_pred hHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEEEEeCCEEEEEeEEeccCCCCCCcCCEEEEE
Confidence 4567888999999999999999999999999999999 999999999999999999999999999999988 9999999
Q ss_pred EEeCCC--CCCCceEEEEeecCCCCeeeccccccCCCCCCc---eeeEEEeceeeCCCCccCCCCccHHHHHHhhhhHHH
Q psy1303 92 AQADKS--KKHKGITAFIIPMDSPGLSLGKKEDKLGIRASS---TCNVILEDVKIPLDSVLGKEGEGFKVGLTGIDCARI 166 (206)
Q Consensus 92 a~~~~~--~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~---~~~v~f~~v~vp~~~~l~~~~~~~~~~~~~~~~~~~ 166 (206)
++++++ ++..++++|+||++.||+++.++|+++|+++++ ++++.|+||+||++++|+.++.|+......+...|+
T Consensus 202 art~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g~~~~~~~l~~~r~ 281 (428)
T 2wbi_A 202 GRTQNTSLSRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGRI 281 (428)
T ss_dssp EECCCTTSCGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCHHHHHHHHHHHHHH
T ss_pred EEeCCccCCCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEeCceEECHHHhcCCccchHHHHHHHHHhHHH
Confidence 998643 234578999999999999999999999999995 999999999999999999999999888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 167 GMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 167 ~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
.+++.++|+++++++.+++|+++|++||+|++++|.||++
T Consensus 282 ~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~ 321 (428)
T 2wbi_A 282 HHCMRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHW 321 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcccCCChhhhHHHHHH
Confidence 9999999999999999999999999999999999999874
No 27
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=2.2e-42 Score=300.76 Aligned_cols=205 Identities=36% Similarity=0.559 Sum_probs=189.6
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEe--CCEEEEeeeeeee
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKE--SDHWVLNGTKSWI 79 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~--~~g~~l~G~k~~v 79 (206)
|+++++.+..|..++..+|..+|+++||++|+|++++|+.++++++|||+.|||+..+.|+|+++ +++|+|||+|.|+
T Consensus 123 ~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~i 202 (607)
T 2uxw_A 123 DLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWI 202 (607)
T ss_dssp CHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEee
Confidence 67888888888645578899999999999999999999999999999999999999999999986 4489999999999
Q ss_pred eCCCCCCEEEEEEEeCCC-CC----CCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCCCccH
Q psy1303 80 TNGYEAKAFVCIAQADKS-KK----HKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKEGEGF 154 (206)
Q Consensus 80 ~~~~~a~~~~v~a~~~~~-~~----~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~~~~~ 154 (206)
|++..+|+++|+|++++. ++ .+++++|+||++.|||++.+.|+++|+++++++.+.|+||+||.+++||.++.|+
T Consensus 203 s~~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~ 282 (607)
T 2uxw_A 203 SNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGF 282 (607)
T ss_dssp ETTTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHH
T ss_pred cCCcccCEEEEEEEecCCCcccCCCCCceEEEEEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCCchH
Confidence 999999999999998531 11 3578999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 155 KVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 155 ~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
..+...++..|+..++.++|+++++++.+++|+++|+|||+||++||.||++
T Consensus 283 ~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~~~vq~~ 334 (607)
T 2uxw_A 283 KVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEK 334 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchhhcHHHHHH
Confidence 9988999999999999999999999999999999999999999999999863
No 28
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=1.9e-41 Score=285.57 Aligned_cols=205 Identities=20% Similarity=0.274 Sum_probs=187.2
Q ss_pred CCCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHh--cCCeeeEEEeeCCCCCC-----CccCceeEEEEeCCEEEEe
Q psy1303 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFV--DGTNVGCFGISEPGSGS-----DAANMLTTARKESDHWVLN 73 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~--~g~~~~~~a~te~~~g~-----~~~~~~~~a~~~~~g~~l~ 73 (206)
+|+++++.+.+|. ++...|..+|+++|+++|+++++ +|+.++++++|||+.|+ |+..+.++|++++|||+||
T Consensus 86 ~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~ln 164 (439)
T 2c12_A 86 VEPATSITIVATA-LGLMPVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVIS 164 (439)
T ss_dssp TCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEEEEE
T ss_pred hChHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEcCCEEEEE
Confidence 4889999888886 77778999999999999999999 69999999999999887 5777889999999999999
Q ss_pred eeeeeeeCCC-----CCCEEEEEEEe-C----CC----CCCCceEEEEeecCCC------CeeeccccccCCCCCCceee
Q psy1303 74 GTKSWITNGY-----EAKAFVCIAQA-D----KS----KKHKGITAFIIPMDSP------GLSLGKKEDKLGIRASSTCN 133 (206)
Q Consensus 74 G~k~~v~~~~-----~a~~~~v~a~~-~----~~----~~~~~~~~~lvp~~~~------gv~~~~~~~~~g~~~~~~~~ 133 (206)
|+|.|+||+. .||+++|.+++ + ++ ++..++++|+||++.| |+++.+.|+++|++++++++
T Consensus 165 G~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~~ 244 (439)
T 2c12_A 165 GEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPH 244 (439)
T ss_dssp EEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTCCCCE
T ss_pred eEEEeecCCCccccccCcEEEEEEEcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccccCCCCceE
Confidence 9999999997 89999999998 5 32 2345789999999998 78888999999999999999
Q ss_pred EEEeceeeCCCCccCCCCccHH-HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhh-hcccCccccccccccCC
Q psy1303 134 VILEDVKIPLDSVLGKEGEGFK-VGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGK-RIAFGAPILKLQAVQLP 206 (206)
Q Consensus 134 v~f~~v~vp~~~~l~~~~~~~~-~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~-R~~~g~~l~~~~~iq~~ 206 (206)
+.|+||+||++++|+.++.|+. .....+...|+.+++.++|+++++++.+++|+++ |.+||+||+++|.||++
T Consensus 245 v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~~ 319 (439)
T 2c12_A 245 TRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADK 319 (439)
T ss_dssp EEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHHH
T ss_pred EEEccEEecHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHHHHHH
Confidence 9999999999999999899998 8888899999999999999999999999999996 78999999999999874
No 29
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=3.9e-41 Score=283.63 Aligned_cols=203 Identities=25% Similarity=0.398 Sum_probs=184.9
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcC--CeeeEEEeeCCCCCC-----CccCceeEEEEeCCEEEEee
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDG--TNVGCFGISEPGSGS-----DAANMLTTARKESDHWVLNG 74 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g--~~~~~~a~te~~~g~-----~~~~~~~~a~~~~~g~~l~G 74 (206)
|+++++.+..|. ++...|..+|+++ +++||+++++| +.++++++|||+.|+ |+..++++|++++|||+|||
T Consensus 89 ~~~~~~~~~~~~-~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG 166 (438)
T 3mkh_A 89 EPSAALTIFATG-LGLTPINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLEGDEWVING 166 (438)
T ss_dssp CHHHHHHHHHHH-HHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEETTEEEEEE
T ss_pred ChhHHHHHHHhh-HHHHHHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEeCCEEEEEe
Confidence 677888777776 7777888899999 89999999986 589999999999888 58889999999999999999
Q ss_pred eeeeeeCCC-----CCCEEEEEEEeCC------CCCCCceEEEEeecCC-----CC-eeeccccccCCCCCCceeeEEEe
Q psy1303 75 TKSWITNGY-----EAKAFVCIAQADK------SKKHKGITAFIIPMDS-----PG-LSLGKKEDKLGIRASSTCNVILE 137 (206)
Q Consensus 75 ~k~~v~~~~-----~a~~~~v~a~~~~------~~~~~~~~~~lvp~~~-----~g-v~~~~~~~~~g~~~~~~~~v~f~ 137 (206)
+|.|+||+. .||+++|.+++++ .++..++++|+||++. || +++.+.|+++|+++++++++.|+
T Consensus 167 ~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v~fd 246 (438)
T 3mkh_A 167 EKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYT 246 (438)
T ss_dssp EECSCTTTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTCCCCEEEEE
T ss_pred EEEEecCCCccccccCcEEEEEEEecCcccCcccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcCCCceEEEEC
Confidence 999999997 8999999999853 1234578999999875 88 99999999999999999999999
Q ss_pred ceeeCCCCccCCCCccHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccC-ccccccccccCC
Q psy1303 138 DVKIPLDSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFG-APILKLQAVQLP 206 (206)
Q Consensus 138 ~v~vp~~~~l~~~~~~~~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g-~~l~~~~~iq~~ 206 (206)
||+||++++||.++.|+..+...+...|+.+++.++|+++++++.+++|+++|++|| +||++||.||++
T Consensus 247 dv~VP~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~ 316 (438)
T 3mkh_A 247 NVRVPTKNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQAFADL 316 (438)
T ss_dssp EEEEEGGGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHH
T ss_pred cEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHHHHHH
Confidence 999999999999999999988999999999999999999999999999999999999 999999999864
No 30
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=2.2e-39 Score=284.16 Aligned_cols=204 Identities=22% Similarity=0.328 Sum_probs=178.2
Q ss_pred CcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEe--CCEEEEe-----ee
Q psy1303 3 GGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKE--SDHWVLN-----GT 75 (206)
Q Consensus 3 ~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~--~~g~~l~-----G~ 75 (206)
++++..+.+|..++...|..+|+++|+++||+++++|++++|+++|||++|||+..++|+|+++ +|+|+|| |+
T Consensus 94 ~~~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~~~G~ 173 (661)
T 2ddh_A 94 RGHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSI 173 (661)
T ss_dssp TTCCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSSTTS
T ss_pred cchhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCCCCeE
Confidence 3456667888767889999999999999999999999999999999999999999999999998 7899999 99
Q ss_pred eeeeeC-CCCCCEEEEEEEeCCCCCCCceEEEEeec-C------CCCeeeccccccCCCCCCceeeEEEeceeeCCCCcc
Q psy1303 76 KSWITN-GYEAKAFVCIAQADKSKKHKGITAFIIPM-D------SPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVL 147 (206)
Q Consensus 76 k~~v~~-~~~a~~~~v~a~~~~~~~~~~~~~~lvp~-~------~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l 147 (206)
|+|++| +.+||+++|+|++++++++.++.+|+||. + .|||++.+.|+++|+++++++.+.|+||+||.+++|
T Consensus 174 K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~~~v~Fd~VrVP~~~lL 253 (661)
T 2ddh_A 174 KWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPRENML 253 (661)
T ss_dssp EECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEESSEEEEGGGBC
T ss_pred EEecCCCcccCCEEEEEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCcccccCCCCcceEEEeccEEECHHHhc
Confidence 999999 78999999999986443456889999994 4 799999999999999999999999999999999999
Q ss_pred CCC------Ccc-----HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCc-------cccccccccCC
Q psy1303 148 GKE------GEG-----FKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGA-------PILKLQAVQLP 206 (206)
Q Consensus 148 ~~~------~~~-----~~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~-------~l~~~~~iq~~ 206 (206)
+.. +.+ +......+...|+.+++.++|+++++++.+++|+++|+|||+ ||.++|.+|++
T Consensus 254 g~~~~v~~~G~~~~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~~i~~~q~vq~r 330 (661)
T 2ddh_A 254 MKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYK 330 (661)
T ss_dssp CSSCEECTTCCEECCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSSTTSCCCBGGGSHHHHHH
T ss_pred CcccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCCCCccccccccHHHHHH
Confidence 874 322 556667778899999999999999999999999999999998 89999999864
No 31
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=2.9e-39 Score=283.53 Aligned_cols=203 Identities=24% Similarity=0.382 Sum_probs=181.2
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEe--CCEEEEe-----e
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKE--SDHWVLN-----G 74 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~--~~g~~l~-----G 74 (206)
|++++ +.+|..++...|..+|+++|+++|++++++|++++|+++|||++|+|+..++|+|+++ +|+|+|| |
T Consensus 94 ~~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G 171 (659)
T 1w07_A 94 DQPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTA 171 (659)
T ss_dssp CCCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGG
T ss_pred ccchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCe
Confidence 34554 7778657888999999999999999999999999999999999999999999999998 6899999 9
Q ss_pred eeeeeeC-CCCCCEEEEEEEeCCCCCCCceEEEEeec-C------CCCeeeccccccCC---CCCCceeeEEEeceeeCC
Q psy1303 75 TKSWITN-GYEAKAFVCIAQADKSKKHKGITAFIIPM-D------SPGLSLGKKEDKLG---IRASSTCNVILEDVKIPL 143 (206)
Q Consensus 75 ~k~~v~~-~~~a~~~~v~a~~~~~~~~~~~~~~lvp~-~------~~gv~~~~~~~~~g---~~~~~~~~v~f~~v~vp~ 143 (206)
+|.|+++ +..||+++|+|++++++++.++.+|+||. + .|||++.+.|+++| +++++++.+.|+||+||.
T Consensus 172 ~K~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~ 251 (659)
T 1w07_A 172 SKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPR 251 (659)
T ss_dssp SEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEG
T ss_pred EEEeecCCCCCCCEEEEEEEECCCCCCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECH
Confidence 9999999 89999999999986544445789999995 5 69999999999999 999999999999999999
Q ss_pred CCccCC------CCccH------HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCc-------ccccccccc
Q psy1303 144 DSVLGK------EGEGF------KVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGA-------PILKLQAVQ 204 (206)
Q Consensus 144 ~~~l~~------~~~~~------~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~-------~l~~~~~iq 204 (206)
+++|+. .+.++ ......+...|+.+++.++|+++++++.+++|+++|+|||+ |+.+||.+|
T Consensus 252 ~~lLg~~~~v~~~g~~~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq 331 (659)
T 1w07_A 252 DQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQ 331 (659)
T ss_dssp GGBCCSSEEECTTCCEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHHHH
T ss_pred HHhcCCcCccCCCCceecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHHHH
Confidence 999985 45443 23456678999999999999999999999999999999998 899999998
Q ss_pred CC
Q psy1303 205 LP 206 (206)
Q Consensus 205 ~~ 206 (206)
++
T Consensus 332 ~r 333 (659)
T 1w07_A 332 NR 333 (659)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 32
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=1.6e-37 Score=266.74 Aligned_cols=193 Identities=24% Similarity=0.361 Sum_probs=177.9
Q ss_pred CcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCe-------------eeEEEeeCCCCCCCccCceeEEEEe-CC
Q psy1303 3 GGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTN-------------VGCFGISEPGSGSDAANMLTTARKE-SD 68 (206)
Q Consensus 3 ~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~-------------~~~~a~te~~~g~~~~~~~~~a~~~-~~ 68 (206)
++.+....+|. .++..|..++ ++|+++|++++.+|+. +.++++|||++|||+..++|+|+++ +|
T Consensus 129 ~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~sge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g 206 (541)
T 3djl_A 129 AGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDG 206 (541)
T ss_dssp STTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHTCSCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTS
T ss_pred HhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHhCCCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCC
Confidence 34444455677 6777888889 9999999999999998 7899999999999999999999999 78
Q ss_pred EEEEeeeeeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEeecCCC-----CeeeccccccCCCCCCceeeEEEeceeeCC
Q psy1303 69 HWVLNGTKSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSP-----GLSLGKKEDKLGIRASSTCNVILEDVKIPL 143 (206)
Q Consensus 69 g~~l~G~k~~v~~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~-----gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~ 143 (206)
+|+|||+|+|+| +.++|+++|+|+++ +++++|+||++.| ||++.+.|+++|+++++++++.|+||+
T Consensus 207 ~y~LnG~K~f~S-a~~Ad~~lVlArt~-----~Gis~flVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~--- 277 (541)
T 3djl_A 207 SYRLVGHKWFFS-VPQSDAHLVLAQTA-----GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI--- 277 (541)
T ss_dssp CEEEEEEEEEEE-CTTSSEEEEEEEET-----TEEEEEEEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---
T ss_pred eEEEEEEEEeec-ccccCEEEEEEEEC-----CceEEEEEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---
Confidence 899999999999 89999999999985 4899999999998 999999999999999999999999995
Q ss_pred CCccCCCCccHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 144 DSVLGKEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+++||.++.|+..+..++...|+..++.++|+++++++.+++|+++|++||+|+.++|.+|++
T Consensus 278 ~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~p~vq~~ 340 (541)
T 3djl_A 278 GWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHV 340 (541)
T ss_dssp EEEESSTTCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred eeeeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCCchhhCHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999999999863
No 33
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=1.4e-37 Score=258.69 Aligned_cols=196 Identities=23% Similarity=0.271 Sum_probs=167.4
Q ss_pred CCCcchhhhhhhhhhhHHHH--hccCCHHHH---HhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeee
Q psy1303 1 GCGGTSTILTVHNCLYAGLI--NKFGTKKQK---ETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGT 75 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l--~~~g~~~q~---~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~ 75 (206)
+|+++++.+.+|...+..++ ..+|+++|| ++|++++.+|+.++++++|||+.+. ...+ ++++|||+|||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~---t~~~~g~~lnG~ 157 (395)
T 3mxl_A 83 ADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELH---SDGAGGWLLSGR 157 (395)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEE---ECSSSCEEEEEE
T ss_pred hCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceE---EecCCEEEEeeE
Confidence 47788888888864444443 467999999 9999999999999999999998652 2222 237889999999
Q ss_pred eeeeeCCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccC--CCCcc
Q psy1303 76 KSWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLG--KEGEG 153 (206)
Q Consensus 76 k~~v~~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~--~~~~~ 153 (206)
|.|+||+.+||+++|.++++++++.+++++|+||++.||+++.+.|+++|+++++++++.|+||+||++++++ ..+.+
T Consensus 158 K~~is~a~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g 237 (395)
T 3mxl_A 158 KVLVSMAPIATHFFVHAQRRDDDGSVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPVGAR 237 (395)
T ss_dssp EEEETTGGGCSEECCCEEEECTTSCEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCC
T ss_pred EEEecCccccCEEEEEEEeCCCCCCCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCcc
Confidence 9999999999999999998765556678999999999999999999999999999999999999999999998 66666
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 154 FKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 154 ~~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
+......+...|+.+++.++|+++++++.+++|++ |+|+.++|.+|++
T Consensus 238 ~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~~~q~vq~~ 285 (395)
T 3mxl_A 238 RDAVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GRGGEPRAGARAL 285 (395)
T ss_dssp CTTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TTCSCCCHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCCCHHHHHH
Confidence 65554445668999999999999999999999998 6689999999864
No 34
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=1.4e-36 Score=255.90 Aligned_cols=195 Identities=25% Similarity=0.357 Sum_probs=162.9
Q ss_pred CCcchhhhhhhhhhhHHH--HhccCCHHH---HHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeee
Q psy1303 2 CGGTSTILTVHNCLYAGL--INKFGTKKQ---KETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTK 76 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~--l~~~g~~~q---~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k 76 (206)
|+++++++.+|......+ +.++|+++| |++||+++.+|+.++++++|||+.+ ...+. ++++|||+|||+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~---t~~~~g~vlnG~K 169 (439)
T 3m9v_A 95 DASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLR---PDGAGGWLLSGRK 169 (439)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEE---ECSSSCEEEEEEE
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCcee---eccCCEEEEEeEE
Confidence 677888888886444443 457799999 9999999999999999999999753 32222 2378899999999
Q ss_pred eeeeCCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccC--CCCccH
Q psy1303 77 SWITNGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLG--KEGEGF 154 (206)
Q Consensus 77 ~~v~~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~--~~~~~~ 154 (206)
.|+||+.+||+++|.++++++++..++++|+||++.||+++.+.|+++|+++++++++.|+||+||++++|+ ..+.++
T Consensus 170 ~~~s~a~~Ad~~~v~art~~~~~~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~ 249 (439)
T 3m9v_A 170 TLVSMAPVGTHFVINARTDGTDGPPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARN 249 (439)
T ss_dssp EEETTGGGCSEEEECEEECC--CCCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCC
T ss_pred EeecCccccCEEEEEEEecCCCCCceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchH
Confidence 999999999999999999765556789999999999999999999999999999999999999999999998 666665
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 155 KVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 155 ~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
......+..+|+..++.++|+++++++.+++|++ ++|+.++|.+|++
T Consensus 250 ~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~~~~~vq~~ 296 (439)
T 3m9v_A 250 DAVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE-----RRPEPPQAAALTL 296 (439)
T ss_dssp GGGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TCSSCCCHHHHHH
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCCCCHHHHHH
Confidence 4443335558899999999999999999999998 5689999998863
No 35
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=5.8e-37 Score=254.88 Aligned_cols=190 Identities=18% Similarity=0.263 Sum_probs=166.1
Q ss_pred CCCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeee
Q psy1303 1 GCGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWIT 80 (206)
Q Consensus 1 ~~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~ 80 (206)
+|+++++++.+|. ++..+|..+|+++|+++|++ +|+.+.+++++ | .+++++++|||+|||+|.|+|
T Consensus 78 ~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is 143 (394)
T 2rfq_A 78 ACGSTGWVSSIIG-VHNWHLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSS 143 (394)
T ss_dssp TCHHHHHHHHHHH-HHHHHHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEET
T ss_pred hChhHHHHHHHHH-HHHHHHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccC
Confidence 4788888888887 78888999999999999998 68888999887 3 478999999999999999999
Q ss_pred CCCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCC--------CC-
Q psy1303 81 NGYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGK--------EG- 151 (206)
Q Consensus 81 ~~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~--------~~- 151 (206)
|+.+||+++|.++++++++++++++|+||++ |+++.+.|+++|+++++++++.||||+||++++++. ++
T Consensus 144 ~a~~Ad~~~v~a~~~~~g~~~~~~~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~ 221 (394)
T 2rfq_A 144 GCDHASWAVLGGPVIKDGRPVDFVSFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGL 221 (394)
T ss_dssp TGGGCSEEEEEEEEEETTEEEEEEEEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGG
T ss_pred CCcccceEEEeeeecCCCCCCceeEEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCc
Confidence 9999999999999843222347889999997 899988999999999999999999999999999975 22
Q ss_pred ---ccHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhc---ccCccccccccccCC
Q psy1303 152 ---EGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRI---AFGAPILKLQAVQLP 206 (206)
Q Consensus 152 ---~~~~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~---~~g~~l~~~~~iq~~ 206 (206)
.++......+...|+..++.++|+++++++.+++|+++|+ +||+||+++|.+|++
T Consensus 222 ~~~~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~~i~~~q~vq~~ 282 (394)
T 2rfq_A 222 ERNTAPVYKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVR 282 (394)
T ss_dssp TTCCCGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHHHHHH
T ss_pred ccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCcccccCHHHHHH
Confidence 2344444567788999999999999999999999999999 999999999999863
No 36
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=5.8e-37 Score=256.46 Aligned_cols=189 Identities=16% Similarity=0.170 Sum_probs=164.6
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++++.+|. ++...|..+|+++|+++|++ +|+.+++++++ | .++|++++|||+|||+|.|+||
T Consensus 92 ~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~ 157 (414)
T 2or0_A 92 DGASGWVTGIVG-VHPWELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFSSG 157 (414)
T ss_dssp CHHHHHHHHHHT-THHHHHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEETT
T ss_pred ChHHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEeccCC
Confidence 678888888887 78889999999999999999 69989998887 4 4789999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCC---ceEEEEeecCCCCeeec-cccccCCCCCCceeeEEEeceeeCCCCccCC--------
Q psy1303 82 GYEAKAFVCIAQADKSKKHK---GITAFIIPMDSPGLSLG-KKEDKLGIRASSTCNVILEDVKIPLDSVLGK-------- 149 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~---~~~~~lvp~~~~gv~~~-~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~-------- 149 (206)
+..||+++|.++++++++.+ ++.+|+||++ |+++. +.|+++|+++++++++.||||+||++++++.
T Consensus 158 a~~Ad~~~v~a~~~~~~g~~~~~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~ 235 (414)
T 2or0_A 158 TDHCQWAFLGAMVGDGEGGIATPSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRA 235 (414)
T ss_dssp GGGCSEEEEEEEECC-----CCCSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHH
T ss_pred CchhhEEEEEEEecCCCCCcccceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccccCC
Confidence 99999999999986433333 7899999997 89998 8899999999999999999999999999975
Q ss_pred CC----ccHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-CccccccccccCC
Q psy1303 150 EG----EGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAF-GAPILKLQAVQLP 206 (206)
Q Consensus 150 ~~----~~~~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~-g~~l~~~~~iq~~ 206 (206)
++ .|+......+...|+.+++.++|+++++++.+++|+++|++| |+||+++|.||++
T Consensus 236 ~g~~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~ 297 (414)
T 2or0_A 236 QKEAGRPEPLFNMPYSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQKIKEDPYVLSA 297 (414)
T ss_dssp HHHHTCSCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHHHHHH
T ss_pred CccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHHHH
Confidence 21 234444456778999999999999999999999999999999 9999999999863
No 37
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=5.3e-37 Score=257.28 Aligned_cols=189 Identities=18% Similarity=0.178 Sum_probs=167.5
Q ss_pred CCcchhhhhhhhhhhHHHHhccCCHHHHHhhhhHHhcCCeeeEEEeeCCCCCCCccCceeEEEEeCCEEEEeeeeeeeeC
Q psy1303 2 CGGTSTILTVHNCLYAGLINKFGTKKQKETYLPSFVDGTNVGCFGISEPGSGSDAANMLTTARKESDHWVLNGTKSWITN 81 (206)
Q Consensus 2 ~~s~a~~~~~~~~~~~~~l~~~g~~~q~~~~l~~i~~g~~~~~~a~te~~~g~~~~~~~~~a~~~~~g~~l~G~k~~v~~ 81 (206)
|+++++.+..|. ++..+|..+|+++|+++|++. |+.+.+++++ | .++|++++|||+|||+|.|+||
T Consensus 107 ~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~ 172 (422)
T 2jbr_A 107 CAGTAWAFSLLC-THSHQIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSG 172 (422)
T ss_dssp CHHHHHHHHHHH-HHHHHHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETT
T ss_pred CcCHHHHHHHHH-HHHHHHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecC
Confidence 678888877776 788899999999999999996 8888898877 3 4689999999999999999999
Q ss_pred CCCCCEEEEEEEeCCCCCCCceEEEEeecCCCCeeeccccccCCCCCCceeeEEEeceeeCCCCccCCC--------Ccc
Q psy1303 82 GYEAKAFVCIAQADKSKKHKGITAFIIPMDSPGLSLGKKEDKLGIRASSTCNVILEDVKIPLDSVLGKE--------GEG 153 (206)
Q Consensus 82 ~~~a~~~~v~a~~~~~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~~~~~~~~v~f~~v~vp~~~~l~~~--------~~~ 153 (206)
+.+||+++|.++++++++.+++++|+||++ |+++.+.|+++|+++++++++.|+||+||++++++.. +.|
T Consensus 173 a~~Ad~~~v~a~~~~~~g~~g~~~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g 250 (422)
T 2jbr_A 173 CDHAEYAIVGFNRFDADGNKIYSFGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFG 250 (422)
T ss_dssp GGGCSEEEEEEEEECTTSCEEEEEEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTT
T ss_pred CccccEEEEEEEecCCCCCceeEEEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCccc
Confidence 999999999999864334558899999997 8999889999999999999999999999999999864 444
Q ss_pred -----HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhc--ccCccccccccccCC
Q psy1303 154 -----FKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRI--AFGAPILKLQAVQLP 206 (206)
Q Consensus 154 -----~~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~--~~g~~l~~~~~iq~~ 206 (206)
+......+...|+..++.++|+++++++.+++|+++|+ +||+|++++|.+|++
T Consensus 251 ~~~~~~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~~i~~~q~vq~~ 310 (422)
T 2jbr_A 251 LYPDSKIFYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMR 310 (422)
T ss_dssp SCTTCSSSSSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCCBCTTCHHHHHH
T ss_pred ccCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCHHHHHH
Confidence 44455667888999999999999999999999999998 999999999999874
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=99.97 E-value=8.3e-31 Score=222.69 Aligned_cols=183 Identities=19% Similarity=0.209 Sum_probs=144.8
Q ss_pred HHHhccCC--HHHHHhhhhHHhcCCeeeEEEeeCCCCC--------CCc-cCceeEEEEeCCEEEEeeeeeeeeCCCCCC
Q psy1303 18 GLINKFGT--KKQKETYLPSFVDGTNVGCFGISEPGSG--------SDA-ANMLTTARKESDHWVLNGTKSWITNGYEAK 86 (206)
Q Consensus 18 ~~l~~~g~--~~q~~~~l~~i~~g~~~~~~a~te~~~g--------~~~-~~~~~~a~~~~~g~~l~G~k~~v~~~~~a~ 86 (206)
.++..+|+ ++|+++||+++++|+++.++++|||+.+ ||+ ...+ ++++++|||+|||+|.|+||+..||
T Consensus 118 ~~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad 196 (490)
T 1u8v_A 118 EIDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSH 196 (490)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCS
T ss_pred hHHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccC
Confidence 44568999 9999999999999999999999999864 665 3344 8889999999999999999999999
Q ss_pred EEEEEEEeCCC-CCCCceEEEEeecCCCCeeec---ccccc----------CCC-CC-CceeeEEEeceeeCCCCcc--C
Q psy1303 87 AFVCIAQADKS-KKHKGITAFIIPMDSPGLSLG---KKEDK----------LGI-RA-SSTCNVILEDVKIPLDSVL--G 148 (206)
Q Consensus 87 ~~~v~a~~~~~-~~~~~~~~~lvp~~~~gv~~~---~~~~~----------~g~-~~-~~~~~v~f~~v~vp~~~~l--~ 148 (206)
+++|+++++.+ +..++.++|+||+++|||++. +.++. +|+ +. ..++.+.||||+||++++| |
T Consensus 197 ~~iV~art~~~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g 276 (490)
T 1u8v_A 197 EHIIMPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQ 276 (490)
T ss_dssp EEEECCSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEES
T ss_pred EEEEEEecCCCCCCCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCC
Confidence 99999987532 223457899999999999994 34443 666 53 5678899999999999998 6
Q ss_pred CCCccHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 149 KEGEGFKVGLTGIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
..+.++......+...|+..++.++|.++.++..+...... +| ++++|.||++
T Consensus 277 ~~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~---~g--i~~~q~vq~~ 329 (490)
T 1u8v_A 277 EYDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY---NG--AQKASHVKDK 329 (490)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HT--CTTCHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--chhcHHHHHH
Confidence 77777877667777788877776666666666665543322 44 8899999863
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=99.97 E-value=1.5e-30 Score=220.67 Aligned_cols=175 Identities=18% Similarity=0.179 Sum_probs=143.3
Q ss_pred CHHHHHhhhhHHhcCCeeeEEEeeCCCCC--------CCccCceeEE-EEeCCEEEEeeeeeeeeCCCCCCEEEEEEEeC
Q psy1303 25 TKKQKETYLPSFVDGTNVGCFGISEPGSG--------SDAANMLTTA-RKESDHWVLNGTKSWITNGYEAKAFVCIAQAD 95 (206)
Q Consensus 25 ~~~q~~~~l~~i~~g~~~~~~a~te~~~g--------~~~~~~~~~a-~~~~~g~~l~G~k~~v~~~~~a~~~~v~a~~~ 95 (206)
.+||+++||+++++|+++.++++|||+.| +|+. +.+++ ++++|||+|||+|.|+|| ..||+++|+++++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~ 199 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSIL 199 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecC
Confidence 47999999999999999999999999865 5664 44555 478999999999999999 9999999999986
Q ss_pred CC-CCCCceEEEEeecCCCCeeec--ccccc--------CCCCC-CceeeEEEeceeeCCCCcc--CCCCccHHHH--HH
Q psy1303 96 KS-KKHKGITAFIIPMDSPGLSLG--KKEDK--------LGIRA-SSTCNVILEDVKIPLDSVL--GKEGEGFKVG--LT 159 (206)
Q Consensus 96 ~~-~~~~~~~~~lvp~~~~gv~~~--~~~~~--------~g~~~-~~~~~v~f~~v~vp~~~~l--~~~~~~~~~~--~~ 159 (206)
++ +...++++|+||+++||+++. +.+.. +|.+. ..++.+.||||+||++++| |..+.++... ..
T Consensus 200 ~~~~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~ 279 (481)
T 2yyk_A 200 LQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATG 279 (481)
T ss_dssp CCTTCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhh
Confidence 32 233468899999999999994 33432 46664 6788999999999999998 5555555443 56
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 160 GIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 160 ~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
.+...|+..++..+|.++.++..+..++.. +| |+++|.||++
T Consensus 280 ~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~g--i~~~q~vq~~ 321 (481)
T 2yyk_A 280 ALNHMAHQVVALKTAKTEAFLGVAALMAEG---IG--ADVYGHVQEK 321 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TT--GGGSHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHh---cC--hhhhHHHHHH
Confidence 778899999999999999999999888764 44 9999999863
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.96 E-value=3.2e-28 Score=206.89 Aligned_cols=176 Identities=15% Similarity=0.145 Sum_probs=130.1
Q ss_pred cCC--HHHHHhhhhHHhcCCeeeEEEeeCCCC--------CCCccCceeEEEEeCCEEEEeeeeeeeeCCCCCCEEEEEE
Q psy1303 23 FGT--KKQKETYLPSFVDGTNVGCFGISEPGS--------GSDAANMLTTARKESDHWVLNGTKSWITNGYEAKAFVCIA 92 (206)
Q Consensus 23 ~g~--~~q~~~~l~~i~~g~~~~~~a~te~~~--------g~~~~~~~~~a~~~~~g~~l~G~k~~v~~~~~a~~~~v~a 92 (206)
+++ .+|+++||+++++|+++.++++|||+. |+|+ .+.+ ..+++|||+|||.|.|+|++..||+++|++
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~-~~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a 204 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRI-VEKTDDGIIVNGVKAVGTGIAFGDYMHIGC 204 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEE-EEECSSEEEEEEEEEEEESGGGCSEEEECC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEE-EEEECCEEEEEEEEEEECCccccCEEEEEE
Confidence 554 589999999999999999999999985 4677 4443 345689999999999999999999999999
Q ss_pred EeCC-CCCCCceEEEEeecCCCCeeeccccccCCC-----CC-----CceeeEEEeceeeCCCCcc--CCCCccHHHHHH
Q psy1303 93 QADK-SKKHKGITAFIIPMDSPGLSLGKKEDKLGI-----RA-----SSTCNVILEDVKIPLDSVL--GKEGEGFKVGLT 159 (206)
Q Consensus 93 ~~~~-~~~~~~~~~~lvp~~~~gv~~~~~~~~~g~-----~~-----~~~~~v~f~~v~vp~~~~l--~~~~~~~~~~~~ 159 (206)
++++ .++. .+++|+||+++||+++...|..+|. +. ..++.+.||||+||++++| |..+.|+..+..
T Consensus 205 ~t~~~~~~~-~~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~ 283 (515)
T 3hwc_A 205 LYRPGIPGE-QVIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQR 283 (515)
T ss_dssp CCCTTCCGG-GCEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHH
T ss_pred EecCCCCCC-eEEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHH
Confidence 8732 2223 3889999999999999766666552 22 2378999999999999999 788888866544
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 160 GIDCARIGMASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 160 ~~~~~~~~~aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
.+...+....+..+|.++.++..+..++. .+| |++||.||++
T Consensus 284 ~~~~~~r~~~~~~~~~a~~~lG~A~~~~e---~~g--I~~fQ~Vq~k 325 (515)
T 3hwc_A 284 IFDWVHYHILIRQVLRAELIVGLAILITE---HIG--TSKLPTVSAR 325 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHT--CTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcC--CcccHHHHHH
Confidence 34333222223444555555554444432 244 8999999874
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.88 E-value=6.9e-22 Score=168.24 Aligned_cols=175 Identities=15% Similarity=0.064 Sum_probs=135.9
Q ss_pred HHHHhhhhHHhcCCeeeEEEeeCCCCCCCc-----cCc-eeEEEEeCCEEEEeeeeeeeeCCCCCCEEEEEEEeCCCCCC
Q psy1303 27 KQKETYLPSFVDGTNVGCFGISEPGSGSDA-----ANM-LTTARKESDHWVLNGTKSWITNGYEAKAFVCIAQADKSKKH 100 (206)
Q Consensus 27 ~q~~~~l~~i~~g~~~~~~a~te~~~g~~~-----~~~-~~~a~~~~~g~~l~G~k~~v~~~~~a~~~~v~a~~~~~~~~ 100 (206)
+-..+|+..+.++++..+.++++|...... ..+ -...++++|||+|||.|.|+||+..||+++|++++.+..+.
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~ 213 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPG 213 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCG
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCc
Confidence 556789999999999999999998531111 011 12456678999999999999999999999999988765556
Q ss_pred CceEEEEeecCCCCeeeccccccCCCCCC----------ceeeEEEeceeeCCCCcc--CCCCccHHHHHHhhhhHHHHH
Q psy1303 101 KGITAFIIPMDSPGLSLGKKEDKLGIRAS----------STCNVILEDVKIPLDSVL--GKEGEGFKVGLTGIDCARIGM 168 (206)
Q Consensus 101 ~~~~~~lvp~~~~gv~~~~~~~~~g~~~~----------~~~~v~f~~v~vp~~~~l--~~~~~~~~~~~~~~~~~~~~~ 168 (206)
++.+.|+||.++||+++.......+.+.. ..+.+.||||+||+++++ |..+.++......+...+...
T Consensus 214 d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~ 293 (517)
T 4g5e_A 214 DQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHA 293 (517)
T ss_dssp GGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHH
Confidence 67889999999999998433333332221 236799999999999987 777777777777888889888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCccccccccccCC
Q psy1303 169 ASQGIGIAQAAFDCAMEYAGKRIAFGAPILKLQAVQLP 206 (206)
Q Consensus 169 aa~~~G~~~~al~~~~~~~~~R~~~g~~l~~~~~iq~~ 206 (206)
++..++.++.++..+..++.. +| +.+||+||++
T Consensus 294 ~~~~~~~~~~~~g~a~~~ae~---~G--i~~fq~Vq~k 326 (517)
T 4g5e_A 294 LIRQSVRAELMAGLAILITEH---IG--TNKIPAVQTR 326 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HT--CTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---hC--CcccHHHHHH
Confidence 889999999999888887754 34 8899999863
Done!