Your job contains 1 sequence.
>psy13032
MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK
WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA
LLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLIYSAHNKAEKSLYSS
SRRASSPLLP
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13032
(190 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0086613 - symbol:Ino80 "Ino80" species:7227 "Droso... 681 1.1e-65 1
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 592 7.9e-57 2
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 592 8.0e-57 2
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 592 8.1e-57 2
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 592 8.1e-57 2
UNIPROTKB|H0YMN5 - symbol:INO80 "DNA helicase INO80" spec... 592 1.2e-56 1
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 592 3.1e-56 1
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"... 592 3.1e-56 1
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 586 1.4e-55 1
CGD|CAL0000831 - symbol:orf19.1734 species:5476 "Candida ... 545 2.5e-51 1
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 543 5.6e-51 1
SGD|S000003118 - symbol:INO80 "ATPase and nucleosome spac... 542 6.1e-51 1
POMBASE|SPAC29B12.01 - symbol:ino80 "SNF2 family helicase... 520 1.6e-48 1
DICTYBASE|DDB_G0292358 - symbol:ino80 "CHR group protein"... 498 5.4e-46 1
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 476 7.3e-44 1
FB|FBgn0020306 - symbol:dom "domino" species:7227 "Drosop... 303 4.8e-25 1
UNIPROTKB|G3N326 - symbol:LOC788113 "Uncharacterized prot... 294 8.3e-25 1
MGI|MGI:2444036 - symbol:Srcap "Snf2-related CREBBP activ... 294 8.3e-25 1
UNIPROTKB|J9PA15 - symbol:SRCAP "Uncharacterized protein"... 294 1.8e-24 1
UNIPROTKB|F6XHF3 - symbol:SRCAP "Uncharacterized protein"... 294 2.2e-24 1
UNIPROTKB|E2R6G6 - symbol:SRCAP "Uncharacterized protein"... 294 2.2e-24 1
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 294 4.3e-24 1
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 294 4.4e-24 1
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 294 4.4e-24 1
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 294 4.4e-24 1
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT... 285 2.3e-23 1
WB|WBGene00007027 - symbol:ssl-1 species:6239 "Caenorhabd... 278 1.6e-22 1
DICTYBASE|DDB_G0267638 - symbol:DDB_G0267638 "CHR group p... 273 7.0e-22 1
CGD|CAL0001763 - symbol:orf19.1871 species:5476 "Candida ... 257 1.7e-20 1
GENEDB_PFALCIPARUM|PF08_0048 - symbol:PF08_0048 "ATP-depe... 253 6.0e-20 1
UNIPROTKB|C0H4W3 - symbol:PF08_0048 "Probable ATP-depende... 253 6.0e-20 1
ASPGD|ASPL0000056677 - symbol:AN1024 species:162425 "Emer... 245 1.3e-19 1
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 246 1.8e-19 1
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 242 2.6e-19 1
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"... 238 6.6e-19 1
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"... 236 1.1e-18 1
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st... 238 1.6e-18 1
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph... 234 1.9e-18 1
FB|FBgn0250786 - symbol:Chd1 "Chromodomain-helicase-DNA-b... 238 2.1e-18 1
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 232 3.0e-18 1
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"... 232 3.0e-18 1
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi... 230 4.8e-18 1
DICTYBASE|DDB_G0285205 - symbol:snf2a "SNF2-related prote... 233 5.8e-18 1
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"... 227 8.9e-18 1
SGD|S000005831 - symbol:ISW2 "ATP-dependent DNA transloca... 217 9.5e-18 2
TAIR|locus:2041644 - symbol:CHR5 "chromatin remodeling 5"... 231 1.0e-17 1
UNIPROTKB|F1P3Q4 - symbol:SMARCA1 "Uncharacterized protei... 220 1.1e-17 2
SGD|S000000449 - symbol:ISW1 "ATPase subunit of imitation... 226 2.0e-17 1
UNIPROTKB|I3LRQ2 - symbol:CHD2 "Uncharacterized protein" ... 225 2.4e-17 1
UNIPROTKB|J9NSS6 - symbol:CHD2 "Uncharacterized protein" ... 225 3.4e-17 1
UNIPROTKB|J9NX79 - symbol:CHD2 "Uncharacterized protein" ... 225 4.4e-17 1
ASPGD|ASPL0000041040 - symbol:AN9077 species:162425 "Emer... 225 4.4e-17 1
UNIPROTKB|I3LQZ8 - symbol:CHD2 "Uncharacterized protein" ... 225 4.5e-17 1
UNIPROTKB|G3MXX3 - symbol:CHD2 "Uncharacterized protein" ... 225 4.8e-17 1
ZFIN|ZDB-GENE-050419-256 - symbol:chd2 "chromodomain heli... 225 4.8e-17 1
UNIPROTKB|O14647 - symbol:CHD2 "Chromodomain-helicase-DNA... 225 4.8e-17 1
UNIPROTKB|E2R5Z7 - symbol:CHD2 "Uncharacterized protein" ... 225 4.8e-17 1
UNIPROTKB|F1SA77 - symbol:CHD2 "Uncharacterized protein" ... 225 4.8e-17 1
UNIPROTKB|J9PA90 - symbol:CHD2 "Uncharacterized protein" ... 225 4.9e-17 1
WB|WBGene00010369 - symbol:chd-1 species:6239 "Caenorhabd... 223 6.0e-17 1
UNIPROTKB|E2RG62 - symbol:SMARCAD1 "Uncharacterized prote... 221 6.1e-17 1
UNIPROTKB|J9NX47 - symbol:SMARCAD1 "Uncharacterized prote... 221 6.1e-17 1
UNIPROTKB|J9PA79 - symbol:SMARCAD1 "Uncharacterized prote... 221 6.1e-17 1
UNIPROTKB|F1RWW3 - symbol:SMARCAD1 "Uncharacterized prote... 221 6.1e-17 1
UNIPROTKB|D4AD08 - symbol:Chd2 "Chromodomain helicase DNA... 224 6.2e-17 1
UNIPROTKB|I3LTT5 - symbol:SMARCA1 "Uncharacterized protei... 219 6.6e-17 1
UNIPROTKB|E1C1A9 - symbol:CHD2 "Uncharacterized protein" ... 223 7.4e-17 1
UNIPROTKB|J9NZH0 - symbol:SMARCA1 "Uncharacterized protei... 219 7.6e-17 1
UNIPROTKB|F1P0A4 - symbol:SMARCA5 "Uncharacterized protei... 214 8.3e-17 1
DICTYBASE|DDB_G0284171 - symbol:DDB_G0284171 "CHR group p... 223 8.4e-17 1
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 219 9.7e-17 1
SGD|S000001934 - symbol:IRC5 "Putative ATPase containing ... 218 9.8e-17 1
FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227... 219 1.0e-16 1
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass... 219 1.0e-16 1
MGI|MGI:1935127 - symbol:Smarca1 "SWI/SNF related, matrix... 219 1.0e-16 1
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 219 1.0e-16 1
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 219 1.0e-16 1
UNIPROTKB|K7GNV1 - symbol:SMARCA1 "Uncharacterized protei... 219 1.0e-16 1
UNIPROTKB|E2QVR5 - symbol:SMARCA1 "Uncharacterized protei... 219 1.1e-16 1
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 219 1.1e-16 1
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei... 219 1.1e-16 1
UNIPROTKB|F6XTU7 - symbol:SMARCA1 "Uncharacterized protei... 219 1.1e-16 1
TAIR|locus:2062840 - symbol:SYD "SPLAYED" species:3702 "A... 221 1.1e-16 2
UNIPROTKB|H9L0N0 - symbol:H9L0N0 "Uncharacterized protein... 220 1.2e-16 1
UNIPROTKB|Q9H4L7 - symbol:SMARCAD1 "SWI/SNF-related matri... 218 1.3e-16 1
UNIPROTKB|B6ZLK2 - symbol:CHD1 "Chromodomain-helicase-DNA... 220 1.5e-16 1
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel... 218 1.6e-16 1
MGI|MGI:95453 - symbol:Smarcad1 "SWI/SNF-related, matrix-... 217 1.6e-16 1
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote... 222 1.9e-16 1
RGD|1309640 - symbol:Smarcad1 "SWI/SNF-related, matrix-as... 216 2.1e-16 1
RGD|2323132 - symbol:LOC100359912 "SWI/SNF-related matrix... 214 2.2e-16 1
UNIPROTKB|G4NCV5 - symbol:MGG_01012 "ISWI chromatin-remod... 215 3.0e-16 1
UNIPROTKB|E1B7X9 - symbol:SMARCAD1 "SWI/SNF-related matri... 214 3.4e-16 1
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei... 214 3.5e-16 1
TAIR|locus:2054955 - symbol:ASG3 "ALTERED SEED GERMINATIO... 213 3.5e-16 1
MGI|MGI:1935129 - symbol:Smarca5 "SWI/SNF related, matrix... 214 3.5e-16 1
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass... 214 3.5e-16 1
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei... 214 3.5e-16 1
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei... 214 3.5e-16 1
UNIPROTKB|O60264 - symbol:SMARCA5 "SWI/SNF-related matrix... 214 3.5e-16 1
WARNING: Descriptions of 274 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 681 (244.8 bits), Expect = 1.1e-65, P = 1.1e-65
Identities = 129/166 (77%), Positives = 142/166 (85%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
M RFVPDFKVVPYWGSP ERKILRQFWD K+LHT+DASFHVVITSYQLVVSD+KYFNRIK
Sbjct: 603 MSRFVPDFKVVPYWGSPAERKILRQFWDQKHLHTRDASFHVVITSYQLVVSDYKYFNRIK 662
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
WQY++LDEAQAI + S RWKLLLGFSCRNRLLLSGTPIQNSMAELWA
Sbjct: 663 WQYMVLDEAQAI------------KSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 710
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
LLHFIMP++FDSHDEFNEWFSKDIESHAENKT IDE++ + M++
Sbjct: 711 LLHFIMPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMIL 756
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 592 (213.5 bits), Expect = 7.9e-57, Sum P(2) = 7.9e-57
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
RFVP FKV+PYWG+P +RK++R+FW K L+T+DA FHVVITSYQLVV D KYF R+KWQ
Sbjct: 590 RFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQ 649
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y++LDEAQA+ + S+RWK+LL F CRNRLLL+GTPIQN+MAELWALL
Sbjct: 650 YMVLDEAQAL------------KSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALL 697
Query: 123 HFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
HFIMP++FDSH+EFNEWFSKDIESHAENK++IDE + + M++
Sbjct: 698 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMIL 741
Score = 36 (17.7 bits), Expect = 7.9e-57, Sum P(2) = 7.9e-57
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 160 PIVLMLIYSAHNKA 173
P++ L++S+H KA
Sbjct: 969 PLLKSLVFSSHCKA 982
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 592 (213.5 bits), Expect = 8.0e-57, Sum P(2) = 8.0e-57
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
RFVP FKV+PYWG+P +RK++R+FW K L+T+DA FHVVITSYQLVV D KYF R+KWQ
Sbjct: 591 RFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQ 650
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y++LDEAQA+ + S+RWK+LL F CRNRLLL+GTPIQN+MAELWALL
Sbjct: 651 YMVLDEAQAL------------KSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALL 698
Query: 123 HFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
HFIMP++FDSH+EFNEWFSKDIESHAENK++IDE + + M++
Sbjct: 699 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMIL 742
Score = 36 (17.7 bits), Expect = 8.0e-57, Sum P(2) = 8.0e-57
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 160 PIVLMLIYSAHNKA 173
P++ L++S+H KA
Sbjct: 970 PLLKSLVFSSHCKA 983
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 592 (213.5 bits), Expect = 8.1e-57, Sum P(2) = 8.1e-57
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
RFVP FKV+PYWG+P +RK++R+FW K L+T+DA FHVVITSYQLVV D KYF R+KWQ
Sbjct: 597 RFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQ 656
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y++LDEAQA+ + S+RWK+LL F CRNRLLL+GTPIQN+MAELWALL
Sbjct: 657 YMVLDEAQAL------------KSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALL 704
Query: 123 HFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
HFIMP++FDSH+EFNEWFSKDIESHAENK++IDE + + M++
Sbjct: 705 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMIL 748
Score = 36 (17.7 bits), Expect = 8.1e-57, Sum P(2) = 8.1e-57
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 160 PIVLMLIYSAHNKA 173
P++ L++S+H KA
Sbjct: 976 PLLKSLVFSSHCKA 989
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 592 (213.5 bits), Expect = 8.1e-57, Sum P(2) = 8.1e-57
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
RFVP FKV+PYWG+P +RK++R+FW K L+T+DA FHVVITSYQLVV D KYF R+KWQ
Sbjct: 597 RFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQ 656
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y++LDEAQA+ + S+RWK+LL F CRNRLLL+GTPIQN+MAELWALL
Sbjct: 657 YMVLDEAQAL------------KSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALL 704
Query: 123 HFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
HFIMP++FDSH+EFNEWFSKDIESHAENK++IDE + + M++
Sbjct: 705 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMIL 748
Score = 36 (17.7 bits), Expect = 8.1e-57, Sum P(2) = 8.1e-57
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 160 PIVLMLIYSAHNKA 173
P++ L++S+H KA
Sbjct: 976 PLLKSLVFSSHCKA 989
>UNIPROTKB|H0YMN5 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 PROSITE:PS51413
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AC020661 GO:GO:0016817 ChiTaRS:INO80
HGNC:HGNC:26956 EMBL:AC021753 ProteinModelPortal:H0YMN5 SMR:H0YMN5
Ensembl:ENST00000558357 Bgee:H0YMN5 Uniprot:H0YMN5
Length = 1104
Score = 592 (213.5 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
RFVP FKV+PYWG+P +RK++R+FW K L+T+DA FHVVITSYQLVV D KYF R+KWQ
Sbjct: 588 RFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQ 647
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y++LDEAQA+ + S+RWK+LL F CRNRLLL+GTPIQN+MAELWALL
Sbjct: 648 YMVLDEAQAL------------KSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALL 695
Query: 123 HFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
HFIMP++FDSH+EFNEWFSKDIESHAENK++IDE + + M++
Sbjct: 696 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMIL 739
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 592 (213.5 bits), Expect = 3.1e-56, P = 3.1e-56
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
RFVP FKV+PYWG+P +RK++R+FW K L+T+DA FHVVITSYQLVV D KYF R+KWQ
Sbjct: 588 RFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQ 647
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y++LDEAQA+ + S+RWK+LL F CRNRLLL+GTPIQN+MAELWALL
Sbjct: 648 YMVLDEAQAL------------KSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALL 695
Query: 123 HFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
HFIMP++FDSH+EFNEWFSKDIESHAENK++IDE + + M++
Sbjct: 696 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMIL 739
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 592 (213.5 bits), Expect = 3.1e-56, P = 3.1e-56
Identities = 107/164 (65%), Positives = 133/164 (81%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
RFVP FKV+PYWG+P +RK++R+FW K L+T+DA FHVVITSYQLVV D KYF R+KWQ
Sbjct: 593 RFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQ 652
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y++LDEAQA+ + S+RWK+LL F CRNRLLL+GTPIQN+MAELWALL
Sbjct: 653 YMVLDEAQAL------------KSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALL 700
Query: 123 HFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
HFIMP++FDSH+EFNEWFSKDIESHAENK++IDE + + M++
Sbjct: 701 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMIL 744
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 586 (211.3 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 106/164 (64%), Positives = 133/164 (81%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
RFVP FKV+PYWG+P +RK++R+FW K L+T++A FHVVITSYQLVV D KYF R+KWQ
Sbjct: 589 RFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVVQDVKYFQRVKWQ 648
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y++LDEAQA+ + S+RWK+LL F CRNRLLL+GTPIQN+MAELWALL
Sbjct: 649 YMVLDEAQAL------------KSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALL 696
Query: 123 HFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
HFIMP++FDSH+EFNEWFSKDIESHAENK++IDE + + M++
Sbjct: 697 HFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMIL 740
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 545 (196.9 bits), Expect = 2.5e-51, P = 2.5e-51
Identities = 100/165 (60%), Positives = 132/165 (80%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNL-HTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+FVP+FKV+PYWG+ ++RKILR+FWD K+L + KD+ FHV++TSYQL+V+D YF ++KW
Sbjct: 742 KFVPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSPFHVLVTSYQLIVADIAYFQKMKW 801
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
QY+ILDEAQAI + S RWK LL +CRNRLLL+GTPIQNSM ELWAL
Sbjct: 802 QYMILDEAQAI------------KSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQELWAL 849
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
LHFIMPS+FDSHDEF++WF+KDIESHA++ TS+DE++ + M++
Sbjct: 850 LHFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDEQQLRRLHMIL 894
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 543 (196.2 bits), Expect = 5.6e-51, P = 5.6e-51
Identities = 100/165 (60%), Positives = 132/165 (80%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNL-HTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+FVP+ KV+PYWG+ ++RKILR+FWD K++ +TK++ FHV++TSYQLVV D +YF ++KW
Sbjct: 868 KFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKESEFHVLVTSYQLVVLDAQYFQKVKW 927
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
QY+ILDEAQAI + QS RWK LLGF CRNRLLL+GTPIQN+M ELWAL
Sbjct: 928 QYMILDEAQAI------------KSSQSSRWKSLLGFHCRNRLLLTGTPIQNNMQELWAL 975
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
LHFIMP++FDSHDEF+EWFSKDIESHA++ T ++E + + M++
Sbjct: 976 LHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNEDQLRRLHMIL 1020
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 542 (195.9 bits), Expect = 6.1e-51, P = 6.1e-51
Identities = 100/167 (59%), Positives = 129/167 (77%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNL-HTKDASFHVVITSYQLVVSDFKYFNRI 59
+ +F+P FK++PYWG+ +RK+LR+FWD KNL + K+A FHV++TSYQ+VV+D Y ++
Sbjct: 774 ISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKM 833
Query: 60 KWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELW 119
KWQY+ILDEAQAI + QS RWK LL F CRNRLLL+GTPIQNSM ELW
Sbjct: 834 KWQYMILDEAQAI------------KSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELW 881
Query: 120 ALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
ALLHFIMPS+FDSHDEFNEWFSKDIESHAE T +++++ + M++
Sbjct: 882 ALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMIL 928
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 520 (188.1 bits), Expect = 1.6e-48, P = 1.6e-48
Identities = 98/165 (59%), Positives = 126/165 (76%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNL-HTKDASFHVVITSYQLVVSDFKYFNRIKW 61
RFVP K +PYWGS ++RKILR+FW KN+ + +++ FHVV+TSYQLVV D +YF +KW
Sbjct: 912 RFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVVLDAQYFQSVKW 971
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
QY+ILDEAQAI + S RWK LL F CRNRLLL+GTPIQN+M ELWAL
Sbjct: 972 QYMILDEAQAI------------KSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWAL 1019
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
LHFIMPS+FDSH+EF+EWFSKDIESHA++ T ++E++ + M++
Sbjct: 1020 LHFIMPSLFDSHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMIL 1064
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 498 (180.4 bits), Expect = 5.4e-46, P = 5.4e-46
Identities = 90/164 (54%), Positives = 124/164 (75%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
+FVP FKV+PYWG+ Q+R +R++W+ K L+ +++ FHV+ITSY ++V D KYF+R++WQ
Sbjct: 1232 KFVPAFKVIPYWGTQQQRTTIRKYWNPKKLYHRNSPFHVLITSYNVIVRDEKYFHRLRWQ 1291
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y++LDEA AI + S RWK L+ F+CRNRLLL+GTPIQNSMAELWALL
Sbjct: 1292 YMVLDEAHAI------------KSSASNRWKTLMSFNCRNRLLLTGTPIQNSMAELWALL 1339
Query: 123 HFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
HFIMP+ FDSHDEF EWFSKDIE+HA ++ ++E + + M++
Sbjct: 1340 HFIMPTFFDSHDEFAEWFSKDIENHAMSQGGLNEHQLNRLHMIL 1383
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 476 (172.6 bits), Expect = 7.3e-44, P = 7.3e-44
Identities = 90/137 (65%), Positives = 110/137 (80%)
Query: 30 KNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQS 89
K L+T+DA FHVVITSYQLVV D KYF R+KWQY++LDEAQA+ + S
Sbjct: 611 KTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQAL------------KSSSS 658
Query: 90 MRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAE 149
+RWK+LL F CRNRLLL+GTPIQN+MAELWALLHFIMP++FDSH+EFNEWFSKDIESHAE
Sbjct: 659 VRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAE 718
Query: 150 NKTSIDEREYPIVLMLI 166
NK++IDE + + M++
Sbjct: 719 NKSAIDENQLSRLHMIL 735
Score = 246 (91.7 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 46/70 (65%), Positives = 55/70 (78%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
RFVP FKV+PYWG+P +RK K L+T+DA FHVVITSYQLVV D KYF R+KWQ
Sbjct: 590 RFVPKFKVLPYWGNPHDRK------KKKTLYTQDAPFHVVITSYQLVVQDVKYFQRVKWQ 643
Query: 63 YLILDEAQAI 72
Y++LDEAQA+
Sbjct: 644 YMVLDEAQAL 653
Score = 40 (19.1 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 18/76 (23%), Positives = 32/76 (42%)
Query: 111 IQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAE---NKTSIDEREYPI------ 161
+Q +A W L + + + H + W D ESH NK + ++P+
Sbjct: 903 LQGLLAR-WLALFLSLKASYRLH-QLRSWGEPDGESHQRYLRNKDFLLGVDFPLSFPNLC 960
Query: 162 ----VLMLIYSAHNKA 173
+ L++S+H KA
Sbjct: 961 SCPLLKSLVFSSHCKA 976
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 303 (111.7 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 70/147 (47%), Positives = 90/147 (61%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LVV D + F R KW+YLILDEAQ N+ ++ +S RW+
Sbjct: 1009 TKPNAFHVCITSYKLVVQDQQSFRRKKWKYLILDEAQ-----NIKNF-------KSQRWQ 1056
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKD----IESHAE 149
LLL FS RLLL+GTP+QN + ELW+L+HF+MP +F SH EF EWFS IE + E
Sbjct: 1057 LLLNFSTERRLLLTGTPLQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNME 1116
Query: 150 -NKTSIDEREYPIVLMLIYSAHNKAEK 175
N+T I I L+ + EK
Sbjct: 1117 YNETLITRLHKVIRPFLLRRLKKEVEK 1143
Score = 177 (67.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 44/106 (41%), Positives = 63/106 (59%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+++ P FK++ Y+GS +ERK+ R W TK +FHV ITSY+LVV D + F R KW
Sbjct: 983 KKWCPGFKILTYYGSQKERKLKRVGW------TKPNAFHVCITSYKLVVQDQQSFRRKKW 1036
Query: 62 QYLILDEAQAIVDINV--YSYLNDIEREQSMRWKLLLGFSCRNRLL 105
+YLILDEAQ I + + L + E+ + LL G +N L+
Sbjct: 1037 KYLILDEAQNIKNFKSQRWQLLLNFSTERRL---LLTGTPLQNDLM 1079
>UNIPROTKB|G3N326 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
Ensembl:ENSBTAT00000063921 Uniprot:G3N326
Length = 934
Score = 294 (108.6 bits), Expect = 8.3e-25, P = 8.3e-25
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LV+ D + F R W+YLILDEAQ N+ ++ +S RW+
Sbjct: 703 TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ-----NIKNF-------KSQRWQ 750
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
LL F+ + RLLL+GTP+QNS+ ELW+L+HF+MP +F SH EF EWFS + E
Sbjct: 751 SLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQE 810
Query: 154 IDE 156
+E
Sbjct: 811 YNE 813
Score = 188 (71.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++R+ P FK++ Y+G+ +ERK+ RQ W TK +FHV ITSY+LV+ D + F R
Sbjct: 676 LKRWCPSFKILTYYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKN 729
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
W+YLILDEAQ I + + + S R LL G +N L+
Sbjct: 730 WRYLILDEAQNIKNFKSQRW-QSLLNFNSQRRLLLTGTPLQNSLM 773
>MGI|MGI:2444036 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
Length = 936
Score = 294 (108.6 bits), Expect = 8.3e-25, P = 8.3e-25
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LV+ D + F R W+YLILDEAQ N+ ++ +S RW+
Sbjct: 705 TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ-----NIKNF-------KSQRWQ 752
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
LL F+ + RLLL+GTP+QNS+ ELW+L+HF+MP +F SH EF EWFS + E
Sbjct: 753 SLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQE 812
Query: 154 IDE 156
+E
Sbjct: 813 YNE 815
Score = 188 (71.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++R+ P FK++ Y+G+ +ERK+ RQ W TK +FHV ITSY+LV+ D + F R
Sbjct: 678 LKRWCPSFKILTYYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKN 731
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
W+YLILDEAQ I + + + S R LL G +N L+
Sbjct: 732 WRYLILDEAQNIKNFKSQRW-QSLLNFNSQRRLLLTGTPLQNSLM 775
>UNIPROTKB|J9PA15 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
EMBL:AAEX03004382 EMBL:AAEX03004383 EMBL:AAEX03004384
EMBL:AAEX03004387 EMBL:AAEX03004388 Ensembl:ENSCAFT00000048702
Uniprot:J9PA15
Length = 1555
Score = 294 (108.6 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LV+ D + F R W+YLILDEAQ N+ ++ +S RW+
Sbjct: 719 TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ-----NIKNF-------KSQRWQ 766
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
LL F+ + RLLL+GTP+QNS+ ELW+L+HF+MP +F SH EF EWFS + E
Sbjct: 767 SLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQE 826
Query: 154 IDE 156
+E
Sbjct: 827 YNE 829
Score = 188 (71.2 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++R+ P FK++ Y+G+ +ERK+ RQ W TK +FHV ITSY+LV+ D + F R
Sbjct: 692 LKRWCPSFKILTYYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKN 745
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
W+YLILDEAQ I + + + S R LL G +N L+
Sbjct: 746 WRYLILDEAQNIKNFKSQRW-QSLLNFNSQRRLLLTGTPLQNSLM 789
>UNIPROTKB|F6XHF3 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
Ensembl:ENSCAFT00000026363 EMBL:AAEX03004382 EMBL:AAEX03004383
EMBL:AAEX03004384 EMBL:AAEX03004387 EMBL:AAEX03004388
Uniprot:F6XHF3
Length = 1823
Score = 294 (108.6 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LV+ D + F R W+YLILDEAQ N+ ++ +S RW+
Sbjct: 719 TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ-----NIKNF-------KSQRWQ 766
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
LL F+ + RLLL+GTP+QNS+ ELW+L+HF+MP +F SH EF EWFS + E
Sbjct: 767 SLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQE 826
Query: 154 IDE 156
+E
Sbjct: 827 YNE 829
Score = 188 (71.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++R+ P FK++ Y+G+ +ERK+ RQ W TK +FHV ITSY+LV+ D + F R
Sbjct: 692 LKRWCPSFKILTYYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKN 745
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
W+YLILDEAQ I + + + S R LL G +N L+
Sbjct: 746 WRYLILDEAQNIKNFKSQRW-QSLLNFNSQRRLLLTGTPLQNSLM 789
>UNIPROTKB|E2R6G6 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 Ensembl:ENSCAFT00000026363
Uniprot:E2R6G6
Length = 1825
Score = 294 (108.6 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LV+ D + F R W+YLILDEAQ N+ ++ +S RW+
Sbjct: 719 TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ-----NIKNF-------KSQRWQ 766
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
LL F+ + RLLL+GTP+QNS+ ELW+L+HF+MP +F SH EF EWFS + E
Sbjct: 767 SLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQE 826
Query: 154 IDE 156
+E
Sbjct: 827 YNE 829
Score = 188 (71.2 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++R+ P FK++ Y+G+ +ERK+ RQ W TK +FHV ITSY+LV+ D + F R
Sbjct: 692 LKRWCPSFKILTYYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKN 745
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
W+YLILDEAQ I + + + S R LL G +N L+
Sbjct: 746 WRYLILDEAQNIKNFKSQRW-QSLLNFNSQRRLLLTGTPLQNSLM 789
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 294 (108.6 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LV+ D + F R W+YLILDEAQ N+ ++ +S RW+
Sbjct: 723 TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ-----NIKNF-------KSQRWQ 770
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
LL F+ + RLLL+GTP+QNS+ ELW+L+HF+MP +F SH EF EWFS + E
Sbjct: 771 SLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQE 830
Query: 154 IDE 156
+E
Sbjct: 831 YNE 833
Score = 188 (71.2 bits), Expect = 7.8e-13, P = 7.8e-13
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++R+ P FK++ Y+G+ +ERK+ RQ W TK +FHV ITSY+LV+ D + F R
Sbjct: 696 LKRWCPSFKILTYYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKN 749
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
W+YLILDEAQ I + + + S R LL G +N L+
Sbjct: 750 WRYLILDEAQNIKNFKSQRW-QSLLNFNSQRRLLLTGTPLQNSLM 793
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 294 (108.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LV+ D + F R W+YLILDEAQ N+ ++ +S RW+
Sbjct: 713 TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ-----NIKNF-------KSQRWQ 760
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
LL F+ + RLLL+GTP+QNS+ ELW+L+HF+MP +F SH EF EWFS + E
Sbjct: 761 SLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQE 820
Query: 154 IDE 156
+E
Sbjct: 821 YNE 823
Score = 188 (71.2 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++R+ P FK++ Y+G+ +ERK+ RQ W TK +FHV ITSY+LV+ D + F R
Sbjct: 686 LKRWCPSFKILTYYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKN 739
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
W+YLILDEAQ I + + + S R LL G +N L+
Sbjct: 740 WRYLILDEAQNIKNFKSQRW-QSLLNFNSQRRLLLTGTPLQNSLM 783
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 294 (108.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LV+ D + F R W+YLILDEAQ N+ ++ +S RW+
Sbjct: 720 TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ-----NIKNF-------KSQRWQ 767
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
LL F+ + RLLL+GTP+QNS+ ELW+L+HF+MP +F SH EF EWFS + E
Sbjct: 768 SLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQE 827
Query: 154 IDE 156
+E
Sbjct: 828 YNE 830
Score = 188 (71.2 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++R+ P FK++ Y+G+ +ERK+ RQ W TK +FHV ITSY+LV+ D + F R
Sbjct: 693 LKRWCPSFKILTYYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKN 746
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
W+YLILDEAQ I + + + S R LL G +N L+
Sbjct: 747 WRYLILDEAQNIKNFKSQRW-QSLLNFNSQRRLLLTGTPLQNSLM 790
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 294 (108.6 bits), Expect = 4.4e-24, P = 4.4e-24
Identities = 59/123 (47%), Positives = 80/123 (65%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
TK +FHV ITSY+LV+ D + F R W+YLILDEAQ N+ ++ +S RW+
Sbjct: 721 TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQ-----NIKNF-------KSQRWQ 768
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
LL F+ + RLLL+GTP+QNS+ ELW+L+HF+MP +F SH EF EWFS + E
Sbjct: 769 SLLNFNSQRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQE 828
Query: 154 IDE 156
+E
Sbjct: 829 YNE 831
Score = 188 (71.2 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 43/105 (40%), Positives = 62/105 (59%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++R+ P FK++ Y+G+ +ERK+ RQ W TK +FHV ITSY+LV+ D + F R
Sbjct: 694 LKRWCPSFKILTYYGAQKERKLKRQGW------TKPNAFHVCITSYKLVLQDHQAFRRKN 747
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
W+YLILDEAQ I + + + S R LL G +N L+
Sbjct: 748 WRYLILDEAQNIKNFKSQRW-QSLLNFNSQRRLLLTGTPLQNSLM 791
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 285 (105.4 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 55/119 (46%), Positives = 76/119 (63%)
Query: 38 SFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLG 97
SFHV IT+Y+LV+ D K F R KW+YLILDEA I + +S RW+ LL
Sbjct: 635 SFHVCITTYRLVIQDSKMFKRKKWKYLILDEAHLI------------KNWKSQRWQTLLN 682
Query: 98 FSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDE 156
F+ + R+LL+GTP+QN + ELW+L+HF+MP +F SH EF +WF I E + I++
Sbjct: 683 FNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINK 741
Score = 176 (67.0 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 45/103 (43%), Positives = 62/103 (60%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
++ P FK++ Y+GS +ERK+ RQ W MK L+ SFHV IT+Y+LV+ D K F R KW+
Sbjct: 606 KWCPAFKILTYFGSAKERKLKRQGW-MK-LN----SFHVCITTYRLVIQDSKMFKRKKWK 659
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
YLILDEA I + + + S R LL G +N L+
Sbjct: 660 YLILDEAHLIKNWKSQRW-QTLLNFNSKRRILLTGTPLQNDLM 701
Score = 39 (18.8 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 139 WFSKDIESHAENKTSIDEREYPIVLMLIYSAHNKAE 174
W +E+ EN+ +E+E+ + + Y +AE
Sbjct: 1404 WDPIIVEAAMENEAGFEEKEWELDHIEKYKEEMEAE 1439
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 278 (102.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 55/115 (47%), Positives = 73/115 (63%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
K FHV ITSY+ V D + F + WQYLILDEAQ +I+ +S RW+
Sbjct: 654 KPNCFHVCITSYKTVTQDIRAFKQRAWQYLILDEAQ------------NIKNWKSQRWQA 701
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LL R RLLL+GTP+QNS+ ELW+L+HF+MP++F SHD+F +WFS + E
Sbjct: 702 LLNVRARRRLLLTGTPLQNSLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMME 756
Score = 139 (54.0 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+++ P K++ Y+G+ +ER R+ W N FHV ITSY+ V D + F + W
Sbjct: 627 KKWCPALKILTYFGTAKERAEKRKGWMKPNC------FHVCITSYKTVTQDIRAFKQRAW 680
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
QYLILDEAQ I + + + ++ R LL G +N L+
Sbjct: 681 QYLILDEAQNIKNWKSQRW-QALLNVRARRRLLLTGTPLQNSLM 723
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 273 (101.2 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 53/123 (43%), Positives = 76/123 (61%)
Query: 34 TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWK 93
+K +FHV ITSY +V+SD F R KW Y+ILDEA I + ++ RW+
Sbjct: 876 SKSNAFHVCITSYSMVMSDHLIFRRKKWVYMILDEAHVIKNF------------KTQRWQ 923
Query: 94 LLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
+L F+ RLLL+GTP+QN++ ELW+L+HF+MP +F SH EF +WFS + E
Sbjct: 924 NMLHFNTERRLLLTGTPLQNNLMELWSLMHFLMPDIFQSHREFQDWFSNPVTGMIEGGDD 983
Query: 154 IDE 156
++E
Sbjct: 984 VNE 986
Score = 160 (61.4 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 38/104 (36%), Positives = 54/104 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+R+ P K+ Y G+ ++RK R+ W N +FHV ITSY +V+SD F R KW
Sbjct: 850 KRWCPGLKIFTYHGTSRDRKANRKGWSKSN------AFHVCITSYSMVMSDHLIFRRKKW 903
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLL 105
Y+ILDEA I + + N + R LL G +N L+
Sbjct: 904 VYMILDEAHVIKNFKTQRWQNMLHFNTERRL-LLTGTPLQNNLM 946
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 257 (95.5 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 60/138 (43%), Positives = 83/138 (60%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
K +FHV ITSYQLVV D + F R +W Y+ILDEA N+ ++ +S RW+
Sbjct: 919 KPDAFHVCITSYQLVVQDQQSFKRRRWTYMILDEAH-----NIKNF-------RSTRWRA 966
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSM---------FDSHDEFNEWFSKDI- 144
LL F+ NRLLL+GTP+QN++ ELW+LL+F+MPS F + D+F +WF K +
Sbjct: 967 LLNFNTENRLLLTGTPLQNNLMELWSLLYFLMPSSKVNQAMPEGFANLDDFQQWFGKPVN 1026
Query: 145 ----ESHAENKTSIDERE 158
++ A N IDE E
Sbjct: 1027 RILEQTSAGNSDLIDENE 1044
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 253 (94.1 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 54/120 (45%), Positives = 74/120 (61%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
KD SFH+ I+SY VV D F R +W+Y+ILDEA I + N + RW +
Sbjct: 759 KD-SFHICISSYSTVVKDHLVFKRKRWKYIILDEAHNIKNFN------------TKRWNI 805
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+L N LL++GTP+QNS+ ELW+LLHF+MP++F SH +F EWFS + E K+ I
Sbjct: 806 ILSLKRDNCLLITGTPLQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIE-KSKI 864
Score = 155 (59.6 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 38/106 (35%), Positives = 59/106 (55%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++RF P FK++ Y+G+ ER R W KD SFH+ I+SY VV D F R +
Sbjct: 730 LKRFCPCFKILSYYGNQNERYKKRVGW-----FNKD-SFHICISSYSTVVKDHLVFKRKR 783
Query: 61 WQYLILDEAQAIVDINV--YSYLNDIEREQSMRWKLLLGFSCRNRL 104
W+Y+ILDEA I + N ++ + ++R+ + L+ G +N L
Sbjct: 784 WKYIILDEAHNIKNFNTKRWNIILSLKRDNCL---LITGTPLQNSL 826
Score = 34 (17.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 134 DEFNEWFSKDIESHAENKTSID 155
+E N SKD ++ +N +ID
Sbjct: 1198 NEQNNNNSKDNNNNIDNNNNID 1219
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 253 (94.1 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 54/120 (45%), Positives = 74/120 (61%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
KD SFH+ I+SY VV D F R +W+Y+ILDEA I + N + RW +
Sbjct: 759 KD-SFHICISSYSTVVKDHLVFKRKRWKYIILDEAHNIKNFN------------TKRWNI 805
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+L N LL++GTP+QNS+ ELW+LLHF+MP++F SH +F EWFS + E K+ I
Sbjct: 806 ILSLKRDNCLLITGTPLQNSLEELWSLLHFLMPNIFTSHLDFKEWFSDPLNLAIE-KSKI 864
Score = 155 (59.6 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 38/106 (35%), Positives = 59/106 (55%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++RF P FK++ Y+G+ ER R W KD SFH+ I+SY VV D F R +
Sbjct: 730 LKRFCPCFKILSYYGNQNERYKKRVGW-----FNKD-SFHICISSYSTVVKDHLVFKRKR 783
Query: 61 WQYLILDEAQAIVDINV--YSYLNDIEREQSMRWKLLLGFSCRNRL 104
W+Y+ILDEA I + N ++ + ++R+ + L+ G +N L
Sbjct: 784 WKYIILDEAHNIKNFNTKRWNIILSLKRDNCL---LITGTPLQNSL 826
Score = 34 (17.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 134 DEFNEWFSKDIESHAENKTSID 155
+E N SKD ++ +N +ID
Sbjct: 1198 NEQNNNNSKDNNNNIDNNNNID 1219
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 245 (91.3 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 57/169 (33%), Positives = 98/169 (57%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQ-FWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
R+ P K V Y G+ ER LR+ F ++++ + D F VV TSY++ ++D K+ + +W
Sbjct: 271 RWTPGIKTVLYHGTRDERAQLRKKFMNLRDQKSPD--FPVVCTSYEICMNDRKFLAQYQW 328
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+Y+I+DE + ++N K LL ++ NRLL++GTP+QN++ ELW+L
Sbjct: 329 RYIIVDEGHRLKNMNCRLI------------KELLSYNSANRLLITGTPLQNNITELWSL 376
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAEN--KTSIDEREYPIVLMLIYS 168
LHF++P +F+ + F WF D S +N +T + ER ++ ++S
Sbjct: 377 LHFLLPEIFNDLNSFQNWF--DFSSVLDNNGQTDMIERRKRTLVSTMHS 423
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 246 (91.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 53/118 (44%), Positives = 77/118 (65%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
K ++HV ITSYQLV+ D + F R KWQY+ILDEA N+ ++ +S RW+
Sbjct: 543 KPDTWHVCITSYQLVLQDHQPFRRKKWQYMILDEAH-----NIKNF-------RSQRWQS 590
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMP-------SMFDSHDEFNEWFSKDIE 145
LL F+ +RLLL+GTP+QN++ ELW+LL+F+MP S F + +F +WFSK ++
Sbjct: 591 LLNFNAEHRLLLTGTPLQNNLVELWSLLYFLMPAGVTQNNSAFANLKDFQDWFSKPMD 648
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 242 (90.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 60/169 (35%), Positives = 95/169 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASF--H-VVITSYQLVVSDFKYFNR 58
+RF PD + Y G+ QER+ L +KN+H + + H VVITS+++ + D
Sbjct: 292 QRFTPDIPTMLYHGTQQERRKL-----VKNIHKRKGTLQIHPVVITSFEIAMRDRNALQH 346
Query: 59 IKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAEL 118
W+YLI+DE I ++ + +++R F+ N+LLL+GTP+QN+++EL
Sbjct: 347 CYWKYLIVDEGHRIKNMKC-RLIRELKR-----------FNADNKLLLTGTPLQNNLSEL 394
Query: 119 WALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI--DEREYPIVLML 165
W+LL+F++P +FD F WF DI S +E I ERE ++ ML
Sbjct: 395 WSLLNFLLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHML 441
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 238 (88.8 bits), Expect = 6.6e-19, P = 6.6e-19
Identities = 59/169 (34%), Positives = 96/169 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASF--H-VVITSYQLVVSDFKYFNR 58
+RF P+ + Y G+ QER+IL +K++H + + H VVITS+++ + D
Sbjct: 269 KRFTPEIPTMLYHGTQQERRIL-----VKHIHERKGTLQIHPVVITSFEIAMRDRTTLQN 323
Query: 59 IKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAEL 118
W+YLI+DE I ++ + +++R F+ N+LLL+GTP+QN+++EL
Sbjct: 324 CYWKYLIVDEGHRIKNMKC-RLIRELKR-----------FNADNKLLLTGTPLQNNLSEL 371
Query: 119 WALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI--DEREYPIVLML 165
W+LL+F++P +FD F WF DI S +E I ERE ++ ML
Sbjct: 372 WSLLNFLLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHML 418
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 236 (88.1 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 60/169 (35%), Positives = 95/169 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASF--H-VVITSYQLVVSDFKYFNR 58
+RF P+ ++ Y G+ QER+ L ++ +H + S H VVITS+++ + D
Sbjct: 290 KRFTPEIPLMLYHGAQQERRKL-----VRKIHGRQGSLKIHPVVITSFEIAMRDRNALQS 344
Query: 59 IKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAEL 118
W+YLI+DE I ++N + +++R F+ N+LLL+GTP+QN++AEL
Sbjct: 345 CFWKYLIVDEGHRIKNMNC-RLIRELKR-----------FNADNKLLLTGTPLQNNLAEL 392
Query: 119 WALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI--DEREYPIVLML 165
W+LL+F++P +FD F WF DI S E I E+E I+ ML
Sbjct: 393 WSLLNFLLPDVFDDLKSFESWF--DITSITETAEDIIAKEKEQNILHML 439
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 238 (88.8 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 53/124 (42%), Positives = 75/124 (60%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
K +FHV I SYQLVV D F R +WQY++LDEA N+ ++ +S RW+
Sbjct: 792 KPDAFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAH-----NIKNF-------RSTRWQA 839
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMP---------SMFDSHDEFNEWFSKDIE 145
LL F+ + RLLL+GTP+QN++AELW+LL+F+MP S F D F +WF + ++
Sbjct: 840 LLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVD 899
Query: 146 SHAE 149
E
Sbjct: 900 KIIE 903
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 234 (87.4 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 60/168 (35%), Positives = 91/168 (54%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFH---VVITSYQLVVSDFKYFNR 58
+RF P+ V+ Y G +ER L +K + S VV+TS+++ + D K+ R
Sbjct: 301 KRFTPEVSVLLYHGPQKERLDL-----VKKIRQHQGSLRMCPVVVTSFEIAMRDRKFLQR 355
Query: 59 IKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAEL 118
W YLI+DE I ++N + +E M N+LLL+GTP+QN+++EL
Sbjct: 356 FHWNYLIVDEGHRIKNLNCR-----LVQELKM-------LPTDNKLLLTGTPLQNNLSEL 403
Query: 119 WALLHFIMPSMFDSHDEFNEWFS-KDIESHAENKTSIDEREYPIVLML 165
W+LL+F++P +FD F WF I S AEN + +ERE I+ ML
Sbjct: 404 WSLLNFLLPDVFDDLKSFESWFDISTITSDAENIVA-NEREQNILHML 450
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 238 (88.8 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 55/164 (33%), Positives = 98/164 (59%)
Query: 4 FVPDFKVVPYWGSPQERKILRQF-WDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
+ PD VV Y G + R++++Q+ W ++ +K F+ ++T+Y++V+ D ++ ++W
Sbjct: 599 WAPDMNVVTYLGDIKSRELIQQYEWQFES--SKRLKFNCILTTYEIVLKDKQFLGTLQWA 656
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
L++DEA + ND S+ +K L F +RLL++GTP+QNS+ ELWALL
Sbjct: 657 ALLVDEAHRLK--------ND----DSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALL 704
Query: 123 HFIMPSMFDSHDEFNEWFSKDIE-SHAENK--TSIDEREYPIVL 163
HFIMP D+F+ W + +++ +AE+K T + ++ P +L
Sbjct: 705 HFIMP------DKFDTWENFEVQHGNAEDKGYTRLHQQLEPYIL 742
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 232 (86.7 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 58/168 (34%), Positives = 92/168 (54%)
Query: 2 ERFVPDFKVVPYWGSPQER-KILRQFWDMKNLHTKDASFH-VVITSYQLVVSDFKYFNRI 59
+RF PD + Y G+ +ER K++R + K H VVITS+++ + D
Sbjct: 291 KRFTPDIPTMLYHGTQEERQKLVRNIYKRKGT----LQIHPVVITSFEIAMRDRNALQHC 346
Query: 60 KWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELW 119
W+YLI+DE I ++ + +++R F+ N+LLL+GTP+QN+++ELW
Sbjct: 347 YWKYLIVDEGHRIKNMKC-RLIRELKR-----------FNADNKLLLTGTPLQNNLSELW 394
Query: 120 ALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI--DEREYPIVLML 165
+LL+F++P +FD F WF DI S +E I ERE ++ ML
Sbjct: 395 SLLNFLLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHML 440
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 232 (86.7 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 58/169 (34%), Positives = 94/169 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASF--H-VVITSYQLVVSDFKYFNR 58
+RF P+ + Y GS QER+ L + ++H + + H VVITS+++ + D
Sbjct: 291 QRFTPEIPTMLYHGSQQERRKL-----VNHIHKRKGTLQIHPVVITSFEIAMRDRNVLQH 345
Query: 59 IKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAEL 118
W+YLI+DE I ++ + +++R F+ N+LLL+GTP+QN+++EL
Sbjct: 346 CYWKYLIVDEGHRIKNMKC-RLIRELKR-----------FNADNKLLLTGTPLQNNLSEL 393
Query: 119 WALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI--DEREYPIVLML 165
W+LL+F++P +FD F WF DI S +E I ERE ++ ML
Sbjct: 394 WSLLNFLLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHML 440
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 230 (86.0 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 56/169 (33%), Positives = 95/169 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASF--H-VVITSYQLVVSDFKYFNR 58
+RF P+ + Y G+ ++R+ L +KN+H + + H VV+TS+++ + D
Sbjct: 274 KRFTPEIPTLLYHGTREDRRKL-----VKNIHKRQGTLQIHPVVVTSFEIAMRDQNALQH 328
Query: 59 IKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAEL 118
W+YLI+DE I ++ + +++R F+ N+LLL+GTP+QN+++EL
Sbjct: 329 CYWKYLIVDEGHRIKNMKC-RLIRELKR-----------FNADNKLLLTGTPLQNNLSEL 376
Query: 119 WALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI--DEREYPIVLML 165
W+LL+F++P +FD F WF DI S +E I ERE ++ ML
Sbjct: 377 WSLLNFLLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHML 423
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 233 (87.1 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 48/126 (38%), Positives = 79/126 (62%)
Query: 38 SFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLG 97
+F VVITS++ ++ D K R+ W Y+I+DE I + N S L+ ++ Q
Sbjct: 722 AFCVVITSFEYIIKDRKTLGRVHWIYIIIDEGHRIKNKN--SKLS-VQLRQ--------- 769
Query: 98 FSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDER 157
+ RNRLLL+GTP+QN + ELWALL+F++P++F+S D F WF+ ++ +N +++E
Sbjct: 770 YHSRNRLLLTGTPLQNDLGELWALLNFLLPTIFNSADTFQNWFNAPFQAKGKNLINVNEE 829
Query: 158 EYPIVL 163
E I++
Sbjct: 830 ESLIII 835
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 227 (85.0 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 55/157 (35%), Positives = 86/157 (54%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNR-IKW 61
RF P + Y G +R LR+ K + K F +VITSY++ ++D K R W
Sbjct: 271 RFTPSINAIIYHGDKNQRDELRRKHMPKTVGPK---FPIVITSYEVAMNDAKRILRHYPW 327
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+Y+++DE + + + + RE L N+LLL+GTP+QN+++ELW+L
Sbjct: 328 KYVVIDEGHRLKN-----HKCKLLRE-------LKHLKMDNKLLLTGTPLQNNLSELWSL 375
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDERE 158
L+FI+P +F SHDEF WF D +N+ + +E E
Sbjct: 376 LNFILPDIFTSHDEFESWF--DFSEKNKNEATKEEEE 410
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 217 (81.4 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 42/108 (38%), Positives = 70/108 (64%)
Query: 36 DASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLL 95
+A F V+ITSY++V+ + R+ WQY+++DEA I + EQS +++
Sbjct: 281 EARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRI------------KNEQSALSQII 328
Query: 96 LGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKD 143
F +NRLL++GTP+QN++ ELWALL+F++P +F + F+EWF ++
Sbjct: 329 RLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQN 376
Score = 39 (18.8 bits), Expect = 9.5e-18, Sum P(2) = 9.5e-18
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 142 KDIESHAENKTSIDE 156
KD H + +T ID+
Sbjct: 1104 KDTNDHVDKRTKIDQ 1118
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 231 (86.4 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 50/151 (33%), Positives = 92/151 (60%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQ--FWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+++P ++ Y G+ R++ +Q F++ K + + F+ ++T+Y++V+ D ++IK
Sbjct: 695 KWLPGMNIIVYVGTRASREVCQQYEFYNEKKVG-RPIKFNALLTTYEVVLKDKAVLSKIK 753
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W YL++DEA + + ++ + LL FS +N+LL++GTP+QNS+ ELWA
Sbjct: 754 WIYLMVDEAHRL------------KNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWA 801
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
LLHF+ P F + DEF E + K++ S E++
Sbjct: 802 LLHFLDPGKFKNKDEFVENY-KNLSSFNESE 831
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 220 (82.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 209 VCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 256
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 257 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 296
Score = 34 (17.0 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 133 HDEFNEWFSKDIESHAENKTSIDER 157
H + + SKD E E+ T+I ER
Sbjct: 583 HGATHVFASKDSELTEEDITTILER 607
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 226 (84.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 46/124 (37%), Positives = 79/124 (63%)
Query: 39 FHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGF 98
F VVI SY++++ + +I W+Y+I+DEA I + E+SM ++L F
Sbjct: 296 FDVVIASYEIIIREKSPLKKINWEYIIIDEAHRI------------KNEESMLSQVLREF 343
Query: 99 SCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDERE 158
+ RNRLL++GTP+QN++ ELWALL+F++P +F +F++WFS ES E++ I ++
Sbjct: 344 TSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSS--ESTEEDQDKIVKQL 401
Query: 159 YPIV 162
+ ++
Sbjct: 402 HTVL 405
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 225 (84.3 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 555 EIWAPEINVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 613
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 614 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 661
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 662 LHFIMPEKFEFWEDFEEDHGKGREN 686
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 225 (84.3 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 553 EIWAPEINVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 611
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 612 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSL 659
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 660 LHFIMPEKFEFWEDFEEDHGKGREN 684
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 225 (84.3 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 522 EIWAPEINVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 580
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 581 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSL 628
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 629 LHFIMPEKFEFWEDFEEDHGKGREN 653
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 225 (84.3 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 54/139 (38%), Positives = 81/139 (58%)
Query: 36 DASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLL 95
D S++V+ITSYQLV+ D + R W Y+ILDEA N+ ++ +S RW+ L
Sbjct: 922 DNSWNVLITSYQLVLQDQQVLKRRSWHYMILDEAH-----NIKNF-------RSQRWQAL 969
Query: 96 LGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHD--------EFNEWFSKDIESH 147
L F R RLLL+GTP+QN++ ELW+LL F+MP+ D F+EWF + +E
Sbjct: 970 LTFRTRARLLLTGTPLQNNLTELWSLLFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQI 1029
Query: 148 AEN-KTSIDEREYPIVLML 165
E+ + ++D+ +V L
Sbjct: 1030 LEHGRETMDDEAKQVVTKL 1048
Score = 139 (54.0 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+++ P FK++ Y+G+ +ER+ R+ W D S++V+ITSYQLV+ D + R W
Sbjct: 894 KKWCPGFKIMTYYGNQEERRQKRRGW------MDDNSWNVLITSYQLVLQDQQVLKRRSW 947
Query: 62 QYLILDEAQAI 72
Y+ILDEA I
Sbjct: 948 HYMILDEAHNI 958
Score = 36 (17.7 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 85 EREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNE 138
ER Q+M + F+C ++ + ++ + + H F HD F+E
Sbjct: 1302 ERSQAMDG-YIQRFACVTPAAVAAGVTEAALTPI-STRHLTNKERFPPHDPFHE 1353
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 225 (84.3 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 542 EIWAPEINVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 600
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 601 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 648
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 649 LHFIMPEKFEFWEDFEEDHGKGREN 673
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 225 (84.3 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 535 EIWAPEINVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 593
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 594 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 641
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 642 LHFIMPEKFEFWEDFEEDHGKGREN 666
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 225 (84.3 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 49/141 (34%), Positives = 79/141 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+ + PD VV Y G RK +R + + N TK F+ ++T+Y++++ D I W
Sbjct: 558 DTWAPDMNVVVYLGDVTSRKTIRDY-EWINPQTKRIKFNALLTTYEILLKDKGVLGNINW 616
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 617 AFLGVDEAHRLK--------ND----DSLLYKTLIDFRSNHRLLITGTPLQNSLKELWSL 664
Query: 122 LHFIMPSMFDSHDEFNEWFSK 142
LHF+M F+S ++F + K
Sbjct: 665 LHFLMSDKFESWEDFEDEHGK 685
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 225 (84.3 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 553 EIWAPEINVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 611
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 612 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 659
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 660 LHFIMPEKFEFWEDFEEDHGKGREN 684
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 225 (84.3 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 556 EIWAPEINVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 614
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 615 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSL 662
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 663 LHFIMPEKFEFWEDFEEDHGKGREN 687
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 225 (84.3 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 555 EIWAPEINVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 613
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 614 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 661
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 662 LHFIMPEKFEFWEDFEEDHGKGREN 686
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 225 (84.3 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 566 EIWAPEINVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 624
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 625 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSL 672
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 673 LHFIMPEKFEFWEDFEEDHGKGREN 697
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 223 (83.6 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 52/162 (32%), Positives = 92/162 (56%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQF-WDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
++ P+ +V Y G R ++RQ+ W + TK + ++T+Y++++ D + + I W
Sbjct: 475 QWAPEMNLVVYMGDVVSRDMIRQYEWFVGG--TKKMKINAILTTYEILLKDKAFLSSIDW 532
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
L++DEA + ND +S+ +K L F ++LL++GTP+QNS+ ELWAL
Sbjct: 533 AALLVDEAHRLK--------ND----ESLLYKSLTQFRFNHKLLITGTPLQNSLKELWAL 580
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVL 163
LHFIMP FD +EF + ES+ + +++ ++ P +L
Sbjct: 581 LHFIMPEKFDCWEEFETAHN---ESNHKGISALHKKLEPFLL 619
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 221 (82.9 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 57/157 (36%), Positives = 87/157 (55%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKWQ 62
P KV+ Y+GS +ERK +R N+H+K ++V++T+Y +S D F R+K
Sbjct: 569 PTLKVLCYYGSQEERKQIRY-----NIHSKYEEYNVIVTTYNCAISSSDDRSLFRRLKLN 623
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y I DE + ++ S+R++ L+ + NRLLL+GTP+QN++ EL +LL
Sbjct: 624 YAIFDEGHMLKNMG------------SIRYQHLMTINANNRLLLTGTPVQNNLLELMSLL 671
Query: 123 HFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+F+MP MF S E FS +S E SI E+E
Sbjct: 672 NFVMPHMFSSSTSEIRRMFSSKTKSADEQ--SIYEKE 706
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 221 (82.9 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 57/157 (36%), Positives = 87/157 (55%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKWQ 62
P KV+ Y+GS +ERK +R N+H+K ++V++T+Y +S D F R+K
Sbjct: 569 PTLKVLCYYGSQEERKQIRY-----NIHSKYEEYNVIVTTYNCAISSSDDRSLFRRLKLN 623
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y I DE + ++ S+R++ L+ + NRLLL+GTP+QN++ EL +LL
Sbjct: 624 YAIFDEGHMLKNMG------------SIRYQHLMTINANNRLLLTGTPVQNNLLELMSLL 671
Query: 123 HFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+F+MP MF S E FS +S E SI E+E
Sbjct: 672 NFVMPHMFSSSTSEIRRMFSSKTKSADEQ--SIYEKE 706
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 221 (82.9 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 57/157 (36%), Positives = 87/157 (55%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKWQ 62
P KV+ Y+GS +ERK +R N+H+K ++V++T+Y +S D F R+K
Sbjct: 569 PTLKVLCYYGSQEERKQIRY-----NIHSKYEEYNVIVTTYNCAISSSDDRSLFRRLKLN 623
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y I DE + ++ S+R++ L+ + NRLLL+GTP+QN++ EL +LL
Sbjct: 624 YAIFDEGHMLKNMG------------SIRYQHLMTINANNRLLLTGTPVQNNLLELMSLL 671
Query: 123 HFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+F+MP MF S E FS +S E SI E+E
Sbjct: 672 NFVMPHMFSSSTSEIRRMFSSKTKSADEQ--SIYEKE 706
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 221 (82.9 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 57/157 (36%), Positives = 87/157 (55%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKWQ 62
P KV+ Y+GS +ERK +R N+H+K ++V++T+Y +S D F R+K
Sbjct: 572 PTLKVLCYYGSQEERKQIRY-----NIHSKYEEYNVIVTTYNCAISSSDDRSLFRRLKLN 626
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y I DE + ++ S+R++ L+ + NRLLL+GTP+QN++ EL +LL
Sbjct: 627 YAIFDEGHMLKNMG------------SIRYQHLMTINANNRLLLTGTPVQNNLLELMSLL 674
Query: 123 HFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+F+MP MF S E FS +S E SI E+E
Sbjct: 675 NFVMPHMFSSSTSEIRRMFSSKTKSADEQ--SIYEKE 709
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 224 (83.9 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 51/145 (35%), Positives = 81/145 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R +R++ + + TK F+ +IT+Y++++ D I W
Sbjct: 560 EIWAPEVNVVVYIGDLMSRNTIREY-EWIHSQTKRLKFNALITTYEILLKDKTVLGSINW 618
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 619 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 666
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 667 LHFIMPEKFEFWEDFEEDHGKGREN 691
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 219 (82.2 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 335
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 336 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 375
Score = 111 (44.1 bits), Expect = 0.00058, P = 0.00058
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 255 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 307
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 308 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 350
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 223 (83.6 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 50/145 (34%), Positives = 82/145 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E + P+ VV Y G R ++R++ + + +K F+ +IT+Y++++ D I W
Sbjct: 555 EVWAPEINVVVYIGDLMSRNMIREY-EWIHSQSKRLKFNALITTYEILLKDKAVLGSISW 613
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+L +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+L
Sbjct: 614 AFLGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL 661
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIES 146
LHFIMP F+ ++F E K E+
Sbjct: 662 LHFIMPEKFEFWEDFEEDHGKGREN 686
>UNIPROTKB|J9NZH0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
Length = 850
Score = 219 (82.2 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 77 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 124
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 125 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 164
Score = 111 (44.1 bits), Expect = 0.00064, P = 0.00064
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 44 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 96
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 97 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 139
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 214 (80.4 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 267 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 314
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S ++F+ WF
Sbjct: 315 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWF 354
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 223 (83.6 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 51/147 (34%), Positives = 87/147 (59%)
Query: 3 RFVPDFKVVPYWGSPQERKILR--QFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ P V+ Y G+ Q R I+R +F+ L K +F+V++T+Y ++ D IK
Sbjct: 825 KWAPAMNVIVYTGTGQSRDIIRLYEFYTTNRLGKKKLNFNVLLTTYDFILKDKNTLGTIK 884
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W++L +DEA + N S L+++ KL ++ NRLL++GTP+QNS+ ELW
Sbjct: 885 WEFLAVDEAHRLK--NSESVLHEV-------LKL---YNTTNRLLVTGTPLQNSLKELWN 932
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESH 147
LL+F+MP+ F S +F + +S D++ +
Sbjct: 933 LLNFLMPNKFTSLKDFQDQYS-DLKEN 958
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 219 (82.2 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 264 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 311
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 312 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 351
Score = 111 (44.1 bits), Expect = 0.00078, P = 0.00078
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 231 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 283
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 284 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 326
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 218 (81.8 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 47/141 (33%), Positives = 81/141 (57%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
+F PD V+ Y+G+ ++ + +KN + +VITSY++++ D W+
Sbjct: 291 KFAPDLPVLKYYGTNGYKERSAK---LKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWK 347
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
+LI+DE + +IN + ++++ + NRLLL+GTP+QN++AELW+LL
Sbjct: 348 FLIVDEGHRLKNINC-RLIKELKK-----------INTSNRLLLTGTPLQNNLAELWSLL 395
Query: 123 HFIMPSMFDSHDEFNEWFSKD 143
+FIMP +F + FN+WF D
Sbjct: 396 NFIMPDIFADFEIFNKWFDFD 416
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 52/146 (35%), Positives = 85/146 (58%)
Query: 1 MERFVPDFKVVPYWGSPQERKI-LRQFWDMKNLHTKDA----SFHVVITSYQLVVSDFKY 55
++ +V +FK W P R + L D +N +D + V +TSY++ + +
Sbjct: 189 LQNWVNEFKK---W-CPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSV 244
Query: 56 FNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSM 115
F + W+YL++DEA I N S L++I RE F NRLL++GTP+QN++
Sbjct: 245 FKKFNWRYLVIDEAHRIK--NEKSKLSEILRE----------FKTANRLLITGTPLQNNL 292
Query: 116 AELWALLHFIMPSMFDSHDEFNEWFS 141
ELWALL+F++P +F+S ++F+EWF+
Sbjct: 293 HELWALLNFLLPDVFNSSEDFDEWFN 318
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 265 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 312
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 313 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 352
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 289 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 336
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 337 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 376
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 285 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 332
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 333 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 372
Score = 111 (44.1 bits), Expect = 0.00083, P = 0.00083
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 252 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 304
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 305 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 347
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 335
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 336 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 375
Score = 111 (44.1 bits), Expect = 0.00083, P = 0.00083
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 255 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 307
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 308 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 350
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 335
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 336 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 375
Score = 111 (44.1 bits), Expect = 0.00084, P = 0.00083
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 255 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 307
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 308 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 350
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 297 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 344
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 345 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 384
Score = 111 (44.1 bits), Expect = 0.00085, P = 0.00085
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 264 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 316
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 317 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 359
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 335
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 336 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 375
Score = 111 (44.1 bits), Expect = 0.00085, P = 0.00085
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 255 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 307
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 308 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 350
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 335
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 336 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 375
Score = 111 (44.1 bits), Expect = 0.00085, P = 0.00085
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 255 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 307
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 308 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 350
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 44/100 (44%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 285 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKS 332
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S D+F+ WF
Sbjct: 333 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF 372
Score = 111 (44.1 bits), Expect = 0.00085, P = 0.00085
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERK-ILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+R+VP +V+ + G R +R +M + V +TSY++V+ + F +
Sbjct: 252 KRWVPSLRVICFVGDKDARAAFIRD--EMM-----PGEWDVCVTSYEMVIKEKSVFKKFH 304
Query: 61 WQYLILDEAQAIVDINVYSYLNDIERE-QSMRWKLLLGFSCRNRL 104
W+YL++DEA I N S L++I RE +S LL G +N L
Sbjct: 305 WRYLVIDEAHRIK--NEKSKLSEIVREFKSTNRLLLTGTPLQNNL 347
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 221 (82.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 53/166 (31%), Positives = 97/166 (58%)
Query: 4 FVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS--DFKYFNRIKW 61
+ P + Y G+P ER R+ + + +H K F+V++T+Y+ +++ D ++I W
Sbjct: 825 WAPSIHKIVYCGTPDER---RKLFKEQIVHQK---FNVLLTTYEYLMNKHDRPKLSKIHW 878
Query: 62 QYLILDEAQAIVDINVYSYLN-DIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
Y+I+DE I N LN D++ S +RLLL+GTP+QN++ ELWA
Sbjct: 879 HYIIIDEGHRIK--NASCKLNADLKHYVSS-----------HRLLLTGTPLQNNLEELWA 925
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS---IDEREYPIVL 163
LL+F++P++F+S ++F++WF+K +S+ E+ + E E +++
Sbjct: 926 LLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLII 971
Score = 36 (17.7 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 149 ENKTSIDEREY-PI 161
EN S+D+++Y PI
Sbjct: 2174 ENAMSLDDKDYDPI 2187
>UNIPROTKB|H9L0N0 [details] [associations]
symbol:H9L0N0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02032856 EMBL:AADN02032857
EMBL:AADN02032858 EMBL:AADN02032859 EMBL:AADN02032860
EMBL:AADN02032861 EMBL:AADN02032862 EMBL:AADN02032863
EMBL:AADN02032864 EMBL:AADN02032865 Ensembl:ENSGALT00000023599
Uniprot:H9L0N0
Length = 1444
Score = 220 (82.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 47/145 (32%), Positives = 80/145 (55%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + P V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 224 IQTWAPQMNAVVYLGDITSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKSFLGGLN 282
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 283 WVFIGIDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 330
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 331 LLHFIMPEKFSSWEDFEEEHGKGRE 355
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 218 (81.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 57/157 (36%), Positives = 88/157 (56%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKWQ 62
P KV+ Y+GS +ERK +R F N+H++ ++V++T+Y +S D F R+K
Sbjct: 569 PTLKVLCYYGSQEERKQIR-F----NIHSRYEDYNVIVTTYNCAISSSDDRSLFRRLKLN 623
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y I DE + ++ S+R++ L+ + NRLLL+GTP+QN++ EL +LL
Sbjct: 624 YAIFDEGHMLKNMG------------SIRYQHLMTINANNRLLLTGTPVQNNLLELMSLL 671
Query: 123 HFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+F+MP MF S E FS +S E SI E+E
Sbjct: 672 NFVMPHMFSSSTSEIRRMFSSKTKSADEQ--SIYEKE 706
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 220 (82.5 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 47/145 (32%), Positives = 80/145 (55%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + P V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 545 IQTWAPQMNAVVYLGDITSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKSFLGGLN 603
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 604 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 651
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 652 LLHFIMPEKFSSWEDFEEEHGKGRE 676
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 218 (81.8 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 48/141 (34%), Positives = 83/141 (58%)
Query: 30 KNLH--TKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIERE 87
K LH + ++F V++T+Y+ ++ D +RIKW Y+I+DE + N S L +
Sbjct: 505 KALHPQVRHSNFQVLLTTYEYIIKDRPLLSRIKWIYMIIDEGHRMK--NTQSKLTNT--- 559
Query: 88 QSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDI-ES 146
L +S R RL+L+GTP+QN++ ELWALL+F++P +F+S F+EWF+ +
Sbjct: 560 ------LTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANT 613
Query: 147 HAENKTSIDEREYPIVLMLIY 167
++K + E E +V+ ++
Sbjct: 614 GGQDKMELTEEESLLVIRRLH 634
Score = 128 (50.1 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 34/105 (32%), Positives = 54/105 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
ER+ P + Y G PQ RK L + ++F V++T+Y+ ++ D +RIKW
Sbjct: 486 ERWAPSIVKIVYKGPPQVRKALHP-------QVRHSNFQVLLTTYEYIIKDRPLLSRIKW 538
Query: 62 QYLILDEAQAIVDINVYSYL-NDIEREQSMRWKLLL-GFSCRNRL 104
Y+I+DE + N S L N + S R++L+L G +N L
Sbjct: 539 IYMIIDEGHRMK--NTQSKLTNTLTTYYSSRYRLILTGTPLQNNL 581
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 56/157 (35%), Positives = 88/157 (56%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKWQ 62
P V+ Y+GS +ERK +R F N+H K ++V++T+Y +S D F R+K
Sbjct: 564 PSLNVLCYYGSQEERKQIR-F----NIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLN 618
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y I DE + ++ S+R++ L+ + RNRLLL+GTP+QN++ EL +LL
Sbjct: 619 YAIFDEGHMLKNMG------------SIRYQHLMTINARNRLLLTGTPVQNNLLELMSLL 666
Query: 123 HFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+F+MP MF S E FS ++ ++ SI E+E
Sbjct: 667 NFVMPHMFSSSTSEIRRMFSS--KTKPADEQSIYEKE 701
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 222 (83.2 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 47/129 (36%), Positives = 78/129 (60%)
Query: 39 FHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGF 98
F+ V+T+Y+ ++ D ++IKW YLI+DE + N S L+ I L +
Sbjct: 1811 FNAVVTTYEYIIKDKNALSKIKWNYLIVDEGHRMK--NYTSKLSII---------LGTSY 1859
Query: 99 SCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDERE 158
S R RLLL+GTP+QNS+ ELWALL+F++P++FD ++F +WF+ E K ++E E
Sbjct: 1860 SSRYRLLLTGTPLQNSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGE-KIEMNEEE 1918
Query: 159 YPIVLMLIY 167
+++ ++
Sbjct: 1919 QLLIIQRLH 1927
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 216 (81.1 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 56/157 (35%), Positives = 88/157 (56%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKWQ 62
P V+ Y+GS +ERK +R F N+H K ++V++T+Y +S D F R+K
Sbjct: 567 PTLNVLCYYGSQEERKQIR-F----NIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLN 621
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y I DE + ++ S+R++ L+ + RNRLLL+GTP+QN++ EL +LL
Sbjct: 622 YAIFDEGHMLKNMG------------SIRYQHLMTINARNRLLLTGTPVQNNLLELMSLL 669
Query: 123 HFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+F+MP MF S E FS ++ ++ SI E+E
Sbjct: 670 NFVMPHMFSSSTSEIRRMFSS--KTKPADEQSIYEKE 704
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 214 (80.4 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 3 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 50
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELW+LL+F++P +F+S D+F+ WF
Sbjct: 51 TNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF 90
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 215 (80.7 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 41/106 (38%), Positives = 69/106 (65%)
Query: 36 DASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLL 95
D SF V ITSY++++ + + + W+Y+I+DEA I + E+S +++
Sbjct: 283 DESFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRI------------KNEESSLAQVI 330
Query: 96 LGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFS 141
F+ RNRLL++GTP+QN++ ELWALL+F++P +F + F++WFS
Sbjct: 331 RLFNSRNRLLITGTPLQNNIHELWALLNFLLPDVFGDSEAFDQWFS 376
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 214 (80.4 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 54/157 (34%), Positives = 88/157 (56%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKWQ 62
P KV+ Y+GS +ERK +R N+H++ ++V++T+Y +S D F R+K
Sbjct: 571 PTLKVLCYYGSQEERKQIRY-----NIHSRYEEYNVIVTTYNCAISSSDDRSLFRRLKLN 625
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y I DE + ++ S+R++ L+ + NRLLL+GTP+QN++ EL +LL
Sbjct: 626 YAIFDEGHMLKNMG------------SIRYQHLMTINANNRLLLTGTPVQNNLLELMSLL 673
Query: 123 HFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+F+MP MF S E FS ++ ++ SI E+E
Sbjct: 674 NFVMPHMFSSSTSEIRRMFSS--KTKPADEQSIYEKE 708
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 214 (80.4 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 267 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 314
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S ++F+ WF
Sbjct: 315 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWF 354
>TAIR|locus:2054955 [details] [associations]
symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
Length = 877
Score = 213 (80.0 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 55/162 (33%), Positives = 88/162 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQ-FWDMKNLHTKD--ASFHVVITSYQLVVSDFKYFN 57
+ RF P+ +V+ Y G R +R+ +D +K F V++T+Y + + D + +
Sbjct: 120 INRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLTTYDIALVDQDFLS 179
Query: 58 RIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAE 117
+I WQY I+DEAQ + + N S L ++ EQ F RLL++GTPIQN++ E
Sbjct: 180 QIPWQYAIIDEAQRLKNPN--SVLYNVLLEQ---------FLIPRRLLITGTPIQNNLTE 228
Query: 118 LWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREY 159
LWAL+HF MP +F + D+F F + + + S D+ Y
Sbjct: 229 LWALMHFCMPLVFGTLDQFLSAFKETGDGLSGLDVSNDKETY 270
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 214 (80.4 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 281 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 328
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELW+LL+F++P +F+S D+F+ WF
Sbjct: 329 TNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF 368
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 214 (80.4 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 281 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 328
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELW+LL+F++P +F+S D+F+ WF
Sbjct: 329 TNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF 368
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 214 (80.4 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 329
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELW+LL+F++P +F+S D+F+ WF
Sbjct: 330 TNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF 369
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 214 (80.4 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 329
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELW+LL+F++P +F+S D+F+ WF
Sbjct: 330 TNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF 369
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 214 (80.4 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 329
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELW+LL+F++P +F+S D+F+ WF
Sbjct: 330 TNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF 369
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 214 (80.4 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 282 VCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 329
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELW+LL+F++P +F+S D+F+ WF
Sbjct: 330 TNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF 369
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 212 (79.7 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 547 IQTWASQMNAVVYLGDINSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKAFLGGLN 605
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 606 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 653
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 654 LLHFIMPEKFSSWEDFEEEHGKGRE 678
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 212 (79.7 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I R+ F
Sbjct: 288 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK--NEKSKLSEIVRD----------FKS 335
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S ++F+ WF
Sbjct: 336 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWF 375
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 213 (80.0 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 46/163 (28%), Positives = 87/163 (53%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+ + PD + Y G+ + R +R++ + +++ F++++T+Y+ ++ D + N I+
Sbjct: 458 LANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLTTYEYILKDKQELNNIR 517
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
WQYL +DEA + + +S ++ L F NRLL++GTP+QN++ EL +
Sbjct: 518 WQYLAIDEAHRL------------KNSESSLYETLSQFRTANRLLITGTPLQNNLKELAS 565
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVL 163
L++F+MP F DE N F + + + ER P +L
Sbjct: 566 LVNFLMPGKFYIRDELN--FDQPNAEQERDIRDLQERLQPFIL 606
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 211 (79.3 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 42/100 (42%), Positives = 65/100 (65%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++V+ + F + W+YL++DEA I N S L++I RE F
Sbjct: 245 VCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIK--NEKSKLSEIARE----------FKT 292
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELW+LL+F++P +F+S +F+ WF
Sbjct: 293 TNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSASDFDSWF 332
Score = 113 (44.8 bits), Expect = 0.00043, P = 0.00043
Identities = 34/104 (32%), Positives = 53/104 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+R+VP K V G+ ER + D+ + V +TSY++V+ + F + W
Sbjct: 212 KRWVPTLKAVCLIGNKDERAAFIR--DVM----MPGEWDVCVTSYEMVIREKSVFKKFNW 265
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
+YL++DEA I N S L++I RE +LLL G +N L
Sbjct: 266 RYLVIDEAHRIK--NEKSKLSEIAREFKTTNRLLLTGTPLQNNL 307
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 211 (79.3 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 46/149 (30%), Positives = 86/149 (57%)
Query: 28 DMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIERE 87
D+K F V IT+Y++ + + F + W+Y+I+DEA I + E
Sbjct: 365 DIKKNQLIFKKFDVCITTYEVAIREKSTFKKFSWRYIIIDEAHRI------------KNE 412
Query: 88 QSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESH 147
S+ K + F+ + RLL++GTP+QN++ ELW+LL+F++P +F S D+F++WF D+ ++
Sbjct: 413 NSVLSKGVRMFNSQFRLLITGTPLQNNLHELWSLLNFLLPDVFSSSDDFDKWF--DLANN 470
Query: 148 AENKTSIDEREYPIVL-MLIYSAHNKAEK 175
EN+ + ++ + ++ L+ + EK
Sbjct: 471 TENQQEVIDKLHKVLRPFLLRRIKTEVEK 499
Score = 112 (44.5 bits), Expect = 0.00074, P = 0.00074
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQ 62
R+ P +VV + GS +ER+ D+K F V IT+Y++ + + F + W+
Sbjct: 346 RWCPFLRVVRFHGSKEERE------DIKKNQLIFKKFDVCITTYEVAIREKSTFKKFSWR 399
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
Y+I+DEA I + N S L+ R + +++LL+ G +N L
Sbjct: 400 YIIIDEAHRIKNEN--SVLSKGVRMFNSQFRLLITGTPLQNNL 440
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 210 (79.0 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 42/100 (42%), Positives = 66/100 (66%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
V +TSY++++ + F + W+YL++DEA I N S L++I RE F
Sbjct: 265 VCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIK--NEKSKLSEIVRE----------FKT 312
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
NRLLL+GTP+QN++ ELWALL+F++P +F+S ++F+ WF
Sbjct: 313 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWF 352
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 549 IQTWASQMNAVVYLGDINSRNMIRTH-EWTHHQTKRLKFNILLTTYEILLKDKAFLGGLN 607
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 608 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 655
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 656 LLHFIMPEKFSSWEDFEEEHGKGRE 680
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 548 IQTWASQMNAVVYLGDINSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKAFLGGLN 606
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 607 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 654
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 655 LLHFIMPEKFSSWEDFEEEHGKGRE 679
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 547 IQTWASQMNAVVYLGDINSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKAFLGGLN 605
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 606 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 653
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 654 LLHFIMPEKFSSWEDFEEEHGKGRE 678
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 531 IQTWASQMNAVVYLGDINSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKAFLGGLN 589
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 590 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 637
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 638 LLHFIMPEKFSSWEDFEEEHGKGRE 662
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 543 IQTWASQMNAVVYLGDINSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKAFLGGLN 601
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 602 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 649
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 650 LLHFIMPEKFSSWEDFEEEHGKGRE 674
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 543 IQTWASQMNAVVYLGDINSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKAFLGGLN 601
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 602 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 649
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 650 LLHFIMPEKFSSWEDFEEEHGKGRE 674
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 212 (79.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 544 IQTWASQMNAVVYLGDINSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKAFLGGLN 602
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 603 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 650
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 651 LLHFIMPEKFSSWEDFEEEHGKGRE 675
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 212 (79.7 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 46/145 (31%), Positives = 79/145 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
++ + V Y G R ++R + + TK F++++T+Y++++ D + +
Sbjct: 561 IQTWASQMNAVVYLGDINSRNMIRTH-EWMHPQTKRLKFNILLTTYEILLKDKAFLGGLN 619
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W ++ +DEA + ND S+ +K L+ F +RLL++GTP+QNS+ ELW+
Sbjct: 620 WAFIGVDEAHRLK--------ND----DSLLYKTLIDFKSNHRLLITGTPLQNSLKELWS 667
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIE 145
LLHFIMP F S ++F E K E
Sbjct: 668 LLHFIMPEKFSSWEDFEEEHGKGRE 692
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 207 (77.9 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 40/133 (30%), Positives = 77/133 (57%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
K F+V++T+++ V+ + +++W+Y+I+DE + N + L ++ L
Sbjct: 461 KSGKFNVLLTTFEYVIREKALLGKLRWKYMIIDEGHRLK--NQHCKLTEM---------L 509
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
F C+ RLL++GTP+QN + ELWALL+F++PS+F S F +WF+ + E K +
Sbjct: 510 NTRFQCQRRLLITGTPLQNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTGE-KVEL 568
Query: 155 DEREYPIVLMLIY 167
+ E +++ ++
Sbjct: 569 TQEETMLIIRRLH 581
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 204 (76.9 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 43/122 (35%), Positives = 72/122 (59%)
Query: 37 ASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL 96
A F V+ITS+++++ + + +W+Y+++DEA I + E S K++
Sbjct: 237 AKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRI------------KNEDSSLSKIIR 284
Query: 97 GFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDE 156
F RNRLL++GTP+QN++ ELWALL+F++P +F D+F+E F +N +DE
Sbjct: 285 LFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDN------QNSEELDE 338
Query: 157 RE 158
E
Sbjct: 339 EE 340
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 204 (76.9 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 43/122 (35%), Positives = 72/122 (59%)
Query: 37 ASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL 96
A F V+ITS+++++ + + +W+Y+++DEA I + E S K++
Sbjct: 237 AKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRI------------KNEDSSLSKIIR 284
Query: 97 GFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDE 156
F RNRLL++GTP+QN++ ELWALL+F++P +F D+F+E F +N +DE
Sbjct: 285 LFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAFDN------QNSEELDE 338
Query: 157 RE 158
E
Sbjct: 339 EE 340
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 203 (76.5 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 44/124 (35%), Positives = 71/124 (57%)
Query: 39 FHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGF 98
F+V+IT Y L++ D + +I W Y+I+DE + + E ++ L G+
Sbjct: 485 FNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKN-----------HECALAKTLGTGY 533
Query: 99 SCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDERE 158
+ RLLL+GTPIQNS+ ELW+LL+F++P +F+S F EWF+ + + + DE E
Sbjct: 534 RIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPF-AECGSASLTDEEE 592
Query: 159 YPIV 162
I+
Sbjct: 593 LLII 596
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 202 (76.2 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 53/160 (33%), Positives = 90/160 (56%)
Query: 3 RFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRI 59
++ P ++ Y+GS +ERK LR +D+ N K F+V++T+Y +S D F R+
Sbjct: 543 QWCPSMNILLYYGSQEERKHLR--YDILN---KVVEFNVIVTTYNCAISSAEDRSLFRRL 597
Query: 60 KWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELW 119
K + + DE + +++ ++R++ L+ + R+RLLL+GTP+QN++ EL
Sbjct: 598 KLNFAVFDEGHMLKNMS------------AIRYQHLMTLNARSRLLLTGTPVQNNLLELM 645
Query: 120 ALLHFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+LL+F+MP MF S E FS +S E +I E+E
Sbjct: 646 SLLNFVMPHMFSSSTSEIKRLFSSKAKSTDEQ--TIFEKE 683
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 203 (76.5 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 51/163 (31%), Positives = 89/163 (54%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E++ PD V Y G+ + RK +R++ ++ N + K F+V++T+Y+ ++ D KW
Sbjct: 431 EKWAPDVNCVYYLGNGEARKTIREY-ELYNQNRKP-KFNVLLTTYEYILKDKNELGAFKW 488
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
Q+L +DEA + + +S ++ L GF NRLL++GTP+QN++ EL AL
Sbjct: 489 QFLAVDEAHRL------------KNAESSLYEALKGFKVSNRLLITGTPLQNNVKELAAL 536
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAENKTS-IDEREYPIVL 163
+F+MP F E + F + I+S E + ++ P +L
Sbjct: 537 CNFLMPGKFTIDQEID--F-ETIDSEQEQYIKDLQKKISPFIL 576
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 201 (75.8 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 48/140 (34%), Positives = 83/140 (59%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKWQ 62
P KV+ Y+GS ++RK LRQ ++ T F++++++Y L + D F ++K +
Sbjct: 520 PSLKVLIYYGSVEDRKYLRQ-----DILTGLIDFNIIVSTYNLTIGNDHDRSLFRKLKLK 574
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y + DE + ++N S+R++ L+ + +RLLL+GTP+QN++ EL +LL
Sbjct: 575 YAVFDEGHMLKNMN------------SLRYRHLMTINAEHRLLLTGTPLQNNLLELMSLL 622
Query: 123 HFIMPSMFDSH-DEFNEWFS 141
+FIMPSMF S + ++ FS
Sbjct: 623 NFIMPSMFSSSTSQISKMFS 642
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 201 (75.8 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 42/108 (38%), Positives = 66/108 (61%)
Query: 39 FHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGF 98
F V T+Y++++ ++ W+Y+I+DEA I N S L++ RE
Sbjct: 232 FDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIK--NEKSKLSETVRE----------L 279
Query: 99 SCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIES 146
+ NRLL++GTP+QN++ ELWALL+F++P +F S D+F+ WFS D S
Sbjct: 280 NSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMS 327
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 204 (76.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 43/138 (31%), Positives = 80/138 (57%)
Query: 39 FHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYL-NDIEREQSMRWKLLLG 97
F+V++T+Y+ ++ D +++ W+Y+I+DEAQ + D S L D++R
Sbjct: 1081 FNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRE--SVLARDLDR----------- 1127
Query: 98 FSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDE- 156
+ C+ RLLL+GTP+QN + ELW+LL+ ++P +FD+ F++WF++ + D+
Sbjct: 1128 YRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDW 1187
Query: 157 REYPIVLMLIYSAHNKAE 174
E +++I+ H E
Sbjct: 1188 LETEKKVIVIHRLHQILE 1205
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 202 (76.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 42/134 (31%), Positives = 79/134 (58%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ +F+V++T+Y+ V+ + +I+W+Y+I+DE + + N L +
Sbjct: 628 RKGAFNVLMTTYEYVIKEKALLGKIRWKYMIIDEGHRLKNHNCKLTL------------M 675
Query: 95 LLGF-SCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTS 153
L GF ++RLLL+GTP+QN + ELWALL+F++PS+F S F +WF+ + E K
Sbjct: 676 LNGFFHAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGE-KVE 734
Query: 154 IDEREYPIVLMLIY 167
+++ E +++ ++
Sbjct: 735 LNQEETMLIIRRLH 748
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 202 (76.2 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 41/134 (30%), Positives = 80/134 (59%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ ++F+V++T+++ ++ D +RIKW ++I+DE I N S L L
Sbjct: 964 RSSNFNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIK--NTQSKLTST---------L 1012
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDI-ESHAENKTS 153
+ + RL+L+GTP+QN++ ELWALL+F++P +F+S F+EWF+ + ++K
Sbjct: 1013 STYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIG 1072
Query: 154 IDEREYPIVLMLIY 167
++E E +++ ++
Sbjct: 1073 LNEEEALLIIKRLH 1086
Score = 116 (45.9 bits), Expect = 0.00029, P = 0.00029
Identities = 30/105 (28%), Positives = 55/105 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E++ P K + Y G PQ RK L+ + ++F+V++T+++ ++ D +RIKW
Sbjct: 938 EKWAPSVKKIAYKGPPQLRKTLQS-------QIRSSNFNVLLTTFEYIIKDRPLLSRIKW 990
Query: 62 QYLILDEAQAIVDINVYSYLND-IEREQSMRWKLLL-GFSCRNRL 104
++I+DE I N S L + +++L+L G +N L
Sbjct: 991 VHMIIDEGHRIK--NTQSKLTSTLSTYYHSQYRLILTGTPLQNNL 1033
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 200 (75.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 50/152 (32%), Positives = 89/152 (58%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHT-KDASFHVVITSYQLVVS--DFKYFNR 58
+ + P +V Y+G+ +ER+ LR +++K KD F+V++T+Y L+ + D + R
Sbjct: 611 QTWCPSLSIVRYYGNLREREELR--YELKKKRPGKD--FNVILTTYNLLFANNDRGFLKR 666
Query: 59 IKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAEL 118
+ +LILDEAQ +I+ S R+K + +RLLL+GTP+QN++ EL
Sbjct: 667 FDYSFLILDEAQ------------NIKNSDSKRYKNIFKIGAHHRLLLTGTPLQNNLYEL 714
Query: 119 WALLHFIMPSMFDSHDEFNEWFSKDIESHAEN 150
W+LL+F+MP +F S + N ++ +E + ++
Sbjct: 715 WSLLNFLMPHIFGSVKKDNYLLNQLLEYNGDD 746
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 197 (74.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 51/157 (32%), Positives = 95/157 (60%)
Query: 6 PDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVV---SDFKYFNRIKWQ 62
P FKV+ Y+GS +RK +R +++ N + +++++++Y L + SD F ++K +
Sbjct: 501 PSFKVLVYYGSADDRKYMR--YEILN---QIVEYNIIVSTYNLAIGNSSDRSLFCKLKLE 555
Query: 63 YLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALL 122
Y + DE + ++N S+R++ L+ + + RLLL+GTP+QN++ EL +LL
Sbjct: 556 YAVFDEGHLLKNMN------------SLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLL 603
Query: 123 HFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDERE 158
+FIMP+MF S + + FS ++S +E ++S ER+
Sbjct: 604 NFIMPNMFSSSTSQIAKMFS--MKS-SEEQSSF-ERD 636
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 196 (74.1 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 40/116 (34%), Positives = 70/116 (60%)
Query: 28 DMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIERE 87
D+ L ++ + ++++TSY++ + DF +I W+YLI+DE + +
Sbjct: 263 DIDLLQQQETT-NIILTSYEISIRDFNKLVKINWKYLIVDEGHRL------------KNS 309
Query: 88 QSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKD 143
Q + K+L + NRLLL+GTP+QN++ ELW+LL+FI+P +F + F +WF+ D
Sbjct: 310 QCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSLLNFILPDIFHDLELFQQWFNFD 365
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+ +F P KV Y G+ QER D+ L ++ + ++++TSY++ + DF +I
Sbjct: 242 IRKFAPKIKVTKYIGTKQERN------DIDLLQQQETT-NIILTSYEISIRDFNKLVKIN 294
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W+YLI+DE + N L I ++ ++ +LLL G +N L
Sbjct: 295 WKYLIVDEGHRLK--NSQCLLIKILKKLNVSNRLLLTGTPLQNNL 337
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 196 (74.1 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 40/116 (34%), Positives = 70/116 (60%)
Query: 28 DMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIERE 87
D+ L ++ + ++++TSY++ + DF +I W+YLI+DE + +
Sbjct: 263 DIDLLQQQETT-NIILTSYEISIRDFNKLVKINWKYLIVDEGHRL------------KNS 309
Query: 88 QSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKD 143
Q + K+L + NRLLL+GTP+QN++ ELW+LL+FI+P +F + F +WF+ D
Sbjct: 310 QCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSLLNFILPDIFHDLELFQQWFNFD 365
Score = 117 (46.2 bits), Expect = 0.00010, P = 0.00010
Identities = 32/105 (30%), Positives = 56/105 (53%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+ +F P KV Y G+ QER D+ L ++ + ++++TSY++ + DF +I
Sbjct: 242 IRKFAPKIKVTKYIGTKQERN------DIDLLQQQETT-NIILTSYEISIRDFNKLVKIN 294
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W+YLI+DE + N L I ++ ++ +LLL G +N L
Sbjct: 295 WKYLIVDEGHRLK--NSQCLLIKILKKLNVSNRLLLTGTPLQNNL 337
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 196 (74.1 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 52/157 (33%), Positives = 86/157 (54%)
Query: 6 PDFKVVPYW-GSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFNRIKW 61
P+ V+ Y+ GS ++RK LR D+ N + F+V++T+Y +S D F ++K
Sbjct: 505 PELNVLFYYVGSQEDRKHLRA--DISN---RVVDFNVIVTTYNCAISSSDDRSLFRKVKL 559
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
Y I DE + +++ S+R++ L+ + ++RLLL+GTP+QN++ EL +L
Sbjct: 560 NYAIFDEGHMLKNMS------------SVRYQQLMRINAKHRLLLTGTPVQNNLLELMSL 607
Query: 122 LHFIMPSMFDSH-DEFNEWFSKDIESHAENKTSIDER 157
L+F+MP MF S E FS ++ E T ER
Sbjct: 608 LNFVMPHMFSSSTSEIRRMFSSKAKTAEEQSTYEKER 644
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 198 (74.8 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 40/131 (30%), Positives = 78/131 (59%)
Query: 38 SFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLG 97
+F V++T+Y+ ++ D ++IKW ++I+DE + N S L+ +
Sbjct: 635 NFQVLLTTYEYIIKDRPILSKIKWTHMIVDEGHRMK--NTQSKLSSTLSQY--------- 683
Query: 98 FSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDI-ESHAENKTSIDE 156
++ R RL+L+GTP+QN++ ELWALL+F++P++F S F+EWF+ + +++ + E
Sbjct: 684 YTSRYRLILTGTPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTE 743
Query: 157 REYPIVLMLIY 167
E +V+ ++
Sbjct: 744 EEQLLVIRRLH 754
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 198 (74.8 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 42/134 (31%), Positives = 78/134 (58%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ +F +V+T+++ V+ D RIKW ++I+DE + + N S L++ L
Sbjct: 876 RTGNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNAN--SKLSET---------L 924
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDI-ESHAENKTS 153
+ RL+L+GTP+QN++ ELWALL+F++P +F+S F+EWF+ + ++K
Sbjct: 925 TQNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIE 984
Query: 154 IDEREYPIVLMLIY 167
+ E E +V+ ++
Sbjct: 985 LTEEETLLVIRRLH 998
Score = 120 (47.3 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 29/105 (27%), Positives = 59/105 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E++ P K + Y G+P +RK+++ D++ +F +V+T+++ V+ D RIKW
Sbjct: 850 EKWAPSIKKITYKGTPNQRKVMQH--DIRT-----GNFQLVLTTFEYVIKDKGLLGRIKW 902
Query: 62 QYLILDEAQAIVDINVYSYLND-IEREQSMRWKLLL-GFSCRNRL 104
++I+DE + + N S L++ + + ++L+L G +N L
Sbjct: 903 VHMIIDEGHRMKNAN--SKLSETLTQNYHSDYRLILTGTPLQNNL 945
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 198 (74.8 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 42/134 (31%), Positives = 78/134 (58%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ +F +V+T+++ V+ D RIKW ++I+DE + + N S L++ L
Sbjct: 876 RTGNFQLVLTTFEYVIKDKGLLGRIKWVHMIIDEGHRMKNAN--SKLSET---------L 924
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDI-ESHAENKTS 153
+ RL+L+GTP+QN++ ELWALL+F++P +F+S F+EWF+ + ++K
Sbjct: 925 TQNYHSDYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIE 984
Query: 154 IDEREYPIVLMLIY 167
+ E E +V+ ++
Sbjct: 985 LTEEETLLVIRRLH 998
Score = 120 (47.3 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 29/105 (27%), Positives = 59/105 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E++ P K + Y G+P +RK+++ D++ +F +V+T+++ V+ D RIKW
Sbjct: 850 EKWAPSIKKITYKGTPNQRKVMQH--DIRT-----GNFQLVLTTFEYVIKDKGLLGRIKW 902
Query: 62 QYLILDEAQAIVDINVYSYLND-IEREQSMRWKLLL-GFSCRNRL 104
++I+DE + + N S L++ + + ++L+L G +N L
Sbjct: 903 VHMIIDEGHRMKNAN--SKLSETLTQNYHSDYRLILTGTPLQNNL 945
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 195 (73.7 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 38/102 (37%), Positives = 62/102 (60%)
Query: 39 FHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGF 98
F + +TS+++ + + R W+Y+I+DEA I + E S+ K + F
Sbjct: 294 FDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRI------------KNENSLLSKTMRLF 341
Query: 99 SCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWF 140
S RLL++GTP+QN++ ELWALL+F++P +F S + F+EWF
Sbjct: 342 STNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEWF 383
Score = 119 (46.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 31/105 (29%), Positives = 55/105 (52%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+ RF P + V + G+P+ER+ +R+ L F + +TS+++ + + R
Sbjct: 262 IRRFCPVLRAVKFLGNPEERRHIRE-----ELLVA-GKFDICVTSFEMAIKEKTTLRRFS 315
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W+Y+I+DEA I + N S L+ R S ++LL+ G +N L
Sbjct: 316 WRYIIIDEAHRIKNEN--SLLSKTMRLFSTNYRLLITGTPLQNNL 358
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 197 (74.4 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 38/134 (28%), Positives = 76/134 (56%)
Query: 36 DASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLL 95
+ +F + IT++ LV+ + + +I W Y+++DE + + R+ +
Sbjct: 981 EQTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRM-------------KNNKSRFHVF 1027
Query: 96 LG-FSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
L F + R+LL+GTP+QN+++ELW+LL+F++P +F S +F +WF K + + + I
Sbjct: 1028 LSEFKSKYRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHI 1087
Query: 155 DEREYPIVLMLIYS 168
E E +++ ++S
Sbjct: 1088 TEEEQLLIINRLHS 1101
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 197 (74.4 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 38/134 (28%), Positives = 76/134 (56%)
Query: 36 DASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLL 95
+ +F + IT++ LV+ + + +I W Y+++DE + + R+ +
Sbjct: 981 EQTFDICITTFDLVIKEKSFLMKISWNYIVVDEGHRM-------------KNNKSRFHVF 1027
Query: 96 LG-FSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
L F + R+LL+GTP+QN+++ELW+LL+F++P +F S +F +WF K + + + I
Sbjct: 1028 LSEFKSKYRILLTGTPLQNNLSELWSLLNFLLPKIFSSCVDFEKWFVKSLHNEKDVYEHI 1087
Query: 155 DEREYPIVLMLIYS 168
E E +++ ++S
Sbjct: 1088 TEEEQLLIINRLHS 1101
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 195 (73.7 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 48/157 (30%), Positives = 84/157 (53%)
Query: 7 DFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLIL 66
D + Y G+ R+++R + + T+ F++++T+Y+ V+ D + IKWQY+ +
Sbjct: 449 DMNCISYLGNTTSRQVIRDY-EFYVDGTQKIKFNLLLTTYEYVLKDRSVLSNIKWQYMAI 507
Query: 67 DEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIM 126
DEA + + +S ++ L F NRLL++GTP+QN++ EL AL+ F+M
Sbjct: 508 DEAHRL------------KNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVDFLM 555
Query: 127 PSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVL 163
P F+ +E N + D E A + S+ E P +L
Sbjct: 556 PGKFEIREEIN-LEAPDEEQEAYIR-SLQEHLQPYIL 590
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 192 (72.6 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 101 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 149
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 150 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 208
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 209 NEEETILIIRRLH 221
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 192 (72.6 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 182 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 230
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 231 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 289
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 290 NEEETILIIRRLH 302
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 194 (73.4 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 42/129 (32%), Positives = 74/129 (57%)
Query: 39 FHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGF 98
F+V++T+Y+ V+ D +I+W+Y+I+DE + N + L + L +
Sbjct: 872 FNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMK--NHHCKLTQV---------LNTHY 920
Query: 99 SCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDERE 158
RLLL+GTP+QN + ELWALL+F++PS+F S F +WF+ + E K ++E E
Sbjct: 921 IAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEE 979
Query: 159 YPIVLMLIY 167
+++ ++
Sbjct: 980 TILIIRRLH 988
Score = 117 (46.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
E++ P VV Y GSPQ R++L+ M+ TK F+V++T+Y+ V+ D +I+W
Sbjct: 842 EKWAPAVGVVSYKGSPQGRRLLQN--QMRA--TK---FNVLLTTYEYVIKDKAVLAKIQW 894
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMR-WKLLL-GFSCRNRL 104
+Y+I+DE + N + L + + ++LLL G +N+L
Sbjct: 895 KYMIIDEGHRMK--NHHCKLTQVLNTHYIAPYRLLLTGTPLQNKL 937
Score = 35 (17.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 142 KDIESHAENKTSIDEREYP 160
+D E H + IDE E P
Sbjct: 1312 EDEEIHPGRERLIDESELP 1330
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 193 (73.0 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDAS---FHVVITSYQLVVSDFKYFNR 58
E++ PD + Y G+ + R +R++ N K F+V++T+Y+ ++ D
Sbjct: 445 EKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGS 504
Query: 59 IKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAEL 118
IKWQ++ +DEA + + +S ++ L F NR+L++GTP+QN++ EL
Sbjct: 505 IKWQFMAVDEAHRL------------KNAESSLYESLNSFKVANRMLITGTPLQNNIKEL 552
Query: 119 WALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYPIVL 163
AL++F+MP F E + F E E + R P +L
Sbjct: 553 AALVNFLMPGRFTIDQEID--FENQDEEQEEYIHDLHRRIQPFIL 595
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 192 (72.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 648 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 696
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 697 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 755
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 756 NEEETILIIRRLH 768
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 192 (72.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 841 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 889
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 890 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 948
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 949 NEEETILIIRRLH 961
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 192 (72.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 841 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 889
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 890 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 948
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 949 NEEETILIIRRLH 961
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 192 (72.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 849 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 897
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 898 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 956
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 957 NEEETILIIRRLH 969
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 192 (72.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 849 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 897
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 898 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 956
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 957 NEEETILIIRRLH 969
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 192 (72.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 849 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 897
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 898 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 956
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 957 NEEETILIIRRLH 969
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 192 (72.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 849 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 897
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 898 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 956
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 957 NEEETILIIRRLH 969
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 192 (72.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 849 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 897
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 898 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 956
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 957 NEEETILIIRRLH 969
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 192 (72.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 849 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 897
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 898 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 956
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 957 NEEETILIIRRLH 969
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 192 (72.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 849 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 897
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 898 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 956
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 957 NEEETILIIRRLH 969
>ASPGD|ASPL0000061821 [details] [associations]
symbol:AN10043 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001308 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EnsemblFungi:CADANIAT00002546 HOGENOM:HOG000175622 OMA:MEIEESV
Uniprot:C8VUX5
Length = 648
Score = 164 (62.8 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 36/130 (27%), Positives = 69/130 (53%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+ R+ + + Y G +ER+ LR + + +++V+T+Y+ + SD +F +
Sbjct: 58 ISRWTTGLRPMAYHGGSEERENLRTCFRQQGAEP----WNIVVTTYETLCSDLWFFQKTL 113
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W +++LDE I + +S R + + NR++L+GTPIQN + ELW+
Sbjct: 114 WAHVVLDEGHRI------------KNSRSKRTQGVYRLRSENRIVLTGTPIQNDLTELWS 161
Query: 121 LLHFIMPSMF 130
+LH++ P +F
Sbjct: 162 ILHWLYPDVF 171
Score = 46 (21.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 125 IMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
I+P FD+ D N F + S+A ++ SI
Sbjct: 513 IIPRSFDAKDLVNSDFHSIMSSYALDEVSI 542
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 192 (72.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD-------MKNLHTKDAS--FHVVITSYQL 48
E + PD VV Y G R I+R+ F D + K+AS FHV++TSY+L
Sbjct: 788 EMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYEL 847
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 848 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 895
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 896 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 937
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 192 (72.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD-------MKNLHTKDAS--FHVVITSYQL 48
E + PD VV Y G R I+R+ F D + K+AS FHV++TSY+L
Sbjct: 795 EMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYEL 854
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 855 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 902
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 944
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 192 (72.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD-------MKNLHTKDAS--FHVVITSYQL 48
E + PD VV Y G R I+R+ F D + K+AS FHV++TSY+L
Sbjct: 795 EMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYEL 854
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 855 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 902
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 944
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 192 (72.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD-------MKNLHTKDAS--FHVVITSYQL 48
E + PD VV Y G R I+R+ F D + K+AS FHV++TSY+L
Sbjct: 795 EMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYEL 854
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 855 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 902
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 903 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 944
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 192 (72.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD-------MKNLHTKDAS--FHVVITSYQL 48
E + PD VV Y G R I+R+ F D + K+AS FHV++TSY+L
Sbjct: 788 EMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYEL 847
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 848 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 895
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 896 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 937
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 192 (72.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD-------MKNLHTKDAS--FHVVITSYQL 48
E + PD VV Y G R I+R+ F D + K+AS FHV++TSY+L
Sbjct: 788 EMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYEL 847
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 848 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 895
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 896 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 937
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 191 (72.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 40/133 (30%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V+IT+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 821 RSGKFNVLITTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 869
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ RLLL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 870 NTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 928
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 929 NEEETILIIRRLH 941
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 192 (72.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD-------MKNLHTKDAS--FHVVITSYQL 48
E + PD VV Y G R I+R+ F D + K+AS FHV++TSY+L
Sbjct: 815 EMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYEL 874
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 875 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 922
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 923 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 964
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 192 (72.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD-------MKNLHTKDAS--FHVVITSYQL 48
E + PD VV Y G R I+R+ F D + K+AS FHV++TSY+L
Sbjct: 817 EMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYEL 876
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 877 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 924
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 925 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 966
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 192 (72.6 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 56/163 (34%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD-------MKNLHTKDAS--FHVVITSYQL 48
E + PD VV Y G R I+R+ F D + K+AS FHV++TSY+L
Sbjct: 816 EMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYEL 875
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 876 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 923
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 924 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 965
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 190 (71.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 38/133 (28%), Positives = 75/133 (56%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D + +++W+Y+I+DE + N + L + L
Sbjct: 861 RSGKFNVLVTTYEYIIKDKQVLAKLRWKYMIVDEGHRMK--NHHCKLTQV---------L 909
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E K +
Sbjct: 910 NTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDL 968
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 969 NEEETILIIRRLH 981
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 190 (71.9 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 56/163 (34%), Positives = 84/163 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWDMKNLHTKDAS---------FHVVITSYQL 48
E + PD VV Y G R I+R+ F D K AS FHV++TSY+L
Sbjct: 765 EMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFHVLLTSYEL 824
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W LI+DEA + + QS +++L G+S +++LLL+G
Sbjct: 825 ITIDMAILGSIDWACLIVDEAHRL------------KNNQSKFFRVLNGYSLQHKLLLTG 872
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 873 TPLQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DIAKEDQIK 914
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 188 (71.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 45/132 (34%), Positives = 76/132 (57%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+ RF P +V PY+GS QER +R+ + + + +++T+YQL ++ + + +K
Sbjct: 617 LARFCPSLRVEPYYGSQQERANIREA-----IEENEIKYDILVTTYQLATNNKEDRSFLK 671
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
Q D+ VY + ++ S R+K L+ + RLLL+GTP+QN++ EL +
Sbjct: 672 HQNF---------DVCVYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQNNLKELVS 722
Query: 121 LLHFIMPSMFDS 132
LL FI+P+MFDS
Sbjct: 723 LLAFILPNMFDS 734
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 187 (70.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 40/131 (30%), Positives = 78/131 (59%)
Query: 38 SFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLG 97
+F V++T+Y+ V+ + + + ++I+DE + N S L+ Q++R
Sbjct: 598 NFQVLLTTYEYVIRERPMLAKFHYSHMIIDEGHRMK--NAQSKLS-----QTLRTY---- 646
Query: 98 FSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDI-ESHAENKTSIDE 156
+ +NRL+L+GTP+QN++ ELWALL+F++P +F+S F++WF+ + A+ K + E
Sbjct: 647 YKTKNRLILTGTPLQNNLPELWALLNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIELTE 706
Query: 157 REYPIVLMLIY 167
E +V+ ++
Sbjct: 707 EESLLVIRRLH 717
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 187 (70.9 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 38/131 (29%), Positives = 75/131 (57%)
Query: 38 SFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLG 97
+F V++T+Y+ ++ D ++ W ++I+DE + N S L+ + +
Sbjct: 568 NFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMK--NAQSKLS---------FTISHY 616
Query: 98 FSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDI-ESHAENKTSIDE 156
+ RNRL+L+GTP+QN++ ELWALL+F++P +F+S F +WF+ + + K + E
Sbjct: 617 YRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTE 676
Query: 157 REYPIVLMLIY 167
E +++ ++
Sbjct: 677 EETLLIIRRLH 687
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 187 (70.9 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 44/123 (35%), Positives = 72/123 (58%)
Query: 31 NLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSM 90
N + + F V++T+Y++V+ D I W +L++DEA I N S L+ S+
Sbjct: 413 NRNLLHSDFDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIK--NEKSVLSS-----SV 465
Query: 91 RWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAEN 150
R+ NRLL++GTP+ N++ ELW+LL+F+MP +FD+ +EF+ F+ S +N
Sbjct: 466 RF-----LRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDN 520
Query: 151 KTS 153
K S
Sbjct: 521 KQS 523
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 187 (70.9 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 44/123 (35%), Positives = 72/123 (58%)
Query: 31 NLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSM 90
N + + F V++T+Y++V+ D I W +L++DEA I N S L+ S+
Sbjct: 413 NRNLLHSDFDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIK--NEKSVLSS-----SV 465
Query: 91 RWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAEN 150
R+ NRLL++GTP+ N++ ELW+LL+F+MP +FD+ +EF+ F+ S +N
Sbjct: 466 RF-----LRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDN 520
Query: 151 KTS 153
K S
Sbjct: 521 KQS 523
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 187 (70.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 826 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 874
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 875 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 933
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 934 NEEETILIIRRLH 946
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 187 (70.9 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 793 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 841
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 842 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 900
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 901 NEEETILIIRRLH 913
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 187 (70.9 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 801 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 849
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 850 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 908
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 909 NEEETILIIRRLH 921
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 187 (70.9 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 803 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 851
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 852 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 910
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 911 NEEETILIIRRLH 923
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 187 (70.9 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 803 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 851
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 852 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 910
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 911 NEEETILIIRRLH 923
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 187 (70.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 803 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 851
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 852 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 910
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 911 NEEETILIIRRLH 923
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 187 (70.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 824 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 872
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 873 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 931
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 932 NEEETILIIRRLH 944
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 187 (70.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 819 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 867
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 868 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 926
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 927 NEEETILIIRRLH 939
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 187 (70.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 38/133 (28%), Positives = 74/133 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+V++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 826 RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 874
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 875 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 933
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 934 NEEETILIIRRLH 946
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 187 (70.9 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 40/139 (28%), Positives = 77/139 (55%)
Query: 30 KNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQS 89
K + F VV+T+++ ++ + +++KW ++I+DE + N S L+
Sbjct: 857 KQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMK--NAQSKLS------- 907
Query: 90 MRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDI-ESHA 148
L + RL+L+GTP+QN++ ELWALL+F++P +F+S F+EWF+ +
Sbjct: 908 --LTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGG 965
Query: 149 ENKTSIDEREYPIVLMLIY 167
++K + E E +V+ ++
Sbjct: 966 QDKIELSEEETLLVIRRLH 984
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 181 (68.8 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 42/131 (32%), Positives = 74/131 (56%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+++ FHV++T+Y++ + D + W L++DEA + + + S+ K
Sbjct: 144 QESGFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRL------------KNQNSLLHKS 191
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSK--DIESHAENKT 152
L FS RLLL+GTPIQNS+ EL++LL F+ P +F S +E ++ + DIE +E+ +
Sbjct: 192 LSEFSVAFRLLLTGTPIQNSLQELYSLLSFVEPDLF-SKEEVEDFVQRYEDIEKESESAS 250
Query: 153 SIDEREYPIVL 163
+ + P +L
Sbjct: 251 ELYKLLQPFLL 261
Score = 129 (50.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 35/105 (33%), Positives = 57/105 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
MER P V Y G +ER L+Q D+K +++ FHV++T+Y++ + D +
Sbjct: 116 MERCAPGLCCVTYAGDKEERAHLQQ--DLK----QESGFHVLLTTYEICLKDASFLKSFP 169
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W L++DEA + + N S L+ E S+ ++LLL G +N L
Sbjct: 170 WSVLVVDEAHRLKNQN--SLLHKSLSEFSVAFRLLLTGTPIQNSL 212
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 181 (68.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD------MKNLHTK---DASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K K FHV++TSY+L
Sbjct: 152 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYEL 211
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 212 ITIDQAILGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 259
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 260 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 301
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 183 (69.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 37/133 (27%), Positives = 73/133 (54%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+ F+ ++T+Y+ ++ D +I+W+Y+I+DE + N + L + L
Sbjct: 826 RSGKFNALLTTYEYIIKDKHILAKIRWKYMIVDEGHRMK--NHHCKLTQV---------L 874
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI 154
+ R+LL+GTP+QN + ELWALL+F++P++F S F +WF+ E + +
Sbjct: 875 NTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDL 933
Query: 155 DEREYPIVLMLIY 167
+E E +++ ++
Sbjct: 934 NEEETILIIRRLH 946
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 183 (69.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWDM-----KNLHT--KDAS--FHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K + K+A FHV++TSY+L
Sbjct: 701 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYEL 760
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 761 ITIDQAVLGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 808
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 809 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 850
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 181 (68.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD------MKNLHTK---DASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K K FHV++TSY+L
Sbjct: 743 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYEL 802
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 803 ITIDQAILGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 850
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 851 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 892
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 181 (68.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD------MKNLHTK---DASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K K FHV++TSY+L
Sbjct: 769 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYEL 828
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 829 ITIDQAILGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 876
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 877 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 918
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 184 (69.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 45/142 (31%), Positives = 77/142 (54%)
Query: 7 DFKVVPYWGSPQERKILRQ---FWDMKNLHTKD-----ASFHVVITSYQLVVSDFKYFNR 58
D + Y GS R++L+Q F+D ++ K+ +IT+++ VVSD ++ +
Sbjct: 1269 DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKK 1328
Query: 59 IKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAEL 118
I W+ ++DEA + + N +N LL F +R+LL+GTP+QN++ EL
Sbjct: 1329 IPWRVCVIDEAHRLKNRNCKLLVNG-----------LLAFRMEHRVLLTGTPLQNNIDEL 1377
Query: 119 WALLHFIMPSMFDSHDEFNEWF 140
++LL+F+ P FD+ F E F
Sbjct: 1378 FSLLNFLHPQQFDNSATFLEQF 1399
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 181 (68.8 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD------MKNLHTK---DASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K K FHV++TSY+L
Sbjct: 685 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYEL 744
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 745 ITIDQAILGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 792
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 793 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 834
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 181 (68.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD------MKNLHTK---DASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K K FHV++TSY+L
Sbjct: 701 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYEL 760
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 761 ITIDQAILGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 808
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 809 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 850
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 181 (68.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD------MKNLHTK---DASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K K FHV++TSY+L
Sbjct: 632 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYEL 691
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 692 ITIDQAILGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 739
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 740 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 781
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 181 (68.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD------MKNLHTK---DASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K K FHV++TSY+L
Sbjct: 715 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYEL 774
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 775 ITIDQAILGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 822
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 823 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 864
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 181 (68.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD------MKNLHTK---DASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K K FHV++TSY+L
Sbjct: 767 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYEL 826
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 827 ITIDQAILGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 874
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 875 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 916
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 181 (68.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD------MKNLHTK---DASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D K K FHV++TSY+L
Sbjct: 769 EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYEL 828
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L + +LLL+G
Sbjct: 829 ITIDQAILGSIEWACLVVDEAHRL------------KNNQSKFFRVLNSYKIDYKLLLTG 876
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 877 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 918
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 180 (68.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
+ + P F VV Y G R I+R+ F D K FHV++TSY+L
Sbjct: 761 QMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYEL 820
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L G+ ++LLL+G
Sbjct: 821 ITIDQAALGSIRWACLVVDEAHRL------------KNNQSKFFRVLNGYKIDHKLLLTG 868
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 869 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 910
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 41/131 (31%), Positives = 73/131 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+++ FHV++T+Y++ + D + W L++DEA + + + S+ K
Sbjct: 142 QESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRL------------KNQSSLLHKT 189
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSK--DIESHAENKT 152
L FS LLL+GTPIQNS+ EL++LL F+ P +F S +E ++ + DIE +E+ +
Sbjct: 190 LSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLF-SKEEVGDFIQRYQDIEKESESAS 248
Query: 153 SIDEREYPIVL 163
+ + P +L
Sbjct: 249 ELHKLLQPFLL 259
Score = 133 (51.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
M+RF P V Y G +ER L+Q D+K +++ FHV++T+Y++ + D +
Sbjct: 114 MQRFAPGLSCVTYAGDKEERACLQQ--DLK----QESRFHVLLTTYEICLKDASFLKSFP 167
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W L++DEA + N S L+ E S+ + LLL G +N L
Sbjct: 168 WSVLVVDEAHRLK--NQSSLLHKTLSEFSVVFSLLLTGTPIQNSL 210
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
+ + P F VV Y G R I+R+ F D K FHV++TSY+L
Sbjct: 801 QMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYEL 860
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L G+ ++LLL+G
Sbjct: 861 ITIDQAALGSIRWACLVVDEAHRL------------KNNQSKFFRVLNGYKIDHKLLLTG 908
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 909 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 950
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
+ + P F VV Y G R I+R+ F D K FHV++TSY+L
Sbjct: 803 QMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYEL 862
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L G+ ++LLL+G
Sbjct: 863 ITIDQAALGSIRWACLVVDEAHRL------------KNNQSKFFRVLNGYKIDHKLLLTG 910
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 911 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 952
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
+ + P F VV Y G R I+R+ F D K FHV++TSY+L
Sbjct: 805 QMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYEL 864
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L G+ ++LLL+G
Sbjct: 865 ITIDQAALGSIRWACLVVDEAHRL------------KNNQSKFFRVLNGYKIDHKLLLTG 912
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 954
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
+ + P F VV Y G R I+R+ F D K FHV++TSY+L
Sbjct: 805 QMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYEL 864
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L G+ ++LLL+G
Sbjct: 865 ITIDQAALGSIRWACLVVDEAHRL------------KNNQSKFFRVLNGYKIDHKLLLTG 912
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 954
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 180 (68.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
+ + P F VV Y G R I+R+ F D K FHV++TSY+L
Sbjct: 856 QMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYEL 915
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L G+ ++LLL+G
Sbjct: 916 ITIDQAALGSIRWACLVVDEAHRL------------KNNQSKFFRVLNGYKIDHKLLLTG 963
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 964 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 1005
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 180 (68.4 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
+ + P F VV Y G R I+R+ F D K FHV++TSY+L
Sbjct: 856 QMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYEL 915
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L G+ ++LLL+G
Sbjct: 916 ITIDQAALGSIRWACLVVDEAHRL------------KNNQSKFFRVLNGYKIDHKLLLTG 963
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 964 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 1005
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 180 (68.4 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 51/163 (31%), Positives = 82/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
+ + P F VV Y G R I+R+ F D K FHV++TSY+L
Sbjct: 864 QMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYEL 923
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I+W L++DEA + + QS +++L G+ ++LLL+G
Sbjct: 924 ITIDQAALGSIRWACLVVDEAHRL------------KNNQSKFFRVLNGYKIDHKLLLTG 971
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 972 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DISKEDQIK 1013
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 176 (67.0 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 48/151 (31%), Positives = 78/151 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
++F P K+ PY+GS QER+ LR L + V++T+Y L + K+
Sbjct: 640 QKFAPALKIEPYYGSLQEREELRDI-----LERNAGKYDVIVTTYNLAAGN-------KY 687
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
L ++ VY + ++ S R+ L+ RLLL+GTP+QN++ EL +L
Sbjct: 688 DVSFLKNRN--FNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSL 745
Query: 122 LHFIMPSMFDSHDE-FNEWFSKDIESHAENK 151
L FIMP++F S E F+ F + ++ +NK
Sbjct: 746 LEFIMPNLFISKKESFDAIFKQRAKTTDDNK 776
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 170 (64.9 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 40/107 (37%), Positives = 63/107 (58%)
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W+YLI+DE I ++ + +++R F+ N+LLL+GTP+QN+++ELW+
Sbjct: 4 WKYLIVDEGHRIKNMKC-RLIRELKR-----------FNADNKLLLTGTPLQNNLSELWS 51
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSI--DEREYPIVLML 165
LL+F++P +FD F WF DI S +E I ERE ++ ML
Sbjct: 52 LLNFLLPDVFDDLKSFESWF--DITSLSETAEDIIAKEREQNVLHML 96
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 166 (63.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 46/151 (30%), Positives = 85/151 (56%)
Query: 7 DFKVVPYWGSPQERKILRQFWDM--KNLHTKDAS----FHVVITSYQLVVSDFKYFNRIK 60
+ + Y GS R++++Q+ +M ++ S FHVVIT+++++++D +I
Sbjct: 533 EMNAIVYHGSQISRQMIQQY-EMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIH 591
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W +I+DEA + + N L + KL+ + +++LL+GTP+QNS+ EL++
Sbjct: 592 WSCVIIDEAHRLKNRNC-KLLEGL--------KLM---ALEHKVLLTGTPLQNSVEELFS 639
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
LL+F+ PS F S F E F D+++ + K
Sbjct: 640 LLNFLEPSQFPSETAFLEEFG-DLKTEEQVK 669
Score = 43 (20.2 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIYSA-HNKAEK 175
+ W KDI +H K ++E++ ++ +L+Y H K ++
Sbjct: 1109 WGRW--KDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDE 1149
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 166 (63.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 46/151 (30%), Positives = 85/151 (56%)
Query: 7 DFKVVPYWGSPQERKILRQFWDM--KNLHTKDAS----FHVVITSYQLVVSDFKYFNRIK 60
+ + Y GS R++++Q+ +M ++ S FHVVIT+++++++D +I
Sbjct: 533 EMNAIVYHGSQISRQMIQQY-EMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIH 591
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W +I+DEA + + N L + KL+ + +++LL+GTP+QNS+ EL++
Sbjct: 592 WSCVIIDEAHRLKNRNC-KLLEGL--------KLM---ALEHKVLLTGTPLQNSVEELFS 639
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
LL+F+ PS F S F E F D+++ + K
Sbjct: 640 LLNFLEPSQFPSETAFLEEFG-DLKTEEQVK 669
Score = 43 (20.2 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIYSA-HNKAEK 175
+ W KDI +H K ++E++ ++ +L+Y H K ++
Sbjct: 1109 WGRW--KDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDE 1149
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 166 (63.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 46/151 (30%), Positives = 85/151 (56%)
Query: 7 DFKVVPYWGSPQERKILRQFWDM--KNLHTKDAS----FHVVITSYQLVVSDFKYFNRIK 60
+ + Y GS R++++Q+ +M ++ S FHVVIT+++++++D +I
Sbjct: 533 EMNAIVYHGSQISRQMIQQY-EMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIH 591
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W +I+DEA + + N L + KL+ + +++LL+GTP+QNS+ EL++
Sbjct: 592 WSCVIIDEAHRLKNRNC-KLLEGL--------KLM---ALEHKVLLTGTPLQNSVEELFS 639
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
LL+F+ PS F S F E F D+++ + K
Sbjct: 640 LLNFLEPSQFPSETAFLEEFG-DLKTEEQVK 669
Score = 43 (20.2 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIYSA-HNKAEK 175
+ W KDI +H K ++E++ ++ +L+Y H K ++
Sbjct: 1109 WGRW--KDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDE 1149
>SGD|S000006003 [details] [associations]
symbol:MOT1 "Essential protein involved in regulation of
transcription" species:4932 "Saccharomyces cerevisiae" [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0000228 "nuclear chromosome" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045898 "regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IMP;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000006003 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003677 GO:GO:0016887 EMBL:BK006949
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:U41849 GO:GO:0000228 GO:GO:0006364
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0042790 GO:GO:0045898 OrthoDB:EOG44XNQZ
EMBL:M83224 PIR:S22775 RefSeq:NP_015243.1 ProteinModelPortal:P32333
SMR:P32333 DIP:DIP-2418N IntAct:P32333 MINT:MINT-623118
STRING:P32333 PaxDb:P32333 PeptideAtlas:P32333 PRIDE:P32333
EnsemblFungi:YPL082C GeneID:856023 KEGG:sce:YPL082C CYGD:YPL082c
GeneTree:ENSGT00630000089754 NextBio:980935 Genevestigator:P32333
GermOnline:YPL082C Uniprot:P32333
Length = 1867
Score = 177 (67.4 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 39/124 (31%), Positives = 66/124 (53%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
+++TSY + +D N+ ++ Y +LDE I + QS K + +
Sbjct: 1382 IIVTSYDVARNDLAVLNKTEYNYCVLDEGHII------------KNSQSKLAKAVKEITA 1429
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREYP 160
+RL+L+GTPIQN++ ELW+L F+MP + F E F+K I + +KTS E+E
Sbjct: 1430 NHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAG 1489
Query: 161 IVLM 164
++ +
Sbjct: 1490 VLAL 1493
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 166 (63.5 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 46/151 (30%), Positives = 85/151 (56%)
Query: 7 DFKVVPYWGSPQERKILRQFWDM--KNLHTKDAS----FHVVITSYQLVVSDFKYFNRIK 60
+ + Y GS R++++Q+ +M ++ S FHVVIT+++++++D +I
Sbjct: 532 EMNAIVYHGSQISRQMIQQY-EMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIH 590
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W +I+DEA + + N L + KL+ + +++LL+GTP+QNS+ EL++
Sbjct: 591 WSCVIIDEAHRLKNRNC-KLLEGL--------KLM---ALEHKVLLTGTPLQNSVEELFS 638
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
LL+F+ PS F S F E F D+++ + K
Sbjct: 639 LLNFLEPSQFPSETAFLEEFG-DLKTEEQVK 668
Score = 43 (20.2 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIYSA-HNKAEK 175
+ W KDI +H K ++E++ ++ +L+Y H K ++
Sbjct: 1108 WGRW--KDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDE 1148
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 179 (68.1 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 46/143 (32%), Positives = 78/143 (54%)
Query: 9 KVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDE 68
K + ++GS + R + ++ + K H F V++T+Y+ ++SD F R+ W+ LILDE
Sbjct: 973 KTLVFYGSQETRGFISKY-EFK--HKDTYLFEVLLTTYETIMSDHSSFVRVPWRALILDE 1029
Query: 69 AQAIVD--INVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIM 126
I + V S L I+ E S ++L+GTP+QN M ELW +L+F+
Sbjct: 1030 GHRIKNDKSKVLSKLKSIKTEHS--------------IILTGTPLQNDMKELWTMLNFLD 1075
Query: 127 PSMFDSHDEFNEWFSKDIESHAE 149
P F+S EF + +S D++ ++
Sbjct: 1076 PDKFNSCQEFLDEYS-DLKEESQ 1097
>UNIPROTKB|Q47YP1 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 174 (66.3 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 42/165 (25%), Positives = 79/165 (47%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+++F P G+ + QF ++ + + ++ITSY L+ D ++ K
Sbjct: 730 IDKFTPQLSYQVLHGNKRHE----QFGCLEGVENGENQVDIIITSYALITKDLAHYTDRK 785
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
+ YL+LDEA Y I+ ++ ++ L +++L L+GTP++N + E WA
Sbjct: 786 FYYLVLDEAH---------Y---IKNTKTKLYQAFLTLKAQHKLCLTGTPMENHLGEFWA 833
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAE--NKTSIDEREYPIVL 163
+F++P +F + F IE H E K +++R P +L
Sbjct: 834 QFNFLLPGFLGGQRQFTKLFRTPIEKHGELERKQLLNQRIKPFIL 878
>TIGR_CMR|CPS_3404 [details] [associations]
symbol:CPS_3404 "Snf2 family protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:YP_270079.1 ProteinModelPortal:Q47YP1 STRING:Q47YP1
GeneID:3519815 KEGG:cps:CPS_3404 PATRIC:21469757
HOGENOM:HOG000294304 BioCyc:CPSY167879:GI48-3433-MONOMER
Uniprot:Q47YP1
Length = 1134
Score = 174 (66.3 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 42/165 (25%), Positives = 79/165 (47%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+++F P G+ + QF ++ + + ++ITSY L+ D ++ K
Sbjct: 730 IDKFTPQLSYQVLHGNKRHE----QFGCLEGVENGENQVDIIITSYALITKDLAHYTDRK 785
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
+ YL+LDEA Y I+ ++ ++ L +++L L+GTP++N + E WA
Sbjct: 786 FYYLVLDEAH---------Y---IKNTKTKLYQAFLTLKAQHKLCLTGTPMENHLGEFWA 833
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAE--NKTSIDEREYPIVL 163
+F++P +F + F IE H E K +++R P +L
Sbjct: 834 QFNFLLPGFLGGQRQFTKLFRTPIEKHGELERKQLLNQRIKPFIL 878
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 176 (67.0 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 51/163 (31%), Positives = 84/163 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQF-WDMKN----------LHTKDAS--FHVVITSYQL 48
E + PD VV Y G R ++R+ + +N K+AS FHV++TSY+L
Sbjct: 779 EMWAPDMYVVTYVGDKDSRAVIRENEFSFENNAIRGGKKPSKMKKEASVKFHVLLTSYEL 838
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W L++DEA + + QS +++L + +++LLL+G
Sbjct: 839 ITIDTAVLGSIDWACLVVDEAHRL------------KNNQSKFFRILNNYPLQHKLLLTG 886
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F + + F E F+ DI + K
Sbjct: 887 TPLQNNLEELFHLLNFLTPERFSNLEGFLEEFA-DIAKEDQIK 928
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 176 (67.0 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWDMKNLHTKDAS---------FHVVITSYQL 48
E + PD VV Y G R ++R+ F D K AS FHV++TSY+L
Sbjct: 805 EMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRGGKKASKMKKEAAVKFHVLLTSYEL 864
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D I W L++DEA + + QS +++L + +++LLL+G
Sbjct: 865 ITIDQAILGSIDWACLVVDEAHRL------------KNNQSKFFRVLNNYPLQHKLLLTG 912
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
TP+QN++ EL+ LL+F+ P F++ + F E F+ DI + K
Sbjct: 913 TPLQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DIAKEDQIK 954
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 172 (65.6 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 40/131 (30%), Positives = 73/131 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+++ FHV++T+Y++ + D + W L++DEA + + + S+ K
Sbjct: 144 QESRFHVLLTTYEICLKDSSFLKSFPWSVLVVDEAHRL------------KNQNSLLHKT 191
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHD--EFNEWFSKDIESHAENKT 152
LL FS LLL+GTPIQNS+ EL++LL F+ P +F +F + + +DIE +++ +
Sbjct: 192 LLEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFPKEQVGDFVQRY-QDIEKESDSAS 250
Query: 153 SIDEREYPIVL 163
+ + P +L
Sbjct: 251 ELHKLLQPFLL 261
Score = 134 (52.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
MERF P V Y G +ER L+Q D+K +++ FHV++T+Y++ + D +
Sbjct: 116 MERFAPGLSCVMYAGDKEERARLQQ--DLK----QESRFHVLLTTYEICLKDSSFLKSFP 169
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W L++DEA + + N S L+ E S+ + LLL G +N L
Sbjct: 170 WSVLVVDEAHRLKNQN--SLLHKTLLEFSVVFSLLLTGTPIQNSL 212
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 157 (60.3 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 43/151 (28%), Positives = 84/151 (55%)
Query: 7 DFKVVPYWGSPQERKILRQFWDMKNLHTKDA------SFHVVITSYQLVVSDFKYFNRIK 60
+ + Y GS R++++Q+ +M T+ F VVIT+++++++D +I+
Sbjct: 455 EMNAIVYHGSQISRQMIQQY-EMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQ 513
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W+ +++DEA + + N L + KL+ + +++LL+GTP+QNS+ EL++
Sbjct: 514 WRCVVIDEAHRLKNRNC-KLLEGL--------KLM---ALEHKVLLTGTPLQNSVEELFS 561
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
LL+F+ P F S F E F D+++ + K
Sbjct: 562 LLNFLEPQQFPSETAFLEEFG-DLKTEEQVK 591
Score = 43 (20.2 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIYSA-HNKAEK 175
+ W KDI +H K ++E++ ++ +L+Y H K ++
Sbjct: 1031 WGRW--KDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDE 1071
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 173 (66.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 49/163 (30%), Positives = 82/163 (50%)
Query: 4 FVPDFKVVPYWGSPQERKILRQ--FW---DMKNLHTKDAS------------FHVVITSY 46
+ P VV Y+G+ Q R ++R+ F+ D K + K + F V++TSY
Sbjct: 342 WAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSY 401
Query: 47 QLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLL 106
+++ D IKW+ +I+DE + + + S + L +S +R+LL
Sbjct: 402 EMINLDSAVLKPIKWECMIVDEGHRL------------KNKDSKLFSSLTQYSSNHRILL 449
Query: 107 SGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAE 149
+GTP+QN++ EL+ L+HF+ F S +EF E F KDI +
Sbjct: 450 TGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEF-KDINQEEQ 491
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 158 (60.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKW 61
+ + Y GS R++++Q+ D + A F +IT++++++SD I+W
Sbjct: 109 EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEW 168
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +I+DEA + + N L+ ++ +++LL+GTP+QN++ EL++L
Sbjct: 169 RCVIIDEAHRLKNRNC-KLLDSLKH-----------MDLEHKVLLTGTPLQNTVEELFSL 216
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ PS F S EF + F D+++ +
Sbjct: 217 LHFLEPSQFPSESEFLKDFG-DLKTEEQ 243
Score = 37 (18.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIY 167
+ W +DI SH K + ER+ + +L+Y
Sbjct: 684 WGRW--RDILSHGRFKRRMTERDVETICRAILVY 715
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 40/131 (30%), Positives = 73/131 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+++ FHV++T+Y++ + D + W L++DEA + + + S+ K
Sbjct: 144 QESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRL------------KNQSSLLHKT 191
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSH--DEFNEWFSKDIESHAENKT 152
L FS LLL+GTPIQNS+ EL++LL F+ P +F ++F + + +DIE +E+ +
Sbjct: 192 LSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRY-QDIEKESESAS 250
Query: 153 SIDEREYPIVL 163
+ + P +L
Sbjct: 251 ELYKLLQPFLL 261
Score = 130 (50.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
MERF P V Y G +R L+Q D+K +++ FHV++T+Y++ + D +
Sbjct: 116 MERFAPGLSCVTYAGDKDKRACLQQ--DLK----QESRFHVLLTTYEICLKDASFLKSFP 169
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W L++DEA + N S L+ E S+ + LLL G +N L
Sbjct: 170 WSVLVVDEAHRLK--NQSSLLHKTLSEFSVVFSLLLTGTPIQNSL 212
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 40/131 (30%), Positives = 73/131 (55%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+++ FHV++T+Y++ + D + W L++DEA + + + S+ K
Sbjct: 144 QESRFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRL------------KNQSSLLHKT 191
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSH--DEFNEWFSKDIESHAENKT 152
L FS LLL+GTPIQNS+ EL++LL F+ P +F ++F + + +DIE +E+ +
Sbjct: 192 LSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRY-QDIEKESESAS 250
Query: 153 SIDEREYPIVL 163
+ + P +L
Sbjct: 251 ELYKLLQPFLL 261
Score = 130 (50.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
MERF P V Y G +R L+Q D+K +++ FHV++T+Y++ + D +
Sbjct: 116 MERFAPGLSCVTYAGDKDKRACLQQ--DLK----QESRFHVLLTTYEICLKDASFLKSFP 169
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W L++DEA + N S L+ E S+ + LLL G +N L
Sbjct: 170 WSVLVVDEAHRLK--NQSSLLHKTLSEFSVVFSLLLTGTPIQNSL 212
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 173 (66.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 48/154 (31%), Positives = 81/154 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD--------MKNLHT-KDASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D + + T ++ FHV++TSY+
Sbjct: 685 ELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYEC 744
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D + I W L++DEA + + QS +K L ++ + R+LL+G
Sbjct: 745 INMDKAILSSIDWAALVVDEAHRL------------KNNQSTFFKNLREYNIQYRVLLTG 792
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSK 142
TP+QN++ EL+ LL+F+ P F+ + F FS+
Sbjct: 793 TPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE 826
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 173 (66.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 48/154 (31%), Positives = 81/154 (52%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD--------MKNLHT-KDASFHVVITSYQL 48
E + PDF VV Y G + R ++R+ F D + + T ++ FHV++TSY+
Sbjct: 685 ELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYEC 744
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D + I W L++DEA + + QS +K L ++ + R+LL+G
Sbjct: 745 INMDKAILSSIDWAALVVDEAHRL------------KNNQSTFFKNLREYNIQYRVLLTG 792
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSK 142
TP+QN++ EL+ LL+F+ P F+ + F FS+
Sbjct: 793 TPLQNNLEELFHLLNFLAPDRFNQLESFTAEFSE 826
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 171 (65.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 39/128 (30%), Positives = 72/128 (56%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+ + PD V Y G+ R +L+++ M + + + F+V++T+Y+ V+ D + ++ W
Sbjct: 515 DNWSPDLNYVVYNGNEASRNVLKEYELMVDGNPRRPKFNVLLTTYEYVLVDSSFLSQFNW 574
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
Q++ +DEA + + + Y+ L F+ RLL++GTPIQN++AEL AL
Sbjct: 575 QFMAVDEAHRLKNRDSQLYIK------------LQEFNSPARLLITGTPIQNNLAELSAL 622
Query: 122 LHFIMPSM 129
L F+ P +
Sbjct: 623 LDFLNPGL 630
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 157 (60.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 43/151 (28%), Positives = 84/151 (55%)
Query: 7 DFKVVPYWGSPQERKILRQFWDMKNLHTKDA------SFHVVITSYQLVVSDFKYFNRIK 60
+ + Y GS R++++Q+ +M T+ F VVIT+++++++D +I+
Sbjct: 330 EMNAIVYHGSQISRQMIQQY-EMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQ 388
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W+ +++DEA + + N L + KL+ + +++LL+GTP+QNS+ EL++
Sbjct: 389 WRCVVIDEAHRLKNRNC-KLLEGL--------KLM---ALEHKVLLTGTPLQNSVEELFS 436
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
LL+F+ P F S F E F D+++ + K
Sbjct: 437 LLNFLEPQQFPSETAFLEEFG-DLKTEEQVK 466
Score = 43 (20.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIYSA-HNKAEK 175
+ W KDI +H K ++E++ ++ +L+Y H K ++
Sbjct: 906 WGRW--KDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDE 946
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 157 (60.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 43/151 (28%), Positives = 84/151 (55%)
Query: 7 DFKVVPYWGSPQERKILRQFWDMKNLHTKDA------SFHVVITSYQLVVSDFKYFNRIK 60
+ + Y GS R++++Q+ +M T+ F VVIT+++++++D +I+
Sbjct: 330 EMNAIVYHGSQISRQMIQQY-EMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQ 388
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 120
W+ +++DEA + + N L + KL+ + +++LL+GTP+QNS+ EL++
Sbjct: 389 WRCVVIDEAHRLKNRNC-KLLEGL--------KLM---ALEHKVLLTGTPLQNSVEELFS 436
Query: 121 LLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
LL+F+ P F S F E F D+++ + K
Sbjct: 437 LLNFLEPQQFPSETAFLEEFG-DLKTEEQVK 466
Score = 43 (20.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIYSA-HNKAEK 175
+ W KDI +H K ++E++ ++ +L+Y H K ++
Sbjct: 906 WGRW--KDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDE 946
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 159 (61.0 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 42/148 (28%), Positives = 80/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQFW-----DMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
D + Y GS R++++Q+ D +L F +IT++++++SD I W
Sbjct: 919 DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKFDALITTFEMILSDCPELREISW 978
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +++DEA + + N L+ + K+L +++LL+GTP+QN++ EL++L
Sbjct: 979 RCVVIDEAHRLKNRNC-KLLDSL--------KML---EIEHKVLLTGTPLQNTVEELFSL 1026
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ P+ F S EF F D+++ +
Sbjct: 1027 LHFLEPAQFPSEIEFLREFG-DLKTEEQ 1053
Score = 43 (20.2 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVLMLI 166
+ W +DI SHA K + ER+ + +I
Sbjct: 1501 WGRW--RDILSHARCKRRLSERDVETICRVI 1529
>ZFIN|ZDB-GENE-081104-186 [details] [associations]
symbol:si:ch211-227i14.2 "si:ch211-227i14.2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 ZFIN:ZDB-GENE-081104-186
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:AL929056
EMBL:CABZ01053382 EMBL:CABZ01053383 IPI:IPI00890401
Ensembl:ENSDART00000111655 Bgee:F1Q5V1 Uniprot:F1Q5V1
Length = 3108
Score = 173 (66.0 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 34/100 (34%), Positives = 60/100 (60%)
Query: 38 SFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLG 97
+FHV +TSY+L++ D +F R +W++L+LDE Q I ++ E+ W+ +
Sbjct: 1160 NFHVCVTSYKLLLKDQSHFLRRRWKHLVLDEVQLIKNMT--------EKH----WETIFN 1207
Query: 98 FSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFN 137
+ R+LL TP+QN++ ELW ++HF++P + +H N
Sbjct: 1208 IKSQQRILLINTPLQNTLKELWTMIHFLLPGI--THPYLN 1245
Score = 134 (52.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 33/103 (32%), Positives = 57/103 (55%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIKW 61
+R+ P K++ Y GS ++R+ R W N +FHV +TSY+L++ D +F R +W
Sbjct: 1130 KRWCPGLKILLYLGSRRQRRYKRSRWCEPN------NFHVCVTSYKLLLKDQSHFLRRRW 1183
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRL 104
++L+LDE Q I ++ + I +S + LL+ +N L
Sbjct: 1184 KHLVLDEVQLIKNMTE-KHWETIFNIKSQQRILLINTPLQNTL 1225
>POMBASE|SPBC1826.01c [details] [associations]
symbol:mot1 "TATA-binding protein associated factor
Mot1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017025 "TBP-class
protein binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC1826.01c GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0006355 GO:GO:0003677 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006366 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0017025 EMBL:AB027981 PIR:T39739
RefSeq:NP_596080.2 ProteinModelPortal:O43065 STRING:O43065
EnsemblFungi:SPBC1826.01c.1 GeneID:2539633 KEGG:spo:SPBC1826.01c
OrthoDB:EOG44XNQZ NextBio:20800788 Uniprot:O43065
Length = 1953
Score = 170 (64.9 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 44/127 (34%), Positives = 66/127 (51%)
Query: 32 LHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMR 91
+ +K VV+TSY + +D +I W Y +LDE I N + L + +S+R
Sbjct: 1459 IRSKMKKSDVVVTSYDICRNDVDELVKIDWNYCVLDEGHVIK--NARAKLT--KAVKSLR 1514
Query: 92 WKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENK 151
+RL+LSGTPIQN++ ELW+L F+MP + F E F + I + + K
Sbjct: 1515 --------SYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQERFVRPIAASRDAK 1566
Query: 152 TSIDERE 158
+S ERE
Sbjct: 1567 SSSKERE 1573
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 166 (63.5 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 42/119 (35%), Positives = 77/119 (64%)
Query: 30 KNLHTKDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQS 89
+NL + D FHV++T+Y++ + D +Y KW+ L++DEA + N S L+ Q+
Sbjct: 127 QNLKS-DPRFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLK--NQESLLH-----QT 178
Query: 90 MRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMF--DSHDEFNEWFSKDIES 146
++ + +GF R+LL+GTPIQN++ E+++LL FI PS+F ++ ++F ++ DI++
Sbjct: 179 LK-EFTVGF----RVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYA-DIQT 231
Score = 140 (54.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 35/105 (33%), Positives = 60/105 (57%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
+ERF P V+ Y G ++R L+Q NL + D FHV++T+Y++ + D +Y K
Sbjct: 103 LERFCPSLSVICYTGDKEKRAELQQ-----NLKS-DPRFHVLLTTYEMCLKDARYLKSWK 156
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W+ L++DEA + N S L+ +E ++ +++LL G +N L
Sbjct: 157 WKILVVDEAHRLK--NQESLLHQTLKEFTVGFRVLLTGTPIQNNL 199
>FB|FBgn0022787 [details] [associations]
symbol:Hel89B "Helicase 89B" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0006963 "positive regulation of antibacterial
peptide biosynthetic process" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0045087 "innate immune
response" evidence=IMP] [GO:0008063 "Toll signaling pathway"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0042742 GO:GO:0045087
GO:GO:0004003 GO:GO:0019730 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008063 GO:GO:0006963
InterPro:IPR022707 Pfam:PF12054 EMBL:AF033104
ProteinModelPortal:Q71V44 SMR:Q71V44 STRING:Q71V44 PaxDb:Q71V44
PRIDE:Q71V44 FlyBase:FBgn0022787 InParanoid:Q71V44
OrthoDB:EOG4ZGMT5 ArrayExpress:Q71V44 Bgee:Q71V44 Uniprot:Q71V44
Length = 1924
Score = 169 (64.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 40/125 (32%), Positives = 66/125 (52%)
Query: 40 HVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFS 99
++V+ SY V D +F+ I + Y +LDE I + ++ K +
Sbjct: 1457 NLVVASYDTVRKDIDFFSGIHFNYCVLDEGHII------------KNGKTKSSKAIKRLK 1504
Query: 100 CRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREY 159
+RL+LSGTPIQN++ ELW+L F+MP + +F + FS+ I S + K+S E+E
Sbjct: 1505 ANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEA 1564
Query: 160 PIVLM 164
++ M
Sbjct: 1565 GVLAM 1569
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 157 (60.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 44/148 (29%), Positives = 81/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQ----FWDMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKW 61
D VV Y GS R++++Q F D + + A F +IT++++++ N I+W
Sbjct: 458 DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEW 517
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +I+DEA + + N L + KL+ + +++LL+GTP+QN++ EL++L
Sbjct: 518 RCVIIDEAHRLKNKNC-KLLEGL--------KLM---NLEHKVLLTGTPLQNTVEELFSL 565
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ P F S F + F D+++ +
Sbjct: 566 LHFLEPLRFPSESTFMQEFG-DLKTEEQ 592
Score = 35 (17.4 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIYS-AHNKAEK 175
+ W ++I SH K ++E + I+ +L Y H + ++
Sbjct: 1033 WGRW--REILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDE 1073
>UNIPROTKB|F1SCA0 [details] [associations]
symbol:BTAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:CT868714
EMBL:CT954286 Ensembl:ENSSSCT00000011455 Uniprot:F1SCA0
Length = 1850
Score = 160 (61.4 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 38/125 (30%), Positives = 68/125 (54%)
Query: 40 HVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFS 99
++++ SY +V +D +F IK+ Y ILDE I N + L+ ++ + +
Sbjct: 1378 NLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIK--NGKTKLSKAVKQLTANY------- 1428
Query: 100 CRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREY 159
R++LSGTPIQN++ ELW+L F+MP + +F + K I + + ++S E+E
Sbjct: 1429 ---RIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEA 1485
Query: 160 PIVLM 164
++ M
Sbjct: 1486 GVLAM 1490
Score = 36 (17.7 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 5 VPDFKVVPYWGSPQERKILRQFWD-MKNLHTKDASFHVVIT 44
VP + + Y +P+ I+ WD + L AS + ++T
Sbjct: 455 VPVVESLVYLQTPKVPFIINTLWDALLELDDLTASTNSIMT 495
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 168 (64.2 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 39/102 (38%), Positives = 62/102 (60%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
K F+V+IT+Y++ ++D + +RI W+YL++DEA + N L IE
Sbjct: 622 KITKFNVLITTYEMAITDRTHLSRIPWKYLVIDEAHRLK--NKSCKLT-IE--------- 669
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEF 136
L +S + LLL+GTP+QN+ ELW+LL+F+ P F + D+F
Sbjct: 670 LRSYSFDHLLLLTGTPLQNNTQELWSLLNFLDPKQFSNLDQF 711
>CGD|CAL0002614 [details] [associations]
symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0042790 "transcription of nuclear large rRNA transcript from
RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
Uniprot:Q59TC9
Length = 1915
Score = 166 (63.5 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 42/118 (35%), Positives = 63/118 (53%)
Query: 41 VVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSC 100
VV+TSY + +D + + + Y +LDE I N S L+ K +
Sbjct: 1412 VVVTSYDVCRNDVESLTKHDYNYCVLDEGHIIK--NASSKLS----------KSVKRVKA 1459
Query: 101 RNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDERE 158
+RL+LSGTPIQN++ ELW+L F+MP + F+E F+K I + +KTS E+E
Sbjct: 1460 EHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQE 1517
>UNIPROTKB|B4E0W6 [details] [associations]
symbol:BTAF1 "TATA-binding protein-associated factor 172"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 UniGene:Hs.500526 HGNC:HGNC:17307
EMBL:AL365398 EMBL:AL359198 EMBL:AK303554 IPI:IPI01015564
SMR:B4E0W6 STRING:B4E0W6 Ensembl:ENST00000544642 HOVERGEN:HBG104002
Uniprot:B4E0W6
Length = 677
Score = 160 (61.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/125 (30%), Positives = 68/125 (54%)
Query: 40 HVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFS 99
++++ SY +V +D +F IK+ Y ILDE I N + L+ ++ + +
Sbjct: 205 NLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIK--NGKTKLSKAVKQLTANY------- 255
Query: 100 CRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREY 159
R++LSGTPIQN++ ELW+L F+MP + +F + K I + + ++S E+E
Sbjct: 256 ---RIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEA 312
Query: 160 PIVLM 164
++ M
Sbjct: 313 GVLAM 317
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 158 (60.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKW 61
+ + Y GS R++++Q+ D + A F +IT++++++SD I+W
Sbjct: 500 EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEW 559
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +I+DEA + + N L+ ++ +++LL+GTP+QN++ EL++L
Sbjct: 560 RCVIIDEAHRLKNRNC-KLLDSLKH-----------MDLEHKVLLTGTPLQNTVEELFSL 607
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ PS F S EF + F D+++ +
Sbjct: 608 LHFLEPSQFPSESEFLKDFG-DLKTEEQ 634
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIY 167
+ W +DI SH K + ER+ + +L+Y
Sbjct: 1075 WGRW--RDILSHGRFKRRMTERDVETICRAILVY 1106
>ZFIN|ZDB-GENE-021025-1 [details] [associations]
symbol:btaf1 "BTAF1 RNA polymerase II, B-TFIID
transcription factor-associated" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR000357 InterPro:IPR001650 InterPro:IPR016024
Pfam:PF00176 Pfam:PF00271 Pfam:PF02985 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-021025-1 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR022707
Pfam:PF12054 GeneTree:ENSGT00630000089754 EMBL:BX530089
EMBL:CR792417 IPI:IPI00929996 Ensembl:ENSDART00000084327
ArrayExpress:F1Q603 Bgee:F1Q603 Uniprot:F1Q603
Length = 1861
Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 40 HVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFS 99
++++ SY +V +D ++F IK+ Y ILDE I N + L+ K + +
Sbjct: 1387 NLIVASYDVVRNDVEFFRDIKFNYCILDEGHVIK--NGKTKLS----------KAIKQLT 1434
Query: 100 CRNRLLLSGTPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSKDIESHAENKTSIDEREY 159
RL+LSGTPIQN++ ELW+L F+MP + +F + K I + + K+S E+E
Sbjct: 1435 ANYRLILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEA 1494
Query: 160 PIVLM 164
++ M
Sbjct: 1495 GVLAM 1499
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 160 (61.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 46/148 (31%), Positives = 81/148 (54%)
Query: 10 VVPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKWQYL 64
V+ Y GS R++L+Q+ D + + A F VIT++++++ N I W+ +
Sbjct: 988 VIVYHGSVVSRQMLQQYEMYCRDSQGRVIRGAYRFQAVITTFEMILGGCPELNAIDWRCV 1047
Query: 65 ILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGF---SCRNRLLLSGTPIQNSMAELWAL 121
I+DEA + + N KLL GF S +++LL+GTP+QN++ EL++L
Sbjct: 1048 IIDEAHRLKNKNC---------------KLLEGFKLMSLEHKVLLTGTPLQNTVEELFSL 1092
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ P+ F S + F + F D+++ +
Sbjct: 1093 LHFLEPTRFPSENTFMQEFG-DLKTEEQ 1119
Score = 37 (18.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 136 FNEWFSKDIESHAENKTSIDERE 158
+ W KDI +H K + ER+
Sbjct: 1564 WGRW--KDILAHGRFKRQLSERD 1584
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 158 (60.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKW 61
+ + Y GS R++++Q+ D + A F +IT++++++SD I+W
Sbjct: 836 EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEW 895
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +I+DEA + + N L+ ++ +++LL+GTP+QN++ EL++L
Sbjct: 896 RCVIIDEAHRLKNRNC-KLLDSLKH-----------MDLEHKVLLTGTPLQNTVEELFSL 943
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ PS F S EF + F D+++ +
Sbjct: 944 LHFLEPSQFPSESEFLKDFG-DLKTEEQ 970
Score = 37 (18.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIY 167
+ W +DI SH K + ER+ + +L+Y
Sbjct: 1412 WGRW--RDILSHGRFKRRMTERDVETICRAILVY 1443
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 158 (60.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKW 61
+ + Y GS R++++Q+ D + A F +IT++++++SD I+W
Sbjct: 883 EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEW 942
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +I+DEA + + N L+ ++ +++LL+GTP+QN++ EL++L
Sbjct: 943 RCVIIDEAHRLKNRNC-KLLDSLKH-----------MDLEHKVLLTGTPLQNTVEELFSL 990
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ PS F S EF + F D+++ +
Sbjct: 991 LHFLEPSQFPSESEFLKDFG-DLKTEEQ 1017
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIY 167
+ W +DI SH K + ER+ + +L+Y
Sbjct: 1459 WGRW--RDILSHGRFKRRMTERDVETICRAILVY 1490
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 158 (60.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKW 61
+ + Y GS R++++Q+ D + A F +IT++++++SD I+W
Sbjct: 883 EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEW 942
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +I+DEA + + N L+ ++ +++LL+GTP+QN++ EL++L
Sbjct: 943 RCVIIDEAHRLKNRNC-KLLDSLKH-----------MDLEHKVLLTGTPLQNTVEELFSL 990
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ PS F S EF + F D+++ +
Sbjct: 991 LHFLEPSQFPSESEFLKDFG-DLKTEEQ 1017
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIY 167
+ W +DI SH K + ER+ + +L+Y
Sbjct: 1458 WGRW--RDILSHGRFKRRMTERDVETICRAILVY 1489
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 158 (60.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKW 61
+ + Y GS R++++Q+ D + A F +IT++++++SD I+W
Sbjct: 883 EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEW 942
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +I+DEA + + N L+ ++ +++LL+GTP+QN++ EL++L
Sbjct: 943 RCVIIDEAHRLKNRNC-KLLDSLKH-----------MDLEHKVLLTGTPLQNTVEELFSL 990
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ PS F S EF + F D+++ +
Sbjct: 991 LHFLEPSQFPSESEFLKDFG-DLKTEEQ 1017
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIY 167
+ W +DI SH K + ER+ + +L+Y
Sbjct: 1458 WGRW--RDILSHGRFKRRMTERDVETICRAILVY 1489
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 158 (60.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKW 61
+ + Y GS R++++Q+ D + A F +IT++++++SD I+W
Sbjct: 885 EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEW 944
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +I+DEA + + N L+ ++ +++LL+GTP+QN++ EL++L
Sbjct: 945 RCVIIDEAHRLKNRNC-KLLDSLKH-----------MDLEHKVLLTGTPLQNTVEELFSL 992
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ PS F S EF + F D+++ +
Sbjct: 993 LHFLEPSQFPSESEFLKDFG-DLKTEEQ 1019
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIY 167
+ W +DI SH K + ER+ + +L+Y
Sbjct: 1460 WGRW--RDILSHGRFKRRMTERDVETICRAILVY 1491
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 158 (60.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 7 DFKVVPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKW 61
+ + Y GS R++++Q+ D + A F +IT++++++SD I+W
Sbjct: 883 EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEW 942
Query: 62 QYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWAL 121
+ +I+DEA + + N L+ ++ +++LL+GTP+QN++ EL++L
Sbjct: 943 RCVIIDEAHRLKNRNC-KLLDSLKH-----------MDLEHKVLLTGTPLQNTVEELFSL 990
Query: 122 LHFIMPSMFDSHDEFNEWFSKDIESHAE 149
LHF+ PS F S EF + F D+++ +
Sbjct: 991 LHFLEPSQFPSESEFLKDFG-DLKTEEQ 1017
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIY 167
+ W +DI SH K + ER+ + +L+Y
Sbjct: 1459 WGRW--RDILSHGRFKRRMTERDVETICRAILVY 1490
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 160 (61.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 38/131 (29%), Positives = 72/131 (54%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+++ FHV++T+Y++ + D + W L +DEA + + + S+ +
Sbjct: 136 QESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRL------------KNQSSLLHRT 183
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMF--DSHDEFNEWFSKDIESHAENKT 152
L FS RLLL+GTPIQNS+ EL++LL + P +F + ++F + + +DIE +++ +
Sbjct: 184 LSEFSVVFRLLLTGTPIQNSLQELYSLLSVVEPDLFCREQVEDFVQCY-QDIEKESKSAS 242
Query: 153 SIDEREYPIVL 163
+ P +L
Sbjct: 243 ELHRLLRPFLL 253
Score = 125 (49.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 34/105 (32%), Positives = 55/105 (52%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
MERF P V Y G +ER +Q D++ +++ FHV++T+Y++ + D +
Sbjct: 108 MERFAPGLSCVTYTGDKEERARRQQ--DLR----QESGFHVLLTTYEICLKDASFLKSFS 161
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W L +DEA + N S L+ E S+ ++LLL G +N L
Sbjct: 162 WSVLAVDEAHRLK--NQSSLLHRTLSEFSVVFRLLLTGTPIQNSL 204
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 159 (61.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/153 (32%), Positives = 79/153 (51%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVS---DFKYFN 57
+ R+ P+ V Y GS ER+ +R + K+ T F V++T+Y +V S + K F
Sbjct: 357 ISRWCPELVVEKYHGSQDERRRMRGRF-AKDGFT---GFDVLLTTYHIVGSTPEERKMFR 412
Query: 58 RIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAE 117
K Y+I DEA + ++ Y N L+ + R R+LL+GTP+QN++ E
Sbjct: 413 VCKLDYVIFDEAHMLKNMTTQRYAN------------LITINARMRILLTGTPLQNNLLE 460
Query: 118 LWALLHFIMPSMF-DSHDEFNEWFSKDIESHAE 149
L +LL F+MP F S ++ F+K +S +
Sbjct: 461 LISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGD 493
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 159 (61.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 38/131 (29%), Positives = 72/131 (54%)
Query: 35 KDASFHVVITSYQLVVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKL 94
+++ FHV++T+Y++ + D + W L +DEA + + + S+ +
Sbjct: 136 QESGFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRL------------KNQSSLLHRT 183
Query: 95 LLGFSCRNRLLLSGTPIQNSMAELWALLHFIMPSMF--DSHDEFNEWFSKDIESHAENKT 152
L FS RLLL+GTPIQNS+ EL++LL + P +F + ++F + + +DIE +++ +
Sbjct: 184 LSEFSAVFRLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRY-QDIEKESKSAS 242
Query: 153 SIDEREYPIVL 163
+ P +L
Sbjct: 243 ELHRLLQPFLL 253
Score = 129 (50.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 35/105 (33%), Positives = 55/105 (52%)
Query: 1 MERFVPDFKVVPYWGSPQERKILRQFWDMKNLHTKDASFHVVITSYQLVVSDFKYFNRIK 60
MERF P V Y G +ER L+Q D++ +++ FHV++T+Y++ + D +
Sbjct: 108 MERFAPGLSCVTYTGDKEERARLQQ--DLR----QESGFHVLLTTYEICLKDASFLKSFS 161
Query: 61 WQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLL-GFSCRNRL 104
W L +DEA + N S L+ E S ++LLL G +N L
Sbjct: 162 WSVLAVDEAHRLK--NQSSLLHRTLSEFSAVFRLLLTGTPIQNSL 204
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 156 (60.0 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 42/144 (29%), Positives = 79/144 (54%)
Query: 11 VPYWGSPQERKILRQFW----DMKNLHTKDA-SFHVVITSYQLVVSDFKYFNRIKWQYLI 65
+ Y GS R++++Q+ D K A F +IT++++V+SD I+W+ +I
Sbjct: 831 IVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDALITTFEMVLSDCPELREIEWRCVI 890
Query: 66 LDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFI 125
+DEA + + N L+ ++ +++LL+GTP+QN++ EL++LLHF+
Sbjct: 891 IDEAHRLKNRNC-KLLDSLKH-----------MDLEHKVLLTGTPLQNTVEELFSLLHFL 938
Query: 126 MPSMFDSHDEFNEWFSKDIESHAE 149
P+ F S EF + F D+++ +
Sbjct: 939 EPTQFSSEAEFLKDFG-DLKTEEQ 961
Score = 35 (17.4 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 136 FNEWFSKDIESHAENKTSIDEREYPIVL--MLIY 167
+ W +DI +H K ++ER+ + +L+Y
Sbjct: 1402 WGRW--RDILTHGRFKRGMNERDVEKICRAILVY 1433
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 161 (61.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 47/154 (30%), Positives = 80/154 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
E++ PDF VV Y G R +LR+ F + K T++ FHV++TSY+
Sbjct: 671 EQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYET 730
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D + I+W L++DEA + + QS+ +K L ++ R+LL+G
Sbjct: 731 INMDKTILSSIEWGALVVDEAHRL------------KNNQSLFFKNLNEYTIHYRVLLTG 778
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSK 142
TP+QN++ EL+ LL+F+ F+ + F F++
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNE 812
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 161 (61.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 47/154 (30%), Positives = 80/154 (51%)
Query: 2 ERFVPDFKVVPYWGSPQERKILRQ----FWD---------MKNLHTKDASFHVVITSYQL 48
E++ PDF VV Y G R +LR+ F + K T++ FHV++TSY+
Sbjct: 671 EQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYET 730
Query: 49 VVSDFKYFNRIKWQYLILDEAQAIVDINVYSYLNDIEREQSMRWKLLLGFSCRNRLLLSG 108
+ D + I+W L++DEA + + QS+ +K L ++ R+LL+G
Sbjct: 731 INMDKTILSSIEWGALVVDEAHRL------------KNNQSLFFKNLNEYTIHYRVLLTG 778
Query: 109 TPIQNSMAELWALLHFIMPSMFDSHDEFNEWFSK 142
TP+QN++ EL+ LL+F+ F+ + F F++
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNE 812
WARNING: HSPs involving 124 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 190 175 0.00078 109 3 11 22 0.36 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 374
No. of states in DFA: 613 (65 KB)
Total size of DFA: 184 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.66u 0.08s 16.74t Elapsed: 00:00:20
Total cpu time: 16.71u 0.08s 16.79t Elapsed: 00:00:20
Start: Thu Aug 15 13:16:28 2013 End: Thu Aug 15 13:16:48 2013
WARNINGS ISSUED: 2