RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1304
         (184 letters)



>d1vkna2 d.81.1.1 (A:145-307) N-acetyl-gamma-glutamyl-phosphate
           reductase ArgC {Thermotoga maritima [TaxId: 2336]}
          Length = 163

 Score = 25.6 bits (55), Expect = 3.2
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 1/65 (1%)

Query: 98  LYRENLIDIPIIIADLKNESSILIM-AKKCRVILNCVGPYTWYGEAVVKACIEAKTHHVD 156
             + NL+D   I+ D K+  S      K   +          Y  A  +   E +     
Sbjct: 13  ALKHNLVDPETILVDAKSGVSGAGRKEKVDYLFSEVNESLRPYNVAKHRHVPEMEQELGK 72

Query: 157 ITGEP 161
           I+G+ 
Sbjct: 73  ISGKK 77


>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase
           (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]}
          Length = 224

 Score = 24.8 bits (53), Expect = 6.9
 Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 5/28 (17%)

Query: 154 HVDITGEPYFMEYMQYEYNTRAQESEVQ 181
            +D  G P  +     E+N R  + E Q
Sbjct: 172 MIDKQGNPKVI-----EFNCRFGDLETQ 194


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0486    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 646,038
Number of extensions: 27417
Number of successful extensions: 57
Number of sequences better than 10.0: 1
Number of HSP's gapped: 57
Number of HSP's successfully gapped: 2
Length of query: 184
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 104
Effective length of database: 1,309,196
Effective search space: 136156384
Effective search space used: 136156384
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.6 bits)