BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1305
(68 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RAS0|ACADS_PONAB Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo
abelii GN=ACADS PE=2 SV=1
Length = 412
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
ML +TCRDFA++EL PIAA++DKEHLFPA Q+KK+G LGL+ + V EE GGAGLD LA
Sbjct: 40 MLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYA 99
Query: 61 VAMEEIAQ 68
+AMEEI++
Sbjct: 100 IAMEEISR 107
>sp|P16219|ACADS_HUMAN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADS PE=1 SV=1
Length = 412
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
ML +TCRDFA++EL PIAA++DKEHLFPA Q+KK+G LGL+ + V EE GGAGLD LA
Sbjct: 40 MLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYA 99
Query: 61 VAMEEIAQ 68
+AMEEI++
Sbjct: 100 IAMEEISR 107
>sp|Q3ZBF6|ACADS_BOVIN Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADS PE=2 SV=1
Length = 412
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 56/68 (82%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
ML++TCRDFA++EL PIAA++DKEH FPA Q+KK+G LGLM + V EE GAGLD LA
Sbjct: 40 MLRQTCRDFAEKELFPIAAQVDKEHRFPAAQVKKMGELGLMAMNVPEELSGAGLDYLAYS 99
Query: 61 VAMEEIAQ 68
+AMEEI++
Sbjct: 100 IAMEEISR 107
>sp|P15651|ACADS_RAT Short-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acads PE=1 SV=2
Length = 412
Score = 92.4 bits (228), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/68 (63%), Positives = 56/68 (82%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
ML++TCRDFA++EL PIAA+LDKEHLFP Q+KK+G LGL+ + V EE GAGLD LA
Sbjct: 40 MLRQTCRDFAEKELVPIAAQLDKEHLFPTSQVKKMGELGLLAMDVPEELSGAGLDYLAYS 99
Query: 61 VAMEEIAQ 68
+A+EEI++
Sbjct: 100 IALEEISR 107
>sp|P79273|ACADS_PIG Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADS PE=2 SV=1
Length = 413
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 55/68 (80%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
ML++TCRDFA++EL PIAA++DKEH FP Q+KK+G LGLM + V EE GAGLD LA
Sbjct: 40 MLRQTCRDFAEKELVPIAAQVDKEHRFPEAQVKKMGELGLMAMDVPEELSGAGLDYLAYT 99
Query: 61 VAMEEIAQ 68
+AMEEI++
Sbjct: 100 IAMEEISR 107
>sp|Q07417|ACADS_MOUSE Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acads PE=2 SV=2
Length = 412
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/68 (61%), Positives = 56/68 (82%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
ML++TCRDFA++EL PIAA+LD+EHLFP Q+KK+G LGL+ + V EE GAGLD LA
Sbjct: 40 MLRQTCRDFAEKELVPIAAQLDREHLFPTAQVKKMGELGLLAMDVPEELSGAGLDYLAYS 99
Query: 61 VAMEEIAQ 68
+A+EEI++
Sbjct: 100 IALEEISR 107
>sp|P52042|ACDS_CLOAB Acyl-CoA dehydrogenase, short-chain specific OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=bcd PE=3 SV=1
Length = 379
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 51/68 (75%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
++++ R+FA+ E+KPIAA++D+ FP + +KK+G G+MG+ +EYGGAG D L+
Sbjct: 11 LVRQMVREFAENEVKPIAAEIDETERFPMENVKKMGQYGMMGIPFSKEYGGAGGDVLSYI 70
Query: 61 VAMEEIAQ 68
+A+EE+++
Sbjct: 71 IAVEELSK 78
>sp|P45857|ACDB_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgC
PE=2 SV=3
Length = 379
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
M++K RDFA++E+ P A ++K FP IKK+G GLMG+ V E+YGGAG D ++
Sbjct: 9 MMRKMVRDFARKEIAPAAEIMEKTDEFPFQLIKKMGKHGLMGIPVPEQYGGAGADVVSYI 68
Query: 61 VAMEEIAQ 68
+A+ EI++
Sbjct: 69 LAIHEISR 76
>sp|O34421|ACDC_BACSU Probable acyl-CoA dehydrogenase YngJ OS=Bacillus subtilis (strain
168) GN=yngJ PE=3 SV=1
Length = 380
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
M+++ +DFA++E+ P A +D+ FP KK+G LGLMG+ EEYGG+G DT++
Sbjct: 11 MVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMGIPFPEEYGGSGGDTISYA 70
Query: 61 VAMEEIAQ 68
+A+EE+ +
Sbjct: 71 LAVEEVGK 78
>sp|P45867|ACDA_BACSU Acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=acdA
PE=2 SV=1
Length = 379
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
M++K RDFA+ E+ P AA+ D++ F + +++ LGL G+ E+YGG G D LA
Sbjct: 11 MIRKLVRDFAKHEVAPTAAERDEQERFDRELFREMANLGLTGIPWPEDYGGIGSDYLAYV 70
Query: 61 VAMEEIAQ 68
+A+EE+++
Sbjct: 71 IAVEELSK 78
>sp|C3UVB0|ACD_DESML Glutaryl-CoA dehydrogenase OS=Desulfococcus multivorans GN=Acd
PE=1 SV=1
Length = 389
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQ-IKKLGALGLMGVLVDEEYGGAGLDT--L 57
MLQK R+F +++ P A + D E+ FP ++ ++ +G LG G ++ EEYGG G+D L
Sbjct: 11 MLQKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWL 70
Query: 58 ALHVAMEEIAQ 68
A + EEIA+
Sbjct: 71 AAMIVTEEIAR 81
>sp|Q54IM8|ACAD8_DICDI Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium
discoideum GN=acad8 PE=3 SV=1
Length = 416
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
Q DFAQ+++KP A K DKE FP D +++ LG G+ V E+ GG+GL L +
Sbjct: 46 FQSMALDFAQEKMKPFAEKWDKEEYFPRDVMREAAELGFGGIYVREDVGGSGLSRLDASI 105
Query: 62 AMEEIAQ 68
+E +A
Sbjct: 106 IIEALAS 112
>sp|P46703|ACDP_MYCLE Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae
(strain TN) GN=fadE25 PE=3 SV=1
Length = 389
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
L+ T R A++E+ P AA +D+ FP + + L A G + V EEYGG G D++A +
Sbjct: 22 LRATIRALAEKEIAPHAADVDQRARFPEEALAALNASGFNAIHVPEEYGGQGADSVAACI 81
Query: 62 AMEEIAQ 68
+EE+A+
Sbjct: 82 VIEEVAR 88
>sp|Q9UKU7|ACAD8_HUMAN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens
GN=ACAD8 PE=1 SV=1
Length = 415
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
QK DFA +E+ P A+ D++ LFP D ++K LG GV + + GG+GL L V
Sbjct: 48 FQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSV 107
Query: 62 AMEEIA 67
E +A
Sbjct: 108 IFEALA 113
>sp|Q9D7B6|ACAD8_MOUSE Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus
GN=Acad8 PE=2 SV=2
Length = 413
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
QK DFA +E+ P A+ D++ LFP D ++K LG GV V + GG+GL L V
Sbjct: 46 FQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYVRTDVGGSGLSRLDTSV 105
Query: 62 AMEEIA 67
E +A
Sbjct: 106 IFEALA 111
>sp|Q0NXR6|ACAD8_BOVIN Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8
PE=2 SV=1
Length = 416
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
QK +FA +E+ P A+ D++ LFP D ++K LG GV V + GGAGL L +
Sbjct: 49 FQKVAFNFAAREMAPHMAEWDQKELFPVDTMRKAAQLGFGGVYVQTDVGGAGLSRLDTSI 108
Query: 62 AMEEIA 67
E +A
Sbjct: 109 IFEALA 114
>sp|P63427|ACDP_MYCTU Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium
tuberculosis GN=fadE25 PE=3 SV=1
Length = 389
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
++ R A++E+ P AA++D++ FP + + L + G V + EEYGG G D++A +
Sbjct: 22 MRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFNAVHIPEEYGGQGADSVATCI 81
Query: 62 AMEEIAQ 68
+EE+A+
Sbjct: 82 VIEEVAR 88
>sp|P63428|ACDP_MYCBO Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadE25 PE=3 SV=1
Length = 389
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
++ R A++E+ P AA++D++ FP + + L + G V + EEYGG G D++A +
Sbjct: 22 MRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFNAVHIPEEYGGQGADSVATCI 81
Query: 62 AMEEIAQ 68
+EE+A+
Sbjct: 82 VIEEVAR 88
>sp|P11310|ACADM_HUMAN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo
sapiens GN=ACADM PE=1 SV=1
Length = 421
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
Q T R FA++E+ P+AA+ DK +P I++ LGLM + E GG GL T +
Sbjct: 48 FQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACL 107
Query: 62 AMEEIA 67
EE+A
Sbjct: 108 ISEELA 113
>sp|A5A6I0|ACADM_PANTR Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan
troglodytes GN=ACADM PE=2 SV=1
Length = 421
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
Q T R FA++E+ P+AA+ DK +P I++ LGLM + E GG GL T +
Sbjct: 48 FQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACL 107
Query: 62 AMEEIA 67
EE+A
Sbjct: 108 ISEELA 113
>sp|Q3SZB4|ACADM_BOVIN Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos
taurus GN=ACADM PE=2 SV=1
Length = 421
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
Q T R FA++E+ P+AA+ DK +P IK+ LGLM + E GG GL T +
Sbjct: 48 FQATARKFAREEIIPLAAEYDKTGEYPVPLIKRAWELGLMNTHIPESCGGLGLGTFDSCL 107
Query: 62 AMEEIA 67
EE+A
Sbjct: 108 ISEELA 113
>sp|Q5RF40|ACDSB_PONAB Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Pongo abelii GN=ACADSB PE=2 SV=1
Length = 432
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
M++ + + FAQ+++ P+ + +D+ I+ L GLMG+ VD EYGG G L+
Sbjct: 63 MIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTV 122
Query: 61 VAMEEIAQ 68
+ +EE+A+
Sbjct: 123 LVIEELAK 130
>sp|P45954|ACDSB_HUMAN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Homo sapiens GN=ACADSB PE=1 SV=1
Length = 432
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 41/68 (60%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
M++ + + FAQ+++ P+ + +D+ I+ L GLMG+ VD EYGG G L+
Sbjct: 63 MIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTV 122
Query: 61 VAMEEIAQ 68
+ +EE+A+
Sbjct: 123 LVIEELAK 130
>sp|P41367|ACADM_PIG Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADM PE=1 SV=3
Length = 421
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
Q T R FA++E+ P+AA+ D+ +P +K+ LGLM + E +GG GL + +
Sbjct: 48 FQATARKFAREEIIPVAAEYDRTGEYPVPLLKRAWELGLMNTHIPESFGGLGLGIIDSCL 107
Query: 62 AMEEIA 67
EE+A
Sbjct: 108 ITEELA 113
>sp|Q8HXY8|ACADM_MACFA Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Macaca fascicularis GN=ACADM PE=2 SV=1
Length = 421
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
Q T R FA++E+ P+AA+ DK +P I++ LGLM + + GG GL T +
Sbjct: 48 FQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNPHIPQNCGGLGLGTFDACL 107
Query: 62 AMEEIA 67
EE+A
Sbjct: 108 ISEELA 113
>sp|P45952|ACADM_MOUSE Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadm PE=1 SV=1
Length = 421
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
Q T R FA++E+ P+A + DK +P IK+ LGL+ + E GG GL T +
Sbjct: 48 FQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWELGLINAHIPESCGGLGLGTFDACL 107
Query: 62 AMEEIA 67
EE+A
Sbjct: 108 ITEELA 113
>sp|Q5EAD4|ACDSB_BOVIN Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Bos taurus GN=ACADSB PE=2 SV=1
Length = 432
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 40/68 (58%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
M++ + FAQ+++ P +K+D++ I+ L GLMG+ +D +YGG G +
Sbjct: 63 MIKSAVKKFAQEQVAPFVSKMDEDSKMEKSVIQGLFQQGLMGIEIDTKYGGTGASFFSSV 122
Query: 61 VAMEEIAQ 68
+ +EE+A+
Sbjct: 123 LVIEELAK 130
>sp|Q9VSA3|ACADM_DROME Probable medium-chain specific acyl-CoA dehydrogenase,
mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1
SV=1
Length = 419
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
LQ+ R F ++E+ P+AA+ DK +P IKK LGLM + + GG LD +
Sbjct: 44 LQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWELGLMNNHIPADIGGLDLDVFTTCL 103
Query: 62 AMEEIA 67
+ EE+A
Sbjct: 104 SAEELA 109
>sp|Q9FS88|IVD1_SOLTU Isovaleryl-CoA dehydrogenase 1, mitochondrial OS=Solanum tuberosum
GN=IVD1 PE=2 SV=1
Length = 412
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPA--DQIKKLGALGLMGVLVDEEYGGAGLDTLAL 59
+++ FAQ+ + P A K+D+ + FP + K +G L G+ EEYGG L L
Sbjct: 41 FKESVAKFAQENIAPYAEKIDRTNSFPKEINLWKLMGDFNLHGITAPEEYGGLNLGYLYH 100
Query: 60 HVAMEEIAQ 68
+A+EEI++
Sbjct: 101 CIALEEISR 109
>sp|P12007|IVD_RAT Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus
GN=Ivd PE=1 SV=2
Length = 424
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPA--DQIKKLGALGLMGVLVDEEYGGAGLDTLAL 59
L+ T F Q+ L P A ++D+ + F + K+LG+LG++G+ +YGG+GL L
Sbjct: 50 LRHTISKFVQENLAPKAQEIDQSNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEH 109
Query: 60 HVAMEEIAQ 68
+ MEEI++
Sbjct: 110 VLVMEEISR 118
>sp|A8WP91|ACAD2_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 2,
mitochondrial OS=Caenorhabditis briggsae GN=CBG00953
PE=3 SV=2
Length = 408
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
+Q F+++ L P AAK D+ FP + I++ +LGLM + E+YGG G+ TL +
Sbjct: 33 IQAAALKFSKEVLVPNAAKFDESGEFPWEIIRQAHSLGLMNPQIPEKYGGPGMTTLETTL 92
Query: 62 AMEEIA 67
+E ++
Sbjct: 93 IVEALS 98
>sp|Q5RBD5|IVD_PONAB Isovaleryl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=IVD
PE=2 SV=1
Length = 423
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPA--DQIKKLGALGLMGVLVDEEYGGAGLDTLAL 59
L++T F Q+ L P A ++D+ + F + K+LG LG++G+ +YGG+GL L
Sbjct: 49 LRQTVAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEH 108
Query: 60 HVAMEEIAQ 68
+ MEEI++
Sbjct: 109 VLVMEEISR 117
>sp|P70584|ACDSB_RAT Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadsb PE=1 SV=1
Length = 432
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 39/68 (57%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
M+QK + FAQ+++ P+ + +D+ I+ L G+MG+ V+ +YGG L
Sbjct: 63 MMQKAVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGMMGIEVEAKYGGTEASFLCSV 122
Query: 61 VAMEEIAQ 68
+ +EE+A+
Sbjct: 123 LVIEELAK 130
>sp|P08503|ACADM_RAT Medium-chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Rattus norvegicus GN=Acadm PE=1 SV=1
Length = 421
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
Q R FA++E+ P+A DK +P IK+ LGL+ + E GG GL T +
Sbjct: 48 FQTIARKFAREEIIPVAPDYDKSGEYPFPLIKRAWELGLINTHIPESCGGLGLGTFDACL 107
Query: 62 AMEEIA 67
EE+A
Sbjct: 108 ITEELA 113
>sp|Q9JHI5|IVD_MOUSE Isovaleryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Ivd
PE=1 SV=1
Length = 424
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPA--DQIKKLGALGLMGVLVDEEYGGAGLDTLAL 59
L+ T F Q+ L P A ++D+ + F + K+LG+LG++G+ +YGG+GL L
Sbjct: 50 LRHTISKFLQENLAPKAQEIDQTNDFKNLREFWKQLGSLGVLGITAPVQYGGSGLGYLEH 109
Query: 60 HVAMEEIAQ 68
+ MEEI++
Sbjct: 110 VLVMEEISR 118
>sp|P26440|IVD_HUMAN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=IVD
PE=1 SV=1
Length = 423
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPA--DQIKKLGALGLMGVLVDEEYGGAGLDTLAL 59
L++T F Q+ L P A ++D+ + F + K+LG LG++G+ +YGG+GL L
Sbjct: 49 LRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEH 108
Query: 60 HVAMEEIAQ 68
+ MEEI++
Sbjct: 109 VLVMEEISR 117
>sp|A8XNF0|ACAD1_CAEBR Probable medium-chain specific acyl-CoA dehydrogenase 1,
mitochondrial OS=Caenorhabditis briggsae GN=CBG15946
PE=3 SV=1
Length = 417
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
+Q F+++ L P AAK D+ FP + +++ +LGLM + E+YGG G+ TL +
Sbjct: 38 IQAAALKFSKEVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGPGMTTLETAL 97
Query: 62 AMEEIA 67
+E ++
Sbjct: 98 IVEALS 103
>sp|Q54RR5|ACDSB_DICDI Probable short/branched chain specific acyl-CoA dehydrogenase
OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1
Length = 413
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 42/68 (61%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
+L++T +FA ++++P+ +D+ +K L + LMG+ + + YGGA ++ +
Sbjct: 41 LLKETVANFANEKVRPLVKVMDETSELNKGLLKDLFDMNLMGIDISDSYGGANMNFMGSI 100
Query: 61 VAMEEIAQ 68
+A+EE+A+
Sbjct: 101 IAIEELAK 108
>sp|Q3SZI8|IVD_BOVIN Isovaleryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=IVD
PE=2 SV=1
Length = 426
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPA--DQIKKLGALGLMGVLVDEEYGGAGLDTLAL 59
L++T F Q+ L P A ++D+ + F + K+LG LG++G+ +YGG+GL L
Sbjct: 52 LRQTVAKFLQEHLAPQAQEIDQSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGFLEN 111
Query: 60 HVAMEEIAQ 68
+ MEEI++
Sbjct: 112 VLVMEEISR 120
>sp|Q22347|ACADM_CAEEL Probable medium-chain specific acyl-CoA dehydrogenase 10,
mitochondrial OS=Caenorhabditis elegans GN=acdh-10 PE=2
SV=1
Length = 417
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
+Q F++ L P AAK D+ FP + +++ +LGLM + E+YGG G+ TL +
Sbjct: 38 IQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGPGMTTLETAL 97
Query: 62 AMEEIA 67
+E ++
Sbjct: 98 IVEALS 103
>sp|Q9DBL1|ACDSB_MOUSE Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
OS=Mus musculus GN=Acadsb PE=1 SV=1
Length = 432
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
M+++T + FAQ+ + P+ + +D+ I+ L GLMG+ V+ +YGG
Sbjct: 63 MMKQTVKKFAQEHVAPLVSSMDENSKMEKSVIQGLFQQGLMGIEVEAQYGGTEASFFCSV 122
Query: 61 VAMEEIAQ 68
+ +EE+A+
Sbjct: 123 LVIEELAK 130
>sp|Q8JZN5|ACAD9_MOUSE Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus
musculus GN=Acad9 PE=2 SV=2
Length = 625
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 20 KLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGL 54
K+D+E P D ++KL +LGL G+ V EEYGG GL
Sbjct: 90 KIDQEGKIPVDTLEKLKSLGLFGIQVPEEYGGLGL 124
>sp|O32176|FADE_BACSU Probable acyl-CoA dehydrogenase OS=Bacillus subtilis (strain 168)
GN=fadE PE=2 SV=1
Length = 594
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLF--PADQIKKLGALGLMGVLVDEEYGGAGLDTLA 58
M+ KT D+ +Q++ P ++ H F +KK G LGL+G V EEYGG GLD ++
Sbjct: 36 MIAKTTEDYIEQDVLPHIDDIEN-HQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKIS 94
Query: 59 LHVAMEEIAQ 68
+ E+ ++
Sbjct: 95 SALITEKFSR 104
>sp|Q9FS87|IVD2_SOLTU Isovaleryl-CoA dehydrogenase 2, mitochondrial (Fragment)
OS=Solanum tuberosum GN=IVD2 PE=1 SV=1
Length = 401
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPAD--QIKKLGALGLMGVLVDEEYGGAGLDTLAL 59
+++ FAQ+ + P A K+D+ + FP D K +G L+G+ V EEYGG GL L
Sbjct: 30 FKESVAQFAQENIAPHAEKIDRTNYFPQDVNLWKLMGDFNLLGITVPEEYGGLGLGYLYH 89
Query: 60 HVAMEEIAQ 68
+AMEEI++
Sbjct: 90 CIAMEEISR 98
>sp|P15650|ACADL_RAT Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Acadl PE=1 SV=1
Length = 430
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
+ +++ R F Q+E+ P + +K + +K G GL+G+ + E++GG G D L+
Sbjct: 59 IFRESVRKFFQEEVIPYHEEWEKAGEVSRELWEKAGKQGLLGINIAEKHGGIGGDLLSTA 118
Query: 61 VAMEEIA 67
V EE A
Sbjct: 119 VTWEEQA 125
>sp|Q9H845|ACAD9_HUMAN Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo
sapiens GN=ACAD9 PE=1 SV=1
Length = 621
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 20 KLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGL 54
K+D+E P + ++KL +LGL G+ V EEYGG G
Sbjct: 86 KIDQEGKIPDETLEKLKSLGLFGLQVPEEYGGLGF 120
>sp|P51174|ACADL_MOUSE Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus
musculus GN=Acadl PE=2 SV=2
Length = 430
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
+ +++ R F Q+E+ P + +K + +K G GL+G+ + E++GG G D L+
Sbjct: 59 IFRESVRKFFQEEVIPHHTEWEKAGEVSREVWEKAGKQGLLGINIAEKHGGIGGDLLSTA 118
Query: 61 VAMEEIA 67
V EE A
Sbjct: 119 VTWEEQA 125
>sp|Q9SWG0|IVD_ARATH Isovaleryl-CoA dehydrogenase, mitochondrial OS=Arabidopsis thaliana
GN=IVD PE=1 SV=2
Length = 409
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQ--IKKLGALGLMGVLVDEEYGGAGLDTLAL 59
+++ FAQ + P A ++DK + FP D K +G L G+ EEYGG GL L
Sbjct: 38 FKESVSKFAQDNIAPHAERIDKTNSFPKDVNLWKLMGEFNLHGITAPEEYGGLGLGYLYH 97
Query: 60 HVAMEEIAQ 68
+AMEEI++
Sbjct: 98 CIAMEEISR 106
>sp|P79274|ACADL_PIG Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus
scrofa GN=ACADL PE=2 SV=1
Length = 430
Score = 36.2 bits (82), Expect = 0.062, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALH 60
+ +++ R F Q+E+ P A+ +K + +K G GL+G+ + E +GG G D +
Sbjct: 59 IFRESVRKFFQEEVIPHHAEWEKAGEVSRELWEKAGKQGLLGINIAERHGGIGGDLYSAA 118
Query: 61 VAMEEIA 67
+ EE A
Sbjct: 119 IVWEEQA 125
>sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal OS=Arabidopsis thaliana
GN=ACX4 PE=1 SV=1
Length = 436
Score = 35.8 bits (81), Expect = 0.081, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHV 61
++K R+ ++E+ PI + ++ FP KLGA+G+ G + + YG GL A +
Sbjct: 62 IRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSI-KGYGCPGLSITANAI 120
Query: 62 AMEEIAQ 68
A EIA+
Sbjct: 121 ATAEIAR 127
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,834,639
Number of Sequences: 539616
Number of extensions: 890342
Number of successful extensions: 2148
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2046
Number of HSP's gapped (non-prelim): 101
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)