Query psy1305
Match_columns 68
No_of_seqs 149 out of 1254
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 18:09:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1305.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1305hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfd_A Acyl-COA dehydrogenase; 99.7 2.6E-16 8.9E-21 92.5 8.3 67 2-68 26-92 (393)
2 2jif_A Short/branched chain sp 99.7 4.3E-16 1.5E-20 92.0 8.4 67 2-68 36-102 (404)
3 1rx0_A Acyl-COA dehydrogenase 99.7 4.6E-16 1.6E-20 91.5 8.0 67 2-68 26-92 (393)
4 3r7k_A Probable acyl COA dehyd 99.7 2.5E-16 8.4E-21 92.9 6.6 67 2-68 36-102 (403)
5 3p4t_A Putative acyl-COA dehyd 99.7 3.3E-16 1.1E-20 92.4 6.7 67 2-68 33-99 (403)
6 3nf4_A Acyl-COA dehydrogenase; 99.6 6E-16 2E-20 90.7 6.8 67 2-68 23-89 (387)
7 2pg0_A Acyl-COA dehydrogenase; 99.6 1.1E-15 3.7E-20 89.7 7.4 67 2-68 17-83 (385)
8 3ii9_A Glutaryl-COA dehydrogen 99.6 4.6E-16 1.6E-20 91.5 5.9 67 2-68 26-92 (396)
9 2dvl_A Acyl-COA dehydrogenase; 99.6 1.2E-15 4.1E-20 89.2 7.0 67 2-68 10-76 (372)
10 1ukw_A Acyl-COA dehydrogenase; 99.6 2.5E-15 8.7E-20 87.9 8.2 67 2-68 12-78 (379)
11 2d29_A Acyl-COA dehydrogenase; 99.6 1.9E-15 6.4E-20 88.7 7.7 67 2-68 14-80 (387)
12 2vig_A Short-chain specific ac 99.6 2.5E-15 8.5E-20 88.3 7.9 67 2-68 13-79 (391)
13 1egd_A Medium chain acyl-COA d 99.6 3.1E-15 1.1E-19 88.0 7.8 67 2-68 23-89 (396)
14 2eba_A Putative glutaryl-COA d 99.6 1.7E-15 5.9E-20 88.8 6.5 67 2-68 18-84 (385)
15 1r2j_A Protein FKBI; polyketid 99.6 1.5E-15 5.3E-20 88.6 5.7 65 4-68 2-66 (366)
16 3mpi_A Glutaryl-COA dehydrogen 99.6 1.2E-15 4.1E-20 89.7 5.1 67 2-68 12-81 (397)
17 1ivh_A Isovaleryl-COA dehydrog 99.6 3.2E-15 1.1E-19 87.9 6.7 67 2-68 20-88 (394)
18 1buc_A Butyryl-COA dehydrogena 99.6 2.6E-15 8.8E-20 88.0 6.1 67 2-68 12-81 (383)
19 2rfq_A 3-HSA hydroxylase, oxyg 99.6 9.1E-15 3.1E-19 85.8 8.1 66 2-68 12-77 (394)
20 4hr3_A Putative acyl-COA dehyd 99.6 2.5E-15 8.6E-20 88.8 5.4 67 2-68 16-100 (415)
21 3owa_A Acyl-COA dehydrogenase; 99.6 4E-15 1.4E-19 91.6 6.1 68 1-68 39-107 (597)
22 2jbr_A P-hydroxyphenylacetate 99.6 1E-14 3.5E-19 86.4 7.6 67 1-68 39-105 (422)
23 2or0_A Hydroxylase; APC7385, r 99.6 8.7E-15 3E-19 86.5 6.9 66 2-68 25-90 (414)
24 3mxl_A Nitrososynthase; flavin 99.6 7.5E-15 2.6E-19 86.1 5.9 66 2-68 16-82 (395)
25 3sf6_A Glutaryl-COA dehydrogen 99.5 2.2E-14 7.4E-19 84.7 7.3 66 2-68 37-103 (403)
26 2ix5_A Acyl-coenzyme A oxidase 99.5 9.4E-15 3.2E-19 87.2 5.7 66 2-68 62-127 (436)
27 3mkh_A Nitroalkane oxidase; ox 99.5 5.8E-15 2E-19 87.7 4.5 68 1-68 13-87 (438)
28 3swo_A Glutaryl-COA dehydrogen 99.5 1.6E-14 5.6E-19 85.0 6.0 66 2-68 33-98 (399)
29 3m9v_A FAD-dependent oxidoredu 99.5 4.2E-14 1.4E-18 84.1 6.4 66 2-68 27-93 (439)
30 2c12_A Nitroalkane oxidase; ox 99.5 2.4E-14 8.4E-19 85.1 5.3 67 2-68 13-85 (439)
31 1siq_A GCD, glutaryl-COA dehyd 99.5 9.3E-14 3.2E-18 81.6 6.8 66 2-68 21-86 (392)
32 2z1q_A Acyl-COA dehydrogenase; 99.4 2.3E-13 8E-18 83.5 6.7 66 2-67 35-101 (577)
33 2uxw_A VERY-long-chain specifi 99.4 5.6E-13 1.9E-17 82.3 7.1 65 2-68 57-121 (607)
34 2wbi_A Acyl-COA dehydrogenase 99.0 1.6E-10 5.3E-15 68.8 2.9 64 2-68 30-106 (428)
35 1w07_A Acyl-COA oxidase; oxido 96.3 0.00094 3.2E-08 42.0 0.8 61 2-67 34-94 (659)
36 3djl_A Protein AIDB; alpha hel 95.2 0.0067 2.3E-07 37.5 1.4 36 29-64 89-126 (541)
37 1r5l_A Alpha-TTP, protein (alp 59.1 11 0.00039 20.6 3.1 18 43-60 223-240 (262)
38 3ro3_B Minsc, peptide of prote 55.0 7.5 0.00026 13.4 1.5 10 3-12 7-16 (22)
39 2cz4_A Hypothetical protein TT 46.2 15 0.00051 18.3 2.0 25 29-54 38-62 (119)
40 1o51_A Hypothetical protein TM 38.8 29 0.001 17.1 2.4 29 28-56 32-60 (114)
41 3kdv_A DDRB, DNA damage respon 37.7 33 0.0011 18.3 2.6 27 29-57 31-57 (184)
42 3k69_A Putative transcription 35.2 30 0.001 17.9 2.2 31 21-52 38-68 (162)
43 3ewt_E Tumor necrosis factor r 34.4 22 0.00075 12.8 1.4 10 3-12 13-22 (25)
44 2eee_A Uncharacterized protein 31.8 55 0.0019 16.6 4.7 36 30-65 99-135 (149)
45 2l5q_A Uncharacterized protein 31.8 58 0.002 16.9 3.9 41 4-48 88-134 (142)
46 3kp1_E D-ornithine aminomutase 29.0 35 0.0012 17.2 1.7 17 29-45 65-81 (121)
47 1aua_A Phosphatidylinositol tr 27.4 20 0.00068 20.2 0.8 12 42-53 254-265 (296)
48 3dfe_A Putative PII-like signa 26.5 36 0.0012 16.6 1.5 24 29-53 19-42 (111)
49 3hx3_A Retinaldehyde-binding p 26.0 22 0.00075 20.4 0.8 13 42-54 281-293 (316)
50 2jyc_A Uncharacterized protein 25.7 78 0.0027 16.4 4.1 36 30-65 110-146 (160)
51 1x8d_A Hypothetical protein YI 25.4 33 0.0011 16.6 1.3 21 25-45 23-43 (104)
52 3q8g_A CRAL-TRIO domain-contai 23.0 27 0.00092 20.2 0.8 11 42-52 269-279 (320)
53 2dcl_A Hypothetical UPF0166 pr 22.2 33 0.0011 17.3 0.9 29 28-56 28-56 (127)
54 2qlw_A RHAU; mutarotase, isome 21.9 48 0.0017 17.2 1.5 21 25-45 63-83 (144)
55 3cqy_A Anhydro-N-acetylmuramic 20.9 96 0.0033 18.7 2.8 35 21-55 215-249 (370)
56 1esw_A Amylomaltase; (beta,alp 20.8 61 0.0021 20.3 2.0 23 24-46 342-364 (500)
57 1xd7_A YWNA; structural genomi 20.7 38 0.0013 17.0 1.0 24 27-52 39-62 (145)
58 1tz7_A 4-alpha-glucanotransfer 20.3 65 0.0022 20.2 2.1 22 25-46 356-377 (505)
No 1
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=99.68 E-value=2.6e-16 Score=92.52 Aligned_cols=67 Identities=36% Similarity=0.688 Sum_probs=64.2
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...+.|+.+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 26 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela~ 92 (393)
T 3pfd_A 26 LREAIRALAEKEIAPYAAEVDEKARFPEEALAALNSSGFSAIHVPEEYGGQGADSVATCIVIEEVAR 92 (393)
T ss_dssp HHHHHHHHHHHHTGGGHHHHHHTTCCCHHHHHHHHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCchHHHHHhhhCCCCHHHHHHHHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHHh
Confidence 7899999999999999888999999999999999999999999999999999999999999999985
No 2
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=99.67 E-value=4.3e-16 Score=92.02 Aligned_cols=67 Identities=33% Similarity=0.625 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...++|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 36 l~~~~r~~~~~~~~p~~~~~d~~~~~~~~~~~~l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~ 102 (404)
T 2jif_A 36 IKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAK 102 (404)
T ss_dssp HHHHHHHHHHHHTGGGHHHHHHHTCCCHHHHHHHHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCcccHHHHhhcCCCCHHHHHHHHHCCCCccCCchhhCCCCCCHHHHHHHHHHHHh
Confidence 7899999999999998888888899999999999999999999999999999999999999999985
No 3
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.66 E-value=4.6e-16 Score=91.55 Aligned_cols=67 Identities=39% Similarity=0.676 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+.+++.|...++|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 26 ~~~~~r~~~~~~~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~ 92 (393)
T 1rx0_A 26 FQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALAT 92 (393)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTCCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCccHHHHhhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHH
Confidence 6899999999999998888888899999999999999999999999999999999999999999985
No 4
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=99.66 E-value=2.5e-16 Score=92.93 Aligned_cols=67 Identities=27% Similarity=0.453 Sum_probs=63.9
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...++|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 36 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~ 102 (403)
T 3r7k_A 36 LSQMARSFVEREIAPKLAEWEHVGEIPRDLHLNAAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILA 102 (403)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHTSCCTHHHHHHHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHh
Confidence 7899999999999999888999999999999999999999999999999999999999999999974
No 5
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=99.65 E-value=3.3e-16 Score=92.39 Aligned_cols=67 Identities=34% Similarity=0.492 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...+.|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 33 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~ 99 (403)
T 3p4t_A 33 LRKTVRAFAEREVLPHAHEWERAGEIPRELHRKAAELGLLGAGFPEDAGGSGGDGADPVVICEEMHY 99 (403)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHH
Confidence 7899999999999999888999999999999999999999999999999999999999999999974
No 6
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=99.64 E-value=6e-16 Score=90.73 Aligned_cols=67 Identities=33% Similarity=0.561 Sum_probs=64.0
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...++|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 23 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~ 89 (387)
T 3nf4_A 23 LIELTREIADKVLDPIVDRHEKDETYPEGVFEQLGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAA 89 (387)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHTCCCTTHHHHHHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCccHHHHhhhCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHH
Confidence 6899999999999999888999999999999999999999999999999999999999999999975
No 7
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=99.63 E-value=1.1e-15 Score=89.66 Aligned_cols=67 Identities=28% Similarity=0.433 Sum_probs=63.5
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...++|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 17 l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~ 83 (385)
T 2pg0_A 17 FRAAFRKFLEKEAYPHYNDWEKRGIIPRSFWAKMGENGFLCPWVDEKYGGLNADFAYSVVINEELEK 83 (385)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHTSCCHHHHHHHHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCchhHHHHHhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHh
Confidence 6899999999999998888888899999999999999999999999999999999999999999974
No 8
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=99.63 E-value=4.6e-16 Score=91.53 Aligned_cols=67 Identities=25% Similarity=0.533 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...+.+.++.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 26 l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~~ 92 (396)
T 3ii9_A 26 VRDAAHAYAQGKLAPRVTEAFRHETTDAAIFREMGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVER 92 (396)
T ss_dssp HHHHHHHHCCCCCHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTSCGGGTSCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHH
Confidence 6899999999999998888898999999999999999999999999999999999999999999985
No 9
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=99.62 E-value=1.2e-15 Score=89.15 Aligned_cols=67 Identities=37% Similarity=0.682 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...+.|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 10 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 76 (372)
T 2dvl_A 10 VLDAVRRVAREVLYPLAPEYDRKAEYPWPQLKALAELGLLGMTTPEEWGGVGLDSVTWALALEELAA 76 (372)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHh
Confidence 6899999999999888888888899999999999999999999999999999999999999999974
No 10
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=99.62 E-value=2.5e-15 Score=87.95 Aligned_cols=67 Identities=37% Similarity=0.603 Sum_probs=63.3
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...++|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 12 l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~ 78 (379)
T 1ukw_A 12 LQALARRFAKEVILPVAQEYDEKEEVPWPVIEKLHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAY 78 (379)
T ss_dssp HHHHHHHHHHHTTGGGHHHHHHHTCCCHHHHHHHHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHH
Confidence 6889999999999998888888899999999999999999999999999999999999999999874
No 11
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=99.62 E-value=1.9e-15 Score=88.69 Aligned_cols=67 Identities=40% Similarity=0.638 Sum_probs=63.3
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...+.|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 14 l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 80 (387)
T 2d29_A 14 VLGPFREFLKAEVAPGAAERDRTGAFPWDLVRKLAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAY 80 (387)
T ss_dssp HHHHHHHHHHHHTGGGHHHHHHHCCCCHHHHHHHHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHh
Confidence 6889999999999998888888899999999999999999999999999999999999999999974
No 12
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=99.62 E-value=2.5e-15 Score=88.34 Aligned_cols=67 Identities=66% Similarity=1.033 Sum_probs=63.3
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...++|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 13 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 79 (391)
T 2vig_A 13 LLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISR 79 (391)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccHHHHHhcCCCCHHHHHHHHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHh
Confidence 6889999999999998888888899999999999999999999999999999999999999999874
No 13
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=99.61 E-value=3.1e-15 Score=88.02 Aligned_cols=67 Identities=39% Similarity=0.612 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...+.|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 23 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 89 (396)
T 1egd_A 23 FQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGLGTFDACLISEELAY 89 (396)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHCCCCHHHHHHHHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCchhHHHHHhhCCCCHHHHHHHHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHh
Confidence 6889999999999998888888899999999999999999999999999999999999999999874
No 14
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=99.61 E-value=1.7e-15 Score=88.81 Aligned_cols=67 Identities=31% Similarity=0.552 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+.+++.|...+.|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 18 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~ 84 (385)
T 2eba_A 18 VQKAARRFLEKEALPHIRDWWEEGVFPTHLIPRFAELGFLGPTLPPEYGGAGVSSAAYGLICYELER 84 (385)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHTTCCCGGGHHHHHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCccHHHHHHhCCCCHHHHHHHHHCCCcCCCCchhhCCCCCCHHHHHHHHHHHHH
Confidence 6899999999999998888888889999999999999999999999999999999999999999974
No 15
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=99.60 E-value=1.5e-15 Score=88.60 Aligned_cols=65 Identities=25% Similarity=0.280 Sum_probs=60.7
Q ss_pred HHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 4 KTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++++|+++++.|...++|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 2 ~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~ 66 (366)
T 1r2j_A 2 PERDALLTDLVGDRAAEWDTSGELPRDLLVRLGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGS 66 (366)
T ss_dssp -CCHHHHHHHHSSCHHHHHHHTCCCHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHH
Confidence 56899999999998888898899999999999999999999999999999999999999999974
No 16
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=99.60 E-value=1.2e-15 Score=89.71 Aligned_cols=67 Identities=40% Similarity=0.799 Sum_probs=63.5
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCC-HHHHHHHHHcCCCcccCCcccCCCCC--CHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFP-ADQIKKLGALGLMGVLVDEEYGGAGL--DTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~G~~~~~~p~~~GG~g~--~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...++|..+.+| +++|+.+.+.||+++.+|++|||.|+ ++.+.+.+.|++++
T Consensus 12 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela~ 81 (397)
T 3mpi_A 12 LQKEVRNFVNKKIVPFADQWDNENHFPYEEAVRPMGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIAR 81 (397)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHTCCCTTTTHHHHHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCChhHHHHHhcCCCCHHHHHHHHHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHHh
Confidence 789999999999999988999999999 99999999999999999999999999 99999999999874
No 17
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=99.59 E-value=3.2e-15 Score=87.93 Aligned_cols=67 Identities=37% Similarity=0.665 Sum_probs=63.1
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCH--HHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPA--DQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...+.|..+.+|. ++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 20 l~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~ 88 (394)
T 1ivh_A 20 LRQTMAKFLQEHLAPKAQEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISR 88 (394)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHTCCTTHHHHHHHHHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCChhHHHHHhcCCCCchHHHHHHHHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHh
Confidence 6899999999999998888888899998 999999999999999999999999999999999999874
No 18
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=99.59 E-value=2.6e-15 Score=87.95 Aligned_cols=67 Identities=33% Similarity=0.639 Sum_probs=63.4
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCC---CCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAG---LDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g---~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...++|..+.+|+++|+.+.+.||+++.+|++|||.| +++.+.+.+.|++++
T Consensus 12 l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~~ 81 (383)
T 1buc_A 12 FLKLAHDFGEKKLAPTVTERDHKGIYDKELIDELLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAK 81 (383)
T ss_dssp HHHHHHHHHHHTTTTTHHHHHHHTCCCHHHHHHHHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCchhHHHHhhcCCCCHHHHHHHHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHHh
Confidence 6889999999999998888898899999999999999999999999999999 999999999999974
No 19
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=99.58 E-value=9.1e-15 Score=85.78 Aligned_cols=66 Identities=23% Similarity=0.369 Sum_probs=61.8
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++ +.|...++|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 12 l~~~~~~~~~~-~~~~~~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~ 77 (394)
T 2rfq_A 12 VMQRLDALLPT-LRERAQETEDLRRIPDDSMKALQETGFFRLLQPEQWGGYQADPVLFYSAVRKIAS 77 (394)
T ss_dssp HHHHHHHHHHH-HHHTHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCceecCchhhCCCCCCHHHHHHHHHHHHh
Confidence 68899999985 8888888888899999999999999999999999999999999999999999985
No 20
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=99.58 E-value=2.5e-15 Score=88.80 Aligned_cols=67 Identities=21% Similarity=0.279 Sum_probs=59.5
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhC------------------CCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHH
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEH------------------LFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAM 63 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~ 63 (68)
+++.+++|+++++.|...+.+..+ .+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.
T Consensus 16 l~~~~r~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~G~~~~~~P~~~GG~g~~~~~~~~v~ 95 (415)
T 4hr3_A 16 LIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPDPELGGGLSNSEYAPLA 95 (415)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCSCSGGGGSCCTHHHHHHHHHHHTTCSSTTCCCTTTSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCccHHHHhhhccccccccccccccccCcchhHHHHHHHHHhCCCcCcCCCHHHCCCCCCHHHHHHHH
Confidence 789999999999888776665432 26689999999999999999999999999999999999
Q ss_pred HHHhC
Q psy1305 64 EEIAQ 68 (68)
Q Consensus 64 e~l~~ 68 (68)
|++++
T Consensus 96 eel~~ 100 (415)
T 4hr3_A 96 EQMGR 100 (415)
T ss_dssp HHHTT
T ss_pred HHHhc
Confidence 99985
No 21
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=99.57 E-value=4e-15 Score=91.63 Aligned_cols=68 Identities=35% Similarity=0.563 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHhhhchhHHHhhhhC-CCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 1 MLQKTCRDFAQQELKPIAAKLDKEH-LFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
++++.+++|+++++.|...+++..+ .+|+++|+.+++.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 39 ~l~~~vr~f~~~~~~p~~~~~d~~~~~~~~~~~~~l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~ 107 (597)
T 3owa_A 39 MIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSR 107 (597)
T ss_dssp HHHHHHHHHHHHHTGGGHHHHTTTCHHHHHHHHHHHHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhCchhHHHHHhcCCcCCHHHHHHHHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHc
Confidence 3789999999999999888887765 6789999999999999999999999999999999999999975
No 22
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=99.57 E-value=1e-14 Score=86.40 Aligned_cols=67 Identities=16% Similarity=0.278 Sum_probs=62.2
Q ss_pred CHHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 1 MLQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
++++.+++|+. .+.|...+.|..+.+|+++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 39 ~l~~~~r~~~~-~~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~ 105 (422)
T 2jbr_A 39 SMLEKIQQILP-QIAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAG 105 (422)
T ss_dssp CHHHHHHHHHH-HHHHTHHHHHHHTSCCHHHHHHHHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHhhHHHHHcCCCCHHHHHHHHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHh
Confidence 47899999998 58888888888899999999999999999999999999999999999999999974
No 23
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=99.57 E-value=8.7e-15 Score=86.47 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++ +.|...+.|..+.+|+++|+.|.+.||+++.+|++|||.|+++.+.+.+.+++++
T Consensus 25 l~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~ 90 (414)
T 2or0_A 25 VLDRIEVVAEE-IRGQAVQSEADCRLTDAAAGLLRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAA 90 (414)
T ss_dssp HHHHHHHTHHH-HHHHHHHHHHHTSCCHHHHHHHHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHhHHHHHhcCCCCHHHHHHHHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHh
Confidence 68899999986 8888888888899999999999999999999999999999999999999999974
No 24
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=99.55 E-value=7.5e-15 Score=86.09 Aligned_cols=66 Identities=26% Similarity=0.439 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCC-CCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAG-LDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g-~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+.+ +.|.+.++|+++.+|+++|+.+.+.||+++.+|++|||.| .++.+.+.+.|++++
T Consensus 16 ~~~~~r~~~~~-~~~~a~~~d~~~~~p~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~ 82 (395)
T 3mxl_A 16 VVDLLAGVIPR-ISAEAADRDRTGTFPVEAFEQFAKLGLMGATVPAELGGLGLTRLYDVATALMRLAE 82 (395)
T ss_dssp HHHHHTTTHHH-HHHHHHHHHHHTCCCHHHHHHHHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-HhhchHHHhhhCCCCHHHHHHHHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHh
Confidence 67899999974 7888889999999999999999999999999999999999 999999999999985
No 25
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=99.55 E-value=2.2e-14 Score=84.67 Aligned_cols=66 Identities=30% Similarity=0.540 Sum_probs=62.8
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCC-HHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFP-ADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+.+++.|...+.+.++.+| +++|+.+.+.||+++.+ ++|||.|+++.+.+.+.|++++
T Consensus 37 l~~~~r~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eela~ 103 (403)
T 3sf6_A 37 IRDTVRSVVQRRIKPHIASWYEDGELPARELAVELGELGLLGMHL-KGYGCAGMSAVAYGLACLELEA 103 (403)
T ss_dssp HHHHHHHHHHHHTTTTHHHHHHHTCCCHHHHHHHHHHTTCSSTTS-CSTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChhHHHHHhcCCCCHHHHHHHHHHCCCCcccc-hhhCCCCCCHHHHHHHHHHHHH
Confidence 689999999999999988899999999 99999999999999999 9999999999999999999974
No 26
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=99.54 E-value=9.4e-15 Score=87.16 Aligned_cols=66 Identities=33% Similarity=0.532 Sum_probs=61.5
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...+++..+.+|+++|+.+.+.||+++.+| +|||.|+++.+...+.|++++
T Consensus 62 l~~~~r~f~~~~~~p~~~~~~~~~~~p~~~~~~l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~eela~ 127 (436)
T 2ix5_A 62 IRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIK-GYGCPGLSITANAIATAEIAR 127 (436)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTCCCGGGHHHHHTTTCTTTTCC-STTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCChhhHHHHhcCCCCHHHHHHHHHcCCCcCcCC-CCCCCCCCHHHHHHHHHHHHh
Confidence 689999999999999887777788899999999999999999999 999999999999999999874
No 27
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=99.54 E-value=5.8e-15 Score=87.72 Aligned_cols=68 Identities=16% Similarity=0.185 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHhhhchhHHHhhh----hC-CCC--HHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 1 MLQKTCRDFAQQELKPIAAKLDK----EH-LFP--ADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~--~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
++++.+++|+++++.|...+++. .+ .+| +++|+++.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 13 ~l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~ 87 (438)
T 3mkh_A 13 GTYQAARSLARNLLMPARQTYLQHPPNSPLRFQSTQPTYAAAVSAGILKGQISPAHGGTGGTLIESAILVEECYS 87 (438)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHTTSCTTCHHHHHTTHHHHHHHHHTTTTGGGSCGGGTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcHHHHHhhccccccCcCCCcHHHHHHHHhCCCCCCCCCcccCCCCCCHHHHHHHHHHHHh
Confidence 37899999999999988766643 22 455 8999999999999999999999999999999999999874
No 28
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=99.53 E-value=1.6e-14 Score=85.04 Aligned_cols=66 Identities=27% Similarity=0.524 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+.+++.|...+.+.++.+|+++|+.+.+.||+++.+ ++|||.|+++.+.+.+.|++++
T Consensus 33 l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eel~~ 98 (399)
T 3swo_A 33 IAATVRQFVDTRLKPNVEGWFESATLPSELAKEFGNLGVLGMHL-QGYGCAGTNAVSYGLACMELEA 98 (399)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTCCCTTHHHHHHHHTCTTTTS-CSTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCChhHHHHHhhCCCCHHHHHHHHHCCCCcCCh-hhhCCCCCCHHHHHHHHHHHHH
Confidence 78999999999999988888988999999999999999999999 9999999999999999999974
No 29
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=99.51 E-value=4.2e-14 Score=84.08 Aligned_cols=66 Identities=30% Similarity=0.449 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCC-CCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAG-LDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g-~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+. .+.|.+.+.|+++.+|.++|+.|++.||+++.+|++|||.| .++.+++.+.|++++
T Consensus 27 l~~~~r~~~~-~~~~~a~~~d~~~~~~~~~~~~l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~ 93 (439)
T 3m9v_A 27 LLDRLAAHLP-RIRSTAAEHDRDGTFPTDTFDALRKDGLMGATVPAELGGLGVDRLYDVAVALLAVAR 93 (439)
T ss_dssp HHHHHHTTHH-HHHHHHHHHHHHTCCCHHHHHHHHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHhhhHHHHHhcCCCCHHHHHHHHHCCCccCCCChhhCCCCCCCHHHHHHHHHHHHh
Confidence 6789999997 47888888999999999999999999999999999999999 899999999999874
No 30
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=99.51 E-value=2.4e-14 Score=85.12 Aligned_cols=67 Identities=18% Similarity=0.232 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhhhchhHHHhhhh----CCCC--HHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKE----HLFP--ADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|...+++.. +.+| +++|+.+.+.||+++.+|++|||.|+++.+.+.+.|++++
T Consensus 13 l~~~~r~f~~~~~~p~~~~~d~~~~~~~~~~~~~~~~~~l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~ 85 (439)
T 2c12_A 13 ARRHAQAFANTVLTKASAEYSTQKDQLSRFQATRPFYREAVRHGLIKAQVPIPLGGTMESLVHESIILEELFA 85 (439)
T ss_dssp HHHHHHHHHHHTGGGHHHHHTTCSSHHHHHHTTHHHHHHHHHTTTTGGGSBGGGTCCBCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCChhHHHHhhcccccCCCCChHHHHHHHHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHh
Confidence 68999999999999987766643 3455 8999999999999999999999999999999999999975
No 31
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=99.49 E-value=9.3e-14 Score=81.63 Aligned_cols=66 Identities=26% Similarity=0.563 Sum_probs=61.9
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++++++|+++++.|...+.+..+.+|+++|+.+++.||+++.+ ++|||.|+++.+.+.+.|++++
T Consensus 21 l~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~-~~~GG~g~~~~~~~~~~eel~~ 86 (392)
T 1siq_A 21 IRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTI-KGYGCAGVSSVAYGLLARELER 86 (392)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTCCCTHHHHHHHHTTCSSTTC-EETTEECCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCcchHHHHhhCCCCHHHHHHHHhCCCCcccH-HhhCCCCCCHHHHHHHHHHHHH
Confidence 68999999999998888888888899999999999999999999 9999999999999999999975
No 32
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=99.45 E-value=2.3e-13 Score=83.46 Aligned_cols=66 Identities=30% Similarity=0.574 Sum_probs=58.2
Q ss_pred HHHHHHHHHHhhhchhHHHhhhh-CCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHh
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKE-HLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIA 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~ 67 (68)
+++.+++|+++++.|...+.+.. ..+|+++|+.+++.||+++.+|++|||.|+++.+...+.|+++
T Consensus 35 l~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel~ 101 (577)
T 2z1q_A 35 IARTTRTFVEREVLPLLERMEHGELELNVPLMRKAGELGLLAIDVPEEYGGLDLPKVISTVVAEELS 101 (577)
T ss_dssp HHHHHHHHHHTTTHHHHHHHHTTCGGGHHHHHHHHHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCchhHHhhhcccCCCCHHHHHHHHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHh
Confidence 68999999999898875554432 3789999999999999999999999999999999999999984
No 33
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=99.42 E-value=5.6e-13 Score=82.28 Aligned_cols=65 Identities=26% Similarity=0.351 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++.+.| ...|....+|+++|+.+++.||+++.+|++|||.|++..+...+.|++++
T Consensus 57 l~~~~~~~~~~~~~~--~~~d~~~~~p~~~~~~l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~ 121 (607)
T 2uxw_A 57 LVEPVSRFFEEVNDP--AKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGM 121 (607)
T ss_dssp HHHHHHHHHHHTCCH--HHHHHHTSCCHHHHHHHHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCH--HHhccccCCCHHHHHHHHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHH
Confidence 678999999988765 34566788999999999999999999999999999999999999999873
No 34
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=99.01 E-value=1.6e-10 Score=68.76 Aligned_cols=64 Identities=14% Similarity=0.210 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhhhchhHH---Hhhhh-----CC-----CCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHhC
Q psy1305 2 LQKTCRDFAQQELKPIAA---KLDKE-----HL-----FPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIAQ 68 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~---~~~~~-----~~-----~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~~ 68 (68)
+++.+++|+++++.|... +++.. .. +++++|+.+.+.||+++.+|+ |.|+++.+.+.+.|++++
T Consensus 30 l~~~~r~f~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~~l~~P~---G~g~~~~~~~~v~eel~~ 106 (428)
T 2wbi_A 30 VLIKVKHFMKQHILPAEKEVTEFYVQNENSVDKWGKPLVIDKLKEMAKVEGLWNLFLPA---VSGLSHVDYALIAEETGK 106 (428)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHC----------CCSCCHHHHHHHHHHHHTTCCSTTCHH---HHCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhCCchhcchhHHhhhccccccccCCcccHHHHHHHHHHCCCCeecCCC---CCCCCHHHHHHHHHHHHh
Confidence 789999999999888665 54432 12 348899999999999999999 889999999999999985
No 35
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=96.31 E-value=0.00094 Score=42.04 Aligned_cols=61 Identities=7% Similarity=-0.234 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhhchhHHHhhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCCHHHHHHHHHHHh
Q psy1305 2 LQKTCRDFAQQELKPIAAKLDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLDTLALHVAMEEIA 67 (68)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~~~~~~~~~e~l~ 67 (68)
+++.+++|+.+..... ...+....++++.|+.+++.|++. .+|++|| ++..+...+.++++
T Consensus 34 lr~~vr~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~l~-~~p~e~G---~~~~~~~~v~e~~~ 94 (659)
T 1w07_A 34 VSDRIARLVASDPVFE-KSNRARLSRKELFKSTLRKCAHAF-KRIIELR---LNEEEAGRLRHFID 94 (659)
T ss_dssp HHHHHHHHHHTCGGGC-CTTTTSSCHHHHHHHHHHHHHHHH-HHHHHTT---CCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCcccc-cCCccCCChHHHHHHHHHHHHHHH-HhHHHhC---CCchHHHHHHHHhc
Confidence 6788899988753221 111122356789999999988887 4788887 45566666666553
No 36
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=95.22 E-value=0.0067 Score=37.50 Aligned_cols=36 Identities=8% Similarity=-0.003 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCCCcccC--CcccCCCCCCHHHHHHHHH
Q psy1305 29 ADQIKKLGALGLMGVLV--DEEYGGAGLDTLALHVAME 64 (68)
Q Consensus 29 ~~~~~~l~~~G~~~~~~--p~~~GG~g~~~~~~~~~~e 64 (68)
+++++.+.+.||+++.+ |++|||.+........+.+
T Consensus 89 ~~~~~~l~e~Gl~~l~~~~p~~~Gg~~~~~~~~~~~~~ 126 (541)
T 3djl_A 89 HLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLHAQ 126 (541)
T ss_dssp HHHHHHHHHTTTTTGGGSTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcccCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 68999999999999999 7999977665555444433
No 37
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=59.08 E-value=11 Score=20.59 Aligned_cols=18 Identities=22% Similarity=0.414 Sum_probs=14.3
Q ss_pred ccCCcccCCCCCCHHHHH
Q psy1305 43 VLVDEEYGGAGLDTLALH 60 (68)
Q Consensus 43 ~~~p~~~GG~g~~~~~~~ 60 (68)
-.+|++|||..-+..+..
T Consensus 223 ~~LP~~yGG~~~~~~~~~ 240 (262)
T 1r5l_A 223 DILPLEYGGEEFSMEDIC 240 (262)
T ss_dssp TTSCGGGTCSSCCHHHHH
T ss_pred hhCcHhhCCCCCCHHHHH
Confidence 678999999987766553
No 38
>3ro3_B Minsc, peptide of protein inscuteable homolog; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=55.01 E-value=7.5 Score=13.45 Aligned_cols=10 Identities=0% Similarity=0.242 Sum_probs=7.3
Q ss_pred HHHHHHHHHh
Q psy1305 3 QKTCRDFAQQ 12 (68)
Q Consensus 3 ~~~~~~~~~~ 12 (68)
.|++++|+++
T Consensus 7 vDSV~rWmeD 16 (22)
T 3ro3_B 7 VDSVQRWMED 16 (26)
T ss_pred hHHHHHHHHH
Confidence 4778888765
No 39
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=46.24 E-value=15 Score=18.27 Aligned_cols=25 Identities=20% Similarity=0.348 Sum_probs=19.4
Q ss_pred HHHHHHHHHcCCCcccCCcccCCCCC
Q psy1305 29 ADQIKKLGALGLMGVLVDEEYGGAGL 54 (68)
Q Consensus 29 ~~~~~~l~~~G~~~~~~p~~~GG~g~ 54 (68)
+++.+.|.+.|+.++++. +--|.|.
T Consensus 38 e~V~~aL~~~Gi~G~TV~-~V~G~G~ 62 (119)
T 2cz4_A 38 KRLVEEVKRLGAKGYTIT-PARGEGS 62 (119)
T ss_dssp HHHHHHHHHTTCCCCEEE-EEBCTTC
T ss_pred HHHHHHHHhCCCCcEEEc-CCEEecC
Confidence 689999999999999994 4445443
No 40
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=38.75 E-value=29 Score=17.11 Aligned_cols=29 Identities=28% Similarity=0.250 Sum_probs=22.2
Q ss_pred CHHHHHHHHHcCCCcccCCcccCCCCCCH
Q psy1305 28 PADQIKKLGALGLMGVLVDEEYGGAGLDT 56 (68)
Q Consensus 28 ~~~~~~~l~~~G~~~~~~p~~~GG~g~~~ 56 (68)
-+.+++.+.+.|+-+.++=....|.|-+-
T Consensus 32 ~~~Iv~~~~~~GiaGaTV~rgi~GfG~~g 60 (114)
T 1o51_A 32 FEYLVKRAYELGMKGVTVYRGIMGFGHKR 60 (114)
T ss_dssp HHHHHHHHHHTTCSCCEEEECSCCCCC--
T ss_pred HHHHHHHHHHCCCCeEEEEcCcEEECCCC
Confidence 37889999999999999866666766654
No 41
>3kdv_A DDRB, DNA damage response B protein; anti-parallel beta-barrel, pentamer, DNA binding protein; HET: DNA; 2.80A {Deinococcus geothermalis} PDB: 4exw_A
Probab=37.68 E-value=33 Score=18.30 Aligned_cols=27 Identities=26% Similarity=0.282 Sum_probs=20.2
Q ss_pred HHHHHHHHHcCCCcccCCcccCCCCCCHH
Q psy1305 29 ADQIKKLGALGLMGVLVDEEYGGAGLDTL 57 (68)
Q Consensus 29 ~~~~~~l~~~G~~~~~~p~~~GG~g~~~~ 57 (68)
-++.+..+..||.+..+| +||.-+++.
T Consensus 31 l~v~R~yG~~Gwtsg~~p--~gGf~~pL~ 57 (184)
T 3kdv_A 31 LDVQRQYGRLGWTSGEVP--VGGYQFPLE 57 (184)
T ss_dssp HHHHHHHHTTTCBCSCCC--TTCCCCCGG
T ss_pred HHHHHHhhhcCCccCCCC--CCcEeeecc
Confidence 366777888999998887 578766543
No 42
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=35.16 E-value=30 Score=17.92 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=22.0
Q ss_pred hhhhCCCCHHHHHHHHHcCCCcccCCcccCCC
Q psy1305 21 LDKEHLFPADQIKKLGALGLMGVLVDEEYGGA 52 (68)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~ 52 (68)
..-+..+-+.+++.|.++|+.. ..+...||.
T Consensus 38 ~~is~~~l~kil~~L~~aGlv~-s~rG~~GGy 68 (162)
T 3k69_A 38 LHLNPVMIRNILSVLHKHGYLT-GTVGKNGGY 68 (162)
T ss_dssp HTSCGGGTHHHHHHHHHTTSSE-EECSTTCEE
T ss_pred HCcCHHHHHHHHHHHHHCCCEE-eecCCCCCe
Confidence 3334556689999999999974 455566665
No 43
>3ewt_E Tumor necrosis factor receptor superfamily member 6; calmodulin-peptide complex, FAS, death domain, calcium, calcium binding protein; 2.40A {Homo sapiens}
Probab=34.43 E-value=22 Score=12.81 Aligned_cols=10 Identities=10% Similarity=0.381 Sum_probs=5.5
Q ss_pred HHHHHHHHHh
Q psy1305 3 QKTCRDFAQQ 12 (68)
Q Consensus 3 ~~~~~~~~~~ 12 (68)
.+.+++|+++
T Consensus 13 ~~~Vk~fvR~ 22 (25)
T 3ewt_E 13 LSQVKGFVRK 22 (26)
T ss_pred HHHHHHHHHH
Confidence 3556666554
No 44
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=31.80 E-value=55 Score=16.62 Aligned_cols=36 Identities=14% Similarity=0.053 Sum_probs=26.6
Q ss_pred HHHHHHHHcCCCcccCCc-ccCCCCCCHHHHHHHHHH
Q psy1305 30 DQIKKLGALGLMGVLVDE-EYGGAGLDTLALHVAMEE 65 (68)
Q Consensus 30 ~~~~~l~~~G~~~~~~p~-~~GG~g~~~~~~~~~~e~ 65 (68)
.+.+.+.+.|+-++.+|. ..|=.|+++.....++++
T Consensus 99 ~~l~~a~~~~~~sIa~P~IgtG~~G~~~~~v~~ii~~ 135 (149)
T 2eee_A 99 AMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEE 135 (149)
T ss_dssp HHHHHHHHHTCCEEECCCCCCTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 455666678999999996 455568888877777665
No 45
>2l5q_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Bacteroides vulgatus}
Probab=31.79 E-value=58 Score=16.93 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=28.5
Q ss_pred HHHHHHHHhhhchhHHHhhhhCCCCH------HHHHHHHHcCCCcccCCcc
Q psy1305 4 KTCRDFAQQELKPIAAKLDKEHLFPA------DQIKKLGALGLMGVLVDEE 48 (68)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~G~~~~~~p~~ 48 (68)
+++++|+.+.+ | .+|++..++. .|+..|.+.|+....-|..
T Consensus 88 ~eL~~yf~eVL-P---~yD~dRVy~SDIKKliqWYNiL~~~g~~~f~~~~~ 134 (142)
T 2l5q_A 88 DELHAYFAEVL-P---NYDRDRVHNGDIKKLISWYNILVNNGITEFVEAPA 134 (142)
T ss_dssp HHHHHHHTTTC-T---TCCSSSTTSSHHHHHHHHHHHHHHHCCSCCSSSCS
T ss_pred HHHHHHHHHhC-C---CCcccccchHHHHHHHHHHHHHHHcCCccccchhh
Confidence 45677777644 2 3677777763 5889999999988765543
No 46
>3kp1_E D-ornithine aminomutase S component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_E* 3koy_E* 3koz_E* 3kp0_E* 3kox_E*
Probab=28.95 E-value=35 Score=17.24 Aligned_cols=17 Identities=29% Similarity=0.245 Sum_probs=13.5
Q ss_pred HHHHHHHHHcCCCcccC
Q psy1305 29 ADQIKKLGALGLMGVLV 45 (68)
Q Consensus 29 ~~~~~~l~~~G~~~~~~ 45 (68)
..+++.+.+.|+++-..
T Consensus 65 ~~iVd~~~e~gLLgkGA 81 (121)
T 3kp1_E 65 KAIVDKTMDRGLMGKGA 81 (121)
T ss_dssp HHHHHHHHHTTCGGGCH
T ss_pred HHHHHHHHHcccccccH
Confidence 46999999999987543
No 47
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=27.39 E-value=20 Score=20.16 Aligned_cols=12 Identities=17% Similarity=0.398 Sum_probs=9.3
Q ss_pred cccCCcccCCCC
Q psy1305 42 GVLVDEEYGGAG 53 (68)
Q Consensus 42 ~~~~p~~~GG~g 53 (68)
.-.+|++|||..
T Consensus 254 ~~~LP~~yGG~~ 265 (296)
T 1aua_A 254 AENLPVKFGGKS 265 (296)
T ss_dssp SSSSBGGGTSCB
T ss_pred HhhCcHHhCCCC
Confidence 457899999964
No 48
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=26.49 E-value=36 Score=16.63 Aligned_cols=24 Identities=29% Similarity=0.434 Sum_probs=17.8
Q ss_pred HHHHHHHHHcCCCcccCCcccCCCC
Q psy1305 29 ADQIKKLGALGLMGVLVDEEYGGAG 53 (68)
Q Consensus 29 ~~~~~~l~~~G~~~~~~p~~~GG~g 53 (68)
+++.+.|.+.|..++++-+- .|.|
T Consensus 19 ~~V~~aL~~~Gv~G~TV~~v-~G~G 42 (111)
T 3dfe_A 19 KKVAKIIEEAGATGYTVVDT-GGKG 42 (111)
T ss_dssp HHHHHHHHHHTCSCCEEEEE-BC--
T ss_pred HHHHHHHHHCCCCcEEEEec-Eeec
Confidence 57889999999999998653 4443
No 49
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*
Probab=25.98 E-value=22 Score=20.41 Aligned_cols=13 Identities=15% Similarity=0.411 Sum_probs=9.7
Q ss_pred cccCCcccCCCCC
Q psy1305 42 GVLVDEEYGGAGL 54 (68)
Q Consensus 42 ~~~~p~~~GG~g~ 54 (68)
.-.+|++|||..-
T Consensus 281 ~~~LP~eyGG~~~ 293 (316)
T 3hx3_A 281 ENILPSDFGGTLP 293 (316)
T ss_dssp GGGSBGGGTSSBC
T ss_pred HhhCcHhhCCCCC
Confidence 3478999999753
No 50
>2jyc_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, BC011709, protein structure initiative, PSI-2; NMR {Homo sapiens} PDB: 2lgr_A
Probab=25.66 E-value=78 Score=16.38 Aligned_cols=36 Identities=14% Similarity=0.053 Sum_probs=25.6
Q ss_pred HHHHHHHHcCCCcccCCc-ccCCCCCCHHHHHHHHHH
Q psy1305 30 DQIKKLGALGLMGVLVDE-EYGGAGLDTLALHVAMEE 65 (68)
Q Consensus 30 ~~~~~l~~~G~~~~~~p~-~~GG~g~~~~~~~~~~e~ 65 (68)
.+.+.+.+.|+-++.+|. ..|=.|+++.....++++
T Consensus 110 ~~l~~a~~~~~~sIa~P~IgtGi~G~p~~~v~~ii~~ 146 (160)
T 2jyc_A 110 AMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEE 146 (160)
T ss_dssp HHHHHHHHHTCCEEEEESCCSSCSSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 455556678999999995 445568888877776655
No 51
>1x8d_A Hypothetical protein YIIL; mutarotase, L-rhamnose, biosynthetic protein; HET: RNS; 1.80A {Escherichia coli} SCOP: d.58.4.21
Probab=25.42 E-value=33 Score=16.61 Aligned_cols=21 Identities=10% Similarity=-0.015 Sum_probs=18.1
Q ss_pred CCCCHHHHHHHHHcCCCcccC
Q psy1305 25 HLFPADQIKKLGALGLMGVLV 45 (68)
Q Consensus 25 ~~~~~~~~~~l~~~G~~~~~~ 45 (68)
....+++.+.++++|+..+.|
T Consensus 23 ~~vWPEv~~~L~~aGi~~ysI 43 (104)
T 1x8d_A 23 NPIWPELEAVLKSHGAHNYAI 43 (104)
T ss_dssp TTCCHHHHHHHHHTTEEEEEE
T ss_pred HhcCHHHHHHHHHcCCeEEEE
Confidence 467899999999999988766
No 52
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=23.03 E-value=27 Score=20.15 Aligned_cols=11 Identities=27% Similarity=0.383 Sum_probs=8.6
Q ss_pred cccCCcccCCC
Q psy1305 42 GVLVDEEYGGA 52 (68)
Q Consensus 42 ~~~~p~~~GG~ 52 (68)
.-.+|++|||.
T Consensus 269 ~~~LP~~yGG~ 279 (320)
T 3q8g_A 269 IENLPVKYGGT 279 (320)
T ss_dssp GGGSBGGGTSC
T ss_pred hhhCChhhCCC
Confidence 44789999986
No 53
>2dcl_A Hypothetical UPF0166 protein PH1503; hexamer, structural genomics, NPPSFA, national project on PR structural and functional analyses; HET: AMP; 2.28A {Pyrococcus horikoshii}
Probab=22.20 E-value=33 Score=17.29 Aligned_cols=29 Identities=24% Similarity=0.293 Sum_probs=21.1
Q ss_pred CHHHHHHHHHcCCCcccCCcccCCCCCCH
Q psy1305 28 PADQIKKLGALGLMGVLVDEEYGGAGLDT 56 (68)
Q Consensus 28 ~~~~~~~l~~~G~~~~~~p~~~GG~g~~~ 56 (68)
-+.+++.+.+.|+.+.++=....|.|-+-
T Consensus 28 ~~~Iv~~a~~~GiaGaTV~rgi~GfG~~g 56 (127)
T 2dcl_A 28 YKVIVEKLREMGIAGATVYRGIYGFGKKS 56 (127)
T ss_dssp HHHHHHHHHHTTCSCEEEEECSEEEC---
T ss_pred HHHHHHHHHHCCCCeEEEEcCcEEECCCC
Confidence 36789999999999998876666666544
No 54
>2qlw_A RHAU; mutarotase, isomerase; HET: MSE; 1.60A {Rhizobium leguminosarum BV} PDB: 2qlx_A*
Probab=21.87 E-value=48 Score=17.20 Aligned_cols=21 Identities=10% Similarity=0.015 Sum_probs=18.0
Q ss_pred CCCCHHHHHHHHHcCCCcccC
Q psy1305 25 HLFPADQIKKLGALGLMGVLV 45 (68)
Q Consensus 25 ~~~~~~~~~~l~~~G~~~~~~ 45 (68)
....+++.+.|.+.|+..+.|
T Consensus 63 a~VWPEv~~~Lk~aGI~nYSI 83 (144)
T 2qlw_A 63 DEIWPELVDLLHQSGASDYSI 83 (144)
T ss_dssp HTCCHHHHHHHHHHTCEEEEE
T ss_pred HhCCHHHHHHHHHcCCeEEEE
Confidence 367899999999999988766
No 55
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=20.95 E-value=96 Score=18.69 Aligned_cols=35 Identities=6% Similarity=-0.009 Sum_probs=27.7
Q ss_pred hhhhCCCCHHHHHHHHHcCCCcccCCcccCCCCCC
Q psy1305 21 LDKEHLFPADQIKKLGALGLMGVLVDEEYGGAGLD 55 (68)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~G~~~~~~p~~~GG~g~~ 55 (68)
+-..+....++++.|-+.-+|...-|+..|=--++
T Consensus 215 ~A~~G~v~~~lL~~ll~~pyf~~~pPKStGRE~F~ 249 (370)
T 3cqy_A 215 WAASGKTDPQLLAQLLSHPYFSLAYPKSTGRELFN 249 (370)
T ss_dssp HHHHSCCCHHHHHHHHTCGGGGSCSSCCCCSSSSS
T ss_pred hhcCCCccHHHHHHHhcCccccCCCCCccChhhcC
Confidence 33457788999999999999999999987654443
No 56
>1esw_A Amylomaltase; (beta,alpha)8-barrel, glucanotransferase, alpha-amylase FAMI acarbose, transferase; HET: ACR; 1.90A {Thermus aquaticus} SCOP: c.1.8.1 PDB: 1cwy_A* 1fp8_A 1fp9_A 2owc_A* 2oww_A* 2owx_A* 2x1i_A*
Probab=20.76 E-value=61 Score=20.27 Aligned_cols=23 Identities=17% Similarity=0.118 Sum_probs=19.9
Q ss_pred hCCCCHHHHHHHHHcCCCcccCC
Q psy1305 24 EHLFPADQIKKLGALGLMGVLVD 46 (68)
Q Consensus 24 ~~~~~~~~~~~l~~~G~~~~~~p 46 (68)
-|.+|+++.+.+.+.|+.++.|-
T Consensus 342 LG~v~~~V~~ll~~~gi~gmkVl 364 (500)
T 1esw_A 342 LGVITPEVEALRDRFGLPGMKVL 364 (500)
T ss_dssp TTCCCHHHHHHHHHTTCCEEEEG
T ss_pred CCCCCHHHHHHHHHcCCCCceEE
Confidence 36789999999999999998764
No 57
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=20.72 E-value=38 Score=16.99 Aligned_cols=24 Identities=17% Similarity=0.090 Sum_probs=16.7
Q ss_pred CCHHHHHHHHHcCCCcccCCcccCCC
Q psy1305 27 FPADQIKKLGALGLMGVLVDEEYGGA 52 (68)
Q Consensus 27 ~~~~~~~~l~~~G~~~~~~p~~~GG~ 52 (68)
+-..++..|.++|+.... .. .||.
T Consensus 39 ~l~kIl~~L~~aGlv~s~-rG-~GGy 62 (145)
T 1xd7_A 39 VVRRMISLLKKADILTSR-AG-VPGA 62 (145)
T ss_dssp HHHHHHHHHHHTTSEECC-SS-SSSC
T ss_pred HHHHHHHHHHHCCceEee-cC-CCCc
Confidence 336788999999998643 23 5664
No 58
>1tz7_A 4-alpha-glucanotransferase; (beta, alpha)8- barrel; 2.15A {Aquifex aeolicus} SCOP: c.1.8.1
Probab=20.35 E-value=65 Score=20.23 Aligned_cols=22 Identities=9% Similarity=-0.029 Sum_probs=19.5
Q ss_pred CCCCHHHHHHHHHcCCCcccCC
Q psy1305 25 HLFPADQIKKLGALGLMGVLVD 46 (68)
Q Consensus 25 ~~~~~~~~~~l~~~G~~~~~~p 46 (68)
|.+|+++.+.+.+.|+.++.|-
T Consensus 356 G~v~~~V~~ll~~~gi~GmkVl 377 (505)
T 1tz7_A 356 GFITDEVRYLRETFKIPGSRVI 377 (505)
T ss_dssp SSCCHHHHHHHHHTTCCEEEEG
T ss_pred CCCCHHHHHHHHHcCCCCceEE
Confidence 6789999999999999998764
Done!