Query psy13054
Match_columns 1128
No_of_seqs 760 out of 4392
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 18:18:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13054.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13054hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kb6_A D-lactate dehydrogenase 100.0 2.1E-60 7.1E-65 542.3 24.9 270 850-1125 39-324 (334)
2 4g2n_A D-isomer specific 2-hyd 100.0 7.5E-59 2.6E-63 530.3 33.0 281 844-1128 62-344 (345)
3 2pi1_A D-lactate dehydrogenase 100.0 1.1E-58 3.7E-63 528.1 24.1 282 841-1128 30-327 (334)
4 4e5n_A Thermostable phosphite 100.0 1E-57 3.6E-62 519.4 29.7 279 844-1128 36-325 (330)
5 3hg7_A D-isomer specific 2-hyd 100.0 9.5E-58 3.2E-62 517.1 28.6 294 814-1128 16-310 (324)
6 3jtm_A Formate dehydrogenase, 100.0 3.7E-57 1.2E-61 517.8 31.8 288 832-1123 40-333 (351)
7 3gg9_A D-3-phosphoglycerate de 100.0 5.6E-57 1.9E-61 516.9 31.4 296 830-1128 24-332 (352)
8 4hy3_A Phosphoglycerate oxidor 100.0 5.9E-57 2E-61 517.4 29.7 265 860-1128 82-347 (365)
9 2yq5_A D-isomer specific 2-hyd 100.0 6.2E-57 2.1E-61 514.1 26.8 280 843-1128 35-331 (343)
10 3k5p_A D-3-phosphoglycerate de 100.0 1.2E-56 4E-61 521.0 29.4 277 843-1128 48-330 (416)
11 3evt_A Phosphoglycerate dehydr 100.0 4.4E-57 1.5E-61 512.3 24.0 258 863-1128 50-310 (324)
12 4dgs_A Dehydrogenase; structur 100.0 4.1E-56 1.4E-60 506.8 28.9 275 845-1128 63-339 (340)
13 1sc6_A PGDH, D-3-phosphoglycer 100.0 1.1E-55 3.7E-60 514.8 30.1 277 843-1128 37-319 (404)
14 3kb6_A D-lactate dehydrogenase 100.0 2.5E-56 8.6E-61 508.6 21.2 265 77-435 39-324 (334)
15 2nac_A NAD-dependent formate d 100.0 8.7E-55 3E-59 503.9 33.3 280 845-1128 81-365 (393)
16 1j4a_A D-LDH, D-lactate dehydr 100.0 6.3E-55 2.2E-59 497.7 29.8 276 845-1128 38-330 (333)
17 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 7.2E-55 2.4E-59 496.6 30.0 277 843-1126 57-334 (335)
18 3pp8_A Glyoxylate/hydroxypyruv 100.0 3.6E-55 1.2E-59 495.1 26.1 288 814-1128 16-309 (315)
19 4g2n_A D-isomer specific 2-hyd 100.0 1.1E-54 3.8E-59 495.9 28.7 304 19-432 28-338 (345)
20 1xdw_A NAD+-dependent (R)-2-hy 100.0 1.7E-54 5.6E-59 493.9 27.9 277 845-1128 37-330 (331)
21 2j6i_A Formate dehydrogenase; 100.0 2.9E-54 9.8E-59 497.3 29.3 275 844-1122 51-338 (364)
22 1dxy_A D-2-hydroxyisocaproate 100.0 7.9E-55 2.7E-59 496.8 24.1 276 846-1128 37-328 (333)
23 1wwk_A Phosphoglycerate dehydr 100.0 9.2E-54 3.2E-58 483.0 29.4 271 845-1121 36-307 (307)
24 2ekl_A D-3-phosphoglycerate de 100.0 2.1E-53 7E-58 481.4 29.5 273 844-1125 37-313 (313)
25 2cuk_A Glycerate dehydrogenase 100.0 6.1E-53 2.1E-57 477.0 33.0 276 844-1128 34-310 (311)
26 1gdh_A D-glycerate dehydrogena 100.0 1.2E-52 4E-57 476.6 32.2 277 845-1126 36-316 (320)
27 1mx3_A CTBP1, C-terminal bindi 100.0 4.2E-52 1.4E-56 475.9 32.2 273 852-1125 62-339 (347)
28 3k5p_A D-3-phosphoglycerate de 100.0 6.9E-52 2.4E-56 481.0 32.2 289 43-432 24-324 (416)
29 4e5n_A Thermostable phosphite 100.0 2.1E-52 7.2E-57 475.9 26.6 296 42-433 10-320 (330)
30 1qp8_A Formate dehydrogenase; 100.0 4.6E-52 1.6E-56 468.0 26.4 253 864-1128 40-295 (303)
31 3ba1_A HPPR, hydroxyphenylpyru 100.0 1.7E-51 5.8E-56 468.7 29.5 272 847-1128 59-332 (333)
32 1sc6_A PGDH, D-3-phosphoglycer 100.0 7.1E-51 2.4E-55 474.2 31.1 289 43-432 13-313 (404)
33 2pi1_A D-lactate dehydrogenase 100.0 3.3E-52 1.1E-56 474.7 19.3 285 55-437 21-326 (334)
34 3jtm_A Formate dehydrogenase, 100.0 5.5E-51 1.9E-55 466.8 27.7 283 55-432 39-332 (351)
35 2d0i_A Dehydrogenase; structur 100.0 1.5E-50 5.2E-55 461.6 29.4 282 844-1128 33-317 (333)
36 2gcg_A Glyoxylate reductase/hy 100.0 2.9E-50 9.8E-55 459.1 30.7 282 845-1128 45-328 (330)
37 2w2k_A D-mandelate dehydrogena 100.0 1.8E-50 6.1E-55 463.6 29.1 264 862-1128 67-337 (348)
38 4dgs_A Dehydrogenase; structur 100.0 2.4E-51 8.3E-56 467.5 20.1 289 42-432 38-333 (340)
39 2yq5_A D-isomer specific 2-hyd 100.0 1.8E-51 6E-56 469.2 18.7 280 56-433 25-326 (343)
40 3gg9_A D-3-phosphoglycerate de 100.0 1.3E-50 4.4E-55 464.2 25.9 290 56-433 26-328 (352)
41 2dbq_A Glyoxylate reductase; D 100.0 3.5E-50 1.2E-54 459.1 28.6 282 845-1128 37-321 (334)
42 3gvx_A Glycerate dehydrogenase 100.0 7.1E-51 2.4E-55 454.5 22.2 238 871-1124 46-285 (290)
43 4hy3_A Phosphoglycerate oxidor 100.0 1.3E-50 4.6E-55 464.8 20.5 290 43-433 44-342 (365)
44 3hg7_A D-isomer specific 2-hyd 100.0 1.2E-50 4E-55 459.1 18.3 265 70-434 37-306 (324)
45 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 3.5E-49 1.2E-53 449.8 27.8 290 43-433 35-331 (335)
46 3oet_A Erythronate-4-phosphate 100.0 5.4E-49 1.8E-53 452.1 24.8 244 850-1123 37-285 (381)
47 3evt_A Phosphoglycerate dehydr 100.0 9.7E-50 3.3E-54 452.2 18.4 285 42-432 9-303 (324)
48 1ygy_A PGDH, D-3-phosphoglycer 100.0 8E-48 2.7E-52 464.4 34.5 279 843-1128 34-313 (529)
49 1wwk_A Phosphoglycerate dehydr 100.0 3.7E-48 1.3E-52 437.3 26.0 287 44-430 13-306 (307)
50 1xdw_A NAD+-dependent (R)-2-hy 100.0 2.2E-48 7.6E-53 443.4 24.2 289 46-432 14-324 (331)
51 2j6i_A Formate dehydrogenase; 100.0 2E-48 7E-53 448.6 24.0 282 56-431 38-337 (364)
52 1dxy_A D-2-hydroxyisocaproate 100.0 1.1E-48 3.6E-53 446.3 20.7 278 56-432 24-322 (333)
53 1gdh_A D-glycerate dehydrogena 100.0 1.8E-47 6.2E-52 434.0 29.8 293 43-432 10-312 (320)
54 1j4a_A D-LDH, D-lactate dehydr 100.0 2.5E-48 8.7E-53 443.3 22.6 277 56-432 26-324 (333)
55 2nac_A NAD-dependent formate d 100.0 1.1E-47 3.7E-52 444.6 27.2 284 56-434 67-361 (393)
56 2o4c_A Erythronate-4-phosphate 100.0 1.1E-47 3.9E-52 442.3 24.0 234 862-1125 47-284 (380)
57 2ekl_A D-3-phosphoglycerate de 100.0 5.9E-47 2E-51 428.5 27.8 286 44-432 15-310 (313)
58 2cuk_A Glycerate dehydrogenase 100.0 8.1E-47 2.8E-51 426.9 27.7 288 44-431 10-303 (311)
59 3ba1_A HPPR, hydroxyphenylpyru 100.0 7.9E-46 2.7E-50 422.1 25.5 287 43-432 32-326 (333)
60 3pp8_A Glyoxylate/hydroxypyruv 100.0 3.2E-46 1.1E-50 422.0 21.0 254 78-433 39-304 (315)
61 3oet_A Erythronate-4-phosphate 100.0 4.2E-46 1.4E-50 428.1 20.5 262 55-440 21-292 (381)
62 1mx3_A CTBP1, C-terminal bindi 100.0 2.1E-45 7.2E-50 420.5 25.8 286 55-432 41-336 (347)
63 2d0i_A Dehydrogenase; structur 100.0 9.8E-45 3.4E-49 413.7 24.9 288 43-431 11-310 (333)
64 2gcg_A Glyoxylate reductase/hy 100.0 3.1E-44 1.1E-48 409.4 28.6 298 43-432 17-322 (330)
65 2dbq_A Glyoxylate reductase; D 100.0 1.2E-44 4E-49 413.5 24.7 298 43-432 11-315 (334)
66 2w2k_A D-mandelate dehydrogena 100.0 2E-44 6.7E-49 413.6 25.5 291 46-432 18-331 (348)
67 1ygy_A PGDH, D-3-phosphoglycer 100.0 3.7E-43 1.3E-47 423.7 30.0 288 43-432 13-307 (529)
68 1qp8_A Formate dehydrogenase; 100.0 1.7E-43 5.8E-48 398.3 16.4 254 76-432 27-289 (303)
69 2o4c_A Erythronate-4-phosphate 100.0 5.3E-43 1.8E-47 403.5 19.9 249 76-442 33-291 (380)
70 3gvx_A Glycerate dehydrogenase 100.0 5.6E-43 1.9E-47 390.9 17.4 246 76-432 30-283 (290)
71 1v8b_A Adenosylhomocysteinase; 100.0 2.2E-33 7.4E-38 330.9 4.5 228 874-1128 192-430 (479)
72 3d64_A Adenosylhomocysteinase; 100.0 1.2E-33 4E-38 334.4 0.6 227 874-1128 212-445 (494)
73 3d64_A Adenosylhomocysteinase; 99.9 1.5E-25 5.1E-30 265.3 2.9 214 102-432 212-439 (494)
74 1v8b_A Adenosylhomocysteinase; 99.9 2.7E-25 9.1E-30 262.2 4.7 198 102-415 192-397 (479)
75 3d4o_A Dipicolinate synthase s 99.9 1.3E-22 4.4E-27 227.4 13.7 153 863-1050 85-248 (293)
76 3ce6_A Adenosylhomocysteinase; 99.9 2.9E-23 1E-27 246.5 3.1 226 875-1128 210-445 (494)
77 2vhw_A Alanine dehydrogenase; 99.8 2.9E-20 9.9E-25 215.5 17.6 218 849-1102 63-307 (377)
78 2rir_A Dipicolinate synthase, 99.8 2.2E-20 7.4E-25 210.0 11.3 158 864-1050 88-250 (300)
79 3d4o_A Dipicolinate synthase s 99.8 2.1E-19 7.2E-24 201.3 11.3 158 511-735 2-189 (293)
80 1gtm_A Glutamate dehydrogenase 99.7 2E-19 6.8E-24 210.0 0.1 152 954-1119 210-385 (419)
81 2rir_A Dipicolinate synthase, 99.7 2.6E-17 8.9E-22 184.9 9.7 164 511-735 4-191 (300)
82 2eez_A Alanine dehydrogenase; 99.7 3.9E-17 1.3E-21 188.8 10.6 243 853-1126 65-338 (369)
83 3h9u_A Adenosylhomocysteinase; 99.6 1.1E-15 3.9E-20 177.5 12.7 155 882-1059 155-312 (436)
84 3n58_A Adenosylhomocysteinase; 99.6 2.6E-15 8.9E-20 174.0 11.8 153 883-1058 192-347 (464)
85 2vhw_A Alanine dehydrogenase; 99.6 9.2E-15 3.1E-19 169.4 15.9 250 42-418 17-307 (377)
86 3ce6_A Adenosylhomocysteinase; 99.6 7.3E-16 2.5E-20 183.2 4.4 198 106-417 214-421 (494)
87 1x13_A NAD(P) transhydrogenase 99.5 8.6E-15 2.9E-19 170.9 9.0 181 864-1053 82-301 (401)
88 1gpj_A Glutamyl-tRNA reductase 99.5 4E-16 1.4E-20 182.4 -2.5 215 874-1122 80-325 (404)
89 1l7d_A Nicotinamide nucleotide 99.5 5E-14 1.7E-18 163.6 13.6 199 849-1051 63-301 (384)
90 3gvp_A Adenosylhomocysteinase 99.5 8.8E-14 3E-18 161.3 11.2 143 892-1057 175-319 (435)
91 1x13_A NAD(P) transhydrogenase 99.3 6.5E-12 2.2E-16 146.6 12.2 250 42-363 24-301 (401)
92 1gtm_A Glutamate dehydrogenase 99.3 1.7E-13 6E-18 160.0 -3.1 121 269-412 217-341 (419)
93 2eez_A Alanine dehydrogenase; 99.2 3.5E-11 1.2E-15 138.9 13.3 261 42-416 17-310 (369)
94 3h9u_A Adenosylhomocysteinase; 99.2 1.3E-11 4.6E-16 143.5 9.4 61 305-369 251-312 (436)
95 3n58_A Adenosylhomocysteinase; 99.2 3.2E-11 1.1E-15 140.1 8.4 59 306-368 288-347 (464)
96 1l7d_A Nicotinamide nucleotide 99.2 1.7E-10 5.8E-15 133.9 14.3 248 42-362 17-302 (384)
97 1c1d_A L-phenylalanine dehydro 99.1 2.7E-10 9.1E-15 130.2 10.2 109 953-1068 172-282 (355)
98 2g5c_A Prephenate dehydrogenas 99.0 1.8E-09 6.1E-14 119.4 12.6 145 957-1106 2-156 (281)
99 4dll_A 2-hydroxy-3-oxopropiona 99.0 6.6E-10 2.3E-14 125.7 8.4 116 953-1068 28-146 (320)
100 3obb_A Probable 3-hydroxyisobu 98.9 6.2E-10 2.1E-14 125.0 7.0 114 957-1072 4-121 (300)
101 4gbj_A 6-phosphogluconate dehy 98.9 9.9E-10 3.4E-14 123.2 8.5 112 957-1068 6-119 (297)
102 3ggo_A Prephenate dehydrogenas 98.9 4.9E-09 1.7E-13 118.5 13.5 151 953-1108 30-190 (314)
103 3l6d_A Putative oxidoreductase 98.9 9E-10 3.1E-14 123.9 7.2 115 953-1067 6-122 (306)
104 3gvp_A Adenosylhomocysteinase 98.9 1.3E-09 4.4E-14 126.6 8.2 58 306-367 261-319 (435)
105 3qha_A Putative oxidoreductase 98.9 2.3E-09 7.8E-14 119.9 8.5 111 956-1068 15-127 (296)
106 4dio_A NAD(P) transhydrogenase 98.9 3.1E-08 1E-12 114.9 17.5 100 953-1053 187-321 (405)
107 3doj_A AT3G25530, dehydrogenas 98.9 2.7E-09 9.3E-14 120.1 8.4 115 953-1067 18-136 (310)
108 3p2y_A Alanine dehydrogenase/p 98.8 5E-09 1.7E-13 120.5 10.0 175 864-1051 94-309 (381)
109 3pef_A 6-phosphogluconate dehy 98.8 3.3E-09 1.1E-13 117.9 7.9 111 957-1067 2-116 (287)
110 4e21_A 6-phosphogluconate dehy 98.8 5E-09 1.7E-13 120.4 9.7 120 954-1075 20-144 (358)
111 2h78_A Hibadh, 3-hydroxyisobut 98.8 1.9E-09 6.4E-14 120.6 5.6 110 957-1066 4-117 (302)
112 4ezb_A Uncharacterized conserv 98.8 8.2E-09 2.8E-13 116.7 10.6 118 956-1076 24-151 (317)
113 3pdu_A 3-hydroxyisobutyrate de 98.8 3.1E-09 1.1E-13 118.0 6.7 111 957-1067 2-116 (287)
114 3ond_A Adenosylhomocysteinase; 98.8 8.9E-09 3.1E-13 121.6 10.7 93 953-1049 262-355 (488)
115 4e12_A Diketoreductase; oxidor 98.8 1.7E-08 5.9E-13 112.1 12.4 139 957-1107 5-170 (283)
116 2d5c_A AROE, shikimate 5-dehyd 98.8 1.5E-08 5.1E-13 111.3 11.1 160 861-1065 60-223 (263)
117 3qsg_A NAD-binding phosphogluc 98.8 1.2E-08 4E-13 115.1 10.4 128 931-1063 2-134 (312)
118 3g0o_A 3-hydroxyisobutyrate de 98.8 4.6E-09 1.6E-13 117.8 6.2 112 956-1067 7-123 (303)
119 1np3_A Ketol-acid reductoisome 98.7 1.5E-09 5.2E-14 123.8 1.5 136 952-1097 12-155 (338)
120 3b1f_A Putative prephenate deh 98.7 1.5E-08 5E-13 112.6 9.3 140 956-1099 6-158 (290)
121 2pv7_A T-protein [includes: ch 98.7 3E-08 1E-12 111.0 8.2 137 929-1096 4-142 (298)
122 3ktd_A Prephenate dehydrogenas 98.6 2.1E-08 7.3E-13 114.4 5.7 138 956-1098 8-155 (341)
123 4gwg_A 6-phosphogluconate dehy 98.6 9.7E-08 3.3E-12 113.6 10.5 119 956-1075 4-132 (484)
124 1leh_A Leucine dehydrogenase; 98.6 6.5E-08 2.2E-12 111.2 8.5 106 953-1065 170-278 (364)
125 1yb4_A Tartronic semialdehyde 98.6 5.3E-08 1.8E-12 108.0 7.0 106 957-1063 4-113 (295)
126 2cvz_A Dehydrogenase, 3-hydrox 98.6 6.8E-08 2.3E-12 106.7 7.7 106 957-1064 2-108 (289)
127 1vpd_A Tartronate semialdehyde 98.5 6.4E-08 2.2E-12 107.6 7.1 109 957-1065 6-118 (299)
128 2hk9_A Shikimate dehydrogenase 98.5 1.2E-07 4E-12 105.1 9.2 157 861-1062 72-233 (275)
129 2f1k_A Prephenate dehydrogenas 98.5 2.6E-07 8.9E-12 101.8 11.8 143 957-1106 1-150 (279)
130 3fr7_A Putative ketol-acid red 98.5 4.1E-08 1.4E-12 115.0 5.4 95 952-1049 49-157 (525)
131 2zyd_A 6-phosphogluconate dehy 98.5 1.1E-07 3.7E-12 113.5 9.1 113 954-1067 13-134 (480)
132 3cky_A 2-hydroxymethyl glutara 98.5 7.3E-08 2.5E-12 107.3 7.0 107 957-1063 5-115 (301)
133 2gf2_A Hibadh, 3-hydroxyisobut 98.5 6.6E-08 2.3E-12 107.4 6.5 106 957-1062 1-110 (296)
134 2yjz_A Metalloreductase steap4 97.9 1.4E-08 4.8E-13 107.4 0.0 94 954-1051 17-110 (201)
135 2uyy_A N-PAC protein; long-cha 98.5 1.4E-07 4.9E-12 105.9 7.9 109 957-1065 31-143 (316)
136 1gpj_A Glutamyl-tRNA reductase 98.5 9.4E-09 3.2E-13 120.1 -2.8 150 618-769 79-249 (404)
137 2p4q_A 6-phosphogluconate dehy 98.4 3.4E-07 1.2E-11 109.6 9.8 111 956-1067 10-130 (497)
138 3dtt_A NADP oxidoreductase; st 98.4 1.3E-07 4.5E-12 102.8 4.8 95 950-1047 13-125 (245)
139 1i36_A Conserved hypothetical 98.4 2.6E-07 8.8E-12 101.0 6.1 101 958-1063 2-105 (264)
140 2q3e_A UDP-glucose 6-dehydroge 98.4 4.7E-07 1.6E-11 107.6 8.6 134 957-1092 6-181 (467)
141 2iz1_A 6-phosphogluconate dehy 98.4 4.7E-07 1.6E-11 107.9 8.4 115 957-1072 6-129 (474)
142 2pgd_A 6-phosphogluconate dehy 98.3 5.6E-07 1.9E-11 107.4 8.6 116 957-1073 3-128 (482)
143 1zej_A HBD-9, 3-hydroxyacyl-CO 98.3 6.2E-07 2.1E-11 100.2 8.4 136 954-1106 10-155 (293)
144 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.3 6.9E-07 2.4E-11 106.5 7.5 116 957-1073 2-130 (478)
145 3oj0_A Glutr, glutamyl-tRNA re 98.3 9.7E-07 3.3E-11 87.7 7.3 91 955-1051 20-115 (144)
146 2vns_A Metalloreductase steap3 98.3 6.3E-07 2.2E-11 95.5 6.0 94 955-1052 27-121 (215)
147 1pjc_A Protein (L-alanine dehy 98.3 3.7E-06 1.3E-10 96.6 12.7 162 874-1047 86-268 (361)
148 3c24_A Putative oxidoreductase 98.2 1.1E-06 3.6E-11 97.5 5.8 92 957-1050 12-105 (286)
149 3k6j_A Protein F01G10.3, confi 98.2 5.1E-06 1.7E-10 98.1 11.8 180 905-1108 12-216 (460)
150 3d1l_A Putative NADP oxidoredu 98.2 9.3E-07 3.2E-11 96.7 5.1 98 954-1053 8-109 (266)
151 2dpo_A L-gulonate 3-dehydrogen 98.2 3.7E-06 1.3E-10 95.1 9.9 129 956-1095 6-161 (319)
152 2raf_A Putative dinucleotide-b 98.1 2.4E-06 8.1E-11 90.7 6.4 79 953-1050 16-94 (209)
153 2ahr_A Putative pyrroline carb 98.1 8.4E-06 2.9E-10 88.7 9.6 99 957-1063 4-105 (259)
154 1jay_A Coenzyme F420H2:NADP+ o 98.0 2.6E-06 8.9E-11 89.8 4.7 114 958-1078 2-137 (212)
155 3gt0_A Pyrroline-5-carboxylate 98.0 4.3E-06 1.5E-10 90.7 6.5 102 957-1062 3-111 (247)
156 1mv8_A GMD, GDP-mannose 6-dehy 98.0 7.6E-06 2.6E-10 96.4 9.1 136 958-1093 2-177 (436)
157 1c1d_A L-phenylalanine dehydro 98.0 4.6E-06 1.6E-10 95.4 6.5 64 305-375 215-279 (355)
158 2izz_A Pyrroline-5-carboxylate 98.0 1.2E-05 4.2E-10 90.7 9.6 105 954-1062 20-132 (322)
159 2i99_A MU-crystallin homolog; 97.9 9.1E-06 3.1E-10 91.5 7.4 90 955-1050 134-230 (312)
160 3pid_A UDP-glucose 6-dehydroge 97.9 2.1E-05 7.2E-10 92.2 10.4 132 953-1092 33-196 (432)
161 1f0y_A HCDH, L-3-hydroxyacyl-C 97.9 3.4E-05 1.1E-09 86.2 11.3 115 957-1074 16-161 (302)
162 1yqg_A Pyrroline-5-carboxylate 97.9 1E-05 3.4E-10 88.2 5.7 98 958-1063 2-103 (263)
163 2rcy_A Pyrroline carboxylate r 97.8 6.4E-05 2.2E-09 81.7 11.6 98 956-1063 4-106 (262)
164 3tri_A Pyrroline-5-carboxylate 97.8 1.8E-05 6.2E-10 87.7 7.2 109 956-1068 3-119 (280)
165 4a7p_A UDP-glucose dehydrogena 97.8 4E-05 1.4E-09 90.4 10.3 105 957-1062 9-145 (446)
166 3mog_A Probable 3-hydroxybutyr 97.8 4E-05 1.4E-09 91.3 9.1 117 956-1077 5-148 (483)
167 3gg2_A Sugar dehydrogenase, UD 97.7 4.1E-05 1.4E-09 90.5 8.7 105 957-1062 3-138 (450)
168 3phh_A Shikimate dehydrogenase 97.7 4.8E-05 1.6E-09 83.9 8.3 105 956-1063 118-224 (269)
169 3ngx_A Bifunctional protein fo 97.7 6.9E-05 2.4E-09 82.4 9.1 119 954-1113 148-267 (276)
170 1bg6_A N-(1-D-carboxylethyl)-L 97.7 5.4E-05 1.8E-09 85.9 8.6 103 957-1062 5-124 (359)
171 3p2o_A Bifunctional protein fo 97.7 8E-05 2.7E-09 82.3 9.3 117 953-1109 157-274 (285)
172 3l07_A Bifunctional protein fo 97.7 8.6E-05 2.9E-09 82.0 9.3 119 953-1112 158-277 (285)
173 2o3j_A UDP-glucose 6-dehydroge 97.7 9E-05 3.1E-09 88.4 10.1 134 957-1092 10-187 (481)
174 1b0a_A Protein (fold bifunctio 97.7 7.3E-05 2.5E-09 82.6 8.5 127 953-1119 156-283 (288)
175 3ojo_A CAP5O; rossmann fold, c 97.7 7.9E-05 2.7E-09 87.5 9.3 107 954-1060 9-143 (431)
176 4a26_A Putative C-1-tetrahydro 97.7 7.4E-05 2.5E-09 83.1 8.6 131 953-1118 162-296 (300)
177 4a5o_A Bifunctional protein fo 97.6 0.00011 3.9E-09 81.1 9.7 79 953-1050 158-237 (286)
178 3dfu_A Uncharacterized protein 97.6 7.2E-05 2.5E-09 80.7 7.9 103 957-1094 7-109 (232)
179 2c2x_A Methylenetetrahydrofola 97.6 0.00011 3.7E-09 81.0 9.4 111 953-1105 155-268 (281)
180 4huj_A Uncharacterized protein 97.6 5.3E-05 1.8E-09 80.8 6.3 106 956-1065 23-144 (220)
181 3don_A Shikimate dehydrogenase 97.6 9.6E-05 3.3E-09 81.9 8.5 105 954-1063 115-225 (277)
182 3u62_A Shikimate dehydrogenase 97.6 0.00011 3.7E-09 80.5 8.7 102 954-1063 107-214 (253)
183 1a4i_A Methylenetetrahydrofola 97.6 0.00015 5.2E-09 80.5 9.8 133 953-1120 162-296 (301)
184 1y81_A Conserved hypothetical 97.6 7E-05 2.4E-09 74.4 6.3 103 954-1067 12-119 (138)
185 2egg_A AROE, shikimate 5-dehyd 97.6 0.00015 5.1E-09 81.1 9.6 107 954-1065 139-257 (297)
186 2ew2_A 2-dehydropantoate 2-red 97.5 7E-05 2.4E-09 83.1 6.4 107 957-1066 4-127 (316)
187 1txg_A Glycerol-3-phosphate de 97.5 7.6E-05 2.6E-09 84.0 6.7 102 958-1062 2-124 (335)
188 1edz_A 5,10-methylenetetrahydr 97.5 8.4E-05 2.9E-09 83.7 6.9 90 953-1049 174-278 (320)
189 1dlj_A UDP-glucose dehydrogena 97.5 0.00011 3.6E-09 85.7 8.0 103 958-1063 2-134 (402)
190 3k96_A Glycerol-3-phosphate de 97.5 0.00017 6E-09 82.6 9.3 105 955-1061 28-152 (356)
191 2y0c_A BCEC, UDP-glucose dehyd 97.5 0.00011 3.9E-09 87.4 7.9 106 956-1062 8-144 (478)
192 3g79_A NDP-N-acetyl-D-galactos 97.5 0.00014 4.7E-09 86.5 8.4 103 957-1059 19-160 (478)
193 1zcj_A Peroxisomal bifunctiona 97.5 0.0003 1E-08 83.4 10.7 115 956-1074 37-175 (463)
194 2duw_A Putative COA-binding pr 97.4 7.9E-05 2.7E-09 74.6 4.6 104 956-1068 13-121 (145)
195 1z82_A Glycerol-3-phosphate de 97.4 0.00011 3.6E-09 83.4 6.0 87 956-1049 14-114 (335)
196 1ks9_A KPA reductase;, 2-dehyd 97.4 0.00018 6E-09 79.0 7.6 90 958-1049 2-100 (291)
197 1wdk_A Fatty oxidation complex 97.4 0.00021 7.1E-09 89.2 9.0 114 957-1074 315-454 (715)
198 3c85_A Putative glutathione-re 97.4 7.8E-05 2.7E-09 76.7 4.3 93 953-1047 36-140 (183)
199 3ulk_A Ketol-acid reductoisome 97.4 0.00026 8.8E-09 81.9 8.6 95 952-1049 33-134 (491)
200 1x0v_A GPD-C, GPDH-C, glycerol 97.4 0.00015 5E-09 82.5 6.6 93 956-1050 8-128 (354)
201 2dc1_A L-aspartate dehydrogena 97.3 0.00021 7.2E-09 76.9 6.8 96 958-1064 2-102 (236)
202 1yj8_A Glycerol-3-phosphate de 97.3 0.00012 4.3E-09 84.1 5.2 91 957-1049 22-144 (375)
203 3ond_A Adenosylhomocysteinase; 97.3 0.00024 8.2E-09 84.1 7.3 48 307-358 307-354 (488)
204 1evy_A Glycerol-3-phosphate de 97.3 5.2E-05 1.8E-09 86.9 1.3 93 958-1051 17-129 (366)
205 3p2y_A Alanine dehydrogenase/p 97.3 0.00011 3.7E-09 84.7 3.5 50 313-363 258-311 (381)
206 2wtb_A MFP2, fatty acid multif 97.2 0.00059 2E-08 85.3 9.8 114 957-1074 313-452 (725)
207 2g1u_A Hypothetical protein TM 97.2 0.00051 1.7E-08 68.8 7.2 95 953-1049 16-121 (155)
208 4dio_A NAD(P) transhydrogenase 97.2 0.00016 5.5E-09 83.9 3.6 51 313-364 268-322 (405)
209 2d5c_A AROE, shikimate 5-dehyd 97.1 0.00021 7.1E-09 78.2 3.6 77 619-733 72-148 (263)
210 3hdj_A Probable ornithine cycl 97.1 0.0016 5.4E-08 73.4 10.4 88 955-1049 120-216 (313)
211 3o8q_A Shikimate 5-dehydrogena 97.0 0.0006 2.1E-08 75.7 6.2 106 954-1063 124-237 (281)
212 3fwz_A Inner membrane protein 97.0 0.00042 1.4E-08 68.3 4.4 89 956-1046 7-105 (140)
213 3ghy_A Ketopantoate reductase 97.0 0.00043 1.5E-08 78.4 5.1 108 956-1067 3-143 (335)
214 3l6d_A Putative oxidoreductase 97.0 0.00027 9.3E-09 79.1 3.3 69 308-376 52-121 (306)
215 1p77_A Shikimate 5-dehydrogena 97.0 0.00066 2.2E-08 74.8 6.3 69 954-1022 117-192 (272)
216 2i76_A Hypothetical protein; N 97.0 0.00013 4.5E-09 80.4 0.6 86 957-1049 3-92 (276)
217 2qyt_A 2-dehydropantoate 2-red 97.0 0.00032 1.1E-08 78.1 3.5 103 957-1064 9-134 (317)
218 1x7d_A Ornithine cyclodeaminas 96.9 0.0013 4.6E-08 75.1 8.5 90 955-1048 128-228 (350)
219 1nyt_A Shikimate 5-dehydrogena 96.9 0.0019 6.5E-08 71.0 9.4 92 954-1049 117-217 (271)
220 3qha_A Putative oxidoreductase 96.9 0.00059 2E-08 75.9 5.0 68 307-376 57-125 (296)
221 1leh_A Leucine dehydrogenase; 96.9 0.00054 1.9E-08 78.7 4.7 36 698-733 170-205 (364)
222 3pwz_A Shikimate dehydrogenase 96.9 0.0023 7.9E-08 70.6 9.3 107 953-1063 117-231 (272)
223 2qrj_A Saccharopine dehydrogen 96.9 0.00088 3E-08 77.3 6.0 83 955-1046 213-300 (394)
224 3ic5_A Putative saccharopine d 96.8 0.001 3.6E-08 62.2 5.3 66 955-1020 4-79 (118)
225 3hwr_A 2-dehydropantoate 2-red 96.8 0.0012 4.2E-08 74.1 6.9 103 954-1061 17-134 (318)
226 2z2v_A Hypothetical protein PH 96.8 0.0007 2.4E-08 77.9 4.8 107 953-1066 13-127 (365)
227 1lss_A TRK system potassium up 96.8 0.0019 6.6E-08 62.3 7.2 88 956-1045 4-102 (140)
228 3i83_A 2-dehydropantoate 2-red 96.8 0.0023 7.8E-08 71.9 8.8 107 957-1067 3-125 (320)
229 3vtf_A UDP-glucose 6-dehydroge 96.8 0.0028 9.6E-08 74.5 9.6 136 955-1091 20-193 (444)
230 4dll_A 2-hydroxy-3-oxopropiona 96.8 0.00041 1.4E-08 78.2 2.3 69 308-376 74-144 (320)
231 2hmt_A YUAA protein; RCK, KTN, 96.8 0.0012 4.2E-08 63.9 5.4 94 954-1049 4-107 (144)
232 3hn2_A 2-dehydropantoate 2-red 96.7 0.0038 1.3E-07 69.8 9.8 107 957-1068 3-124 (312)
233 2g5c_A Prephenate dehydrogenas 96.7 0.0014 4.9E-08 71.9 5.9 106 312-430 53-162 (281)
234 3vtf_A UDP-glucose 6-dehydroge 96.7 0.0032 1.1E-07 73.9 9.1 84 953-1045 330-426 (444)
235 4b4u_A Bifunctional protein fo 96.7 0.0048 1.7E-07 68.5 9.8 77 953-1048 176-253 (303)
236 1omo_A Alanine dehydrogenase; 96.6 0.0026 9E-08 71.8 7.8 86 955-1047 124-218 (322)
237 3llv_A Exopolyphosphatase-rela 96.6 0.0015 5.2E-08 63.9 5.1 87 955-1043 5-101 (141)
238 1vl6_A Malate oxidoreductase; 96.6 0.0061 2.1E-07 70.1 10.5 93 953-1050 189-298 (388)
239 3pef_A 6-phosphogluconate dehy 96.6 0.0009 3.1E-08 73.9 3.6 68 308-375 44-114 (287)
240 3pdu_A 3-hydroxyisobutyrate de 96.6 0.00074 2.5E-08 74.6 2.8 68 308-375 44-114 (287)
241 3doj_A AT3G25530, dehydrogenas 96.6 0.00099 3.4E-08 74.6 3.7 69 307-375 63-134 (310)
242 1iuk_A Hypothetical protein TT 96.5 0.0041 1.4E-07 61.7 7.4 104 955-1067 12-120 (140)
243 4e21_A 6-phosphogluconate dehy 96.5 0.0023 8E-08 73.3 5.8 77 308-386 65-145 (358)
244 3fbt_A Chorismate mutase and s 96.4 0.0071 2.4E-07 67.1 9.1 104 954-1063 120-230 (282)
245 4ezb_A Uncharacterized conserv 96.4 0.0035 1.2E-07 70.5 6.7 67 307-376 74-141 (317)
246 1nvt_A Shikimate 5'-dehydrogen 96.4 0.0042 1.4E-07 68.8 7.1 103 954-1062 126-244 (287)
247 2d59_A Hypothetical protein PH 96.4 0.0058 2E-07 60.8 7.4 102 956-1068 22-128 (144)
248 3r7f_A Aspartate carbamoyltran 96.3 0.023 7.9E-07 63.5 12.2 93 953-1046 144-250 (304)
249 3jyo_A Quinate/shikimate dehyd 96.2 0.0081 2.8E-07 66.6 8.2 107 953-1063 124-245 (283)
250 4hkt_A Inositol 2-dehydrogenas 96.2 0.0038 1.3E-07 70.3 5.6 65 957-1021 4-74 (331)
251 2ewd_A Lactate dehydrogenase,; 96.2 0.0045 1.5E-07 69.6 6.0 112 956-1068 4-145 (317)
252 2h78_A Hibadh, 3-hydroxyisobut 96.2 0.0021 7.1E-08 71.4 3.1 66 308-373 46-114 (302)
253 3g0o_A 3-hydroxyisobutyrate de 96.1 0.0011 3.8E-08 73.8 0.9 64 312-375 56-121 (303)
254 3ado_A Lambda-crystallin; L-gu 96.1 0.011 3.8E-07 66.6 8.6 134 956-1098 6-166 (319)
255 3ego_A Probable 2-dehydropanto 96.1 0.0046 1.6E-07 69.2 5.3 105 957-1067 3-119 (307)
256 1tlt_A Putative oxidoreductase 96.0 0.011 3.9E-07 66.0 8.5 105 957-1066 6-118 (319)
257 1hyh_A L-hicdh, L-2-hydroxyiso 96.0 0.0043 1.5E-07 69.4 5.1 97 957-1054 2-130 (309)
258 3c7a_A Octopine dehydrogenase; 96.0 0.006 2.1E-07 70.6 6.4 87 957-1045 3-115 (404)
259 3euw_A MYO-inositol dehydrogen 96.0 0.0055 1.9E-07 69.3 5.6 65 957-1021 5-76 (344)
260 2hk9_A Shikimate dehydrogenase 95.9 0.0022 7.5E-08 70.7 1.9 79 618-733 83-161 (275)
261 3q2i_A Dehydrogenase; rossmann 95.9 0.0056 1.9E-07 69.6 5.3 66 956-1021 13-86 (354)
262 4gbj_A 6-phosphogluconate dehy 95.9 0.0067 2.3E-07 67.6 5.7 75 306-382 46-121 (297)
263 1j5p_A Aspartate dehydrogenase 95.9 0.011 3.6E-07 64.5 7.0 99 954-1064 10-112 (253)
264 3db2_A Putative NADPH-dependen 95.9 0.0063 2.1E-07 69.2 5.5 66 957-1022 6-78 (354)
265 3tnl_A Shikimate dehydrogenase 95.9 0.013 4.4E-07 66.0 7.9 108 953-1063 151-279 (315)
266 1guz_A Malate dehydrogenase; o 95.8 0.0091 3.1E-07 66.9 6.5 111 957-1069 1-143 (310)
267 1a5z_A L-lactate dehydrogenase 95.8 0.009 3.1E-07 67.2 6.5 110 957-1068 1-140 (319)
268 2dvm_A Malic enzyme, 439AA lon 95.8 0.021 7.1E-07 67.0 9.5 106 954-1064 184-312 (439)
269 1yb4_A Tartronic semialdehyde 95.8 0.0038 1.3E-07 68.8 3.1 62 312-373 50-113 (295)
270 1pjc_A Protein (L-alanine dehy 95.8 0.052 1.8E-06 62.1 12.7 107 617-734 84-200 (361)
271 3uuw_A Putative oxidoreductase 95.8 0.0082 2.8E-07 66.8 5.8 104 956-1064 6-117 (308)
272 3e9m_A Oxidoreductase, GFO/IDH 95.7 0.0073 2.5E-07 68.0 5.2 65 957-1021 6-78 (330)
273 3ezy_A Dehydrogenase; structur 95.7 0.008 2.7E-07 68.0 5.3 65 957-1021 3-75 (344)
274 3fr7_A Putative ketol-acid red 95.7 0.0088 3E-07 70.5 5.7 78 697-776 49-152 (525)
275 3g17_A Similar to 2-dehydropan 95.7 0.0032 1.1E-07 69.8 1.9 95 957-1053 3-103 (294)
276 1id1_A Putative potassium chan 95.7 0.012 4.2E-07 58.4 6.0 92 955-1048 2-107 (153)
277 1jw9_B Molybdopterin biosynthe 95.7 0.0037 1.3E-07 68.0 2.3 106 929-1045 11-152 (249)
278 1yqd_A Sinapyl alcohol dehydro 95.6 0.011 3.9E-07 67.4 6.5 89 955-1048 187-284 (366)
279 1npy_A Hypothetical shikimate 95.6 0.017 5.9E-07 63.6 7.6 90 955-1049 118-216 (271)
280 3q2o_A Phosphoribosylaminoimid 95.6 0.015 5.2E-07 66.9 7.2 65 953-1017 11-82 (389)
281 3evn_A Oxidoreductase, GFO/IDH 95.6 0.013 4.4E-07 66.0 6.4 65 957-1021 6-78 (329)
282 1pg5_A Aspartate carbamoyltran 95.5 0.084 2.9E-06 58.8 12.7 94 953-1046 146-260 (299)
283 1xea_A Oxidoreductase, GFO/IDH 95.5 0.011 3.9E-07 66.2 5.7 105 957-1066 3-116 (323)
284 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.019 6.5E-07 61.4 7.1 92 949-1046 24-121 (223)
285 3qsg_A NAD-binding phosphogluc 95.5 0.0075 2.5E-07 67.6 4.1 55 676-733 2-57 (312)
286 2ef0_A Ornithine carbamoyltran 95.5 0.12 3.9E-06 57.8 13.5 102 953-1054 151-272 (301)
287 4e12_A Diketoreductase; oxidor 95.5 0.014 4.8E-07 64.3 6.2 101 312-432 77-177 (283)
288 2yjz_A Metalloreductase steap4 94.5 0.0024 8.3E-08 67.1 0.0 86 269-361 24-110 (201)
289 2ho3_A Oxidoreductase, GFO/IDH 95.5 0.013 4.5E-07 65.7 6.0 64 958-1021 3-73 (325)
290 3dtt_A NADP oxidoreductase; st 95.5 0.01 3.4E-07 64.1 4.9 41 695-735 13-53 (245)
291 3rc1_A Sugar 3-ketoreductase; 95.4 0.01 3.4E-07 67.6 5.0 69 953-1021 24-100 (350)
292 1pzg_A LDH, lactate dehydrogen 95.4 0.022 7.7E-07 64.4 7.6 114 956-1069 9-157 (331)
293 2v6b_A L-LDH, L-lactate dehydr 95.4 0.015 5.3E-07 64.9 6.2 112 957-1068 1-138 (304)
294 1vpd_A Tartronate semialdehyde 95.4 0.0041 1.4E-07 68.7 1.3 104 267-373 8-116 (299)
295 3e18_A Oxidoreductase; dehydro 95.3 0.017 5.9E-07 65.8 6.6 66 956-1021 5-76 (359)
296 4gwg_A 6-phosphogluconate dehy 95.3 0.009 3.1E-07 71.1 4.3 74 312-386 57-133 (484)
297 2i6u_A Otcase, ornithine carba 95.3 0.17 5.7E-06 56.7 14.2 94 953-1046 145-265 (307)
298 3cky_A 2-hydroxymethyl glutara 95.3 0.0059 2E-07 67.5 2.4 66 308-373 47-115 (301)
299 2cvz_A Dehydrogenase, 3-hydrox 95.2 0.0056 1.9E-07 67.1 2.0 100 269-373 6-107 (289)
300 3obb_A Probable 3-hydroxyisobu 95.2 0.0074 2.5E-07 67.5 3.0 75 306-382 44-121 (300)
301 2glx_A 1,5-anhydro-D-fructose 95.2 0.017 5.7E-07 64.8 5.7 64 958-1021 2-73 (332)
302 4f2g_A Otcase 1, ornithine car 95.1 0.14 4.8E-06 57.3 12.8 94 953-1046 151-264 (309)
303 2a9f_A Putative malic enzyme ( 95.1 0.021 7.3E-07 65.7 6.3 151 953-1121 185-358 (398)
304 3l9w_A Glutathione-regulated p 95.1 0.014 5E-07 68.0 4.8 90 956-1047 4-103 (413)
305 3ec7_A Putative dehydrogenase; 95.0 0.023 7.8E-07 64.8 6.4 68 954-1021 21-98 (357)
306 3ggo_A Prephenate dehydrogenas 95.0 0.024 8.2E-07 63.7 6.2 59 312-372 85-144 (314)
307 1t2d_A LDH-P, L-lactate dehydr 95.0 0.026 8.9E-07 63.6 6.5 111 957-1068 5-150 (322)
308 3mz0_A Inositol 2-dehydrogenas 94.9 0.02 6.7E-07 64.8 5.4 65 957-1021 3-77 (344)
309 3t4e_A Quinate/shikimate dehyd 94.9 0.023 7.9E-07 63.8 5.6 68 954-1021 146-231 (312)
310 2zyd_A 6-phosphogluconate dehy 94.9 0.022 7.5E-07 67.8 5.8 63 312-375 67-132 (480)
311 3c1a_A Putative oxidoreductase 94.8 0.017 5.9E-07 64.4 4.6 102 957-1064 11-120 (315)
312 3l4b_C TRKA K+ channel protien 94.8 0.014 4.9E-07 61.5 3.7 89 957-1047 1-100 (218)
313 2cdc_A Glucose dehydrogenase g 94.8 0.016 5.5E-07 66.1 4.3 92 953-1048 178-280 (366)
314 2hjr_A Malate dehydrogenase; m 94.8 0.028 9.6E-07 63.5 6.1 114 957-1071 15-160 (328)
315 3cea_A MYO-inositol 2-dehydrog 94.8 0.027 9.1E-07 63.5 5.8 102 957-1063 9-121 (346)
316 3m2t_A Probable dehydrogenase; 94.7 0.026 8.8E-07 64.4 5.7 65 956-1020 5-78 (359)
317 2gf2_A Hibadh, 3-hydroxyisobut 94.7 0.0065 2.2E-07 67.0 0.5 101 269-372 5-110 (296)
318 2uyy_A N-PAC protein; long-cha 94.6 0.018 6.2E-07 64.2 4.0 61 313-373 79-141 (316)
319 1pvv_A Otcase, ornithine carba 94.6 0.27 9.2E-06 55.2 13.4 94 953-1046 152-271 (315)
320 3b1f_A Putative prephenate deh 94.6 0.01 3.5E-07 65.3 1.9 100 268-372 10-117 (290)
321 3bio_A Oxidoreductase, GFO/IDH 94.6 0.028 9.4E-07 62.8 5.3 61 957-1020 10-75 (304)
322 3fef_A Putative glucosidase LP 94.5 0.03 1E-06 66.0 5.7 104 955-1059 4-159 (450)
323 4ep1_A Otcase, ornithine carba 94.5 0.31 1.1E-05 55.2 13.5 99 954-1052 177-303 (340)
324 1vlv_A Otcase, ornithine carba 94.4 0.23 7.8E-06 55.9 12.2 94 953-1046 164-285 (325)
325 4amu_A Ornithine carbamoyltran 94.4 0.18 6.1E-06 57.6 11.4 93 954-1046 178-300 (365)
326 3two_A Mannitol dehydrogenase; 94.3 0.05 1.7E-06 61.5 6.8 90 955-1049 176-268 (348)
327 1ml4_A Aspartate transcarbamoy 94.3 0.15 5E-06 57.2 10.4 94 953-1046 152-268 (308)
328 3ohs_X Trans-1,2-dihydrobenzen 94.3 0.041 1.4E-06 61.9 6.0 65 957-1021 3-77 (334)
329 4had_A Probable oxidoreductase 94.3 0.034 1.2E-06 62.9 5.3 65 957-1021 24-97 (350)
330 2vt3_A REX, redox-sensing tran 94.3 0.033 1.1E-06 59.3 4.8 64 957-1020 86-155 (215)
331 1np3_A Ketol-acid reductoisome 94.3 0.02 6.8E-07 64.9 3.3 38 698-735 13-50 (338)
332 1ldn_A L-lactate dehydrogenase 94.2 0.026 8.7E-07 63.5 4.0 112 956-1068 6-147 (316)
333 2axq_A Saccharopine dehydrogen 94.2 0.029 1E-06 66.5 4.7 69 953-1021 20-99 (467)
334 1dxh_A Ornithine carbamoyltran 94.2 0.24 8.1E-06 56.1 11.8 94 953-1046 152-274 (335)
335 1f06_A MESO-diaminopimelate D- 94.2 0.039 1.3E-06 62.1 5.4 101 957-1064 4-110 (320)
336 3orq_A N5-carboxyaminoimidazol 94.1 0.063 2.1E-06 61.6 7.2 64 953-1016 9-79 (377)
337 2raf_A Putative dinucleotide-b 94.1 0.04 1.4E-06 58.0 5.1 37 697-733 15-51 (209)
338 1zud_1 Adenylyltransferase THI 94.1 0.03 1E-06 60.9 4.2 89 953-1045 25-149 (251)
339 3p7m_A Malate dehydrogenase; p 94.1 0.082 2.8E-06 59.6 8.0 114 955-1069 4-147 (321)
340 1h6d_A Precursor form of gluco 94.1 0.034 1.2E-06 65.2 5.0 67 955-1021 82-161 (433)
341 1oth_A Protein (ornithine tran 94.1 0.24 8.2E-06 55.7 11.6 95 953-1047 152-272 (321)
342 3pqe_A L-LDH, L-lactate dehydr 94.1 0.059 2E-06 60.9 6.7 116 955-1071 4-151 (326)
343 3nep_X Malate dehydrogenase; h 94.1 0.073 2.5E-06 59.8 7.4 112 957-1069 1-143 (314)
344 1piw_A Hypothetical zinc-type 94.1 0.064 2.2E-06 61.0 7.0 90 955-1048 179-278 (360)
345 3fhl_A Putative oxidoreductase 94.0 0.047 1.6E-06 62.2 5.9 65 957-1021 6-76 (362)
346 2aef_A Calcium-gated potassium 94.0 0.032 1.1E-06 59.4 4.0 84 956-1043 9-102 (234)
347 2we8_A Xanthine dehydrogenase; 93.9 0.12 3.9E-06 59.8 8.9 94 956-1070 204-303 (386)
348 3kux_A Putative oxidoreductase 93.9 0.047 1.6E-06 61.9 5.5 66 957-1022 8-79 (352)
349 2czc_A Glyceraldehyde-3-phosph 93.9 0.07 2.4E-06 60.4 6.8 64 958-1021 4-90 (334)
350 4a7p_A UDP-glucose dehydrogena 93.9 0.12 4E-06 61.0 8.8 99 953-1056 319-430 (446)
351 1lld_A L-lactate dehydrogenase 93.8 0.061 2.1E-06 59.9 6.2 95 956-1051 7-129 (319)
352 2nu8_A Succinyl-COA ligase [AD 93.8 0.071 2.4E-06 59.1 6.6 104 956-1065 7-116 (288)
353 1ur5_A Malate dehydrogenase; o 93.8 0.068 2.3E-06 59.8 6.5 110 957-1068 3-143 (309)
354 1y6j_A L-lactate dehydrogenase 93.8 0.1 3.6E-06 58.6 8.0 116 956-1072 7-153 (318)
355 3gdo_A Uncharacterized oxidore 93.8 0.054 1.8E-06 61.7 5.7 65 957-1021 6-76 (358)
356 3zwc_A Peroxisomal bifunctiona 93.7 0.14 4.8E-06 63.9 9.7 133 956-1097 316-471 (742)
357 1duv_G Octase-1, ornithine tra 93.7 0.23 7.9E-06 56.1 10.6 93 954-1046 153-274 (333)
358 3gd5_A Otcase, ornithine carba 93.7 0.45 1.5E-05 53.5 12.8 94 953-1046 154-273 (323)
359 2pv7_A T-protein [includes: ch 93.7 0.051 1.7E-06 60.3 5.2 50 674-733 4-54 (298)
360 2w37_A Ornithine carbamoyltran 93.7 0.41 1.4E-05 54.5 12.6 95 953-1047 173-296 (359)
361 1b7g_O Protein (glyceraldehyde 93.7 0.079 2.7E-06 60.2 6.8 64 958-1021 3-88 (340)
362 3e82_A Putative oxidoreductase 93.7 0.072 2.5E-06 60.8 6.5 65 957-1021 8-78 (364)
363 4fcc_A Glutamate dehydrogenase 93.7 0.13 4.3E-06 60.3 8.6 109 953-1068 232-370 (450)
364 1ff9_A Saccharopine reductase; 93.6 0.054 1.8E-06 63.9 5.5 67 955-1021 2-79 (450)
365 1uuf_A YAHK, zinc-type alcohol 93.6 0.069 2.4E-06 61.0 6.3 89 955-1048 194-290 (369)
366 3abi_A Putative uncharacterize 93.6 0.059 2E-06 61.6 5.6 66 955-1021 15-88 (365)
367 3vku_A L-LDH, L-lactate dehydr 93.6 0.07 2.4E-06 60.3 6.1 118 954-1071 7-154 (326)
368 3grf_A Ornithine carbamoyltran 93.5 0.62 2.1E-05 52.5 13.7 94 953-1046 158-283 (328)
369 3d0o_A L-LDH 1, L-lactate dehy 93.5 0.074 2.5E-06 59.8 6.2 116 955-1071 5-152 (317)
370 2p2s_A Putative oxidoreductase 93.5 0.11 3.7E-06 58.4 7.5 65 957-1021 5-77 (336)
371 1cdo_A Alcohol dehydrogenase; 93.5 0.14 4.7E-06 58.5 8.4 89 955-1048 192-296 (374)
372 4fb5_A Probable oxidoreductase 93.4 0.079 2.7E-06 60.3 6.3 69 953-1021 22-105 (393)
373 3e8x_A Putative NAD-dependent 93.4 0.097 3.3E-06 55.2 6.6 72 950-1021 15-95 (236)
374 2iz1_A 6-phosphogluconate dehy 93.4 0.049 1.7E-06 64.7 4.7 64 312-376 57-123 (474)
375 1ydw_A AX110P-like protein; st 93.4 0.072 2.5E-06 60.5 5.9 105 957-1066 7-124 (362)
376 1rjw_A ADH-HT, alcohol dehydro 93.4 0.056 1.9E-06 60.9 4.9 89 955-1048 164-263 (339)
377 3tum_A Shikimate dehydrogenase 93.3 0.15 5.1E-06 56.0 8.0 92 954-1045 123-224 (269)
378 4a8t_A Putrescine carbamoyltra 93.3 0.79 2.7E-05 51.9 14.0 93 953-1046 172-292 (339)
379 1xyg_A Putative N-acetyl-gamma 93.3 0.16 5.5E-06 58.1 8.6 86 955-1047 15-113 (359)
380 2jhf_A Alcohol dehydrogenase E 93.2 0.15 5.1E-06 58.2 8.2 88 955-1047 191-294 (374)
381 3csu_A Protein (aspartate carb 93.2 0.33 1.1E-05 54.3 10.6 94 953-1046 151-267 (310)
382 3gvi_A Malate dehydrogenase; N 93.2 0.16 5.3E-06 57.4 8.1 114 954-1069 5-149 (324)
383 2p4q_A 6-phosphogluconate dehy 93.2 0.073 2.5E-06 63.6 5.7 62 313-375 64-128 (497)
384 1pjq_A CYSG, siroheme synthase 93.2 0.074 2.5E-06 62.8 5.7 73 950-1023 6-84 (457)
385 3tpf_A Otcase, ornithine carba 93.2 0.78 2.7E-05 51.2 13.6 102 953-1054 142-273 (307)
386 1ez4_A Lactate dehydrogenase; 93.2 0.056 1.9E-06 60.8 4.4 114 957-1071 6-150 (318)
387 2pgd_A 6-phosphogluconate dehy 93.1 0.057 2E-06 64.2 4.7 71 312-383 55-128 (482)
388 2zqz_A L-LDH, L-lactate dehydr 93.1 0.064 2.2E-06 60.6 4.8 112 956-1068 9-149 (326)
389 3oj0_A Glutr, glutamyl-tRNA re 93.1 0.036 1.2E-06 54.5 2.4 34 701-734 21-54 (144)
390 1p0f_A NADP-dependent alcohol 93.1 0.14 4.9E-06 58.3 7.8 88 955-1047 191-294 (373)
391 4a8p_A Putrescine carbamoyltra 93.1 0.89 3E-05 51.7 14.1 99 953-1052 150-279 (355)
392 3f4l_A Putative oxidoreductase 93.1 0.076 2.6E-06 60.0 5.4 65 957-1021 3-76 (345)
393 2cf5_A Atccad5, CAD, cinnamyl 93.0 0.099 3.4E-06 59.3 6.3 88 955-1047 180-276 (357)
394 3moi_A Probable dehydrogenase; 93.0 0.052 1.8E-06 62.4 4.0 65 957-1021 3-75 (387)
395 3ew7_A LMO0794 protein; Q8Y8U8 93.0 0.19 6.5E-06 51.9 8.0 93 957-1049 1-105 (221)
396 1hdo_A Biliverdin IX beta redu 93.0 0.16 5.6E-06 51.7 7.4 96 956-1051 3-115 (206)
397 1pl8_A Human sorbitol dehydrog 93.0 0.15 5E-06 57.9 7.6 89 955-1048 171-275 (356)
398 1i36_A Conserved hypothetical 92.9 0.035 1.2E-06 60.1 2.2 60 308-372 45-104 (264)
399 2d8a_A PH0655, probable L-thre 92.9 0.055 1.9E-06 61.1 4.0 88 955-1047 167-268 (348)
400 2fzw_A Alcohol dehydrogenase c 92.9 0.15 5.2E-06 58.0 7.7 88 955-1047 190-293 (373)
401 2g1u_A Hypothetical protein TM 92.9 0.1 3.5E-06 51.8 5.5 36 698-733 16-51 (155)
402 3dty_A Oxidoreductase, GFO/IDH 92.8 0.076 2.6E-06 61.3 5.0 67 955-1021 11-96 (398)
403 3on5_A BH1974 protein; structu 92.8 0.17 5.8E-06 57.9 7.7 134 956-1123 199-345 (362)
404 2dt5_A AT-rich DNA-binding pro 92.7 0.066 2.3E-06 56.8 4.0 64 957-1021 81-151 (211)
405 3aog_A Glutamate dehydrogenase 92.7 0.44 1.5E-05 55.8 11.1 108 953-1068 232-360 (440)
406 1iz0_A Quinone oxidoreductase; 92.7 0.083 2.8E-06 58.4 4.9 86 955-1047 125-219 (302)
407 3qy9_A DHPR, dihydrodipicolina 92.7 0.19 6.7E-06 54.3 7.6 80 957-1048 4-85 (243)
408 3h9e_O Glyceraldehyde-3-phosph 92.6 0.08 2.7E-06 59.9 4.6 32 702-733 8-40 (346)
409 2nqt_A N-acetyl-gamma-glutamyl 92.6 0.23 7.9E-06 56.7 8.5 94 957-1056 10-120 (352)
410 3lk7_A UDP-N-acetylmuramoylala 92.6 0.15 5.1E-06 60.0 7.1 112 953-1064 6-138 (451)
411 3i23_A Oxidoreductase, GFO/IDH 92.6 0.12 4E-06 58.6 6.0 65 957-1021 3-76 (349)
412 1e3j_A NADP(H)-dependent ketos 92.5 0.19 6.6E-06 56.7 7.7 89 955-1048 168-273 (352)
413 3ip1_A Alcohol dehydrogenase, 92.5 0.12 4.3E-06 59.6 6.3 90 955-1048 213-320 (404)
414 1e3i_A Alcohol dehydrogenase, 92.5 0.22 7.6E-06 56.7 8.3 88 955-1047 195-298 (376)
415 4fgw_A Glycerol-3-phosphate de 92.5 0.094 3.2E-06 60.6 5.1 92 957-1050 35-155 (391)
416 3ktd_A Prephenate dehydrogenas 92.5 0.074 2.5E-06 60.5 4.2 33 702-734 9-41 (341)
417 3tl2_A Malate dehydrogenase; c 92.5 0.16 5.5E-06 57.0 6.9 115 954-1069 6-152 (315)
418 2i6t_A Ubiquitin-conjugating e 92.4 0.081 2.8E-06 59.1 4.3 116 956-1072 14-155 (303)
419 3r6d_A NAD-dependent epimerase 92.3 0.17 5.9E-06 52.7 6.5 91 957-1051 6-112 (221)
420 3q2o_A Phosphoribosylaminoimid 92.3 0.11 3.6E-06 59.8 5.3 37 698-734 11-47 (389)
421 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.2 0.072 2.5E-06 63.3 3.8 71 312-383 57-130 (478)
422 1oju_A MDH, malate dehydrogena 92.2 0.16 5.3E-06 56.6 6.3 111 957-1071 1-147 (294)
423 3ff4_A Uncharacterized protein 92.1 0.16 5.3E-06 49.2 5.4 100 956-1067 4-108 (122)
424 3d6n_B Aspartate carbamoyltran 92.1 0.34 1.2E-05 53.7 8.8 66 954-1020 144-214 (291)
425 4gqa_A NAD binding oxidoreduct 92.1 0.1 3.6E-06 60.3 4.9 69 953-1021 22-107 (412)
426 2hcy_A Alcohol dehydrogenase 1 92.1 0.15 5.2E-06 57.5 6.2 89 955-1048 169-271 (347)
427 2nvw_A Galactose/lactose metab 92.1 0.11 3.7E-06 61.7 5.2 66 955-1020 38-118 (479)
428 3ldh_A Lactate dehydrogenase; 92.1 0.094 3.2E-06 59.3 4.3 112 955-1068 20-162 (330)
429 3qvo_A NMRA family protein; st 92.1 0.13 4.6E-06 54.3 5.4 96 953-1050 20-128 (236)
430 3o9z_A Lipopolysaccaride biosy 92.0 0.24 8.3E-06 55.2 7.6 65 957-1021 4-83 (312)
431 1obb_A Maltase, alpha-glucosid 92.0 0.099 3.4E-06 62.0 4.6 113 956-1069 3-174 (480)
432 1pqw_A Polyketide synthase; ro 92.0 0.069 2.4E-06 55.0 2.9 88 955-1048 38-139 (198)
433 2ozp_A N-acetyl-gamma-glutamyl 92.0 0.25 8.5E-06 56.2 7.7 85 957-1047 5-100 (345)
434 3s2e_A Zinc-containing alcohol 91.9 0.12 4.1E-06 58.1 5.0 88 955-1047 166-264 (340)
435 1lc0_A Biliverdin reductase A; 91.9 0.12 4.2E-06 57.1 5.0 101 957-1064 8-116 (294)
436 3c85_A Putative glutathione-re 91.9 0.11 3.6E-06 53.0 4.1 37 697-733 35-72 (183)
437 4e4t_A Phosphoribosylaminoimid 91.9 0.16 5.3E-06 59.3 6.0 64 953-1016 32-102 (419)
438 3ojo_A CAP5O; rossmann fold, c 91.8 0.46 1.6E-05 55.6 10.0 88 953-1050 312-410 (431)
439 3v5n_A Oxidoreductase; structu 91.8 0.11 3.7E-06 60.5 4.6 66 956-1021 37-121 (417)
440 2hmt_A YUAA protein; RCK, KTN, 91.8 0.093 3.2E-06 50.4 3.4 35 699-733 4-38 (144)
441 3eag_A UDP-N-acetylmuramate:L- 91.7 0.31 1.1E-05 54.7 8.2 109 955-1063 3-133 (326)
442 3uko_A Alcohol dehydrogenase c 91.7 0.25 8.6E-06 56.4 7.5 88 955-1047 193-296 (378)
443 1oi7_A Succinyl-COA synthetase 91.7 0.21 7.1E-06 55.4 6.5 106 955-1066 6-117 (288)
444 4h31_A Otcase, ornithine carba 91.6 2.7 9.2E-05 47.9 15.7 94 953-1046 178-300 (358)
445 4ew6_A D-galactose-1-dehydroge 91.6 0.17 5.8E-06 57.0 5.8 111 954-1068 23-162 (330)
446 2yfq_A Padgh, NAD-GDH, NAD-spe 91.5 0.33 1.1E-05 56.6 8.2 107 953-1067 209-341 (421)
447 4eye_A Probable oxidoreductase 91.4 0.12 4.2E-06 58.2 4.4 86 955-1046 159-257 (342)
448 2tmg_A Protein (glutamate dehy 91.4 1.1 3.6E-05 52.2 12.3 108 953-1068 206-335 (415)
449 3oa2_A WBPB; oxidoreductase, s 91.4 0.27 9.4E-06 55.0 7.3 65 957-1021 4-84 (318)
450 1zh8_A Oxidoreductase; TM0312, 91.4 0.18 6E-06 57.0 5.6 65 957-1021 19-93 (340)
451 1cf2_P Protein (glyceraldehyde 91.3 0.14 4.8E-06 58.1 4.7 64 958-1021 3-89 (337)
452 3ius_A Uncharacterized conserv 91.3 0.19 6.4E-06 54.4 5.5 66 956-1021 5-74 (286)
453 1v9l_A Glutamate dehydrogenase 91.3 0.48 1.7E-05 55.2 9.2 108 953-1068 207-341 (421)
454 4h3v_A Oxidoreductase domain p 91.2 0.13 4.3E-06 58.5 4.3 65 957-1021 7-86 (390)
455 3btv_A Galactose/lactose metab 91.2 0.15 5.3E-06 59.6 5.1 66 956-1021 20-100 (438)
456 3u3x_A Oxidoreductase; structu 91.2 0.27 9.2E-06 56.0 7.0 65 956-1020 26-98 (361)
457 3k92_A NAD-GDH, NAD-specific g 91.2 0.58 2E-05 54.5 9.7 108 953-1068 218-345 (424)
458 3uog_A Alcohol dehydrogenase; 91.1 0.15 5.2E-06 57.9 4.8 87 955-1047 189-288 (363)
459 2fp4_A Succinyl-COA ligase [GD 91.1 0.26 8.8E-06 55.1 6.6 108 953-1066 10-125 (305)
460 4ej6_A Putative zinc-binding d 91.1 0.14 4.6E-06 58.6 4.4 88 955-1047 182-285 (370)
461 3h2s_A Putative NADH-flavin re 91.1 0.36 1.2E-05 50.0 7.4 91 958-1048 2-106 (224)
462 1lss_A TRK system potassium up 91.1 0.18 6.3E-06 48.1 4.7 33 701-733 4-36 (140)
463 2dq4_A L-threonine 3-dehydroge 91.0 0.14 4.7E-06 57.8 4.3 87 955-1047 164-263 (343)
464 4gmf_A Yersiniabactin biosynth 91.0 0.18 6.3E-06 57.9 5.4 65 956-1021 7-77 (372)
465 3llv_A Exopolyphosphatase-rela 91.0 0.15 5.1E-06 49.5 4.0 34 700-733 5-38 (141)
466 3sds_A Ornithine carbamoyltran 90.9 1.6 5.4E-05 49.7 12.8 94 953-1046 185-308 (353)
467 3keo_A Redox-sensing transcrip 90.9 0.14 4.7E-06 54.3 3.8 66 956-1021 84-159 (212)
468 3gg2_A Sugar dehydrogenase, UD 90.9 0.38 1.3E-05 56.6 8.0 93 953-1049 315-421 (450)
469 1f8f_A Benzyl alcohol dehydrog 90.8 0.13 4.6E-06 58.5 4.0 88 955-1047 190-290 (371)
470 3aoe_E Glutamate dehydrogenase 90.8 0.93 3.2E-05 52.7 11.0 108 953-1068 215-339 (419)
471 1lu9_A Methylene tetrahydromet 90.8 0.48 1.6E-05 52.0 8.3 38 954-991 117-155 (287)
472 4ekn_B Aspartate carbamoyltran 90.8 1.5 5.2E-05 48.9 12.3 65 953-1017 148-225 (306)
473 3gms_A Putative NADPH:quinone 90.7 0.15 5.1E-06 57.4 4.2 87 955-1047 144-244 (340)
474 2q3e_A UDP-glucose 6-dehydroge 90.7 0.44 1.5E-05 56.2 8.4 95 953-1050 326-446 (467)
475 2vns_A Metalloreductase steap3 90.5 0.16 5.4E-06 53.6 3.9 34 700-733 27-60 (215)
476 2ejw_A HDH, homoserine dehydro 90.5 0.17 5.8E-06 57.2 4.4 101 958-1063 5-116 (332)
477 3fwz_A Inner membrane protein 90.4 0.19 6.4E-06 49.1 4.2 32 702-733 8-39 (140)
478 2h6e_A ADH-4, D-arabinose 1-de 90.4 0.16 5.4E-06 57.3 4.0 88 955-1047 170-270 (344)
479 3goh_A Alcohol dehydrogenase, 90.3 0.16 5.6E-06 56.3 4.1 85 955-1046 142-229 (315)
480 2xxj_A L-LDH, L-lactate dehydr 90.3 0.25 8.5E-06 55.3 5.5 111 957-1068 1-140 (310)
481 2ixa_A Alpha-N-acetylgalactosa 90.3 0.3 1E-05 57.2 6.5 66 956-1021 20-102 (444)
482 2yyy_A Glyceraldehyde-3-phosph 90.3 0.55 1.9E-05 53.3 8.4 65 957-1021 3-92 (343)
483 3do5_A HOM, homoserine dehydro 90.3 0.4 1.4E-05 54.1 7.2 107 958-1065 4-135 (327)
484 3fpc_A NADP-dependent alcohol 90.2 0.17 5.9E-06 57.1 4.2 87 955-1046 166-266 (352)
485 4dup_A Quinone oxidoreductase; 90.2 0.14 4.7E-06 58.1 3.3 87 955-1047 167-266 (353)
486 3ic5_A Putative saccharopine d 90.1 0.2 6.7E-06 46.4 3.8 34 700-733 4-38 (118)
487 4b7c_A Probable oxidoreductase 90.0 0.13 4.3E-06 57.8 2.8 89 955-1049 149-251 (336)
488 2ph5_A Homospermidine synthase 89.9 0.31 1.1E-05 57.5 6.1 34 957-990 14-51 (480)
489 1u8x_X Maltose-6'-phosphate gl 89.9 0.16 5.3E-06 60.3 3.6 114 955-1068 27-193 (472)
490 1v3u_A Leukotriene B4 12- hydr 89.9 0.16 5.6E-06 56.7 3.6 87 955-1047 145-245 (333)
491 2d4a_B Malate dehydrogenase; a 89.9 0.37 1.3E-05 53.8 6.5 88 958-1047 1-117 (308)
492 1js1_X Transcarbamylase; alpha 89.9 1.6 5.5E-05 49.0 11.5 90 954-1045 167-274 (324)
493 4ina_A Saccharopine dehydrogen 89.7 0.16 5.4E-06 59.0 3.4 64 957-1020 2-86 (405)
494 3rui_A Ubiquitin-like modifier 89.7 0.36 1.2E-05 54.7 6.2 90 953-1046 31-171 (340)
495 2vn8_A Reticulon-4-interacting 89.5 0.7 2.4E-05 52.6 8.6 90 955-1049 183-283 (375)
496 1zej_A HBD-9, 3-hydroxyacyl-CO 89.5 0.28 9.5E-06 54.5 5.0 35 699-734 10-44 (293)
497 2c0c_A Zinc binding alcohol de 89.4 0.15 5E-06 58.1 2.8 88 955-1048 163-263 (362)
498 3d1l_A Putative NADP oxidoredu 89.4 0.17 5.9E-06 54.6 3.2 36 698-733 7-43 (266)
499 3gpi_A NAD-dependent epimerase 89.4 0.34 1.2E-05 52.5 5.6 65 955-1019 2-72 (286)
500 2b5w_A Glucose dehydrogenase; 89.4 0.28 9.5E-06 55.6 5.0 86 955-1046 172-273 (357)
No 1
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=2.1e-60 Score=542.27 Aligned_cols=270 Identities=28% Similarity=0.374 Sum_probs=246.9
Q ss_pred HhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccH
Q psy13054 850 LLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQ 928 (1128)
Q Consensus 850 ~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~ 928 (1128)
.++++++..+. .+++++++|+++ |+||||++.|+|+||||+++|+++||.|+|+||+++.+||||+++++|++.|++.
T Consensus 39 ~l~~ad~i~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~ 117 (334)
T 3kb6_A 39 ELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLK 117 (334)
T ss_dssp HHHHCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred HhcCCCEEEEeCCCCCCHHHHhcC-CCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccc
Confidence 34556655443 578999999997 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhh
Q psy13054 929 EGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLC 1008 (1128)
Q Consensus 929 ~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell 1008 (1128)
.+++.++++.|... ......+++|||+||||+|+||+++|+++++|||+|++||++.. ....+.++.+++++|++
T Consensus 118 ~~~~~~~~~~~~~~----~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~-~~~~~~~~~~~~l~ell 192 (334)
T 3kb6_A 118 RIEDRVKKLNFSQD----SEILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKR-EDLKEKGCVYTSLDELL 192 (334)
T ss_dssp HHHHHHHTTCCCCC----GGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHTTCEECCHHHHH
T ss_pred cccccccccccccc----cccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccc-hhhhhcCceecCHHHHH
Confidence 99999999998721 11234489999999999999999999999999999999987654 33445677889999999
Q ss_pred ccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCC------
Q psy13054 1009 AESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADH------ 1082 (1128)
Q Consensus 1009 ~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~------ 1082 (1128)
++||||++|||+|++|+||||++.|++||+|++|||+|||++|||+||++||++|+|+||+||||++||++.++
T Consensus 193 ~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~ 272 (334)
T 3kb6_A 193 KESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGK 272 (334)
T ss_dssp HHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTC
T ss_pred hhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred ---------ccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q psy13054 1083 ---------PLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMI 1125 (1128)
Q Consensus 1083 ---------pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~ 1125 (1128)
|||++|||++|||+||+|.++++++.+.+++||.+|++|++..
T Consensus 273 ~~~~~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~ 324 (334)
T 3kb6_A 273 ATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQ 324 (334)
T ss_dssp CCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGG
T ss_pred cccccccchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 6889999999999999999999999999999999999998753
No 2
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=7.5e-59 Score=530.28 Aligned_cols=281 Identities=28% Similarity=0.369 Sum_probs=257.2
Q ss_pred chHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHH
Q psy13054 844 GLETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIA 922 (1128)
Q Consensus 844 ~~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~ 922 (1128)
.+++.+.++++++.+.. .+++++++|++++|+||||++.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|+
T Consensus 62 ~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~ 141 (345)
T 4g2n_A 62 PSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLN 141 (345)
T ss_dssp HHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHH
Confidence 45677888888876655 47899999998647999999999999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc
Q psy13054 923 VSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV 1002 (1128)
Q Consensus 923 ~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~ 1002 (1128)
+.|++.++++.+++|+|.... .......+++||||||||+|+||+++|++|++|||+|++||++........ +++++
T Consensus 142 ~~R~~~~~~~~~r~g~W~~~~--~~~~~g~~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-g~~~~ 218 (345)
T 4g2n_A 142 ACRRGYEADRMVRSGSWPGWG--PTQLLGMGLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE-GAIYH 218 (345)
T ss_dssp HHHTHHHHHHHHHTTCCCCCC--TTTTCBCCCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT-TCEEC
T ss_pred HHhCHHHHHHHHHcCCCcccC--cccccccccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc-CCeEe
Confidence 999999999999999997210 001224589999999999999999999999999999999998765443222 77776
Q ss_pred -ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCC
Q psy13054 1003 -PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPAD 1081 (1128)
Q Consensus 1003 -~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~ 1081 (1128)
++++++++||+|++|+|++++|+++|+++.|++||+|++|||+|||++||++||+++|++|+|+||+||||++|| |.+
T Consensus 219 ~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~ 297 (345)
T 4g2n_A 219 DTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP-AID 297 (345)
T ss_dssp SSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCC
T ss_pred CCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 889
Q ss_pred CccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1082 HPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1082 ~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+|||++|||++|||+||+|.++++++.+.+++||.+|++|+++.|+|
T Consensus 298 ~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~~~~V 344 (345)
T 4g2n_A 298 PRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQSDVPDNLI 344 (345)
T ss_dssp TTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred chHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 99999999999999999999999999999999999999999999986
No 3
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=1.1e-58 Score=528.14 Aligned_cols=282 Identities=26% Similarity=0.355 Sum_probs=260.5
Q ss_pred CCCchHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHH
Q psy13054 841 GNIGLETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGL 919 (1128)
Q Consensus 841 ~~~~~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alal 919 (1128)
....+|+.+.++++++..+. .+++++++|+++ |+||||++.|+|+|+||+++|+++||.|+|+|++++.+||||++++
T Consensus 30 ~~~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l 108 (334)
T 2pi1_A 30 TDVSKVPENELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAM 108 (334)
T ss_dssp SCGGGSCHHHHHHCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHH
T ss_pred CCCcHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCccccccCHHHHHHCCeEEEECCCcCcHHHHHHHHHH
Confidence 34466788888999977665 678999999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCC
Q psy13054 920 AIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGA 999 (1128)
Q Consensus 920 iL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~ 999 (1128)
+|++.|++..+++.+++|+|.+.. .....+++|+||||||+|+||+++|++|++|||+|++||++..... .+.++
T Consensus 109 ~L~~~R~~~~~~~~~~~g~w~~~~----~~~~~~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~g~ 183 (334)
T 2pi1_A 109 ILTLVKRLKRIEDRVKKLNFSQDS----EILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDL-KEKGC 183 (334)
T ss_dssp HHHHHTTHHHHHHHHTTTCCCCCG----GGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HHTTC
T ss_pred HHHHHHhHHHHHHHHHcCCCcccc----CccceeccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhh-HhcCc
Confidence 999999999999999999997310 1134589999999999999999999999999999999997765442 25678
Q ss_pred cccChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCC-
Q psy13054 1000 QLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPL- 1078 (1128)
Q Consensus 1000 ~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl- 1078 (1128)
.++++++++++||+|++|+|+|++|+++|+++.|++||+|++|||+|||++||++||+++|++|+|+||+||||++||+
T Consensus 184 ~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~ 263 (334)
T 2pi1_A 184 VYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEIL 263 (334)
T ss_dssp EECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHH
T ss_pred eecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCc
Confidence 8889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred --------------CCCCccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1079 --------------PADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1079 --------------~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
|++||||++|||++|||+||+|.++++++.+.+++||.+|++|+++.|.|
T Consensus 264 ~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~V 327 (334)
T 2pi1_A 264 ILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKG 327 (334)
T ss_dssp HTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGG
T ss_pred cccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCCCCCceE
Confidence 67899999999999999999999999999999999999999999998865
No 4
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=1e-57 Score=519.45 Aligned_cols=279 Identities=29% Similarity=0.435 Sum_probs=258.1
Q ss_pred chHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHH
Q psy13054 844 GLETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIA 922 (1128)
Q Consensus 844 ~~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~ 922 (1128)
.+++.+.++++++.+.. .+++++++|+++ |+||||++.|+|+||||+++|+++||.|+|+|++++.+||||+++++|+
T Consensus 36 ~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~ 114 (330)
T 4e5n_A 36 REEILRRCRDAQAMMAFMPDRVDADFLQAC-PELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVG 114 (330)
T ss_dssp HHHHHHHHTTCSEEEECTTCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEeCCCCCCHHHHhhC-CCCcEEEECCCcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHH
Confidence 45566777777766553 568999999997 9999999999999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHHcCCCccccccccCC--cccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCC
Q psy13054 923 VSRRFQEGRKCITSGEWALKQTHIIGP--NIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGA 999 (1128)
Q Consensus 923 ~~R~i~~~~~~~~~g~w~~~~~~~~~~--~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~ 999 (1128)
+.|++..+++.+++|+|. .|.+ ...+++|+||||||+|+||+.+|++|++|||+|++||++..+.. ..+.|+
T Consensus 115 ~~R~~~~~~~~~~~g~w~-----~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~ 189 (330)
T 4e5n_A 115 LGRHLRAADAFVRSGKFR-----GWQPRFYGTGLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGL 189 (330)
T ss_dssp HHTTHHHHHHHHHTTCCC-----SCCSCCCCCCSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTE
T ss_pred HHhChHHHHHHHHhCCcc-----ccCccccCCccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCc
Confidence 999999999999999997 2332 23489999999999999999999999999999999998764443 456677
Q ss_pred cccChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCC---
Q psy13054 1000 QLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPE--- 1076 (1128)
Q Consensus 1000 ~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~E--- 1076 (1128)
.++++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|++||+++|++|+|+||+||||++|
T Consensus 190 ~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~ 269 (330)
T 4e5n_A 190 RQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWA 269 (330)
T ss_dssp EECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTT
T ss_pred eeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEeccccccccc
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----CCCCCCccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1077 ----PLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1077 ----Pl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
|+|.++|||++|||++|||+||+|.++++++.+.+++||.+|++|+++.|.|
T Consensus 270 ~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~v 325 (330)
T 4e5n_A 270 RADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGERPINAV 325 (330)
T ss_dssp CTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTSCCTTBS
T ss_pred ccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999999999999999999999999999999999999999999999998875
No 5
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=9.5e-58 Score=517.08 Aligned_cols=294 Identities=26% Similarity=0.334 Sum_probs=257.9
Q ss_pred hhhhhhh-cccCccccccCCcEEEEecCCCCchHHHHHhhccceeEEeecCCChhhhhcCCCCccEEEEccccCCcCChh
Q psy13054 814 EWALKQT-HIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLKVITTFSVGYDHLELH 892 (1128)
Q Consensus 814 ~~~~~~l-~~~~p~~~~l~~a~v~i~~~~~~~~e~~~~l~~~~~~~~~~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~ 892 (1128)
+++.+.+ ....|++ ++ ..+ ...++..+.++++++.+. ..++++++|+++ |+||||++.|+|+|++|++
T Consensus 16 ~~~~~~L~~~~~p~~------~~--~~~-~~~~~~~~~~~~ad~li~-~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~ 84 (324)
T 3hg7_A 16 AHYERLLKAAHLPHL------RI--LRA-DNQSDAEKLIGEAHILMA-EPARAKPLLAKA-NKLSWFQSTYAGVDVLLDA 84 (324)
T ss_dssp HHHHHHHHHSCCTTE------EE--EEC-SSHHHHHHHGGGCSEEEE-CHHHHGGGGGGC-TTCCEEEESSSCCGGGSCT
T ss_pred HHHHHHHhhccCCCe------EE--EeC-CChhHHHHHhCCCEEEEE-CCCCCHHHHhhC-CCceEEEECCCCCCccChH
Confidence 4556666 5566665 22 222 234567778888887653 445678899987 9999999999999999999
Q ss_pred hhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHH
Q psy13054 893 EIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETA 972 (1128)
Q Consensus 893 a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA 972 (1128)
++++ ||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.. ....+++|+||||||+|.||+++|
T Consensus 85 ~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~-------~~~~~l~g~tvGIIGlG~IG~~vA 156 (324)
T 3hg7_A 85 RCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQS-------HPYQGLKGRTLLILGTGSIGQHIA 156 (324)
T ss_dssp TSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC-------CCCCCSTTCEEEEECCSHHHHHHH
T ss_pred HHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcC-------CCCcccccceEEEEEECHHHHHHH
Confidence 8865 99999999999999999999999999999999999999999972 234589999999999999999999
Q ss_pred HHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccC
Q psy13054 973 KLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLD 1052 (1128)
Q Consensus 973 ~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVd 1052 (1128)
++|++|||+|++||++..............+++|++++||+|++|+|+|++|+++|+++.|++||+|++|||+|||++||
T Consensus 157 ~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vd 236 (324)
T 3hg7_A 157 HTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAIN 236 (324)
T ss_dssp HHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBC
T ss_pred HHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhC
Confidence 99999999999999776433322222345689999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1053 QEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1053 e~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
++||+++|++|+|+||+||||++||+|.++|||++|||++|||+||+|.+ +++.+.+++||.+|++|+++.|.|
T Consensus 237 e~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~nl~~~~~G~~~~~~V 310 (324)
T 3hg7_A 237 EGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DDVAQIFVRNYIRFIDGQPLDGKI 310 (324)
T ss_dssp HHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred HHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HHHHHHHHHHHHHHHcCCCCcceE
Confidence 99999999999999999999999999999999999999999999999987 589999999999999999999876
No 6
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=3.7e-57 Score=517.84 Aligned_cols=288 Identities=27% Similarity=0.414 Sum_probs=259.0
Q ss_pred CcEEEEecCCC-CchHHHHHhhccceeEEee---cCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCC
Q psy13054 832 GATVGIVGLGN-IGLETAKLLKAFKVSKILY---TSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHI 907 (1128)
Q Consensus 832 ~a~v~i~~~~~-~~~e~~~~l~~~~~~~~~~---~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~ 907 (1128)
++++.+..... ..+++.+.++++++++... .++++++|+++ |+||+|++.|+|+||||+++|+++||.|+|+|++
T Consensus 40 g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~-p~Lk~i~~~g~G~d~id~~~a~~~gI~V~n~~g~ 118 (351)
T 3jtm_A 40 GHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKA-KNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGS 118 (351)
T ss_dssp TCEEEEESCCSSTTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHC-SSCCEEEESSSCCTTBCHHHHHHTTCEEEECTTT
T ss_pred CCEEEEeCCCCCCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhC-CCCeEEEEeCeeecccCHHHHHhcCeeEEECCCc
Confidence 45555554332 3457788888888765432 45899999997 9999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeC
Q psy13054 908 SSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTS 987 (1128)
Q Consensus 908 ~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~ 987 (1128)
|+.+||||+++++|++.|++..+++.+++|+|.... ......+++|+||||||+|+||+.+|++|++|||+|++||+
T Consensus 119 ~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~---~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr 195 (351)
T 3jtm_A 119 NVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAG---IAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDR 195 (351)
T ss_dssp THHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHH---HHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECS
T ss_pred CchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCcccc---ccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCC
Confidence 999999999999999999999999999999997311 01123489999999999999999999999999999999997
Q ss_pred CCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCc
Q psy13054 988 RRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKI 1065 (1128)
Q Consensus 988 ~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i 1065 (1128)
+....+ ..+.|+..+ ++++++++||+|++|+|++++|+++|+++.|++||+|++|||+|||++||++||+++|++|+|
T Consensus 196 ~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i 275 (351)
T 3jtm_A 196 LQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHI 275 (351)
T ss_dssp SCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSE
T ss_pred CccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCc
Confidence 654443 556677776 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q psy13054 1066 GGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEP 1123 (1128)
Q Consensus 1066 ~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~ 1123 (1128)
+||+||||++||+|.++|||++|||++|||+||+|.+++.++.+.+.+||.+|++|++
T Consensus 276 ~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~ 333 (351)
T 3jtm_A 276 GGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGED 333 (351)
T ss_dssp EEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999999996
No 7
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=5.6e-57 Score=516.86 Aligned_cols=296 Identities=25% Similarity=0.324 Sum_probs=261.9
Q ss_pred cCCcEEEEecCCC-CchHHHHHhhccceeEEe--ecCCChhhhhcCCCCccEEEEccccC----CcCChhhhhhCCcEEE
Q psy13054 830 LKGATVGIVGLGN-IGLETAKLLKAFKVSKIL--YTSRNKVKTPKRTENLKVITTFSVGY----DHLELHEIKARGIRVG 902 (1128)
Q Consensus 830 l~~a~v~i~~~~~-~~~e~~~~l~~~~~~~~~--~~~i~~~~l~~~~~~LK~I~~~~aGv----d~idl~a~~~~GI~V~ 902 (1128)
++++++.+..... ..+++.+.++++++.++. .+++++++|+++ |+||+|++.|+|+ |+||+++|+++||.|+
T Consensus 24 l~~~~v~~~~~~~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~-~~Lk~I~~~g~G~~~~~d~id~~~a~~~gI~V~ 102 (352)
T 3gg9_A 24 LQDHEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRL-PKLKIISQTGRVSRDAGGHIDLEACTDKGVVVL 102 (352)
T ss_dssp GTTSEEEECCSCCCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTC-TTCCEEEESSCCCCSSSCSBCHHHHHHHTCEEE
T ss_pred hcCceEEEecCCCCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhC-CCCeEEEEeCcccCCccCcccHHHHHhCCeEEE
Confidence 3445555544322 345677888888876653 478999999997 9999999999999 9999999999999999
Q ss_pred EcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccc--cccC---CcccccCCCeEEEEEcChhhHHHHHHHhh
Q psy13054 903 SVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQT--HIIG---PNIMGLKGATVGIVGLGNIGLETAKLLKA 977 (1128)
Q Consensus 903 n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~--~~~~---~~~~~L~gktvGIIG~G~IG~~vA~~l~a 977 (1128)
|+||+ +.+||||+++++|++.|++..+++.+++|+|..... ..|. ....+++||||||||+|.||+++|++|++
T Consensus 103 n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~ 181 (352)
T 3gg9_A 103 EGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRA 181 (352)
T ss_dssp CCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHH
T ss_pred ECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCCCCEEEEEeECHHHHHHHHHHHh
Confidence 99999 999999999999999999999999999999974210 0111 23458999999999999999999999999
Q ss_pred CCCEEEEEeCCCCchhhhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHH
Q psy13054 978 FKVSKILYTSRRVKEEGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEAL 1056 (1128)
Q Consensus 978 fG~~Vi~~d~~~~~~~~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL 1056 (1128)
|||+|++||++.......+.|++++ ++++++++||+|++|+|++++|+++|+++.|++||+|++|||+|||++||++||
T Consensus 182 ~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL 261 (352)
T 3gg9_A 182 FGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGM 261 (352)
T ss_dssp TTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHH
T ss_pred CCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHH
Confidence 9999999997653333556788777 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1057 VEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1057 ~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+++|++|+|+||+||||++||+|.++|||++|||++|||+||+|.++++++.+.+++||.+|++|+|+ |.|
T Consensus 262 ~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~p~-~~V 332 (352)
T 3gg9_A 262 VTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQNILDILQGNVD-SVA 332 (352)
T ss_dssp HHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCT-TBS
T ss_pred HHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-ccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999875 543
No 8
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=5.9e-57 Score=517.45 Aligned_cols=265 Identities=23% Similarity=0.351 Sum_probs=241.4
Q ss_pred eecCCChhhhhcCCCCccEEEEc-cccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCC
Q psy13054 860 LYTSRNKVKTPKRTENLKVITTF-SVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGE 938 (1128)
Q Consensus 860 ~~~~i~~~~l~~~~~~LK~I~~~-~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~ 938 (1128)
..+++++++|+++ |+||+|++. |+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.+++|+
T Consensus 82 ~~~~i~~~~l~~~-p~Lk~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~ 160 (365)
T 4hy3_A 82 GQPPLSAETLARM-PALRSILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGT 160 (365)
T ss_dssp ECCCCCHHHHTTC-TTCCEEECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTC
T ss_pred eCCCCCHHHHhhC-CCCeEEEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCC
Confidence 4578999999997 999999975 88999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEec
Q psy13054 939 WALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 939 w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~l 1018 (1128)
|.... .......+++||||||||+|+||+.+|+++++|||+|++||++.......+.|+...++++++++||+|++|+
T Consensus 161 ~~w~~--~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~ 238 (365)
T 4hy3_A 161 ELWGG--EGNASARLIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVA 238 (365)
T ss_dssp CCCSS--SSTTSCCCSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECS
T ss_pred ccccc--cccccccccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcC
Confidence 54110 0012345899999999999999999999999999999999987543335567888889999999999999999
Q ss_pred CCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCC
Q psy13054 1019 ALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSS 1098 (1128)
Q Consensus 1019 Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag 1098 (1128)
|++++|+++|+++.|++||+|++|||+|||++||++||+++|++|+|+ ||||||++||+|.++|||++|||++|||+||
T Consensus 239 Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~ 317 (365)
T 4hy3_A 239 AVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAG 317 (365)
T ss_dssp CSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSS
T ss_pred cCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCcccc
Confidence 999999999999999999999999999999999999999999999998 8999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1099 ATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1099 ~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+|.++++++.+.+++||.+|++|+|+.+.|
T Consensus 318 ~t~e~~~~~~~~~~~ni~~~~~G~~~~~~v 347 (365)
T 4hy3_A 318 ALDSAFKKMGDMVLEDMDLMDRGLPPMRCK 347 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCCCSSE
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 999999999999999999999999988754
No 9
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=6.2e-57 Score=514.07 Aligned_cols=280 Identities=25% Similarity=0.310 Sum_probs=250.7
Q ss_pred CchHHHHHhhccceeEEe-ecCCChh-hhhcCC-CCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHH
Q psy13054 843 IGLETAKLLKAFKVSKIL-YTSRNKV-KTPKRT-ENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGL 919 (1128)
Q Consensus 843 ~~~e~~~~l~~~~~~~~~-~~~i~~~-~l~~~~-~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alal 919 (1128)
..+++.+.+++++++++. .++++++ +|++++ ++||+|++.|+|+|+||+++|+++||.|+|+|++++.+||||++++
T Consensus 35 ~~~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l 114 (343)
T 2yq5_A 35 LTSATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQ 114 (343)
T ss_dssp CSTTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHH
T ss_pred CCHHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHH
Confidence 345666677777766554 4789999 999862 3699999999999999999999999999999999999999999999
Q ss_pred HHHHHhccHHHHHHHH-cCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcC
Q psy13054 920 AIAVSRRFQEGRKCIT-SGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALG 998 (1128)
Q Consensus 920 iL~~~R~i~~~~~~~~-~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g 998 (1128)
+|++.|++..+++.++ +|+|... ......+++||||||||+|.||+.+|++|++|||+|++||++.... .+.+
T Consensus 115 ~L~~~R~~~~~~~~~~~~g~~~w~----~~~~~~~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~ 188 (343)
T 2yq5_A 115 AMYLLRKIGEFRYRMDHDHDFTWP----SNLISNEIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--FEPF 188 (343)
T ss_dssp HHHHHHTHHHHHHHHHHHCCCCCC----GGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--GTTT
T ss_pred HHHHHhchHHHHHHHHHcCCcccc----cCCCccccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--hhcc
Confidence 9999999999999999 9987521 0123458999999999999999999999999999999999876542 2334
Q ss_pred CcccChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCC-
Q psy13054 999 AQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEP- 1077 (1128)
Q Consensus 999 ~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EP- 1077 (1128)
+.++++++++++||+|++|+|+|++|+++|+++.|++||+|++|||+|||++||++||+++|++|+|+||+||||++||
T Consensus 189 ~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~ 268 (343)
T 2yq5_A 189 LTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESS 268 (343)
T ss_dssp CEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGG
T ss_pred ccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCC
Confidence 6677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CCCC-----------CccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1078 -LPAD-----------HPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1078 -l~~~-----------~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+|.+ +|||++|||++|||+||+|.++++++.+.+++||.+|++|+++.|+|
T Consensus 269 ~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni~~~l~g~~~~~~v 331 (343)
T 2yq5_A 269 YFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQLTIAKGGRPRSIV 331 (343)
T ss_dssp TTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred ccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHHHHHHcCCCCCceE
Confidence 5666 58999999999999999999999999999999999999999999876
No 10
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=1.2e-56 Score=521.01 Aligned_cols=277 Identities=26% Similarity=0.377 Sum_probs=247.5
Q ss_pred CchHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHH
Q psy13054 843 IGLETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAI 921 (1128)
Q Consensus 843 ~~~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL 921 (1128)
..+++.+.+++++++.+. .+++++++|+++ |+||+|+++|+|+||||+++|+++||.|+|+|++|+++||||+++++|
T Consensus 48 ~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L 126 (416)
T 3k5p_A 48 DKADLIKAISSAHIIGIRSRTQLTEEIFAAA-NRLIAVGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEII 126 (416)
T ss_dssp CHHHHHHHHTTCSEEEECSSCCBCHHHHHHC-TTCCEEEECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHccCCEEEEEcCCCCCCHHHHHhC-CCcEEEEECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHH
Confidence 456678888888876544 468999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCc-
Q psy13054 922 AVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQ- 1000 (1128)
Q Consensus 922 ~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~- 1000 (1128)
++.|++..+++.+++|+|.+. .....+++|||+||||+|+||+++|+++++|||+|++||+...... .+..
T Consensus 127 ~l~R~i~~~~~~~~~g~W~~~-----~~~~~el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~---~~~~~ 198 (416)
T 3k5p_A 127 MLMRRIFPRSVSAHAGGWEKT-----AIGSREVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY---GNVKP 198 (416)
T ss_dssp HHHTTHHHHHHHHHTTCCCCC-----CTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB---TTBEE
T ss_pred HHhcccHHHHHhhhccccccc-----CCCCccCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc---cCcEe
Confidence 999999999999999999831 2234589999999999999999999999999999999997643221 1233
Q ss_pred ccChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCC
Q psy13054 1001 LVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPA 1080 (1128)
Q Consensus 1001 ~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~ 1080 (1128)
..+++|++++||+|++|+|++++|+++|+++.|++||+|++|||+|||++||++||+++|++|+|+||+||||++||++.
T Consensus 199 ~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~ 278 (416)
T 3k5p_A 199 AASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASN 278 (416)
T ss_dssp CSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSST
T ss_pred cCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCc
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred C----CccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1081 D----HPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1081 ~----~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+ +|||++|||++|||+||+|.|++++++..+++||.+|+.|+...+.|
T Consensus 279 ~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~~~~~V 330 (416)
T 3k5p_A 279 GERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTVGAV 330 (416)
T ss_dssp TSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCCCTTBS
T ss_pred ccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCcee
Confidence 5 79999999999999999999999999999999999999888777654
No 11
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=4.4e-57 Score=512.30 Aligned_cols=258 Identities=27% Similarity=0.357 Sum_probs=237.2
Q ss_pred CCChhhh-hcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHH-HHHHHcCCCc
Q psy13054 863 SRNKVKT-PKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEG-RKCITSGEWA 940 (1128)
Q Consensus 863 ~i~~~~l-~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~-~~~~~~g~w~ 940 (1128)
++ +++| +++ |+||||++.|+|+|+||+++|+++||.|+|+||+++.+||||+++++|++.|++..+ .+.+++|.|.
T Consensus 50 ~~-~~~l~~~~-~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~ 127 (324)
T 3evt_A 50 LL-KTILARPT-NQLKFVQVISAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWA 127 (324)
T ss_dssp HH-HHHHHSTT-CCCCEEECSSSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSS
T ss_pred Ch-HHHHHhhC-CCceEEEECCccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcc
Confidence 45 7888 565 999999999999999999999999999999999999999999999999999999999 9999999997
Q ss_pred cccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCC
Q psy13054 941 LKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 941 ~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPl 1020 (1128)
.. ....+++||||||||+|.||+++|++|++|||+|++||++..............++++++++||+|++|+|+
T Consensus 128 ~~------~~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPl 201 (324)
T 3evt_A 128 LP------MTTSTLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPL 201 (324)
T ss_dssp CS------SCCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCC
T ss_pred cC------CCCccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCC
Confidence 31 134589999999999999999999999999999999997765443222223456899999999999999999
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCc
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSAT 1100 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t 1100 (1128)
|++|+++|+++.|+.||+|++|||+|||++||++||+++|++|+|+||+||||++||+|.++|||++|||++|||+||+|
T Consensus 202 t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t 281 (324)
T 3evt_A 202 TPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQI 281 (324)
T ss_dssp CGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCC
T ss_pred chHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CCCCCCC
Q psy13054 1101 KAVRDEKSSTSAENIIRGYKG-EPMIYEL 1128 (1128)
Q Consensus 1101 ~e~~~~~~~~~~~nl~~~l~G-~~l~~~v 1128 (1128)
.++.+++.+.+++||.+|++| +++.|.|
T Consensus 282 ~~~~~~~~~~~~~nl~~~l~~~~~~~n~V 310 (324)
T 3evt_A 282 AHFRATVFPIFAANFAQFVKDGTLVRNQV 310 (324)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSCCCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCceE
Confidence 999999999999999999965 4677765
No 12
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.1e-56 Score=506.80 Aligned_cols=275 Identities=28% Similarity=0.389 Sum_probs=224.2
Q ss_pred hHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHH
Q psy13054 845 LETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAV 923 (1128)
Q Consensus 845 ~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~ 923 (1128)
++..+.+++++++++. .+++++++|+++ |+||||++.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|++
T Consensus 63 ~~~~~~~~~~d~li~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~ 141 (340)
T 4dgs_A 63 PALEAALPSIRAVATGGGAGLSNEWMEKL-PSLGIIAINGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAV 141 (340)
T ss_dssp HHHHHHGGGCCEEEEETTTCBCHHHHHHC-SSCCEEEEESSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEEcCCCCCCHHHHhhC-CCCEEEEECCCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHH
Confidence 3455555677765543 468999999997 99999999999999999999999999999999999999999999999999
Q ss_pred HhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCc-cc
Q psy13054 924 SRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQ-LV 1002 (1128)
Q Consensus 924 ~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~-~~ 1002 (1128)
.|++.++++.+++|+|.+.. ..+...+++||||||||+|+||+++|+++++|||+|++||++.... .++. ..
T Consensus 142 ~R~~~~~~~~~~~g~W~~~~---~~~~~~~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----~~~~~~~ 214 (340)
T 4dgs_A 142 LRRVGDGDRLVREGRWAAGE---QLPLGHSPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG----VDWIAHQ 214 (340)
T ss_dssp HTTHHHHHHHHHTTCC---------CCCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT----SCCEECS
T ss_pred HhChHHHHHHHhcCCccccc---CcCccccccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc----cCceecC
Confidence 99999999999999997310 0122458999999999999999999999999999999998765542 2333 35
Q ss_pred ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCC
Q psy13054 1003 PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADH 1082 (1128)
Q Consensus 1003 ~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~ 1082 (1128)
+++|++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||++||++||+++|++|+|+||+||||++||++. +
T Consensus 215 sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~ 293 (340)
T 4dgs_A 215 SPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIR-S 293 (340)
T ss_dssp SHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCC-S
T ss_pred CHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCc-c
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999886 5
Q ss_pred ccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1083 PLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1083 pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
|||++|||++|||+||+|.++++++.+.+++||.+|++|+++.|.|
T Consensus 294 ~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~V 339 (340)
T 4dgs_A 294 EFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKAPNTV 339 (340)
T ss_dssp HHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCCTTBC
T ss_pred chhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 9999999999999999999999999999999999999999999876
No 13
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=1.1e-55 Score=514.82 Aligned_cols=277 Identities=25% Similarity=0.358 Sum_probs=243.1
Q ss_pred CchHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHH
Q psy13054 843 IGLETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAI 921 (1128)
Q Consensus 843 ~~~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL 921 (1128)
..+++.+.+++++++.+. .+++++++|+++ |+||+|+++|+|+||||+++|+++||.|+|+|++|+.+||||++++||
T Consensus 37 ~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L 115 (404)
T 1sc6_A 37 DDEQLKESIRDAHFIGLRSRTHLTEDVINAA-EKLVAIGAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELL 115 (404)
T ss_dssp CHHHHHHHTTSCSEEEECSSCCBCHHHHHHC-SSCCEEEECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCcEEEECCcccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHH
Confidence 345566777788866544 368999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc
Q psy13054 922 AVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL 1001 (1128)
Q Consensus 922 ~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~ 1001 (1128)
++.|+++++++.+++|+|.+. .....+++|||+||||+|+||+.+|+++++|||+|++||++..... .++..
T Consensus 116 ~~~R~i~~~~~~~~~g~W~~~-----~~~~~el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~---~~~~~ 187 (404)
T 1sc6_A 116 LLLRGVPEANAKAHRGVGNKL-----AAGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL---GNATQ 187 (404)
T ss_dssp HHHHTHHHHHHHHHHTCCC----------CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCC---TTCEE
T ss_pred HHHhChHHHHHHHHcCCcccc-----CCCccccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhcc---CCcee
Confidence 999999999999999999731 1234589999999999999999999999999999999997654321 13444
Q ss_pred c-ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCC
Q psy13054 1002 V-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPA 1080 (1128)
Q Consensus 1002 ~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~ 1080 (1128)
+ +++|++++||+|++|+|++++|+++|+++.|++||+|++|||+|||++||++||+++|++|+|+||+||||++||++.
T Consensus 188 ~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~ 267 (404)
T 1sc6_A 188 VQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATN 267 (404)
T ss_dssp CSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC--------
T ss_pred cCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCc
Confidence 4 899999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred ----CCccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1081 ----DHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1081 ----~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
++|||++|||++|||+||+|.|++++++..+++|+.+|+.|+++.|.|
T Consensus 268 ~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~~~~v 319 (404)
T 1sc6_A 268 SDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAV 319 (404)
T ss_dssp -CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCCTTBS
T ss_pred cccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCccee
Confidence 579999999999999999999999999999999999999998887764
No 14
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=2.5e-56 Score=508.63 Aligned_cols=265 Identities=26% Similarity=0.361 Sum_probs=228.6
Q ss_pred hcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchH
Q psy13054 77 KLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQ 156 (1128)
Q Consensus 77 ~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~ 156 (1128)
.++++|+++++..+++++++|+++ |+||+|+++|+|+||||+++|+++||.|+|+||+++++||||++++||+++|++.
T Consensus 39 ~l~~ad~i~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~ 117 (334)
T 3kb6_A 39 ELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLK 117 (334)
T ss_dssp HHHHCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred HhcCCCEEEEeCCCCCCHHHHhcC-CCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccc
Confidence 357899999988889999999987 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCccc
Q psy13054 157 QRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTD 236 (1128)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~ 236 (1128)
.+++.++++ +|+ .|. ...+..+.+||+||+|+|+
T Consensus 118 ~~~~~~~~~-~~~---------~~~------------------~~~~~~l~g~tvGIiG~G~------------------ 151 (334)
T 3kb6_A 118 RIEDRVKKL-NFS---------QDS------------------EILARELNRLTLGVIGTGR------------------ 151 (334)
T ss_dssp HHHHHHHTT-CCC---------CCG------------------GGCBCCGGGSEEEEECCSH------------------
T ss_pred ccccccccc-ccc---------ccc------------------ccccceecCcEEEEECcch------------------
Confidence 988766553 221 111 1223445678999999973
Q ss_pred cccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccceeecccccccccccccCCcccCHHH
Q psy13054 237 TNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLVPLDT 316 (1128)
Q Consensus 237 ~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~vsLde 316 (1128)
||+++++++++|++ ++++|+++.++...+.++++++|+|
T Consensus 152 ---------------IG~~va~~~~~fg~--------------------------~v~~~d~~~~~~~~~~~~~~~~l~e 190 (334)
T 3kb6_A 152 ---------------IGSRVAMYGLAFGM--------------------------KVLCYDVVKREDLKEKGCVYTSLDE 190 (334)
T ss_dssp ---------------HHHHHHHHHHHTTC--------------------------EEEEECSSCCHHHHHTTCEECCHHH
T ss_pred ---------------HHHHHHHhhcccCc--------------------------eeeecCCccchhhhhcCceecCHHH
Confidence 68888888887754 3456666555544556788999999
Q ss_pred HhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCCC----
Q psy13054 317 LCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADH---- 392 (1128)
Q Consensus 317 Ll~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~---- 392 (1128)
||++|||||+|||||++|+||||++.|++||+|++|||||||++|||+||++||++|+|+|||||||++||++.+|
T Consensus 191 ll~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~ 270 (334)
T 3kb6_A 191 LLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTE 270 (334)
T ss_dssp HHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGG
T ss_pred HHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred -----------CcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHHHHh
Q psy13054 393 -----------PLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEELFDK 435 (1128)
Q Consensus 393 -----------pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~~~~ 435 (1128)
|||++||| ++|||++++|.+ ...++|+.+|+++...+
T Consensus 271 ~~~~~~~~~~~~L~~~~nv------ilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~ 324 (334)
T 3kb6_A 271 GKATDKNLKILELACKDNV------IITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQ 324 (334)
T ss_dssp TCCCHHHHHHHHHHTSTTE------EECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGG
T ss_pred cccccccccchhhccCCCE------EECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 68899999 999999999975 45678899988876443
No 15
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=8.7e-55 Score=503.92 Aligned_cols=280 Identities=25% Similarity=0.379 Sum_probs=254.4
Q ss_pred hHHHHHhhccceeEEe---ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHH
Q psy13054 845 LETAKLLKAFKVSKIL---YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAI 921 (1128)
Q Consensus 845 ~e~~~~l~~~~~~~~~---~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL 921 (1128)
+++.+.++++++.+.. .+++++++|+++ |+||||++.++|+||||+++|+++||.|+|+|++++.+||||++++||
T Consensus 81 ~~l~~~l~~ad~li~~~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL 159 (393)
T 2nac_A 81 SVFERELVDADVVISQPFWPAYLTPERIAKA-KNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMIL 159 (393)
T ss_dssp SHHHHHHTTCSEEEEBTTBCCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCEEEEcCccCCCCCHHHHhhC-CCCcEEEEcCccccccCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHH
Confidence 3566777777765443 247899999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCc
Q psy13054 922 AVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQ 1000 (1128)
Q Consensus 922 ~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~ 1000 (1128)
++.|++..+++.+++|+|..... .....+++|+||||||+|+||+.+|++|++|||+|++||++..... ..+.|+.
T Consensus 160 ~~~R~~~~~~~~~~~g~W~~~~~---~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~ 236 (393)
T 2nac_A 160 SLVRNYLPSHEWARKGGWNIADC---VSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLT 236 (393)
T ss_dssp HHHTTHHHHHHHHHTTCCCHHHH---HTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCE
T ss_pred HHHhccHHHHHHHHcCCCCcccc---ccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCce
Confidence 99999999999999999973110 0123489999999999999999999999999999999997765443 4556776
Q ss_pred c-cChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCC
Q psy13054 1001 L-VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLP 1079 (1128)
Q Consensus 1001 ~-~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~ 1079 (1128)
. .++++++++||+|++|+|++++|+++|+++.|++||+|++|||+|||+++|++||+++|++|+|+||+||||++||++
T Consensus 237 ~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~ 316 (393)
T 2nac_A 237 WHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAP 316 (393)
T ss_dssp ECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCC
T ss_pred ecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCC
Confidence 5 489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1080 ADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1080 ~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
.++|||++|||++|||+||+|.++++++.+.+++||++|++|+++.|+|
T Consensus 317 ~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~~~~~ 365 (393)
T 2nac_A 317 KDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEY 365 (393)
T ss_dssp TTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCGGG
T ss_pred CCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCCccee
Confidence 9999999999999999999999999999999999999999999998864
No 16
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=6.3e-55 Score=497.75 Aligned_cols=276 Identities=22% Similarity=0.249 Sum_probs=249.2
Q ss_pred hHHHHHhhccceeEEe-ecCCChhhhhcCCCC--ccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHH
Q psy13054 845 LETAKLLKAFKVSKIL-YTSRNKVKTPKRTEN--LKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAI 921 (1128)
Q Consensus 845 ~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~--LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL 921 (1128)
+++.+.++++++.++. .+++++++|+++ |+ ||||++.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|
T Consensus 38 ~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L 116 (333)
T 1j4a_A 38 PETVALAKGADGVVVYQQLDYIAETLQAL-ADNGITKMSLRNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAA 116 (333)
T ss_dssp TTTGGGGTTCSEEEECCSSCBCHHHHHHH-HHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEEcCCCCCCHHHHHhc-cccCCeEEEECCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHH
Confidence 3555566666655543 367899999997 77 9999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc
Q psy13054 922 AVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL 1001 (1128)
Q Consensus 922 ~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~ 1001 (1128)
++.|++..+++.+++|.|... .....+++|+||||||+|+||+.+|+++++|||+|++||++..+. ..+ .+.+
T Consensus 117 ~~~R~~~~~~~~~~~g~w~~~-----~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~~~ 189 (333)
T 1j4a_A 117 RILRQDKAMDEKVARHDLRWA-----PTIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE-LEK-KGYY 189 (333)
T ss_dssp HHHHTHHHHHHHHHTTBCCCT-----TCCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-TTCB
T ss_pred HHHcCHHHHHHHHHcCCCccC-----CcccccCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh-HHh-hCee
Confidence 999999999999999999621 123348999999999999999999999999999999999876543 222 3556
Q ss_pred c-ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCC--C
Q psy13054 1002 V-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEP--L 1078 (1128)
Q Consensus 1002 ~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EP--l 1078 (1128)
+ ++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++|| +
T Consensus 190 ~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l 269 (333)
T 1j4a_A 190 VDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIF 269 (333)
T ss_dssp CSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTT
T ss_pred cCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCcc
Confidence 6 899999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCCC-----------ccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1079 PADH-----------PLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1079 ~~~~-----------pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
|.++ |||++|||++|||+||+|.++++++.+.+++||.+|++|+++.|.|
T Consensus 270 ~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 330 (333)
T 1j4a_A 270 NEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNLELVEGKEAETPV 330 (333)
T ss_dssp TSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBC
T ss_pred ccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCCCCccc
Confidence 6654 6999999999999999999999999999999999999999998875
No 17
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-55 Score=496.59 Aligned_cols=277 Identities=28% Similarity=0.406 Sum_probs=248.8
Q ss_pred CchHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHH
Q psy13054 843 IGLETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAI 921 (1128)
Q Consensus 843 ~~~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL 921 (1128)
..+++.+.++++++..+. .+++++++|+++ |+||||++.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|
T Consensus 57 ~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L 135 (335)
T 2g76_A 57 SKEELIAELQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIM 135 (335)
T ss_dssp CHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-SSCCEEEESSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCceEEEEcCCCCCCHHHHhhC-CCCcEEEECCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHH
Confidence 345677778888866543 357999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc
Q psy13054 922 AVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL 1001 (1128)
Q Consensus 922 ~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~ 1001 (1128)
++.|++..+++.+++|.|.+. .....+++|+||||||+|.||+.+|++|++|||+|++||++..+....+.|+..
T Consensus 136 ~~~R~~~~~~~~~~~g~W~~~-----~~~~~~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~ 210 (335)
T 2g76_A 136 CLARQIPQATASMKDGKWERK-----KFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQ 210 (335)
T ss_dssp HHHHTHHHHHHHHHTTCCCTG-----GGCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEE
T ss_pred HHHhchHHHHHHHHcCCCCcc-----CCCCcCCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCcee
Confidence 999999999999999999721 112348999999999999999999999999999999999876654355667777
Q ss_pred cChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCC
Q psy13054 1002 VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPAD 1081 (1128)
Q Consensus 1002 ~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~ 1081 (1128)
.++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||+.|| +.+
T Consensus 211 ~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP-~~~ 289 (335)
T 2g76_A 211 LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEP-PRD 289 (335)
T ss_dssp CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSS-CSC
T ss_pred CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCC-CCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999 678
Q ss_pred CccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy13054 1082 HPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIY 1126 (1128)
Q Consensus 1082 ~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~ 1126 (1128)
+|||++|||++|||+||+|.++++++.+.+++||.+|++|+++.|
T Consensus 290 ~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 290 RALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp CHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC-------
T ss_pred chHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999999999999999999999999999876
No 18
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=3.6e-55 Score=495.12 Aligned_cols=288 Identities=20% Similarity=0.247 Sum_probs=245.7
Q ss_pred hhhhhhhcccCccccccCCcEEEEecCCCCchHHHHHhhccceeEEeecCCChhhhhcCCCCccEEEEccccCCcC-C-h
Q psy13054 814 EWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLKVITTFSVGYDHL-E-L 891 (1128)
Q Consensus 814 ~~~~~~l~~~~p~~~~l~~a~v~i~~~~~~~~e~~~~l~~~~~~~~~~~~i~~~~l~~~~~~LK~I~~~~aGvd~i-d-l 891 (1128)
+++.+.+....|+++ + ..|... -.+++++.. ....++++|+. |+||||++.|+|+|++ | +
T Consensus 16 ~~~~~~l~~~~p~~~------~--~~~~~~------~~~~ad~~i--~~~~~~~~l~~--~~Lk~I~~~~aG~d~i~d~~ 77 (315)
T 3pp8_A 16 AWWVNALEKALPHAR------V--REWKVG------DNNPADYAL--VWQPPVEMLAG--RRLKAVFVLGAGVDAILSKL 77 (315)
T ss_dssp HHHHHHHHHHSTTEE------E--EECCTT------CCSCCSEEE--ESSCCHHHHTT--CCCSEEEESSSCCHHHHHHH
T ss_pred HHHHHHHHHHCCCCE------E--EecCCC------CccCcEEEE--ECCCCHHHhCC--CCceEEEECCEecccccchh
Confidence 455666776667652 2 222111 123444433 34568899986 9999999999999999 7 8
Q ss_pred hh---hhhCCcEEEEcCCCC-hhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChh
Q psy13054 892 HE---IKARGIRVGSVGHIS-SDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNI 967 (1128)
Q Consensus 892 ~a---~~~~GI~V~n~p~~~-a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~I 967 (1128)
++ +.++||.|+|+++++ +.+||||+++++|++.|++..+++.+++|.|.. ....+++|+||||||+|+|
T Consensus 78 ~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~-------~~~~~l~g~tvGIiG~G~I 150 (315)
T 3pp8_A 78 NAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKP-------LPEYTREEFSVGIMGAGVL 150 (315)
T ss_dssp HHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC-------CCCCCSTTCCEEEECCSHH
T ss_pred hhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCC-------CCCCCcCCCEEEEEeeCHH
Confidence 87 788999999999874 899999999999999999999999999999972 1345899999999999999
Q ss_pred hHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCC
Q psy13054 968 GLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 968 G~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
|+++|++|++|||+|++||++..............++++++++||+|++|+|+|++|+++|+++.|++||+|++|||+||
T Consensus 151 G~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aR 230 (315)
T 3pp8_A 151 GAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLAR 230 (315)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSC
T ss_pred HHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCC
Confidence 99999999999999999997665432111111125899999999999999999999999999999999999999999999
Q ss_pred CcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCC
Q psy13054 1048 GGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYE 1127 (1128)
Q Consensus 1048 G~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~ 1127 (1128)
|++||++||+++|++|+|+||+||||++||+|.++|||++|||++|||+||+|.+ +++.+.+++||.+|++|+++.|.
T Consensus 231 G~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~~G~~~~~~ 308 (315)
T 3pp8_A 231 GVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRP--AEAIDYISRTITQLEKGEPVTGQ 308 (315)
T ss_dssp GGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHHHTCCCCCB
T ss_pred ChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccHH--HHHHHHHHHHHHHHHcCCCCCce
Confidence 9999999999999999999999999999999999999999999999999999986 68999999999999999999987
Q ss_pred C
Q psy13054 1128 L 1128 (1128)
Q Consensus 1128 v 1128 (1128)
|
T Consensus 309 V 309 (315)
T 3pp8_A 309 V 309 (315)
T ss_dssp C
T ss_pred E
Confidence 6
No 19
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=1.1e-54 Score=495.87 Aligned_cols=304 Identities=25% Similarity=0.343 Sum_probs=253.9
Q ss_pred ccEEEEEeeccccccccccccccccchhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHh
Q psy13054 19 IEKLLLIVQNSHGISSFSRQGSRLLVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLD 98 (1128)
Q Consensus 19 ~~~ll~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~ 98 (1128)
|+|+|++. .++++.++.|+ +.+++.++.. ....+.+++.+.++++|+++++..+++++++|+
T Consensus 28 ~~kvlv~~---------------~~~~~~~~~l~--~~~~v~~~~~-~~~~~~~~l~~~~~~~d~li~~~~~~i~~~~l~ 89 (345)
T 4g2n_A 28 IQKAFLCR---------------RFTPAIEAELR--QRFDLEVNLE-DTVLTPSGIASRAHGAEVLFVTATEAITAEVIR 89 (345)
T ss_dssp CCEEEESS---------------CCCHHHHHHHH--HHSEEEECTT-CCCCCHHHHHHHTTTCSEEEECTTSCBCHHHHH
T ss_pred CCEEEEeC---------------CCCHHHHHHHH--ccCCEEEecC-CCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHH
Confidence 45777776 57777788776 4588887653 335678999999999999999877899999999
Q ss_pred ccCCCceEEEEcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCC
Q psy13054 99 RSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDT 178 (1128)
Q Consensus 99 ~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~ 178 (1128)
+++|+||+|+++|+||||||+++|+++||.|+|+||+++++||||++++||+++|++..+++.++++ .|.
T Consensus 90 ~~~~~Lk~I~~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g-~W~--------- 159 (345)
T 4g2n_A 90 KLQPGLKTIATLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSG-SWP--------- 159 (345)
T ss_dssp HTTTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-CCC---------
T ss_pred hhcCCceEEEEcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcC-CCc---------
Confidence 8657999999999999999999999999999999999999999999999999999999998877653 231
Q ss_pred CCcccccccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhh
Q psy13054 179 KFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINN 258 (1128)
Q Consensus 179 ~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~ 258 (1128)
.|.. ....|..+.||++||||+|. ||+.+++
T Consensus 160 ~~~~----------------~~~~g~~l~gktvGIIGlG~---------------------------------IG~~vA~ 190 (345)
T 4g2n_A 160 GWGP----------------TQLLGMGLTGRRLGIFGMGR---------------------------------IGRAIAT 190 (345)
T ss_dssp CCCT----------------TTTCBCCCTTCEEEEESCSH---------------------------------HHHHHHH
T ss_pred ccCc----------------ccccccccCCCEEEEEEeCh---------------------------------hHHHHHH
Confidence 1110 01123446678999999973 6888899
Q ss_pred hccCCceeeeeeCCCCCCCCccccccCCccccceeecccccccccccccCCccc-CHHHHhhcCCEEEEecCCCcccccc
Q psy13054 259 SLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQL 337 (1128)
Q Consensus 259 ~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~l 337 (1128)
++++|++. +++|+++....+...+++++ +|+|++++||||++|||+|++|+|+
T Consensus 191 ~l~~~G~~--------------------------V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~l 244 (345)
T 4g2n_A 191 RARGFGLA--------------------------IHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGF 244 (345)
T ss_dssp HHHTTTCE--------------------------EEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTC
T ss_pred HHHHCCCE--------------------------EEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHH
Confidence 88877543 34455443222222267777 9999999999999999999999999
Q ss_pred cCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCCh
Q psy13054 338 IGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADH 417 (1128)
Q Consensus 338 In~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~ 417 (1128)
||++.|++||||++|||+|||++|||+||++||++|+|+||+||||++|| +.++|||++||| ++|||++++|.
T Consensus 245 i~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nv------ilTPHia~~t~ 317 (345)
T 4g2n_A 245 LDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEP-AIDPRYRSLDNI------FLTPHIGSATH 317 (345)
T ss_dssp BCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTE------EECCSCTTCBH
T ss_pred hCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCCchHHhCCCE------EEcCccCcCCH
Confidence 99999999999999999999999999999999999999999999999999 899999999999 99999999998
Q ss_pred h------hhHHHHHHHHHHHH
Q psy13054 418 P------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 418 ~------~~~~~n~~~~~~~~ 432 (1128)
+ ...++|+.+|+++.
T Consensus 318 e~~~~~~~~~~~ni~~~l~g~ 338 (345)
T 4g2n_A 318 ETRDAMGWLLIQGIEALNQSD 338 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcCC
Confidence 5 44568888877654
No 20
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=1.7e-54 Score=493.92 Aligned_cols=277 Identities=26% Similarity=0.305 Sum_probs=250.0
Q ss_pred hHHHHHhhccceeEEe-ecCCChhhhhcCCCC--ccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHH
Q psy13054 845 LETAKLLKAFKVSKIL-YTSRNKVKTPKRTEN--LKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAI 921 (1128)
Q Consensus 845 ~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~--LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL 921 (1128)
++..+.++++++..+. .+++++++|+++ |+ ||||++.|+|+|+||+++|+++||.|+|+|++++.+||||++++||
T Consensus 37 ~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L 115 (331)
T 1xdw_A 37 KETAEMAAGFDAVILRGNCFANKQNLDIY-KKLGVKYILTRTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAM 115 (331)
T ss_dssp HHHHHTTTTCSEEEECTTCCBCHHHHHHH-HHHTCCEEEESSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEeCCCCCCHHHHhhC-cccCceEEEEccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHH
Confidence 5667777777765544 368999999997 87 9999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc
Q psy13054 922 AVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL 1001 (1128)
Q Consensus 922 ~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~ 1001 (1128)
++.|++..+++.+++|.|... ......++.|+||||||+|.||+.+|+++++|||+|++||++..+. .. ..+.+
T Consensus 116 ~~~R~~~~~~~~~~~g~w~~~----~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~ 189 (331)
T 1xdw_A 116 MLLRHTAYTTSRTAKKNFKVD----AFMFSKEVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG-IE-DYCTQ 189 (331)
T ss_dssp HHHTTHHHHHHHHTTTCCCCC----STTCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS-CT-TTCEE
T ss_pred HHHhCHHHHHHHHHcCCCccc----cCcCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH-HH-hcccc
Confidence 999999999999999999610 0122348999999999999999999999999999999999876543 22 23556
Q ss_pred cChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCC--C
Q psy13054 1002 VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPL--P 1079 (1128)
Q Consensus 1002 ~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl--~ 1079 (1128)
.++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|++||+++|++|+|+||+||||++||+ |
T Consensus 190 ~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~ 269 (331)
T 1xdw_A 190 VSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFG 269 (331)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTT
T ss_pred CCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999994 4
Q ss_pred CC-------C----ccccC-CCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1080 AD-------H----PLVQL-DNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1080 ~~-------~----pL~~~-pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
.+ + |||++ |||++|||+||+|.++++++.+.+++||.+|++|+++.|.|
T Consensus 270 ~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 330 (331)
T 1xdw_A 270 KDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLKDLAETGDCPNKI 330 (331)
T ss_dssp CCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHSCCTTBC
T ss_pred ccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 33 3 79999 99999999999999999999999999999999999998875
No 21
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=2.9e-54 Score=497.31 Aligned_cols=275 Identities=25% Similarity=0.384 Sum_probs=250.4
Q ss_pred chHHHHHhhccceeEEee---cCCChhhhhcCCCCccEEEEccccCCcCChhhhhhC--CcEEEEcCCCChhHHHHHHHH
Q psy13054 844 GLETAKLLKAFKVSKILY---TSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKAR--GIRVGSVGHISSDTVAEYNIG 918 (1128)
Q Consensus 844 ~~e~~~~l~~~~~~~~~~---~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~--GI~V~n~p~~~a~sVAE~ala 918 (1128)
.+++.+.++++++.+... +++++++|+++ |+||||++.++|+|+||+++|+++ ||.|+|+|++++.+||||+++
T Consensus 51 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~ 129 (364)
T 2j6i_A 51 NSVLDQHIPDADIIITTPFHPAYITKERIDKA-KKLKLVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVM 129 (364)
T ss_dssp TSHHHHHGGGCSEEEECTTSCCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHH
T ss_pred HHHHHHHhhCCeEEEecCcCCCCCCHHHHhhC-CCCeEEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHH
Confidence 356777788888655432 35899999997 999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCE-EEEEeCCCCchh-hhh
Q psy13054 919 LAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVS-KILYTSRRVKEE-GTA 996 (1128)
Q Consensus 919 liL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~-Vi~~d~~~~~~~-~~~ 996 (1128)
+||++.|++..+++.+++|.|.... ......+++|+||||||+|+||+++|++|++|||+ |++||++..... ..+
T Consensus 130 ~~L~~~R~~~~~~~~~~~g~W~~~~---~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~ 206 (364)
T 2j6i_A 130 TMLVLVRNFVPAHEQIINHDWEVAA---IAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEK 206 (364)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCCHHH---HHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHH
T ss_pred HHHHHHhChHHHHHHHHhCCCCcCc---ccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHh
Confidence 9999999999999999999997210 01123489999999999999999999999999997 999997664444 445
Q ss_pred cCCccc-ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCC
Q psy13054 997 LGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIP 1075 (1128)
Q Consensus 997 ~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~ 1075 (1128)
.|+..+ ++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|++||+++|++|+|+||+||||++
T Consensus 207 ~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~ 286 (364)
T 2j6i_A 207 VGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFP 286 (364)
T ss_dssp TTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSS
T ss_pred cCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCC
Confidence 676655 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccC--C---CeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Q psy13054 1076 EPLPADHPLVQL--D---NCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGE 1122 (1128)
Q Consensus 1076 EPl~~~~pL~~~--p---NvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~ 1122 (1128)
||+|.++|||.+ | ||++|||+||+|.++..++.+.+++||.+|++|+
T Consensus 287 EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~ 338 (364)
T 2j6i_A 287 QPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILESFFTGK 338 (364)
T ss_dssp SSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999 9 9999999999999999999999999999999998
No 22
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=7.9e-55 Score=496.78 Aligned_cols=276 Identities=26% Similarity=0.352 Sum_probs=245.8
Q ss_pred HHHHHhhccceeEEe-ecCCChhhhhcCCCC--ccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHH
Q psy13054 846 ETAKLLKAFKVSKIL-YTSRNKVKTPKRTEN--LKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIA 922 (1128)
Q Consensus 846 e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~--LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~ 922 (1128)
++.+.++++++.++. .+++++++|+++ |+ ||||++.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|+
T Consensus 37 ~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~ 115 (333)
T 1dxy_A 37 NTVEWAKGFDGINSLQTTPYAAGVFEKM-HAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLY 115 (333)
T ss_dssp TGGGGGTTCSEEEECCSSCBCHHHHHHH-HHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEcCCCCCCHHHHHhC-cccCceEEEEcCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHH
Confidence 444445556654433 357899999997 77 99999999999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc
Q psy13054 923 VSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV 1002 (1128)
Q Consensus 923 ~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~ 1002 (1128)
+.|++..+++.+++|.|... ......+++|+||||||+|+||+.+|+++++|||+|++||++.... .. ..+.+.
T Consensus 116 ~~R~~~~~~~~~~~g~w~~~----~~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~ 189 (333)
T 1dxy_A 116 LLRNMGKVQAQLQAGDYEKA----GTFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG-DH-PDFDYV 189 (333)
T ss_dssp HHTTHHHHHHHHHTTCHHHH----TCCCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS-CC-TTCEEC
T ss_pred HhhhHHHHHHHHHcCCcccc----cCCCccCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh-hH-hccccC
Confidence 99999999999999998510 0123358999999999999999999999999999999999876543 22 235567
Q ss_pred ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCC--CC
Q psy13054 1003 PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPL--PA 1080 (1128)
Q Consensus 1003 ~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl--~~ 1080 (1128)
++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||+ |.
T Consensus 190 ~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~ 269 (333)
T 1dxy_A 190 SLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLN 269 (333)
T ss_dssp CHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHH
T ss_pred CHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999993 21
Q ss_pred --------C---CccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1081 --------D---HPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1081 --------~---~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+ +|||++|||++|||+||+|.++++++.+.+++||.+|++|+++.|.|
T Consensus 270 ~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v 328 (333)
T 1dxy_A 270 LAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDFLTKGETSTEV 328 (333)
T ss_dssp HHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHHSCCTTEE
T ss_pred cccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHcCCCCCcee
Confidence 2 58999999999999999999999999999999999999999988764
No 23
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=9.2e-54 Score=482.97 Aligned_cols=271 Identities=36% Similarity=0.558 Sum_probs=248.8
Q ss_pred hHHHHHhhccceeEEee-cCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHH
Q psy13054 845 LETAKLLKAFKVSKILY-TSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAV 923 (1128)
Q Consensus 845 ~e~~~~l~~~~~~~~~~-~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~ 923 (1128)
+++.+.++++++..+.. +++++++|+++ |+||||++.|+|+|+||+++|+++||.|+|+||+++.+||||+++++|++
T Consensus 36 ~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~ 114 (307)
T 1wwk_A 36 DRLVELVKDVEAIIVRSKPKVTRRVIESA-PKLKVIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSV 114 (307)
T ss_dssp HHHHHHSTTCSEEEESSCSCBCHHHHTTC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCeEEEECCccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHH
Confidence 44556666666555433 36899999997 99999999999999999999999999999999999999999999999999
Q ss_pred HhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccC
Q psy13054 924 SRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVP 1003 (1128)
Q Consensus 924 ~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~ 1003 (1128)
.|++..+++.+++|.|.+. .....++.|+||||||+|+||+.+|+++++|||+|++||++..+....+.|+...+
T Consensus 115 ~R~~~~~~~~~~~g~w~~~-----~~~~~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~ 189 (307)
T 1wwk_A 115 ARKIAFADRKMREGVWAKK-----EAMGIELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFVD 189 (307)
T ss_dssp HTTHHHHHHHHTTTCCCTT-----TCCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEECC
T ss_pred HhCHHHHHHHHHcCCCCcc-----CcCCcccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCccccC
Confidence 9999999999999999721 12335899999999999999999999999999999999987765435566777789
Q ss_pred hHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCc
Q psy13054 1004 LDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHP 1083 (1128)
Q Consensus 1004 l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~p 1083 (1128)
+++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||++||+|.++|
T Consensus 190 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~ 269 (307)
T 1wwk_A 190 LETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHP 269 (307)
T ss_dssp HHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCG
T ss_pred HHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcC
Q psy13054 1084 LVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKG 1121 (1128)
Q Consensus 1084 L~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G 1121 (1128)
||++||+++|||+|++|.++.+++.+.+++||.+|++|
T Consensus 270 L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 270 LTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp GGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999986
No 24
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.1e-53 Score=481.35 Aligned_cols=273 Identities=27% Similarity=0.429 Sum_probs=251.6
Q ss_pred chHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHH
Q psy13054 844 GLETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIA 922 (1128)
Q Consensus 844 ~~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~ 922 (1128)
.+++.+.++++++..+. .+++++++++++ |+||||++.|+|+|++|+++|+++||.|+|+||+++.+||||+++++|+
T Consensus 37 ~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~ 115 (313)
T 2ekl_A 37 KEELLNIIGNYDIIVVRSRTKVTKDVIEKG-KKLKIIARAGIGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIA 115 (313)
T ss_dssp HHHHHHHGGGCSEEEECSSSCBCHHHHHHC-TTCCEEEECSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEEcCCCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHH
Confidence 34566677777765543 357899999997 9999999999999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc
Q psy13054 923 VSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV 1002 (1128)
Q Consensus 923 ~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~ 1002 (1128)
+.|++..+++.+++|.|. .....++.|+||||||+|+||+.+|+++++|||+|++||++..+....+.|+...
T Consensus 116 ~~R~~~~~~~~~~~g~w~-------~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~ 188 (313)
T 2ekl_A 116 AARKMYTSMALAKSGIFK-------KIEGLELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAKAV 188 (313)
T ss_dssp HHHTHHHHHHHHHTTCCC-------CCCCCCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEEC
T ss_pred HHhCHHHHHHHHHcCCCC-------CCCCCCCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCceec
Confidence 999999999999999996 1233589999999999999999999999999999999998776544455677777
Q ss_pred ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCC
Q psy13054 1003 PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADH 1082 (1128)
Q Consensus 1003 ~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~ 1082 (1128)
++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|.++|++|+|+||+||||++||++ ++
T Consensus 189 ~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~-~~ 267 (313)
T 2ekl_A 189 SLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPK-EE 267 (313)
T ss_dssp CHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCC-SH
T ss_pred CHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCC-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 66
Q ss_pred ---ccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q psy13054 1083 ---PLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMI 1125 (1128)
Q Consensus 1083 ---pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~ 1125 (1128)
|||++|||++|||+|++|.++.+++.+.+++||.+|++|+|+.
T Consensus 268 ~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l~ 313 (313)
T 2ekl_A 268 WELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAMKELGMI 313 (313)
T ss_dssp HHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccchHhhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999999999873
No 25
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=6.1e-53 Score=476.96 Aligned_cols=276 Identities=33% Similarity=0.477 Sum_probs=250.1
Q ss_pred chHHHHHhhccceeEEee-cCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHH
Q psy13054 844 GLETAKLLKAFKVSKILY-TSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIA 922 (1128)
Q Consensus 844 ~~e~~~~l~~~~~~~~~~-~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~ 922 (1128)
.+++.+.++++++..... +++++++|+++ |+||||++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||+
T Consensus 34 ~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~ 112 (311)
T 2cuk_A 34 KAELLKRVEGAVGLIPTVEDRIDAEVMDRA-KGLKVIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLA 112 (311)
T ss_dssp HHHHHHHHTTCSEEECCTTSCBCHHHHHHS-TTCCEEECSSSCCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCcCccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHH
Confidence 345666677777554332 47899999997 9999999999999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc
Q psy13054 923 VSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV 1002 (1128)
Q Consensus 923 ~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~ 1002 (1128)
+.|++..+++.+++|.|.... .......++.|+||||||+|+||+.+|+++++|||+|++||++..+.. +...
T Consensus 113 ~~R~~~~~~~~~~~g~w~~~~--~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----~~~~ 185 (311)
T 2cuk_A 113 VARRVVEGAAYARDGLWKAWH--PELLLGLDLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-----YPFL 185 (311)
T ss_dssp HHTTHHHHHHHHHTTCCCCCC--TTTTCBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----SCBC
T ss_pred HHcChHHHHHHHHcCCCCccc--cccccCcCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-----cccC
Confidence 999999999999999996200 001123489999999999999999999999999999999997665432 3456
Q ss_pred ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCC
Q psy13054 1003 PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADH 1082 (1128)
Q Consensus 1003 ~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~ 1082 (1128)
++++++++||+|++|+|++++|+++|+++.|+.||+|+++||+|||+++|+++|.++|+ |+|+||+||||++||++.++
T Consensus 186 ~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~ 264 (311)
T 2cuk_A 186 SLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGH 264 (311)
T ss_dssp CHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTS
T ss_pred CHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred ccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1083 PLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1083 pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
|||++||+++|||+|++|.++++++.+.+++||.+|++|+++.|.|
T Consensus 265 ~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 310 (311)
T 2cuk_A 265 PLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPV 310 (311)
T ss_dssp GGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBC
T ss_pred hhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999999999999999999999999999999999999999998875
No 26
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.2e-52 Score=476.56 Aligned_cols=277 Identities=28% Similarity=0.411 Sum_probs=251.5
Q ss_pred hHHHHHhhccceeEEee-cCCChhhhhcCCCC-ccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHH
Q psy13054 845 LETAKLLKAFKVSKILY-TSRNKVKTPKRTEN-LKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIA 922 (1128)
Q Consensus 845 ~e~~~~l~~~~~~~~~~-~~i~~~~l~~~~~~-LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~ 922 (1128)
+++.+.++++++..... +++++++|+++ |+ ||||++.|+|+|+||+++|+++||.|+|+||+++.+||||+++++|+
T Consensus 36 ~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~ 114 (320)
T 1gdh_A 36 DEMIETAKSVDALLITLNEKCRKEVIDRI-PENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLG 114 (320)
T ss_dssp HHHHHHHTTCSEEEEETTSCBCHHHHHHS-CTTCCEEEEESSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEECCCCCCCHHHHHhC-CccceEEEECCcccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 56667777777665543 57999999997 88 99999999999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeC-CCCchhhhhcCCcc
Q psy13054 923 VSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTS-RRVKEEGTALGAQL 1001 (1128)
Q Consensus 923 ~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~-~~~~~~~~~~g~~~ 1001 (1128)
+.|++..+++.+++|.|... ........++.|+||||||+|+||+.+|+++++|||+|++||+ +.......+.|+..
T Consensus 115 ~~R~~~~~~~~~~~g~w~~~--~~~~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~ 192 (320)
T 1gdh_A 115 SARRAGEGEKMIRTRSWPGW--EPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATF 192 (320)
T ss_dssp HHTTHHHHHHHHHTTCCCCC--CTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEE
T ss_pred HHccHHHHHHHHHcCCCCcc--ccccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEE
Confidence 99999999999999999620 0001123489999999999999999999999999999999998 66553344567777
Q ss_pred c-ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCC
Q psy13054 1002 V-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPA 1080 (1128)
Q Consensus 1002 ~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~ 1080 (1128)
+ ++++++++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|.++|++|+|+||+||||+.|| +.
T Consensus 193 ~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~ 271 (320)
T 1gdh_A 193 HDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NI 271 (320)
T ss_dssp CSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SC
T ss_pred cCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCC-CC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred CCccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy13054 1081 DHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIY 1126 (1128)
Q Consensus 1081 ~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~ 1126 (1128)
++|||++|||++|||++++|.++++++.+.+ +||.+|++|+++..
T Consensus 272 ~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~~~ 316 (320)
T 1gdh_A 272 NEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDALFGGADMS 316 (320)
T ss_dssp CTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTTSCCT
T ss_pred CChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCCCCcc
Confidence 9999999999999999999999999999999 99999999998754
No 27
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=4.2e-52 Score=475.94 Aligned_cols=273 Identities=27% Similarity=0.391 Sum_probs=244.1
Q ss_pred hccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHH
Q psy13054 852 KAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEG 930 (1128)
Q Consensus 852 ~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~ 930 (1128)
.+++...+. ..++++++|+++ |+||||++.++|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+
T Consensus 62 ~~~~~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~ 140 (347)
T 1mx3_A 62 NEAVGALMYHTITLTREDLEKF-KALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWL 140 (347)
T ss_dssp HHEEEEEECSSSCBCHHHHTTC-SSCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cCCeEEEEeCCCCCCHHHHhhC-CCCCEEEEcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 455543333 457999999997 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCccccc--cccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc-ChHhh
Q psy13054 931 RKCITSGEWALKQT--HIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV-PLDTL 1007 (1128)
Q Consensus 931 ~~~~~~g~w~~~~~--~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~-~l~el 1007 (1128)
++.+++|.|..... ..+.....+++|+||||||+|+||+.+|++|++|||+|++||++..+......|+..+ +++++
T Consensus 141 ~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~el 220 (347)
T 1mx3_A 141 HQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDL 220 (347)
T ss_dssp HHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHH
T ss_pred HHHHHcCCcccccccccccccCccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHH
Confidence 99999999952100 0000112479999999999999999999999999999999997765433445576654 89999
Q ss_pred hccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCC-CCCcccc
Q psy13054 1008 CAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLP-ADHPLVQ 1086 (1128)
Q Consensus 1008 l~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~-~~~pL~~ 1086 (1128)
+++||+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+||||+.||++ .++|||.
T Consensus 221 l~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~ 300 (347)
T 1mx3_A 221 LFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKD 300 (347)
T ss_dssp HHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTT
T ss_pred HhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987 4799999
Q ss_pred CCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q psy13054 1087 LDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMI 1125 (1128)
Q Consensus 1087 ~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~ 1125 (1128)
+|||++|||+|++|.++.+++.+.+++||.+|++|+++.
T Consensus 301 ~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~ 339 (347)
T 1mx3_A 301 APNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIPD 339 (347)
T ss_dssp CSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHHSCTTT
T ss_pred CCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 999999999999999999999999999999999998654
No 28
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=6.9e-52 Score=481.02 Aligned_cols=289 Identities=21% Similarity=0.301 Sum_probs=236.3
Q ss_pred cchhhhhhhhccCCc-eEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHH
Q psy13054 43 LVPESLSKLRFNSRF-DIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDE 121 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~-~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~a 121 (1128)
+.++.++.++. ..| ++.+++. ..+.+++.+.++++|++++++.+++++++|+++ |+||+|+++|+|+||||+++
T Consensus 24 i~~~~~~~l~~-~g~~~v~~~~~---~~~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G~d~IDl~~ 98 (416)
T 3k5p_A 24 ISQTAVEYFKS-SGYTNVTHLPK---ALDKADLIKAISSAHIIGIRSRTQLTEEIFAAA-NRLIAVGCFSVGTNQVELKA 98 (416)
T ss_dssp CCHHHHHHHHH-TTCCCEEECSS---CCCHHHHHHHHTTCSEEEECSSCCBCHHHHHHC-TTCCEEEECSSCCTTBCHHH
T ss_pred CCHHHHHHHHH-CCCcEEEECCC---CCCHHHHHHHccCCEEEEEcCCCCCCHHHHHhC-CCcEEEEECccccCccCHHH
Confidence 55566666652 345 7777653 367899999999999998888789999999986 89999999999999999999
Q ss_pred HHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccc
Q psy13054 122 IKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEI 201 (1128)
Q Consensus 122 a~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 201 (1128)
|+++||.|+|+|++|+++||||++++||+++|+++.++++++++ .|... ..
T Consensus 99 a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g-------------~W~~~----------------~~ 149 (416)
T 3k5p_A 99 ARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAG-------------GWEKT----------------AI 149 (416)
T ss_dssp HHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-------------CCCCC----------------CT
T ss_pred HHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcc-------------ccccc----------------CC
Confidence 99999999999999999999999999999999999998877653 33211 01
Q ss_pred cccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccc
Q psy13054 202 CQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPK 281 (1128)
Q Consensus 202 ~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~ 281 (1128)
.+.++.||++||||+|. ||+.+++++++|++.
T Consensus 150 ~~~el~gktvGIIGlG~---------------------------------IG~~vA~~l~~~G~~--------------- 181 (416)
T 3k5p_A 150 GSREVRGKTLGIVGYGN---------------------------------IGSQVGNLAESLGMT--------------- 181 (416)
T ss_dssp TCCCSTTCEEEEECCSH---------------------------------HHHHHHHHHHHTTCE---------------
T ss_pred CCccCCCCEEEEEeeCH---------------------------------HHHHHHHHHHHCCCE---------------
Confidence 12345678999999973 678888888877553
Q ss_pred cccCCccccceeecccccccccccccCC-cccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCc
Q psy13054 282 WRMGSKTDTNHYFGYNWFERSNGTALGA-QLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL 360 (1128)
Q Consensus 282 ~~~g~~~~~~~~~g~~~~~~~~~~~~g~-~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~l 360 (1128)
+++|++..+.. ..+. ...+|+|++++||||++|||+|++|+||||++.|++||||++|||+|||++
T Consensus 182 -----------V~~yd~~~~~~--~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~v 248 (416)
T 3k5p_A 182 -----------VRYYDTSDKLQ--YGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSD 248 (416)
T ss_dssp -----------EEEECTTCCCC--BTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTS
T ss_pred -----------EEEECCcchhc--ccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChh
Confidence 34444332211 1122 345899999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCeeEEEEecCCCCCCCCC----CCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHH
Q psy13054 361 LDQEALVEFLKDKKIGGAGLDVMIPEPLPAD----HPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFE 430 (1128)
Q Consensus 361 VDe~AL~~AL~sG~IagAaLDVfe~EPl~~~----~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~ 430 (1128)
||++||++||++|+|+||+||||++||++.+ +|||++||| ++|||++++|.+ ..+.+|+.+|++
T Consensus 249 vd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nv------ilTPHig~~T~ea~~~~~~~~~~nl~~~l~ 322 (416)
T 3k5p_A 249 VDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENV------ILTPHIGGSTEEAQERIGTEVTRKLVEYSD 322 (416)
T ss_dssp BCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTE------EECCSCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCE------EECCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998775 799999999 999999999986 456789999887
Q ss_pred HH
Q psy13054 431 EL 432 (1128)
Q Consensus 431 ~~ 432 (1128)
+.
T Consensus 323 ~g 324 (416)
T 3k5p_A 323 VG 324 (416)
T ss_dssp HC
T ss_pred hC
Confidence 65
No 29
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=2.1e-52 Score=475.87 Aligned_cols=296 Identities=21% Similarity=0.317 Sum_probs=250.0
Q ss_pred ccchhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHH
Q psy13054 42 LLVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDE 121 (1128)
Q Consensus 42 ~l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~a 121 (1128)
.+.++.++.|+ ..+++.+++. ....+.+++.+.++++|+++++..+++++++|+++ |+||+|+++|+||||||+++
T Consensus 10 ~~~~~~~~~l~--~~~~v~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~id~~~ 85 (330)
T 4e5n_A 10 RVHEEILQLLA--PHCELITNQT-DSTLTREEILRRCRDAQAMMAFMPDRVDADFLQAC-PELRVIGCALKGFDNFDVDA 85 (330)
T ss_dssp CCCHHHHHHHT--TTCEEECCCS-SSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHH
T ss_pred CCCHHHHHHHH--hCCeEEEecC-CCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhC-CCCcEEEECCCcccccCHHH
Confidence 56777777776 5678876543 33457899999999999999977789999999987 89999999999999999999
Q ss_pred HHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccc
Q psy13054 122 IKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEI 201 (1128)
Q Consensus 122 a~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 201 (1128)
|+++||.|+|+||+++++||||++++||+++|++..+++.++++ .| ..|.. ..
T Consensus 86 ~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g-~w---------~~~~~-----------------~~ 138 (330)
T 4e5n_A 86 CTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSG-KF---------RGWQP-----------------RF 138 (330)
T ss_dssp HHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-CC---------CSCCS-----------------CC
T ss_pred HHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhC-Cc---------cccCc-----------------cc
Confidence 99999999999999999999999999999999999998877653 23 12221 01
Q ss_pred cccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccc
Q psy13054 202 CQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPK 281 (1128)
Q Consensus 202 ~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~ 281 (1128)
.+..+.||++||||+|. ||+.++++++++++.
T Consensus 139 ~~~~l~g~tvGIIG~G~---------------------------------IG~~vA~~l~~~G~~--------------- 170 (330)
T 4e5n_A 139 YGTGLDNATVGFLGMGA---------------------------------IGLAMADRLQGWGAT--------------- 170 (330)
T ss_dssp CCCCSTTCEEEEECCSH---------------------------------HHHHHHHHTTTSCCE---------------
T ss_pred cCCccCCCEEEEEeeCH---------------------------------HHHHHHHHHHHCCCE---------------
Confidence 12345678999999973 688889988877543
Q ss_pred cccCCccccceeecccccc-c-ccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCC
Q psy13054 282 WRMGSKTDTNHYFGYNWFE-R-SNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGG 359 (1128)
Q Consensus 282 ~~~g~~~~~~~~~g~~~~~-~-~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~ 359 (1128)
+++|+++. + +.+.+.|+++++++|++++||+|++|||+|++|+|+||++.|++||+|++|||+|||+
T Consensus 171 -----------V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~ 239 (330)
T 4e5n_A 171 -----------LQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGS 239 (330)
T ss_dssp -----------EEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGG
T ss_pred -----------EEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence 34455433 1 1234567788899999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHcCCeeEEEEecCCCC-------CCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHH
Q psy13054 360 LLDQEALVEFLKDKKIGGAGLDVMIPE-------PLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCE 426 (1128)
Q Consensus 360 lVDe~AL~~AL~sG~IagAaLDVfe~E-------Pl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~ 426 (1128)
+|||+||++||++|+|+||+||||++| |++.++|||++||| ++|||++++|.+ ...++|+.
T Consensus 240 ~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nv------ilTPHia~~t~e~~~~~~~~~~~ni~ 313 (330)
T 4e5n_A 240 VVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNT------LFTPHIGSAVRAVRLEIERCAAQNIL 313 (330)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSE------EECSSCTTCCHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCE------EECCcCCCChHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 99999999999999 999999999974 34578888
Q ss_pred HHHHHHH
Q psy13054 427 EFFEELF 433 (1128)
Q Consensus 427 ~~~~~~~ 433 (1128)
+|+++..
T Consensus 314 ~~~~g~~ 320 (330)
T 4e5n_A 314 QALAGER 320 (330)
T ss_dssp HHHTTSC
T ss_pred HHHcCCC
Confidence 8887653
No 30
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.6e-52 Score=467.98 Aligned_cols=253 Identities=23% Similarity=0.294 Sum_probs=234.4
Q ss_pred CChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCcccc
Q psy13054 864 RNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQ 943 (1128)
Q Consensus 864 i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~ 943 (1128)
.+.++|+++ |+||||++.|+|+|++|++++ ++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|..
T Consensus 40 ~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~-- 115 (303)
T 1qp8_A 40 ITAEELAKM-PRLKFIQVVTAGLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGR-- 115 (303)
T ss_dssp CCHHHHHHC-TTCCCEEBSSSCCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC--
T ss_pred CCHHHHhhC-CCCcEEEECCcCcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC--
Confidence 456888887 999999999999999999995 7999999999999999999999999999999999999999999962
Q ss_pred ccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcc
Q psy13054 944 THIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKD 1023 (1128)
Q Consensus 944 ~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~ 1023 (1128)
.....+++|+||||||+|+||+.+|++|++|||+|++||++.. .. ......++++++++||+|++|+|++++
T Consensus 116 ----~~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~---~~~~~~~l~ell~~aDvV~l~~P~~~~ 187 (303)
T 1qp8_A 116 ----DVEIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EG---PWRFTNSLEEALREARAAVCALPLNKH 187 (303)
T ss_dssp ----CSCCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CS---SSCCBSCSHHHHTTCSEEEECCCCSTT
T ss_pred ----CCCCCCCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-cc---CcccCCCHHHHHhhCCEEEEeCcCchH
Confidence 1123379999999999999999999999999999999987665 21 122345899999999999999999999
Q ss_pred cccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEecc-CCCCCCCCCccccCCCeEECCCCCCC--c
Q psy13054 1024 TEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVM-IPEPLPADHPLVQLDNCVLTPHTSSA--T 1100 (1128)
Q Consensus 1024 T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~-e~EPl~~~~pL~~~pNvilTPHiag~--t 1100 (1128)
|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|+||+|||| ++||+++++|||++|||++|||+||+ |
T Consensus 188 t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t 267 (303)
T 1qp8_A 188 TRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGN 267 (303)
T ss_dssp TTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSC
T ss_pred HHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 88999999999999999999999998 9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1101 KAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1101 ~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
.++++++.+.+++||.+|++|+++.|.|
T Consensus 268 ~e~~~~~~~~~~~nl~~~~~g~~~~~~v 295 (303)
T 1qp8_A 268 ERVWRQMVMEAVRNLITYATGGRPRNIA 295 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcee
Confidence 9999999999999999999999988865
No 31
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=1.7e-51 Score=468.70 Aligned_cols=272 Identities=29% Similarity=0.478 Sum_probs=247.5
Q ss_pred HHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHh
Q psy13054 847 TAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSR 925 (1128)
Q Consensus 847 ~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R 925 (1128)
+.+.+++++++.+. .+++++++|+++ |+||||++.|+|+|+||+++|+++||.|+|+||+++.+||||+++++|++.|
T Consensus 59 ~~~~~~~~d~~i~~~~~~~~~~~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R 137 (333)
T 3ba1_A 59 LALQAESIRAVVGNSNAGADAELIDAL-PKLEIVSSFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLR 137 (333)
T ss_dssp HHHHTTTEEEEEECSSSCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCEEEEEcCCCCCCHHHHhhC-CCCcEEEEcCccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHh
Confidence 45556666655443 357999999997 9999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCc-ccCh
Q psy13054 926 RFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQ-LVPL 1004 (1128)
Q Consensus 926 ~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~-~~~l 1004 (1128)
++..+++.+++|.|... ......+++|++|||||+|+||+.+|+++++|||+|++||++..... ++. ..++
T Consensus 138 ~~~~~~~~~~~g~w~~~----~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----g~~~~~~l 209 (333)
T 3ba1_A 138 RICECDKYVRRGAWKFG----DFKLTTKFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT----NYTYYGSV 209 (333)
T ss_dssp THHHHHHHHHTTGGGGC----CCCCCCCCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----CSEEESCH
T ss_pred CHHHHHHHHHcCCCCcc----ccccccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc----CceecCCH
Confidence 99999999999999621 01123489999999999999999999999999999999987665432 444 3589
Q ss_pred HhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCcc
Q psy13054 1005 DTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPL 1084 (1128)
Q Consensus 1005 ~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL 1084 (1128)
++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||.++|+++|+++|++|+++||+||||++||++. +||
T Consensus 210 ~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L 288 (333)
T 3ba1_A 210 VELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVP-EKL 288 (333)
T ss_dssp HHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGG
T ss_pred HHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999876 999
Q ss_pred ccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1085 VQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1085 ~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
|++|||++|||+|+.|.++.+++.+.+++||.+|++|+++.|.|
T Consensus 289 ~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~V 332 (333)
T 3ba1_A 289 FGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLTPV 332 (333)
T ss_dssp GGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCSSBC
T ss_pred hcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999999999999999999999999876
No 32
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=7.1e-51 Score=474.24 Aligned_cols=289 Identities=22% Similarity=0.314 Sum_probs=232.8
Q ss_pred cchhhhhhhhccCCc-eEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHH
Q psy13054 43 LVPESLSKLRFNSRF-DIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDE 121 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~-~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~a 121 (1128)
+.++.++.++. ..+ ++.+++. ..+.+++.+.++++|++++++.+++++++|+++ |+||+|+++|+|+||||+++
T Consensus 13 ~~~~~~~~l~~-~~~~~v~~~~~---~~~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~iD~~~ 87 (404)
T 1sc6_A 13 VHQKALESLRA-AGYTNIEFHKG---ALDDEQLKESIRDAHFIGLRSRTHLTEDVINAA-EKLVAIGAFAIGTNQVDLDA 87 (404)
T ss_dssp CCHHHHHHHHH-TTCCCEEECSS---CCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHC-SSCCEEEECSSCCTTBCHHH
T ss_pred CCHHHHHHHHh-CCCcEEEEcCC---CCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCcEEEECCcccCccCHHH
Confidence 44555555542 236 6777652 357899999999999999888789999999986 89999999999999999999
Q ss_pred HHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccc
Q psy13054 122 IKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEI 201 (1128)
Q Consensus 122 a~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 201 (1128)
|+++||.|+|+|++|+++||||++++||+++|+++.++++++++ .|... .+
T Consensus 88 a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g-------------~W~~~----------------~~ 138 (404)
T 1sc6_A 88 AAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRG-------------VGNKL----------------AA 138 (404)
T ss_dssp HHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHT-------------CCC--------------------
T ss_pred HHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcC-------------Ccccc----------------CC
Confidence 99999999999999999999999999999999999998887763 23210 01
Q ss_pred cccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccc
Q psy13054 202 CQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPK 281 (1128)
Q Consensus 202 ~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~ 281 (1128)
.+.++.||++||||+|. ||+.+++++++|++.
T Consensus 139 ~~~el~gktlGiIGlG~---------------------------------IG~~vA~~l~~~G~~--------------- 170 (404)
T 1sc6_A 139 GSFEARGKKLGIIGYGH---------------------------------IGTQLGILAESLGMY--------------- 170 (404)
T ss_dssp -CCCSTTCEEEEECCSH---------------------------------HHHHHHHHHHHTTCE---------------
T ss_pred CccccCCCEEEEEeECH---------------------------------HHHHHHHHHHHCCCE---------------
Confidence 12345678999999973 678888888877543
Q ss_pred cccCCccccceeecccccccccccccCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCc
Q psy13054 282 WRMGSKTDTNHYFGYNWFERSNGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL 360 (1128)
Q Consensus 282 ~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~l 360 (1128)
+++|++..... ..+++++ +|+|++++||||++|||+|++|+||||++.|++||+|++|||+|||++
T Consensus 171 -----------V~~~d~~~~~~--~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~ 237 (404)
T 1sc6_A 171 -----------VYFYDIENKLP--LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTV 237 (404)
T ss_dssp -----------EEEECSSCCCC--CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSS
T ss_pred -----------EEEEcCCchhc--cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChH
Confidence 34444332211 1134554 899999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCeeEEEEecCCCCCCCC----CCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHH
Q psy13054 361 LDQEALVEFLKDKKIGGAGLDVMIPEPLPA----DHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFE 430 (1128)
Q Consensus 361 VDe~AL~~AL~sG~IagAaLDVfe~EPl~~----~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~ 430 (1128)
||++||++||++|+|+||+||||++||++. ++|||++||| ++|||++++|.+ ..+.+|+.+|++
T Consensus 238 vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nv------ilTPHi~~~T~ea~~~~~~~~~~nl~~~l~ 311 (404)
T 1sc6_A 238 VDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNV------LLTPHIGGSTQEAQENIGLEVAGKLIKYSD 311 (404)
T ss_dssp BCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTE------EEECCCSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCE------EECCCCCCCcHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999864 5799999999 999999999985 346789999888
Q ss_pred HH
Q psy13054 431 EL 432 (1128)
Q Consensus 431 ~~ 432 (1128)
+.
T Consensus 312 g~ 313 (404)
T 1sc6_A 312 NG 313 (404)
T ss_dssp HC
T ss_pred CC
Confidence 65
No 33
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=3.3e-52 Score=474.73 Aligned_cols=285 Identities=25% Similarity=0.339 Sum_probs=239.5
Q ss_pred CCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEecCC
Q psy13054 55 SRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGP 134 (1128)
Q Consensus 55 ~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~pg 134 (1128)
..+++++++. . ..+|+.+.++++|+++++..+++++++|+++ |+||+|+++|+||||||+++|+++||.|+|+|+
T Consensus 21 ~~~~~~~~~~---~-~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~ 95 (334)
T 2pi1_A 21 KDLSLKIYTT---D-VSKVPENELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPA 95 (334)
T ss_dssp TTSEEEECSS---C-GGGSCHHHHHHCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCTT
T ss_pred hcCCEEEECC---C-CcHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCccccccCHHHHHHCCeEEEECCC
Confidence 4456666543 1 2467889999999999987789999999986 799999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeeee
Q psy13054 135 VSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLI 214 (1128)
Q Consensus 135 ~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~gii 214 (1128)
+++++||||++++||+++|++..+++.++++ .|.... ...+..+.|+++|||
T Consensus 96 ~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g-------------~w~~~~---------------~~~~~~l~g~tvgIi 147 (334)
T 2pi1_A 96 YSPESVAEHTFAMILTLVKRLKRIEDRVKKL-------------NFSQDS---------------EILARELNRLTLGVI 147 (334)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHTTT-------------CCCCCG---------------GGCBCCGGGSEEEEE
T ss_pred cCcHHHHHHHHHHHHHHHHhHHHHHHHHHcC-------------CCcccc---------------CccceeccCceEEEE
Confidence 9999999999999999999999988766542 232100 011234567899999
Q ss_pred eccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccceee
Q psy13054 215 SLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYF 294 (1128)
Q Consensus 215 Glg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~ 294 (1128)
|+|. ||+.+++++++|++ +++
T Consensus 148 G~G~---------------------------------IG~~vA~~l~~~G~--------------------------~V~ 168 (334)
T 2pi1_A 148 GTGR---------------------------------IGSRVAMYGLAFGM--------------------------KVL 168 (334)
T ss_dssp CCSH---------------------------------HHHHHHHHHHHTTC--------------------------EEE
T ss_pred CcCH---------------------------------HHHHHHHHHHHCcC--------------------------EEE
Confidence 9973 67888888887754 344
Q ss_pred cccccccccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCC
Q psy13054 295 GYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKK 374 (1128)
Q Consensus 295 g~~~~~~~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~ 374 (1128)
+|+++......+.++++++++|++++||+|++|||+|++|+|+||++.|++||+|++|||+|||++|||+||++||++|+
T Consensus 169 ~~d~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~ 248 (334)
T 2pi1_A 169 CYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGK 248 (334)
T ss_dssp EECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTC
T ss_pred EECCCcchhhHhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCC
Confidence 55544433222457888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCCCCC---------------CCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHHH
Q psy13054 375 IGGAGLDVMIPEPL---------------PADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEELF 433 (1128)
Q Consensus 375 IagAaLDVfe~EPl---------------~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~~ 433 (1128)
|+||+||||++||+ |.+||||++||| ++|||++++|.+ ...++|+.+|+++..
T Consensus 249 i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nv------ilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~ 322 (334)
T 2pi1_A 249 FSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNV------IITPHIAYYTDKSLERIREETVKVVKAFVKGDL 322 (334)
T ss_dssp EEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTE------EECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCG
T ss_pred ceEEEeecCCCCCCccccccccccccccCccCChhhcCCCE------EECCccccChHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999997 578999999999 999999999986 456789999998765
Q ss_pred Hhhh
Q psy13054 434 DKNF 437 (1128)
Q Consensus 434 ~~~~ 437 (1128)
..|.
T Consensus 323 ~~~~ 326 (334)
T 2pi1_A 323 EQIK 326 (334)
T ss_dssp GGGG
T ss_pred CCce
Confidence 5443
No 34
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=5.5e-51 Score=466.76 Aligned_cols=283 Identities=20% Similarity=0.287 Sum_probs=236.3
Q ss_pred CCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCC--CCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEec
Q psy13054 55 SRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPH--QKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTV 132 (1128)
Q Consensus 55 ~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~--~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~ 132 (1128)
..+++.+++... .+.+++.+.++++|++++++. .++++++|+++ |+||+|+++|+|+||||+++|+++||.|+|+
T Consensus 39 ~g~ev~~~~~~~--~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~-p~Lk~i~~~g~G~d~id~~~a~~~gI~V~n~ 115 (351)
T 3jtm_A 39 QGHQYIVTDDKE--GPDCELEKHIPDLHVLISTPFHPAYVTAERIKKA-KNLKLLLTAGIGSDHIDLQAAAAAGLTVAEV 115 (351)
T ss_dssp TTCEEEEESCCS--STTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHC-SSCCEEEESSSCCTTBCHHHHHHTTCEEEEC
T ss_pred CCCEEEEeCCCC--CCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhC-CCCeEEEEeCeeecccCHHHHHhcCeeEEEC
Confidence 458888876432 356789999999999998653 46999999986 8999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceee
Q psy13054 133 GPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYL 212 (1128)
Q Consensus 133 pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~g 212 (1128)
||+++++||||++++||+++|++..+++.++++ . |..... ...+..+.||++|
T Consensus 116 ~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g-~------------W~~~~~--------------~~~~~~l~gktvG 168 (351)
T 3jtm_A 116 TGSNVVSVAEDELMRILILMRNFVPGYNQVVKG-E------------WNVAGI--------------AYRAYDLEGKTIG 168 (351)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-C------------CCHHHH--------------HTTCCCSTTCEEE
T ss_pred CCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcC-C------------Cccccc--------------cCCcccccCCEEe
Confidence 999999999999999999999999988877653 3 321000 0012235678999
Q ss_pred eeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccce
Q psy13054 213 LISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNH 292 (1128)
Q Consensus 213 iiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~ 292 (1128)
|||+|. ||+.+++++++|++.
T Consensus 169 IIG~G~---------------------------------IG~~vA~~l~~~G~~-------------------------- 189 (351)
T 3jtm_A 169 TVGAGR---------------------------------IGKLLLQRLKPFGCN-------------------------- 189 (351)
T ss_dssp EECCSH---------------------------------HHHHHHHHHGGGCCE--------------------------
T ss_pred EEEeCH---------------------------------HHHHHHHHHHHCCCE--------------------------
Confidence 999973 678888888877553
Q ss_pred eecccccc--cccccccCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHH
Q psy13054 293 YFGYNWFE--RSNGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEF 369 (1128)
Q Consensus 293 ~~g~~~~~--~~~~~~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~A 369 (1128)
+++|++.. .+...+.|++++ +++|++++||+|++|||+|++|+|+||++.|++||+|++|||+|||++|||+||++|
T Consensus 190 V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~a 269 (351)
T 3jtm_A 190 LLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDA 269 (351)
T ss_dssp EEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHH
T ss_pred EEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHH
Confidence 33444332 122345677777 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChhh------hHHHHHHHHHHHH
Q psy13054 370 LKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHPL------VQLDNCEEFFEEL 432 (1128)
Q Consensus 370 L~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~~------~~~~n~~~~~~~~ 432 (1128)
|++|+|+||+||||++||+|.+||||++||| ++|||++++|.+. .+.+|+.+|+++.
T Consensus 270 L~~g~i~ga~lDV~~~EP~~~~~pL~~~~nv------ilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~ 332 (351)
T 3jtm_A 270 VESGHIGGYSGDVWDPQPAPKDHPWRYMPNQ------AMTPHTSGTTIDAQLRYAAGTKDMLERYFKGE 332 (351)
T ss_dssp HHHTSEEEEEESCCSSSSCCTTCGGGTSTTB------CCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhCCccEEEeCCCCCCCCCCCChhhcCCCE------EECCcCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999 9999999998753 4567787777754
No 35
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.5e-50 Score=461.59 Aligned_cols=282 Identities=31% Similarity=0.484 Sum_probs=252.7
Q ss_pred chHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHH
Q psy13054 844 GLETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIA 922 (1128)
Q Consensus 844 ~~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~ 922 (1128)
.++..+.+++++++.+. .+++++++|+++ |+||||++.|+|+|++|+++|+++||.|+|+||+++.+||||+++++|+
T Consensus 33 ~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~ 111 (333)
T 2d0i_A 33 GEELKGVIGRFDGIIVSPTTKITREVLENA-ERLKVISCHSAGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIIN 111 (333)
T ss_dssp HHHHHHHGGGCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCEEEEECCCCCCCHHHHhhC-CCceEEEECCcccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHH
Confidence 44566677777765533 357999999997 9999999999999999999999999999999999999999999999999
Q ss_pred HHhccHHHHHHHHcCCCccccccccC-CcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc
Q psy13054 923 VSRRFQEGRKCITSGEWALKQTHIIG-PNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL 1001 (1128)
Q Consensus 923 ~~R~i~~~~~~~~~g~w~~~~~~~~~-~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~ 1001 (1128)
+.|++..+++.+++|.|......... ....+++|++|||||+|.||+.+|+++++|||+|++||++.......+.|+..
T Consensus 112 ~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~ 191 (333)
T 2d0i_A 112 LMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARY 191 (333)
T ss_dssp HHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEE
T ss_pred HHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCcee
Confidence 99999999999999999621000000 01158999999999999999999999999999999999877653344556666
Q ss_pred cChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCC
Q psy13054 1002 VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPAD 1081 (1128)
Q Consensus 1002 ~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~ 1081 (1128)
.++++++++||+|++|+|.+++|+++++++.++.||+| +|||+|||.++|+++|.++|++|+|+||++|||++||++ +
T Consensus 192 ~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~ 269 (333)
T 2d0i_A 192 MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVR-E 269 (333)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCS-C
T ss_pred cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCC-C
Confidence 79999999999999999999999999999999999999 999999999999999999999999999999999999988 9
Q ss_pred CccccCC-CeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1082 HPLVQLD-NCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1082 ~pL~~~p-NvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+|||.+| ||++|||+|+.|.++.+++.+.+++||.+|++|+++.|.|
T Consensus 270 ~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v 317 (333)
T 2d0i_A 270 HELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVPEDLV 317 (333)
T ss_dssp CGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCCTTBS
T ss_pred chHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcCcc
Confidence 9999999 9999999999999999999999999999999999988765
No 36
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=2.9e-50 Score=459.12 Aligned_cols=282 Identities=42% Similarity=0.628 Sum_probs=255.2
Q ss_pred hHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHH
Q psy13054 845 LETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAV 923 (1128)
Q Consensus 845 ~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~ 923 (1128)
+++.+.++++++..+. .+++++++|++++|+||||++.++|+|++|+++|+++||.|+|+|++++.+||||+++++|++
T Consensus 45 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~ 124 (330)
T 2gcg_A 45 KELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTT 124 (330)
T ss_dssp HHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHH
Confidence 5667777777765543 357899999985489999999999999999999999999999999999999999999999999
Q ss_pred HhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc
Q psy13054 924 SRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV 1002 (1128)
Q Consensus 924 ~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~ 1002 (1128)
.|++..+++.+++|.|.... .......++.|++|||||+|.||+.+|++++++||+|++||++..+.. ..+.++..+
T Consensus 125 ~R~~~~~~~~~~~~~w~~~~--~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~ 202 (330)
T 2gcg_A 125 CRRLPEAIEEVKNGGWTSWK--PLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV 202 (330)
T ss_dssp HTTHHHHHHHHHTTCCCSCC--TTSSCBCCCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC
T ss_pred HhCHHHHHHHHHcCCCcccC--cccccCcCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC
Confidence 99999999999999996200 001123489999999999999999999999999999999998765443 445566667
Q ss_pred ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCC
Q psy13054 1003 PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADH 1082 (1128)
Q Consensus 1003 ~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~ 1082 (1128)
++++++++||+|++|+|.+++|+++++++.++.||+|++|||+|||+++|+++|.++|++|+|.||++|||++||+++++
T Consensus 203 ~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~ 282 (330)
T 2gcg_A 203 STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNH 282 (330)
T ss_dssp CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTC
T ss_pred CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1083 PLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1083 pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
|||++|||++|||+|+.|.++.+++.+.+++|+.+|++|+++.|.|
T Consensus 283 ~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v 328 (330)
T 2gcg_A 283 PLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSEL 328 (330)
T ss_dssp GGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCCCTTEE
T ss_pred hhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999999999999999999999999999988864
No 37
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=1.8e-50 Score=463.64 Aligned_cols=264 Identities=27% Similarity=0.369 Sum_probs=241.4
Q ss_pred cCCChhhhhcCCC-CccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCC--
Q psy13054 862 TSRNKVKTPKRTE-NLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGE-- 938 (1128)
Q Consensus 862 ~~i~~~~l~~~~~-~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~-- 938 (1128)
+++++++|+++ | +||||++.++|+|+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+++|.
T Consensus 67 ~~~~~~~l~~~-~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~ 145 (348)
T 2w2k_A 67 YPWNADLISHL-PSSLKVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPE 145 (348)
T ss_dssp CCBCHHHHTTS-CTTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHH
T ss_pred CCCCHHHHHhc-ccCceEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCc
Confidence 57899999997 7 6999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -CccccccccCCcccccCCCeEEEEEcChhhHHHHHHHh-hCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEE
Q psy13054 939 -WALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLK-AFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFI 1014 (1128)
Q Consensus 939 -w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~-afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV 1014 (1128)
|...... ......+++|++|||||+|+||+.+|++++ +|||+|++||++....+ ..+.|+..+ ++++++++||+|
T Consensus 146 ~w~~~~~~-~~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV 224 (348)
T 2w2k_A 146 TFNRVHLE-IGKSAHNPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCV 224 (348)
T ss_dssp HHHHHHHH-HHTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEE
T ss_pred cccccccc-ccccCcCCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEE
Confidence 9410000 001234899999999999999999999999 99999999998765543 444577766 899999999999
Q ss_pred EEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECC
Q psy13054 1015 FVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTP 1094 (1128)
Q Consensus 1015 ~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTP 1094 (1128)
++|+|++++|+++|+++.++.||+|++|||+|||+++|+++|.++|++|+|+||++|||++|| +.++|||++|||++||
T Consensus 225 il~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nviltP 303 (348)
T 2w2k_A 225 SVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLTT 303 (348)
T ss_dssp EECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEECC
T ss_pred EEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEcC
Confidence 999999999999999999999999999999999999999999999999999999999999999 6788999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1095 HTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1095 Hiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
|+|+.|.++.+++.+.+++||.+|++|+++.|.|
T Consensus 304 H~~~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~v 337 (348)
T 2w2k_A 304 HIGGVAIETFHEFERLTMTNIDRFLLQGKPLLTP 337 (348)
T ss_dssp SCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCSSB
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHcCCCCccee
Confidence 9999999999999999999999999999888765
No 38
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-51 Score=467.50 Aligned_cols=289 Identities=22% Similarity=0.306 Sum_probs=215.1
Q ss_pred ccchhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHH
Q psy13054 42 LLVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDE 121 (1128)
Q Consensus 42 ~l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~a 121 (1128)
.+.++.++.|+ +.|++..++. ..+.+++++.++++|+++++..+++++++|+++ |+||+|+++|+||||||+++
T Consensus 38 ~~~~~~~~~L~--~~~~v~~~~~---~~~~~~~~~~~~~~d~li~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~d~id~~~ 111 (340)
T 4dgs_A 38 PMMPFVMDELQ--RNYSVHRLYQ---AADRPALEAALPSIRAVATGGGAGLSNEWMEKL-PSLGIIAINGVGTDKVDLAR 111 (340)
T ss_dssp CCCHHHHHTHH--HHSCCEETTC---GGGHHHHHHHGGGCCEEEEETTTCBCHHHHHHC-SSCCEEEEESSCCTTBCHHH
T ss_pred CCCHHHHHHHh--cCCcEEEeCC---CCCHHHHHHHhCCcEEEEEcCCCCCCHHHHhhC-CCCEEEEECCCCccccCHHH
Confidence 57778888875 5688877643 135678888889999999987789999999986 89999999999999999999
Q ss_pred HHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccc
Q psy13054 122 IKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEI 201 (1128)
Q Consensus 122 a~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 201 (1128)
|+++||.|+|+||+++++||||++++||+++|++..+++.++++ . |.... . + .
T Consensus 112 a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g-~------------W~~~~-~--------~-----~ 164 (340)
T 4dgs_A 112 ARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREG-R------------WAAGE-Q--------L-----P 164 (340)
T ss_dssp HHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-C------------C--------------------C
T ss_pred HHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcC-C------------ccccc-C--------c-----C
Confidence 99999999999999999999999999999999999998877653 3 32100 0 0 0
Q ss_pred cccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccc
Q psy13054 202 CQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPK 281 (1128)
Q Consensus 202 ~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~ 281 (1128)
.+..+.||++||||+|. +|+.++++++++++.
T Consensus 165 ~~~~l~gktiGIIGlG~---------------------------------IG~~vA~~l~~~G~~--------------- 196 (340)
T 4dgs_A 165 LGHSPKGKRIGVLGLGQ---------------------------------IGRALASRAEAFGMS--------------- 196 (340)
T ss_dssp CCCCCTTCEEEEECCSH---------------------------------HHHHHHHHHHTTTCE---------------
T ss_pred ccccccCCEEEEECCCH---------------------------------HHHHHHHHHHHCCCE---------------
Confidence 12345678999999973 678888888877653
Q ss_pred cccCCccccceeecccccccccccccCCc-ccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCc
Q psy13054 282 WRMGSKTDTNHYFGYNWFERSNGTALGAQ-LVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL 360 (1128)
Q Consensus 282 ~~~g~~~~~~~~~g~~~~~~~~~~~~g~~-~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~l 360 (1128)
+++|++.... ..++. +.+++|++++||+|++|||+|++|+++||++.|++||+|++|||+|||++
T Consensus 197 -----------V~~~dr~~~~---~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~v 262 (340)
T 4dgs_A 197 -----------VRYWNRSTLS---GVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNV 262 (340)
T ss_dssp -----------EEEECSSCCT---TSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--
T ss_pred -----------EEEEcCCccc---ccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcc
Confidence 2333332221 12233 34999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHH
Q psy13054 361 LDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 361 VDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~ 432 (1128)
|||+||++||++|+|+||+||||++||++. +|||++||| ++|||++++|.+ ...++|+.+|+++.
T Consensus 263 vde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nv------ilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~ 333 (340)
T 4dgs_A 263 VDEDALIEALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNT------VLMPHQGSATVETRMAMGKLVLANLAAHFAGE 333 (340)
T ss_dssp ------------CCSSEEEESCCSSSSSCC-SHHHHSSSE------EECSSCSSCCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cCHHHHHHHHHcCCceEEEeCCcCCCCCCc-cchhhCCCE------EEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999765 599999999 999999999985 44568888877654
No 39
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=1.8e-51 Score=469.20 Aligned_cols=280 Identities=24% Similarity=0.318 Sum_probs=231.4
Q ss_pred CceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHH-HHhccC-CCceEEEEcCcccccccHHHHHhCCcEEEecC
Q psy13054 56 RFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKE-VLDRSG-ENLKVIATFSVGHDHLHLDEIKSRGIRVGTVG 133 (1128)
Q Consensus 56 ~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~e-vL~~~~-~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~p 133 (1128)
.+++.+++.. .+ +++++.++++|+++++..++++++ +|++++ ++||+|+++|+||||||+++|+++||.|+|+|
T Consensus 25 ~~~v~~~~~~---~~-~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p 100 (343)
T 2yq5_A 25 DVEIKTTDQA---LT-SATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIVGFNTINFDWTKKYNLLVTNVP 100 (343)
T ss_dssp TCEEEEESSC---CS-TTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSSCCTTBCSSTTCC--CEEECCS
T ss_pred CeEEEECCCC---CC-HHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECceeecccchhHHHhCCEEEEECC
Confidence 5778776642 22 567899999999999877899999 999873 47999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhhchHHHHHHHH-hhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceee
Q psy13054 134 PVSSDTVAEYNIGLAIAVSRRFQQRHNWIA-RLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYL 212 (1128)
Q Consensus 134 g~~~~aVAE~alalmL~l~R~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~g 212 (1128)
++++++||||++++||+++|++..+++.++ ++ +| .|.. ...+..+.||++|
T Consensus 101 ~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g-~~----------~w~~-----------------~~~~~~l~gktvg 152 (343)
T 2yq5_A 101 VYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDH-DF----------TWPS-----------------NLISNEIYNLTVG 152 (343)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHC-CC----------CCCG-----------------GGCBCCGGGSEEE
T ss_pred CCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcC-Cc----------cccc-----------------CCCccccCCCeEE
Confidence 999999999999999999999999888776 43 22 2311 0123345678999
Q ss_pred eeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccce
Q psy13054 213 LISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNH 292 (1128)
Q Consensus 213 iiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~ 292 (1128)
|||+|. ||+.+++++++|++.
T Consensus 153 IiGlG~---------------------------------IG~~vA~~l~~~G~~-------------------------- 173 (343)
T 2yq5_A 153 LIGVGH---------------------------------IGSAVAEIFSAMGAK-------------------------- 173 (343)
T ss_dssp EECCSH---------------------------------HHHHHHHHHHHTTCE--------------------------
T ss_pred EEecCH---------------------------------HHHHHHHHHhhCCCE--------------------------
Confidence 999973 678888888877543
Q ss_pred eecccccccccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHc
Q psy13054 293 YFGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKD 372 (1128)
Q Consensus 293 ~~g~~~~~~~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~s 372 (1128)
+++|+++.... .+.++++++++|++++||+|++|||+|++|+|+||++.|++||||++|||+|||++|||+||++||++
T Consensus 174 V~~~d~~~~~~-~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~ 252 (343)
T 2yq5_A 174 VIAYDVAYNPE-FEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQD 252 (343)
T ss_dssp EEEECSSCCGG-GTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred EEEECCChhhh-hhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHc
Confidence 34455443322 22346778999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEecCCCCC--CCCC-----------CCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHHH
Q psy13054 373 KKIGGAGLDVMIPEP--LPAD-----------HPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEELF 433 (1128)
Q Consensus 373 G~IagAaLDVfe~EP--l~~~-----------~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~~ 433 (1128)
|+|+||+||||++|| ++.+ +|||++||| ++|||++++|.+ ...++|+.+|+++..
T Consensus 253 g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nv------ilTPHia~~t~ea~~~~~~~~~~ni~~~l~g~~ 326 (343)
T 2yq5_A 253 GEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNV------VITPHSAFYTETSIRNMVQICLTDQLTIAKGGR 326 (343)
T ss_dssp TSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTE------EECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEecccccCCCccccccccccccccchhHHhcCCCE------EECCccccchHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999 5555 489999999 999999999986 345678888777653
No 40
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=1.3e-50 Score=464.16 Aligned_cols=290 Identities=20% Similarity=0.288 Sum_probs=239.3
Q ss_pred CceEEEcCCCCCCCCHHHHHHhcCCceEEEe-CCCCCCCHHHHhccCCCceEEEEcCccc----ccccHHHHHhCCcEEE
Q psy13054 56 RFDIDTYPVSEGRMPRDIFIEKLKGCSALLC-NPHQKVDKEVLDRSGENLKVIATFSVGH----DHLHLDEIKSRGIRVG 130 (1128)
Q Consensus 56 ~~~v~~~~~~~~~~~~eel~~~l~~adaIi~-~~~~~i~~evL~~~~~~LK~I~~~gvG~----DnIDl~aa~erGI~V~ 130 (1128)
.+++++++.. ..+.+++.+.++++|++++ +..+++++++|+++ |+||+|+++|+|+ ||||+++|+++||.|+
T Consensus 26 ~~~v~~~~~~--~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~-~~Lk~I~~~g~G~~~~~d~id~~~a~~~gI~V~ 102 (352)
T 3gg9_A 26 DHEVKVFNNT--VKGVGQLAARVADVEALVLIRERTRVTRQLLDRL-PKLKIISQTGRVSRDAGGHIDLEACTDKGVVVL 102 (352)
T ss_dssp TSEEEECCSC--CCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTC-TTCCEEEESSCCCCSSSCSBCHHHHHHHTCEEE
T ss_pred CceEEEecCC--CCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhC-CCCeEEEEeCcccCCccCcccHHHHHhCCeEEE
Confidence 4888887642 2467889999999999998 55678999999986 8999999999999 9999999999999999
Q ss_pred ecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccce
Q psy13054 131 TVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKA 210 (1128)
Q Consensus 131 n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt 210 (1128)
|+||+ +++||||++++||++.|++..+++.++++ .|..... ....|+. ....+..+.||+
T Consensus 103 n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g-~W~~~~~--~~~~~~~----------------~~~~~~~l~g~t 162 (352)
T 3gg9_A 103 EGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHG-AWQQSGL--KSTTMPP----------------NFGIGRVLKGQT 162 (352)
T ss_dssp CCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTT-CTTCCCC--CCTTSCT----------------TTTSBCCCTTCE
T ss_pred ECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcC-CCCcccc--ccccccc----------------ccccCccCCCCE
Confidence 99999 99999999999999999999998877653 3421000 0001110 001133456789
Q ss_pred eeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCcccc
Q psy13054 211 YLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDT 290 (1128)
Q Consensus 211 ~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~ 290 (1128)
+||||+|. ||+.++++++++++
T Consensus 163 vGIIGlG~---------------------------------IG~~vA~~l~~~G~------------------------- 184 (352)
T 3gg9_A 163 LGIFGYGK---------------------------------IGQLVAGYGRAFGM------------------------- 184 (352)
T ss_dssp EEEECCSH---------------------------------HHHHHHHHHHHTTC-------------------------
T ss_pred EEEEeECH---------------------------------HHHHHHHHHHhCCC-------------------------
Confidence 99999873 67888888877654
Q ss_pred ceeecccccccc-cccccCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHH
Q psy13054 291 NHYFGYNWFERS-NGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVE 368 (1128)
Q Consensus 291 ~~~~g~~~~~~~-~~~~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~ 368 (1128)
++++|+++.+. ...+.|++++ +++|++++||+|++|||+|++|+|+||++.|++||+|++|||+|||++|||+||++
T Consensus 185 -~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~ 263 (352)
T 3gg9_A 185 -NVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVT 263 (352)
T ss_dssp -EEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHH
T ss_pred -EEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHH
Confidence 33455543321 2345678888 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHHH
Q psy13054 369 FLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEELF 433 (1128)
Q Consensus 369 AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~~ 433 (1128)
||++|+|+||+||||++||+|.++|||++||| ++|||++++|.+ ...++|+.+|+++..
T Consensus 264 aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv------ilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~p 328 (352)
T 3gg9_A 264 ALNRGRPGMAAIDVFETEPILQGHTLLRMENC------ICTPHIGYVERESYEMYFGIAFQNILDILQGNV 328 (352)
T ss_dssp HHHHTSSSEEEECCCSSSCCCSCCGGGGCTTE------EECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhCCccEEEecccCCCCCCCCChhhcCCCE------EECCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999 999999999875 345688888877643
No 41
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=3.5e-50 Score=459.09 Aligned_cols=282 Identities=34% Similarity=0.506 Sum_probs=252.5
Q ss_pred hHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHH
Q psy13054 845 LETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAV 923 (1128)
Q Consensus 845 ~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~ 923 (1128)
+++.+.++++++..+. .+++++++|+++ |+||||++.|+|+|++|+++|+++||.|+|+||+++.+||||+++++|++
T Consensus 37 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~ 115 (334)
T 2dbq_A 37 EILLKKVKEVDALVTMLSERIDKEVFENA-PKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLAT 115 (334)
T ss_dssp HHHHHHTTSCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcEEEEEcCCCCCCHHHHhhC-CCceEEEECCcccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHH
Confidence 4556666667655543 247899999997 99999999999999999999999999999999999999999999999999
Q ss_pred HhccHHHHHHHHcCCCccc--cccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc
Q psy13054 924 SRRFQEGRKCITSGEWALK--QTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL 1001 (1128)
Q Consensus 924 ~R~i~~~~~~~~~g~w~~~--~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~ 1001 (1128)
.|++..+++.+++|.|... .+........++.|++|||||+|.||+.+|++++++||+|++||++.......+.|+..
T Consensus 116 ~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~ 195 (334)
T 2dbq_A 116 ARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEF 195 (334)
T ss_dssp HHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEE
T ss_pred HhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCccc
Confidence 9999999999999999510 00000112348999999999999999999999999999999999877653244557777
Q ss_pred cChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCC
Q psy13054 1002 VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPAD 1081 (1128)
Q Consensus 1002 ~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~ 1081 (1128)
.++++++++||+|++|+|.+++|+++++++.++.||++++|||+|||.++|+++|.++|++|+|+||++|||++|| +.+
T Consensus 196 ~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~ 274 (334)
T 2dbq_A 196 KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YYN 274 (334)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSS-CCC
T ss_pred CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCC-CCC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999999999 889
Q ss_pred CccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1082 HPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1082 ~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+|||.+|||++|||+|+.|.++.+++.+.+++||.+|++|+++.|.|
T Consensus 275 ~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v 321 (334)
T 2dbq_A 275 EELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIPPTLV 321 (334)
T ss_dssp HHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCCTTBS
T ss_pred chhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcccc
Confidence 99999999999999999999999999999999999999999988765
No 42
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=7.1e-51 Score=454.55 Aligned_cols=238 Identities=25% Similarity=0.363 Sum_probs=217.9
Q ss_pred cCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCc
Q psy13054 871 KRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPN 950 (1128)
Q Consensus 871 ~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~ 950 (1128)
++ |+||||++.|+|+|+||+++|++++|.++| ++.++.+||||+++++|++.|++..+++.+++|+|.+ ..
T Consensus 46 ~~-~~Lk~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~-------~~ 116 (290)
T 3gvx_A 46 LG-KRTKMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQ-------SP 116 (290)
T ss_dssp CC-SSCCEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC-------CC
T ss_pred hh-hhhHHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhccccc-------CC
Confidence 44 999999999999999999999998776666 4889999999999999999999999999999999973 12
Q ss_pred ccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc-ChHhhhccCCEEEEecCCCcccccccC
Q psy13054 951 IMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 951 ~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
+.+++|+||||||+|.||+++|++|++|||+|++||++...... +... ++++++++||+|++|+|++++|+++|+
T Consensus 117 ~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~----~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~ 192 (290)
T 3gvx_A 117 TTLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV----DVISESPADLFRQSDFVLIAIPLTDKTRGMVN 192 (290)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC----SEECSSHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred ceeeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc----ccccCChHHHhhccCeEEEEeeccccchhhhh
Confidence 35899999999999999999999999999999999977654331 3344 899999999999999999999999999
Q ss_pred HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCC-CCcHHHHHHHH
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTS-SATKAVRDEKS 1108 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHia-g~t~e~~~~~~ 1108 (1128)
++.|+.||+|++|||+|||+++|++||+++|++|+|.||+||||++||+ +|||++|||++|||+| ++|.++.+++.
T Consensus 193 ~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTPHiag~~t~e~~~~~~ 269 (290)
T 3gvx_A 193 SRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILSPHVAGGMSGEIMDIAI 269 (290)
T ss_dssp HHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECCSCSSCBTTBCCHHHH
T ss_pred HHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcCccccCCccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999997 8999999999999999 99999999999
Q ss_pred HHHHHHHHHHHcCCCC
Q psy13054 1109 STSAENIIRGYKGEPM 1124 (1128)
Q Consensus 1109 ~~~~~nl~~~l~G~~l 1124 (1128)
+.+++||.+|++|+.-
T Consensus 270 ~~~~~ni~~~~~~~~~ 285 (290)
T 3gvx_A 270 QLAFENVRNFFEGEGH 285 (290)
T ss_dssp HHHHHHHHHHTC----
T ss_pred HHHHHHHHhhhcCCCc
Confidence 9999999999999853
No 43
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=1.3e-50 Score=464.79 Aligned_cols=290 Identities=22% Similarity=0.282 Sum_probs=233.6
Q ss_pred cchhhhhhhhccCCceEEEcCCCCCCCCHHHHHH-hcCCceEEEeCCCCCCCHHHHhccCCCceEEEEc-CcccccccHH
Q psy13054 43 LVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIE-KLKGCSALLCNPHQKVDKEVLDRSGENLKVIATF-SVGHDHLHLD 120 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~-~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~-gvG~DnIDl~ 120 (1128)
+.++.++.|+ +.+++..+.. .+.+++++ .+.++++++. ..++++++|+++ |+||+|+++ |+||||||++
T Consensus 44 ~~~~~~~~L~--~~~~v~~~~~----~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~-p~Lk~I~~~~~~G~d~iD~~ 114 (365)
T 4hy3_A 44 FSDEARAALH--SKYEIVEADP----ENIAGLGDDILGRARYIIG--QPPLSAETLARM-PALRSILNVESNLLNNMPYE 114 (365)
T ss_dssp CCHHHHHHHH--HHSEEEECCG----GGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTC-TTCCEEECCSSSCCSCSCTT
T ss_pred CCHHHHHHHh--CCcEEEECCC----CChHHHHHHhhCCeEEEEe--CCCCCHHHHhhC-CCCeEEEEecccccCcccHH
Confidence 4556677765 4578875432 23455544 3467888775 358999999986 899999975 8999999999
Q ss_pred HHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCcccc
Q psy13054 121 EIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNE 200 (1128)
Q Consensus 121 aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 200 (1128)
+|+++||.|+|+|++++++||||++++||+++|++..+++.++++ .| .|... ..
T Consensus 115 ~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g-~~----------~w~~~---------------~~ 168 (365)
T 4hy3_A 115 VLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEG-TE----------LWGGE---------------GN 168 (365)
T ss_dssp HHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHT-CC----------CCSSS---------------ST
T ss_pred HHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcC-Cc----------ccccc---------------cc
Confidence 999999999999999999999999999999999999988877654 11 13210 01
Q ss_pred ccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCcc
Q psy13054 201 ICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNP 280 (1128)
Q Consensus 201 ~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va 280 (1128)
..+..+.||++||||+|. ||+.+++++++|++.
T Consensus 169 ~~~~~l~gktvGIIGlG~---------------------------------IG~~vA~~l~~fG~~-------------- 201 (365)
T 4hy3_A 169 ASARLIAGSEIGIVGFGD---------------------------------LGKALRRVLSGFRAR-------------- 201 (365)
T ss_dssp TSCCCSSSSEEEEECCSH---------------------------------HHHHHHHHHTTSCCE--------------
T ss_pred ccccccCCCEEEEecCCc---------------------------------ccHHHHHhhhhCCCE--------------
Confidence 123346678999999973 688889998887553
Q ss_pred ccccCCccccceeeccccccccc-ccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCC
Q psy13054 281 KWRMGSKTDTNHYFGYNWFERSN-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGG 359 (1128)
Q Consensus 281 ~~~~g~~~~~~~~~g~~~~~~~~-~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~ 359 (1128)
+++|+++.+.. ..+.|+++++|+|++++||||++|||+|++|+|+||++.|++||||++|||+|||+
T Consensus 202 ------------V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~ 269 (365)
T 4hy3_A 202 ------------IRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRAD 269 (365)
T ss_dssp ------------EEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGG
T ss_pred ------------EEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCc
Confidence 34455443221 34567888899999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHHH
Q psy13054 360 LLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEELF 433 (1128)
Q Consensus 360 lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~~ 433 (1128)
+|||+||++||++|+|+ ||||||++||+|.+||||++||| ++|||++++|.+ ..+++|+.+|+++..
T Consensus 270 ~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nv------ilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~~ 342 (365)
T 4hy3_A 270 VVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGF------IRSAHRAGALDSAFKKMGDMVLEDMDLMDRGLP 342 (365)
T ss_dssp GSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTE------EECCSCSSCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCE------EECCccccCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999998 89999999999999999999999 999999999985 445788888877653
No 44
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=1.2e-50 Score=459.13 Aligned_cols=265 Identities=21% Similarity=0.276 Sum_probs=220.7
Q ss_pred CHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHH
Q psy13054 70 PRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAI 149 (1128)
Q Consensus 70 ~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL 149 (1128)
+.+++.+.++++|+++++ .++++++|+++ |+||+|+++|+||||||++++++ ||.|+|+||+++++||||++++||
T Consensus 37 ~~~~~~~~~~~ad~li~~--~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L 112 (324)
T 3hg7_A 37 NQSDAEKLIGEAHILMAE--PARAKPLLAKA-NKLSWFQSTYAGVDVLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLL 112 (324)
T ss_dssp SHHHHHHHGGGCSEEEEC--HHHHGGGGGGC-TTCCEEEESSSCCGGGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHH
T ss_pred ChhHHHHHhCCCEEEEEC--CCCCHHHHhhC-CCceEEEECCCCCCccChHHHhC-CEEEEECCCcChHHHHHHHHHHHH
Confidence 467888999999999984 35678899986 89999999999999999998864 999999999999999999999999
Q ss_pred HHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeeeeeccccccCCCCCccc
Q psy13054 150 AVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKW 229 (1128)
Q Consensus 150 ~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w 229 (1128)
+++|++..+++.+++ +.|... .+..+.|+++||||+|.
T Consensus 113 ~~~R~~~~~~~~~~~-------------g~W~~~------------------~~~~l~g~tvGIIGlG~----------- 150 (324)
T 3hg7_A 113 SLMRQLPLYREQQKQ-------------RLWQSH------------------PYQGLKGRTLLILGTGS----------- 150 (324)
T ss_dssp HHHTTHHHHHHHHHT-------------TCCCCC------------------CCCCSTTCEEEEECCSH-----------
T ss_pred HHHhChHHHHHHHhh-------------CCCcCC------------------CCcccccceEEEEEECH-----------
Confidence 999999998886654 234311 11235678999999973
Q ss_pred ccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccceeecccccccccc-cccC
Q psy13054 230 RMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERSNG-TALG 308 (1128)
Q Consensus 230 ~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~~~-~~~g 308 (1128)
||+.+++++++|++. +++|++..+... ....
T Consensus 151 ----------------------IG~~vA~~l~~~G~~--------------------------V~~~dr~~~~~~~~~~~ 182 (324)
T 3hg7_A 151 ----------------------IGQHIAHTGKHFGMK--------------------------VLGVSRSGRERAGFDQV 182 (324)
T ss_dssp ----------------------HHHHHHHHHHHTTCE--------------------------EEEECSSCCCCTTCSEE
T ss_pred ----------------------HHHHHHHHHHhCCCE--------------------------EEEEcCChHHhhhhhcc
Confidence 688889998887654 233333221111 1112
Q ss_pred CcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCC
Q psy13054 309 AQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPL 388 (1128)
Q Consensus 309 ~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl 388 (1128)
..+.+|+|++++||||++|||+|++|+|+||++.|++||+|++|||+|||++|||+||++||++|+|+||+||||++||+
T Consensus 183 ~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl 262 (324)
T 3hg7_A 183 YQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPL 262 (324)
T ss_dssp ECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSC
T ss_pred cccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCC
Confidence 34569999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCCCCcccccccCCCCChh----hhHHHHHHHHHHHHHH
Q psy13054 389 PADHPLVQLDNCGGAGLDVMIPEPLPADHP----LVQLDNCEEFFEELFD 434 (1128)
Q Consensus 389 ~~~~pL~~lpNvg~~~~~v~tph~~~~t~~----~~~~~n~~~~~~~~~~ 434 (1128)
|.+||||++||| ++|||++++|.+ ....+|+.+|+++...
T Consensus 263 ~~~~pL~~~~nv------ilTPHia~~t~~~~~~~~~~~nl~~~~~G~~~ 306 (324)
T 3hg7_A 263 PADSPLWGQPNL------IITPHNSAYSFPDDVAQIFVRNYIRFIDGQPL 306 (324)
T ss_dssp CTTCTTTTCTTE------EECCSCSSCCCHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCCChhhcCCCE------EEeCCCccccHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999 999999999874 3446777777776543
No 45
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-49 Score=449.81 Aligned_cols=290 Identities=23% Similarity=0.354 Sum_probs=237.1
Q ss_pred cchhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHH
Q psy13054 43 LVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEI 122 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa 122 (1128)
+.+...+.++. ..+++..++. .+.+++.+.++++|+++++..+++++++|+++ |+||+|+++|+||||||+++|
T Consensus 35 ~~~~~~~~l~~-~~~~v~~~~~----~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~ 108 (335)
T 2g76_A 35 LDPCCRKILQD-GGLQVVEKQN----LSKEELIAELQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDNVDLEAA 108 (335)
T ss_dssp CCHHHHHHHHH-HTCEEEECCS----CCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-SSCCEEEESSSSCTTBCHHHH
T ss_pred CCHHHHHHHHh-CCCEEEECCC----CCHHHHHHHhcCceEEEEcCCCCCCHHHHhhC-CCCcEEEECCCCcchhChHHH
Confidence 33444455432 2356666542 46788999999999999987778999999986 899999999999999999999
Q ss_pred HhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCcccccc
Q psy13054 123 KSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEIC 202 (1128)
Q Consensus 123 ~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 202 (1128)
+++||.|+|+|++++++||||++++||++.|+++.+++.++++ .|... ...
T Consensus 109 ~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g-------------~W~~~----------------~~~ 159 (335)
T 2g76_A 109 TRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDG-------------KWERK----------------KFM 159 (335)
T ss_dssp HHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-------------CCCTG----------------GGC
T ss_pred HhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcC-------------CCCcc----------------CCC
Confidence 9999999999999999999999999999999999988877653 33210 011
Q ss_pred ccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCcccc
Q psy13054 203 QKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKW 282 (1128)
Q Consensus 203 ~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~ 282 (1128)
+..+.++++||||+|. ||+.++++++++++.
T Consensus 160 ~~~l~g~tvgIIGlG~---------------------------------IG~~vA~~l~~~G~~---------------- 190 (335)
T 2g76_A 160 GTELNGKTLGILGLGR---------------------------------IGREVATRMQSFGMK---------------- 190 (335)
T ss_dssp BCCCTTCEEEEECCSH---------------------------------HHHHHHHHHHTTTCE----------------
T ss_pred CcCCCcCEEEEEeECH---------------------------------HHHHHHHHHHHCCCE----------------
Confidence 2345678999999973 678888888876543
Q ss_pred ccCCccccceeecccccccc-cccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCcc
Q psy13054 283 RMGSKTDTNHYFGYNWFERS-NGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLL 361 (1128)
Q Consensus 283 ~~g~~~~~~~~~g~~~~~~~-~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lV 361 (1128)
+++|++.... ...+.|+++++++|++++||+|++|||+|++|+++||++.|++||+|++|||+|||++|
T Consensus 191 ----------V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vv 260 (335)
T 2g76_A 191 ----------TIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIV 260 (335)
T ss_dssp ----------EEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSB
T ss_pred ----------EEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCcccc
Confidence 3444433222 23356777789999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHHH
Q psy13054 362 DQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEELF 433 (1128)
Q Consensus 362 De~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~~ 433 (1128)
|++||++||++|+|+||+||||++|| +.++|||++||+ ++|||++++|.+ ...++|+.+|+++..
T Consensus 261 d~~aL~~aL~~g~i~gA~lDV~~~EP-~~~~~L~~~~nv------ilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~ 331 (335)
T 2g76_A 261 DEGALLRALQSGQCAGAALDVFTEEP-PRDRALVDHENV------ISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKS 331 (335)
T ss_dssp CHHHHHHHHHHTSEEEEEESCCSSSS-CSCCHHHHSTTE------EECSSCTTCBHHHHHHHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHHhCCccEEEEeecCCCC-CCCchHHhCCCE------EECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999 678999999999 999999999885 345678888777653
No 46
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=5.4e-49 Score=452.13 Aligned_cols=244 Identities=25% Similarity=0.293 Sum_probs=219.5
Q ss_pred HhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccH
Q psy13054 850 LLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQ 928 (1128)
Q Consensus 850 ~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~ 928 (1128)
.++++++..+. .+++++++|+ + ++||||++.++|+||||+++|+++||.|+|+||+|+.+||||+++++|++.|+.
T Consensus 37 ~l~~ad~li~~~~~~v~~~ll~-~-~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~- 113 (381)
T 3oet_A 37 ELNHADALMVRSVTKVNESLLS-G-TPINFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD- 113 (381)
T ss_dssp HHTTCSEEEECTTSCBSHHHHT-T-SCCCEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT-
T ss_pred HHCCCEEEEECCCCCCCHHHHc-C-CCCEEEEEccccccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc-
Confidence 35566655443 3578999999 4 679999999999999999999999999999999999999999999999999852
Q ss_pred HHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhh
Q psy13054 929 EGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLC 1008 (1128)
Q Consensus 929 ~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell 1008 (1128)
| .+++||||||||+|+||+++|++|++|||+|++||++... ...+....++++++
T Consensus 114 --------g--------------~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~---~~~~~~~~sl~ell 168 (381)
T 3oet_A 114 --------G--------------FSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAA---RGDEGDFRTLDELV 168 (381)
T ss_dssp --------T--------------CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHH---TTCCSCBCCHHHHH
T ss_pred --------C--------------CccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHH---hccCcccCCHHHHH
Confidence 1 2489999999999999999999999999999999864221 12345667999999
Q ss_pred ccCCEEEEecCCCcc----cccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCcc
Q psy13054 1009 AESDFIFVTCALTKD----TEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPL 1084 (1128)
Q Consensus 1009 ~~sDvV~l~lPlt~~----T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL 1084 (1128)
++||+|++|+|++++ |+|+|+++.|++||+|++|||+|||++||++||+++|++|+|+||+||||++||+|. ++|
T Consensus 169 ~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~-~~L 247 (381)
T 3oet_A 169 QEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLN-VAL 247 (381)
T ss_dssp HHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCC-HHH
T ss_pred hhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCc-chh
Confidence 999999999999999 999999999999999999999999999999999999999999999999999999874 679
Q ss_pred ccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q psy13054 1085 VQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEP 1123 (1128)
Q Consensus 1085 ~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~ 1123 (1128)
|.++ +++|||+||+|.|+..++..++++||.+|+.+.+
T Consensus 248 ~~~~-~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~ 285 (381)
T 3oet_A 248 LEAV-DIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQ 285 (381)
T ss_dssp HHHS-SEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred hhCC-EEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9874 8999999999999999999999999999998754
No 47
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=9.7e-50 Score=452.17 Aligned_cols=285 Identities=21% Similarity=0.309 Sum_probs=226.8
Q ss_pred ccchhhhhhhhccC-CceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHH-hccCCCceEEEEcCcccccccH
Q psy13054 42 LLVPESLSKLRFNS-RFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVL-DRSGENLKVIATFSVGHDHLHL 119 (1128)
Q Consensus 42 ~l~~~~l~~l~~~~-~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL-~~~~~~LK~I~~~gvG~DnIDl 119 (1128)
.+.++.++.|+... .+++...+. .+. +.++++|+++++. .++ +++| +++ |+||+|+++|+||||||+
T Consensus 9 ~~~~~~~~~L~~~~~~~~~~~~~~----~~~----~~~~~ad~l~~~~-~~~-~~~l~~~~-~~Lk~I~~~~~G~d~id~ 77 (324)
T 3evt_A 9 ATKPEQLQQLQTTYPDWTFKDAAA----VTA----ADYDQIEVMYGNH-PLL-KTILARPT-NQLKFVQVISAGVDYLPL 77 (324)
T ss_dssp CCCHHHHHHHHHHCTTCEEEETTS----CCT----TTGGGEEEEESCC-THH-HHHHHSTT-CCCCEEECSSSCCTTSCH
T ss_pred CCCHHHHHHHHhhCCCeEEecCCc----cCh----HHhCCcEEEEECC-cCh-HHHHHhhC-CCceEEEECCccccccCH
Confidence 56677777775221 234433221 122 3467899998764 467 9999 554 899999999999999999
Q ss_pred HHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHH-HHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCcc
Q psy13054 120 DEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQR-HNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRK 198 (1128)
Q Consensus 120 ~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ 198 (1128)
++|+++||.|+|+||+++++||||++++||+++|++..+ ++..++ +.|....
T Consensus 78 ~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~-------------~~W~~~~-------------- 130 (324)
T 3evt_A 78 KALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGA-------------RQWALPM-------------- 130 (324)
T ss_dssp HHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTT-------------CCSSCSS--------------
T ss_pred HHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhc-------------CCcccCC--------------
Confidence 999999999999999999999999999999999999987 553322 3453210
Q ss_pred ccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCC
Q psy13054 199 NEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQ 278 (1128)
Q Consensus 199 ~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~ 278 (1128)
.+..+.||++||||+|. ||+.+++++++|++.
T Consensus 131 ---~~~~l~gktvGIiGlG~---------------------------------IG~~vA~~l~~~G~~------------ 162 (324)
T 3evt_A 131 ---TTSTLTGQQLLIYGTGQ---------------------------------IGQSLAAKASALGMH------------ 162 (324)
T ss_dssp ---CCCCSTTCEEEEECCSH---------------------------------HHHHHHHHHHHTTCE------------
T ss_pred ---CCccccCCeEEEECcCH---------------------------------HHHHHHHHHHhCCCE------------
Confidence 12345678999999973 688888988877653
Q ss_pred ccccccCCccccceeeccccccccc-ccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecC
Q psy13054 279 NPKWRMGSKTDTNHYFGYNWFERSN-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSR 357 (1128)
Q Consensus 279 va~~~~g~~~~~~~~~g~~~~~~~~-~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaR 357 (1128)
+++|++..... .....+.+.+|+|++++||+|++|||+|++|+|+||++.|++||+|++|||+||
T Consensus 163 --------------V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aR 228 (324)
T 3evt_A 163 --------------VIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGR 228 (324)
T ss_dssp --------------EEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSC
T ss_pred --------------EEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCC
Confidence 23333322111 001113456899999999999999999999999999999999999999999999
Q ss_pred CCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHH
Q psy13054 358 GGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEE 431 (1128)
Q Consensus 358 G~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~ 431 (1128)
|++|||+||++||++|+|+||+||||++||+|.++|||++||| ++|||++++|.+ ...++|+.+|+++
T Consensus 229 G~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv------ilTPHia~~t~~~~~~~~~~~~~nl~~~l~~ 302 (324)
T 3evt_A 229 GPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDV------LITPHISGQIAHFRATVFPIFAANFAQFVKD 302 (324)
T ss_dssp GGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSE------EECCSCTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCE------EEcCccccChHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999 999999999874 4557899998875
Q ss_pred H
Q psy13054 432 L 432 (1128)
Q Consensus 432 ~ 432 (1128)
.
T Consensus 303 ~ 303 (324)
T 3evt_A 303 G 303 (324)
T ss_dssp S
T ss_pred C
Confidence 4
No 48
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=8e-48 Score=464.35 Aligned_cols=279 Identities=28% Similarity=0.416 Sum_probs=255.4
Q ss_pred CchHHHHHhhccceeEEe-ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHH
Q psy13054 843 IGLETAKLLKAFKVSKIL-YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAI 921 (1128)
Q Consensus 843 ~~~e~~~~l~~~~~~~~~-~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL 921 (1128)
..+++.+.++++++..+. .+++++++|+++ |+||||++.|+|+||+|+++|.++||.|+|+|++|+.+||||++++||
T Consensus 34 ~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l 112 (529)
T 1ygy_A 34 DRDKLLAAVPEADALLVRSATTVDAEVLAAA-PKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLL 112 (529)
T ss_dssp SHHHHHHHGGGCSEEEECSSSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCcEEEECCcCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHH
Confidence 345677778888866554 468999999997 999999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc
Q psy13054 922 AVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL 1001 (1128)
Q Consensus 922 ~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~ 1001 (1128)
++.|+++++++.+++|+|.+. .....+++|+||||||+|+||+.+|++|++|||+|++||++.....+.+.|+..
T Consensus 113 ~~~R~~~~~~~~~~~g~w~~~-----~~~~~~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~ 187 (529)
T 1ygy_A 113 AASRQIPAADASLREHTWKRS-----SFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIEL 187 (529)
T ss_dssp HHHTTHHHHHHHHHTTCCCGG-----GCCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEE
T ss_pred HHHhhhHHHHHHHHhCCCccc-----CcCccccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCcEE
Confidence 999999999999999999731 122348999999999999999999999999999999999876543355668777
Q ss_pred cChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCC
Q psy13054 1002 VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPAD 1081 (1128)
Q Consensus 1002 ~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~ 1081 (1128)
+++++++++||+|++|+|++++|+++++++.++.||+|+++||+|||+++|+++|+++|++|+|+||++|||+.||. ++
T Consensus 188 ~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~-~~ 266 (529)
T 1ygy_A 188 LSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPC-TD 266 (529)
T ss_dssp CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSC-SC
T ss_pred cCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCC-CC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999995 68
Q ss_pred CccccCCCeEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1082 HPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1082 ~pL~~~pNvilTPHiag~t~e~~~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+|||++||+++|||++|+|.++.++++..+++|+.+|+.|+++.|.|
T Consensus 267 ~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~~~~v 313 (529)
T 1ygy_A 267 SPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAV 313 (529)
T ss_dssp CGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred chHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCccc
Confidence 99999999999999999999999999999999999999999876543
No 49
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=3.7e-48 Score=437.29 Aligned_cols=287 Identities=29% Similarity=0.419 Sum_probs=234.9
Q ss_pred chhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHH
Q psy13054 44 VPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIK 123 (1128)
Q Consensus 44 ~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~ 123 (1128)
.++.++.++. ..+++...+ ..+.+++.+.++++|+++++...++++++|+++ |+||+|+++|+|+||||+++|+
T Consensus 13 ~~~~~~~l~~-~~~~~~~~~----~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~ 86 (307)
T 1wwk_A 13 HEKAIQVLKD-AGLEVIYEE----YPDEDRLVELVKDVEAIIVRSKPKVTRRVIESA-PKLKVIARAGVGLDNIDVEAAK 86 (307)
T ss_dssp CHHHHHHHHH-TTCEEEECS----SCCHHHHHHHSTTCSEEEESSCSCBCHHHHTTC-TTCCEEEESSSCCTTBCHHHHH
T ss_pred CHHHHHHHHh-CCeEEEeCC----CCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCeEEEECCccccccCHHHHH
Confidence 3444455532 246665432 246788999999999999876667999999986 8999999999999999999999
Q ss_pred hCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccc
Q psy13054 124 SRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQ 203 (1128)
Q Consensus 124 erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 203 (1128)
++||.|+|+||+++++||||++++||+++|+++.+++.++++ .|... ...+
T Consensus 87 ~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g-------------~w~~~----------------~~~~ 137 (307)
T 1wwk_A 87 EKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREG-------------VWAKK----------------EAMG 137 (307)
T ss_dssp HHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTT-------------CCCTT----------------TCCB
T ss_pred hCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcC-------------CCCcc----------------CcCC
Confidence 999999999999999999999999999999999988766542 34210 0112
Q ss_pred cccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccc
Q psy13054 204 KYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWR 283 (1128)
Q Consensus 204 ~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~ 283 (1128)
..+.++++||||+|. +|+.++++++++++.
T Consensus 138 ~~l~g~~vgIiG~G~---------------------------------IG~~~A~~l~~~G~~----------------- 167 (307)
T 1wwk_A 138 IELEGKTIGIIGFGR---------------------------------IGYQVAKIANALGMN----------------- 167 (307)
T ss_dssp CCCTTCEEEEECCSH---------------------------------HHHHHHHHHHHTTCE-----------------
T ss_pred cccCCceEEEEccCH---------------------------------HHHHHHHHHHHCCCE-----------------
Confidence 345678999999973 677888888776543
Q ss_pred cCCccccceeecccccccc-cccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccC
Q psy13054 284 MGSKTDTNHYFGYNWFERS-NGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLD 362 (1128)
Q Consensus 284 ~g~~~~~~~~~g~~~~~~~-~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVD 362 (1128)
+++|++.... ...+.|+++++++|++++||+|++|+|+|++|+++||++.|++||+|++|||+|||++||
T Consensus 168 ---------V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd 238 (307)
T 1wwk_A 168 ---------ILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVD 238 (307)
T ss_dssp ---------EEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBC
T ss_pred ---------EEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccC
Confidence 3344433222 123457777899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChhh------hHHHHHHHHHH
Q psy13054 363 QEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHPL------VQLDNCEEFFE 430 (1128)
Q Consensus 363 e~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~~------~~~~n~~~~~~ 430 (1128)
++||++||++|+|+||+||||++||++.++|||++||+ ++|||++++|.+. ...+|+.+|++
T Consensus 239 ~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nv------iltPh~~~~t~~~~~~~~~~~~~nl~~~~~ 306 (307)
T 1wwk_A 239 TNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNV------VLTPHIGASTVEAQERAGVEVAEKVVKILK 306 (307)
T ss_dssp HHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTE------EECSSCTTCBHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCE------EECCccccCcHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999 9999999998853 34566666553
No 50
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=2.2e-48 Score=443.43 Aligned_cols=289 Identities=24% Similarity=0.284 Sum_probs=232.9
Q ss_pred hhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCC--ceEEEEcCcccccccHHHHH
Q psy13054 46 ESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGEN--LKVIATFSVGHDHLHLDEIK 123 (1128)
Q Consensus 46 ~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~--LK~I~~~gvG~DnIDl~aa~ 123 (1128)
+.++.+.....+++..++. ..+.+++.+.++++|+++++..+++++++|+++ |+ ||+|+++|+||||||+++|+
T Consensus 14 ~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G~d~id~~~~~ 89 (331)
T 1xdw_A 14 PIFEACNKEFGYDIKCVPD---YLNTKETAEMAAGFDAVILRGNCFANKQNLDIY-KKLGVKYILTRTAGTDHIDKEYAK 89 (331)
T ss_dssp HHHHHHGGGTCCEEEECSC---CSCSHHHHHTTTTCSEEEECTTCCBCHHHHHHH-HHHTCCEEEESSSCCTTBCHHHHH
T ss_pred HHHHHHHHhcCeEEEECCC---CCCHHHHHHHhcCCeEEEEeCCCCCCHHHHhhC-cccCceEEEEccccccccCHHHHH
Confidence 4445543222356666543 234578889999999999987778999999987 66 99999999999999999999
Q ss_pred hCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccc
Q psy13054 124 SRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQ 203 (1128)
Q Consensus 124 erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 203 (1128)
++||.|+|+||+++++||||++++||++.|+++.+++.++++ .| .|.. ...+
T Consensus 90 ~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g-~w----------~~~~-----------------~~~~ 141 (331)
T 1xdw_A 90 ELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKK-NF----------KVDA-----------------FMFS 141 (331)
T ss_dssp HTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTT-CC----------CCCS-----------------TTCC
T ss_pred hCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcC-CC----------cccc-----------------CcCc
Confidence 999999999999999999999999999999999988766543 22 1200 0112
Q ss_pred cccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccc
Q psy13054 204 KYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWR 283 (1128)
Q Consensus 204 ~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~ 283 (1128)
..+.++++||||+|. ||+.++++++++++.
T Consensus 142 ~~l~g~~vgIiG~G~---------------------------------IG~~~A~~l~~~G~~----------------- 171 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGR---------------------------------IGRVAAQIFHGMGAT----------------- 171 (331)
T ss_dssp CCGGGSEEEEECCSH---------------------------------HHHHHHHHHHHTTCE-----------------
T ss_pred cCCCCCEEEEECcCH---------------------------------HHHHHHHHHHHCCCE-----------------
Confidence 235578999999973 678888888777553
Q ss_pred cCCccccceeecccccccccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCH
Q psy13054 284 MGSKTDTNHYFGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQ 363 (1128)
Q Consensus 284 ~g~~~~~~~~~g~~~~~~~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe 363 (1128)
+++|++.......+ .++++++++++++||+|++|||+|++|+|+||++.|++||+|++|||+|||++||+
T Consensus 172 ---------V~~~d~~~~~~~~~-~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~ 241 (331)
T 1xdw_A 172 ---------VIGEDVFEIKGIED-YCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDT 241 (331)
T ss_dssp ---------EEEECSSCCCSCTT-TCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCH
T ss_pred ---------EEEECCCccHHHHh-ccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccH
Confidence 23333322211111 25667999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeeEEEEecCCCCCC--CCC-------C----CcccC-CCCCCCCcccccccCCCCChh------hhHHH
Q psy13054 364 EALVEFLKDKKIGGAGLDVMIPEPL--PAD-------H----PLVQL-DNCGGAGLDVMIPEPLPADHP------LVQLD 423 (1128)
Q Consensus 364 ~AL~~AL~sG~IagAaLDVfe~EPl--~~~-------~----pL~~l-pNvg~~~~~v~tph~~~~t~~------~~~~~ 423 (1128)
+||++||++|+|+||+||||++||+ +.+ + |||++ ||| ++|||++++|.+ ...++
T Consensus 242 ~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nv------ilTPHia~~t~~~~~~~~~~~~~ 315 (331)
T 1xdw_A 242 EAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRV------LITPHLGSYTDEAVKNMVEVSYQ 315 (331)
T ss_dssp HHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTE------EECCSCTTCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCE------EEcCccccChHHHHHHHHHHHHH
Confidence 9999999999999999999999994 333 3 79999 999 999999999985 35678
Q ss_pred HHHHHHHHH
Q psy13054 424 NCEEFFEEL 432 (1128)
Q Consensus 424 n~~~~~~~~ 432 (1128)
|+.+|+++.
T Consensus 316 nl~~~~~g~ 324 (331)
T 1xdw_A 316 NLKDLAETG 324 (331)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHcCC
Confidence 999988875
No 51
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=2e-48 Score=448.59 Aligned_cols=282 Identities=23% Similarity=0.315 Sum_probs=229.1
Q ss_pred CceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCC--CCCCHHHHhccCCCceEEEEcCcccccccHHHHHhC--CcEEEe
Q psy13054 56 RFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPH--QKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSR--GIRVGT 131 (1128)
Q Consensus 56 ~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~--~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~er--GI~V~n 131 (1128)
.+++..++.. ..+.+++.+.++++|++++... .++++++|+++ |+||+|+++|+|+||||+++|+++ ||.|+|
T Consensus 38 ~~~v~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~~~gI~V~n 114 (364)
T 2j6i_A 38 GHELITTSDK--EGGNSVLDQHIPDADIIITTPFHPAYITKERIDKA-KKLKLVVVAGVGSDHIDLDYINQTGKKISVLE 114 (364)
T ss_dssp TCEEEEESCC--SSTTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHHTCCCEEEE
T ss_pred CCEEEEcCCC--CCCHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhC-CCCeEEEECCcccccccHHHHHhcCCCEEEEE
Confidence 4677776532 1245789999999999998542 46999999986 899999999999999999999999 999999
Q ss_pred cCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCcccccccccccccee
Q psy13054 132 VGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAY 211 (1128)
Q Consensus 132 ~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~ 211 (1128)
+|++++++||||++++||++.|++..+++.++++ .| ..... ...+..+.|+++
T Consensus 115 ~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g-~W------------~~~~~--------------~~~~~~l~g~tv 167 (364)
T 2j6i_A 115 VTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINH-DW------------EVAAI--------------AKDAYDIEGKTI 167 (364)
T ss_dssp CTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-CC------------CHHHH--------------HTTCCCSTTCEE
T ss_pred CCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhC-CC------------CcCcc--------------cCCcccCCCCEE
Confidence 9999999999999999999999999988877653 33 21000 001223557889
Q ss_pred eeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccc
Q psy13054 212 LLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTN 291 (1128)
Q Consensus 212 giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~ 291 (1128)
||||+|. ||+.++++++++++.
T Consensus 168 gIIG~G~---------------------------------IG~~vA~~l~~~G~~------------------------- 189 (364)
T 2j6i_A 168 ATIGAGR---------------------------------IGYRVLERLVPFNPK------------------------- 189 (364)
T ss_dssp EEECCSH---------------------------------HHHHHHHHHGGGCCS-------------------------
T ss_pred EEECcCH---------------------------------HHHHHHHHHHhCCCc-------------------------
Confidence 9999873 678888888776542
Q ss_pred eeecccccc--cccccccCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHH
Q psy13054 292 HYFGYNWFE--RSNGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVE 368 (1128)
Q Consensus 292 ~~~g~~~~~--~~~~~~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~ 368 (1128)
++++|++.. .+...+.|++++ +++|++++||+|++|||+|++|+|+||++.|++||+|++|||+|||++||++||++
T Consensus 190 ~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~ 269 (364)
T 2j6i_A 190 ELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAA 269 (364)
T ss_dssp EEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHH
T ss_pred EEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHH
Confidence 023344322 112334566665 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCeeEEEEecCCCCCCCCCCCcccC--C---CCCCCCcccccccCCCCChhh------hHHHHHHHHHHH
Q psy13054 369 FLKDKKIGGAGLDVMIPEPLPADHPLVQL--D---NCGGAGLDVMIPEPLPADHPL------VQLDNCEEFFEE 431 (1128)
Q Consensus 369 AL~sG~IagAaLDVfe~EPl~~~~pL~~l--p---Nvg~~~~~v~tph~~~~t~~~------~~~~n~~~~~~~ 431 (1128)
||++|+|+||+||||++||+|.+||||.+ | || ++|||++++|.+. ...+|+.+|+++
T Consensus 270 aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nv------ilTPHia~~t~e~~~~~~~~~~~nl~~~~~g 337 (364)
T 2j6i_A 270 ALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGN------AMTPHYSGTTLDAQTRYAQGTVNILESFFTG 337 (364)
T ss_dssp HHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCE------EECCSCGGGSHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcE------EECCccCcCCHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999 9 99 9999999998764 234556555543
No 52
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.1e-48 Score=446.30 Aligned_cols=278 Identities=20% Similarity=0.278 Sum_probs=228.6
Q ss_pred CceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCC--ceEEEEcCcccccccHHHHHhCCcEEEecC
Q psy13054 56 RFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGEN--LKVIATFSVGHDHLHLDEIKSRGIRVGTVG 133 (1128)
Q Consensus 56 ~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~--LK~I~~~gvG~DnIDl~aa~erGI~V~n~p 133 (1128)
.+++..++.. ..+++.+.++++|+++++..+++++++|+++ |+ ||+|+++|+||||||+++|+++||.|+|+|
T Consensus 24 ~~~v~~~~~~----~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p 98 (333)
T 1dxy_A 24 GNTLEYHTEF----LDENTVEWAKGFDGINSLQTTPYAAGVFEKM-HAYGIKFLTIRNVGTDNIDMTAMKQYGIRLSNVP 98 (333)
T ss_dssp CCEEEECSSC----CCTTGGGGGTTCSEEEECCSSCBCHHHHHHH-HHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCT
T ss_pred CeEEEEcCCC----ChHHHHHHhcCCeEEEEcCCCCCCHHHHHhC-cccCceEEEEcCcccCccCHHHHHhCCCEEEeCC
Confidence 3567666532 2346778899999999987778999999987 56 999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeee
Q psy13054 134 PVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLL 213 (1128)
Q Consensus 134 g~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~gi 213 (1128)
|+++++||||++++||++.|+++.+++.++++ .|. |.. ...+..+.++++||
T Consensus 99 ~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g-~w~----------~~~-----------------~~~~~~l~g~~vgI 150 (333)
T 1dxy_A 99 AYSPAAIAEFALTDTLYLLRNMGKVQAQLQAG-DYE----------KAG-----------------TFIGKELGQQTVGV 150 (333)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-CHH----------HHT-----------------CCCCCCGGGSEEEE
T ss_pred CCCchHHHHHHHHHHHHHhhhHHHHHHHHHcC-Ccc----------ccc-----------------CCCccCCCCCEEEE
Confidence 99999999999999999999999998877764 341 100 00122355789999
Q ss_pred eeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCcccccee
Q psy13054 214 ISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHY 293 (1128)
Q Consensus 214 iGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~ 293 (1128)
||+|. ||+.++++++++++. +
T Consensus 151 iG~G~---------------------------------IG~~~A~~l~~~G~~--------------------------V 171 (333)
T 1dxy_A 151 MGTGH---------------------------------IGQVAIKLFKGFGAK--------------------------V 171 (333)
T ss_dssp ECCSH---------------------------------HHHHHHHHHHHTTCE--------------------------E
T ss_pred ECcCH---------------------------------HHHHHHHHHHHCCCE--------------------------E
Confidence 99973 678888888877543 2
Q ss_pred ecccccccccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcC
Q psy13054 294 FGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDK 373 (1128)
Q Consensus 294 ~g~~~~~~~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG 373 (1128)
++|++.......+ .+++++++|++++||+|++|||+|++|+|+||++.|++||+|++|||+|||++||++||++||++|
T Consensus 172 ~~~d~~~~~~~~~-~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g 250 (333)
T 1dxy_A 172 IAYDPYPMKGDHP-DFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSG 250 (333)
T ss_dssp EEECSSCCSSCCT-TCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTT
T ss_pred EEECCCcchhhHh-ccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 3344332221112 256679999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEecCCCCCC--C--------CC---CCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHH
Q psy13054 374 KIGGAGLDVMIPEPL--P--------AD---HPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 374 ~IagAaLDVfe~EPl--~--------~~---~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~ 432 (1128)
+|+||+||||++||+ + ++ +|||++||| ++|||++++|.+ ...++|+.+|+++.
T Consensus 251 ~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nv------i~TPHia~~t~e~~~~~~~~~~~nl~~~~~g~ 322 (333)
T 1dxy_A 251 KLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNV------VLSPHIAYYTETAVHNMVYFSLQHLVDFLTKG 322 (333)
T ss_dssp SEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTE------EECSSCTTCSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CccEEEEecCCCCCCcccccccccccCccchhHHhcCCCE------EECCccccChHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999993 1 12 589999999 999999999986 35678999988875
No 53
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.8e-47 Score=433.98 Aligned_cols=293 Identities=25% Similarity=0.348 Sum_probs=239.0
Q ss_pred cchhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCC-ceEEEEcCcccccccHHH
Q psy13054 43 LVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGEN-LKVIATFSVGHDHLHLDE 121 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~-LK~I~~~gvG~DnIDl~a 121 (1128)
+.++.++.++ +.+++..++. ....+.+++.+.++++|+++++..+++++++|+++ |+ ||+|+++|+||||||+++
T Consensus 10 ~~~~~~~~l~--~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~Lk~I~~~~~G~d~id~~~ 85 (320)
T 1gdh_A 10 LPEAAMARAR--ESYDVIAHGD-DPKITIDEMIETAKSVDALLITLNEKCRKEVIDRI-PENIKCISTYSIGFDHIDLDA 85 (320)
T ss_dssp CCHHHHHHHH--TTSEEEECCS-TTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHS-CTTCCEEEEESSCCTTBCHHH
T ss_pred CCHHHHHHHH--hcCCEEEecC-CCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHHhC-CccceEEEECCcccccccHHH
Confidence 4455566654 4567766543 22356789999999999999876678999999987 67 999999999999999999
Q ss_pred HHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccc
Q psy13054 122 IKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEI 201 (1128)
Q Consensus 122 a~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 201 (1128)
|+++||.|+|+||+++++||||++++||++.|+++.+++.++++ .|..... ...
T Consensus 86 ~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g-------------~w~~~~~-------------~~~ 139 (320)
T 1gdh_A 86 CKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTR-------------SWPGWEP-------------LEL 139 (320)
T ss_dssp HHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-------------CCCCCCT-------------TTT
T ss_pred HHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcC-------------CCCcccc-------------ccc
Confidence 99999999999999999999999999999999999988877653 2321000 001
Q ss_pred cccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccc
Q psy13054 202 CQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPK 281 (1128)
Q Consensus 202 ~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~ 281 (1128)
.+..+.++++||||+|. ||+.++++++++++.
T Consensus 140 ~~~~l~g~~vgIIG~G~---------------------------------IG~~~A~~l~~~G~~--------------- 171 (320)
T 1gdh_A 140 VGEKLDNKTLGIYGFGS---------------------------------IGQALAKRAQGFDMD--------------- 171 (320)
T ss_dssp CBCCCTTCEEEEECCSH---------------------------------HHHHHHHHHHTTTCE---------------
T ss_pred cCcCCCCCEEEEECcCH---------------------------------HHHHHHHHHHHCCCE---------------
Confidence 12335678999999873 677888888776542
Q ss_pred cccCCccccceeecccc-cccc-cccccCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCC
Q psy13054 282 WRMGSKTDTNHYFGYNW-FERS-NGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRG 358 (1128)
Q Consensus 282 ~~~g~~~~~~~~~g~~~-~~~~-~~~~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG 358 (1128)
+++|++ .... ...+.|++++ +++|++++||+|++|+|+|++|+++|+++.|++||+|++|||+|||
T Consensus 172 -----------V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg 240 (320)
T 1gdh_A 172 -----------IDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARG 240 (320)
T ss_dssp -----------EEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred -----------EEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence 334444 2221 1234577777 8999999999999999999999999999999999999999999999
Q ss_pred CccCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHH
Q psy13054 359 GLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 359 ~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~ 432 (1128)
++||+++|.++|++|+|+||+||||++|| +.++|||++||+ ++|||++++|.+ ... +|+.+|+++.
T Consensus 241 ~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nv------iltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~ 312 (320)
T 1gdh_A 241 DLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNT------FLFPHIGSAATQAREDMAHQA-NDLIDALFGG 312 (320)
T ss_dssp GGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTE------EECSSCTTCBHHHHHHHHHHH-HHHHHHHHTT
T ss_pred cccCHHHHHHHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCE------EECCcCCcCcHHHHHHHHHHH-HHHHHHHcCC
Confidence 99999999999999999999999999999 889999999999 999999999885 344 7777777653
No 54
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=2.5e-48 Score=443.30 Aligned_cols=277 Identities=18% Similarity=0.236 Sum_probs=226.7
Q ss_pred CceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCC--ceEEEEcCcccccccHHHHHhCCcEEEecC
Q psy13054 56 RFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGEN--LKVIATFSVGHDHLHLDEIKSRGIRVGTVG 133 (1128)
Q Consensus 56 ~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~--LK~I~~~gvG~DnIDl~aa~erGI~V~n~p 133 (1128)
.+++..++.. ..+++.+.++++|+++++..+++++++|+++ |+ ||+|+++|+||||||+++|+++||.|+|+|
T Consensus 26 ~~~v~~~~~~----~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~~~Lk~I~~~~~G~d~id~~~~~~~gi~v~n~p 100 (333)
T 1j4a_A 26 DVEVEYTDKL----LTPETVALAKGADGVVVYQQLDYIAETLQAL-ADNGITKMSLRNVGVDNIDMAKAKELGFQITNVP 100 (333)
T ss_dssp TSEEEECSSC----CCTTTGGGGTTCSEEEECCSSCBCHHHHHHH-HHTTCCEEEESSSCCTTBCHHHHHHTTCEEECCC
T ss_pred CcEEEECCCC----CcHHHHHHhcCCcEEEEcCCCCCCHHHHHhc-cccCCeEEEECCcccccccHHHHHhCCCEEEeCC
Confidence 4577766531 2346778899999999977678999999987 56 999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeee
Q psy13054 134 PVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLL 213 (1128)
Q Consensus 134 g~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~gi 213 (1128)
|+++++||||++++||+++|++..+++.++++ .| .|.. ..+..+.++++||
T Consensus 101 ~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g-~w----------~~~~------------------~~~~~l~g~~vgI 151 (333)
T 1j4a_A 101 VYSPNAIAEHAAIQAARILRQDKAMDEKVARH-DL----------RWAP------------------TIGREVRDQVVGV 151 (333)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-BC----------CCTT------------------CCBCCGGGSEEEE
T ss_pred CCCchHHHHHHHHHHHHHHcCHHHHHHHHHcC-CC----------ccCC------------------cccccCCCCEEEE
Confidence 99999999999999999999999988877653 22 1210 0122355788999
Q ss_pred eeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCcccccee
Q psy13054 214 ISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHY 293 (1128)
Q Consensus 214 iGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~ 293 (1128)
||+|. ||+.++++++++++. +
T Consensus 152 iG~G~---------------------------------IG~~~A~~l~~~G~~--------------------------V 172 (333)
T 1j4a_A 152 VGTGH---------------------------------IGQVFMQIMEGFGAK--------------------------V 172 (333)
T ss_dssp ECCSH---------------------------------HHHHHHHHHHHTTCE--------------------------E
T ss_pred EccCH---------------------------------HHHHHHHHHHHCCCE--------------------------E
Confidence 99973 677888888776543 2
Q ss_pred ecccccccccccccCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHc
Q psy13054 294 FGYNWFERSNGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKD 372 (1128)
Q Consensus 294 ~g~~~~~~~~~~~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~s 372 (1128)
++|++.......+. ++++ +++|++++||+|++|+|+|++|+++||++.|++||+|++|||+|||++||++||++||++
T Consensus 173 ~~~d~~~~~~~~~~-~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~ 251 (333)
T 1j4a_A 173 ITYDIFRNPELEKK-GYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDS 251 (333)
T ss_dssp EEECSSCCHHHHHT-TCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred EEECCCcchhHHhh-CeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 33443322111122 5566 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEecCCCCC--CCCCC-----------CcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHH
Q psy13054 373 KKIGGAGLDVMIPEP--LPADH-----------PLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 373 G~IagAaLDVfe~EP--l~~~~-----------pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~ 432 (1128)
|+|+||+||||++|| +|.+| |||++||| ++|||++++|.+ ...++|+.+|+++.
T Consensus 252 g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nv------ilTPHia~~t~~~~~~~~~~~~~nl~~~~~g~ 324 (333)
T 1j4a_A 252 GKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNV------LVTPKTAFYTTHAVRNMVVKAFDNNLELVEGK 324 (333)
T ss_dssp TSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTE------EECSSCTTCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCE------EECCccccCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999 45554 69999999 999999999885 34567777777653
No 55
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1.1e-47 Score=444.60 Aligned_cols=284 Identities=21% Similarity=0.291 Sum_probs=232.2
Q ss_pred CceEEEcCCCCCCCCHHHHHHhcCCceEEEeCC--CCCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEecC
Q psy13054 56 RFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNP--HQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVG 133 (1128)
Q Consensus 56 ~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~--~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~p 133 (1128)
.+++.+.... ..+.+++.+.++++|++++.. ..++++++|+++ |+||+|+++|+|+||||+++|+++||.|+|+|
T Consensus 67 g~~v~~~~~~--~~~~~~l~~~l~~ad~li~~~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~d~iD~~aa~~~gI~V~n~~ 143 (393)
T 2nac_A 67 GHTLVVTSDK--DGPDSVFERELVDADVVISQPFWPAYLTPERIAKA-KNLKLALTAGIGSDHVDLQSAIDRNVTVAEVT 143 (393)
T ss_dssp TCEEEEESCC--SSTTSHHHHHHTTCSEEEEBTTBCCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHTTCEEEECT
T ss_pred CCEEEEecCC--CCCHHHHHHhccCCCEEEEcCccCCCCCHHHHhhC-CCCcEEEEcCccccccCHHHHhcCCEEEEeCC
Confidence 3566653321 224567899999999999853 347999999986 89999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeee
Q psy13054 134 PVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLL 213 (1128)
Q Consensus 134 g~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~gi 213 (1128)
++++++||||++++||++.|++..++++++++ .| ..... ...+..+.||++||
T Consensus 144 g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g-~W------------~~~~~--------------~~~~~~l~gktvGI 196 (393)
T 2nac_A 144 YCNSISVAEHVVMMILSLVRNYLPSHEWARKG-GW------------NIADC--------------VSHAYDLEAMHVGT 196 (393)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-CC------------CHHHH--------------HTTCCCCTTCEEEE
T ss_pred CcccHHHHHHHHHHHHHHHhccHHHHHHHHcC-CC------------Ccccc--------------ccCCccCCCCEEEE
Confidence 99999999999999999999999988877653 23 21000 00112355789999
Q ss_pred eeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCcccccee
Q psy13054 214 ISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHY 293 (1128)
Q Consensus 214 iGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~ 293 (1128)
||+|. ||+.+++++++|++. +
T Consensus 197 IGlG~---------------------------------IG~~vA~~l~a~G~~--------------------------V 217 (393)
T 2nac_A 197 VAAGR---------------------------------IGLAVLRRLAPFDVH--------------------------L 217 (393)
T ss_dssp ECCSH---------------------------------HHHHHHHHHGGGTCE--------------------------E
T ss_pred EeECH---------------------------------HHHHHHHHHHhCCCE--------------------------E
Confidence 99973 678888888876543 3
Q ss_pred eccccccc--ccccccCCcc-cCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHH
Q psy13054 294 FGYNWFER--SNGTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFL 370 (1128)
Q Consensus 294 ~g~~~~~~--~~~~~~g~~~-vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL 370 (1128)
+++++... +...+.|+++ .+++|++++||+|++|||+|++|+|+||++.|++||+|++|||+|||++||++||++||
T Consensus 218 ~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 297 (393)
T 2nac_A 218 HYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARAL 297 (393)
T ss_dssp EEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred EEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHH
Confidence 33443321 1133456666 48999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHHHH
Q psy13054 371 KDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEELFD 434 (1128)
Q Consensus 371 ~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~~~ 434 (1128)
++|+|+||+||||++||++.+||||++||| ++|||++++|.+ ....+|+.+|+++...
T Consensus 298 ~~g~i~gA~lDV~~~EP~~~~~pL~~~~nv------ilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~ 361 (393)
T 2nac_A 298 ESGRLAGYAGDVWFPQPAPKDHPWRTMPYN------GMTPHISGTTLTAQARYAAGTREILECFFEGRPI 361 (393)
T ss_dssp HTTSEEEEEESCCSSSSCCTTCGGGTSTTB------CCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HcCCeeEEEEEecCCCCCCCCChhHcCCCE------EECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999 999999999975 3456888888776533
No 56
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-47 Score=442.31 Aligned_cols=234 Identities=24% Similarity=0.341 Sum_probs=216.0
Q ss_pred cCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCcc
Q psy13054 862 TSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWAL 941 (1128)
Q Consensus 862 ~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~ 941 (1128)
+++++++|+ + |+||||++.++|+||+|+++|+++||.|+|+||+|+.+||||+++++|++.|+ |.
T Consensus 47 ~~~~~~~l~-~-~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~------------~~- 111 (380)
T 2o4c_A 47 TEVSRAALA-G-SPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEV------------RG- 111 (380)
T ss_dssp SCBCHHHHT-T-SCCCEEEECSSCSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHH------------HT-
T ss_pred CCCCHHHhc-C-CCceEEEEcCcccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhh------------hh-
Confidence 478999999 6 99999999999999999999999999999999999999999999999999986 21
Q ss_pred ccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCC
Q psy13054 942 KQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 942 ~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt 1021 (1128)
.+++|+||||||+|+||+.+|++|++|||+|++||++.... ..+....++++++++||+|++|+|++
T Consensus 112 ----------~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~g~~~~~l~ell~~aDvV~l~~Plt 178 (380)
T 2o4c_A 112 ----------ADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR---EPDGEFVSLERLLAEADVISLHTPLN 178 (380)
T ss_dssp ----------CCGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH---STTSCCCCHHHHHHHCSEEEECCCCC
T ss_pred ----------cccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh---ccCcccCCHHHHHHhCCEEEEeccCc
Confidence 15899999999999999999999999999999998644321 23455679999999999999999999
Q ss_pred cc----cccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCC
Q psy13054 1022 KD----TEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTS 1097 (1128)
Q Consensus 1022 ~~----T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHia 1097 (1128)
++ |+++|+++.|++||+|++|||+|||+++|++||+++|++|+|.||+||||++||++ +++|+. +||++|||+|
T Consensus 179 ~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~-~~~l~~-~nvi~TPHia 256 (380)
T 2o4c_A 179 RDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQA-DPELAA-RCLIATPHIA 256 (380)
T ss_dssp SSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHT-TCSEECSSCT
T ss_pred cccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCC-chhhcc-CCEEEccccC
Confidence 99 99999999999999999999999999999999999999999999999999999965 567887 5999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q psy13054 1098 SATKAVRDEKSSTSAENIIRGYKGEPMI 1125 (1128)
Q Consensus 1098 g~t~e~~~~~~~~~~~nl~~~l~G~~l~ 1125 (1128)
|+|.++..++.+++++|+.+|+.|++..
T Consensus 257 g~t~e~~~~~~~~~~~nl~~~l~g~~~~ 284 (380)
T 2o4c_A 257 GYSLEGKLRGTAQIYQAYCAWRGIAERV 284 (380)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 9999999999999999999999998743
No 57
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.9e-47 Score=428.53 Aligned_cols=286 Identities=22% Similarity=0.347 Sum_probs=236.0
Q ss_pred chhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHH
Q psy13054 44 VPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIK 123 (1128)
Q Consensus 44 ~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~ 123 (1128)
.++.++.++. ..+++...+ ..+.+++.+.++++|+++++...++++++|+++ |+||+|+++|+|+||||+++|+
T Consensus 15 ~~~~~~~l~~-~~~~v~~~~----~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~ 88 (313)
T 2ekl_A 15 DEILIKTLRE-KGIQVDYMP----EISKEELLNIIGNYDIIVVRSRTKVTKDVIEKG-KKLKIIARAGIGLDNIDTEEAE 88 (313)
T ss_dssp CHHHHHHHHH-TTCEEEECT----TCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-TTCCEEEECSSCCTTBCHHHHH
T ss_pred CHHHHHHHHh-CCcEEEeCC----CCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEEcCCCCCccCHHHHH
Confidence 3444555542 235664321 246788999999999999876678999999986 8999999999999999999999
Q ss_pred hCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccc
Q psy13054 124 SRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQ 203 (1128)
Q Consensus 124 erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 203 (1128)
++||.|+|+||+++++||||++++||++.|+++.+++.++++ .|.. ..+
T Consensus 89 ~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g-------------~w~~------------------~~~ 137 (313)
T 2ekl_A 89 KRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSG-------------IFKK------------------IEG 137 (313)
T ss_dssp HTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-------------CCCC------------------CCC
T ss_pred hCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcC-------------CCCC------------------CCC
Confidence 999999999999999999999999999999999988877653 3320 011
Q ss_pred cccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccc
Q psy13054 204 KYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWR 283 (1128)
Q Consensus 204 ~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~ 283 (1128)
..+.|+++||||+|. +|+.++++++++++.
T Consensus 138 ~~l~g~~vgIIG~G~---------------------------------IG~~~A~~l~~~G~~----------------- 167 (313)
T 2ekl_A 138 LELAGKTIGIVGFGR---------------------------------IGTKVGIIANAMGMK----------------- 167 (313)
T ss_dssp CCCTTCEEEEESCSH---------------------------------HHHHHHHHHHHTTCE-----------------
T ss_pred CCCCCCEEEEEeeCH---------------------------------HHHHHHHHHHHCCCE-----------------
Confidence 234578899999873 577888888776543
Q ss_pred cCCccccceeecccccccc-cccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccC
Q psy13054 284 MGSKTDTNHYFGYNWFERS-NGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLD 362 (1128)
Q Consensus 284 ~g~~~~~~~~~g~~~~~~~-~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVD 362 (1128)
+++|++.... ...+.|++++++++++++||+|++|+|+|++|+++||++.|++||+|++|||+|||++||
T Consensus 168 ---------V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd 238 (313)
T 2ekl_A 168 ---------VLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVN 238 (313)
T ss_dssp ---------EEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBC
T ss_pred ---------EEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccC
Confidence 2334433221 123457777899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCeeEEEEecCCCCCCCCCC---CcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHH
Q psy13054 363 QEALVEFLKDKKIGGAGLDVMIPEPLPADH---PLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 363 e~AL~~AL~sG~IagAaLDVfe~EPl~~~~---pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~ 432 (1128)
++||.+||++|+|+||+||||++||++ ++ |||++||| ++|||++++|.+ ....+|+.+|+++.
T Consensus 239 ~~aL~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nv------iltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~ 310 (313)
T 2ekl_A 239 GKALLDYIKKGKVYAYATDVFWNEPPK-EEWELELLKHERV------IVTTHIGAQTKEAQKRVAEMTTQNLLNAMKEL 310 (313)
T ss_dssp HHHHHHHHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTE------EECCSCTTCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCE------EECCccCcCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999987 66 99999999 999999999975 45678888888764
No 58
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=8.1e-47 Score=426.91 Aligned_cols=288 Identities=29% Similarity=0.430 Sum_probs=233.7
Q ss_pred chhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHH
Q psy13054 44 VPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIK 123 (1128)
Q Consensus 44 ~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~ 123 (1128)
.++.++.++. ..+++..++.. ..+.+++.+.++++|+++++..+++++++|+++ |+||+|+++|+||||||+++|+
T Consensus 10 ~~~~~~~l~~-~g~~v~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~id~~~~~ 85 (311)
T 2cuk_A 10 PGKALDRLRE-RGLEVEVHRGL--FLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRA-KGLKVIACYSVGVDHVDLEAAR 85 (311)
T ss_dssp SSSTTHHHHH-TTCEEEECCSS--CCCHHHHHHHHTTCSEEECCTTSCBCHHHHHHS-TTCCEEECSSSCCTTBCHHHHH
T ss_pred CHHHHHHHHh-cCCeEEEecCC--CCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCcCccccCHHHHH
Confidence 3344455431 22677765432 346788999999999999876678999999986 8999999999999999999999
Q ss_pred hCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccc
Q psy13054 124 SRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQ 203 (1128)
Q Consensus 124 erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 203 (1128)
++||.|+|+||+++++||||++++||++.|+++.+++.++++ .|..... ....+
T Consensus 86 ~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g-------------~w~~~~~-------------~~~~~ 139 (311)
T 2cuk_A 86 ERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDG-------------LWKAWHP-------------ELLLG 139 (311)
T ss_dssp TTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-------------CCCCCCT-------------TTTCB
T ss_pred hCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcC-------------CCCcccc-------------ccccC
Confidence 999999999999999999999999999999999988877653 2321000 00112
Q ss_pred cccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccc
Q psy13054 204 KYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWR 283 (1128)
Q Consensus 204 ~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~ 283 (1128)
..+.++++||||+|. +|+.++++++++++.
T Consensus 140 ~~l~g~~vgIIG~G~---------------------------------IG~~~A~~l~~~G~~----------------- 169 (311)
T 2cuk_A 140 LDLQGLTLGLVGMGR---------------------------------IGQAVAKRALAFGMR----------------- 169 (311)
T ss_dssp CCCTTCEEEEECCSH---------------------------------HHHHHHHHHHHTTCE-----------------
T ss_pred cCCCCCEEEEEEECH---------------------------------HHHHHHHHHHHCCCE-----------------
Confidence 235678899999873 577888888766542
Q ss_pred cCCccccceeecccccccccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCH
Q psy13054 284 MGSKTDTNHYFGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQ 363 (1128)
Q Consensus 284 ~g~~~~~~~~~g~~~~~~~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe 363 (1128)
++++++...... +.+.+++|++++||+|++|+|+|++|+++|+++.|++||+|++|||+|||++||+
T Consensus 170 ---------V~~~d~~~~~~~----~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~ 236 (311)
T 2cuk_A 170 ---------VVYHARTPKPLP----YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDT 236 (311)
T ss_dssp ---------EEEECSSCCSSS----SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCH
T ss_pred ---------EEEECCCCcccc----cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCH
Confidence 233443322211 3466999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHH
Q psy13054 364 EALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEE 431 (1128)
Q Consensus 364 ~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~ 431 (1128)
+||++||+ |+|+||+||||++||++.++|||++||+ ++|||++++|.+ ....+|+.+|+++
T Consensus 237 ~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nv------iltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 303 (311)
T 2cuk_A 237 EALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNA------VITPHIGSAGRTTRERMAEVAVENLLAVLEG 303 (311)
T ss_dssp HHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTE------EECCSCTTCBHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCE------EECCcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999 9999999999999999999999999999 999999999875 3456777776654
No 59
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=7.9e-46 Score=422.06 Aligned_cols=287 Identities=25% Similarity=0.368 Sum_probs=232.1
Q ss_pred cchhhhhhhhccCCceEEEcCCCCCCCCHHH-HHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHH
Q psy13054 43 LVPESLSKLRFNSRFDIDTYPVSEGRMPRDI-FIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDE 121 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~~v~~~~~~~~~~~~ee-l~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~a 121 (1128)
+.++.++.++ +.+++..++.. .+.++ +.+.++++|+++++..+++++++|+++ |+||+|+++|+||||||+++
T Consensus 32 ~~~~~~~~l~--~~~~~~~~~~~---~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-p~Lk~I~~~~~G~d~id~~~ 105 (333)
T 3ba1_A 32 MSTYLEQELD--KRFKLFRYWTQ---PAQRDFLALQAESIRAVVGNSNAGADAELIDAL-PKLEIVSSFSVGLDKVDLIK 105 (333)
T ss_dssp CCHHHHHHHH--HHSEEEEGGGC---SSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHC-TTCCEEEESSSCCTTBCHHH
T ss_pred CCHHHHHHHH--hcCCEEEecCC---CChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhC-CCCcEEEEcCccccccCHHH
Confidence 4455566654 34677665421 13444 667789999999877778999999986 89999999999999999999
Q ss_pred HHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccc
Q psy13054 122 IKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEI 201 (1128)
Q Consensus 122 a~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 201 (1128)
|+++||.|+|+||+++++||||++++||+++|++..+++.++++ .| .... ..
T Consensus 106 ~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g-~w------------~~~~---------------~~ 157 (333)
T 3ba1_A 106 CEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRG-AW------------KFGD---------------FK 157 (333)
T ss_dssp HHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-GG------------GGCC---------------CC
T ss_pred HHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcC-CC------------Cccc---------------cc
Confidence 99999999999999999999999999999999999998877763 34 1000 00
Q ss_pred cccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccc
Q psy13054 202 CQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPK 281 (1128)
Q Consensus 202 ~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~ 281 (1128)
.+..+.++++||||+|. +|+.+++.+.++++.
T Consensus 158 ~~~~l~g~~vgIIG~G~---------------------------------iG~~vA~~l~~~G~~--------------- 189 (333)
T 3ba1_A 158 LTTKFSGKRVGIIGLGR---------------------------------IGLAVAERAEAFDCP--------------- 189 (333)
T ss_dssp CCCCCTTCCEEEECCSH---------------------------------HHHHHHHHHHTTTCC---------------
T ss_pred cccccCCCEEEEECCCH---------------------------------HHHHHHHHHHHCCCE---------------
Confidence 12235568899999873 577888888776543
Q ss_pred cccCCccccceeecccccccccccccCCc-ccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCc
Q psy13054 282 WRMGSKTDTNHYFGYNWFERSNGTALGAQ-LVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL 360 (1128)
Q Consensus 282 ~~~g~~~~~~~~~g~~~~~~~~~~~~g~~-~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~l 360 (1128)
++++++..... .++. +.+++|++++||+|++|+|++++|+++||++.|++||+|++|||+|||.+
T Consensus 190 -----------V~~~dr~~~~~---~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~ 255 (333)
T 3ba1_A 190 -----------ISYFSRSKKPN---TNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPH 255 (333)
T ss_dssp -----------EEEECSSCCTT---CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred -----------EEEECCCchhc---cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence 23333322111 1333 45899999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHH
Q psy13054 361 LDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 361 VDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~ 432 (1128)
+|+++|+++|++|+|+||+||||++||++. +||+.+||| ++|||++++|.+ ...++|+.+|+++.
T Consensus 256 vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nv------iltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~ 326 (333)
T 3ba1_A 256 VDEPELVSALVEGRLGGAGLDVFEREPEVP-EKLFGLENV------VLLPHVGSGTVETRKVMADLVVGNLEAHFSGK 326 (333)
T ss_dssp BCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGGGGCTTE------EECSSCTTCSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chhhcCCCE------EECCcCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999766 999999999 999999999975 34678888887754
No 60
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=3.2e-46 Score=422.00 Aligned_cols=254 Identities=17% Similarity=0.181 Sum_probs=208.6
Q ss_pred cCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccc-c-HHH---HHhCCcEEEecCCCC-chhHHHHHHHHHHHH
Q psy13054 78 LKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHL-H-LDE---IKSRGIRVGTVGPVS-SDTVAEYNIGLAIAV 151 (1128)
Q Consensus 78 l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnI-D-l~a---a~erGI~V~n~pg~~-~~aVAE~alalmL~l 151 (1128)
.+++|+++++. .++++|++ |+||+|+++|+|+||| | +++ +.++||.|+|+|+++ +++||||++++||++
T Consensus 39 ~~~ad~~i~~~---~~~~~l~~--~~Lk~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~ 113 (315)
T 3pp8_A 39 NNPADYALVWQ---PPVEMLAG--RRLKAVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHW 113 (315)
T ss_dssp CSCCSEEEESS---CCHHHHTT--CCCSEEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHH
T ss_pred ccCcEEEEECC---CCHHHhCC--CCceEEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHH
Confidence 46999999864 58999996 7999999999999999 8 998 788999999999875 899999999999999
Q ss_pred hhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeeeeeccccccCCCCCccccc
Q psy13054 152 SRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRM 231 (1128)
Q Consensus 152 ~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~i 231 (1128)
.|++..+++.+++ +.|... .+..+.||++||||+|.
T Consensus 114 ~R~~~~~~~~~~~-------------g~W~~~------------------~~~~l~g~tvGIiG~G~------------- 149 (315)
T 3pp8_A 114 FRRFDDYQALKNQ-------------ALWKPL------------------PEYTREEFSVGIMGAGV------------- 149 (315)
T ss_dssp HTTHHHHHHHHHT-------------TCCCCC------------------CCCCSTTCCEEEECCSH-------------
T ss_pred HhCChHHHHHHHh-------------cccCCC------------------CCCCcCCCEEEEEeeCH-------------
Confidence 9999998876654 234311 01235578999999973
Q ss_pred CCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccceeeccccccccc--ccccCC
Q psy13054 232 GSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERSN--GTALGA 309 (1128)
Q Consensus 232 g~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~~--~~~~g~ 309 (1128)
||+.+++++++|++. +++|++..... .... .
T Consensus 150 --------------------IG~~vA~~l~~~G~~--------------------------V~~~dr~~~~~~~~~~~-~ 182 (315)
T 3pp8_A 150 --------------------LGAKVAESLQAWGFP--------------------------LRCWSRSRKSWPGVESY-V 182 (315)
T ss_dssp --------------------HHHHHHHHHHTTTCC--------------------------EEEEESSCCCCTTCEEE-E
T ss_pred --------------------HHHHHHHHHHHCCCE--------------------------EEEEcCCchhhhhhhhh-c
Confidence 688889988887653 23333222111 0000 1
Q ss_pred cccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCCC
Q psy13054 310 QLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLP 389 (1128)
Q Consensus 310 ~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~ 389 (1128)
...+|+|++++||||++|||+|++|+|+||++.|++||+|++|||+|||++|||+||++||++|+|+||+||||++||+|
T Consensus 183 ~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~ 262 (315)
T 3pp8_A 183 GREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLP 262 (315)
T ss_dssp SHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCC
T ss_pred ccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCC
Confidence 12589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCCCCcccccccCCCCChh----hhHHHHHHHHHHHHH
Q psy13054 390 ADHPLVQLDNCGGAGLDVMIPEPLPADHP----LVQLDNCEEFFEELF 433 (1128)
Q Consensus 390 ~~~pL~~lpNvg~~~~~v~tph~~~~t~~----~~~~~n~~~~~~~~~ 433 (1128)
.+||||++||| ++|||++++|.+ ....+|+.+|+++..
T Consensus 263 ~~~pL~~~~nv------ilTPHia~~t~~~~~~~~~~~ni~~~~~G~~ 304 (315)
T 3pp8_A 263 QESPLWRHPRV------AMTPHIAAVTRPAEAIDYISRTITQLEKGEP 304 (315)
T ss_dssp TTCGGGGCTTE------EECSSCSSCCCHHHHHHHHHHHHHHHHHTCC
T ss_pred CCChhhcCCCE------EECCCCCcccHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999 999999999874 345678888777653
No 61
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=4.2e-46 Score=428.11 Aligned_cols=262 Identities=20% Similarity=0.237 Sum_probs=215.3
Q ss_pred CCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEecCC
Q psy13054 55 SRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGP 134 (1128)
Q Consensus 55 ~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~pg 134 (1128)
...++.+++. ...+. +.++++|++++++.+++++++|+ . ++||+|+++|+|+||||+++|+++||.|+|+||
T Consensus 21 ~~~~v~~~~~--~~~~~----~~l~~ad~li~~~~~~v~~~ll~-~-~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~pg 92 (381)
T 3oet_A 21 RLGEVKAVPG--RPIPV----EELNHADALMVRSVTKVNESLLS-G-TPINFVGTATAGTDHVDEAWLKQAGIGFSAAPG 92 (381)
T ss_dssp TSSEEEEECC-----CH----HHHTTCSEEEECTTSCBSHHHHT-T-SCCCEEEESSSCCTTBCHHHHHHTTCEEECCTT
T ss_pred hCCcEEEeCC--CCCCH----HHHCCCEEEEECCCCCCCHHHHc-C-CCCEEEEEccccccccCHHHHHhCCEEEEECCC
Confidence 3457777653 12333 34789999999887889999999 3 579999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeeee
Q psy13054 135 VSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLI 214 (1128)
Q Consensus 135 ~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~gii 214 (1128)
+|+++||||++++||+++|+.. ..+.||++|||
T Consensus 93 ~~~~~VAE~~l~~lL~l~r~~g-----------------------------------------------~~l~gktvGII 125 (381)
T 3oet_A 93 CNAIAVVEYVFSALLMLAERDG-----------------------------------------------FSLRDRTIGIV 125 (381)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTT-----------------------------------------------CCGGGCEEEEE
T ss_pred cCcchhHHHHHHHHHHHHHhcC-----------------------------------------------CccCCCEEEEE
Confidence 9999999999999999998531 01346889999
Q ss_pred eccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccceee
Q psy13054 215 SLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYF 294 (1128)
Q Consensus 215 Glg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~ 294 (1128)
|+|. ||+.++++++++++. ++
T Consensus 126 GlG~---------------------------------IG~~vA~~l~a~G~~--------------------------V~ 146 (381)
T 3oet_A 126 GVGN---------------------------------VGSRLQTRLEALGIR--------------------------TL 146 (381)
T ss_dssp CCSH---------------------------------HHHHHHHHHHHTTCE--------------------------EE
T ss_pred eECH---------------------------------HHHHHHHHHHHCCCE--------------------------EE
Confidence 9973 688889988877543 34
Q ss_pred cccccccccccccCCcccCHHHHhhcCCEEEEecCCCcc----cccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHH
Q psy13054 295 GYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKD----TEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFL 370 (1128)
Q Consensus 295 g~~~~~~~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~----T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL 370 (1128)
+|++..... ..+..+.+++|++++||||++|||+|++ |+||||++.|++||||++|||+|||++|||+||++||
T Consensus 147 ~~d~~~~~~--~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL 224 (381)
T 3oet_A 147 LCDPPRAAR--GDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARL 224 (381)
T ss_dssp EECHHHHHT--TCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred EECCChHHh--ccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHH
Confidence 455422111 1345678999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHHHHhhhccC
Q psy13054 371 KDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEELFDKNFQSI 440 (1128)
Q Consensus 371 ~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~~~~~~~~~ 440 (1128)
++|+|+||+||||++||++ +++|+.++ + ++|||++++|.+ .+.++|+.+|+.+.....+..+
T Consensus 225 ~~g~i~gA~LDV~e~EP~~-~~~L~~~~-~------i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 292 (381)
T 3oet_A 225 NAGQPLSVVLDVWEGEPDL-NVALLEAV-D------IGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQRVALETL 292 (381)
T ss_dssp HTTCCEEEEESCCTTTTSC-CHHHHHHS-S------EECSSCTTCCHHHHHHHHHHHHHHHHHHTTCCCCCCHHHH
T ss_pred HhCCCeEEEeeccccCCCC-cchhhhCC-E------EECCccCcCcHHHHHHHHHHHHHHHHHHHcCCcccccccc
Confidence 9999999999999999976 45688775 6 799999999985 4567888888876555454433
No 62
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=2.1e-45 Score=420.53 Aligned_cols=286 Identities=21% Similarity=0.267 Sum_probs=229.5
Q ss_pred CCceEEEcCCCCCCCCHHHHHHhc-CCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEecC
Q psy13054 55 SRFDIDTYPVSEGRMPRDIFIEKL-KGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVG 133 (1128)
Q Consensus 55 ~~~~v~~~~~~~~~~~~eel~~~l-~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~p 133 (1128)
..+++..++. .+.+|+.+.+ +++|+++++...++++++|+++ |+||+|+++|+||||||+++|+++||.|+|+|
T Consensus 41 ~~~~~~~~~~----~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~~~~gI~V~n~~ 115 (347)
T 1mx3_A 41 DVATVAFCDA----QSTQEIHEKVLNEAVGALMYHTITLTREDLEKF-KALRIIVRIGSGFDNIDIKSAGDLGIAVCNVP 115 (347)
T ss_dssp TTCEEEECCC----SSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTC-SSCCEEEESSSCCTTBCHHHHHHTTCEEECCC
T ss_pred ccceEEecCC----CCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhC-CCCCEEEEcccccCcccHHHHHhCCceEEECC
Confidence 4467776653 3456676664 7889988877778999999986 89999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeee
Q psy13054 134 PVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLL 213 (1128)
Q Consensus 134 g~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~gi 213 (1128)
++++++||||++++||++.|++..+++.++++ .|+ ....... .+. ..+..+.++++||
T Consensus 116 ~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g-~w~------------~~~~~~~-----~~~----~~~~~l~g~tvGI 173 (347)
T 1mx3_A 116 AASVEETADSTLCHILNLYRRATWLHQALREG-TRV------------QSVEQIR-----EVA----SGAARIRGETLGI 173 (347)
T ss_dssp STTHHHHHHHHHHHHHHHHHCHHHHHHHHHTT-CCC------------CSHHHHH-----HHT----TTCCCCTTCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcC-Ccc------------ccccccc-----ccc----cCccCCCCCEEEE
Confidence 99999999999999999999999988877653 231 0000000 000 0012345788999
Q ss_pred eeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCcccccee
Q psy13054 214 ISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHY 293 (1128)
Q Consensus 214 iGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~ 293 (1128)
||+|. +|+.++++++++++. +
T Consensus 174 IG~G~---------------------------------IG~~vA~~l~~~G~~--------------------------V 194 (347)
T 1mx3_A 174 IGLGR---------------------------------VGQAVALRAKAFGFN--------------------------V 194 (347)
T ss_dssp ECCSH---------------------------------HHHHHHHHHHTTTCE--------------------------E
T ss_pred EeECH---------------------------------HHHHHHHHHHHCCCE--------------------------E
Confidence 99873 678888888777553 2
Q ss_pred ecccccccc-cccccCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHH
Q psy13054 294 FGYNWFERS-NGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLK 371 (1128)
Q Consensus 294 ~g~~~~~~~-~~~~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~ 371 (1128)
++|++.... .+...|++++ +++|++++||+|++|||+|++|+++||++.|++||+|++|||+|||++||++||++||+
T Consensus 195 ~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 274 (347)
T 1mx3_A 195 LFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALK 274 (347)
T ss_dssp EEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred EEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHH
Confidence 333432221 1234566665 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeEEEEecCCCCCCC-CCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHH
Q psy13054 372 DKKIGGAGLDVMIPEPLP-ADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 372 sG~IagAaLDVfe~EPl~-~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~ 432 (1128)
+|+|+||+||||+.||++ .++||+.+||+ ++|||+++++.+ ...++|+.+|+++.
T Consensus 275 ~g~i~gA~lDV~~~EP~~~~~~~L~~~~nv------i~tPHia~~t~~~~~~~~~~~~~ni~~~~~g~ 336 (347)
T 1mx3_A 275 EGRIRGAALDVHESEPFSFSQGPLKDAPNL------ICTPHAAWYSEQASIEMREEAAREIRRAITGR 336 (347)
T ss_dssp HTSEEEEEESCCSSSSCCTTSSTTTTCSSE------EECSSCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hCCCcEEEEeecccCCCCCCCchHHhCCCE------EEEchHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999987 47999999999 999999999885 34567888877653
No 63
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=9.8e-45 Score=413.72 Aligned_cols=288 Identities=24% Similarity=0.386 Sum_probs=235.1
Q ss_pred cchhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHH
Q psy13054 43 LVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEI 122 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa 122 (1128)
+.++.++.++ ..+++..++ ..+.+++.+.++++|+++++..+++++++|+++ |+||+|+++|+|+||||+++|
T Consensus 11 ~~~~~~~~l~--~~~~~~~~~----~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~ 83 (333)
T 2d0i_A 11 MKREALEELK--KYADVEIIL----YPSGEELKGVIGRFDGIIVSPTTKITREVLENA-ERLKVISCHSAGYDNIDLEEA 83 (333)
T ss_dssp CCHHHHHHHH--TTSEEEECC----SCCHHHHHHHGGGCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCHHHH
T ss_pred CCHHHHHHHH--hcCCEEEeC----CCCHHHHHHHhcCCEEEEECCCCCCCHHHHhhC-CCceEEEECCcccccccHHHH
Confidence 4555566665 446777654 146788999999999999877778999999986 899999999999999999999
Q ss_pred HhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCcccccc
Q psy13054 123 KSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEIC 202 (1128)
Q Consensus 123 ~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 202 (1128)
+++||.|+|+||+++++||||++++||+++|++..+++.++++ .| ..... ...
T Consensus 84 ~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g-~w------------~~~~~--------------~~~ 136 (333)
T 2d0i_A 84 TKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRG-EW------------ESHAK--------------IWT 136 (333)
T ss_dssp HHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTT-CC------------CCHHH--------------HHT
T ss_pred HhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcC-CC------------CcCcc--------------ccc
Confidence 9999999999999999999999999999999999988877653 23 11000 000
Q ss_pred c----cccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCC
Q psy13054 203 Q----KYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQ 278 (1128)
Q Consensus 203 ~----~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~ 278 (1128)
+ ..+.++++||||+|. +|+.+++.+.++++.
T Consensus 137 ~~~~~~~l~g~~vgIIG~G~---------------------------------iG~~vA~~l~~~G~~------------ 171 (333)
T 2d0i_A 137 GFKRIESLYGKKVGILGMGA---------------------------------IGKAIARRLIPFGVK------------ 171 (333)
T ss_dssp TSCCCCCSTTCEEEEECCSH---------------------------------HHHHHHHHHGGGTCE------------
T ss_pred CCcccCCCCcCEEEEEccCH---------------------------------HHHHHHHHHHHCCCE------------
Confidence 1 235578899999873 577788877766442
Q ss_pred ccccccCCccccceeecccccccc-cccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecC
Q psy13054 279 NPKWRMGSKTDTNHYFGYNWFERS-NGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSR 357 (1128)
Q Consensus 279 va~~~~g~~~~~~~~~g~~~~~~~-~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaR 357 (1128)
++++++.... ...+.|++++++++++++||+|++|+|++++|+++|+++.|+.||+| +|||+||
T Consensus 172 --------------V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~sr 236 (333)
T 2d0i_A 172 --------------LYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGR 236 (333)
T ss_dssp --------------EEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSC
T ss_pred --------------EEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCC
Confidence 2334433221 12234666779999999999999999999999999999999999999 9999999
Q ss_pred CCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCC-CCCCCCcccccccCCCCChh------hhHHHHHHHHHH
Q psy13054 358 GGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLD-NCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFE 430 (1128)
Q Consensus 358 G~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lp-Nvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~ 430 (1128)
|.++|+++|+++|++|+|+|||+|||++||++ ++||+.+| || ++|||+++.|.+ ...++|+.+|++
T Consensus 237 g~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nv------iltPh~~~~t~~~~~~~~~~~~~n~~~~~~ 309 (333)
T 2d0i_A 237 GALVDEKAVTEAIKQGKLKGYATDVFEKEPVR-EHELFKYEWET------VLTPHYAGLALEAQEDVGFRAVENLLKVLR 309 (333)
T ss_dssp GGGBCHHHHHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTE------EECCSCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHcCCceEEEecCCCCCCCC-CchHHcCCCCE------EEcCccCCCcHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999988 99999999 99 999999999885 345677777665
Q ss_pred H
Q psy13054 431 E 431 (1128)
Q Consensus 431 ~ 431 (1128)
+
T Consensus 310 g 310 (333)
T 2d0i_A 310 G 310 (333)
T ss_dssp T
T ss_pred C
Confidence 4
No 64
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=3.1e-44 Score=409.35 Aligned_cols=298 Identities=35% Similarity=0.528 Sum_probs=239.4
Q ss_pred cchhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHH
Q psy13054 43 LVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEI 122 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa 122 (1128)
+.++.++.++....+++..++. ....+.+++.+.++++|+++++...++++++|++++|+||+|+++|+||||||+++|
T Consensus 17 ~~~~~~~~l~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~d~id~~~~ 95 (330)
T 2gcg_A 17 IPAEGRVALARAADCEVEQWDS-DEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEI 95 (330)
T ss_dssp CCHHHHHHHHHCTTEEEEECCS-SSCCCHHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEESSSCCTTBCHHHH
T ss_pred CCHHHHHHHHhcCCceEEEecC-CCCCCHHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEECCcccccccHHHH
Confidence 3445555554211367776652 223567899999999999998766789999999865799999999999999999999
Q ss_pred HhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCcccccc
Q psy13054 123 KSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEIC 202 (1128)
Q Consensus 123 ~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 202 (1128)
+++||.|+|+||+++++||||++++||++.|++..+++.++++ .|. .|... ...
T Consensus 96 ~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~-~w~---------~~~~~----------------~~~ 149 (330)
T 2gcg_A 96 KKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNG-GWT---------SWKPL----------------WLC 149 (330)
T ss_dssp HHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-CCC---------SCCTT----------------SSC
T ss_pred HhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcC-CCc---------ccCcc----------------ccc
Confidence 9999999999999999999999999999999999988877653 221 11100 011
Q ss_pred ccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCcccc
Q psy13054 203 QKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKW 282 (1128)
Q Consensus 203 ~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~ 282 (1128)
+..+.++++||||+|. +|+.+++.+.++++.
T Consensus 150 ~~~l~g~~vgIIG~G~---------------------------------iG~~iA~~l~~~G~~---------------- 180 (330)
T 2gcg_A 150 GYGLTQSTVGIIGLGR---------------------------------IGQAIARRLKPFGVQ---------------- 180 (330)
T ss_dssp BCCCTTCEEEEECCSH---------------------------------HHHHHHHHHGGGTCC----------------
T ss_pred CcCCCCCEEEEECcCH---------------------------------HHHHHHHHHHHCCCE----------------
Confidence 2335578899999873 577777777665432
Q ss_pred ccCCccccceeeccccccc--ccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCc
Q psy13054 283 RMGSKTDTNHYFGYNWFER--SNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL 360 (1128)
Q Consensus 283 ~~g~~~~~~~~~g~~~~~~--~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~l 360 (1128)
++++++... +...+.+++++++++++++||+|++|+|++++|+++|+++.++.||+|++|||+|||++
T Consensus 181 ----------V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~ 250 (330)
T 2gcg_A 181 ----------RFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDV 250 (330)
T ss_dssp ----------EEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGG
T ss_pred ----------EEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcc
Confidence 233443221 11234566777999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHH
Q psy13054 361 LDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 361 VDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~ 432 (1128)
+|+++|.++|++|+|+||+||||++||++.++||+++||| ++|||+++.+.+ ...++|+.+|+++.
T Consensus 251 v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nv------i~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~ 322 (330)
T 2gcg_A 251 VNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNC------VILPHIGSATHRTRNTMSLLAANNLLAGLRGE 322 (330)
T ss_dssp BCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTE------EECCSCTTCBHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCE------EECCCCCCCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999 999999999864 35578888887764
No 65
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=1.2e-44 Score=413.48 Aligned_cols=298 Identities=29% Similarity=0.452 Sum_probs=238.3
Q ss_pred cchhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHH
Q psy13054 43 LVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEI 122 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa 122 (1128)
+.++.++.++ ..+++..++. ....+.+++.+.++++|+++++..+++++++|+++ |+||+|+++|+||||||+++|
T Consensus 11 ~~~~~~~~l~--~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~ 86 (334)
T 2dbq_A 11 IPEVGIKMLE--DEFEVEVWGD-EKEIPREILLKKVKEVDALVTMLSERIDKEVFENA-PKLRIVANYAVGYDNIDIEEA 86 (334)
T ss_dssp CCHHHHHHHH--TTSEEEECCC-SSCCCHHHHHHHTTSCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHH
T ss_pred CCHHHHHHHH--hcCCEEEecC-CCCCCHHHHHHHhcCcEEEEEcCCCCCCHHHHhhC-CCceEEEECCcccccccHHHH
Confidence 4445556554 4577777653 22346788999999999999977678999999986 899999999999999999999
Q ss_pred HhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCcccccc
Q psy13054 123 KSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEIC 202 (1128)
Q Consensus 123 ~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 202 (1128)
+++||.|+|+||+++++||||++++||++.|++..+++.++++ .|... ...|... ...
T Consensus 87 ~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~-~w~~~-----~~~~~~~----------------~~~ 144 (334)
T 2dbq_A 87 TKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSG-EWKKR-----GVAWHPK----------------WFL 144 (334)
T ss_dssp HHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTS-HHHHT-----TCCCCTT----------------TTC
T ss_pred HhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcC-CCccc-----ccccccc----------------ccc
Confidence 9999999999999999999999999999999999998877764 45210 0011000 011
Q ss_pred ccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCcccc
Q psy13054 203 QKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKW 282 (1128)
Q Consensus 203 ~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~ 282 (1128)
+..+.++++||||+|. +|+.+++.+.++++.
T Consensus 145 ~~~l~g~~vgIIG~G~---------------------------------iG~~iA~~l~~~G~~---------------- 175 (334)
T 2dbq_A 145 GYDVYGKTIGIIGLGR---------------------------------IGQAIAKRAKGFNMR---------------- 175 (334)
T ss_dssp CCCCTTCEEEEECCSH---------------------------------HHHHHHHHHHHTTCE----------------
T ss_pred ccCCCCCEEEEEccCH---------------------------------HHHHHHHHHHhCCCE----------------
Confidence 2235568899998873 577777777665443
Q ss_pred ccCCccccceeecccccccc-cccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCcc
Q psy13054 283 RMGSKTDTNHYFGYNWFERS-NGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLL 361 (1128)
Q Consensus 283 ~~g~~~~~~~~~g~~~~~~~-~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lV 361 (1128)
++++++.... ...+.|+++.++++++++||+|++|+|++++|+++|+++.++.||+|++|||+|||.++
T Consensus 176 ----------V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v 245 (334)
T 2dbq_A 176 ----------ILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVV 245 (334)
T ss_dssp ----------EEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGB
T ss_pred ----------EEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCccc
Confidence 2333332221 12234666779999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHH
Q psy13054 362 DQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 362 De~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~ 432 (1128)
|+++|.++|++|+|+||++|||++|| +.++||+.+||| ++|||+++.|.+ ....+|+.+|+++.
T Consensus 246 ~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~v------i~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~ 315 (334)
T 2dbq_A 246 DTNALVKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNV------VLTPHIGSASFGAREGMAELVAKNLIAFKRGE 315 (334)
T ss_dssp CHHHHHHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTE------EECSSCTTCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCE------EECCccCCCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999 889999999999 999999999875 34567777776653
No 66
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=2e-44 Score=413.59 Aligned_cols=291 Identities=22% Similarity=0.305 Sum_probs=234.0
Q ss_pred hhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcC-----CceEEEeC------CCCCCCHHHHhccCCCceEEEEcCccc
Q psy13054 46 ESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLK-----GCSALLCN------PHQKVDKEVLDRSGENLKVIATFSVGH 114 (1128)
Q Consensus 46 ~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~-----~adaIi~~------~~~~i~~evL~~~~~~LK~I~~~gvG~ 114 (1128)
+.++.|+ ..+++..++. .+.+++++.++ ++|+|++. ...++++++|++++++||+|+++|+||
T Consensus 18 ~~~~~l~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~G~ 91 (348)
T 2w2k_A 18 DLWSDFQ--QKFEVIPANL----TTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSSLKVFAAAGAGF 91 (348)
T ss_dssp HHHHHHH--HHSEEEECCC----CCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSCTTCCEEEESSSCC
T ss_pred HHHHHHH--hcceEEecCC----CCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhcccCceEEEECCccc
Confidence 3445543 3467777652 36889999887 89998864 235899999998743799999999999
Q ss_pred ccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhh--hHHHHhhccCCCCcccccccccceE
Q psy13054 115 DHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSS--FAEIQTRALDTKFPAKQQNLHNVKV 192 (1128)
Q Consensus 115 DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v 192 (1128)
||||+++|+++||.|+|+||+++++||||++++||+++|++..+++.++++.. |.......
T Consensus 92 d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~----------------- 154 (348)
T 2w2k_A 92 DWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEI----------------- 154 (348)
T ss_dssp TTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHH-----------------
T ss_pred cccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccc-----------------
Confidence 99999999999999999999999999999999999999999999887766421 42100000
Q ss_pred eecCccccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhcc-CCceeeeeeC
Q psy13054 193 RLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLK-GSDIFEFFLG 271 (1128)
Q Consensus 193 ~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~-g~~~~~~ilG 271 (1128)
...+..+.|+++||||+|. +|+.+++.+. ++++.
T Consensus 155 -------~~~~~~l~g~~vgIIG~G~---------------------------------IG~~vA~~l~~~~G~~----- 189 (348)
T 2w2k_A 155 -------GKSAHNPRGHVLGAVGLGA---------------------------------IQKEIARKAVHGLGMK----- 189 (348)
T ss_dssp -------HTTCCCSTTCEEEEECCSH---------------------------------HHHHHHHHHHHTTCCE-----
T ss_pred -------cccCcCCCCCEEEEEEECH---------------------------------HHHHHHHHHHHhcCCE-----
Confidence 0011234568899999873 6778888887 76543
Q ss_pred CCCCCCCccccccCCccccceeecccccccc--cccccCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCC
Q psy13054 272 PKKNGSQNPKWRMGSKTDTNHYFGYNWFERS--NGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKP 348 (1128)
Q Consensus 272 ~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~--~~~~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~ 348 (1128)
++++++.... ...+.|++++ ++++++++||+|++|||++++|+++|+++.|++||+
T Consensus 190 ---------------------V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~ 248 (348)
T 2w2k_A 190 ---------------------LVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKP 248 (348)
T ss_dssp ---------------------EEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCT
T ss_pred ---------------------EEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCC
Confidence 2333332211 1233467777 899999999999999999999999999999999999
Q ss_pred CcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChh------hhHH
Q psy13054 349 TAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHP------LVQL 422 (1128)
Q Consensus 349 gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~ 422 (1128)
|++|||+|||+++|+++|.++|++|+|+||++|||++|| +.++||+.+||| ++|||++++|.+ ....
T Consensus 249 gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nv------iltPH~~~~t~e~~~~~~~~~~ 321 (348)
T 2w2k_A 249 GSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHV------TLTTHIGGVAIETFHEFERLTM 321 (348)
T ss_dssp TEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSE------EECCSCTTCSHHHHHHHHHHHH
T ss_pred CCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCE------EEcCcCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 678899999999 999999999985 3457
Q ss_pred HHHHHHHHHH
Q psy13054 423 DNCEEFFEEL 432 (1128)
Q Consensus 423 ~n~~~~~~~~ 432 (1128)
+|+.+|+++.
T Consensus 322 ~ni~~~~~g~ 331 (348)
T 2w2k_A 322 TNIDRFLLQG 331 (348)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 8888888764
No 67
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=3.7e-43 Score=423.71 Aligned_cols=288 Identities=25% Similarity=0.382 Sum_probs=238.3
Q ss_pred cchhhhhhhhccCCceEEEcCCCCCCCCHHHHHHhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHH
Q psy13054 43 LVPESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEI 122 (1128)
Q Consensus 43 l~~~~l~~l~~~~~~~v~~~~~~~~~~~~eel~~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa 122 (1128)
+.++.++.++ +.+++..++. .+.+++.+.++++|++++++.+++++++|+++ |+||+|+++|+|+||||+++|
T Consensus 13 ~~~~~~~~l~--~~~~v~~~~~----~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~id~~~~ 85 (529)
T 1ygy_A 13 LAPSTVAALG--DQVEVRWVDG----PDRDKLLAAVPEADALLVRSATTVDAEVLAAA-PKLKIVARAGVGLDNVDVDAA 85 (529)
T ss_dssp CCGGGGTTSC--SSSEEEECCT----TSHHHHHHHGGGCSEEEECSSSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHH
T ss_pred CCHHHHHHHh--cCceEEEcCC----CCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCcEEEECCcCcCccCHhHH
Confidence 3344455553 3478877652 46789999999999999987789999999986 899999999999999999999
Q ss_pred HhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCcccccc
Q psy13054 123 KSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEIC 202 (1128)
Q Consensus 123 ~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 202 (1128)
+++||.|+|+|++|+.+||||++++||+++|+++.+++.++++ .|... .+.
T Consensus 86 ~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g-------------~w~~~----------------~~~ 136 (529)
T 1ygy_A 86 TARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREH-------------TWKRS----------------SFS 136 (529)
T ss_dssp HHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTT-------------CCCGG----------------GCC
T ss_pred HhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhC-------------CCccc----------------CcC
Confidence 9999999999999999999999999999999999998877653 34211 011
Q ss_pred ccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCcccc
Q psy13054 203 QKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKW 282 (1128)
Q Consensus 203 ~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~ 282 (1128)
+..+.++++||||+|. +|+.++++++++++.
T Consensus 137 ~~~l~g~~vgIIG~G~---------------------------------IG~~vA~~l~~~G~~---------------- 167 (529)
T 1ygy_A 137 GTEIFGKTVGVVGLGR---------------------------------IGQLVAQRIAAFGAY---------------- 167 (529)
T ss_dssp BCCCTTCEEEEECCSH---------------------------------HHHHHHHHHHTTTCE----------------
T ss_pred ccccCCCEEEEEeeCH---------------------------------HHHHHHHHHHhCCCE----------------
Confidence 2345678999999973 677888888776542
Q ss_pred ccCCccccceeeccccccc-ccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCcc
Q psy13054 283 RMGSKTDTNHYFGYNWFER-SNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLL 361 (1128)
Q Consensus 283 ~~g~~~~~~~~~g~~~~~~-~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lV 361 (1128)
+++|+++.. +...+.|++.++++|++++||+|++|+|++++|+++|+++.|++||+|+++||+|||+++
T Consensus 168 ----------V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv 237 (529)
T 1ygy_A 168 ----------VVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLV 237 (529)
T ss_dssp ----------EEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSB
T ss_pred ----------EEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchh
Confidence 344444321 123456777789999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCCCCCCcccccccCCCCChhhh------HHHHHHHHHHHH
Q psy13054 362 DQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLDVMIPEPLPADHPLV------QLDNCEEFFEEL 432 (1128)
Q Consensus 362 De~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNvg~~~~~v~tph~~~~t~~~~------~~~n~~~~~~~~ 432 (1128)
|+++|.++|++|+|+||++|||+.||+ .++|||++||+ ++|||.++++.+.. .++|+..|+.+.
T Consensus 238 ~~~aL~~al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~v------ilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 238 DEAALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQV------VVTPHLGASTAEAQDRAGTDVAESVRLALAGE 307 (529)
T ss_dssp CHHHHHHHHHTSSEEEEEESSCSSSSC-SCCGGGGCTTE------EECSSCSSCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHcCCccEEEEeeccCCCC-CCchHHhCCCE------EEccccCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999995 68999999999 99999998877543 366777766654
No 68
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=1.7e-43 Score=398.26 Aligned_cols=254 Identities=20% Similarity=0.246 Sum_probs=209.2
Q ss_pred HhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhch
Q psy13054 76 EKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRF 155 (1128)
Q Consensus 76 ~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i 155 (1128)
+.++++|+++++. .+.++|+++ |+||+|+++|+|+||||++++ ++||.|+|+||+++.+||||++++||++.|++
T Consensus 27 ~~~~~~d~~i~~~---~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~ 101 (303)
T 1qp8_A 27 GDLGNVEAALVSR---ITAEELAKM-PRLKFIQVVTAGLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRI 101 (303)
T ss_dssp SCCTTBCCCCBSC---CCHHHHHHC-TTCCCEEBSSSCCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTH
T ss_pred hhhCCCEEEEECC---CCHHHHhhC-CCCcEEEECCcCcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCH
Confidence 4578999998764 467999986 899999999999999999985 79999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCcc
Q psy13054 156 QQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKT 235 (1128)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t 235 (1128)
..+++.++++ .|.... .+..+.++++||||+|.
T Consensus 102 ~~~~~~~~~g-------------~w~~~~-----------------~~~~l~g~~vgIIG~G~----------------- 134 (303)
T 1qp8_A 102 IQYGEKMKRG-------------DYGRDV-----------------EIPLIQGEKVAVLGLGE----------------- 134 (303)
T ss_dssp HHHHHHHHTT-------------CCCCCS-----------------CCCCCTTCEEEEESCST-----------------
T ss_pred HHHHHHHHcC-------------CCCCCC-----------------CCCCCCCCEEEEEccCH-----------------
Confidence 9988876653 342100 01124568899999873
Q ss_pred ccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccceeecccccccccccccCCcccCHH
Q psy13054 236 DTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLVPLD 315 (1128)
Q Consensus 236 ~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~vsLd 315 (1128)
+|+.++++++++++. +++|++... .. ....+.+++
T Consensus 135 ----------------IG~~~A~~l~~~G~~--------------------------V~~~dr~~~-~~--~~~~~~~l~ 169 (303)
T 1qp8_A 135 ----------------IGTRVGKILAALGAQ--------------------------VRGFSRTPK-EG--PWRFTNSLE 169 (303)
T ss_dssp ----------------HHHHHHHHHHHTTCE--------------------------EEEECSSCC-CS--SSCCBSCSH
T ss_pred ----------------HHHHHHHHHHHCCCE--------------------------EEEECCCcc-cc--CcccCCCHH
Confidence 678888888776543 233443222 11 122345899
Q ss_pred HHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecC-CCCCCCCCCCc
Q psy13054 316 TLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVM-IPEPLPADHPL 394 (1128)
Q Consensus 316 eLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVf-e~EPl~~~~pL 394 (1128)
+++++||+|++|+|+|++|+|+||++.|++||+|++|||+|||++||++||++||++|+|+||||||| ++||++.++||
T Consensus 170 ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L 249 (303)
T 1qp8_A 170 EALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEF 249 (303)
T ss_dssp HHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHH
T ss_pred HHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 88999999999
Q ss_pred ccCCCCCCCCcccccccCCCC--Chh------hhHHHHHHHHHHHH
Q psy13054 395 VQLDNCGGAGLDVMIPEPLPA--DHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 395 ~~lpNvg~~~~~v~tph~~~~--t~~------~~~~~n~~~~~~~~ 432 (1128)
|++||+ ++|||++++ |.+ ....+|+.+|+++.
T Consensus 250 ~~~~nv------iltPH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~ 289 (303)
T 1qp8_A 250 FSLPNV------VATPWVAGGYGNERVWRQMVMEAVRNLITYATGG 289 (303)
T ss_dssp HTSTTE------EECCSCSSSSSCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hcCCCE------EECCCcCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999 999999998 543 34457777766653
No 69
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.3e-43 Score=403.48 Aligned_cols=249 Identities=21% Similarity=0.296 Sum_probs=210.9
Q ss_pred HhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhch
Q psy13054 76 EKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRF 155 (1128)
Q Consensus 76 ~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i 155 (1128)
+.++++|++++++.+++++++|+ + |+||+|+++|+|+||||+++|+++||.|+|+||+++.+||||++++||++.|+.
T Consensus 33 ~~l~~ad~li~~~~~~~~~~~l~-~-~~Lk~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~ 110 (380)
T 2o4c_A 33 AALAEVDVLLVRSVTEVSRAALA-G-SPVRFVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR 110 (380)
T ss_dssp TTTTTCSEEEECTTSCBCHHHHT-T-SCCCEEEECSSCSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCcEEEEEcCCCCCCHHHhc-C-CCceEEEEcCcccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh
Confidence 34689999999877789999999 5 899999999999999999999999999999999999999999999999999863
Q ss_pred HHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCcc
Q psy13054 156 QQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKT 235 (1128)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t 235 (1128)
. ..+.++++||||+|+
T Consensus 111 ~-----------------------------------------------~~l~g~tvGIIGlG~----------------- 126 (380)
T 2o4c_A 111 G-----------------------------------------------ADLAERTYGVVGAGQ----------------- 126 (380)
T ss_dssp T-----------------------------------------------CCGGGCEEEEECCSH-----------------
T ss_pred h-----------------------------------------------cccCCCEEEEEeCCH-----------------
Confidence 1 012357899999873
Q ss_pred ccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccceeecccccccccccccCCcccCHH
Q psy13054 236 DTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLVPLD 315 (1128)
Q Consensus 236 ~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~vsLd 315 (1128)
||+.++++++++++. ++++++..... ..+..+.+++
T Consensus 127 ----------------IG~~vA~~l~~~G~~--------------------------V~~~d~~~~~~--~~g~~~~~l~ 162 (380)
T 2o4c_A 127 ----------------VGGRLVEVLRGLGWK--------------------------VLVCDPPRQAR--EPDGEFVSLE 162 (380)
T ss_dssp ----------------HHHHHHHHHHHTTCE--------------------------EEEECHHHHHH--STTSCCCCHH
T ss_pred ----------------HHHHHHHHHHHCCCE--------------------------EEEEcCChhhh--ccCcccCCHH
Confidence 678888888776543 33444322111 2345678999
Q ss_pred HHhhcCCEEEEecCCCcc----cccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCC
Q psy13054 316 TLCAESDFIFVTCALTKD----TEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPAD 391 (1128)
Q Consensus 316 eLl~~SDiVslh~PLT~~----T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~ 391 (1128)
|++++||+|++|+|+|++ |+|+||++.|++||+|++|||+|||++||++||++||++|+|+||+||||++||++ +
T Consensus 163 ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~-~ 241 (380)
T 2o4c_A 163 RLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQA-D 241 (380)
T ss_dssp HHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSC-C
T ss_pred HHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCC-c
Confidence 999999999999999999 99999999999999999999999999999999999999999999999999999954 5
Q ss_pred CCcccCCCCCCCCcccccccCCCCChh------hhHHHHHHHHHHHHHHhhhccCCC
Q psy13054 392 HPLVQLDNCGGAGLDVMIPEPLPADHP------LVQLDNCEEFFEELFDKNFQSIDP 442 (1128)
Q Consensus 392 ~pL~~lpNvg~~~~~v~tph~~~~t~~------~~~~~n~~~~~~~~~~~~~~~~~~ 442 (1128)
++|+. +|+ ++|||++++|.+ .+..+|+.+|+.+....++..+.|
T Consensus 242 ~~l~~-~nv------i~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~~~~~~~~~~p 291 (380)
T 2o4c_A 242 PELAA-RCL------IATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERVSLQDVLP 291 (380)
T ss_dssp HHHHT-TCS------EECSSCTTCCHHHHHHHHHHHHHHHHHHHTCCCCCCGGGTCC
T ss_pred hhhcc-CCE------EEccccCcCCHHHHHHHHHHHHHHHHHHHcCCCccchhhcCC
Confidence 67777 498 999999999985 456789999888776666665444
No 70
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=5.6e-43 Score=390.88 Aligned_cols=246 Identities=18% Similarity=0.250 Sum_probs=199.8
Q ss_pred HhcCCceEEEeCCCCCCCHHHHhccCCCceEEEEcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhch
Q psy13054 76 EKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRF 155 (1128)
Q Consensus 76 ~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i 155 (1128)
+.++++|++++. ..++ + .|+||+|+++|+||||||+++|++++|.++| ++.++++||||++++||++.|++
T Consensus 30 ~~~~~ad~li~~-~~~~------~-~~~Lk~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~ 100 (290)
T 3gvx_A 30 PDYYDAEAQVIK-DRYV------L-GKRTKMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNI 100 (290)
T ss_dssp TSCCCCSEEEES-SCCC------C-CSSCCEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTH
T ss_pred cchhhhhhhhhh-hhhh------h-hhhhHHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhh
Confidence 567899999984 3333 4 4899999999999999999999987665555 58889999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHhhccCCCCcccccccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCcc
Q psy13054 156 QQRHNWIARLSSFAEIQTRALDTKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKT 235 (1128)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t 235 (1128)
..+++.++++ .|.... ...+.||++||||+|.
T Consensus 101 ~~~~~~~~~g-------------~w~~~~------------------~~~l~g~tvGIIGlG~----------------- 132 (290)
T 3gvx_A 101 LENNELMKAG-------------IFRQSP------------------TTLLYGKALGILGYGG----------------- 132 (290)
T ss_dssp HHHHHHHHTT-------------CCCCCC------------------CCCCTTCEEEEECCSH-----------------
T ss_pred hhhhhHhhhc-------------ccccCC------------------ceeeecchheeeccCc-----------------
Confidence 9988876552 332110 0224578999999973
Q ss_pred ccccccccccccccchhhHhHhhhccCCceeeeeeCCCCCCCCccccccCCccccceeecccccccccccccCCccc-CH
Q psy13054 236 DTNHYFKAFENSTGAFLSSEINNSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLV-PL 314 (1128)
Q Consensus 236 ~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~~~~~~g~~~v-sL 314 (1128)
||+.++++++++++. +++|++...... .++++ ++
T Consensus 133 ----------------IG~~vA~~l~~~G~~--------------------------V~~~dr~~~~~~---~~~~~~~l 167 (290)
T 3gvx_A 133 ----------------IGRRVAHLAKAFGMR--------------------------VIAYTRSSVDQN---VDVISESP 167 (290)
T ss_dssp ----------------HHHHHHHHHHHHTCE--------------------------EEEECSSCCCTT---CSEECSSH
T ss_pred ----------------hhHHHHHHHHhhCcE--------------------------EEEEeccccccc---cccccCCh
Confidence 678888888776543 344443332211 13455 99
Q ss_pred HHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCc
Q psy13054 315 DTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPL 394 (1128)
Q Consensus 315 deLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL 394 (1128)
+|++++||+|++|||+|++|+++|+++.|++||||++|||+|||++||++||++||++|+|+||+||||++||+ +||
T Consensus 168 ~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~---~pL 244 (290)
T 3gvx_A 168 ADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE---ITE 244 (290)
T ss_dssp HHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS---CCS
T ss_pred HHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc---cch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996 999
Q ss_pred ccCCCCCCCCcccccccCC-CCChh------hhHHHHHHHHHHHH
Q psy13054 395 VQLDNCGGAGLDVMIPEPL-PADHP------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 395 ~~lpNvg~~~~~v~tph~~-~~t~~------~~~~~n~~~~~~~~ 432 (1128)
|++||| ++|||++ +++.+ .+..+|+.+|+++.
T Consensus 245 ~~~~nv------ilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~ 283 (290)
T 3gvx_A 245 TNLRNA------ILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGE 283 (290)
T ss_dssp CCCSSE------EECCSCSSCBTTBCCHHHHHHHHHHHHHHTC--
T ss_pred hhhhhh------hcCccccCCccchHHHHHHHHHHHHHHhhhcCC
Confidence 999999 9999999 66653 45678888877654
No 71
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.97 E-value=2.2e-33 Score=330.94 Aligned_cols=228 Identities=13% Similarity=0.158 Sum_probs=203.3
Q ss_pred CCccEEE-EccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCccc
Q psy13054 874 ENLKVIT-TFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIM 952 (1128)
Q Consensus 874 ~~LK~I~-~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~ 952 (1128)
++++.|+ .+++|+|++ ++|.++||.|+|++++|+ +||| +++|++....+.+++| |.+ ....
T Consensus 192 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r-------~~~~ 253 (479)
T 1v8b_A 192 KKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR-------ATDF 253 (479)
T ss_dssp TTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH-------HHCC
T ss_pred cCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh-------cccc
Confidence 6899998 889999998 899999999999999999 9999 4568888888888888 862 1223
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCch-hhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKE-EGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~-~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
++.||+|||||+|.||+.+|++|++|||+|++||++..+. .+...|+...++++++++||+|++|+ +|+++|+++
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~----~t~~lI~~~ 329 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT----GNVDVIKLE 329 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC----SSSSSBCHH
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC----ChhhhcCHH
Confidence 7999999999999999999999999999999999876654 34556777789999999999999995 789999999
Q ss_pred HHccCCCCcEEEEcCCCcc-cCHHHHHH--HHhcCCceEEEEeccCCCCCCCCCccccC--CCeEECCCCC-CCcHH-HH
Q psy13054 1032 QFSLMKPTAILVNTSRGGL-LDQEALVE--FLKDKKIGGAGLDVMIPEPLPADHPLVQL--DNCVLTPHTS-SATKA-VR 1104 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~l-Vde~aL~~--aL~~g~i~gaaLDV~e~EPl~~~~pL~~~--pNvilTPHia-g~t~e-~~ 1104 (1128)
.|++||+|++|||+|||++ ||+++|.+ +|++|+|+ +++||| |+|.++|||.+ |||++| |+| |.+.+ ..
T Consensus 330 ~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~~~~l~~l~~~nvv~t-H~atghp~e~~~ 404 (479)
T 1v8b_A 330 HLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPNGNKIIVLARGRLLNL-GCATGHPAFVMS 404 (479)
T ss_dssp HHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH-HSSCCSCHHHHH
T ss_pred HHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCCCCeeeEecCCCEEEE-eccCCCCchhHH
Confidence 9999999999999999999 99999999 99999998 889998 55668999999 999999 999 67766 67
Q ss_pred HHHHHHHHHHHHHHHcCC--CCCCCC
Q psy13054 1105 DEKSSTSAENIIRGYKGE--PMIYEL 1128 (1128)
Q Consensus 1105 ~~~~~~~~~nl~~~l~G~--~l~~~v 1128 (1128)
.+++..+++|+..|++|+ ++.|.|
T Consensus 405 ~s~a~~~~~ni~~~~~g~~~~l~n~V 430 (479)
T 1v8b_A 405 FSFCNQTFAQLDLWQNKDTNKYENKV 430 (479)
T ss_dssp HHHHHHHHHHHHHHHTTTSSSCCSSE
T ss_pred HHHHHHHHHHHHHHHcCCCCcCCcce
Confidence 889999999999999999 888754
No 72
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.97 E-value=1.2e-33 Score=334.35 Aligned_cols=227 Identities=13% Similarity=0.165 Sum_probs=197.0
Q ss_pred CCccEEE-EccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCccc
Q psy13054 874 ENLKVIT-TFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIM 952 (1128)
Q Consensus 874 ~~LK~I~-~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~ 952 (1128)
+++|.|+ ..++|+|++ ++|.++||.|+|++++|+ +|||+. +|++....+.+..| |.+ ....
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~l~~g-w~~-------~~g~ 273 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRESLVDG-IKR-------ATDV 273 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTTHHHH-HHH-------HHCC
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhhhhhh-hhh-------cccc
Confidence 6889998 889999988 889999999999999999 999953 46666666666666 751 1223
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCch-hhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKE-EGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~-~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
++.||+|||||+|.||+.+|++|++|||+|++||++..+. .....|++..++++++++||+|++|+ +|+++|+++
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~----~t~~lI~~~ 349 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT----GNYHVINHD 349 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS----SSSCSBCHH
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC----CcccccCHH
Confidence 7999999999999999999999999999999999776553 24456777789999999999999997 789999999
Q ss_pred HHccCCCCcEEEEcCCCcc-cCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccC--CCeEECCCCC-CCcHH-HHHH
Q psy13054 1032 QFSLMKPTAILVNTSRGGL-LDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQL--DNCVLTPHTS-SATKA-VRDE 1106 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~l-Vde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~--pNvilTPHia-g~t~e-~~~~ 1106 (1128)
.|++||+|++|||+|||++ ||+++| ++|++|+|+ |+++.||+|.++|||.+ |||++| |+| |.+.+ ...+
T Consensus 350 ~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~----~~~Dv~plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~ 423 (494)
T 3d64_A 350 HMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK----PQVDHIIFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNS 423 (494)
T ss_dssp HHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE----TTEEEEECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHH
T ss_pred HHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc----eeEEEEECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHH
Confidence 9999999999999999999 699999 999999997 45555588889999999 999999 999 66755 7788
Q ss_pred HHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1107 KSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1107 ~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
++..+++|+.+|++|+++.|.|
T Consensus 424 ~a~~~~~ni~~~~~g~~~~n~V 445 (494)
T 3d64_A 424 FTNQTLAQIELFTRGGEYANKV 445 (494)
T ss_dssp HHHHHHHHHHHHHHGGGSCSSE
T ss_pred HHHHHHHHHHHHHcCCCCCCce
Confidence 9999999999999999988865
No 73
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=99.90 E-value=1.5e-25 Score=265.27 Aligned_cols=214 Identities=13% Similarity=0.100 Sum_probs=162.7
Q ss_pred CCceEEE-EcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCC
Q psy13054 102 ENLKVIA-TFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKF 180 (1128)
Q Consensus 102 ~~LK~I~-~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1128)
+++|.|+ ..++|+|++ ++|+++||.|+|+|++|+ +|||+ ++|++......++.+ |..
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~-------l~r~~~~~~~~l~~g--w~~---------- 269 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKS-------KFDNLYGCRESLVDG--IKR---------- 269 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------HHHHHHHHHTTHHHH--HHH----------
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHH-------HHhhhHhhhhhhhhh--hhh----------
Confidence 5799998 889999998 889999999999999999 99994 347766543323221 211
Q ss_pred cccccccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhc
Q psy13054 181 PAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSL 260 (1128)
Q Consensus 181 ~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l 260 (1128)
..+..+.||++||+|+|. +|+.+++++
T Consensus 270 --------------------~~g~~L~GktVgIIG~G~---------------------------------IG~~vA~~l 296 (494)
T 3d64_A 270 --------------------ATDVMIAGKIAVVAGYGD---------------------------------VGKGCAQSL 296 (494)
T ss_dssp --------------------HHCCCCTTCEEEEECCSH---------------------------------HHHHHHHHH
T ss_pred --------------------ccccccCCCEEEEEccCH---------------------------------HHHHHHHHH
Confidence 011224568899999873 678888888
Q ss_pred cCCceeeeeeCCCCCCCCccccccCCccccceeecccccccc--cccccCCcccCHHHHhhcCCEEEEecCCCccccccc
Q psy13054 261 KGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERS--NGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLI 338 (1128)
Q Consensus 261 ~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~--~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lI 338 (1128)
+++++. ++++++.... .....|+++++++|++++||+|++|+ +|+++|
T Consensus 297 ~~~G~~--------------------------V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~----~t~~lI 346 (494)
T 3d64_A 297 RGLGAT--------------------------VWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT----GNYHVI 346 (494)
T ss_dssp HTTTCE--------------------------EEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS----SSSCSB
T ss_pred HHCCCE--------------------------EEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC----Cccccc
Confidence 877543 3334432221 12234677789999999999999997 899999
Q ss_pred CHHHHhcCCCCcEEEEecCCCc-cCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccC--CCCCCCCcccccccCCCC
Q psy13054 339 GRKQFSLMKPTAILINTSRGGL-LDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQL--DNCGGAGLDVMIPEPLPA 415 (1128)
Q Consensus 339 n~~~l~~MK~gaiLINtaRG~l-VDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~l--pNvg~~~~~v~tph~~~~ 415 (1128)
|++.|++||+|++|||+|||++ ||++|| +||++|+|+ +++|| ||+|.++|||.+ ||+ ++| |++..
T Consensus 347 ~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nv------v~t-H~atg 414 (494)
T 3d64_A 347 NHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRL------VNL-GCATG 414 (494)
T ss_dssp CHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSB------HHH-HTSCC
T ss_pred CHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCE------EEE-eCcCC
Confidence 9999999999999999999999 699999 999999997 55555 577889999999 999 889 99843
Q ss_pred -Chh-------hhHHHHHHHHHHHH
Q psy13054 416 -DHP-------LVQLDNCEEFFEEL 432 (1128)
Q Consensus 416 -t~~-------~~~~~n~~~~~~~~ 432 (1128)
+.+ ..+++|+..|+++.
T Consensus 415 ~~~~~~~~~~a~~~~~ni~~~~~g~ 439 (494)
T 3d64_A 415 HPSFVMSNSFTNQTLAQIELFTRGG 439 (494)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 421 34567777766543
No 74
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=99.90 E-value=2.7e-25 Score=262.21 Aligned_cols=198 Identities=13% Similarity=0.133 Sum_probs=158.2
Q ss_pred CCceEEE-EcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCC
Q psy13054 102 ENLKVIA-TFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKF 180 (1128)
Q Consensus 102 ~~LK~I~-~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (1128)
+++|.|+ ..++|+||+ ++|+++||.|+|+|++|. +||| +++|+++.....++.+ |...
T Consensus 192 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g--w~r~--------- 250 (479)
T 1v8b_A 192 KKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG--LMRA--------- 250 (479)
T ss_dssp TTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH--HHHH---------
T ss_pred cCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh--hhhc---------
Confidence 6899999 889999998 899999999999999999 9999 4568887666555442 3210
Q ss_pred cccccccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhc
Q psy13054 181 PAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSL 260 (1128)
Q Consensus 181 ~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l 260 (1128)
.+..+.||++||+|+|. +|+.+++++
T Consensus 251 ---------------------~~~~l~GktVgIIG~G~---------------------------------IG~~vA~~l 276 (479)
T 1v8b_A 251 ---------------------TDFLISGKIVVICGYGD---------------------------------VGKGCASSM 276 (479)
T ss_dssp ---------------------HCCCCTTSEEEEECCSH---------------------------------HHHHHHHHH
T ss_pred ---------------------cccccCCCEEEEEeeCH---------------------------------HHHHHHHHH
Confidence 01124568899999873 577888888
Q ss_pred cCCceeeeeeCCCCCCCCccccccCCccccceeecccccccc--cccccCCcccCHHHHhhcCCEEEEecCCCccccccc
Q psy13054 261 KGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERS--NGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLI 338 (1128)
Q Consensus 261 ~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~--~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lI 338 (1128)
+++++. ++++++.... .....|++..++++++++||+|++|+ +|+++|
T Consensus 277 ~~~G~~--------------------------Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~----~t~~lI 326 (479)
T 1v8b_A 277 KGLGAR--------------------------VYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT----GNVDVI 326 (479)
T ss_dssp HHHTCE--------------------------EEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC----SSSSSB
T ss_pred HhCcCE--------------------------EEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC----Chhhhc
Confidence 776543 3344433221 22345677789999999999999994 899999
Q ss_pred CHHHHhcCCCCcEEEEecCCCc-cCHHHHHH--HHHcCCeeEEEEecCCCCCCCCCCCcccC--CCCCCCCcccccccCC
Q psy13054 339 GRKQFSLMKPTAILINTSRGGL-LDQEALVE--FLKDKKIGGAGLDVMIPEPLPADHPLVQL--DNCGGAGLDVMIPEPL 413 (1128)
Q Consensus 339 n~~~l~~MK~gaiLINtaRG~l-VDe~AL~~--AL~sG~IagAaLDVfe~EPl~~~~pL~~l--pNvg~~~~~v~tph~~ 413 (1128)
|++.|++||+|++|||+|||++ ||+++|.+ ||++|+|+ +++||| |+|.++||+.+ ||+ ++| |.+
T Consensus 327 ~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~---plp~~~~l~~l~~~nv------v~t-H~a 395 (479)
T 1v8b_A 327 KLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRI---TLPNGNKIIVLARGRL------LNL-GCA 395 (479)
T ss_dssp CHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEE---ECTTSCEEEEEGGGSB------HHH-HSS
T ss_pred CHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEE---ECCCCCeeeEecCCCE------EEE-ecc
Confidence 9999999999999999999999 99999999 99999998 999998 44568999999 999 888 988
Q ss_pred CC
Q psy13054 414 PA 415 (1128)
Q Consensus 414 ~~ 415 (1128)
..
T Consensus 396 tg 397 (479)
T 1v8b_A 396 TG 397 (479)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 75
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.88 E-value=1.3e-22 Score=227.43 Aligned_cols=153 Identities=16% Similarity=0.140 Sum_probs=133.9
Q ss_pred CCChhhhhcCCCCccEEEEccccCCcCCh-hhhhhCCcEEEEcC------CCChhHHHHHHHHHHHHHHhccHHHHHHHH
Q psy13054 863 SRNKVKTPKRTENLKVITTFSVGYDHLEL-HEIKARGIRVGSVG------HISSDTVAEYNIGLAIAVSRRFQEGRKCIT 935 (1128)
Q Consensus 863 ~i~~~~l~~~~~~LK~I~~~~aGvd~idl-~a~~~~GI~V~n~p------~~~a~sVAE~alaliL~~~R~i~~~~~~~~ 935 (1128)
++++++++.+ |+||+|+ +|+|++|+ ++|+++||.|+|++ ++++.+|||++++++|...
T Consensus 85 ~~~~~~l~~~-~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~~----------- 149 (293)
T 3d4o_A 85 VLTEEMIEKT-PNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQHT----------- 149 (293)
T ss_dssp BCCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred cchHHHHHhC-CCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHhc-----------
Confidence 5789999997 9999997 89999998 89999999999998 8999999999999998531
Q ss_pred cCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc---cChHhhhccC
Q psy13054 936 SGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL---VPLDTLCAES 1011 (1128)
Q Consensus 936 ~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~---~~l~ell~~s 1011 (1128)
..++.|++|||||+|.||+.+|++|++|||+|++||++..+.. ..+.|+.. .++++++++|
T Consensus 150 ---------------~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~a 214 (293)
T 3d4o_A 150 ---------------DFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDV 214 (293)
T ss_dssp ---------------SSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTC
T ss_pred ---------------CCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCC
Confidence 1258999999999999999999999999999999997765433 34456553 4788999999
Q ss_pred CEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcc
Q psy13054 1012 DFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1012 DvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~l 1050 (1128)
|+|++|+|+ ++++++.|+.||+++++||++||..
T Consensus 215 DvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 215 DVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp SEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred CEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 999999996 7899999999999999999999764
No 76
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.86 E-value=2.9e-23 Score=246.45 Aligned_cols=226 Identities=15% Similarity=0.129 Sum_probs=182.4
Q ss_pred CccEE-EEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCcccc
Q psy13054 875 NLKVI-TTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMG 953 (1128)
Q Consensus 875 ~LK~I-~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~ 953 (1128)
+++-+ ...++|+|++ .++.++||.++|+++.|+ +|||+. +|++....+.+..+ |.+ .....
T Consensus 210 ~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~~-------~r~l~~~~~s~~~g-~~r-------~~~~~ 271 (494)
T 3ce6_A 210 SVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKSK-------FDNKYGTRHSLIDG-INR-------GTDAL 271 (494)
T ss_dssp HCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHT-------THHHHHHHHHHHHH-HHH-------HHCCC
T ss_pred CeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHHH-------HhhhhhhhhhhhHH-HHh-------ccCCC
Confidence 34444 4779999998 888999999999999999 999953 34444444433333 431 01125
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHH
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQ 1032 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~ 1032 (1128)
+.|++|+|+|+|.||+.+|++++++|++|+++|+...+.. +.+.|+...+++++++++|+|+.|++ |.++|+++.
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atg----t~~~i~~~~ 347 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATG----NKDIIMLEH 347 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSS----SSCSBCHHH
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCC----CHHHHHHHH
Confidence 7899999999999999999999999999999987766543 55678877789999999999999875 567899999
Q ss_pred HccCCCCcEEEEcCCCcc-cCHHHHHH-HHhcCCceEEEEeccCCCCCCCCCc--cccCCCeE----ECCCCCCCcHHHH
Q psy13054 1033 FSLMKPTAILVNTSRGGL-LDQEALVE-FLKDKKIGGAGLDVMIPEPLPADHP--LVQLDNCV----LTPHTSSATKAVR 1104 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~l-Vde~aL~~-aL~~g~i~gaaLDV~e~EPl~~~~p--L~~~pNvi----lTPHiag~t~e~~ 1104 (1128)
|+.||+|+++||+||+.. +|+++|.. +|++++|. +++|+++.+|. +++ |+..+|++ +|||+++.+.+.
T Consensus 348 l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~--~~~l~LL~~grlvnL~~~TPH~a~~~~~s- 423 (494)
T 3ce6_A 348 IKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDT--GRSIIVLSEGRLLNLGNATGHPSFVMSNS- 423 (494)
T ss_dssp HHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTT--CCEEEEEGGGSCHHHHHSCCSCHHHHHHH-
T ss_pred HHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCc--chHHHHHhCCCEEeccCCCCCccccchHH-
Confidence 999999999999999999 99999998 89888987 55899876432 344 66678998 999999988876
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCC
Q psy13054 1105 DEKSSTSAENIIRGYKGEPMIYEL 1128 (1128)
Q Consensus 1105 ~~~~~~~~~nl~~~l~G~~l~~~v 1128 (1128)
+...+.++++.|.+|+++.+.|
T Consensus 424 --~~~qa~~ai~~~~~g~~~~~~V 445 (494)
T 3ce6_A 424 --FANQTIAQIELWTKNDEYDNEV 445 (494)
T ss_dssp --HHHHHHHHHHHHHTGGGCCSSE
T ss_pred --HHHHHHHHHHHHHcCCCCCCEE
Confidence 4778999999999988776543
No 77
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.83 E-value=2.9e-20 Score=215.53 Aligned_cols=218 Identities=15% Similarity=0.212 Sum_probs=166.7
Q ss_pred HHhhccceeEEeecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEE----------EcCCCChhHHHHHHHH
Q psy13054 849 KLLKAFKVSKILYTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVG----------SVGHISSDTVAEYNIG 918 (1128)
Q Consensus 849 ~~l~~~~~~~~~~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~----------n~p~~~a~sVAE~ala 918 (1128)
+..++++++..+..++++++.... ++..++.....++|...++++.++||++. |.|.++ +.||++..
T Consensus 63 ~~~~~adii~~vk~p~~~e~~~l~-~~~~l~~~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s--~~ae~ag~ 139 (377)
T 2vhw_A 63 QVWADADLLLKVKEPIAAEYGRLR-HGQILFTFLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLA--PMSEVAGR 139 (377)
T ss_dssp HHHHHCSEEECSSCCCGGGGGGCC-TTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTH--HHHHHHHH
T ss_pred HHhccCCEEEEeCCCChHHHhhcC-CCCEEEEEecccCCHHHHHHHHHcCCeEEEeeeccccCCCccccC--chHHHHHH
Confidence 344556655433456666666655 77777777788889999999999999997 555554 56699985
Q ss_pred HHHHHH-hccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh
Q psy13054 919 LAIAVS-RRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA 996 (1128)
Q Consensus 919 liL~~~-R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~ 996 (1128)
+++.+. |++ ...+.|+|. .+. ...++.|++|+|+|+|.||+.+|+.++++|++|+++|++..+.+ ..+
T Consensus 140 ~a~~~a~r~l----~~~~~g~~~-----~~~-~~~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 140 LAAQVGAYHL----MRTQGGRGV-----LMG-GVPGVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDA 209 (377)
T ss_dssp HHHHHHHHHT----SGGGTSCCC-----CTT-CBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHH----HHhcCCCcc-----ccc-CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 554444 665 234445543 111 23378999999999999999999999999999999997765543 222
Q ss_pred -cCCc-------ccChHhhhccCCEEEEec--CCCcccccccCHHHHccCCCCcEEEEcC--CCcccCHHHHHHHHhcCC
Q psy13054 997 -LGAQ-------LVPLDTLCAESDFIFVTC--ALTKDTEQLIGRKQFSLMKPTAILVNTS--RGGLLDQEALVEFLKDKK 1064 (1128)
Q Consensus 997 -~g~~-------~~~l~ell~~sDvV~l~l--Plt~~T~~li~~~~l~~mk~ga~lIN~a--RG~lVde~aL~~aL~~g~ 1064 (1128)
.|.. ..+++++++++|+|+.++ |.+ +|.++++++.++.||+|+++||+| +|+
T Consensus 210 ~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg--------------- 273 (377)
T 2vhw_A 210 EFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG--------------- 273 (377)
T ss_dssp HTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC---------------
T ss_pred hcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCcceecHHHHhcCCCCcEEEEEecCCCC---------------
Confidence 3432 236788999999999966 655 889999999999999999999999 332
Q ss_pred ceEEEEeccCC-CCCCCCCccccCCCeE--ECCCCCCCcHH
Q psy13054 1065 IGGAGLDVMIP-EPLPADHPLVQLDNCV--LTPHTSSATKA 1102 (1128)
Q Consensus 1065 i~gaaLDV~e~-EPl~~~~pL~~~pNvi--lTPHiag~t~e 1102 (1128)
||+. ||.+.++|+|..+||+ +|||+++.+..
T Consensus 274 -------v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~ 307 (377)
T 2vhw_A 274 -------CFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPK 307 (377)
T ss_dssp -------SBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHH
T ss_pred -------ccccccCCCCCCCEEEECCEEEEecCCcchhhHH
Confidence 7888 9999899999999998 99999999876
No 78
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.82 E-value=2.2e-20 Score=209.99 Aligned_cols=158 Identities=15% Similarity=0.154 Sum_probs=128.1
Q ss_pred CChhhhhcCCCCccEEEEccccCCcCC-hhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccc
Q psy13054 864 RNKVKTPKRTENLKVITTFSVGYDHLE-LHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALK 942 (1128)
Q Consensus 864 i~~~~l~~~~~~LK~I~~~~aGvd~id-l~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~ 942 (1128)
+++++++.+ |++|+|+ +|+|++| +++|.++||.|+|+|+++ ++ ++.|++..+ +|.|...
T Consensus 88 ~~~~~l~~~-~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~~~~~ 147 (300)
T 2rir_A 88 LKQDHLDRT-PAHCVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGTIMLA 147 (300)
T ss_dssp CCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHHHHHH
T ss_pred chHHHHhhc-CCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHHHHHH
Confidence 789999997 9999998 8999999 999999999999999975 33 234555443 3445310
Q ss_pred cccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCc---ccChHhhhccCCEEEEec
Q psy13054 943 QTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQ---LVPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 943 ~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~---~~~l~ell~~sDvV~l~l 1018 (1128)
......+++|++|||||+|.||+.+|++|++|||+|++||++..+.. ..+.|++ ..++++++++||+|++|+
T Consensus 148 ----~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~ 223 (300)
T 2rir_A 148 ----IQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTI 223 (300)
T ss_dssp ----HHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECC
T ss_pred ----HHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECC
Confidence 01122479999999999999999999999999999999997765433 3344554 357899999999999999
Q ss_pred CCCcccccccCHHHHccCCCCcEEEEcCCCcc
Q psy13054 1019 ALTKDTEQLIGRKQFSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1019 Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~l 1050 (1128)
|+ ++++++.|+.||+++++||++||..
T Consensus 224 p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 224 PS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp SS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred Ch-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 97 6899999999999999999999864
No 79
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.78 E-value=2.1e-19 Score=201.32 Aligned_cols=158 Identities=16% Similarity=0.170 Sum_probs=127.2
Q ss_pred ccCCCeEEEeccCCCCchHHHHhccc-ccEEEeCCCCC------CCCHHHHHHHhcCcceeeec----------------
Q psy13054 511 IMSKPKLFLTRDDYSRVPAFEILGEM-FDIITYPASEG------QIPRDIFIEKLRGCSALLCT---------------- 567 (1128)
Q Consensus 511 ~m~k~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---------------- 567 (1128)
+|+++||++...+......++.|.+. +++..+..++. ....+++.+.+.+||+++++
T Consensus 2 ~~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~ 81 (293)
T 3d4o_A 2 MLTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSN 81 (293)
T ss_dssp CCTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCS
T ss_pred CccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeeccccc
Confidence 47889999986554444567777765 45554432222 22446777889999999985
Q ss_pred cccccchhhhhccCCceecccccCCCccccccCCCCCceeeeecccccccCCCeEEEEEcccccCccch-HHHHHcCCeE
Q psy13054 568 SRDRVDKQVLDESGGYRCTEDFFGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITTFSVGYDHLEL-HEIKARGIRV 646 (1128)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Lk~I~~~g~G~D~iD~-~~a~~~gI~v 646 (1128)
..+++++++|+.. |+||+|+ +|+||+|+ ++|+++||.|
T Consensus 82 ~~~~~~~~~l~~~--------------------------------------~~l~~i~---~G~d~id~~~~~~~~gi~v 120 (293)
T 3d4o_A 82 ESIVLTEEMIEKT--------------------------------------PNHCVVY---SGISNTYLNQCMKKTNRTL 120 (293)
T ss_dssp CCCBCCHHHHHTS--------------------------------------CTTCEEE---ESSCCHHHHHHHHHHTCEE
T ss_pred CCccchHHHHHhC--------------------------------------CCCCEEE---ecCCCHHHHHHHHHcCCeE
Confidence 3456888888887 8999997 89999998 9999999999
Q ss_pred EecC------CCchHhHHHHHHHHHHHHHHhhhhhhhhhhcCccccccccccCCccCCCCCCEEEEEecChhhHHHHHHH
Q psy13054 647 GSVG------HISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLL 720 (1128)
Q Consensus 647 ~n~p------g~~~~aVAE~ai~llLa~~R~i~~~~~~~r~G~W~~~~~~~~~~~~~~l~gktvGIiG~G~IG~~va~r~ 720 (1128)
+|+| ++|+.+|||++++++|.. .+.++.|||+||||+|+||+.+|+++
T Consensus 121 ~~~~~~~~~~~~~~~svae~a~~~~l~~--------------------------~~~~l~g~~v~IiG~G~iG~~~a~~l 174 (293)
T 3d4o_A 121 VKLMERDDIAIYNSIPTAEGTIMMAIQH--------------------------TDFTIHGANVAVLGLGRVGMSVARKF 174 (293)
T ss_dssp EEGGGCHHHHHHHHHHHHHHHHHHHHHH--------------------------CSSCSTTCEEEEECCSHHHHHHHHHH
T ss_pred EEecCCceeeeeccHhHHHHHHHHHHHh--------------------------cCCCCCCCEEEEEeeCHHHHHHHHHH
Confidence 9998 899999999999999863 12468999999999999999999999
Q ss_pred hhCCCeEEEEcCCCc
Q psy13054 721 KAFKVSKILYTSRRV 735 (1128)
Q Consensus 721 ~afg~~vi~y~~~~~ 735 (1128)
++|||+|++||+...
T Consensus 175 ~~~G~~V~~~dr~~~ 189 (293)
T 3d4o_A 175 AALGAKVKVGARESD 189 (293)
T ss_dssp HHTTCEEEEEESSHH
T ss_pred HhCCCEEEEEECCHH
Confidence 999999999998543
No 80
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.73 E-value=2e-19 Score=210.02 Aligned_cols=152 Identities=15% Similarity=0.224 Sum_probs=127.8
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhh-CCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCE-EEEecCCCcccccccCHH
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKA-FKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDF-IFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~a-fG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDv-V~l~lPlt~~T~~li~~~ 1031 (1128)
++||||||+|+|+||+.+|++|++ |||+|++|++.... . ......++++|++.+|. .++ +|+ ++|++ |+.+
T Consensus 210 l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~-~---~~~~gvdl~~L~~~~d~~~~l-~~l-~~t~~-i~~~ 282 (419)
T 1gtm_A 210 LKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGG-I---YNPDGLNADEVLKWKNEHGSV-KDF-PGATN-ITNE 282 (419)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCE-E---EEEEEECHHHHHHHHHHHSSS-TTC-TTSEE-ECHH
T ss_pred cCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcc-c---cCccCCCHHHHHHHHHhcCEe-ecC-ccCee-eCHH
Confidence 899999999999999999999999 99999999544332 1 11123477888776654 333 677 68888 8999
Q ss_pred HHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCC-CccccCCCeEECCCC----C---------
Q psy13054 1032 QFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPAD-HPLVQLDNCVLTPHT----S--------- 1097 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~-~pL~~~pNvilTPHi----a--------- 1097 (1128)
.|..||+ .+|||+|||.+||+++ +++|+.+.|.++| +||++++ +|||..+||++|||+ |
T Consensus 283 ~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt~s~~E~ 355 (419)
T 1gtm_A 283 ELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVTVSYFEW 355 (419)
T ss_dssp HHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHHHHHHHH
T ss_pred HHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcceeeeehh
Confidence 9999998 5999999999999999 6999999999987 8998754 799999999999999 6
Q ss_pred --------CCcHHHHHHHHHHHHHHHHHHH
Q psy13054 1098 --------SATKAVRDEKSSTSAENIIRGY 1119 (1128)
Q Consensus 1098 --------g~t~e~~~~~~~~~~~nl~~~l 1119 (1128)
|.+++..+++.+.+.+++.+++
T Consensus 356 ~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 356 VQNITGYYWTIEEVRERLDKKMTKAFYDVY 385 (419)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 6788899999999999998876
No 81
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.69 E-value=2.6e-17 Score=184.88 Aligned_cols=164 Identities=14% Similarity=0.151 Sum_probs=121.4
Q ss_pred ccCCCeEEEeccCCCCchHHHHhcccc-cEEEeCCCCCCC------CHHHHHHHhcCcceeee---cc-----------c
Q psy13054 511 IMSKPKLFLTRDDYSRVPAFEILGEMF-DIITYPASEGQI------PRDIFIEKLRGCSALLC---TS-----------R 569 (1128)
Q Consensus 511 ~m~k~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~---~~-----------~ 569 (1128)
+|+++||++...+......++.|.+.+ ++..+..++... ..+++.+.+.+||++++ +. .
T Consensus 4 ~~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~ 83 (300)
T 2rir_A 4 MLTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSN 83 (300)
T ss_dssp CCCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCS
T ss_pred cccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEeccccccCCccccccccc
Confidence 578889999966544445677777654 444332222211 23345677889999987 22 3
Q ss_pred cc--cchhhhhccCCceecccccCCCccccccCCCCCceeeeecccccccCCCeEEEEEcccccCccc-hHHHHHcCCeE
Q psy13054 570 DR--VDKQVLDESGGYRCTEDFFGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITTFSVGYDHLE-LHEIKARGIRV 646 (1128)
Q Consensus 570 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Lk~I~~~g~G~D~iD-~~~a~~~gI~v 646 (1128)
++ +++++++.. |++|+|+ +|+||+| +++|+++||.|
T Consensus 84 ~~~~~~~~~l~~~--------------------------------------~~l~~i~---~g~~~~d~~~~~~~~gi~v 122 (300)
T 2rir_A 84 EEVVLKQDHLDRT--------------------------------------PAHCVIF---SGISNAYLENIAAQAKRKL 122 (300)
T ss_dssp SCEECCHHHHHTS--------------------------------------CTTCEEE---ESSCCHHHHHHHHHTTCCE
T ss_pred CCccchHHHHhhc--------------------------------------CCCCEEE---EecCCHHHHHHHHHCCCEE
Confidence 44 788888776 7999998 8999999 99999999999
Q ss_pred EecCCCchHhHHHHHHHHHHHHHHhhhhhhhhhhcCccccccccccCCccCCCCCCEEEEEecChhhHHHHHHHhhCCCe
Q psy13054 647 GSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVS 726 (1128)
Q Consensus 647 ~n~pg~~~~aVAE~ai~llLa~~R~i~~~~~~~r~G~W~~~~~~~~~~~~~~l~gktvGIiG~G~IG~~va~r~~afg~~ 726 (1128)
+|+|+++ +| ++.|++..+ +|.|..... ..+.+++|+|+||||+|+||+++|+++++|||+
T Consensus 123 ~~~~~~~--~v---------~~~r~~~~~-----~g~~~~~~~----~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~ 182 (300)
T 2rir_A 123 VKLFERD--DI---------AIYNSIPTV-----EGTIMLAIQ----HTDYTIHGSQVAVLGLGRTGMTIARTFAALGAN 182 (300)
T ss_dssp EEGGGSH--HH---------HHHHHHHHH-----HHHHHHHHH----TCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EeecCCC--ce---------EEEcCccHH-----HHHHHHHHH----hcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCE
Confidence 9999985 33 346776555 566743211 235689999999999999999999999999999
Q ss_pred EEEEcCCCc
Q psy13054 727 KILYTSRRV 735 (1128)
Q Consensus 727 vi~y~~~~~ 735 (1128)
|++||+...
T Consensus 183 V~~~d~~~~ 191 (300)
T 2rir_A 183 VKVGARSSA 191 (300)
T ss_dssp EEEEESSHH
T ss_pred EEEEECCHH
Confidence 999998643
No 82
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.68 E-value=3.9e-17 Score=188.77 Aligned_cols=243 Identities=15% Similarity=0.180 Sum_probs=158.8
Q ss_pred ccceeEEeecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEE---EcCCC-Ch----hHHHHHHH--HHHHH
Q psy13054 853 AFKVSKILYTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVG---SVGHI-SS----DTVAEYNI--GLAIA 922 (1128)
Q Consensus 853 ~~~~~~~~~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~---n~p~~-~a----~sVAE~al--aliL~ 922 (1128)
+++++.-...++ .+.++.+.+++++|.....+.|..+++++.++||++. +.+.. .. .++++.+- +.+++
T Consensus 65 ~ad~il~vk~p~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a 143 (369)
T 2eez_A 65 GAEMVVKVKEPL-PEEYGFLREGLILFTYLHLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVG 143 (369)
T ss_dssp TSSEEECSSCCC-GGGGGGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCC-HHHHhhcCCCcEEEEEecccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHH
Confidence 455543333444 4446664478999999999999999999999999998 44432 11 44555444 44433
Q ss_pred HHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh-cCCc
Q psy13054 923 VSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA-LGAQ 1000 (1128)
Q Consensus 923 ~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~-~g~~ 1000 (1128)
+.+ +..... .++.|. ....++.+++|+|+|.|.||+.+++.++++|++|+++|++..+.+ ..+ .+..
T Consensus 144 ~~~-l~~~~~--g~~~~~--------~~~~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~ 212 (369)
T 2eez_A 144 AQF-LEKPKG--GRGVLL--------GGVPGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR 212 (369)
T ss_dssp HHH-TSGGGT--SCCCCT--------TCBTBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS
T ss_pred HHH-HHHhcC--CCceec--------CCCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce
Confidence 322 221110 011222 122378999999999999999999999999999999997765433 222 3432
Q ss_pred -------ccChHhhhccCCEEEEecCCCc-ccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEec
Q psy13054 1001 -------LVPLDTLCAESDFIFVTCALTK-DTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDV 1072 (1128)
Q Consensus 1001 -------~~~l~ell~~sDvV~l~lPlt~-~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV 1072 (1128)
..+++++++++|+|+.|++... .+.+++.++.++.||+++++||+|-. .| |+ +||
T Consensus 213 ~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~ 275 (369)
T 2eez_A 213 VITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VET 275 (369)
T ss_dssp EEEEECCHHHHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEECC--------------------------
T ss_pred EEEecCCHHHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCc
Confidence 2357788999999999999776 68889999999999999999999821 12 54 999
Q ss_pred cCCCCCCCCCccccCCCeE---------ECCCCCCC--cHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy13054 1073 MIPEPLPADHPLVQLDNCV---------LTPHTSSA--TKAVRDEKSSTSAENIIRGYKGEPMIY 1126 (1128)
Q Consensus 1073 ~e~EPl~~~~pL~~~pNvi---------lTPHiag~--t~e~~~~~~~~~~~nl~~~l~G~~l~~ 1126 (1128)
+ ||.+.++|++..+|+. +|||+|+. +.+.+..+.+.+.+++..+..++++.+
T Consensus 276 ~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~~g~~~~~~~~~l~~ 338 (369)
T 2eez_A 276 I--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAEKGLDALLEDAALLK 338 (369)
T ss_dssp ------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCHHHHT
T ss_pred c--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHhcChhhhhcChHHhc
Confidence 8 7877788999999999 89998884 577888999999988877777765443
No 83
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.62 E-value=1.1e-15 Score=177.48 Aligned_cols=155 Identities=16% Similarity=0.219 Sum_probs=118.1
Q ss_pred ccccCCcC-ChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEE
Q psy13054 882 FSVGYDHL-ELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVG 960 (1128)
Q Consensus 882 ~~aGvd~i-dl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvG 960 (1128)
.++|+..+ .+.+..+.+|+|.|++...+.+..+...+..-++...+ . +. ...++.||+||
T Consensus 155 TttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi----~--ra-------------tg~~L~GktVg 215 (436)
T 3h9u_A 155 TTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGI----K--RA-------------TDVMIAGKTAC 215 (436)
T ss_dssp SHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHH----H--HH-------------HCCCCTTCEEE
T ss_pred cCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHH----H--Hh-------------cCCcccCCEEE
Confidence 34555543 24456689999999987555444433333222222211 1 11 11258999999
Q ss_pred EEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHccCCCC
Q psy13054 961 IVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPT 1039 (1128)
Q Consensus 961 IIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~g 1039 (1128)
|+|+|.||+.+|++|++|||+|+++|++..+.. +...|++.++++|++++||||++ ++.|+++|+++.|++||+|
T Consensus 216 IiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVil----t~gt~~iI~~e~l~~MK~g 291 (436)
T 3h9u_A 216 VCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVT----TTGNDDIITSEHFPRMRDD 291 (436)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEE----CSSCSCSBCTTTGGGCCTT
T ss_pred EEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEE----CCCCcCccCHHHHhhcCCC
Confidence 999999999999999999999999987654443 45678888899999999999995 5678999999999999999
Q ss_pred cEEEEcCCCcc-cCHHHHHHH
Q psy13054 1040 AILVNTSRGGL-LDQEALVEF 1059 (1128)
Q Consensus 1040 a~lIN~aRG~l-Vde~aL~~a 1059 (1128)
+++||+|||.+ ||.++|.+.
T Consensus 292 AIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 292 AIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp EEEEECSSSGGGBCHHHHHHH
T ss_pred cEEEEeCCCCCccCHHHHHhh
Confidence 99999999997 999999864
No 84
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.59 E-value=2.6e-15 Score=174.02 Aligned_cols=153 Identities=17% Similarity=0.201 Sum_probs=116.7
Q ss_pred cccCCcC-ChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEE
Q psy13054 883 SVGYDHL-ELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGI 961 (1128)
Q Consensus 883 ~aGvd~i-dl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGI 961 (1128)
++|+-.+ ......+..+++.|+.. |+..+-+.....+.+.+.....+.. ...+.|||+||
T Consensus 192 tTGv~rL~~m~~~g~L~~PvinVnd----s~tK~~fDn~yG~~eslvdgI~Rat---------------g~~L~GKTVgV 252 (464)
T 3n58_A 192 TTGVNRLYQLQKKGLLPFPAINVND----SVTKSKFDNKYGCKESLVDGIRRGT---------------DVMMAGKVAVV 252 (464)
T ss_dssp HHHHHHHHHHHHHTCCCSCEEECTT----SHHHHTTHHHHHHHHHHHHHHHHHH---------------CCCCTTCEEEE
T ss_pred ccchHHHHHHHHcCCCCCCEEeecc----HhhhhhhhhhhcchHHHHHHHHHhc---------------CCcccCCEEEE
Confidence 4555443 12333456789999864 5666666555555544443332111 12589999999
Q ss_pred EEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCc
Q psy13054 962 VGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTA 1040 (1128)
Q Consensus 962 IG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga 1040 (1128)
+|+|.||+.+|++|++|||+|++++..+.+.. +...|++.+++++++++||||+++. .|+++|+++.|++||+|+
T Consensus 253 IG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GA 328 (464)
T 3n58_A 253 CGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMC 328 (464)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTE
T ss_pred ECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCe
Confidence 99999999999999999999999986544332 4456888889999999999999853 578999999999999999
Q ss_pred EEEEcCCCcc-cCHHHHHH
Q psy13054 1041 ILVNTSRGGL-LDQEALVE 1058 (1128)
Q Consensus 1041 ~lIN~aRG~l-Vde~aL~~ 1058 (1128)
+|||+|||.+ ||.++|.+
T Consensus 329 ILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 329 IVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp EEEECSSSTTTBTCGGGTT
T ss_pred EEEEcCCCCcccCHHHHHh
Confidence 9999999998 99999974
No 85
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.58 E-value=9.2e-15 Score=169.39 Aligned_cols=250 Identities=11% Similarity=0.115 Sum_probs=169.6
Q ss_pred ccchhhhhhhhccCCceEEEcCCC--CCCCCHHHHH-----------HhcCCceEEEeCCCCCCCHHHHhccCCCceEEE
Q psy13054 42 LLVPESLSKLRFNSRFDIDTYPVS--EGRMPRDIFI-----------EKLKGCSALLCNPHQKVDKEVLDRSGENLKVIA 108 (1128)
Q Consensus 42 ~l~~~~l~~l~~~~~~~v~~~~~~--~~~~~~eel~-----------~~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~ 108 (1128)
.+.|+...+|.. ..++|.+-+.. ....+.+++. +..+++|+|+ ....++++++.... ++..+++
T Consensus 17 ~ltP~~v~~L~~-~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii~-~vk~p~~~e~~~l~-~~~~l~~ 93 (377)
T 2vhw_A 17 AITPAGVAELTR-RGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLL-KVKEPIAAEYGRLR-HGQILFT 93 (377)
T ss_dssp SCCHHHHHHHHH-TTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEEE-CSSCCCGGGGGGCC-TTCEEEE
T ss_pred CcCHHHHHHHHh-CCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEEE-EeCCCChHHHhhcC-CCCEEEE
Confidence 688899888853 46788663311 1134556655 3345689775 45677888887754 7888888
Q ss_pred EcCcccccccHHHHHhCCcEEE----------ecCCCCchhHHHHHHHHHHHHh-hchHHHHHHHHhhhhhHHHHhhccC
Q psy13054 109 TFSVGHDHLHLDEIKSRGIRVG----------TVGPVSSDTVAEYNIGLAIAVS-RRFQQRHNWIARLSSFAEIQTRALD 177 (1128)
Q Consensus 109 ~~gvG~DnIDl~aa~erGI~V~----------n~pg~~~~aVAE~alalmL~l~-R~i~~~~~~~~~~~~~~~~~~~~~~ 177 (1128)
....++|...++++.++||++. |+|.+++.+ |++.++++.+. |++.... .+ +
T Consensus 94 ~~~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s~~a--e~ag~~a~~~a~r~l~~~~----~g-~---------- 156 (377)
T 2vhw_A 94 FLHLAASRACTDALLDSGTTSIAYETVQTADGALPLLAPMS--EVAGRLAAQVGAYHLMRTQ----GG-R---------- 156 (377)
T ss_dssp CCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHH--HHHHHHHHHHHHHHTSGGG----TS-C----------
T ss_pred EecccCCHHHHHHHHHcCCeEEEeeeccccCCCccccCchH--HHHHHHHHHHHHHHHHHhc----CC-C----------
Confidence 8888999999999999999998 677776554 99985555554 6663211 00 0
Q ss_pred CCCcccccccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHh
Q psy13054 178 TKFPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEIN 257 (1128)
Q Consensus 178 ~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va 257 (1128)
+.|. .+ +. ...+++++|+|.|. +|+.++
T Consensus 157 ~~~~------~~-----------~~--~l~g~~V~ViG~G~---------------------------------iG~~~a 184 (377)
T 2vhw_A 157 GVLM------GG-----------VP--GVEPADVVVIGAGT---------------------------------AGYNAA 184 (377)
T ss_dssp CCCT------TC-----------BT--TBCCCEEEEECCSH---------------------------------HHHHHH
T ss_pred cccc------cC-----------CC--CCCCCEEEEECCCH---------------------------------HHHHHH
Confidence 1110 00 00 13457888888752 566777
Q ss_pred hhccCCceeeeeeCCCCCCCCccccccCCccccceeecccccccc--c-ccccCC-------cccCHHHHhhcCCEEEEe
Q psy13054 258 NSLKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERS--N-GTALGA-------QLVPLDTLCAESDFIFVT 327 (1128)
Q Consensus 258 ~~l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~--~-~~~~g~-------~~vsLdeLl~~SDiVslh 327 (1128)
+.++++++.+. .++..... . .+.+|. ...+++++++++|+|+.+
T Consensus 185 ~~a~~~Ga~V~--------------------------~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 185 RIANGMGATVT--------------------------VLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp HHHHHTTCEEE--------------------------EEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEEC
T ss_pred HHHHhCCCEEE--------------------------EEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEEC
Confidence 77766554321 22211100 0 011222 234688999999999994
Q ss_pred --cCCCcccccccCHHHHhcCCCCcEEEEec--CCCccCHHHHHHHHHcCCeeEEEEecCCC-CCCCCCCCcccCCCCCC
Q psy13054 328 --CALTKDTEQLIGRKQFSLMKPTAILINTS--RGGLLDQEALVEFLKDKKIGGAGLDVMIP-EPLPADHPLVQLDNCGG 402 (1128)
Q Consensus 328 --~PLT~~T~~lIn~~~l~~MK~gaiLINta--RG~lVDe~AL~~AL~sG~IagAaLDVfe~-EPl~~~~pL~~lpNvg~ 402 (1128)
+|.+ +|.++|+++.++.||+|+++||+| ||+ ||+. ||.+.++|++.++|+
T Consensus 239 ~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v-- 293 (377)
T 2vhw_A 239 VLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDT-- 293 (377)
T ss_dssp CCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTE--
T ss_pred CCcCCC-CCcceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCE--
Confidence 4776 899999999999999999999999 553 8998 998889999999998
Q ss_pred CCccc--ccccCCCCChh
Q psy13054 403 AGLDV--MIPEPLPADHP 418 (1128)
Q Consensus 403 ~~~~v--~tph~~~~t~~ 418 (1128)
. .+||+++++..
T Consensus 294 ----~i~~~phl~~~~~~ 307 (377)
T 2vhw_A 294 ----LFYCVANMPASVPK 307 (377)
T ss_dssp ----EEECBTTGGGGSHH
T ss_pred ----EEEecCCcchhhHH
Confidence 6 89999998753
No 86
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.56 E-value=7.3e-16 Score=183.16 Aligned_cols=198 Identities=13% Similarity=0.060 Sum_probs=142.5
Q ss_pred EEEEcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCccccc
Q psy13054 106 VIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQQ 185 (1128)
Q Consensus 106 ~I~~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (1128)
++-..++|+|++ .++.++||.++|++++|. +|||+ .+|+++........+ |.. .
T Consensus 214 vveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~-------~~r~l~~~~~s~~~g--~~r----~---------- 267 (494)
T 3ce6_A 214 VTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKS-------KFDNKYGTRHSLIDG--INR----G---------- 267 (494)
T ss_dssp EEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------TTHHHHHHHHHHHHH--HHH----H----------
T ss_pred EEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHH-------HHhhhhhhhhhhhHH--HHh----c----------
Confidence 344789999998 788999999999999999 99994 345554432222111 110 0
Q ss_pred ccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCce
Q psy13054 186 NLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDI 265 (1128)
Q Consensus 186 ~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~ 265 (1128)
.+....|++++|+|+|. ||+.+++.++++++
T Consensus 268 ----------------~~~~l~GktV~IiG~G~---------------------------------IG~~~A~~lka~Ga 298 (494)
T 3ce6_A 268 ----------------TDALIGGKKVLICGYGD---------------------------------VGKGCAEAMKGQGA 298 (494)
T ss_dssp ----------------HCCCCTTCEEEEECCSH---------------------------------HHHHHHHHHHHTTC
T ss_pred ----------------cCCCCCcCEEEEEccCH---------------------------------HHHHHHHHHHHCCC
Confidence 00113467888998863 56677777766543
Q ss_pred eeeeeCCCCCCCCccccccCCccccceeeccccccc--ccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHH
Q psy13054 266 FEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFER--SNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQF 343 (1128)
Q Consensus 266 ~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~--~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l 343 (1128)
. ++.++..+. ..+.+.|++.++++++++.||+|+.|+ .|.++|+++.|
T Consensus 299 ~--------------------------Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~at----gt~~~i~~~~l 348 (494)
T 3ce6_A 299 R--------------------------VSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTAT----GNKDIIMLEHI 348 (494)
T ss_dssp E--------------------------EEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECS----SSSCSBCHHHH
T ss_pred E--------------------------EEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECC----CCHHHHHHHHH
Confidence 2 233332221 123446777789999999999999986 57789999999
Q ss_pred hcCCCCcEEEEecCCCc-cCHHHHHH-HHHcCCeeEEEEecCCCCCCCCCCC--cccCCCCCCCCccc----ccccCCCC
Q psy13054 344 SLMKPTAILINTSRGGL-LDQEALVE-FLKDKKIGGAGLDVMIPEPLPADHP--LVQLDNCGGAGLDV----MIPEPLPA 415 (1128)
Q Consensus 344 ~~MK~gaiLINtaRG~l-VDe~AL~~-AL~sG~IagAaLDVfe~EPl~~~~p--L~~lpNvg~~~~~v----~tph~~~~ 415 (1128)
+.||+|+++||+||+.+ ||+++|.+ +|++++|. +++|||+.+| .+++ ++..+++ + .|||+++.
T Consensus 349 ~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~--~~~~l~LL~~grl------vnL~~~TPH~a~~ 419 (494)
T 3ce6_A 349 KAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGD--TGRSIIVLSEGRL------LNLGNATGHPSFV 419 (494)
T ss_dssp HHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTT--TCCEEEEEGGGSC------HHHHHSCCSCHHH
T ss_pred HhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCC--cchHHHHHhCCCE------EeccCCCCCcccc
Confidence 99999999999999999 99999999 89999997 6789987643 2455 5566776 5 78998765
Q ss_pred Ch
Q psy13054 416 DH 417 (1128)
Q Consensus 416 t~ 417 (1128)
+.
T Consensus 420 ~~ 421 (494)
T 3ce6_A 420 MS 421 (494)
T ss_dssp HH
T ss_pred ch
Confidence 44
No 87
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.53 E-value=8.6e-15 Score=170.86 Aligned_cols=181 Identities=15% Similarity=0.191 Sum_probs=132.6
Q ss_pred CChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHH---HHHHhccHHHHHHHHcCCCc
Q psy13054 864 RNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLA---IAVSRRFQEGRKCITSGEWA 940 (1128)
Q Consensus 864 i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alali---L~~~R~i~~~~~~~~~g~w~ 940 (1128)
.+++.++.+.+++++|+..+.|+|++|++++.++||+|.+ .++|+|++.++. |+....+.. ...++.+.|.
T Consensus 82 p~~~~i~~l~~~~~li~~~~~~~d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag-~~av~~~~~~ 155 (401)
T 1x13_A 82 PLDDEIALLNPGTTLVSFIWPAQNPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAG-YRAIVEAAHE 155 (401)
T ss_dssp CCHHHHTTCCTTCEEEECCCGGGCHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHH-HHHHHHHHHH
T ss_pred CCHHHHHHhcCCCcEEEEecCCCCHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHH-HHHHHHHHHh
Confidence 3567777755789999999999999999999999999964 455566555553 333333322 2233333322
Q ss_pred cccccccCCc---ccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc--------------
Q psy13054 941 LKQTHIIGPN---IMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-------------- 1002 (1128)
Q Consensus 941 ~~~~~~~~~~---~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-------------- 1002 (1128)
...+ .... ..++.|++|+|+|+|.||+.+++.++++|++|+++|++..+.+ ..+.|.+.+
T Consensus 156 ~~~~--~~~~~~~~g~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~ 233 (401)
T 1x13_A 156 FGRF--FTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGY 233 (401)
T ss_dssp CSSC--SSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHH
T ss_pred cccc--cCCceeeccCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccc
Confidence 0000 0000 1158899999999999999999999999999999998776544 445565543
Q ss_pred --------------ChHhhhccCCEEEEe--cCCCcccccccCHHHHccCCCCcEEEEcC--CCcccCH
Q psy13054 1003 --------------PLDTLCAESDFIFVT--CALTKDTEQLIGRKQFSLMKPTAILVNTS--RGGLLDQ 1053 (1128)
Q Consensus 1003 --------------~l~ell~~sDvV~l~--lPlt~~T~~li~~~~l~~mk~ga~lIN~a--RG~lVde 1053 (1128)
+++++++.+|+|+.| +|.. .+.++++++.++.||+|+++||+| ||+.+++
T Consensus 234 ~~~~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 234 AKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred hhhccHHHHHHHHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 267888999999999 5543 467899999999999999999999 8887765
No 88
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.52 E-value=4e-16 Score=182.41 Aligned_cols=215 Identities=14% Similarity=0.186 Sum_probs=165.2
Q ss_pred CCccEEEEccccCCcCChhhhh-----hCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccc-ccc
Q psy13054 874 ENLKVITTFSVGYDHLELHEIK-----ARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQT-HII 947 (1128)
Q Consensus 874 ~~LK~I~~~~aGvd~idl~a~~-----~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~-~~~ 947 (1128)
+.+++|...++|+|++++.++. ++++.+++.+|. ..+++++.+.+++.+.|++...... ..+.|..... ...
T Consensus 80 ~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~-~~~~~s~a~~av~~ 157 (404)
T 1gpj_A 80 EAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRI-SEGAVSIGSAAVEL 157 (404)
T ss_dssp HHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSST-TCSCCSHHHHHHHH
T ss_pred hHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhh-cCCCccHHHHHHHH
Confidence 5689999999999999999998 889999999888 5799999999999999988765432 3444531000 000
Q ss_pred CC-cccccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCch-h-hhhcCCcc---cChHhhhccCCEEEEecCC
Q psy13054 948 GP-NIMGLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKE-E-GTALGAQL---VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 948 ~~-~~~~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~-~-~~~~g~~~---~~l~ell~~sDvV~l~lPl 1020 (1128)
.. ...++.|++|+|||+|.||+.+++.|+++|+ +|+++|++..+. . +...|... .++++++.++|+|+.|+|.
T Consensus 158 a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~ 237 (404)
T 1gpj_A 158 AERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAA 237 (404)
T ss_dssp HHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSS
T ss_pred HHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCC
Confidence 00 0114789999999999999999999999999 999998766553 2 34455543 3677888999999999764
Q ss_pred CcccccccCHHHHcc--CC----CCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEE--
Q psy13054 1021 TKDTEQLIGRKQFSL--MK----PTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVL-- 1092 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~--mk----~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvil-- 1092 (1128)
+.++++++.++. || ++.++||++ +|.+.+++++++|||.+
T Consensus 238 ---~~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~d 285 (404)
T 1gpj_A 238 ---PHPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVRT 285 (404)
T ss_dssp ---SSCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEEE
T ss_pred ---CCceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEEe
Confidence 456788888887 43 566777765 47666789999999999
Q ss_pred CCCCCCCcHHHHH----------HHHHHHHHHHHHHHcCC
Q psy13054 1093 TPHTSSATKAVRD----------EKSSTSAENIIRGYKGE 1122 (1128)
Q Consensus 1093 TPHiag~t~e~~~----------~~~~~~~~nl~~~l~G~ 1122 (1128)
|||+++.+.+..+ .+....++++..|+.++
T Consensus 286 ~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~ 325 (404)
T 1gpj_A 286 IDDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKL 325 (404)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999987765 67777888888887654
No 89
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.51 E-value=5e-14 Score=163.61 Aligned_cols=199 Identities=14% Similarity=0.191 Sum_probs=135.8
Q ss_pred HHhhccceeEEeecCC----ChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHH
Q psy13054 849 KLLKAFKVSKILYTSR----NKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVS 924 (1128)
Q Consensus 849 ~~l~~~~~~~~~~~~i----~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~ 924 (1128)
+.+++++++.....++ +++.++.+.+++++|+....+.|+.+++++.++||.+++.... ++.+++..+. +|+..
T Consensus 63 ~~~~~adiil~v~~p~~~~~~~~~i~~l~~~~~~i~~~~~~~~~~~~~~~~~~gi~~~~~e~~-~~~~~~~~l~-~l~~~ 140 (384)
T 1l7d_A 63 QALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELM-PRISRAQSMD-ILSSQ 140 (384)
T ss_dssp HHHSSCSEEEEEECCCCGGGSCCGGGGSCTTCEEEEECCGGGCHHHHHHHHHTTCEEEEGGGC-CCSGGGGGGC-HHHHH
T ss_pred hhhcCCCEEEEecCcccccCCHHHHHhhccCCEEEEEecccCCHHHHHHHHHCCCEEEEeccc-cccccccccc-hhhHH
Confidence 4556677666556666 7888988745799999999999999999999999999984211 1111112222 22222
Q ss_pred hccHHHHHHHHcCCCcccc-ccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc
Q psy13054 925 RRFQEGRKCITSGEWALKQ-THIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV 1002 (1128)
Q Consensus 925 R~i~~~~~~~~~g~w~~~~-~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~ 1002 (1128)
+.+ .....+..+.|.... +...-....++.|++|+|+|+|.||+.+++.++++|++|+++|++..+.+ ..+.|.+.+
T Consensus 141 a~~-ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 141 SNL-AGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFI 219 (384)
T ss_dssp HHH-HHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEEC
T ss_pred HHH-HHHHHHHHHHHHhhhcccchhccCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEE
Confidence 222 122222222221000 00000011368999999999999999999999999999999998776544 444565433
Q ss_pred ---C---------------------------hHhhhccCCEEEEec--CCCcccccccCHHHHccCCCCcEEEEcC--CC
Q psy13054 1003 ---P---------------------------LDTLCAESDFIFVTC--ALTKDTEQLIGRKQFSLMKPTAILVNTS--RG 1048 (1128)
Q Consensus 1003 ---~---------------------------l~ell~~sDvV~l~l--Plt~~T~~li~~~~l~~mk~ga~lIN~a--RG 1048 (1128)
. ++++++++|+|+.++ |.. .+.++++++.++.||+|+++||++ ||
T Consensus 220 ~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~g 298 (384)
T 1l7d_A 220 TVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAG 298 (384)
T ss_dssp CC-----------------------CCHHHHHHHHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGT
T ss_pred eecccccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCC
Confidence 1 778889999999777 443 356789999999999999999999 77
Q ss_pred ccc
Q psy13054 1049 GLL 1051 (1128)
Q Consensus 1049 ~lV 1051 (1128)
+.+
T Consensus 299 g~~ 301 (384)
T 1l7d_A 299 GNC 301 (384)
T ss_dssp CSS
T ss_pred CCe
Confidence 654
No 90
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.47 E-value=8.8e-14 Score=161.28 Aligned_cols=143 Identities=17% Similarity=0.215 Sum_probs=106.5
Q ss_pred hhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHH
Q psy13054 892 HEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLET 971 (1128)
Q Consensus 892 ~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~v 971 (1128)
....+..|+|.|+...-+.+.-+...+ ....+..... +. ....+.||+++|+|+|.||+.+
T Consensus 175 ~~~g~L~~Pvi~vnds~tK~~fDn~yG----t~~s~~~gi~--ra-------------t~~~L~GktV~ViG~G~IGk~v 235 (435)
T 3gvp_A 175 SKAGKLCVPAMNVNDSVTKQKFDNLYC----CRESILDGLK--RT-------------TDMMFGGKQVVVCGYGEVGKGC 235 (435)
T ss_dssp --CCCCCSCEEECTTCHHHHHHHTHHH----HHHHHHHHHH--HH-------------HCCCCTTCEEEEECCSHHHHHH
T ss_pred HHcCCCCCCEEEecchhhhhhhhhhhh----hHHHHHHHHH--Hh-------------hCceecCCEEEEEeeCHHHHHH
Confidence 344467899999987555443332222 1111111111 10 1125899999999999999999
Q ss_pred HHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcc
Q psy13054 972 AKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 972 A~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~l 1050 (1128)
|++|++|||+|+++|..+.+.. +...|++..++++++++||+|++| +.|+++|+++.|+.||+|+++||+|||.+
T Consensus 236 A~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 236 CAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp HHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred HHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence 9999999999999986654333 445677778999999999999994 56889999999999999999999999998
Q ss_pred -cCHHHHH
Q psy13054 1051 -LDQEALV 1057 (1128)
Q Consensus 1051 -Vde~aL~ 1057 (1128)
+|.++|.
T Consensus 312 EId~~~L~ 319 (435)
T 3gvp_A 312 EIDVASLR 319 (435)
T ss_dssp TBTGGGGC
T ss_pred cCCHHHHH
Confidence 7877774
No 91
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.30 E-value=6.5e-12 Score=146.56 Aligned_cols=250 Identities=11% Similarity=0.125 Sum_probs=144.5
Q ss_pred ccchhhhhhhhccCCceEEEcCCC--CCCCCHHHHHHh---------cCCceEEEeCCCCCCCHHHHhccCCCceEEEEc
Q psy13054 42 LLVPESLSKLRFNSRFDIDTYPVS--EGRMPRDIFIEK---------LKGCSALLCNPHQKVDKEVLDRSGENLKVIATF 110 (1128)
Q Consensus 42 ~l~~~~l~~l~~~~~~~v~~~~~~--~~~~~~eel~~~---------l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~~ 110 (1128)
.+.|+...+|.. ..++|.+.... ....+.++..+. +-++|+|+.. ..+ +++.++.+.+++++|+..
T Consensus 24 ~ltP~~v~~L~~-~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~adiil~v-k~p-~~~~i~~l~~~~~li~~~ 100 (401)
T 1x13_A 24 AATPKTVEQLLK-LGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQSEIILKV-NAP-LDDEIALLNPGTTLVSFI 100 (401)
T ss_dssp SCCHHHHHHHHH-TTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGSSSEEECS-SCC-CHHHHTTCCTTCEEEECC
T ss_pred CCCHHHHHHHHH-CCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHhcCCeEEEe-CCC-CHHHHHHhcCCCcEEEEe
Confidence 578888888742 45777663211 113456666543 4348988753 344 577788766799999999
Q ss_pred CcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHH--HHHHHhhhhhHHHHhhccCCCCcccccccc
Q psy13054 111 SVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQR--HNWIARLSSFAEIQTRALDTKFPAKQQNLH 188 (1128)
Q Consensus 111 gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (1128)
+.|+|++|++++.++||.|. +.++|+|++.++.|.+.+.+... +..++.+..| .+.|......
T Consensus 101 ~~~~d~~~~~al~~~gI~v~-----~~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~--------~~~~~~~~~~-- 165 (401)
T 1x13_A 101 WPAQNPELMQKLAERNVTVM-----AMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHE--------FGRFFTGQIT-- 165 (401)
T ss_dssp CGGGCHHHHHHHHHTTCEEE-----EGGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHH--------CSSCSSCEEE--
T ss_pred cCCCCHHHHHHHHHCCCEEE-----EeehhhhhhhhcccchHHHHHHHHHHHHHHHHHHh--------cccccCCcee--
Confidence 99999999999999999996 45677787777644333333221 2223322111 0111110000
Q ss_pred cceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCceeee
Q psy13054 189 NVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSDIFEF 268 (1128)
Q Consensus 189 ~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~~~~~ 268 (1128)
..| ...+++++|+|.|. +|..+++.+++++..+.
T Consensus 166 ------------~~g-~l~g~~V~ViGaG~---------------------------------iG~~aa~~a~~~Ga~V~ 199 (401)
T 1x13_A 166 ------------AAG-KVPPAKVMVIGAGV---------------------------------AGLAAIGAANSLGAIVR 199 (401)
T ss_dssp ------------TTE-EECCCEEEEECCSH---------------------------------HHHHHHHHHHHTTCEEE
T ss_pred ------------ecc-CcCCCEEEEECCCH---------------------------------HHHHHHHHHHHCCCEEE
Confidence 001 13457888888762 45566666665554322
Q ss_pred eeCCCCCCCCcccc-ccCCccccceeeccccc---cccc--ccccCCc-----ccCHHHHhhcCCEEEEe--cCCCcccc
Q psy13054 269 FLGPKKNGSQNPKW-RMGSKTDTNHYFGYNWF---ERSN--GTALGAQ-----LVPLDTLCAESDFIFVT--CALTKDTE 335 (1128)
Q Consensus 269 ilG~g~iG~~va~~-~~g~~~~~~~~~g~~~~---~~~~--~~~~g~~-----~vsLdeLl~~SDiVslh--~PLT~~T~ 335 (1128)
+++.. ....... .+| +.+...+.. .... .+..... ..+++++++.+|+|+.+ +|. ..+.
T Consensus 200 v~D~~--~~~~~~~~~lG-----a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aDvVI~~~~~pg-~~ap 271 (401)
T 1x13_A 200 AFDTR--PEVKEQVQSMG-----AEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPG-KPAP 271 (401)
T ss_dssp EECSC--GGGHHHHHHTT-----CEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHHCSEEEECCCCTT-SCCC
T ss_pred EEcCC--HHHHHHHHHcC-----CEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCCCCEEEECCccCC-CCCC
Confidence 33321 1110000 011 011000000 0000 0000000 01478899999999998 553 3478
Q ss_pred cccCHHHHhcCCCCcEEEEec--CCCccCH
Q psy13054 336 QLIGRKQFSLMKPTAILINTS--RGGLLDQ 363 (1128)
Q Consensus 336 ~lIn~~~l~~MK~gaiLINta--RG~lVDe 363 (1128)
++|+++.|+.||+|+++||+| ||+.|++
T Consensus 272 ~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 272 KLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp CCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred eeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 999999999999999999999 9999886
No 92
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.27 E-value=1.7e-13 Score=159.99 Aligned_cols=121 Identities=10% Similarity=0.063 Sum_probs=91.4
Q ss_pred eeCCCCCCCCccccccC-Cccccceeeccc-ccccccccccCCcccCHHHHhhcCCE-EEEecCCCcccccccCHHHHhc
Q psy13054 269 FLGPKKNGSQNPKWRMG-SKTDTNHYFGYN-WFERSNGTALGAQLVPLDTLCAESDF-IFVTCALTKDTEQLIGRKQFSL 345 (1128)
Q Consensus 269 ilG~g~iG~~va~~~~g-~~~~~~~~~g~~-~~~~~~~~~~g~~~vsLdeLl~~SDi-Vslh~PLT~~T~~lIn~~~l~~ 345 (1128)
++|+|+||+.++++..+ ++ +++++++ +.. ..++.+.+++++|++.+|. .++ +|+ |+|++ |+.+.|.+
T Consensus 217 I~G~G~VG~~vA~~l~~~~G---~kVv~~sD~~g----~~~~~~gvdl~~L~~~~d~~~~l-~~l-~~t~~-i~~~~l~~ 286 (419)
T 1gtm_A 217 IQGYGNAGYYLAKIMSEDFG---MKVVAVSDSKG----GIYNPDGLNADEVLKWKNEHGSV-KDF-PGATN-ITNEELLE 286 (419)
T ss_dssp EECCSHHHHHHHHHHHHTTC---CEEEEEECSSC----EEEEEEEECHHHHHHHHHHHSSS-TTC-TTSEE-ECHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHhcC---CEEEEEeCCCc----cccCccCCCHHHHHHHHHhcCEe-ecC-ccCee-eCHHHHHh
Confidence 55666666666654333 32 2344442 211 1122345689999887765 444 788 78999 89999999
Q ss_pred CCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCC-CCcccCCCCCCCCcccccccC
Q psy13054 346 MKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPAD-HPLVQLDNCGGAGLDVMIPEP 412 (1128)
Q Consensus 346 MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~-~pL~~lpNvg~~~~~v~tph~ 412 (1128)
||+ .+|||+|||.+||+++ +++|++|+|++++ +||++++ +||+.++|| +++||+
T Consensus 287 mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V------~itPhi 341 (419)
T 1gtm_A 287 LEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGI------LQIPDF 341 (419)
T ss_dssp SCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTC------EEECHH
T ss_pred CCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCE------EEECch
Confidence 998 5999999999999999 6999999999998 8998754 799999999 999999
No 93
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.23 E-value=3.5e-11 Score=138.91 Aligned_cols=261 Identities=11% Similarity=0.142 Sum_probs=141.9
Q ss_pred ccchhhhhhhhccCCceEEEcCCC--CCCCCHHHHHH----------hcCCceEEEeCCCCCCCHHHHhccCCCceEEEE
Q psy13054 42 LLVPESLSKLRFNSRFDIDTYPVS--EGRMPRDIFIE----------KLKGCSALLCNPHQKVDKEVLDRSGENLKVIAT 109 (1128)
Q Consensus 42 ~l~~~~l~~l~~~~~~~v~~~~~~--~~~~~~eel~~----------~l~~adaIi~~~~~~i~~evL~~~~~~LK~I~~ 109 (1128)
.+.|+...+|.. ..++|.+-+.. ....+.+++.+ .. ++|+|+. ...++.++ ++.+.++.++|+.
T Consensus 17 ~l~P~~v~~L~~-~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il~-vk~p~~~~-~~~l~~~~~~~~~ 92 (369)
T 2eez_A 17 ALTPGGVESLVR-RGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVVK-VKEPLPEE-YGFLREGLILFTY 92 (369)
T ss_dssp SSCHHHHHHHHH-TTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEEC-SSCCCGGG-GGGCCTTCEEEEC
T ss_pred CcCHHHHHHHHh-CCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEEE-ECCCCHHH-HhhcCCCcEEEEE
Confidence 688999888853 46888663221 02345666664 45 8998874 45666555 6666678999999
Q ss_pred cCcccccccHHHHHhCCcEEE---ecCCC-------CchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCC
Q psy13054 110 FSVGHDHLHLDEIKSRGIRVG---TVGPV-------SSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTK 179 (1128)
Q Consensus 110 ~gvG~DnIDl~aa~erGI~V~---n~pg~-------~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~ 179 (1128)
...++|+.+++++.++||++. +.|.. ++.+.++.-++.++++ +.+..... + ++.
T Consensus 93 ~~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~-~~l~~~~~----g-----------~~~ 156 (369)
T 2eez_A 93 LHLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGA-QFLEKPKG----G-----------RGV 156 (369)
T ss_dssp CCGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHH-HHTSGGGT----S-----------CCC
T ss_pred ecccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHH-HHHHHhcC----C-----------Cce
Confidence 999999999999999999998 44432 3333333322444333 22221100 0 000
Q ss_pred CcccccccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhh
Q psy13054 180 FPAKQQNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNS 259 (1128)
Q Consensus 180 ~~~~~~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~ 259 (1128)
|. .+ . ....+++++|+|.|. +|+.+++.
T Consensus 157 ~~------~~-----------~--~~l~~~~V~ViGaG~---------------------------------iG~~~a~~ 184 (369)
T 2eez_A 157 LL------GG-----------V--PGVAPASVVILGGGT---------------------------------VGTNAAKI 184 (369)
T ss_dssp CT------TC-----------B--TBBCCCEEEEECCSH---------------------------------HHHHHHHH
T ss_pred ec------CC-----------C--CCCCCCEEEEECCCH---------------------------------HHHHHHHH
Confidence 10 00 0 012346777777642 56667777
Q ss_pred ccCCceeeeeeCCCCCCCCccccccCCccccceeecccccccccccccCC-------cccCHHHHhhcCCEEEEecCCCc
Q psy13054 260 LKGSDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERSNGTALGA-------QLVPLDTLCAESDFIFVTCALTK 332 (1128)
Q Consensus 260 l~g~~~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~~~~~~g~-------~~vsLdeLl~~SDiVslh~PLT~ 332 (1128)
+++++..+.+++.. ...... ..+.++. ...+++++++.+|+|+.++|.+.
T Consensus 185 l~~~Ga~V~~~d~~--~~~~~~---------------------~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 185 ALGMGAQVTILDVN--HKRLQY---------------------LDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp HHHTTCEEEEEESC--HHHHHH---------------------HHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred HHhCCCEEEEEECC--HHHHHH---------------------HHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 66655432222210 000000 0001111 12368889999999999999876
Q ss_pred -ccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCCCCcccCCCC---CCCCcccc
Q psy13054 333 -DTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNC---GGAGLDVM 408 (1128)
Q Consensus 333 -~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~~pL~~lpNv---g~~~~~v~ 408 (1128)
.|.++++++.++.||+|+++||+| + ..| |+ +||+ ||.+.++|++..+|+ |...+-..
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~----~---------~~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~ 302 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVA----V---------DQG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGA 302 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGG
T ss_pred cccchhHHHHHHHhhcCCCEEEEEe----c---------CCC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchh
Confidence 789999999999999999999998 1 122 44 9998 777778899998887 22222226
Q ss_pred cccCCCCC
Q psy13054 409 IPEPLPAD 416 (1128)
Q Consensus 409 tph~~~~t 416 (1128)
+||.++..
T Consensus 303 ~p~~as~~ 310 (369)
T 2eez_A 303 VPRTSTFA 310 (369)
T ss_dssp SHHHHHHH
T ss_pred cHHHHHHH
Confidence 67766543
No 94
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.22 E-value=1.3e-11 Score=143.48 Aligned_cols=61 Identities=18% Similarity=0.263 Sum_probs=55.5
Q ss_pred cccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCc-cCHHHHHHH
Q psy13054 305 TALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL-LDQEALVEF 369 (1128)
Q Consensus 305 ~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~l-VDe~AL~~A 369 (1128)
...|+++++++|++++||||++ ++.|+++|+++.|++||+|++|||+|||.+ ||.++|.+.
T Consensus 251 ~~~G~~~~sL~eal~~ADVVil----t~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 251 AMEGYQVLLVEDVVEEAHIFVT----TTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp HHTTCEECCHHHHTTTCSEEEE----CSSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred HHhCCeecCHHHHHhhCCEEEE----CCCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 3457788899999999999996 678999999999999999999999999997 999999764
No 95
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.16 E-value=3.2e-11 Score=140.07 Aligned_cols=59 Identities=22% Similarity=0.260 Sum_probs=53.8
Q ss_pred ccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCc-cCHHHHHH
Q psy13054 306 ALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL-LDQEALVE 368 (1128)
Q Consensus 306 ~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~l-VDe~AL~~ 368 (1128)
..|+++++++|++++||||+++ +.|+|+||++.|++||+|++|||+|||.+ ||+++|.+
T Consensus 288 ~~G~~vv~LeElL~~ADIVv~a----tgt~~lI~~e~l~~MK~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 288 MDGFEVVTLDDAASTADIVVTT----TGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp HTTCEECCHHHHGGGCSEEEEC----CSSSSSBCHHHHHHSCTTEEEEECSSSTTTBTCGGGTT
T ss_pred hcCceeccHHHHHhhCCEEEEC----CCCccccCHHHHhcCCCCeEEEEcCCCCcccCHHHHHh
Confidence 4577888999999999999985 36899999999999999999999999999 99999974
No 96
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.15 E-value=1.7e-10 Score=133.93 Aligned_cols=248 Identities=11% Similarity=0.124 Sum_probs=141.6
Q ss_pred ccchhhhhhhhccCCceEEEcCCCC--CCCCHHHHH-----------HhcCCceEEEeCCCCCC----CHHHHhccCCCc
Q psy13054 42 LLVPESLSKLRFNSRFDIDTYPVSE--GRMPRDIFI-----------EKLKGCSALLCNPHQKV----DKEVLDRSGENL 104 (1128)
Q Consensus 42 ~l~~~~l~~l~~~~~~~v~~~~~~~--~~~~~eel~-----------~~l~~adaIi~~~~~~i----~~evL~~~~~~L 104 (1128)
.|.|+...+|.. ..++|.+-+... ...+.++.. +.++++|+|+.. ..++ +++.++.+++++
T Consensus 17 ~l~P~~v~~L~~-~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v-~~p~~~~~~~~~i~~l~~~~ 94 (384)
T 1l7d_A 17 AISPEVVKKLVG-LGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKV-QRPMTAEEGTDEVALIKEGA 94 (384)
T ss_dssp SCCHHHHHHHHH-TTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEE-ECCCCGGGSCCGGGGSCTTC
T ss_pred CCCHHHHHHHHh-CCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEe-cCcccccCCHHHHHhhccCC
Confidence 688888888853 467776633210 134555655 456889998864 4566 788899886689
Q ss_pred eEEEEcCcccccccHHHHHhCCcEEEecCCCCchhHHHHHHHHHHHHhhchHHHHHHHHhhhhhHHHHhhccCCCCcccc
Q psy13054 105 KVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIARLSSFAEIQTRALDTKFPAKQ 184 (1128)
Q Consensus 105 K~I~~~gvG~DnIDl~aa~erGI~V~n~pg~~~~aVAE~alalmL~l~R~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (1128)
++|+....+.|+.|++++.++||.+++. ...++.+++..+. +|+..+.+. .+..+..+ .|. . ++|..
T Consensus 95 ~~i~~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~a~~a-g~~av~~~-~~~------~-~~~~~-- 161 (384)
T 1l7d_A 95 VLMCHLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQSNLA-GYRAVIDG-AYE------F-ARAFP-- 161 (384)
T ss_dssp EEEEECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHHHHHH-HHHHHHHH-HHH------C-SSCSS--
T ss_pred EEEEEecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHHHHHH-HHHHHHHH-HHH------h-hhccc--
Confidence 9999999999999999999999999984 3333333334444 333333332 11112211 110 0 11110
Q ss_pred cccccceEeecCccccccccccccceeeeeeccccccCCCCCcccccCCccccccccccccccccchhhHhHhhhccCCc
Q psy13054 185 QNLHNVKVRLFPRKNEICQKYSTHKAYLLISLKDQKKNGSQNPKWRMGSKTDTNHYFKAFENSTGAFLSSEINNSLKGSD 264 (1128)
Q Consensus 185 ~~~~~~~v~~~g~~~~~~~~~~~~kt~giiGlg~~~~~g~~~~~w~ig~~t~~~~~~~~fg~~~g~~ig~~va~~l~g~~ 264 (1128)
..+ .+. ....+++++|+|.|. +|..+++.+++++
T Consensus 162 ~~~-------~~~------~~l~g~~V~ViGaG~---------------------------------iG~~aa~~a~~~G 195 (384)
T 1l7d_A 162 MMM-------TAA------GTVPPARVLVFGVGV---------------------------------AGLQAIATAKRLG 195 (384)
T ss_dssp CEE-------ETT------EEECCCEEEEECCSH---------------------------------HHHHHHHHHHHTT
T ss_pred chh-------ccC------CCCCCCEEEEECCCH---------------------------------HHHHHHHHHHHCC
Confidence 000 000 012467888888762 4556666666665
Q ss_pred eeeeeeCCCCCCCCccccccCCccccceeeccccc---ccc---cccccCC-----------cccCHHHHhhcCCEEEEe
Q psy13054 265 IFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWF---ERS---NGTALGA-----------QLVPLDTLCAESDFIFVT 327 (1128)
Q Consensus 265 ~~~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~---~~~---~~~~~g~-----------~~vsLdeLl~~SDiVslh 327 (1128)
+.+.+++.. ....... ..+|.+.. ..+ ....-|+ ....++++++.+|+|+.+
T Consensus 196 a~V~~~d~~--~~~~~~~---------~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi~~ 264 (384)
T 1l7d_A 196 AVVMATDVR--AATKEQV---------ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITT 264 (384)
T ss_dssp CEEEEECSC--STTHHHH---------HHTTCEECCC-----------------------CCHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEEeCC--HHHHHHH---------HHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEEEC
Confidence 433333321 1110000 00111110 000 0000000 011288899999999955
Q ss_pred cCCCc--ccccccCHHHHhcCCCCcEEEEec--CCCccC
Q psy13054 328 CALTK--DTEQLIGRKQFSLMKPTAILINTS--RGGLLD 362 (1128)
Q Consensus 328 ~PLT~--~T~~lIn~~~l~~MK~gaiLINta--RG~lVD 362 (1128)
+ +.| .+.++|+++.++.||||+++||+| ||+.++
T Consensus 265 ~-~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~ 302 (384)
T 1l7d_A 265 A-LIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCP 302 (384)
T ss_dssp C-CCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSST
T ss_pred C-ccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCee
Confidence 5 444 357899999999999999999999 988664
No 97
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.06 E-value=2.7e-10 Score=130.22 Aligned_cols=109 Identities=20% Similarity=0.251 Sum_probs=93.7
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhc-cCCEEEEecCCCcccccccCH
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCA-ESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~-~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
++.||||+|+|+|+||+.+|++|++|||+|+++|.+..+.+ ....++++++.++++. +|||++. ..|.++|+.
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP-----~A~~~~I~~ 246 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAP-----CAMGGVITT 246 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEE-----CSCSCCBCH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecH-----hHHHhhcCH
Confidence 58999999999999999999999999999998886644322 3456777888999988 9999984 368899999
Q ss_pred HHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1031 KQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1031 ~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
+.++.|| ..++||.+|+.+.+++| .++|+++.+..+
T Consensus 247 ~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIlv~ 282 (355)
T 1c1d_A 247 EVARTLD-CSVVAGAANNVIADEAA-SDILHARGILYA 282 (355)
T ss_dssp HHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCEEC
T ss_pred HHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEEEE
Confidence 9999998 78999999999999888 699999887554
No 98
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=98.98 E-value=1.8e-09 Score=119.38 Aligned_cols=145 Identities=18% Similarity=0.159 Sum_probs=106.5
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh-hhhcCCc---ccChHhhhc-cCCEEEEecCCCcccccccC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE-GTALGAQ---LVPLDTLCA-ESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~-~~~~g~~---~~~l~ell~-~sDvV~l~lPlt~~T~~li~ 1029 (1128)
++|||||+|.||+.+|+.|...|+ +|++||++..+.+ ..+.|+. ..+++++++ ++|+|++++|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 579999999999999999999998 9999987655443 4445653 237889999 999999999954 5666664
Q ss_pred HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCC---CCCCCCccccCCCeEECCCCCCCcHHHHHH
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPE---PLPADHPLVQLDNCVLTPHTSSATKAVRDE 1106 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~E---Pl~~~~pL~~~pNvilTPHiag~t~e~~~~ 1106 (1128)
+....+++++++++++++.....+.+.+.+.++-+.+ .-++..| |..+.++++.-++++++||.++. .+..+.
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~-~~~~~~ 156 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KKRLKL 156 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC-HHHHHH
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEecCCCCC-HHHHHH
Confidence 4566789999999999988766788888887642211 2234333 33445577888889999997654 344433
No 99
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=98.96 E-value=6.6e-10 Score=125.73 Aligned_cols=116 Identities=14% Similarity=0.150 Sum_probs=97.4
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCH
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
....++|||||+|.||+.+|+.|...|++|++||++..+.+ ..+.|+... ++++++++||+|++++|..+.++.++..
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence 34567999999999999999999999999999987765544 444566654 8999999999999999987788877753
Q ss_pred -HHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1031 -KQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1031 -~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
+.++.++++.++||++++.+.+.+.+.+.+++..+...
T Consensus 108 ~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~ 146 (320)
T 4dll_A 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHL 146 (320)
T ss_dssp TCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEE
Confidence 57778999999999999999999999999988766543
No 100
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=98.94 E-value=6.2e-10 Score=125.02 Aligned_cols=114 Identities=14% Similarity=0.177 Sum_probs=98.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccccccC--HHH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIG--RKQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~--~~~ 1032 (1128)
|+||+||+|.||.++|++|..-|.+|.+||++..+.+ ..+.|.+.. ++.|+++.||+|++|+|..+..+.++. ...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 5899999999999999999999999999997766655 556677765 899999999999999999999888773 347
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEec
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDV 1072 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV 1072 (1128)
++.+++|.++|+++....-+...+.+.+++..+.. +|.
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~--lDa 121 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLAM--LDA 121 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEE--EEC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEE--Eec
Confidence 88999999999999999999999999999887654 563
No 101
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=98.94 E-value=9.9e-10 Score=123.19 Aligned_cols=112 Identities=19% Similarity=0.188 Sum_probs=95.1
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCHHHHc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFS 1034 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~ 1034 (1128)
++||+||+|.||.++|++|...|.+|++||++..+.+ ..+.|...+ ++.|++++||+|++|+|..+..+.++....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 5799999999999999999999999999998777655 556677665 89999999999999999888888888888999
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1035 LMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1035 ~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
.++++.++|+++....-+.+.+.+.+++..+...
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~l 119 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYV 119 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCcee
Confidence 9999999999999999999999999998877553
No 102
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=98.92 E-value=4.9e-09 Score=118.47 Aligned_cols=151 Identities=17% Similarity=0.126 Sum_probs=107.3
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh-hhhcCCc---ccChHh-hhccCCEEEEecCCCcccc
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE-GTALGAQ---LVPLDT-LCAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~-~~~~g~~---~~~l~e-ll~~sDvV~l~lPlt~~T~ 1025 (1128)
++..++|||||+|.||+.+|+.|+..|+ +|++||++....+ +.+.|+. ..++++ ++++||+|++++|.. .+.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHH
Confidence 4556899999999999999999999999 9999987665443 4455652 247888 899999999999955 455
Q ss_pred cccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCC---CCCCCCccccCCCeEECCCCCCCcHH
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPE---PLPADHPLVQLDNCVLTPHTSSATKA 1102 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~E---Pl~~~~pL~~~pNvilTPHiag~t~e 1102 (1128)
.++ ++....+++++++++++.......+++.+.+.. +.-+. -=++-.| |..+...|+.-..+++||+-+ .+.+
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~-hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~-~~~~ 184 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGG-HPIAGTEKSGVEYSLDNLYEGKKVILTPTKK-TDKK 184 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECE-EECCCCCCCSGGGCCTTTTTTCEEEECCCTT-SCHH
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEec-CcccCCcccchhhhhhhhhcCCEEEEEeCCC-CCHH
Confidence 555 466677999999999988776556677777755 22221 1223222 223445677888899999843 4455
Q ss_pred HHHHHH
Q psy13054 1103 VRDEKS 1108 (1128)
Q Consensus 1103 ~~~~~~ 1108 (1128)
..+++.
T Consensus 185 ~~~~v~ 190 (314)
T 3ggo_A 185 RLKLVK 190 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554433
No 103
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=98.92 E-value=9e-10 Score=123.85 Aligned_cols=115 Identities=16% Similarity=0.122 Sum_probs=96.8
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCH
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
++..++|||||+|.||+.+|+.|...|++|++||++..+.+ ..+.|.... ++++++++||+|++++|....++.++++
T Consensus 6 ~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 6 ESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcc
Confidence 34568999999999999999999999999999987665544 444566554 8999999999999999988778888864
Q ss_pred HHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1031 KQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1031 ~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
+.+..+++|.++||+++....+.+.+.+.+++..+..
T Consensus 86 ~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~ 122 (306)
T 3l6d_A 86 PGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHY 122 (306)
T ss_dssp TTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEE
T ss_pred cchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeE
Confidence 4567789999999999999999999999998766544
No 104
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.91 E-value=1.3e-09 Score=126.59 Aligned_cols=58 Identities=21% Similarity=0.369 Sum_probs=52.4
Q ss_pred ccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCc-cCHHHHH
Q psy13054 306 ALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGL-LDQEALV 367 (1128)
Q Consensus 306 ~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~l-VDe~AL~ 367 (1128)
..|++.++++|++++||||+++ +.|+++|+++.|++||+|++|||+|||.. ||.++|.
T Consensus 261 ~~G~~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 261 MDGFRLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp HTTCEECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred HcCCEeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 4567778999999999999993 68999999999999999999999999998 8888874
No 105
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=98.88 E-value=2.3e-09 Score=119.93 Aligned_cols=111 Identities=21% Similarity=0.253 Sum_probs=95.8
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCHHHH
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQF 1033 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l 1033 (1128)
.++|||||+|.||+.+|+.|...|.+|++||++..+.+ ..+.|+... +++++++ ||+|++++|..+.++.++ .+.+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 36899999999999999999999999999998777654 455677654 8999999 999999999887888887 6788
Q ss_pred ccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1034 SLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1034 ~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
..++++.++||+++....+.+.+.+.+++..+...
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~ 127 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDIHIV 127 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEE
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEE
Confidence 88999999999999999999999999987655443
No 106
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.86 E-value=3.1e-08 Score=114.87 Aligned_cols=100 Identities=22% Similarity=0.358 Sum_probs=82.4
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc------------------------------
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL------------------------------ 1001 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~------------------------------ 1001 (1128)
.+.+.+|+|+|+|.||..+|+.++++|++|++||.+..+.+ ..+.|.++
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 67899999999999999999999999999999998877644 44445432
Q ss_pred cChHhhhccCCEEEEec--CCCcccccccCHHHHccCCCCcEEEEcC--CCcccCH
Q psy13054 1002 VPLDTLCAESDFIFVTC--ALTKDTEQLIGRKQFSLMKPTAILVNTS--RGGLLDQ 1053 (1128)
Q Consensus 1002 ~~l~ell~~sDvV~l~l--Plt~~T~~li~~~~l~~mk~ga~lIN~a--RG~lVde 1053 (1128)
.++++++++||+|+.++ |.. .+.++++++.++.||||+++||+| +|+.+..
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~ 321 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIEG 321 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTT
T ss_pred hHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCccc
Confidence 15788999999999874 543 467899999999999999999998 7776543
No 107
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=98.86 E-value=2.7e-09 Score=120.11 Aligned_cols=115 Identities=12% Similarity=0.057 Sum_probs=96.8
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCccccccc--
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLI-- 1028 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li-- 1028 (1128)
...-++|||||+|.||+.+|+.|...|++|++||++..+.+ ..+.|+... ++++++++||+|++|+|....++.++
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~ 97 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFD 97 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHS
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhC
Confidence 44557899999999999999999999999999997766554 455676654 89999999999999999877887776
Q ss_pred CHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1029 GRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1029 ~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
..+.+..++++.++||+++..+...+.+.+.+++..+..
T Consensus 98 ~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~ 136 (310)
T 3doj_A 98 KGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRF 136 (310)
T ss_dssp TTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred chhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 346678899999999999999999999999988765543
No 108
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.84 E-value=5e-09 Score=120.53 Aligned_cols=175 Identities=16% Similarity=0.185 Sum_probs=112.4
Q ss_pred CChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCC----h------hHHHHHHHHHHHHHHhccHHHHHH
Q psy13054 864 RNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHIS----S------DTVAEYNIGLAIAVSRRFQEGRKC 933 (1128)
Q Consensus 864 i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~----a------~sVAE~alaliL~~~R~i~~~~~~ 933 (1128)
.+.+.++.+.++-.++.......|.=-++++.++||....--... + .++||.+=.+.. ....+
T Consensus 94 p~~~e~~~l~~g~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av------~~aa~- 166 (381)
T 3p2y_A 94 PTSDEISQLKPGSVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAV------LLGAS- 166 (381)
T ss_dssp CCHHHHTTSCTTCEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHH------HHHHH-
T ss_pred CChhHHhhccCCCEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHH------HHHHH-
Confidence 444555554355555655544444444677888898876632221 1 233443321111 11111
Q ss_pred HHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc----------
Q psy13054 934 ITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV---------- 1002 (1128)
Q Consensus 934 ~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~---------- 1002 (1128)
.-++.. . ..-.....+.+++|+|||+|.||..+|+.++++|++|+++|++..+.+ ..+.|.++.
T Consensus 167 -~l~~~~---~-~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~ 241 (381)
T 3p2y_A 167 -LSTRFV---P-MLTTAAGTVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEG 241 (381)
T ss_dssp -HCSSCS---S-CEECSSCEECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------
T ss_pred -Hhhhhh---h-hhhcccCCcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccc
Confidence 111110 0 000112267999999999999999999999999999999998876654 444555432
Q ss_pred ----------------ChHhhhccCCEEEEec--CCCcccccccCHHHHccCCCCcEEEEcC--CCccc
Q psy13054 1003 ----------------PLDTLCAESDFIFVTC--ALTKDTEQLIGRKQFSLMKPTAILVNTS--RGGLL 1051 (1128)
Q Consensus 1003 ----------------~l~ell~~sDvV~l~l--Plt~~T~~li~~~~l~~mk~ga~lIN~a--RG~lV 1051 (1128)
+++++++++|+|+.++ |. ..+.++|+++.++.||||+++||+| +|+.+
T Consensus 242 gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 242 GYARELSEAERAQQQQALEDAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp ------CHHHHHHHHHHHHHHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred cchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 4678999999999875 54 3467799999999999999999997 55544
No 109
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=98.84 E-value=3.3e-09 Score=117.87 Aligned_cols=111 Identities=19% Similarity=0.113 Sum_probs=94.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCccccccc--CHHH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLI--GRKQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li--~~~~ 1032 (1128)
++|||||+|.||+.+|+.|...|++|++||++..+.+ ..+.|+... ++++++++||+|++|+|....++.++ +++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 6899999999999999999999999999987766554 445566654 89999999999999999877888777 2467
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
+..++++.++||+++....+.+.+.+.+++..+..
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~ 116 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRF 116 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEE
Confidence 78899999999999999999999999998765544
No 110
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=98.84 E-value=5e-09 Score=120.44 Aligned_cols=120 Identities=12% Similarity=0.255 Sum_probs=100.5
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccC---CEEEEecCCCccccccc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAES---DFIFVTCALTKDTEQLI 1028 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~s---DvV~l~lPlt~~T~~li 1028 (1128)
+.+++|||||+|.||+.+|+.|...|.+|.+||++..+.+ ..+.|+... +++++++.+ |+|++++|.. .++.++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 4678999999999999999999999999999987665544 445566654 899999999 9999999977 888877
Q ss_pred CHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCC
Q psy13054 1029 GRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIP 1075 (1128)
Q Consensus 1029 ~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~ 1075 (1128)
.+.+..++++.++|+++++...+...+.+.+++..+......|+-.
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg 144 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGG 144 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECG
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 5678889999999999999999999999999988877655555543
No 111
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=98.83 E-value=1.9e-09 Score=120.57 Aligned_cols=110 Identities=13% Similarity=0.168 Sum_probs=92.6
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCH--HH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGR--KQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~--~~ 1032 (1128)
++|||||+|.||+.+|+.|...|++|++||++..+.+ ..+.|+... ++++++++||+|++|+|....++.++.. +.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999987665544 445576654 8999999999999999988777777642 56
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcCCce
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIG 1066 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ 1066 (1128)
+..++++.++||++.+.....+.+.+.+++..+.
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~ 117 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGLA 117 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCC
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 7789999999999999999989999999875443
No 112
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=98.82 E-value=8.2e-09 Score=116.70 Aligned_cols=118 Identities=14% Similarity=0.034 Sum_probs=93.8
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCC-CEEEEEeCCCC-------chh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFK-VSKILYTSRRV-------KEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG-~~Vi~~d~~~~-------~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~ 1025 (1128)
.++|||||+|.||..+|+.|...| .+|++||++.. ..+ ..+.|+ .. ++++++++||+|++++|......
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~~e~~~~aDvVi~avp~~~~~~ 102 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDDVAGIACADVVLSLVVGAATKA 102 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESSGGGGGGCSEEEECCCGGGHHH
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCHHHHHhcCCEEEEecCCHHHHH
Confidence 368999999999999999999999 99999987652 111 234466 56 89999999999999999776665
Q ss_pred cccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPE 1076 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~E 1076 (1128)
.+ .+....++++.++||+++......+.+.+.+++..+....--|+-++
T Consensus 103 ~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~ 151 (317)
T 4ezb_A 103 VA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARV 151 (317)
T ss_dssp HH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCS
T ss_pred HH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCc
Confidence 44 67788899999999999999999999999998765544322345433
No 113
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=98.81 E-value=3.1e-09 Score=118.04 Aligned_cols=111 Identities=17% Similarity=0.120 Sum_probs=93.8
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCccccccc--CHHH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLI--GRKQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li--~~~~ 1032 (1128)
++|||||+|.||+.+|+.|...|.+|.+||++..+.+ ..+.|+... ++++++++||+|++++|..+.++.++ ..+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 4799999999999999999999999999997766554 445566654 89999999999999999877887776 2456
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
+..++++.++||++++...+.+.+.+.+++..+..
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~ 116 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRF 116 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 78899999999999999999999999988765543
No 114
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=98.81 E-value=8.9e-09 Score=121.58 Aligned_cols=93 Identities=23% Similarity=0.296 Sum_probs=80.4
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
.+.||+++|+|+|.||+.+|++|+++|++|+++|+...+.. +...++...+++++++.+|+|+.+ ..+.++++.+
T Consensus 262 ~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~a----tG~~~vl~~e 337 (488)
T 3ond_A 262 MIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTT----TGNKDIIMLD 337 (488)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEEC----SSCSCSBCHH
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeC----CCChhhhhHH
Confidence 48999999999999999999999999999999987654433 445677777899999999999964 3467899999
Q ss_pred HHccCCCCcEEEEcCCCc
Q psy13054 1032 QFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~ 1049 (1128)
.|+.||++++++|+||+.
T Consensus 338 ~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 338 HMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp HHTTSCTTEEEEESSSTT
T ss_pred HHHhcCCCeEEEEcCCCC
Confidence 999999999999999983
No 115
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=98.80 E-value=1.7e-08 Score=112.07 Aligned_cols=139 Identities=14% Similarity=0.070 Sum_probs=102.0
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhc-----------C--------------Cc-ccChHhhhc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTAL-----------G--------------AQ-LVPLDTLCA 1009 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~-----------g--------------~~-~~~l~ell~ 1009 (1128)
++|||||+|.||..+|+.+...|++|++||++....+ ..+. + +. ..+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 6899999999999999999999999999987655433 2111 1 12 247888999
Q ss_pred cCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCC
Q psy13054 1010 ESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDN 1089 (1128)
Q Consensus 1010 ~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pN 1089 (1128)
+||+|+.++|.+.+.+.-+-++..+.+++++++++.+.+ +...++.+++... -...++..+. |.+..+.
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~--------p~~~~~l 153 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN--------HVWVNNT 153 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS--------STTTSCE
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC--------CcccCce
Confidence 999999999988777776666788889999999955444 3567888887543 3455566552 4567788
Q ss_pred eEECCCCCCCcHHHHHHH
Q psy13054 1090 CVLTPHTSSATKAVRDEK 1107 (1128)
Q Consensus 1090 vilTPHiag~t~e~~~~~ 1107 (1128)
+.++||- ..+.+..+..
T Consensus 154 vevv~~~-~t~~~~~~~~ 170 (283)
T 4e12_A 154 AEVMGTT-KTDPEVYQQV 170 (283)
T ss_dssp EEEEECT-TSCHHHHHHH
T ss_pred EEEEeCC-CCCHHHHHHH
Confidence 8999983 3344544433
No 116
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.79 E-value=1.5e-08 Score=111.34 Aligned_cols=160 Identities=14% Similarity=0.158 Sum_probs=115.8
Q ss_pred ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCc
Q psy13054 861 YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWA 940 (1128)
Q Consensus 861 ~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~ 940 (1128)
+.++.++++..+ ++|+-++....|+|.++. +.| +..|+|++. .+++.++.|. +
T Consensus 60 t~P~k~~i~~~~-~~l~~~a~~~gavn~i~~----~~g----~~~g~ntd~-----~g~~~~l~~~----------~--- 112 (263)
T 2d5c_A 60 TLPLKEAALAHL-DWVSPEAQRIGAVNTVLQ----VEG----RLFGFNTDA-----PGFLEALKAG----------G--- 112 (263)
T ss_dssp CTTCTTGGGGGC-SEECHHHHHHTCCCEEEE----ETT----EEEEECCHH-----HHHHHHHHHT----------T---
T ss_pred cccCHHHHHHHH-HHHhHHHHHhCCCCcEEc----cCC----eEEEeCCCH-----HHHHHHHHHh----------C---
Confidence 457888888886 888888899999999876 344 223556544 2444444321 1
Q ss_pred cccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--hhhcCCcccChHhhhccCCEEEEec
Q psy13054 941 LKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--GTALGAQLVPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 941 ~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g~~~~~l~ell~~sDvV~l~l 1018 (1128)
.++.| +++|||+|.+|+.+++.|...|++|.++|++..+.. ....+....+++++ +++|+|++++
T Consensus 113 -----------~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~t 179 (263)
T 2d5c_A 113 -----------IPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNAT 179 (263)
T ss_dssp -----------CCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECS
T ss_pred -----------CCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEcc
Confidence 13788 999999999999999999999999999987654433 23345444578888 9999999999
Q ss_pred CCC--cccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCc
Q psy13054 1019 ALT--KDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKI 1065 (1128)
Q Consensus 1019 Plt--~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i 1065 (1128)
|.. +++...++ .+.+++|+++++++.+. .++ .|.+++++..+
T Consensus 180 p~~~~~~~~~~l~---~~~l~~g~~viD~~~~p-~~t-~l~~~a~~~g~ 223 (263)
T 2d5c_A 180 RVGLEDPSASPLP---AELFPEEGAAVDLVYRP-LWT-RFLREAKAKGL 223 (263)
T ss_dssp STTTTCTTCCSSC---GGGSCSSSEEEESCCSS-SSC-HHHHHHHHTTC
T ss_pred CCCCCCCCCCCCC---HHHcCCCCEEEEeecCC-ccc-HHHHHHHHCcC
Confidence 977 33434554 56789999999999874 344 47777766443
No 117
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.78 E-value=1.2e-08 Score=115.09 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=88.2
Q ss_pred HHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCC--Cchh-hhhcCCccc-ChH
Q psy13054 931 RKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRR--VKEE-GTALGAQLV-PLD 1005 (1128)
Q Consensus 931 ~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~--~~~~-~~~~g~~~~-~l~ 1005 (1128)
++.++.+.|.+.+. .+..+....++|||||+|.||..+|+.|...|. +|++||++. ...+ ..+.|+... ++.
T Consensus 2 ~~~~~~~~~~~~~~---~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~ 78 (312)
T 3qsg_A 2 HHHHHHSSGVDLGT---ENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVA 78 (312)
T ss_dssp --------------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHH
T ss_pred CcccccccccccCc---ccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHH
Confidence 34456666753211 112224456799999999999999999999999 999998753 2222 445676654 899
Q ss_pred hhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1006 TLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1006 ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
+++++||+|++++|...... .+ .+....++++.++||++........++.+.+.+.
T Consensus 79 e~~~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 79 EVAGECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp HHHHHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 99999999999999776554 33 5677889999999999999999999999998875
No 118
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=98.77 E-value=4.6e-09 Score=117.77 Aligned_cols=112 Identities=20% Similarity=0.152 Sum_probs=93.4
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc--cChHhhhccCCEEEEecCCCcccccccC--H
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL--VPLDTLCAESDFIFVTCALTKDTEQLIG--R 1030 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~--~~l~ell~~sDvV~l~lPlt~~T~~li~--~ 1030 (1128)
.++|||||+|.||..+|+.|...|.+|++||++..+.+ ..+.|... .++++++++||+|++++|..+.++.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 46899999999999999999999999999987665544 44456654 4899999999999999998777777762 4
Q ss_pred HHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1031 KQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1031 ~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
+.+..++++.++||+++......+.+.+.+++..+..
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~ 123 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNM 123 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeE
Confidence 5677899999999999999999999999998765543
No 119
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=98.75 E-value=1.5e-09 Score=123.81 Aligned_cols=136 Identities=19% Similarity=0.159 Sum_probs=97.8
Q ss_pred cccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCch-h-hhhcCCcccChHhhhccCCEEEEecCCCcccccccC
Q psy13054 952 MGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKE-E-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 952 ~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~-~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
..+.+++|||||+|.||+.+|+.|+..|++|++++++..+. . +.+.|+...++++++++||+|++++|... ...++.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~-~~~v~~ 90 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEF-QGRLYK 90 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHH-HHHHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHH-HHHHHH
Confidence 36889999999999999999999999999999998776542 2 44567765689999999999999999554 366665
Q ss_pred HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCc---ccc---CCCeEECCCCC
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHP---LVQ---LDNCVLTPHTS 1097 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~p---L~~---~pNvilTPHia 1097 (1128)
++....|++++++|.++ | +.. ....+. ...++||+...|..+.++ ++. -.++++|||..
T Consensus 91 ~~i~~~l~~~~ivi~~~-g--v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~ 155 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH-G--FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQD 155 (338)
T ss_dssp HHTGGGCCTTCEEEESC-C--HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEEC
T ss_pred HHHHhhCCCCCEEEEcC-C--chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCC
Confidence 45667899999999874 2 222 122111 122356666667544443 333 56788999964
No 120
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=98.74 E-value=1.5e-08 Score=112.55 Aligned_cols=140 Identities=20% Similarity=0.217 Sum_probs=100.5
Q ss_pred CCeEEEEEcChhhHHHHHHHhhC--CCEEEEEeCCCCchh-hhhcCCc---ccChHhhhccCCEEEEecCCCcccccccC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAF--KVSKILYTSRRVKEE-GTALGAQ---LVPLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~af--G~~Vi~~d~~~~~~~-~~~~g~~---~~~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
-++|||||+|.||+.+|+.|... |.+|++||++..+.. ..+.|.. ..+++++++++|+|++++|... .+.++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~~ 84 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFIK 84 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHHH
Confidence 36899999999999999999866 789999987654433 3345552 2478889999999999999543 355663
Q ss_pred HHHHcc-CCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEe---ccCC---CCCCCCCccccCCCeEECCCCCCC
Q psy13054 1030 RKQFSL-MKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLD---VMIP---EPLPADHPLVQLDNCVLTPHTSSA 1099 (1128)
Q Consensus 1030 ~~~l~~-mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLD---V~e~---EPl~~~~pL~~~pNvilTPHiag~ 1099 (1128)
+.... +++++++|++++......+.+.+.+.+..+.. ++ ++-. .|......++.-++++++||.++.
T Consensus 85 -~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~--v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~ 158 (290)
T 3b1f_A 85 -ILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQF--VGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTK 158 (290)
T ss_dssp -HHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEE--EEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCC
T ss_pred -HHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEE--EEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCC
Confidence 35566 89999999999988766788888887522222 23 2211 344445577787889999997654
No 121
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=98.65 E-value=3e-08 Score=111.04 Aligned_cols=137 Identities=16% Similarity=0.128 Sum_probs=90.6
Q ss_pred HHHHHHHcCCCccccccccCCcccccCCCeEEEEE-cChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhh
Q psy13054 929 EGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVG-LGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTL 1007 (1128)
Q Consensus 929 ~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG-~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~el 1007 (1128)
++..++++..|.. ..+ ..++||||| +|.||..+|+.|+..|++|.+||+... .+.+++
T Consensus 4 ~~~~~~~~~~~~~-----~~~-----~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-----------~~~~~~ 62 (298)
T 2pv7_A 4 ESYANENQFGFKT-----INS-----DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-----------AVAESI 62 (298)
T ss_dssp ---------CCCC-----SCT-----TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-----------GGHHHH
T ss_pred hHHhhhhccCccc-----cCC-----CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-----------cCHHHH
Confidence 4445566777861 111 346899999 999999999999999999999985432 156788
Q ss_pred hccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCC-CCCCcccc
Q psy13054 1008 CAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPL-PADHPLVQ 1086 (1128)
Q Consensus 1008 l~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl-~~~~pL~~ 1086 (1128)
+++||+|++++|.. .+..++. +....++++++++++++......+++.+.+. . ++....|+ .+..+++.
T Consensus 63 ~~~aDvVilavp~~-~~~~vl~-~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~---~-----~~v~~hP~~g~~~~~~~ 132 (298)
T 2pv7_A 63 LANADVVIVSVPIN-LTLETIE-RLKPYLTENMLLADLTSVKREPLAKMLEVHT---G-----AVLGLHPMFGADIASMA 132 (298)
T ss_dssp HTTCSEEEECSCGG-GHHHHHH-HHGGGCCTTSEEEECCSCCHHHHHHHHHHCS---S-----EEEEEEECSCTTCSCCT
T ss_pred hcCCCEEEEeCCHH-HHHHHHH-HHHhhcCCCcEEEECCCCCcHHHHHHHHhcC---C-----CEEeeCCCCCCCchhhc
Confidence 99999999999955 4777774 4556789999999998876544455544431 1 22222342 12235666
Q ss_pred CCCeEECCCC
Q psy13054 1087 LDNCVLTPHT 1096 (1128)
Q Consensus 1087 ~pNvilTPHi 1096 (1128)
-.++++|||-
T Consensus 133 g~~~~l~~~~ 142 (298)
T 2pv7_A 133 KQVVVRCDGR 142 (298)
T ss_dssp TCEEEEEEEE
T ss_pred CCeEEEecCC
Confidence 6689999975
No 122
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=98.61 E-value=2.1e-08 Score=114.40 Aligned_cols=138 Identities=16% Similarity=0.095 Sum_probs=94.5
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc-cChHhhhcc----CCEEEEecCCCcccccccC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL-VPLDTLCAE----SDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~-~~l~ell~~----sDvV~l~lPlt~~T~~li~ 1029 (1128)
-++|||||+|.||..+|+.|+..|++|++||++..... +.+.|+.. .++++++++ +|+|++|+|. ..+..++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHHH
Confidence 35799999999999999999999999999997655443 55667654 478888765 7999999994 56777773
Q ss_pred HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEE-EeccCCC---CCCCCCccccCCCeEECCCCCC
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAG-LDVMIPE---PLPADHPLVQLDNCVLTPHTSS 1098 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaa-LDV~e~E---Pl~~~~pL~~~pNvilTPHiag 1098 (1128)
.+..+++++++++++..+.--.+++.+.+.. ....+ -=++-+| |...+..|+.-.++++||+-..
T Consensus 87 --~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~~--~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~ 155 (341)
T 3ktd_A 87 --AVHTHAPNNGFTDVVSVKTAVYDAVKARNMQ--HRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLF 155 (341)
T ss_dssp --HHHHHCTTCCEEECCSCSHHHHHHHHHTTCG--GGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGT
T ss_pred --HHHccCCCCEEEEcCCCChHHHHHHHHhCCC--CcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCC
Confidence 3455699999999987664333444443321 11111 1122222 2223456777778999998543
No 123
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=98.59 E-value=9.7e-08 Score=113.65 Aligned_cols=119 Identities=17% Similarity=0.178 Sum_probs=97.6
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhc---CCc---ccChHhhhc---cCCEEEEecCCCcccc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTAL---GAQ---LVPLDTLCA---ESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~---g~~---~~~l~ell~---~sDvV~l~lPlt~~T~ 1025 (1128)
.++|||||+|.||..+|+.|...|.+|++||++..+.+ ..+. +.. ..+++|+++ .+|+|++++|..+.++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 46899999999999999999999999999998776554 2222 222 247888887 5999999999888888
Q ss_pred cccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIP 1075 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~ 1075 (1128)
.++ .+.+..|++|.++|+++++...+...+.+.|++..+.....-|.-.
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg 132 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGG 132 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESH
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCC
Confidence 888 5788899999999999999999999999999888776655555443
No 124
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.58 E-value=6.5e-08 Score=111.16 Aligned_cols=106 Identities=17% Similarity=0.264 Sum_probs=86.8
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--hhhcCCcccChHhhhc-cCCEEEEecCCCcccccccC
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--GTALGAQLVPLDTLCA-ESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g~~~~~l~ell~-~sDvV~l~lPlt~~T~~li~ 1029 (1128)
++.||+|+|+|+|+||+.+|+.|..+|++|+++|+...+.. ..+.+.+.++.++++. +|||++.|. +.++|+
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-----~~~~I~ 244 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-----LGAVLN 244 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-----CSCCBS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-----hHHHhC
Confidence 48999999999999999999999999999998886554333 3344777778888877 899999763 677899
Q ss_pred HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCc
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKI 1065 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i 1065 (1128)
.+.++.|+ ..+++|.+++.+.+++ ..+.|+++.+
T Consensus 245 ~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 245 DFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp TTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred HHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 88899995 6789999999998866 5567777666
No 125
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.56 E-value=5.3e-08 Score=108.03 Aligned_cols=106 Identities=17% Similarity=0.136 Sum_probs=87.2
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc-cChHhhhccCCEEEEecCCCcccccccCH--HH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIGR--KQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~-~~l~ell~~sDvV~l~lPlt~~T~~li~~--~~ 1032 (1128)
++|||||+|.||+.+|+.|...|++|.+|| +..+.. ..+.|+.. .+++++++++|+|++++|....++.++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 479999999999999999999999999998 655543 33446554 47889999999999999977767776642 45
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
...++++.++|+++.+...+.+.+.+.+.+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5678999999999999888888999998874
No 126
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.56 E-value=6.8e-08 Score=106.72 Aligned_cols=106 Identities=18% Similarity=0.237 Sum_probs=86.3
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHcc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSL 1035 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~ 1035 (1128)
++|||||+|.||+.+|+.|.. |++|.+||++..+.. ..+.|+...+++++++++|+|++++|....++.++ ++....
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVA-EALYPY 79 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHH-HHHTTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHH-HHHHhh
Confidence 479999999999999999999 999999987665543 33335444447788899999999999776677766 455677
Q ss_pred CCCCcEEEEcCCCcccCHHHHHHHHhcCC
Q psy13054 1036 MKPTAILVNTSRGGLLDQEALVEFLKDKK 1064 (1128)
Q Consensus 1036 mk~ga~lIN~aRG~lVde~aL~~aL~~g~ 1064 (1128)
++++.++|+++.+...+.+.+.+.+.+..
T Consensus 80 l~~~~~vv~~s~~~~~~~~~l~~~~~~~g 108 (289)
T 2cvz_A 80 LREGTYWVDATSGEPEASRRLAERLREKG 108 (289)
T ss_dssp CCTTEEEEECSCCCHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHcC
Confidence 89999999999998888889999988753
No 127
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.55 E-value=6.4e-08 Score=107.64 Aligned_cols=109 Identities=20% Similarity=0.234 Sum_probs=89.2
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc-cChHhhhccCCEEEEecCCCcccccccC--HHH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIG--RKQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~-~~l~ell~~sDvV~l~lPlt~~T~~li~--~~~ 1032 (1128)
.+|||||+|.||+.+++.|...|.+|.+||+...+.+ ..+.|+.. .+++++++++|+|++++|....++.++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 4799999999999999999999999999987655443 33446654 3788999999999999998777777762 345
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcCCc
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDKKI 1065 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i 1065 (1128)
...++++.++|+++.|...+.+.|.+.+.+..+
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~ 118 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAKGV 118 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 677899999999999988778899999877543
No 128
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.55 E-value=1.2e-07 Score=105.07 Aligned_cols=157 Identities=11% Similarity=0.141 Sum_probs=109.2
Q ss_pred ecCCChhhhhcCCCCccEEEEccccCCcCChhhhhhCCcEEEEcCCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCc
Q psy13054 861 YTSRNKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWA 940 (1128)
Q Consensus 861 ~~~i~~~~l~~~~~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~ 940 (1128)
+.+..++++..+ +.+.-.+....++|.++. +.|- ..|+|++.. +++.++.+ .+ +
T Consensus 72 tiP~k~~i~~~l-d~l~~~A~~~gavnti~~----~~g~----~~g~nTd~~-----G~~~~l~~----------~~-~- 125 (275)
T 2hk9_A 72 TVPFKEEIIPLL-DYVEDTAKEIGAVNTVKF----ENGK----AYGYNTDWI-----GFLKSLKS----------LI-P- 125 (275)
T ss_dssp CTTSTTTTGGGC-SEECHHHHHHTCCCEEEE----ETTE----EEEECCHHH-----HHHHHHHH----------HC-T-
T ss_pred CccCHHHHHHHH-HHhhHHHHHhCCcceEEe----eCCE----EEeecCCHH-----HHHHHHHH----------hC-C-
Confidence 456777888776 777777777888888764 3442 234555443 44444432 11 1
Q ss_pred cccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--hhhcCCccc-ChHhhhccCCEEEEe
Q psy13054 941 LKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--GTALGAQLV-PLDTLCAESDFIFVT 1017 (1128)
Q Consensus 941 ~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g~~~~-~l~ell~~sDvV~l~ 1017 (1128)
++.|++++|||.|.+|+++++.|...|++|.++|++.++.. ....++... +++++++++|+|+++
T Consensus 126 ------------~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~a 193 (275)
T 2hk9_A 126 ------------EVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNT 193 (275)
T ss_dssp ------------TGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEEC
T ss_pred ------------CcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEe
Confidence 36789999999999999999999999999999987655433 233354444 788999999999999
Q ss_pred cCCCc--ccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhc
Q psy13054 1018 CALTK--DTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD 1062 (1128)
Q Consensus 1018 lPlt~--~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~ 1062 (1128)
+|... ++...++ ++.+++++++++++. .. ..+.+..++
T Consensus 194 tp~~~~~~~~~~i~---~~~l~~g~~viDv~~---~~-t~ll~~a~~ 233 (275)
T 2hk9_A 194 TSVGLKDEDPEIFN---YDLIKKDHVVVDIIY---KE-TKLLKKAKE 233 (275)
T ss_dssp SSTTSSTTCCCSSC---GGGCCTTSEEEESSS---SC-CHHHHHHHH
T ss_pred CCCCCCCCCCCCCC---HHHcCCCCEEEEcCC---Ch-HHHHHHHHH
Confidence 99764 2334554 466899999999988 33 334444444
No 129
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.54 E-value=2.6e-07 Score=101.76 Aligned_cols=143 Identities=20% Similarity=0.132 Sum_probs=97.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCc---ccChHhhhccCCEEEEecCCCcccccccCHHH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQ---LVPLDTLCAESDFIFVTCALTKDTEQLIGRKQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~---~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~ 1032 (1128)
.+|+|||+|.||+.+|+.|...|++|++||++..+.. ..+.|.. ..+++++ +++|+|++++| .+.+..++. +.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~-~~~~~~~~~-~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTP-IQLILPTLE-KL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSC-HHHHHHHHH-HH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECC-HHHHHHHHH-HH
Confidence 3799999999999999999999999999986654433 3344552 2478888 99999999999 445666663 45
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCC---CCCCCCCccccCCCeEECCCCCCCcHHHHHH
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIP---EPLPADHPLVQLDNCVLTPHTSSATKAVRDE 1106 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~---EPl~~~~pL~~~pNvilTPHiag~t~e~~~~ 1106 (1128)
...+++++++|+++.......+.+.+.+. ++-+. .-++-. .|....+.++.-+.++++|+-++ +.+..+.
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~-~~~~~~~ 150 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTEYT-DPEQLAC 150 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECTTC-CHHHHHH
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCCCC-CHHHHHH
Confidence 66789999999998776665666665543 33222 223311 23333345666678899998544 4444433
No 130
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.54 E-value=4.1e-08 Score=115.01 Aligned_cols=95 Identities=23% Similarity=0.285 Sum_probs=78.1
Q ss_pred cccCC-CeEEEEEcChhhHHHHHHHhhC------CCEEEEEeCCCCchh--hhhcCCcc-----cChHhhhccCCEEEEe
Q psy13054 952 MGLKG-ATVGIVGLGNIGLETAKLLKAF------KVSKILYTSRRVKEE--GTALGAQL-----VPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 952 ~~L~g-ktvGIIG~G~IG~~vA~~l~af------G~~Vi~~d~~~~~~~--~~~~g~~~-----~~l~ell~~sDvV~l~ 1017 (1128)
..+.| |+|||||+|.||.++|+.|+.. |++|++.+++..+.. +.+.|+.. .+++|++++||+|+++
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILa 128 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLL 128 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEEC
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEEC
Confidence 37899 9999999999999999999988 999887766544332 55667764 5899999999999999
Q ss_pred cCCCcccccccCHHHHccCCCCcEEEEcCCCc
Q psy13054 1018 CALTKDTEQLIGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1018 lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
+|..... .++. +.+..||+|++ |-.+.|-
T Consensus 129 VP~~~~~-eVl~-eI~p~LK~GaI-Ls~AaGf 157 (525)
T 3fr7_A 129 ISDAAQA-DNYE-KIFSHMKPNSI-LGLSHGF 157 (525)
T ss_dssp SCHHHHH-HHHH-HHHHHSCTTCE-EEESSSH
T ss_pred CChHHHH-HHHH-HHHHhcCCCCe-EEEeCCC
Confidence 9976654 4776 78899999999 5777774
No 131
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.53 E-value=1.1e-07 Score=113.49 Aligned_cols=113 Identities=13% Similarity=0.127 Sum_probs=92.4
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhc----CCcc-cChHhhhcc---CCEEEEecCCCccc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTAL----GAQL-VPLDTLCAE---SDFIFVTCALTKDT 1024 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~----g~~~-~~l~ell~~---sDvV~l~lPlt~~T 1024 (1128)
+..++|||||+|.||+.+|+.|...|.+|.+||++..+.+ ..+. |+.. .+++++++. +|+|++++|..+.+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 5678899999999999999999999999999987665543 2222 5544 378898887 99999999988888
Q ss_pred ccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1025 EQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1025 ~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
+.++ .+....+++|.++|+++.|...+...+.+.+++..+..
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~ 134 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNF 134 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCe
Confidence 8888 46778899999999999999888888999998755543
No 132
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.53 E-value=7.3e-08 Score=107.30 Aligned_cols=107 Identities=21% Similarity=0.234 Sum_probs=88.2
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccccccC--HHH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIG--RKQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~--~~~ 1032 (1128)
++|||||+|.||+.+++.|...|++|.+||++..+.. ..+.|+... +++++++++|+|++++|....++.++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 5799999999999999999999999999987654443 333466543 788999999999999998777877774 356
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
...++++.++|+++.|...+.+.|.+.+.+.
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 6778999999999999877788899888764
No 133
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.52 E-value=6.6e-08 Score=107.37 Aligned_cols=106 Identities=19% Similarity=0.206 Sum_probs=85.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc-cChHhhhccCCEEEEecCCCcccccccCH--HH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIGR--KQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~-~~l~ell~~sDvV~l~lPlt~~T~~li~~--~~ 1032 (1128)
++|||||+|.||+.+|+.|...|++|.+||++..+.+ ..+.|+.. .+++++++++|+|++++|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 3799999999999999999999999999987665544 44456654 37889999999999999988777776643 25
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhc
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKD 1062 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~ 1062 (1128)
+..++++.++|+++...+-+.+.+.+.+.+
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 567899999999888887777777777765
No 134
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=97.89 E-value=1.4e-08 Score=107.42 Aligned_cols=94 Identities=16% Similarity=0.159 Sum_probs=76.6
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHH
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQF 1033 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l 1033 (1128)
+.+++|||||+|.||+.+|+.|...|++|.+|++..........++...+++++++++|+|++++|.. .++.++ .+
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~-~~~~v~---~l 92 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE-HYDFLA---EL 92 (201)
Confidence 67889999999999999999999999999999876542223334555558889999999999999964 677776 25
Q ss_pred ccCCCCcEEEEcCCCccc
Q psy13054 1034 SLMKPTAILVNTSRGGLL 1051 (1128)
Q Consensus 1034 ~~mk~ga~lIN~aRG~lV 1051 (1128)
..+++++++||+++|-..
T Consensus 93 ~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 93 ADSLKGRVLIDVSNNQKM 110 (201)
Confidence 667889999999999864
No 135
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.49 E-value=1.4e-07 Score=105.92 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=88.3
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCH--HH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGR--KQ 1032 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~--~~ 1032 (1128)
++|||||+|.||+.+|+.|...|++|.+||++..+.+ ..+.|+... +++++++++|+|++++|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 6899999999999999999999999999987665544 344565543 7889999999999999977777776643 24
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcCCc
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDKKI 1065 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i 1065 (1128)
+..++++.++|+++.+.....+.+.+.+....+
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~ 143 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVSRGG 143 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 577899999999999887778888888865443
No 136
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.46 E-value=9.4e-09 Score=120.07 Aligned_cols=150 Identities=15% Similarity=0.163 Sum_probs=107.9
Q ss_pred CCCeEEEEEcccccCccchHHHH-----HcCCeEEecCCCchHhHHHHHHHHHHHHHHhhhhhhhhhhcCccccc-cccc
Q psy13054 618 IKNLKVITTFSVGYDHLELHEIK-----ARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALK-QTHI 691 (1128)
Q Consensus 618 ~p~Lk~I~~~g~G~D~iD~~~a~-----~~gI~v~n~pg~~~~aVAE~ai~llLa~~R~i~~~~~~~r~G~W~~~-~~~~ 691 (1128)
.+.++.|...|+|+|++|+..+. ++++.++|.+|+ ..+++++.+..++.+.|++....... .+.|... ....
T Consensus 79 ~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~ 156 (404)
T 1gpj_A 79 SEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVE 156 (404)
T ss_dssp HHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHH
T ss_pred chHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHH
Confidence 46899999999999999999998 899999999998 57899999999999999987765443 4555321 0000
Q ss_pred cCC-ccCCCCCCEEEEEecChhhHHHHHHHhhCCC-eEEEEcCCCcccc------Cc---hhhhHHHHHhhc----CCCh
Q psy13054 692 IGP-NIMGLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE------GQ---LFSLVYDFCRYS----IGGV 756 (1128)
Q Consensus 692 ~~~-~~~~l~gktvGIiG~G~IG~~va~r~~afg~-~vi~y~~~~~~~~------~~---~~~~~~~la~~~----pg~~ 756 (1128)
... ...++.|++|+|||+|.||+.+++.++++|+ +|++|++...+.+ +. .+.-+.++...+ -.++
T Consensus 157 ~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~ 236 (404)
T 1gpj_A 157 LAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATA 236 (404)
T ss_dssp HHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCS
T ss_pred HHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccC
Confidence 000 0115789999999999999999999999999 8888887543321 11 111244444444 3344
Q ss_pred hhhhhhhHHHHHH
Q psy13054 757 TIKRLVKKTFILS 769 (1128)
Q Consensus 757 ~t~~l~~~~~l~~ 769 (1128)
.+.++++++.++.
T Consensus 237 ~~~~~~~~~~l~~ 249 (404)
T 1gpj_A 237 APHPVIHVDDVRE 249 (404)
T ss_dssp SSSCCBCHHHHHH
T ss_pred CCCceecHHHHHH
Confidence 5566777777766
No 137
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.43 E-value=3.4e-07 Score=109.58 Aligned_cols=111 Identities=16% Similarity=0.182 Sum_probs=92.0
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh-----cCCcc-cChHhhhcc---CCEEEEecCCCcccc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA-----LGAQL-VPLDTLCAE---SDFIFVTCALTKDTE 1025 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~-----~g~~~-~~l~ell~~---sDvV~l~lPlt~~T~ 1025 (1128)
..+|||||+|.||+.+|+.|...|.+|.+||++..+.+ ..+ .|+.. .+++++++. +|+|++++|..+.++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 35799999999999999999999999999997776554 332 35544 378898877 999999999888888
Q ss_pred cccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
.++ .+....+++|.++|+++.+...+...+.+.+++..+..
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~ 130 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILF 130 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCce
Confidence 888 46778899999999999999888889999888754443
No 138
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.41 E-value=1.3e-07 Score=102.76 Aligned_cols=95 Identities=13% Similarity=0.162 Sum_probs=67.2
Q ss_pred cccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCc--------------hh--hhhcC-CcccChHhhhccCC
Q psy13054 950 NIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVK--------------EE--GTALG-AQLVPLDTLCAESD 1012 (1128)
Q Consensus 950 ~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~--------------~~--~~~~g-~~~~~l~ell~~sD 1012 (1128)
...++.+++|||||+|.||+.+|+.|...|.+|++||++..+ .. ....+ ....++.+++++||
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD 92 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAE 92 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCS
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCC
Confidence 344899999999999999999999999999999999876654 11 11223 33457899999999
Q ss_pred EEEEecCCCcccccccCHHH-HccCCCCcEEEEcCC
Q psy13054 1013 FIFVTCALTKDTEQLIGRKQ-FSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1013 vV~l~lPlt~~T~~li~~~~-l~~mk~ga~lIN~aR 1047 (1128)
+|++++|..... ..+. +. ...+ ++.++|+++-
T Consensus 93 vVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s~ 125 (245)
T 3dtt_A 93 LVVNATEGASSI-AALT-AAGAENL-AGKILVDIAN 125 (245)
T ss_dssp EEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECCC
T ss_pred EEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECCC
Confidence 999999965443 3332 12 2233 8999999993
No 139
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.37 E-value=2.6e-07 Score=100.99 Aligned_cols=101 Identities=13% Similarity=0.137 Sum_probs=79.7
Q ss_pred eEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCC--chh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHc
Q psy13054 958 TVGIVGLGNIGLETAKLLKAFKVSKILYTSRRV--KEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFS 1034 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~--~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~ 1034 (1128)
+|||||+|.||+.+|+.|...|.+|++||+... ..+ ..+.|+. .+++++++++|+|++++|.....+.+ .+...
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~~~ 78 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAA--RRAGR 78 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHH--HHHHT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHH--HHHHH
Confidence 799999999999999999999999998865211 111 3334666 78889999999999999976666554 45667
Q ss_pred cCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1035 LMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1035 ~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
.+++ ++|+++.+...+.+.+.+.+.+.
T Consensus 79 ~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 79 HVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp TCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred hcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 7777 99999988877778888888663
No 140
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.36 E-value=4.7e-07 Score=107.63 Aligned_cols=134 Identities=14% Similarity=0.220 Sum_probs=95.3
Q ss_pred CeEEEEEcChhhHHHHHHHhhC--CCEEEEEeCCCCchhh-hh-------------------cCCcc-cChHhhhccCCE
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF--KVSKILYTSRRVKEEG-TA-------------------LGAQL-VPLDTLCAESDF 1013 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af--G~~Vi~~d~~~~~~~~-~~-------------------~g~~~-~~l~ell~~sDv 1013 (1128)
++|||||+|.||..+|..|... |.+|++||.+..+.+. .+ .++.. .++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999887 8999999876544331 10 12333 367888999999
Q ss_pred EEEecCCCccccccc-----------C--HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEe---ccCCCC
Q psy13054 1014 IFVTCALTKDTEQLI-----------G--RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLD---VMIPEP 1077 (1128)
Q Consensus 1014 V~l~lPlt~~T~~li-----------~--~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLD---V~e~EP 1077 (1128)
|++|+|......+.+ + +...+.|++++++|++|...+-..+.+.+.+++.... .+| ++.+|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~--~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKP--NLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCT--TCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCC--CCCeEEEeCHHH
Confidence 999999655444322 1 2345678999999999998888888898888775421 133 366777
Q ss_pred CCCCCc---cccCCCeEE
Q psy13054 1078 LPADHP---LVQLDNCVL 1092 (1128)
Q Consensus 1078 l~~~~p---L~~~pNvil 1092 (1128)
+.+... +...+++++
T Consensus 164 ~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 164 LAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCTTSHHHHHHSCSCEEE
T ss_pred hhcccchhhccCCCEEEE
Confidence 665554 345566654
No 141
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.36 E-value=4.7e-07 Score=107.90 Aligned_cols=115 Identities=19% Similarity=0.216 Sum_probs=91.4
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhc----CCcc-cChHhhhcc---CCEEEEecCCCcccccc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTAL----GAQL-VPLDTLCAE---SDFIFVTCALTKDTEQL 1027 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~----g~~~-~~l~ell~~---sDvV~l~lPlt~~T~~l 1027 (1128)
++|||||+|.||+.+|+.|...|.+|.+||++..+.+ ..+. ++.. .+++++++. +|+|++++|....++.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5799999999999999999999999999987655443 2222 4543 478898876 99999999988788887
Q ss_pred cCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEec
Q psy13054 1028 IGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDV 1072 (1128)
Q Consensus 1028 i~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV 1072 (1128)
+ .+....+++|.++|+++.|...+...+.+.+++..+.....-|
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv 129 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGV 129 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEE
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCC
Confidence 7 4566789999999999999888888899888775554433333
No 142
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.34 E-value=5.6e-07 Score=107.43 Aligned_cols=116 Identities=17% Similarity=0.169 Sum_probs=92.2
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh-----cCCcc-cChHhhhc---cCCEEEEecCCCccccc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA-----LGAQL-VPLDTLCA---ESDFIFVTCALTKDTEQ 1026 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~-----~g~~~-~~l~ell~---~sDvV~l~lPlt~~T~~ 1026 (1128)
++|||||+|.||+.+|..|...|.+|.+||++..+.+ ..+ .++.. .+++++++ .+|+|++++|..+.++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 4799999999999999999999999999987766544 332 34543 47888874 89999999998778888
Q ss_pred ccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEecc
Q psy13054 1027 LIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVM 1073 (1128)
Q Consensus 1027 li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~ 1073 (1128)
++. +....+++|.++|+++.|...+...+.+.+.+..+.....-|+
T Consensus 83 vl~-~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 128 (482)
T 2pgd_A 83 FIE-KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVS 128 (482)
T ss_dssp HHH-HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCC
Confidence 874 5667899999999999999888888888887755544433443
No 143
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.34 E-value=6.2e-07 Score=100.24 Aligned_cols=136 Identities=16% Similarity=0.111 Sum_probs=92.4
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhc-------CCccc-ChHhhhccCCEEEEecCCCccc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTAL-------GAQLV-PLDTLCAESDFIFVTCALTKDT 1024 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~-------g~~~~-~l~ell~~sDvV~l~lPlt~~T 1024 (1128)
-+.|+|||||+|.||..+|+.+. .|.+|++||+.....+ ..+. +++.. ++++ +++||+|+.++|...+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 46799999999999999999999 9999999997765443 2222 34433 6776 89999999999999887
Q ss_pred ccccCHHHHccCCCCcEEE-EcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHH
Q psy13054 1025 EQLIGRKQFSLMKPTAILV-NTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAV 1103 (1128)
Q Consensus 1025 ~~li~~~~l~~mk~ga~lI-N~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~ 1103 (1128)
+..+=+ .++.+ ++++++ |+|.-++ ..+.++++ ......++..|. |. ...+-+.++|+-.+ ++++
T Consensus 88 k~~l~~-~l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~--Pv------~~~~lveiv~g~~t-~~~~ 152 (293)
T 1zej_A 88 KVEVLR-EVERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN--PP------HVMPLVEIVISRFT-DSKT 152 (293)
T ss_dssp HHHHHH-HHHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS--ST------TTCCEEEEEECTTC-CHHH
T ss_pred HHHHHH-HHhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC--cc------ccCCEEEEECCCCC-CHHH
Confidence 665533 36777 999985 8877443 45555443 233456666665 32 23456667766332 3444
Q ss_pred HHH
Q psy13054 1104 RDE 1106 (1128)
Q Consensus 1104 ~~~ 1106 (1128)
.++
T Consensus 153 ~~~ 155 (293)
T 1zej_A 153 VAF 155 (293)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 144
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.28 E-value=6.9e-07 Score=106.53 Aligned_cols=116 Identities=19% Similarity=0.227 Sum_probs=91.1
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hh-hcC-------Ccc-cChHhhhcc---CCEEEEecCCCcc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GT-ALG-------AQL-VPLDTLCAE---SDFIFVTCALTKD 1023 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~-~~g-------~~~-~~l~ell~~---sDvV~l~lPlt~~ 1023 (1128)
.+|||||+|.||+.+|..|...|.+|.+||+...+.+ .. ..| +.. .+++++++. +|+|++++|..+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 3699999999999999999999999999987655443 22 224 332 378888874 9999999998777
Q ss_pred cccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEecc
Q psy13054 1024 TEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVM 1073 (1128)
Q Consensus 1024 T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~ 1073 (1128)
++.++ ++....++++.++|+++.|...+.+.+.+.+.+..+.....-|.
T Consensus 82 v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~ 130 (478)
T 1pgj_A 82 TDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGIS 130 (478)
T ss_dssp HHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred HHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeecc
Confidence 88877 45667889999999999998888888999998765554433444
No 145
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.28 E-value=9.7e-07 Score=87.70 Aligned_cols=91 Identities=12% Similarity=0.179 Sum_probs=71.3
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--hhhcCCc---ccChHhhhccCCEEEEecCCCcccccccC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--GTALGAQ---LVPLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g~~---~~~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
.+++|+|||.|.||+.+++.|+..|++|.++++...+.. ....+.. ..+++++++++|+|++++|.. ..+++
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~ 96 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVE 96 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEee
Confidence 388999999999999999999999999989987665543 3344543 247889999999999999966 34555
Q ss_pred HHHHccCCCCcEEEEcCCCccc
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLL 1051 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lV 1051 (1128)
. +.+++|.++++++...-+
T Consensus 97 ~---~~l~~g~~vid~~~p~~~ 115 (144)
T 3oj0_A 97 E---RSLMPGKLFIDLGNPPNI 115 (144)
T ss_dssp G---GGCCTTCEEEECCSSCSB
T ss_pred H---HHcCCCCEEEEccCCccC
Confidence 4 456789999999876433
No 146
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.27 E-value=6.3e-07 Score=95.47 Aligned_cols=94 Identities=19% Similarity=0.181 Sum_probs=73.0
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHH
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQF 1033 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l 1033 (1128)
.+++|+|||+|.||+.+++.|...|.+|.+++++..+.+ ..+.++...+++++++++|+|++++|. ...+.+++ +
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~-~~~~~v~~---l 102 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFR-EHYSSLCS---L 102 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCG-GGSGGGGG---G
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCCh-HHHHHHHH---H
Confidence 457899999999999999999999999999987654433 333366656888999999999999994 45666663 4
Q ss_pred ccCCCCcEEEEcCCCcccC
Q psy13054 1034 SLMKPTAILVNTSRGGLLD 1052 (1128)
Q Consensus 1034 ~~mk~ga~lIN~aRG~lVd 1052 (1128)
+.+.+++++|++++|...+
T Consensus 103 ~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 103 SDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp HHHHTTCEEEECCCCCHHH
T ss_pred HHhcCCCEEEEeCCCcccc
Confidence 4444899999999997654
No 147
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.26 E-value=3.7e-06 Score=96.63 Aligned_cols=162 Identities=14% Similarity=0.156 Sum_probs=105.9
Q ss_pred CCccEEEEccccCCcCChhhhhhCCcEEEEc---CCCC-----hhHHHHHHH--HHHHHHHhccHHHHHHHHcCC-Cccc
Q psy13054 874 ENLKVITTFSVGYDHLELHEIKARGIRVGSV---GHIS-----SDTVAEYNI--GLAIAVSRRFQEGRKCITSGE-WALK 942 (1128)
Q Consensus 874 ~~LK~I~~~~aGvd~idl~a~~~~GI~V~n~---p~~~-----a~sVAE~al--aliL~~~R~i~~~~~~~~~g~-w~~~ 942 (1128)
+++.++......++.-.++.+.++||...|. |.-. -.++++.+- +.++.+..-.. . ..|+ +.
T Consensus 86 ~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~nt~~-~----~~g~G~~-- 158 (361)
T 1pjc_A 86 KDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARFLER-Q----QGGRGVL-- 158 (361)
T ss_dssp TTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHHHTSG-G----GTSCCCC--
T ss_pred CCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHHHHhh-c----cCCCcee--
Confidence 5665555555555555567778888888764 4321 135555444 44444422111 0 1111 10
Q ss_pred cccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc--------cChHhhhccCCE
Q psy13054 943 QTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL--------VPLDTLCAESDF 1013 (1128)
Q Consensus 943 ~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~--------~~l~ell~~sDv 1013 (1128)
.. ....+.+++|.|+|.|.+|+.+++.++.+|++|+++|++..+.+ ..+.+... .++.+.++.+|+
T Consensus 159 ----l~-~l~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 233 (361)
T 1pjc_A 159 ----LG-GVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADL 233 (361)
T ss_dssp ----TT-CBTTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSE
T ss_pred ----cc-CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCE
Confidence 00 11247789999999999999999999999999999997765543 22222211 246677889999
Q ss_pred EEEecCCCc-ccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1014 IFVTCALTK-DTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1014 V~l~lPlt~-~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
|+.+++... .+..++.++.++.|++++++|+++-
T Consensus 234 VI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 234 LIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp EEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred EEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 999987533 2455678889999999999999974
No 148
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.18 E-value=1.1e-06 Score=97.52 Aligned_cols=92 Identities=15% Similarity=0.192 Sum_probs=74.2
Q ss_pred CeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHc
Q psy13054 957 ATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFS 1034 (1128)
Q Consensus 957 ktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~ 1034 (1128)
++|||||+ |.||+.+|+.|...|.+|++||++..+.+ ..+.|+...++.++++++|+|++++|... ++.++ ++...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~~ 89 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNI-IEKVA-EDIVP 89 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHHH
Confidence 58999999 99999999999999999999987654433 33456655678889999999999999544 66666 35556
Q ss_pred cCCCCcEEEEcCCCcc
Q psy13054 1035 LMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1035 ~mk~ga~lIN~aRG~l 1050 (1128)
.+++++++|+++.|..
T Consensus 90 ~l~~~~ivv~~s~~~~ 105 (286)
T 3c24_A 90 RVRPGTIVLILDAAAP 105 (286)
T ss_dssp GSCTTCEEEESCSHHH
T ss_pred hCCCCCEEEECCCCch
Confidence 7899999999988873
No 149
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.18 E-value=5.1e-06 Score=98.11 Aligned_cols=180 Identities=14% Similarity=0.136 Sum_probs=111.8
Q ss_pred CCCChhHHHHHHHHHHHHHHhccHHHHHHHHcCCCccccccc-cCCcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEE
Q psy13054 905 GHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHI-IGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKI 983 (1128)
Q Consensus 905 p~~~a~sVAE~alaliL~~~R~i~~~~~~~~~g~w~~~~~~~-~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi 983 (1128)
.|-|-..|-|.+.+++|...| ..++|..+.... |. ......=++|||||+|.||..+|..+...|.+|+
T Consensus 12 ~~~~~~~~~~~~~~~~~~a~~---------~~~~w~~p~~~~~~~-~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~ 81 (460)
T 3k6j_A 12 TGENLYFQGSEVRSYLMEAHS---------LAGQWSLPNDRGDHT-NSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETF 81 (460)
T ss_dssp TSGGGGGCBCHHHHHHHHTTC---------CTTSCBCSTTSCBTT-SCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred cccchhhhhHHHHHHHHhHHH---------hhccccCCCCccccc-cCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEE
Confidence 344555666777777776322 345687431110 11 1111223689999999999999999999999999
Q ss_pred EEeCCCCchh---------hhhcCC-------------cc-cChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCc
Q psy13054 984 LYTSRRVKEE---------GTALGA-------------QL-VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTA 1040 (1128)
Q Consensus 984 ~~d~~~~~~~---------~~~~g~-------------~~-~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga 1040 (1128)
+||....+.. ..+.|. +. .+++ .+++||+|+.++|.+.+.+.-+=++..+.+++++
T Consensus 82 l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~a 160 (460)
T 3k6j_A 82 LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTC 160 (460)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTC
T ss_pred EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCC
Confidence 9997665211 112221 12 3564 6899999999999887765444356777899999
Q ss_pred EEE-EcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHH
Q psy13054 1041 ILV-NTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKS 1108 (1128)
Q Consensus 1041 ~lI-N~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~ 1108 (1128)
+|+ |+|. +....+.+.++. +-...++..|. |.+ .++-|-++|+-. .++++.+++.
T Consensus 161 IlasnTSs---l~i~~ia~~~~~-p~r~iG~Hffn--Pv~------~m~LvEIv~g~~-Ts~e~~~~~~ 216 (460)
T 3k6j_A 161 IFGTNTSS---LDLNEISSVLRD-PSNLVGIHFFN--PAN------VIRLVEIIYGSH-TSSQAIATAF 216 (460)
T ss_dssp EEEECCSS---SCHHHHHTTSSS-GGGEEEEECCS--STT------TCCEEEEECCSS-CCHHHHHHHH
T ss_pred EEEecCCC---hhHHHHHHhccC-CcceEEEEecc--hhh------hCCEEEEEeCCC-CCHHHHHHHH
Confidence 996 5553 445666666643 33566777776 322 234456666532 3444444443
No 150
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.18 E-value=9.3e-07 Score=96.73 Aligned_cols=98 Identities=14% Similarity=0.176 Sum_probs=76.0
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCE-EEEEeCCCCchh-h-hhcCCcc-cChHhhhccCCEEEEecCCCcccccccC
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVS-KILYTSRRVKEE-G-TALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~-Vi~~d~~~~~~~-~-~~~g~~~-~~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
+.+.+|||||+|.||+.+|+.+...|.+ |.+||+...+.+ . ...++.. .+++++++++|+|++++|.. ..+.++.
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~v~~ 86 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAELLQ 86 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHHHHH
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHHHHH
Confidence 4567899999999999999999988998 788886554433 2 2336654 37889999999999999965 4455553
Q ss_pred HHHHccCCCCcEEEEcCCCcccCH
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQ 1053 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde 1053 (1128)
+....+++++++|+++.|...+.
T Consensus 87 -~l~~~~~~~~ivv~~s~~~~~~~ 109 (266)
T 3d1l_A 87 -GIVEGKREEALMVHTAGSIPMNV 109 (266)
T ss_dssp -HHHTTCCTTCEEEECCTTSCGGG
T ss_pred -HHHhhcCCCcEEEECCCCCchHH
Confidence 45567889999999999877543
No 151
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.17 E-value=3.7e-06 Score=95.10 Aligned_cols=129 Identities=19% Similarity=0.088 Sum_probs=89.4
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hh-----------hcC--------------Ccc-cChHhhh
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GT-----------ALG--------------AQL-VPLDTLC 1008 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~-----------~~g--------------~~~-~~l~ell 1008 (1128)
-++|||||.|.||..+|..+...|.+|++||+.....+ .. +.| ++. .++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 36899999999999999999999999999997765433 11 122 122 3788999
Q ss_pred ccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCC
Q psy13054 1009 AESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLD 1088 (1128)
Q Consensus 1009 ~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~p 1088 (1128)
+.||+|+.++|...+.+.-+=++..+.++++++++..+.+ +....+.+.+.. +-...++.-+. |. ...+
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~--P~------~~~~ 154 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN--PP------YYIP 154 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS--ST------TTCC
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC--ch------hhcc
Confidence 9999999999987766543335677788999999865555 445667766643 23444555554 21 1234
Q ss_pred CeEECCC
Q psy13054 1089 NCVLTPH 1095 (1128)
Q Consensus 1089 NvilTPH 1095 (1128)
-+.++|+
T Consensus 155 lveiv~g 161 (319)
T 2dpo_A 155 LVELVPH 161 (319)
T ss_dssp EEEEEEC
T ss_pred eEEEeCC
Confidence 4666665
No 152
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.11 E-value=2.4e-06 Score=90.67 Aligned_cols=79 Identities=15% Similarity=0.196 Sum_probs=63.2
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHH
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQ 1032 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~ 1032 (1128)
++.+++|+|||+|.||+.+|+.|...|.+|.+||++.. .+++||+|++++| .+.++.++. +.
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~----------------~~~~aD~vi~av~-~~~~~~v~~-~l 77 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ----------------ATTLGEIVIMAVP-YPALAALAK-QY 77 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC----------------CSSCCSEEEECSC-HHHHHHHHH-HT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH----------------HhccCCEEEEcCC-cHHHHHHHH-HH
Confidence 57889999999999999999999999999999975432 5678999999999 777777764 34
Q ss_pred HccCCCCcEEEEcCCCcc
Q psy13054 1033 FSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~l 1050 (1128)
...++ ++++|++++|--
T Consensus 78 ~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 78 ATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp HHHHT-TSEEEECCCCBC
T ss_pred HHhcC-CCEEEEECCCCC
Confidence 45677 999999999765
No 153
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.06 E-value=8.4e-06 Score=88.72 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=75.6
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-h-hhcCCccc-ChHhhhccCCEEEEecCCCcccccccCHHHH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-G-TALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQF 1033 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~-~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l 1033 (1128)
.+|||||+|.||+.+++.|...|..|.+||++..+.. . ...|+... +++++++++|+|++++| ..... +.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~-----~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFE-----TVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHH-----HHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHH-----HHH
Confidence 4799999999999999999999999999987655433 2 23466543 78899999999999999 44443 445
Q ss_pred ccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1034 SLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1034 ~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
..++++.++|++..|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 55778999999977643 45577777654
No 154
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.03 E-value=2.6e-06 Score=89.77 Aligned_cols=114 Identities=17% Similarity=0.176 Sum_probs=81.8
Q ss_pred eEEEEE-cChhhHHHHHHHhhCCCEEEEEeCCCCchh-h-hhcC-------CcccChHhhhccCCEEEEecCCCcccccc
Q psy13054 958 TVGIVG-LGNIGLETAKLLKAFKVSKILYTSRRVKEE-G-TALG-------AQLVPLDTLCAESDFIFVTCALTKDTEQL 1027 (1128)
Q Consensus 958 tvGIIG-~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~-~~~g-------~~~~~l~ell~~sDvV~l~lPlt~~T~~l 1027 (1128)
+|+||| .|.||+.+++.|...|.+|.+++++..+.. . ...+ +...+++++++++|+|++++| .+.++.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~-~~~~~~~ 80 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIP-WEHAIDT 80 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSC-HHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCC-hhhHHHH
Confidence 699999 999999999999999999999987654432 1 1112 333478888999999999999 3445555
Q ss_pred cCHHHHccCCCCcEEEEcCCCcccC------------HHHHHHHHhcCCceEEEEeccCCCCC
Q psy13054 1028 IGRKQFSLMKPTAILVNTSRGGLLD------------QEALVEFLKDKKIGGAGLDVMIPEPL 1078 (1128)
Q Consensus 1028 i~~~~l~~mk~ga~lIN~aRG~lVd------------e~aL~~aL~~g~i~gaaLDV~e~EPl 1078 (1128)
+. +....++ +.++|+++.|--.+ .+.+.+.+...+ .++++.++|.
T Consensus 81 ~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~v~~~~~~~~ 137 (212)
T 1jay_A 81 AR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEK----VVSALHTIPA 137 (212)
T ss_dssp HH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSC----EEECCTTCCH
T ss_pred HH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCCe----EEEEccchHH
Confidence 43 2333454 99999999876543 577777776433 3677777664
No 155
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.03 E-value=4.3e-06 Score=90.65 Aligned_cols=102 Identities=15% Similarity=0.246 Sum_probs=77.1
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC----EEEEEeCCCCchh-h-hhcCCccc-ChHhhhccCCEEEEecCCCcccccccC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV----SKILYTSRRVKEE-G-TALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~----~Vi~~d~~~~~~~-~-~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
++|||||+|+||+.+++.|...|. +|.+||++..+.+ . ...|+... +++++++++|+|++++| ....+.++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~-~~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIK-PDLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSC-TTTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeC-HHHHHHHH-
Confidence 589999999999999999999998 9999987665544 2 34577654 78999999999999997 44555555
Q ss_pred HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhc
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD 1062 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~ 1062 (1128)
++....++++.++|.+.-|- ..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 34556688999999776553 35667676654
No 156
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.03 E-value=7.6e-06 Score=96.36 Aligned_cols=136 Identities=18% Similarity=0.137 Sum_probs=89.5
Q ss_pred eEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh-------------------cC-Ccc-cChHhhhccCCEEE
Q psy13054 958 TVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA-------------------LG-AQL-VPLDTLCAESDFIF 1015 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~-------------------~g-~~~-~~l~ell~~sDvV~ 1015 (1128)
+|+|||+|.||..+|..|...|.+|++||....+.+ ..+ .+ +.. .++++.++.||+|+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvvi 81 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSF 81 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEEE
Confidence 799999999999999999999999999987654433 111 12 222 36778899999999
Q ss_pred EecCCCcccccccC--------HHHHccCCC---CcEEEEcCCCcccC-HHHHHHHHhc--CCceEEEEe-ccCCCCCCC
Q psy13054 1016 VTCALTKDTEQLIG--------RKQFSLMKP---TAILVNTSRGGLLD-QEALVEFLKD--KKIGGAGLD-VMIPEPLPA 1080 (1128)
Q Consensus 1016 l~lPlt~~T~~li~--------~~~l~~mk~---ga~lIN~aRG~lVd-e~aL~~aL~~--g~i~gaaLD-V~e~EPl~~ 1080 (1128)
+++|......+..| ++....+++ ++++|+.|...+-. ++.+.+.+++ |...+.... ++.+|.+.+
T Consensus 82 iaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~~~~ 161 (436)
T 1mv8_A 82 ICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRE 161 (436)
T ss_dssp ECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCCCCT
T ss_pred EEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECcccccc
Confidence 99996655222222 334456788 99999998766655 5667777765 321111112 245666655
Q ss_pred CCcc---ccCCCeEEC
Q psy13054 1081 DHPL---VQLDNCVLT 1093 (1128)
Q Consensus 1081 ~~pL---~~~pNvilT 1093 (1128)
.... ...+.+++.
T Consensus 162 G~~~~~~~~~~~iv~G 177 (436)
T 1mv8_A 162 STAIKDYDFPPMTVIG 177 (436)
T ss_dssp TSHHHHHHSCSCEEEE
T ss_pred cccchhccCCCEEEEE
Confidence 4442 334455543
No 157
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=98.01 E-value=4.6e-06 Score=95.36 Aligned_cols=64 Identities=17% Similarity=0.260 Sum_probs=56.7
Q ss_pred cccCCcccCHHHHhh-cCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCe
Q psy13054 305 TALGAQLVPLDTLCA-ESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKI 375 (1128)
Q Consensus 305 ~~~g~~~vsLdeLl~-~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~I 375 (1128)
+++++++++++++++ +|||++- ..|.++||++.+++|| ..++||+|||++++++| .++|+++.|
T Consensus 215 ~~~ga~~v~~~ell~~~~DIliP-----~A~~~~I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gI 279 (355)
T 1c1d_A 215 VALGHTAVALEDVLSTPCDVFAP-----CAMGGVITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGI 279 (355)
T ss_dssp HHTTCEECCGGGGGGCCCSEEEE-----CSCSCCBCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTC
T ss_pred HhcCCEEeChHHhhcCccceecH-----hHHHhhcCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCE
Confidence 346788889999999 9999984 4799999999999998 78999999999999888 699999886
No 158
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=97.99 E-value=1.2e-05 Score=90.74 Aligned_cols=105 Identities=15% Similarity=0.193 Sum_probs=79.9
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCC----CEEEEEeCCCC--chh-hhhcCCccc-ChHhhhccCCEEEEecCCCcccc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFK----VSKILYTSRRV--KEE-GTALGAQLV-PLDTLCAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG----~~Vi~~d~~~~--~~~-~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~ 1025 (1128)
+...+|||||+|.||..+|..|...| .+|.+||++.. +.+ ..+.|+... +..++++++|+|++++| ....+
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHH
Confidence 34468999999999999999999888 78999987664 332 445577654 78899999999999999 56666
Q ss_pred cccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhc
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD 1062 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~ 1062 (1128)
.++. +....++++.++|+++-|- ..+.+.+.+.+
T Consensus 99 ~vl~-~l~~~l~~~~ivvs~s~gi--~~~~l~~~l~~ 132 (322)
T 2izz_A 99 FILD-EIGADIEDRHIVVSCAAGV--TISSIEKKLSA 132 (322)
T ss_dssp HHHH-HHGGGCCTTCEEEECCTTC--CHHHHHHHHHT
T ss_pred HHHH-HHHhhcCCCCEEEEeCCCC--CHHHHHHHHhh
Confidence 6663 4555688999999997764 34566666764
No 159
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.95 E-value=9.1e-06 Score=91.55 Aligned_cols=90 Identities=14% Similarity=0.235 Sum_probs=70.4
Q ss_pred CCCeEEEEEcChhhHHHHHHHhh-CCC-EEEEEeCCCCchh--hhhcC--Ccc-cChHhhhccCCEEEEecCCCcccccc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKA-FKV-SKILYTSRRVKEE--GTALG--AQL-VPLDTLCAESDFIFVTCALTKDTEQL 1027 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~a-fG~-~Vi~~d~~~~~~~--~~~~g--~~~-~~l~ell~~sDvV~l~lPlt~~T~~l 1027 (1128)
..++|||||+|.+|+.+++.+.. +|. +|.+||++..+.+ ....+ +.. .+++++++++|+|++++|. ++.+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~---~~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA---TEPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC---SSCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCC---CCcc
Confidence 46789999999999999999865 487 8999987665544 23334 443 4799999999999999994 3556
Q ss_pred cCHHHHccCCCCcEEEEcCCCcc
Q psy13054 1028 IGRKQFSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1028 i~~~~l~~mk~ga~lIN~aRG~l 1050 (1128)
+.. +.+++|.++++++....
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCST
T ss_pred cCH---HHcCCCcEEEeCCCCCC
Confidence 765 57899999999987665
No 160
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.93 E-value=2.1e-05 Score=92.25 Aligned_cols=132 Identities=17% Similarity=0.231 Sum_probs=91.6
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh------------------cCCcc-cChHhhhccCC
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA------------------LGAQL-VPLDTLCAESD 1012 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~------------------~g~~~-~~l~ell~~sD 1012 (1128)
+..-++|+|||+|.+|..+|..|.. |.+|++||....+.+ ..+ .+++. .++++.++.||
T Consensus 33 ~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 33 GSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred ccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence 4455689999999999999999988 999999997665433 111 12333 36889999999
Q ss_pred EEEEecCCCccc-------ccccC--HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCc
Q psy13054 1013 FIFVTCALTKDT-------EQLIG--RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHP 1083 (1128)
Q Consensus 1013 vV~l~lPlt~~T-------~~li~--~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~p 1083 (1128)
+|++++|...+. ..+.. +...+ +++|+++|+.|.-.+-..+.+.+.+.+..+ +|.||-+.+...
T Consensus 112 vViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v------~~sPe~~~~G~A 184 (432)
T 3pid_A 112 YVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV------IFSPEFLREGRA 184 (432)
T ss_dssp EEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE------EECCCCCCTTSH
T ss_pred EEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE------eecCccCCcchh
Confidence 999999965321 12221 34455 999999999999988888999998877533 245665544443
Q ss_pred c---ccCCCeEE
Q psy13054 1084 L---VQLDNCVL 1092 (1128)
Q Consensus 1084 L---~~~pNvil 1092 (1128)
+ +..+.|++
T Consensus 185 ~~~~l~p~rIvv 196 (432)
T 3pid_A 185 LYDNLHPSRIVI 196 (432)
T ss_dssp HHHHHSCSCEEE
T ss_pred hhcccCCceEEe
Confidence 3 33445543
No 161
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.92 E-value=3.4e-05 Score=86.16 Aligned_cols=115 Identities=11% Similarity=0.100 Sum_probs=77.4
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hh-----------hcC------------------Ccc-cChH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GT-----------ALG------------------AQL-VPLD 1005 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~-----------~~g------------------~~~-~~l~ 1005 (1128)
++|+|||+|.||..+|..+...|.+|++||+...+.+ .. +.| ++. .+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999987654322 10 112 122 3677
Q ss_pred hhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccC
Q psy13054 1006 TLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMI 1074 (1128)
Q Consensus 1006 ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e 1074 (1128)
+.++.||+|++++|...+.+.-+-++..+.++++++++..+.+ +....+.+.+... -..+++..+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~--i~~~~l~~~~~~~-~~~~g~h~~~ 161 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSS--LQITSIANATTRQ-DRFAGLHFFN 161 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSS--SCHHHHHTTSSCG-GGEEEEEECS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCC--CCHHHHHHhcCCc-ccEEEEecCC
Confidence 7899999999999976554333323455567899999854444 3345565555422 1234555554
No 162
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.86 E-value=1e-05 Score=88.16 Aligned_cols=98 Identities=19% Similarity=0.209 Sum_probs=73.0
Q ss_pred eEEEEEcChhhHHHHHHHhhCC-CEEEEEeCCCCchh-hh-hcCCccc-ChHhhhccCCEEEEecCCCcccccccCHHHH
Q psy13054 958 TVGIVGLGNIGLETAKLLKAFK-VSKILYTSRRVKEE-GT-ALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQF 1033 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~afG-~~Vi~~d~~~~~~~-~~-~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~~~l 1033 (1128)
+|||||+|.||+.+|+.|...| .+|.+||++..+.. .. ..|+... ++++++ ++|+|++++| ....+.++.. +
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~~~--l 77 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAACKN--I 77 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHHTT--C
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHHHH--h
Confidence 7999999999999999999889 99999987655443 22 2466654 677888 9999999999 6665555431 2
Q ss_pred ccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1034 SLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1034 ~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
.. + +.++|+++.|-- .+.|.+.+..+
T Consensus 78 ~~-~-~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 78 RT-N-GALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp CC-T-TCEEEECCTTCC--HHHHHHHTTSC
T ss_pred cc-C-CCEEEEecCCCC--HHHHHHHcCCC
Confidence 22 4 899999966543 36777777664
No 163
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=97.84 E-value=6.4e-05 Score=81.71 Aligned_cols=98 Identities=15% Similarity=0.286 Sum_probs=70.8
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCC----CEEEEEeCCCCchhhhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCH
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFK----VSKILYTSRRVKEEGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG----~~Vi~~d~~~~~~~~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
..+|||||+|.||+.+|+.|...| .+|.+||++..+ .|+... +.+++++++|+|++++| ...++.++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~- 76 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN- 76 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH-
Confidence 468999999999999999998888 689999876554 455544 78899999999999999 456665553
Q ss_pred HHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1031 KQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1031 ~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
+....++ +..+|....| ++.+.+.+.+..+
T Consensus 77 ~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~~ 106 (262)
T 2rcy_A 77 NIKPYLS-SKLLISICGG--LNIGKLEEMVGSE 106 (262)
T ss_dssp HSGGGCT-TCEEEECCSS--CCHHHHHHHHCTT
T ss_pred HHHHhcC-CCEEEEECCC--CCHHHHHHHhCCC
Confidence 3344554 5555555444 3345666666654
No 164
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.83 E-value=1.8e-05 Score=87.69 Aligned_cols=109 Identities=11% Similarity=0.092 Sum_probs=81.5
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCC---EEEEEeCCCCchh-hh-hcCCccc-ChHhhhccCCEEEEecCCCcccccccC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKV---SKILYTSRRVKEE-GT-ALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~---~Vi~~d~~~~~~~-~~-~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
.++|||||+|+||+.+++.+...|. +|.+||++..+.+ .. ..|+... +..+++++||+|++++|. ...+.++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl~ 81 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVCE 81 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHHH
Confidence 4789999999999999999999898 8999997766554 22 3477654 788999999999999983 44555553
Q ss_pred HHHHcc-CCCCcEEEEcCCCcccCHHHHHHHHhcC-CceEE
Q psy13054 1030 RKQFSL-MKPTAILVNTSRGGLLDQEALVEFLKDK-KIGGA 1068 (1128)
Q Consensus 1030 ~~~l~~-mk~ga~lIN~aRG~lVde~aL~~aL~~g-~i~ga 1068 (1128)
+.-.. ++++.++|+++-|- ..+.|.+.+..+ ++.++
T Consensus 82 -~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~~~~vvr~ 119 (280)
T 3tri_A 82 -ELKDILSETKILVISLAVGV--TTPLIEKWLGKASRIVRA 119 (280)
T ss_dssp -HHHHHHHTTTCEEEECCTTC--CHHHHHHHHTCCSSEEEE
T ss_pred -HHHhhccCCCeEEEEecCCC--CHHHHHHHcCCCCeEEEE
Confidence 33334 68888999887664 457788888653 44333
No 165
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=97.82 E-value=4e-05 Score=90.43 Aligned_cols=105 Identities=12% Similarity=0.182 Sum_probs=80.0
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcC---------------------Ccc-cChHhhhccCCEE
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALG---------------------AQL-VPLDTLCAESDFI 1014 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g---------------------~~~-~~l~ell~~sDvV 1014 (1128)
-+++|||+|.+|.++|..|...|.+|++||....+.+....+ .+. .++.+.+++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 469999999999999999999999999999887765411111 223 3788999999999
Q ss_pred EEecCCCcc----------cccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhc
Q psy13054 1015 FVTCALTKD----------TEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD 1062 (1128)
Q Consensus 1015 ~l~lPlt~~----------T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~ 1062 (1128)
++|+|.... .+..+ +...+.|+++.++|+.|.-.+-..+.+.+.+++
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999985432 23333 356678999999999997666666777777765
No 166
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=97.76 E-value=4e-05 Score=91.34 Aligned_cols=117 Identities=20% Similarity=0.255 Sum_probs=82.5
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh-----------cCC-------------cc-cChHhhhc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA-----------LGA-------------QL-VPLDTLCA 1009 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~-----------~g~-------------~~-~~l~ell~ 1009 (1128)
-++|||||+|.||..+|..+...|.+|++||.+....+ ..+ .|. +. .+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 36899999999999999999999999999997665433 111 221 12 2454 689
Q ss_pred cCCEEEEecCCCcccccccCHHHHccCCCCcEE-EEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCC
Q psy13054 1010 ESDFIFVTCALTKDTEQLIGRKQFSLMKPTAIL-VNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEP 1077 (1128)
Q Consensus 1010 ~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~l-IN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EP 1077 (1128)
+||+|+.++|...+.+.-+=++..+.+++++++ .|+|.-. ...+.+.+.. +-..+++..|.+-|
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~---i~~ia~~~~~-p~~~ig~hf~~Pa~ 148 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSIS---ITAIAAEIKN-PERVAGLHFFNPAP 148 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSC---HHHHTTTSSS-GGGEEEEEECSSTT
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCC---HHHHHHHccC-ccceEEeeecChhh
Confidence 999999999988766543334567788999999 4776543 4566665543 33566777776544
No 167
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.75 E-value=4.1e-05 Score=90.51 Aligned_cols=105 Identities=16% Similarity=0.216 Sum_probs=78.0
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh-------------------c-CCcc-cChHhhhccCCEE
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA-------------------L-GAQL-VPLDTLCAESDFI 1014 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~-------------------~-g~~~-~~l~ell~~sDvV 1014 (1128)
++|+|||+|.+|..+|..|...|.+|++||....+.+ ..+ . .++. .+++++++.||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 5899999999999999999999999999997655433 111 1 1222 3688899999999
Q ss_pred EEecCCCc---------ccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhc
Q psy13054 1015 FVTCALTK---------DTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD 1062 (1128)
Q Consensus 1015 ~l~lPlt~---------~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~ 1062 (1128)
++++|... ..+..+ +.....++++.++|+.|.-.+-..+.+.+.+++
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999653 233333 355677899999999997555556666666654
No 168
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.73 E-value=4.8e-05 Score=83.89 Aligned_cols=105 Identities=14% Similarity=0.028 Sum_probs=77.7
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFS 1034 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~ 1034 (1128)
|+++.|+|.|.+|++++..|...|.+|.++++...+.+ ..+.++...+++++- ++|+|++++|..-.....++.+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l~-~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKS-AFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCSS-CCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHhc-cCCEEEEcccCCCCCCCCCChHHHH
Confidence 89999999999999999999999999999998877664 225565555666654 9999999999764332346665433
Q ss_pred -cCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1035 -LMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1035 -~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
.++++.+++++.... .+.-+..|-+.|
T Consensus 197 ~~l~~~~~v~D~vY~P--~T~ll~~A~~~G 224 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF--LTPFLSLAKELK 224 (269)
T ss_dssp HHHHHCSEEEESCCSS--CCHHHHHHHHTT
T ss_pred hhCCCCCEEEEeCCCC--chHHHHHHHHCc
Confidence 567888888888875 555334444444
No 169
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.71 E-value=6.9e-05 Score=82.36 Aligned_cols=119 Identities=13% Similarity=0.192 Sum_probs=85.1
Q ss_pred cCCCeEEEEEcCh-hhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHH
Q psy13054 954 LKGATVGIVGLGN-IGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQ 1032 (1128)
Q Consensus 954 L~gktvGIIG~G~-IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~ 1032 (1128)
++||++.|||.|. +|+.+|..|...|++|.+++++. .++++.+++||+|+.++|.. ++|.++.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t------------~~L~~~~~~ADIVI~Avg~p----~~I~~~~ 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT------------KDIGSMTRSSKIVVVAVGRP----GFLNREM 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHHSSEEEECSSCT----TCBCGGG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc------------ccHHHhhccCCEEEECCCCC----ccccHhh
Confidence 7999999999986 79999999999999999987532 36889999999999999852 4787755
Q ss_pred HccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHHHHHH
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSA 1112 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~~ 1112 (1128)
+|+|+++|++|.-. .| |++- =||...+ ... .--.+||==||.-.-+..-+.+-++
T Consensus 212 ---vk~GavVIDvgi~~-~~----------gkl~---GDVdf~~-------v~~-~a~~iTPVPGGVGpmT~a~Ll~n~v 266 (276)
T 3ngx_A 212 ---VTPGSVVIDVGINY-VN----------DKVV---GDANFED-------LSE-YVEAITPVPGGVGPITATNILENVV 266 (276)
T ss_dssp ---CCTTCEEEECCCEE-ET----------TEEE---CSBCHHH-------HHT-TSSEECCTTTSSHHHHHHHHHHHHH
T ss_pred ---ccCCcEEEEeccCc-cC----------Ccee---ccccHHH-------Hhh-hceEeCCCCCcChHHHHHHHHHHHH
Confidence 49999999999766 22 4443 3553211 001 1246888767765555444444333
Q ss_pred H
Q psy13054 1113 E 1113 (1128)
Q Consensus 1113 ~ 1113 (1128)
+
T Consensus 267 ~ 267 (276)
T 3ngx_A 267 K 267 (276)
T ss_dssp H
T ss_pred H
Confidence 3
No 170
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=97.70 E-value=5.4e-05 Score=85.92 Aligned_cols=103 Identities=14% Similarity=0.158 Sum_probs=74.2
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhc-CC---------------cccChHhhhccCCEEEEecC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTAL-GA---------------QLVPLDTLCAESDFIFVTCA 1019 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~-g~---------------~~~~l~ell~~sDvV~l~lP 1019 (1128)
++|+|||+|.||..+|..|...|.+|.+|+++..+.+ ..+. +. ...+++++++.+|+|++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 5899999999999999999999999999986554433 2222 21 12378888899999999999
Q ss_pred CCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhc
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD 1062 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~ 1062 (1128)
... +..++ ++....+++++++|+. -|.......+.+.+..
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 554 45555 4556678999999999 4422344445555554
No 171
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.69 E-value=8e-05 Score=82.26 Aligned_cols=117 Identities=21% Similarity=0.247 Sum_probs=84.9
Q ss_pred ccCCCeEEEEEcCh-hhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 953 GLKGATVGIVGLGN-IGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 953 ~L~gktvGIIG~G~-IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
+++||++.|||.|. +|+++|..|...|++|.+++++. .++++.+++||+|+.+++. .++|.++
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------~~L~~~~~~ADIVI~Avg~----p~~I~~~ 220 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------KDLSLYTRQADLIIVAAGC----VNLLRSD 220 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHTTCSEEEECSSC----TTCBCGG
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhhcCCEEEECCCC----CCcCCHH
Confidence 58999999999998 69999999999999999987542 3688999999999999984 3567765
Q ss_pred HHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHHH
Q psy13054 1032 QFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSS 1109 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~ 1109 (1128)
. +|+|+++|+++.-.+-| |++-| ||...+- .-.--.+||==||.-.-+..-+.+
T Consensus 221 ~---vk~GavVIDVgi~~~~~----------gkl~G---DVdf~~v--------~~~a~~iTPVPGGVGpmT~a~Ll~ 274 (285)
T 3p2o_A 221 M---VKEGVIVVDVGINRLES----------GKIVG---DVDFEEV--------SKKSSYITPVPGGVGPMTIAMLLE 274 (285)
T ss_dssp G---SCTTEEEEECCCEECTT----------SCEEC---SBCHHHH--------TTTEEEECCSSSSHHHHHHHHHHH
T ss_pred H---cCCCeEEEEeccCcccC----------CCEec---cccHHHH--------HhhheEeCCCCCcCcHHHHHHHHH
Confidence 4 49999999999776533 55533 5532110 001246889767765544433333
No 172
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.68 E-value=8.6e-05 Score=82.01 Aligned_cols=119 Identities=18% Similarity=0.188 Sum_probs=85.4
Q ss_pred ccCCCeEEEEEcCh-hhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 953 GLKGATVGIVGLGN-IGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 953 ~L~gktvGIIG~G~-IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
++.||++.|||.|. +|+.+|..|...|++|.+.+++. .++++.+++||+|+.+++. .++|.++
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I~~~ 221 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------TDLKSHTTKADILIVAVGK----PNFITAD 221 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCBCGG
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------hhHHHhcccCCEEEECCCC----CCCCCHH
Confidence 58999999999998 69999999999999999886532 2688999999999999984 3567765
Q ss_pred HHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHHHHH
Q psy13054 1032 QFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTS 1111 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~ 1111 (1128)
. +|+|+++|+++.-.+- |++- =||...+= .. .--.+||==||.-.-+..-+.+-+
T Consensus 222 ~---vk~GavVIDvgi~~~~-----------g~l~---GDVdf~~v-------~~-~a~~iTPVPGGVGpmT~a~Ll~nt 276 (285)
T 3l07_A 222 M---VKEGAVVIDVGINHVD-----------GKIV---GDVDFAAV-------KD-KVAAITPVPGGVGPMTITELLYNT 276 (285)
T ss_dssp G---SCTTCEEEECCCEEET-----------TEEE---CSBCHHHH-------TT-TCSEECCSSSSSHHHHHHHHHHHH
T ss_pred H---cCCCcEEEEecccCcC-----------Ccee---cCccHHHH-------Hh-hheEeCCCCCcChHHHHHHHHHHH
Confidence 4 4999999999976631 4443 35532110 00 113589977776655554444433
Q ss_pred H
Q psy13054 1112 A 1112 (1128)
Q Consensus 1112 ~ 1112 (1128)
+
T Consensus 277 v 277 (285)
T 3l07_A 277 F 277 (285)
T ss_dssp H
T ss_pred H
Confidence 3
No 173
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=97.67 E-value=9e-05 Score=88.39 Aligned_cols=134 Identities=19% Similarity=0.229 Sum_probs=87.0
Q ss_pred CeEEEEEcChhhHHHHHHHhhC--CCEEEEEeCCCCchh-hhhc-------------------CCcc-cChHhhhccCCE
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF--KVSKILYTSRRVKEE-GTAL-------------------GAQL-VPLDTLCAESDF 1013 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af--G~~Vi~~d~~~~~~~-~~~~-------------------g~~~-~~l~ell~~sDv 1013 (1128)
++|+|||+|.||..+|..|... |.+|++||.+..+.+ ..+. +... .++.+.++.||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999776 799999987655433 1110 1222 256788899999
Q ss_pred EEEecCCCcc--------------cccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhc-CCceEEEEe---ccCC
Q psy13054 1014 IFVTCALTKD--------------TEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD-KKIGGAGLD---VMIP 1075 (1128)
Q Consensus 1014 V~l~lPlt~~--------------T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~-g~i~gaaLD---V~e~ 1075 (1128)
|++++|.... .+..+ +.....++++.++|+.|.-.+-..+.+.+.+++ ..+.. ++| ++-+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~-~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~-~~d~~v~~~P 167 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVS-RTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNE-NLKFQVLSNP 167 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC-----CCEEEEECC
T ss_pred EEEecCCccccccccccCCCcHHHHHHHH-HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCc-CCceEEEeCc
Confidence 9999985432 12222 345667999999999887666566777787876 33211 122 2455
Q ss_pred CCCCCCCc---cccCCCeEE
Q psy13054 1076 EPLPADHP---LVQLDNCVL 1092 (1128)
Q Consensus 1076 EPl~~~~p---L~~~pNvil 1092 (1128)
|-..+... +...+.+++
T Consensus 168 e~~~~G~a~~~~~~~~~ivi 187 (481)
T 2o3j_A 168 EFLAEGTAMKDLANPDRVLI 187 (481)
T ss_dssp CCCCTTCHHHHHHSCSCEEE
T ss_pred ccccccchhhcccCCCEEEE
Confidence 55444432 344456654
No 174
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.67 E-value=7.3e-05 Score=82.63 Aligned_cols=127 Identities=14% Similarity=0.142 Sum_probs=91.7
Q ss_pred ccCCCeEEEEEcCh-hhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 953 GLKGATVGIVGLGN-IGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 953 ~L~gktvGIIG~G~-IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
+++|+++.|||.|+ +|+.+|+.|...|++|.+++++. .++.+.+++||+|+.+++.. ++|.++
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~p----~lI~~~ 219 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------KNLRHHVENADLLIVAVGKP----GFIPGD 219 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------SCHHHHHHHCSEEEECSCCT----TCBCTT
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhccCCEEEECCCCc----CcCCHH
Confidence 58999999999997 59999999999999999987443 36889999999999999933 367766
Q ss_pred HHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHHHHH
Q psy13054 1032 QFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTS 1111 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~~ 1111 (1128)
. +|+|+++|++|.-.+-| |++- =||-..+ .... --.+||==||.-.-+..-+.+-+
T Consensus 220 ~---vk~GavVIDVgi~r~~~----------g~l~---GDVdf~~-------v~~~-a~~iTPVPGGVGpmT~a~Ll~Nt 275 (288)
T 1b0a_A 220 W---IKEGAIVIDVGINRLEN----------GKVV---GDVVFED-------AAKR-ASYITPVPGGVGPMTVATLIENT 275 (288)
T ss_dssp T---SCTTCEEEECCCEECTT----------SCEE---CSBCHHH-------HHHH-CSEECCSSSSSHHHHHHHHHHHH
T ss_pred H---cCCCcEEEEccCCccCC----------CCcc---CCcCHHH-------Hhhh-ccEecCCCCCccHHHHHHHHHHH
Confidence 5 48999999999876432 5543 3552111 1111 23588887887766665555555
Q ss_pred HHHHHHHH
Q psy13054 1112 AENIIRGY 1119 (1128)
Q Consensus 1112 ~~nl~~~l 1119 (1128)
++..++++
T Consensus 276 v~aa~~~~ 283 (288)
T 1b0a_A 276 LQACVEYH 283 (288)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhh
Confidence 55555444
No 175
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=97.66 E-value=7.9e-05 Score=87.47 Aligned_cols=107 Identities=16% Similarity=0.205 Sum_probs=76.4
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc---cChHhh---------------hccCCEEE
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL---VPLDTL---------------CAESDFIF 1015 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~---~~l~el---------------l~~sDvV~ 1015 (1128)
-+|.++-|||+|.+|.++|..|...|.+|++||.+..+.+....+... ..++|+ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 478999999999999999999999999999999876655422222111 133333 35799999
Q ss_pred EecCCCccc--------cccc--CHHHHccCCCCcEEEEcCCCcccCHHHHHHHH
Q psy13054 1016 VTCALTKDT--------EQLI--GRKQFSLMKPTAILVNTSRGGLLDQEALVEFL 1060 (1128)
Q Consensus 1016 l~lPlt~~T--------~~li--~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL 1060 (1128)
+|+|..... ..+. -+...+.|++|+++|+.|.-.+-..+.+.+.+
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 999955422 1233 23566789999999999988877778877764
No 176
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.66 E-value=7.4e-05 Score=83.09 Aligned_cols=131 Identities=16% Similarity=0.171 Sum_probs=89.6
Q ss_pred ccCCCeEEEEEcCh-hhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChH--hhhccCCEEEEecCCCcccccccC
Q psy13054 953 GLKGATVGIVGLGN-IGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLD--TLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 953 ~L~gktvGIIG~G~-IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~--ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
+++||++.|||.|. +|+.+|..|...|++|.+++++.. +++ +.+++||+|+.++|. .++|.
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------~l~l~~~~~~ADIVI~Avg~----p~~I~ 225 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------TEDMIDYLRTADIVIAAMGQ----PGYVK 225 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------HHHHHHHHHTCSEEEECSCC----TTCBC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------CchhhhhhccCCEEEECCCC----CCCCc
Confidence 58999999999998 699999999999999999975432 355 899999999999995 34677
Q ss_pred HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC-CceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHH
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK-KIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKS 1108 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g-~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~ 1108 (1128)
++. +|+|+++|+++.-.+-|.. -++| ++- =||...+ ... ---.+||==||.-.-+..-+.
T Consensus 226 ~~~---vk~GavVIDvgi~~~~~~~-----~~~g~kl~---GDVdf~~-------v~~-~a~~iTPVPGGVGpmT~a~Ll 286 (300)
T 4a26_A 226 GEW---IKEGAAVVDVGTTPVPDPS-----RKDGYRLV---GDVCFEE-------AAA-RAAWISPVPGGVGPMTIAMLL 286 (300)
T ss_dssp GGG---SCTTCEEEECCCEEESCSC-----STTSCEEE---CSBCHHH-------HTT-TCSEEECTTTSSSHHHHHHHH
T ss_pred HHh---cCCCcEEEEEeccCCcCCc-----ccCCceee---cCccHHH-------HHh-hceEeCCCCCcChHHHHHHHH
Confidence 654 5999999999976654321 0011 222 2553211 011 124688877777666655555
Q ss_pred HHHHHHHHHH
Q psy13054 1109 STSAENIIRG 1118 (1128)
Q Consensus 1109 ~~~~~nl~~~ 1118 (1128)
+-+++..+++
T Consensus 287 ~Ntv~aa~~~ 296 (300)
T 4a26_A 287 ENTLEAFKAA 296 (300)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555444443
No 177
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.65 E-value=0.00011 Score=81.06 Aligned_cols=79 Identities=19% Similarity=0.188 Sum_probs=67.3
Q ss_pred ccCCCeEEEEEcCh-hhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 953 GLKGATVGIVGLGN-IGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 953 ~L~gktvGIIG~G~-IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
++.||++.|||.|. +|+++|..|...|++|.+.+++. .+|++.+++||+|+.++|. .++|.++
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------~~L~~~~~~ADIVI~Avg~----p~~I~~~ 221 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------RDLADHVSRADLVVVAAGK----PGLVKGE 221 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHTCSEEEECCCC----TTCBCGG
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------cCHHHHhccCCEEEECCCC----CCCCCHH
Confidence 58999999999987 79999999999999999886533 2688999999999999984 3578775
Q ss_pred HHccCCCCcEEEEcCCCcc
Q psy13054 1032 QFSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~l 1050 (1128)
. +|+|+++|+++.-.+
T Consensus 222 ~---vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 222 W---IKEGAIVIDVGINRQ 237 (286)
T ss_dssp G---SCTTCEEEECCSCSS
T ss_pred H---cCCCeEEEEeccccc
Confidence 5 499999999987664
No 178
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=97.64 E-value=7.2e-05 Score=80.66 Aligned_cols=103 Identities=14% Similarity=0.089 Sum_probs=71.3
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHccC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLM 1036 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~m 1036 (1128)
.+|||||+|.||..+|+.|+..|.+|++|+++ ++ +++|| ++++|.. ....++ .+....+
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~----------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~l 65 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP----------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAFA 65 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECSSG----------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTTC
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH----------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHhc
Confidence 58999999999999999999999999999752 22 57899 8889965 666666 4556678
Q ss_pred CCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECC
Q psy13054 1037 KPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTP 1094 (1128)
Q Consensus 1037 k~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTP 1094 (1128)
++++++|+++ |++ ..+-+..+.+.|. ...+ .||+...+.++.++
T Consensus 66 ~~g~ivvd~s-gs~-~~~vl~~~~~~g~-~fvg-----------~HPm~g~~~~i~a~ 109 (232)
T 3dfu_A 66 RRGQMFLHTS-LTH-GITVMDPLETSGG-IVMS-----------AHPIGQDRWVASAL 109 (232)
T ss_dssp CTTCEEEECC-SSC-CGGGGHHHHHTTC-EEEE-----------EEEEETTEEEEEES
T ss_pred CCCCEEEEEC-CcC-HHHHHHHHHhCCC-cEEE-----------eeeCCCCceeeeCC
Confidence 9999999985 221 1122222223332 2221 36777777776665
No 179
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.64 E-value=0.00011 Score=81.01 Aligned_cols=111 Identities=19% Similarity=0.275 Sum_probs=83.3
Q ss_pred ccCCCeEEEEEcChh-hHHHHHHHhhC--CCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccC
Q psy13054 953 GLKGATVGIVGLGNI-GLETAKLLKAF--KVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 953 ~L~gktvGIIG~G~I-G~~vA~~l~af--G~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
++.||++.|||.|+| |+.+|+.|... |++|.+++++. .++.+.+++||+|+.+++.. ++|.
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t------------~~L~~~~~~ADIVI~Avg~p----~~I~ 218 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT------------RDLPALTRQADIVVAAVGVA----HLLT 218 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC------------SCHHHHHTTCSEEEECSCCT----TCBC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch------------hHHHHHHhhCCEEEECCCCC----cccC
Confidence 589999999999985 99999999999 89999886443 37889999999999999843 3688
Q ss_pred HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHH
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRD 1105 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~ 1105 (1128)
++. +|+|+++|++|.-.+-| | ..=||- ++ ... .--.+||==||.-.-+..
T Consensus 219 ~~~---vk~GavVIDVgi~r~~~----------g----lvGDVd-~~-------v~~-~a~~iTPVPGGVGpmT~a 268 (281)
T 2c2x_A 219 ADM---VRPGAAVIDVGVSRTDD----------G----LVGDVH-PD-------VWE-LAGHVSPNPGGVGPLTRA 268 (281)
T ss_dssp GGG---SCTTCEEEECCEEEETT----------E----EEESBC-GG-------GGG-TCSEEECSSSSSHHHHHH
T ss_pred HHH---cCCCcEEEEccCCCCCC----------C----ccCccc-cc-------hhh-heeeecCCCCCccHHHHH
Confidence 766 48999999999877543 3 334774 21 111 123478877776655543
No 180
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.61 E-value=5.3e-05 Score=80.77 Aligned_cols=106 Identities=18% Similarity=0.212 Sum_probs=72.5
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEE-EeCCCCchh--hhhcCCcc-cChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKIL-YTSRRVKEE--GTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~-~d~~~~~~~--~~~~g~~~-~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
-++|||||+|+||+.+|+.|...|.+|++ +++...+.+ ....+... .+..+.++++|+|++++| ....+.++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp-~~~~~~v~~~- 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVP-YDSIADIVTQ- 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESC-GGGHHHHHTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCC-hHHHHHHHHH-
Confidence 46899999999999999999999999998 776555443 23345543 356677899999999999 3333333321
Q ss_pred HHccCCCCcEEEEcCCCcc-----c-------CHHHHHHHHhcCCc
Q psy13054 1032 QFSLMKPTAILVNTSRGGL-----L-------DQEALVEFLKDKKI 1065 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~l-----V-------de~aL~~aL~~g~i 1065 (1128)
+.. .++.++|+++-|-- . ..+.+.+.+...++
T Consensus 101 -l~~-~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~v 144 (220)
T 4huj_A 101 -VSD-WGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKV 144 (220)
T ss_dssp -CSC-CTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEE
T ss_pred -hhc-cCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCE
Confidence 222 35889999986541 1 35566666654343
No 181
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.61 E-value=9.6e-05 Score=81.88 Aligned_cols=105 Identities=12% Similarity=0.124 Sum_probs=73.3
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchhhhhcCCcc---cChHhhhccCCEEEEecCCC--cccccc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEEGTALGAQL---VPLDTLCAESDFIFVTCALT--KDTEQL 1027 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~~~~~g~~~---~~l~ell~~sDvV~l~lPlt--~~T~~l 1027 (1128)
+.||++.|+|.|.+|++++..|...|+ +|.+++++..+.......... .+++++++++|+|++++|.. ++....
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~ 194 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSV 194 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CCS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcCC
Confidence 689999999999999999999999999 899998776654421112222 24667788999999999964 332223
Q ss_pred cCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1028 IGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1028 i~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
++ .+.++++++++++.-... .+. |+++.++.
T Consensus 195 l~---~~~l~~~~~V~D~vY~P~-~T~-ll~~A~~~ 225 (277)
T 3don_A 195 IS---LNRLASHTLVSDIVYNPY-KTP-ILIEAEQR 225 (277)
T ss_dssp SC---CTTCCSSCEEEESCCSSS-SCH-HHHHHHHT
T ss_pred CC---HHHcCCCCEEEEecCCCC-CCH-HHHHHHHC
Confidence 43 466789999999987744 344 55444443
No 182
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.60 E-value=0.00011 Score=80.45 Aligned_cols=102 Identities=17% Similarity=0.160 Sum_probs=75.9
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh--hhhcC-CcccChHhhhccCCEEEEecCCC--cccccc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE--GTALG-AQLVPLDTLCAESDFIFVTCALT--KDTEQL 1027 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~--~~~~g-~~~~~l~ell~~sDvV~l~lPlt--~~T~~l 1027 (1128)
+.| +++|||.|.+|++++..|...|+ +|.+++++..+.+ ..+.+ ....++.+.++++|+|++++|.. ++ ...
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~-~~~ 184 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGE-ELP 184 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSC-CCS
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCC-CCC
Confidence 578 99999999999999999999999 8999987765543 12222 12346778899999999999964 22 224
Q ss_pred cCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1028 IGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1028 i~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
++.+. ++++.+++++.-+ .+.-|.++.+.|
T Consensus 185 i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 185 VSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 55444 4689999999988 566666666665
No 183
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.59 E-value=0.00015 Score=80.55 Aligned_cols=133 Identities=19% Similarity=0.239 Sum_probs=92.1
Q ss_pred ccCCCeEEEEEcCh-hhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 953 GLKGATVGIVGLGN-IGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 953 ~L~gktvGIIG~G~-IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
+++|+++.|||.|+ +|+.+|+.|...|++|.+++++. .++.+.+++||+|+.+++.. ++|.++
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~p----~~I~~~ 225 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT------------AHLDEEVNKGDILVVATGQP----EMVKGE 225 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCCT----TCBCGG
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc------------ccHHHHhccCCEEEECCCCc----ccCCHH
Confidence 58999999999996 69999999999999999986432 36889999999999999863 468776
Q ss_pred HHccCCCCcEEEEcCCCcccCHHHHHHHHhcC-CceEEEEeccCCCCCCCCCccccCCCeEECCCCCCCcHHHHHHHHHH
Q psy13054 1032 QFSLMKPTAILVNTSRGGLLDQEALVEFLKDK-KIGGAGLDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSST 1110 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g-~i~gaaLDV~e~EPl~~~~pL~~~pNvilTPHiag~t~e~~~~~~~~ 1110 (1128)
. +|+|+++|++|.-.+-|.. -++| ++-| ||-..+ ... ---.+||==||.-.-+..-+.+-
T Consensus 226 ~---vk~GavVIDVgi~~~~d~~-----~~~g~klvG---DVdf~~-------v~~-~a~~iTPVPGGVGpmTiamLl~N 286 (301)
T 1a4i_A 226 W---IKPGAIVIDCGINYVPDDK-----KPNGRKVVG---DVAYDE-------AKE-RASFITPVPGGVGPMTVAMLMQS 286 (301)
T ss_dssp G---SCTTCEEEECCCBC---------------CCBC---SBCHHH-------HTT-TCSEECCSSSSHHHHHHHHHHHH
T ss_pred H---cCCCcEEEEccCCCccccc-----ccCCCeeec---cccHHH-------hhh-hceEeCCCCCCccHHHHHHHHHH
Confidence 6 4799999999987754321 1233 4433 553211 111 12358998888776666656566
Q ss_pred HHHHHHHHHc
Q psy13054 1111 SAENIIRGYK 1120 (1128)
Q Consensus 1111 ~~~nl~~~l~ 1120 (1128)
+++..++++.
T Consensus 287 tv~aa~~~~~ 296 (301)
T 1a4i_A 287 TVESAKRFLE 296 (301)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 6655555553
No 184
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.58 E-value=7e-05 Score=74.41 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=77.5
Q ss_pred cCCCeEEEEEc----ChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc-ChHhhhccCCEEEEecCCCccccccc
Q psy13054 954 LKGATVGIVGL----GNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLI 1028 (1128)
Q Consensus 954 L~gktvGIIG~----G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li 1028 (1128)
+.-++|+|||+ |.+|+.+++.|+..|.+|+.+|+..... .|.+.. +++|+....|++++++| .+....++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i----~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~ 86 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI----EGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA 86 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE----TTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE----CCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH
Confidence 45678999999 9999999999999999988877664221 355544 89999999999999999 67777777
Q ss_pred CHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1029 GRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1029 ~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
.+ .. .++.++++++++. ..+++.+..++..+.-
T Consensus 87 ~~-~~-~~g~~~i~~~~~~----~~~~l~~~a~~~Gi~~ 119 (138)
T 1y81_A 87 KE-AV-EAGFKKLWFQPGA----ESEEIRRFLEKAGVEY 119 (138)
T ss_dssp HH-HH-HTTCCEEEECTTS----CCHHHHHHHHHHTCEE
T ss_pred HH-HH-HcCCCEEEEcCcc----HHHHHHHHHHHCCCEE
Confidence 43 33 4677888887754 2577777777765543
No 185
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.58 E-value=0.00015 Score=81.12 Aligned_cols=107 Identities=17% Similarity=0.138 Sum_probs=76.1
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh--hhhcCC---ccc---ChHhhhccCCEEEEecCCCccc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE--GTALGA---QLV---PLDTLCAESDFIFVTCALTKDT 1024 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~--~~~~g~---~~~---~l~ell~~sDvV~l~lPlt~~T 1024 (1128)
+.|++++|+|.|.+|++++..|...|+ +|.+++++..+.+ ....+. ... ++.+.++++|+|++++|.....
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~ 218 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHP 218 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCC
Confidence 678999999999999999999999998 9999987665543 223332 222 4567789999999999976431
Q ss_pred --cc-ccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCc
Q psy13054 1025 --EQ-LIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKI 1065 (1128)
Q Consensus 1025 --~~-li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i 1065 (1128)
.. .++ .+.+++++++++++-.. ..+. |.+..++..+
T Consensus 219 ~~~~~~i~---~~~l~~~~~v~D~~y~P-~~T~-ll~~A~~~G~ 257 (297)
T 2egg_A 219 RVEVQPLS---LERLRPGVIVSDIIYNP-LETK-WLKEAKARGA 257 (297)
T ss_dssp CCSCCSSC---CTTCCTTCEEEECCCSS-SSCH-HHHHHHHTTC
T ss_pred CCCCCCCC---HHHcCCCCEEEEcCCCC-CCCH-HHHHHHHCcC
Confidence 11 233 34578999999998853 3343 6655555433
No 186
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.55 E-value=7e-05 Score=83.15 Aligned_cols=107 Identities=12% Similarity=0.156 Sum_probs=75.0
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCc-------------ccChHhhhc---cCCEEEEecC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQ-------------LVPLDTLCA---ESDFIFVTCA 1019 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~-------------~~~l~ell~---~sDvV~l~lP 1019 (1128)
++|+|||+|.||..+|..|...|.+|.+||++..+.+ ..+.|.. ..+.+++.+ .+|+|++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 4799999999999999999999999999986554433 2222322 123445554 8999999999
Q ss_pred CCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCce
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIG 1066 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ 1066 (1128)
. +.+..++. +....+++++++|+++.|- -..+.+.+.+...++.
T Consensus 84 ~-~~~~~v~~-~l~~~l~~~~~iv~~~~g~-~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMFK-AIQPMITEKTYVLCLLNGL-GHEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHHH-HHGGGCCTTCEEEECCSSS-CTHHHHTTTSCGGGEE
T ss_pred c-ccHHHHHH-HHHHhcCCCCEEEEecCCC-CcHHHHHHHcCCccEE
Confidence 4 45665553 4556688999999998653 2346666666554443
No 187
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.54 E-value=7.6e-05 Score=83.95 Aligned_cols=102 Identities=11% Similarity=0.075 Sum_probs=72.5
Q ss_pred eEEEEEcChhhHHHHHHHhhCCCEEEEEeC--CCCchh-hhhcCC-----------ccc---ChHhhhccCCEEEEecCC
Q psy13054 958 TVGIVGLGNIGLETAKLLKAFKVSKILYTS--RRVKEE-GTALGA-----------QLV---PLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~afG~~Vi~~d~--~~~~~~-~~~~g~-----------~~~---~l~ell~~sDvV~l~lPl 1020 (1128)
+|+|||+|.||..+|..|...|.+|.+|++ +..+.+ ..+.+. ... ++.+.++.+|+|++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~ 81 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVST 81 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCG
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCCh
Confidence 799999999999999999988999999986 433332 222231 222 566788999999999995
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCCCc---cc-CHHHHHHHHhc
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSRGG---LL-DQEALVEFLKD 1062 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aRG~---lV-de~aL~~aL~~ 1062 (1128)
. .+..++. .... ++++.++|+++.|- -. ..+.+.+.+.+
T Consensus 82 ~-~~~~v~~-~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 82 D-GVLPVMS-RILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp G-GHHHHHH-HHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred H-HHHHHHH-HHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 4 5555553 3445 88899999998775 11 22445566654
No 188
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.54 E-value=8.4e-05 Score=83.68 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=68.4
Q ss_pred ccCCCeEEEEEcChh-hHHHHHHHhhCCCEEEEEeCCCCchh--hhhcC---Ccc--------cChHhhhccCCEEEEec
Q psy13054 953 GLKGATVGIVGLGNI-GLETAKLLKAFKVSKILYTSRRVKEE--GTALG---AQL--------VPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 953 ~L~gktvGIIG~G~I-G~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g---~~~--------~~l~ell~~sDvV~l~l 1018 (1128)
++.|+++.|||.|.| |+.+|+.|.+.|++|.++|++..+.. ....+ ... .++++.+++||+|+.++
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt 253 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV 253 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence 799999999999975 99999999999999999876532211 11111 111 36889999999999999
Q ss_pred CCCcccccc-cCHHHHccCCCCcEEEEcCCCc
Q psy13054 1019 ALTKDTEQL-IGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1019 Plt~~T~~l-i~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
+.. ++ |.++. +|+|+++|++|-..
T Consensus 254 g~p----~~vI~~e~---vk~GavVIDVgi~r 278 (320)
T 1edz_A 254 PSE----NYKFPTEY---IKEGAVCINFACTK 278 (320)
T ss_dssp CCT----TCCBCTTT---SCTTEEEEECSSSC
T ss_pred CCC----cceeCHHH---cCCCeEEEEcCCCc
Confidence 853 34 77665 48999999998753
No 189
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=97.54 E-value=0.00011 Score=85.73 Aligned_cols=103 Identities=14% Similarity=0.159 Sum_probs=76.2
Q ss_pred eEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCC------------------cc-cChHhhhccCCEEEEe
Q psy13054 958 TVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGA------------------QL-VPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~------------------~~-~~l~ell~~sDvV~l~ 1017 (1128)
+|+|||+|.||..+|..|.. |.+|++||....+.+ ..+.+. .. .++.+.++.||+|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvviia 80 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVIIA 80 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEEe
Confidence 79999999999999999998 999999987655433 222222 22 2567888999999999
Q ss_pred cCCCc----------ccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1018 CALTK----------DTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1018 lPlt~----------~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
+|... .+...+ +.... +++++++|+.+.-.+-..+.+.+.+.+.
T Consensus 81 vpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 81 TPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp CCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred cCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 99653 233333 23445 8999999997777776677788777654
No 190
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.52 E-value=0.00017 Score=82.61 Aligned_cols=105 Identities=15% Similarity=0.120 Sum_probs=77.3
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcC--------------Ccc-cChHhhhccCCEEEEec
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALG--------------AQL-VPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g--------------~~~-~~l~ell~~sDvV~l~l 1018 (1128)
..++|+|||.|.+|..+|..|...|.+|.+|+++....+ ..+.+ +.. .++++.++.+|+|++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 456899999999999999999999999999987644332 22211 122 37888999999999999
Q ss_pred CCCcccccccCHHHHccCCCCcEEEEcCCCcccCH----HHHHHHHh
Q psy13054 1019 ALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQ----EALVEFLK 1061 (1128)
Q Consensus 1019 Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde----~aL~~aL~ 1061 (1128)
|. ...+.++ ++....+++++++|+++-|-..++ +-+.+.+.
T Consensus 108 p~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~ 152 (356)
T 3k96_A 108 PS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELG 152 (356)
T ss_dssp CH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHC
T ss_pred CH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcC
Confidence 94 4555555 345567889999999988766653 34445454
No 191
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=97.51 E-value=0.00011 Score=87.43 Aligned_cols=106 Identities=16% Similarity=0.188 Sum_probs=74.0
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhc-------C-------------Ccc-cChHhhhccCCE
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTAL-------G-------------AQL-VPLDTLCAESDF 1013 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~-------g-------------~~~-~~l~ell~~sDv 1013 (1128)
..+|+|||+|.||..+|..|...|.+|++||....+.+ ..+. + +.. .++++.++.||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 35799999999999999999999999999987654433 1111 1 122 256678899999
Q ss_pred EEEecCCC---------cccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhc
Q psy13054 1014 IFVTCALT---------KDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD 1062 (1128)
Q Consensus 1014 V~l~lPlt---------~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~ 1062 (1128)
|++++|.. ...+..+ +.....+++++++|+.|.-.+=..+.+.+.+.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 99999953 2333333 345567899999999984333344445555543
No 192
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.50 E-value=0.00014 Score=86.54 Aligned_cols=103 Identities=20% Similarity=0.203 Sum_probs=76.5
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CC-EEEEEeCCCC----chh-hhh---------------------cC-CcccChHhh
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KV-SKILYTSRRV----KEE-GTA---------------------LG-AQLVPLDTL 1007 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~-~Vi~~d~~~~----~~~-~~~---------------------~g-~~~~~l~el 1007 (1128)
++|+|||+|.+|..+|..|... |. +|++||.... +.+ ..+ .+ ....+-.+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ea 98 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSR 98 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHHH
Confidence 5899999999999999999999 99 9999998776 332 111 11 122222678
Q ss_pred hccCCEEEEecCCCc--------cccccc--CHHHHccCCCCcEEEEcCCCcccCHHHHHHH
Q psy13054 1008 CAESDFIFVTCALTK--------DTEQLI--GRKQFSLMKPTAILVNTSRGGLLDQEALVEF 1059 (1128)
Q Consensus 1008 l~~sDvV~l~lPlt~--------~T~~li--~~~~l~~mk~ga~lIN~aRG~lVde~aL~~a 1059 (1128)
++.||+|++++|... ++..+. -+...+.+++|.++|+.|.-.+-..+.+.+.
T Consensus 99 ~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ 160 (478)
T 3g79_A 99 ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQ 160 (478)
T ss_dssp GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHH
T ss_pred HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHH
Confidence 899999999999653 232333 2356678999999999998887777777753
No 193
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=97.46 E-value=0.0003 Score=83.41 Aligned_cols=115 Identities=15% Similarity=0.160 Sum_probs=76.6
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh-----------cC-----------Cc-ccChHhhhccC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA-----------LG-----------AQ-LVPLDTLCAES 1011 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~-----------~g-----------~~-~~~l~ell~~s 1011 (1128)
-++|||||+|.||..+|..+...|.+|++||......+ ..+ .| .. ..++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 46899999999999999999999999999987654322 111 01 01 1255 568899
Q ss_pred CEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccC
Q psy13054 1012 DFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMI 1074 (1128)
Q Consensus 1012 DvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e 1074 (1128)
|+|+.++|...+.+.-+=++..+.++++++++... .+ +....|.+.++. .-..+++..|.
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snT-s~-~~~~~la~~~~~-~~~~ig~hf~~ 175 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNT-SA-LNVDDIASSTDR-PQLVIGTHFFS 175 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC-SS-SCHHHHHTTSSC-GGGEEEEEECS
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCC-CC-cCHHHHHHHhcC-CcceEEeecCC
Confidence 99999999765433322234556789999998633 33 344567666543 22345566663
No 194
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.44 E-value=7.9e-05 Score=74.60 Aligned_cols=104 Identities=13% Similarity=0.102 Sum_probs=77.4
Q ss_pred CCeEEEEEc----ChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc-ChHhhhccCCEEEEecCCCcccccccCH
Q psy13054 956 GATVGIVGL----GNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 956 gktvGIIG~----G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
-++|+|||+ |++|..+++.|+..|++|+.+|+...-.. -.|.+.. +++|+....|++++++| .+....++.+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~--i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~~ 89 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT--LLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQE 89 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE--ETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc--cCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHHH
Confidence 578999999 89999999999999999887776541011 1355543 79999999999999999 5777777742
Q ss_pred HHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1031 KQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1031 ~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
.. ....++++++++.- ++++.+.+++..+...
T Consensus 90 -~~-~~g~~~i~i~~~~~----~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 90 -AI-AIGAKTLWLQLGVI----NEQAAVLAREAGLSVV 121 (145)
T ss_dssp -HH-HHTCCEEECCTTCC----CHHHHHHHHTTTCEEE
T ss_pred -HH-HcCCCEEEEcCChH----HHHHHHHHHHcCCEEE
Confidence 33 36677888876422 6788888887766543
No 195
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.43 E-value=0.00011 Score=83.36 Aligned_cols=87 Identities=15% Similarity=0.200 Sum_probs=65.9
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcC-----------Ccc-cChHhhhccCCEEEEecCCCc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALG-----------AQL-VPLDTLCAESDFIFVTCALTK 1022 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g-----------~~~-~~l~ell~~sDvV~l~lPlt~ 1022 (1128)
..+|+|||+|.||..+|..|...|.+|.+|+++..+.+ ..+.+ +.. .++++ +..+|+|++++| ++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk-~~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIP-VQ 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSC-GG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECC-HH
Confidence 35799999999999999999999999999987654433 22323 233 36778 899999999999 46
Q ss_pred ccccccCHHHHccCC-CCcEEEEcCCCc
Q psy13054 1023 DTEQLIGRKQFSLMK-PTAILVNTSRGG 1049 (1128)
Q Consensus 1023 ~T~~li~~~~l~~mk-~ga~lIN~aRG~ 1049 (1128)
.++.++. .++ ++.++|+++-|-
T Consensus 92 ~~~~v~~-----~l~~~~~~vv~~~nGi 114 (335)
T 1z82_A 92 YIREHLL-----RLPVKPSMVLNLSKGI 114 (335)
T ss_dssp GHHHHHT-----TCSSCCSEEEECCCCC
T ss_pred HHHHHHH-----HhCcCCCEEEEEeCCC
Confidence 6665543 233 789999998773
No 196
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=97.43 E-value=0.00018 Score=79.00 Aligned_cols=90 Identities=14% Similarity=0.078 Sum_probs=66.5
Q ss_pred eEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhc---CC----c-ccChHhhhccCCEEEEecCCCccccccc
Q psy13054 958 TVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTAL---GA----Q-LVPLDTLCAESDFIFVTCALTKDTEQLI 1028 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~---g~----~-~~~l~ell~~sDvV~l~lPlt~~T~~li 1028 (1128)
+|+|||+|.||..+|..|...|.+|.+|++...+.. .... +. . ..+..+.++.+|+|++++|.. .+..++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v~ 80 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDAV 80 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHHH
Confidence 799999999999999999999999999987665432 1111 11 0 123356778999999999965 455555
Q ss_pred CHHHHccCCCCcEEEEcCCCc
Q psy13054 1029 GRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1029 ~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
++....+++++++|++.-|-
T Consensus 81 -~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 81 -KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp -HHHHTTSCTTSCEEEECSSS
T ss_pred -HHHHhhCCCCCEEEEecCCC
Confidence 34556788999999986653
No 197
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=97.43 E-value=0.00021 Score=89.24 Aligned_cols=114 Identities=13% Similarity=0.108 Sum_probs=78.5
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhh------------hhcC-------------Ccc-cChHhhhcc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEG------------TALG-------------AQL-VPLDTLCAE 1010 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~------------~~~g-------------~~~-~~l~ell~~ 1010 (1128)
++|||||+|.||..+|..+...|.+|++||......+. .+.| ++. .++ +.+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 393 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGN 393 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGG
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHCC
Confidence 57999999999999999999999999999976543321 1122 112 245 67899
Q ss_pred CCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccC
Q psy13054 1011 SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMI 1074 (1128)
Q Consensus 1011 sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e 1074 (1128)
||+|+.++|...+.+.-+=++..+.++++++++..+.+ +....+.+.++. .-...++..|.
T Consensus 394 aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-~~~~ig~hf~~ 454 (715)
T 1wdk_A 394 VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALKR-PENFVGMHFFN 454 (715)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCSC-GGGEEEEECCS
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhcC-ccceEEEEccC
Confidence 99999999988766543334566778999999844333 334456655532 22345666665
No 198
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.42 E-value=7.8e-05 Score=76.66 Aligned_cols=93 Identities=13% Similarity=0.187 Sum_probs=67.6
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhC-CCEEEEEeCCCCchh-hhhcCCccc-----C---hHhh--hccCCEEEEecCC
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAF-KVSKILYTSRRVKEE-GTALGAQLV-----P---LDTL--CAESDFIFVTCAL 1020 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~af-G~~Vi~~d~~~~~~~-~~~~g~~~~-----~---l~el--l~~sDvV~l~lPl 1020 (1128)
++.+++++|+|+|.+|+.+|+.|+.. |.+|+++|+...+.. ..+.|+... + +.++ +.++|+|++++|.
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 57788999999999999999999999 999999997765443 334454322 2 3444 6789999999997
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
.+.+..++ ..+..+.+...+|..+.
T Consensus 116 ~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 116 HQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp HHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred hHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 65554443 35666776667765433
No 199
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.40 E-value=0.00026 Score=81.92 Aligned_cols=95 Identities=22% Similarity=0.252 Sum_probs=77.1
Q ss_pred cccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCC-----ch--hhhhcCCcccChHhhhccCCEEEEecCCCccc
Q psy13054 952 MGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRV-----KE--EGTALGAQLVPLDTLCAESDFIFVTCALTKDT 1024 (1128)
Q Consensus 952 ~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~-----~~--~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T 1024 (1128)
.-|.||||+|||||.=|.+=|..|+--|++|++--+... +. .+.+.|++..+.+|+.++||+|.+.+|...+.
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~q~ 112 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHS 112 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGGHH
T ss_pred HHHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhhHH
Confidence 368999999999999999999999999999887643111 11 25677888889999999999999999965443
Q ss_pred ccccCHHHHccCCCCcEEEEcCCCc
Q psy13054 1025 EQLIGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1025 ~~li~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
.++ ++....||+|+.|. .|+|=
T Consensus 113 -~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 113 -DVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp -HHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred -HHH-HHHHhhCCCCCEEE-ecCcc
Confidence 355 46999999999987 56775
No 200
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=97.39 E-value=0.00015 Score=82.52 Aligned_cols=93 Identities=15% Similarity=0.119 Sum_probs=69.4
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCC-------CEEEEEeCCCC-----chh-hhhc--------------CCcc-cChHhh
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFK-------VSKILYTSRRV-----KEE-GTAL--------------GAQL-VPLDTL 1007 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG-------~~Vi~~d~~~~-----~~~-~~~~--------------g~~~-~~l~el 1007 (1128)
.++|+|||+|.||..+|..|...| .+|.+|+++.. ..+ .... ++.. .+++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 358999999999999999998878 89999987665 322 1111 1222 367888
Q ss_pred hccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcc
Q psy13054 1008 CAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1008 l~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~l 1050 (1128)
++.+|+|++++|. ..++.++. +....+++++++|+++.|-.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~~-~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKICD-QLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHHH-HHTTCSCTTCEEEECCCCBC
T ss_pred HcCCCEEEEeCCH-HHHHHHHH-HHHhhCCCCCEEEEECCccC
Confidence 9999999999994 45555552 44456789999999988754
No 201
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.35 E-value=0.00021 Score=76.89 Aligned_cols=96 Identities=20% Similarity=0.246 Sum_probs=71.6
Q ss_pred eEEEEEcChhhHHHHHHHhhCCCEE-EEEeCCCCchhhhhcCCcccChHhhh-ccCCEEEEecCCCcccccccCHHHHcc
Q psy13054 958 TVGIVGLGNIGLETAKLLKAFKVSK-ILYTSRRVKEEGTALGAQLVPLDTLC-AESDFIFVTCALTKDTEQLIGRKQFSL 1035 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~afG~~V-i~~d~~~~~~~~~~~g~~~~~l~ell-~~sDvV~l~lPlt~~T~~li~~~~l~~ 1035 (1128)
+|||||+|.||+.+++.+..-|+++ .+||+. .+.. . .+.++++++ .++|+|++++|.. ... +-....
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~-~~~~--~---~~~~~~~l~~~~~DvVv~~~~~~-~~~----~~~~~~ 70 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR-GEHE--K---MVRGIDEFLQREMDVAVEAASQQ-AVK----DYAEKI 70 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS-CCCT--T---EESSHHHHTTSCCSEEEECSCHH-HHH----HHHHHH
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC-cchh--h---hcCCHHHHhcCCCCEEEECCCHH-HHH----HHHHHH
Confidence 7999999999999999998889997 467654 3221 1 345899999 7999999999943 221 223456
Q ss_pred CCCCcEEEEcCCCcccCH---HHHHHHHhcCC
Q psy13054 1036 MKPTAILVNTSRGGLLDQ---EALVEFLKDKK 1064 (1128)
Q Consensus 1036 mk~ga~lIN~aRG~lVde---~aL~~aL~~g~ 1064 (1128)
++.|..+|..+-+..-+. +.|.++.++..
T Consensus 71 l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g 102 (236)
T 2dc1_A 71 LKAGIDLIVLSTGAFADRDFLSRVREVCRKTG 102 (236)
T ss_dssp HHTTCEEEESCGGGGGSHHHHHHHHHHHHHHC
T ss_pred HHCCCcEEEECcccCChHHHHHHHHHHHHhcC
Confidence 788999999998887766 56777766533
No 202
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.34 E-value=0.00012 Score=84.12 Aligned_cols=91 Identities=11% Similarity=0.147 Sum_probs=67.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhCC-------CEEEEEeCCCC-----chh-hhhc--------------CCcc-cChHhhh
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFK-------VSKILYTSRRV-----KEE-GTAL--------------GAQL-VPLDTLC 1008 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG-------~~Vi~~d~~~~-----~~~-~~~~--------------g~~~-~~l~ell 1008 (1128)
++|+|||.|.||..+|..|...| .+|.+|+++.. ..+ ..+. ++.. .++++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998777 89999987655 332 1111 1222 2677889
Q ss_pred ccCCEEEEecCCCcccccccCHHHHc----cCCCCcEEEEcCCCc
Q psy13054 1009 AESDFIFVTCALTKDTEQLIGRKQFS----LMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1009 ~~sDvV~l~lPlt~~T~~li~~~~l~----~mk~ga~lIN~aRG~ 1049 (1128)
+.+|+|++++| ....+.++. +... .+++++++|+++.|-
T Consensus 102 ~~aDvVilav~-~~~~~~vl~-~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 102 NDADLLIFIVP-CQYLESVLA-SIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp TTCSEEEECCC-HHHHHHHHH-HHTC---CCCCTTCEEEECCCSC
T ss_pred cCCCEEEEcCC-HHHHHHHHH-HHhhhhhccCCCCCEEEEeCCcc
Confidence 99999999999 456665553 3334 678899999998873
No 203
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.31 E-value=0.00024 Score=84.06 Aligned_cols=48 Identities=25% Similarity=0.356 Sum_probs=42.5
Q ss_pred cCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCC
Q psy13054 307 LGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRG 358 (1128)
Q Consensus 307 ~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG 358 (1128)
.++...+++++++.+|+|+.+ ..+.++|+.+.|+.||++++++|+||+
T Consensus 307 ~g~dv~~lee~~~~aDvVi~a----tG~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 307 EGLQVLTLEDVVSEADIFVTT----TGNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp TTCEECCGGGTTTTCSEEEEC----SSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred hCCccCCHHHHHHhcCEEEeC----CCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 455667899999999999963 578899999999999999999999998
No 204
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.29 E-value=5.2e-05 Score=86.86 Aligned_cols=93 Identities=9% Similarity=0.077 Sum_probs=68.9
Q ss_pred eEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcC--------------Ccc-cChHhhhccCCEEEEecCCC
Q psy13054 958 TVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALG--------------AQL-VPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g--------------~~~-~~l~ell~~sDvV~l~lPlt 1021 (1128)
+|+|||+|.||..+|..|...|.+|.+||++..+.+ ..+.+ +.. .+++++++.+|+|++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 899999999999999999999999999987654333 22211 222 3678889999999999994
Q ss_pred cccccccCHH---HHccCCC-CcEEEEcCCCccc
Q psy13054 1022 KDTEQLIGRK---QFSLMKP-TAILVNTSRGGLL 1051 (1128)
Q Consensus 1022 ~~T~~li~~~---~l~~mk~-ga~lIN~aRG~lV 1051 (1128)
..++.++... ....+++ ++++|+++.|-..
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~ 129 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER 129 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence 5566555331 4445678 9999999877544
No 205
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.27 E-value=0.00011 Score=84.68 Aligned_cols=50 Identities=16% Similarity=0.325 Sum_probs=42.9
Q ss_pred CHHHHhhcCCEEEEec--CCCcccccccCHHHHhcCCCCcEEEEec--CCCccCH
Q psy13054 313 PLDTLCAESDFIFVTC--ALTKDTEQLIGRKQFSLMKPTAILINTS--RGGLLDQ 363 (1128)
Q Consensus 313 sLdeLl~~SDiVslh~--PLT~~T~~lIn~~~l~~MK~gaiLINta--RG~lVDe 363 (1128)
++++++++||+|+.++ |. ..+.++|+++.++.||||+++||+| +|+.+..
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~ 311 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNCEL 311 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHHHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCcccc
Confidence 5789999999998764 53 3477899999999999999999998 8888774
No 206
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=97.22 E-value=0.00059 Score=85.27 Aligned_cols=114 Identities=18% Similarity=0.118 Sum_probs=77.1
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hh-----------hcC-------------Ccc-cChHhhhcc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GT-----------ALG-------------AQL-VPLDTLCAE 1010 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~-----------~~g-------------~~~-~~l~ell~~ 1010 (1128)
++|||||.|.||..+|..+...|.+|++||......+ .. +.| ++. .++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 6899999999999999999999999999997654332 10 112 111 245 57899
Q ss_pred CCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccC
Q psy13054 1011 SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMI 1074 (1128)
Q Consensus 1011 sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e 1074 (1128)
||+|+.++|...+.+.-+=++..+.++++++++..+.+ +....+.+.++. .-...++..|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-p~~~iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKS-QDRIVGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSC-TTTEEEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcC-CCCEEEecCCC
Confidence 99999999987765443334566788999999644333 333455555532 22345666665
No 207
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.19 E-value=0.00051 Score=68.78 Aligned_cols=95 Identities=14% Similarity=0.081 Sum_probs=64.9
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hh-hcCCccc-----C---hHhh-hccCCEEEEecCCC
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GT-ALGAQLV-----P---LDTL-CAESDFIFVTCALT 1021 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~-~~g~~~~-----~---l~el-l~~sDvV~l~lPlt 1021 (1128)
...+++|.|+|+|.+|+.+++.|+..|.+|++++++..+.. .. ..+.... + +.+. +..+|+|++++|..
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 46788999999999999999999999999999997765544 23 3444321 1 2333 67899999999954
Q ss_pred cccccccCHHHHccCCCCcEEEEcCCCc
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
..+.-+ ......+.+...+|-..++.
T Consensus 96 ~~~~~~--~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 96 STNFFI--SMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp HHHHHH--HHHHHHTSCCSEEEEECSSG
T ss_pred HHHHHH--HHHHHHHCCCCeEEEEECCH
Confidence 433222 23444455666666666655
No 208
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.16 E-value=0.00016 Score=83.88 Aligned_cols=51 Identities=22% Similarity=0.427 Sum_probs=43.4
Q ss_pred CHHHHhhcCCEEEEec--CCCcccccccCHHHHhcCCCCcEEEEec--CCCccCHH
Q psy13054 313 PLDTLCAESDFIFVTC--ALTKDTEQLIGRKQFSLMKPTAILINTS--RGGLLDQE 364 (1128)
Q Consensus 313 sLdeLl~~SDiVslh~--PLT~~T~~lIn~~~l~~MK~gaiLINta--RG~lVDe~ 364 (1128)
+|++++++||+|+.++ |.. .+.++|+++.++.||||+++||+| +|+.++..
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t 322 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGA 322 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTC
T ss_pred HHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCcccc
Confidence 6899999999998653 432 478999999999999999999999 99988653
No 209
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.10 E-value=0.00021 Score=78.22 Aligned_cols=77 Identities=16% Similarity=0.147 Sum_probs=59.4
Q ss_pred CCeEEEEEcccccCccchHHHHHcCCeEEecCCCchHhHHHHHHHHHHHHHHhhhhhhhhhhcCccccccccccCCccCC
Q psy13054 619 KNLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMG 698 (1128)
Q Consensus 619 p~Lk~I~~~g~G~D~iD~~~a~~~gI~v~n~pg~~~~aVAE~ai~llLa~~R~i~~~~~~~r~G~W~~~~~~~~~~~~~~ 698 (1128)
+.|.-++...-|+|.|+. +.| +.+|+|++. .+++.++.|. +.+
T Consensus 72 ~~l~~~a~~~gavn~i~~----~~g----~~~g~ntd~-----~g~~~~l~~~------------------------~~~ 114 (263)
T 2d5c_A 72 DWVSPEAQRIGAVNTVLQ----VEG----RLFGFNTDA-----PGFLEALKAG------------------------GIP 114 (263)
T ss_dssp SEECHHHHHHTCCCEEEE----ETT----EEEEECCHH-----HHHHHHHHHT------------------------TCC
T ss_pred HHHhHHHHHhCCCCcEEc----cCC----eEEEeCCCH-----HHHHHHHHHh------------------------CCC
Confidence 678888888899999976 334 446777765 3555555431 235
Q ss_pred CCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 699 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 699 l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
++| ++||||+|.+|+.+|+.+..+|+++.+|++.
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 789 9999999999999999999999988888864
No 210
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.07 E-value=0.0016 Score=73.35 Aligned_cols=88 Identities=18% Similarity=0.277 Sum_probs=66.6
Q ss_pred CCCeEEEEEcChhhHHHHHHHhh-CC-CEEEEEeCCCCchh-hhh----cCCc--ccChHhhhccCCEEEEecCCCcccc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKA-FK-VSKILYTSRRVKEE-GTA----LGAQ--LVPLDTLCAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~a-fG-~~Vi~~d~~~~~~~-~~~----~g~~--~~~l~ell~~sDvV~l~lPlt~~T~ 1025 (1128)
..++++|||.|.+|+.+++.+.. ++ -+|.+||++ .... ..+ .|+. ..++++++++||+|++|+|.. .
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~---~ 195 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRST---T 195 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCS---S
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCC---C
Confidence 45789999999999999999875 34 478899877 3333 221 3542 348999999999999999964 3
Q ss_pred cccCHHHHccCCCCcEEEEcCCCc
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
-++.. +.++||+.++.+|...
T Consensus 196 pvl~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 196 PLFAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp CSSCG---GGCCTTCEEEECCCSS
T ss_pred cccCH---HHcCCCcEEEECCCCC
Confidence 46664 4689999999998653
No 211
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.01 E-value=0.0006 Score=75.65 Aligned_cols=106 Identities=18% Similarity=0.131 Sum_probs=72.8
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh--hhhcC----CcccChHhhhccCCEEEEecCCCcccc-
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE--GTALG----AQLVPLDTLCAESDFIFVTCALTKDTE- 1025 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~--~~~~g----~~~~~l~ell~~sDvV~l~lPlt~~T~- 1025 (1128)
+.||++.|+|.|.+|++++..|...|+ +|.++++...+.+ +.+.+ +...+++++.+++|+|++++|..-...
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~~ 203 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGEL 203 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC----
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCCC
Confidence 789999999999999999999999996 8999987665543 22222 334467777789999999999764321
Q ss_pred cccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
-.++. +.++++++++++.-.. ..+.-|..|-+.|
T Consensus 204 ~~l~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 237 (281)
T 3o8q_A 204 PAIDP---VIFSSRSVCYDMMYGK-GYTVFNQWARQHG 237 (281)
T ss_dssp CSCCG---GGEEEEEEEEESCCCS-SCCHHHHHHHHTT
T ss_pred CCCCH---HHhCcCCEEEEecCCC-ccCHHHHHHHHCC
Confidence 12443 3456788888887654 3444333343333
No 212
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.01 E-value=0.00042 Score=68.27 Aligned_cols=89 Identities=12% Similarity=0.207 Sum_probs=63.4
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-----C---hHhh-hccCCEEEEecCCCcccc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-----P---LDTL-CAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-----~---l~el-l~~sDvV~l~lPlt~~T~ 1025 (1128)
..++.|+|+|.+|+.+|+.|+..|.+|+++|....+.+ ..+.|+... + |.++ +.++|+|++++|...++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 35799999999999999999999999999998766544 344555432 1 2221 568999999999776665
Q ss_pred cccCHHHHccCCCCcEEEEcC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~a 1046 (1128)
.++ ..+..+.++..+|-..
T Consensus 87 ~~~--~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIARA 105 (140)
T ss_dssp HHH--HHHHHHCSSSEEEEEE
T ss_pred HHH--HHHHHHCCCCeEEEEE
Confidence 443 3455566666666443
No 213
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.00 E-value=0.00043 Score=78.37 Aligned_cols=108 Identities=15% Similarity=0.143 Sum_probs=76.1
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCc-------------c-cChHhhhccCCEEEEecCC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQ-------------L-VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~-------------~-~~l~ell~~sDvV~l~lPl 1020 (1128)
.++|+|||.|.||..+|..|...|.+|.++++. +..+ ..+.|.. . .++++ +..+|+|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 468999999999999999999999999999863 3222 3333332 1 25566 5899999999995
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCCCc------------------ccCHHHHHHHHhcCCceE
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSRGG------------------LLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aRG~------------------lVde~aL~~aL~~g~i~g 1067 (1128)
..++.++. +.-..+++++++|.+.-|= +-.++.+.+.+...++.+
T Consensus 81 -~~~~~~~~-~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~ 143 (335)
T 3ghy_A 81 -PALESVAA-GIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLG 143 (335)
T ss_dssp -HHHHHHHG-GGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEE
T ss_pred -hhHHHHHH-HHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEE
Confidence 56665553 3334567899999998882 223456777776556533
No 214
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.99 E-value=0.00027 Score=79.11 Aligned_cols=69 Identities=12% Similarity=0.104 Sum_probs=58.8
Q ss_pred CCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCee
Q psy13054 308 GAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIG 376 (1128)
Q Consensus 308 g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~Ia 376 (1128)
|+... +++|++++||+|++++|-...++.+++.+.+..+++|.++||++.....+..++.+.+++..+.
T Consensus 52 g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~ 121 (306)
T 3l6d_A 52 GAHLCESVKAALSASPATIFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH 121 (306)
T ss_dssp TCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE
T ss_pred CCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 55443 8999999999999999987778888875567888999999999999999999999999876543
No 215
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.99 E-value=0.00066 Score=74.81 Aligned_cols=69 Identities=16% Similarity=0.115 Sum_probs=51.6
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--hhhcC----CcccChHhhhc-cCCEEEEecCCCc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--GTALG----AQLVPLDTLCA-ESDFIFVTCALTK 1022 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g----~~~~~l~ell~-~sDvV~l~lPlt~ 1022 (1128)
+.+++++|+|.|.+|++++..|...|.+|.+++++.++.. ....+ +...+++++.+ ++|+|++++|...
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 6789999999999999999999999999999987765543 22211 22235555544 8999999999654
No 216
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=96.99 E-value=0.00013 Score=80.37 Aligned_cols=86 Identities=15% Similarity=0.072 Sum_probs=55.9
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEE-EEeCCCCchh-h-hhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKI-LYTSRRVKEE-G-TALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQF 1033 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi-~~d~~~~~~~-~-~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l 1033 (1128)
.+|||||+|+||+.+++.|... .+|+ +||+...+.. . ...+....+++++++++|+|++++|... .. +.+
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~-~~-----~v~ 75 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-IK-----TVA 75 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-HH-----HHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHH-HH-----HHH
Confidence 3699999999999999999776 7884 7876554433 2 2345422367888899999999999653 22 344
Q ss_pred ccC-CCCcEEEEcCCCc
Q psy13054 1034 SLM-KPTAILVNTSRGG 1049 (1128)
Q Consensus 1034 ~~m-k~ga~lIN~aRG~ 1049 (1128)
..+ +++.++||++-+-
T Consensus 76 ~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 76 NHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp TTTCCSSCCEEECCSSS
T ss_pred HHhccCCCEEEECCCCC
Confidence 444 6899999998553
No 217
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.97 E-value=0.00032 Score=78.13 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=71.0
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-----C-CEEEEEeCCCCchh-hhh-cCCccc--------------ChHhhhccCCEE
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-----K-VSKILYTSRRVKEE-GTA-LGAQLV--------------PLDTLCAESDFI 1014 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-----G-~~Vi~~d~~~~~~~-~~~-~g~~~~--------------~l~ell~~sDvV 1014 (1128)
.+|+|||+|.||..+|..|... | .+|.+|++ ..+.+ ..+ .|+... +..+.+..+|+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 87 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYI 87 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEE
Confidence 4799999999999999999887 8 89999986 33222 333 344322 334567899999
Q ss_pred EEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCH-HHHHHHHhcCC
Q psy13054 1015 FVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQ-EALVEFLKDKK 1064 (1128)
Q Consensus 1015 ~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde-~aL~~aL~~g~ 1064 (1128)
++++|... +..++ +.....++++.++|.+.-| ++. +.+.+.+...+
T Consensus 88 il~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG--~~~~~~l~~~l~~~~ 134 (317)
T 2qyt_A 88 LFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG--ADIAERMRTYLPDTV 134 (317)
T ss_dssp EECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS--SSHHHHHTTTSCTTT
T ss_pred EEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC--CCcHHHHHHHCCCCc
Confidence 99999553 45454 2344456788999998776 343 55656564433
No 218
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=96.95 E-value=0.0013 Score=75.09 Aligned_cols=90 Identities=13% Similarity=0.160 Sum_probs=66.6
Q ss_pred CCCeEEEEEcChhhHHHHHHHh-hCC-CEEEEEeCCCCchh--hhhc----CC--c-ccChHhhhccCCEEEEecCCCcc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLK-AFK-VSKILYTSRRVKEE--GTAL----GA--Q-LVPLDTLCAESDFIFVTCALTKD 1023 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~-afG-~~Vi~~d~~~~~~~--~~~~----g~--~-~~~l~ell~~sDvV~l~lPlt~~ 1023 (1128)
..+++||||.|.+|+.+++.+. ..+ -+|.+||+...+.+ .... ++ . ..+++++++++|+|++++|.. .
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~-~ 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADK-A 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCS-S
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCC-C
Confidence 4578999999999999998774 344 47888887665544 2222 43 2 247899999999999999976 2
Q ss_pred cccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1024 TEQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1024 T~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
...++.. +.+++|..++.++..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 3446654 467899999999864
No 219
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.94 E-value=0.0019 Score=71.00 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=64.5
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--hhhcC----CcccChHhhh-ccCCEEEEecCCCccccc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--GTALG----AQLVPLDTLC-AESDFIFVTCALTKDTEQ 1026 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g----~~~~~l~ell-~~sDvV~l~lPlt~~T~~ 1026 (1128)
+.|+++.|+|.|.+|+++++.|...|.+|++++++..+.. ....+ +...+++++. .++|+|++++|..... .
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~-~ 195 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG-D 195 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGT-C
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCC-C
Confidence 6789999999999999999999999999999987655433 22221 1223445554 5899999999965431 1
Q ss_pred c--cCHHHHccCCCCcEEEEcCCCc
Q psy13054 1027 L--IGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1027 l--i~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
+ ++.+ .++++.+++++.-..
T Consensus 196 ~~~i~~~---~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 196 IPAIPSS---LIHPGIYCYDMFYQK 217 (271)
T ss_dssp CCCCCGG---GCCTTCEEEESCCCS
T ss_pred CCCCCHH---HcCCCCEEEEeccCC
Confidence 1 3322 246788888887654
No 220
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.90 E-value=0.00059 Score=75.93 Aligned_cols=68 Identities=21% Similarity=0.236 Sum_probs=57.3
Q ss_pred cCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCee
Q psy13054 307 LGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIG 376 (1128)
Q Consensus 307 ~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~Ia 376 (1128)
.|++.. +++|+++ ||+|++++|-.+.++..+ ++.++.++++.++||++.........+.+.+++..+.
T Consensus 57 ~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 125 (296)
T 3qha_A 57 AGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIH 125 (296)
T ss_dssp TTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE
T ss_pred CCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE
Confidence 355554 8999999 999999999877778777 6777889999999999999988889999999875443
No 221
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.89 E-value=0.00054 Score=78.67 Aligned_cols=36 Identities=25% Similarity=0.377 Sum_probs=33.9
Q ss_pred CCCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 698 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 698 ~l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
++.||||+|+|+|+||+.+|++|..+|++|+++|+.
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 589999999999999999999999999999988864
No 222
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.87 E-value=0.0023 Score=70.62 Aligned_cols=107 Identities=10% Similarity=0.044 Sum_probs=71.4
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh--hhhcC---CcccChHhhh-ccCCEEEEecCCCcccc
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE--GTALG---AQLVPLDTLC-AESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~--~~~~g---~~~~~l~ell-~~sDvV~l~lPlt~~T~ 1025 (1128)
.+.||++.|+|.|.+|++++..|...|+ +|.++++...+.+ +.+.+ +...+++++- .++|+|+++.|..-...
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~~ 196 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTAD 196 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGTC
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCCC
Confidence 3789999999999999999999999996 8989987665543 22222 2334566654 78999999999653211
Q ss_pred -cccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1026 -QLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1026 -~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
-.++. +.++++.+++++.-.. ..+.-|.+|-+.|
T Consensus 197 ~~~i~~---~~l~~~~~V~DlvY~P-~~T~ll~~A~~~G 231 (272)
T 3pwz_A 197 LPPLPA---DVLGEAALAYELAYGK-GLTPFLRLAREQG 231 (272)
T ss_dssp CCCCCG---GGGTTCSEEEESSCSC-CSCHHHHHHHHHS
T ss_pred CCCCCH---HHhCcCCEEEEeecCC-CCCHHHHHHHHCC
Confidence 12343 3456777777776553 3344333444443
No 223
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=96.86 E-value=0.00088 Score=77.30 Aligned_cols=83 Identities=17% Similarity=0.273 Sum_probs=68.9
Q ss_pred CCCeEEEEEc-ChhhHHHHHHHhhCCC---EEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCH
Q psy13054 955 KGATVGIVGL-GNIGLETAKLLKAFKV---SKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 955 ~gktvGIIG~-G~IG~~vA~~l~afG~---~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
..-+|.|||. |..|+.-++.++++|+ .|.++|.+.... |.. + +.++++|+|+.++......-.+|++
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~-----g~~---~-~~i~~aDivIn~vlig~~aP~Lvt~ 283 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSR-----GGP---F-DEIPQADIFINCIYLSKPIAPFTNM 283 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTT-----CSC---C-THHHHSSEEEECCCCCSSCCCSCCH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccccc-----CCc---h-hhHhhCCEEEECcCcCCCCCcccCH
Confidence 4567999999 9999999999999998 899998553111 222 2 3466999999999987777789999
Q ss_pred HHHccC-CCCcEEEEcC
Q psy13054 1031 KQFSLM-KPTAILVNTS 1046 (1128)
Q Consensus 1031 ~~l~~m-k~ga~lIN~a 1046 (1128)
+.++.| |||+++|++|
T Consensus 284 e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 284 EKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp HHHCCTTCCCCEEEETT
T ss_pred HHHhcCcCCCeEEEEEe
Confidence 999999 9999999996
No 224
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.83 E-value=0.001 Score=62.24 Aligned_cols=66 Identities=20% Similarity=0.173 Sum_probs=50.3
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCC-CEEEEEeCCCCchh-hhhcCCcc--------cChHhhhccCCEEEEecCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFK-VSKILYTSRRVKEE-GTALGAQL--------VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG-~~Vi~~d~~~~~~~-~~~~g~~~--------~~l~ell~~sDvV~l~lPl 1020 (1128)
.+++|+|+|.|.||+.+++.|...| .+|+++++...+.. ....++.. .++.++++.+|+|+.++|.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF 79 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence 4578999999999999999999999 89999987655433 22233322 1356778899999999874
No 225
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.83 E-value=0.0012 Score=74.13 Aligned_cols=103 Identities=19% Similarity=0.261 Sum_probs=70.5
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCC-------------cc-cChHhhhccCCEEEEec
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGA-------------QL-VPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~-------------~~-~~l~ell~~sDvV~l~l 1018 (1128)
...++|+|||.|.||..+|..|...|.+|.+| .+....+ ..+.|. .. .++++ ++.+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 45678999999999999999999999999999 5544332 222222 11 24444 58999999999
Q ss_pred CCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHh
Q psy13054 1019 ALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLK 1061 (1128)
Q Consensus 1019 Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~ 1061 (1128)
|.. .++.++ ++.-..+++++++|.+.-|=- .++.+.+.+.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~-~~~~l~~~~~ 134 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNGVE-NADTLRSLLE 134 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSSSS-HHHHHHHHCC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCCCC-cHHHHHHHcC
Confidence 965 666555 234456788999999977732 2345666664
No 226
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.82 E-value=0.0007 Score=77.86 Aligned_cols=107 Identities=16% Similarity=0.019 Sum_probs=72.0
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh-cCCc------ccChHhhhccCCEEEEecCCCccc
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA-LGAQ------LVPLDTLCAESDFIFVTCALTKDT 1024 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~-~g~~------~~~l~ell~~sDvV~l~lPlt~~T 1024 (1128)
+-++++|+|||+|.||+.+++.|... .+|.++|++..+.. ..+ .+.. ..+++++++++|+|++++|.....
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~ 91 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGF 91 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHH
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhH
Confidence 45789999999999999999999877 89999987765544 111 1101 135788999999999998844221
Q ss_pred ccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCce
Q psy13054 1025 EQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIG 1066 (1128)
Q Consensus 1025 ~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ 1066 (1128)
.+ ..+.++.|..+++++-- .-+..+|.+..++..+.
T Consensus 92 -~v----~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~~ 127 (365)
T 2z2v_A 92 -KS----IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQVT 127 (365)
T ss_dssp -HH----HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTCE
T ss_pred -HH----HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCCE
Confidence 11 23456788889998752 33445666666555443
No 227
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.81 E-value=0.0019 Score=62.31 Aligned_cols=88 Identities=14% Similarity=0.148 Sum_probs=58.6
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hh-hcCCccc-----ChHh----hhccCCEEEEecCCCccc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GT-ALGAQLV-----PLDT----LCAESDFIFVTCALTKDT 1024 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~-~~g~~~~-----~l~e----ll~~sDvV~l~lPlt~~T 1024 (1128)
+++++|+|+|.+|+.+++.|...|.+|+++|++..... .. ..++... +.+. .+.++|+|++++|....+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57899999999999999999999999999987654433 22 2244321 2222 267899999999864332
Q ss_pred ccccCHHHHccCCCCcEEEEc
Q psy13054 1025 EQLIGRKQFSLMKPTAILVNT 1045 (1128)
Q Consensus 1025 ~~li~~~~l~~mk~ga~lIN~ 1045 (1128)
. .-......++++.+++-+
T Consensus 84 ~--~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 L--MSSLLAKSYGINKTIARI 102 (140)
T ss_dssp H--HHHHHHHHTTCCCEEEEC
T ss_pred H--HHHHHHHHcCCCEEEEEe
Confidence 2 112345557777666544
No 228
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.81 E-value=0.0023 Score=71.94 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=75.1
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCC---------------cc-cChHhhhccCCEEEEecCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGA---------------QL-VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~---------------~~-~~l~ell~~sDvV~l~lPl 1020 (1128)
++|+|||.|.||..+|..|...|.+|.++++.. .....+.|. .. .+++++.+.+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 579999999999999999999999999998754 222222221 11 2566776789999999995
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
. .+..++ +..-..++++.++|.+.-|= -.++.+.+.+...++.+
T Consensus 82 ~-~~~~~l-~~l~~~l~~~t~Iv~~~nGi-~~~~~l~~~~~~~~vl~ 125 (320)
T 3i83_A 82 V-EGADRV-GLLRDAVAPDTGIVLISNGI-DIEPEVAAAFPDNEVIS 125 (320)
T ss_dssp C-TTCCHH-HHHTTSCCTTCEEEEECSSS-SCSHHHHHHSTTSCEEE
T ss_pred C-ChHHHH-HHHHhhcCCCCEEEEeCCCC-ChHHHHHHHCCCCcEEE
Confidence 4 344444 23445678899999988763 33567777776655433
No 229
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.79 E-value=0.0028 Score=74.46 Aligned_cols=136 Identities=18% Similarity=0.186 Sum_probs=85.8
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhh--------------------cC-Ccc-cChHhhhccCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTA--------------------LG-AQL-VPLDTLCAESD 1012 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~--------------------~g-~~~-~~l~ell~~sD 1012 (1128)
+-++|+|||+|.+|..+|..+...|.+|++||....+-+.-. .| .+. .+.++.++.||
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 456899999999999999999999999999997654322111 11 122 25778899999
Q ss_pred EEEEecCCCcccccccC--------HHHHccC---CCCcEEEEcCCCcccCHHHHHH-HHhcCCceEEEEe-ccCCCCCC
Q psy13054 1013 FIFVTCALTKDTEQLIG--------RKQFSLM---KPTAILVNTSRGGLLDQEALVE-FLKDKKIGGAGLD-VMIPEPLP 1079 (1128)
Q Consensus 1013 vV~l~lPlt~~T~~li~--------~~~l~~m---k~ga~lIN~aRG~lVde~aL~~-aL~~g~i~gaaLD-V~e~EPl~ 1079 (1128)
++++|+|......+-.| +..-+.| .++.++|.-|.-.+=.++.+.. .|++.. .+.-.+ ++-+|-+.
T Consensus 100 ~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~~~PErl~ 178 (444)
T 3vtf_A 100 ATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVASNPEFLR 178 (444)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEEECCCCCC
T ss_pred ceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceeecCccccc
Confidence 99999983222222122 1122334 3688999988888766666544 343322 121122 25678776
Q ss_pred CCCc---cccCCCeE
Q psy13054 1080 ADHP---LVQLDNCV 1091 (1128)
Q Consensus 1080 ~~~p---L~~~pNvi 1091 (1128)
+.+. +...|.|+
T Consensus 179 eG~a~~d~~~~~riV 193 (444)
T 3vtf_A 179 EGSALEDFFKPDRIV 193 (444)
T ss_dssp TTSHHHHHHSCSCEE
T ss_pred CCccccccccCCcEE
Confidence 6654 34456665
No 230
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.77 E-value=0.00041 Score=78.20 Aligned_cols=69 Identities=12% Similarity=0.111 Sum_probs=58.0
Q ss_pred CCccc-CHHHHhhcCCEEEEecCCCcccccccCH-HHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCee
Q psy13054 308 GAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGR-KQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIG 376 (1128)
Q Consensus 308 g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~-~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~Ia 376 (1128)
|++.. +++|++++||+|++++|-...++.++.. ..++.++++.++|+++.+...+...+.+.+++..+.
T Consensus 74 g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 144 (320)
T 4dll_A 74 GATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIA 144 (320)
T ss_dssp TCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE
Confidence 55544 8999999999999999977777777654 566789999999999999999999999999886553
No 231
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.76 E-value=0.0012 Score=63.93 Aligned_cols=94 Identities=12% Similarity=0.143 Sum_probs=59.8
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc-----cC---hHhh-hccCCEEEEecCCCcc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL-----VP---LDTL-CAESDFIFVTCALTKD 1023 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~-----~~---l~el-l~~sDvV~l~lPlt~~ 1023 (1128)
+.++++.|+|+|.+|+.+++.|...|.+|+++|+...+.. ..+.+... .+ ++++ +.++|+|++++|...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 5678899999999999999999999999999987554332 22223321 12 2333 6789999999986422
Q ss_pred cccccCHHHHccCCCCcEEEEcCCCc
Q psy13054 1024 TEQLIGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1024 T~~li~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
+. +.-......+.+. .+|-.+.+.
T Consensus 84 ~~-~~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 84 AS-TLTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp HH-HHHHHHHHHTTCS-EEEEECCSH
T ss_pred HH-HHHHHHHHHcCCC-eEEEEeCCH
Confidence 21 1222344556665 555554443
No 232
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.72 E-value=0.0038 Score=69.84 Aligned_cols=107 Identities=19% Similarity=0.194 Sum_probs=73.8
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCc--------------c-cChHhhhccCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQ--------------L-VPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~--------------~-~~l~ell~~sDvV~l~lPlt 1021 (1128)
++|+|||.|.||..+|..|...|.+|.++++.. .....+.|.. . .+.++ +..+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~ 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTF 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCC
Confidence 579999999999999999999999999998754 2223333321 1 13444 67999999999944
Q ss_pred cccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
.++.++. ..-..+++++++|.+.-|= -.++.|.+.+...++.++
T Consensus 81 -~~~~~l~-~l~~~l~~~~~iv~l~nGi-~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 81 -ANSRYEE-LIRPLVEEGTQILTLQNGL-GNEEALATLFGAERIIGG 124 (312)
T ss_dssp -GGGGHHH-HHGGGCCTTCEEEECCSSS-SHHHHHHHHTCGGGEEEE
T ss_pred -CcHHHHH-HHHhhcCCCCEEEEecCCC-CcHHHHHHHCCCCcEEEE
Confidence 4444442 3344678899999998772 225667777766565443
No 233
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.70 E-value=0.0014 Score=71.89 Aligned_cols=106 Identities=12% Similarity=0.146 Sum_probs=69.1
Q ss_pred cCHHHHhh-cCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCC---C
Q psy13054 312 VPLDTLCA-ESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPE---P 387 (1128)
Q Consensus 312 vsLdeLl~-~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~E---P 387 (1128)
.+++++++ .||+|++++|.. .+..++. +....|+++.++++++.+.....+++.+.+.++.+.+ .-++..| |
T Consensus 53 ~~~~~~~~~~aDvVilavp~~-~~~~v~~-~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp 128 (281)
T 2g5c_A 53 TSIAKVEDFSPDFVMLSSPVR-TFREIAK-KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGV 128 (281)
T ss_dssp SCGGGGGGTCCSEEEECSCHH-HHHHHHH-HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSG
T ss_pred CCHHHHhcCCCCEEEEcCCHH-HHHHHHH-HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCCh
Confidence 37889999 999999999965 5556664 3456789999999999988766788888887652221 2334333 2
Q ss_pred CCCCCCcccCCCCCCCCcccccccCCCCChhhhHHHHHHHHHH
Q psy13054 388 LPADHPLVQLDNCGGAGLDVMIPEPLPADHPLVQLDNCEEFFE 430 (1128)
Q Consensus 388 l~~~~pL~~lpNvg~~~~~v~tph~~~~t~~~~~~~n~~~~~~ 430 (1128)
....++++.-+++ +++||.+... -..+.+..+|+
T Consensus 129 ~~a~~~l~~g~~~------~~~~~~~~~~---~~~~~v~~l~~ 162 (281)
T 2g5c_A 129 EYSLDNLYEGKKV------ILTPTKKTDK---KRLKLVKRVWE 162 (281)
T ss_dssp GGCCSSTTTTCEE------EECCCSSSCH---HHHHHHHHHHH
T ss_pred hhhhhHHhCCCCE------EEecCCCCCH---HHHHHHHHHHH
Confidence 2233455565556 7788765442 22344455454
No 234
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.69 E-value=0.0032 Score=73.95 Aligned_cols=84 Identities=24% Similarity=0.375 Sum_probs=60.8
Q ss_pred ccCCCeEEEEEcC---hh-------hHHHHHHHhhCCCEEEEEeCCCCchhhhhc--CCccc-ChHhhhccCCEEEEecC
Q psy13054 953 GLKGATVGIVGLG---NI-------GLETAKLLKAFKVSKILYTSRRVKEEGTAL--GAQLV-PLDTLCAESDFIFVTCA 1019 (1128)
Q Consensus 953 ~L~gktvGIIG~G---~I-------G~~vA~~l~afG~~Vi~~d~~~~~~~~~~~--g~~~~-~l~ell~~sDvV~l~lP 1019 (1128)
.+.|++|+|+|+. ++ ...+++.|+..|++|.+|||.......... .+.++ +++++++.+|.|+++.+
T Consensus 330 ~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t~ 409 (444)
T 3vtf_A 330 GLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIATA 409 (444)
T ss_dssp CCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECSC
T ss_pred ccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEccC
Confidence 5899999999986 22 788999999999999999997644322222 34444 78999999999999887
Q ss_pred CCcccccccCHHHHccCCCCcEEEEc
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPTAILVNT 1045 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~ga~lIN~ 1045 (1128)
-. +-+.+ | + ++.+++++
T Consensus 410 h~-ef~~l-d------~-~~~vv~D~ 426 (444)
T 3vtf_A 410 WP-QYEGL-D------Y-RGKVVVDG 426 (444)
T ss_dssp CG-GGGGS-C------C-TTCEEEES
T ss_pred CH-HHhCC-C------c-CCCEEEEC
Confidence 43 33322 2 2 35677774
No 235
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=96.66 E-value=0.0048 Score=68.49 Aligned_cols=77 Identities=22% Similarity=0.312 Sum_probs=64.3
Q ss_pred ccCCCeEEEEEcCh-hhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 953 GLKGATVGIVGLGN-IGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 953 ~L~gktvGIIG~G~-IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
++.||++.|||-++ +|+++|.+|..-++.|.++.++.. +|.+..++||||+.++.-. ++|.++
T Consensus 176 ~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~------------dl~~~~~~ADIvV~A~G~p----~~i~~d 239 (303)
T 4b4u_A 176 EIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQ------------NLPELVKQADIIVGAVGKA----ELIQKD 239 (303)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS------------SHHHHHHTCSEEEECSCST----TCBCGG
T ss_pred CCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCC------------CHHHHhhcCCeEEeccCCC----Cccccc
Confidence 58999999999975 599999999999999988865432 6889999999999887643 578765
Q ss_pred HHccCCCCcEEEEcCCC
Q psy13054 1032 QFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG 1048 (1128)
..|+|+++|++|--
T Consensus 240 ---~vk~GavVIDVGin 253 (303)
T 4b4u_A 240 ---WIKQGAVVVDAGFH 253 (303)
T ss_dssp ---GSCTTCEEEECCCB
T ss_pred ---cccCCCEEEEecee
Confidence 46899999999853
No 236
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=96.64 E-value=0.0026 Score=71.79 Aligned_cols=86 Identities=14% Similarity=0.211 Sum_probs=63.6
Q ss_pred CCCeEEEEEcChhhHHHHHHHhh-CC-CEEEEEeCCCCchh--hhhc-----CCcccChHhhhccCCEEEEecCCCcccc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKA-FK-VSKILYTSRRVKEE--GTAL-----GAQLVPLDTLCAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~a-fG-~~Vi~~d~~~~~~~--~~~~-----g~~~~~l~ell~~sDvV~l~lPlt~~T~ 1025 (1128)
..+++||||.|.+|+.+++.+.. .+ -+|.+||++..+.+ .... .+...++++++ ++|+|++++|...
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~~--- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSRK--- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCSS---
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCCC---
Confidence 45789999999999999998876 33 57888887665544 2221 12334788999 9999999999642
Q ss_pred cccCHHHHccCCCCcEEEEcCC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
.++.. +.+++|..+++++.
T Consensus 200 pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 200 PVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp CCBCG---GGCCTTCEEEECSC
T ss_pred ceecH---HHcCCCeEEEECCC
Confidence 45653 46789999999953
No 237
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.63 E-value=0.0015 Score=63.89 Aligned_cols=87 Identities=15% Similarity=0.058 Sum_probs=56.6
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-----C---hHhh-hccCCEEEEecCCCccc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-----P---LDTL-CAESDFIFVTCALTKDT 1024 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-----~---l~el-l~~sDvV~l~lPlt~~T 1024 (1128)
.++++.|+|+|.+|+.+|+.|...|.+|+++|....+.. ..+.+.... + +.++ +.++|+|++++|..+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 457899999999999999999999999999997665443 333444321 2 2222 46799999999843332
Q ss_pred ccccCHHHHccCCCCcEEE
Q psy13054 1025 EQLIGRKQFSLMKPTAILV 1043 (1128)
Q Consensus 1025 ~~li~~~~l~~mk~ga~lI 1043 (1128)
+.-......+....+++
T Consensus 85 --~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 85 --LKILKALRSVSDVYAIV 101 (141)
T ss_dssp --HHHHHHHHHHCCCCEEE
T ss_pred --HHHHHHHHHhCCceEEE
Confidence 33334444455333443
No 238
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.62 E-value=0.0061 Score=70.05 Aligned_cols=93 Identities=14% Similarity=0.188 Sum_probs=74.6
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCC----CCch---------h-hhhcCC--cccChHhhhccCCEEE
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSR----RVKE---------E-GTALGA--QLVPLDTLCAESDFIF 1015 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~----~~~~---------~-~~~~g~--~~~~l~ell~~sDvV~ 1015 (1128)
.+.+.+|.|+|.|..|..+|+.|.+.|. +|+++|+. ..+. . +...+. ...+|.|.++.+|+++
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlI 268 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFI 268 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEE
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEE
Confidence 4788999999999999999999999999 89999987 4332 1 111111 1347999999999998
Q ss_pred EecCCCcccccccCHHHHccCCCCcEEEEcCCCcc
Q psy13054 1016 VTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1016 l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~l 1050 (1128)
-+.. -++|+++.++.|+++++++.+|+...
T Consensus 269 G~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 269 GVSR-----GNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp ECSC-----SSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred EeCC-----CCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 6632 38999999999999999999998664
No 239
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.61 E-value=0.0009 Score=73.91 Aligned_cols=68 Identities=10% Similarity=-0.013 Sum_probs=56.2
Q ss_pred CCccc-CHHHHhhcCCEEEEecCCCccccccc--CHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCe
Q psy13054 308 GAQLV-PLDTLCAESDFIFVTCALTKDTEQLI--GRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKI 375 (1128)
Q Consensus 308 g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lI--n~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~I 375 (1128)
|++.. +++|+++.||+|++++|-...++..+ +++.++.+++|.++||++.....+...+.+.+++..+
T Consensus 44 g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pef_A 44 GAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGG 114 (287)
T ss_dssp TCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 55544 89999999999999999777777766 2455678999999999999998888999999987544
No 240
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.59 E-value=0.00074 Score=74.59 Aligned_cols=68 Identities=13% Similarity=0.068 Sum_probs=55.8
Q ss_pred CCccc-CHHHHhhcCCEEEEecCCCccccccc--CHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCe
Q psy13054 308 GAQLV-PLDTLCAESDFIFVTCALTKDTEQLI--GRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKI 375 (1128)
Q Consensus 308 g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lI--n~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~I 375 (1128)
|++.. +++|+++.||+|++++|-.+.++.++ .+..++.++++.++||++.+...+...+.+.+++..+
T Consensus 44 g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pdu_A 44 GARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGG 114 (287)
T ss_dssp TCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 55544 89999999999999999776777665 2455678999999999999998888899998887544
No 241
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.58 E-value=0.00099 Score=74.62 Aligned_cols=69 Identities=9% Similarity=-0.005 Sum_probs=56.1
Q ss_pred cCCccc-CHHHHhhcCCEEEEecCCCccccccc--CHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCe
Q psy13054 307 LGAQLV-PLDTLCAESDFIFVTCALTKDTEQLI--GRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKI 375 (1128)
Q Consensus 307 ~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lI--n~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~I 375 (1128)
.|++.. +++|+++.||+|++++|-...++.++ .+..+..+++|.++||++....-....+.+.+++..+
T Consensus 63 ~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 134 (310)
T 3doj_A 63 HGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGG 134 (310)
T ss_dssp TTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 455544 89999999999999999777777665 2455678999999999999988888899998887544
No 242
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.52 E-value=0.0041 Score=61.68 Aligned_cols=104 Identities=15% Similarity=0.177 Sum_probs=72.9
Q ss_pred CCCeEEEEEc----ChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc-ChHhhhccCCEEEEecCCCcccccccC
Q psy13054 955 KGATVGIVGL----GNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 955 ~gktvGIIG~----G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
.-++|+|||+ |++|..+++.|+..|++|+..++.....+ -.|.... +++|+-...|++++++|. +....+++
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~--i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~ 88 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEE--LFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP 88 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSE--ETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCc--CCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH
Confidence 3578999999 89999999999999998666654411111 1355543 799998899999999996 67777774
Q ss_pred HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
+..+ ...++++++.+-. ++++.+..++..+.-
T Consensus 89 -~~~~-~gi~~i~~~~g~~----~~~~~~~a~~~Gir~ 120 (140)
T 1iuk_A 89 -EVLA-LRPGLVWLQSGIR----HPEFEKALKEAGIPV 120 (140)
T ss_dssp -HHHH-HCCSCEEECTTCC----CHHHHHHHHHTTCCE
T ss_pred -HHHH-cCCCEEEEcCCcC----HHHHHHHHHHcCCEE
Confidence 3333 4445676665432 577777777765543
No 243
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.45 E-value=0.0023 Score=73.32 Aligned_cols=77 Identities=10% Similarity=0.214 Sum_probs=63.7
Q ss_pred CCccc-CHHHHhhcC---CEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecC
Q psy13054 308 GAQLV-PLDTLCAES---DFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVM 383 (1128)
Q Consensus 308 g~~~v-sLdeLl~~S---DiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVf 383 (1128)
|+... +++|+++.+ |+|++++|-. .++.++ ...+..+++|.++|+++.+...+...+.+.+++..+......|+
T Consensus 65 g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVs 142 (358)
T 4e21_A 65 GIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML-QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTS 142 (358)
T ss_dssp TCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH-HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred CCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH-HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCC
Confidence 45444 899999999 9999999977 777777 56678899999999999999999999999999887766555565
Q ss_pred CCC
Q psy13054 384 IPE 386 (1128)
Q Consensus 384 e~E 386 (1128)
-.+
T Consensus 143 Gg~ 145 (358)
T 4e21_A 143 GGI 145 (358)
T ss_dssp CGG
T ss_pred CCH
Confidence 543
No 244
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.40 E-value=0.0071 Score=67.05 Aligned_cols=104 Identities=12% Similarity=0.048 Sum_probs=69.1
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchhhhhcCCccc---ChHhhhccCCEEEEecCCC--cccc-c
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEEGTALGAQLV---PLDTLCAESDFIFVTCALT--KDTE-Q 1026 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~~~~~g~~~~---~l~ell~~sDvV~l~lPlt--~~T~-~ 1026 (1128)
+.|+++.|+|.|.+|++++..|...|+ +|.++++...+.+.....+... ++++ + ++|+|+++.|.. +++. -
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~~ 197 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGES 197 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTCC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCccC
Confidence 689999999999999999999999999 8999987665543211122222 3444 4 899999999963 2211 1
Q ss_pred ccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1027 LIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1027 li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
.++.+.| +++.+++++.-... .+.=|..|-+.|
T Consensus 198 pi~~~~l---~~~~~v~DlvY~P~-~T~ll~~A~~~G 230 (282)
T 3fbt_A 198 PVDKEVV---AKFSSAVDLIYNPV-ETLFLKYARESG 230 (282)
T ss_dssp SSCHHHH---TTCSEEEESCCSSS-SCHHHHHHHHTT
T ss_pred CCCHHHc---CCCCEEEEEeeCCC-CCHHHHHHHHCc
Confidence 2454443 57888888865542 344444444444
No 245
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.39 E-value=0.0035 Score=70.50 Aligned_cols=67 Identities=12% Similarity=-0.001 Sum_probs=55.5
Q ss_pred cCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCee
Q psy13054 307 LGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIG 376 (1128)
Q Consensus 307 ~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~Ia 376 (1128)
.|+ .. +++|++++||+|++++|-......+ .+.+..++++.++|+++.........+.+.+++..+.
T Consensus 74 ~g~-~~~s~~e~~~~aDvVi~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~ 141 (317)
T 4ezb_A 74 LGV-EPLDDVAGIACADVVLSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGS 141 (317)
T ss_dssp TTC-EEESSGGGGGGCSEEEECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCE
T ss_pred CCC-CCCCHHHHHhcCCEEEEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 355 56 8999999999999999977666654 6667889999999999998888899999999875443
No 246
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.37 E-value=0.0042 Score=68.77 Aligned_cols=103 Identities=17% Similarity=0.150 Sum_probs=69.7
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--hhhcC----------CcccChHhhhccCCEEEEecCCC
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--GTALG----------AQLVPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g----------~~~~~l~ell~~sDvV~l~lPlt 1021 (1128)
+.||++.|+|.|.||+++|+.|...| +|++++++..+.+ ..+.+ ....++.+.+.++|+|++++|..
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~ 204 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIG 204 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTT
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCC
Confidence 67899999999999999999999999 9999986654432 11111 11123456778999999999965
Q ss_pred cccc--c-cc-CHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhc
Q psy13054 1022 KDTE--Q-LI-GRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD 1062 (1128)
Q Consensus 1022 ~~T~--~-li-~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~ 1062 (1128)
.... . .+ + .+.++++++++++.-.. ..+. |.+..++
T Consensus 205 ~~~~~~~~~~~~---~~~l~~~~~v~Dv~y~p-~~t~-ll~~a~~ 244 (287)
T 1nvt_A 205 MYPNIDVEPIVK---AEKLREDMVVMDLIYNP-LETV-LLKEAKK 244 (287)
T ss_dssp CTTCCSSCCSSC---STTCCSSSEEEECCCSS-SSCH-HHHHHHT
T ss_pred CCCCCCCCCCCC---HHHcCCCCEEEEeeeCC-ccCH-HHHHHHH
Confidence 4211 0 12 2 35678899999998643 3333 4444443
No 247
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.37 E-value=0.0058 Score=60.83 Aligned_cols=102 Identities=10% Similarity=0.009 Sum_probs=72.7
Q ss_pred CCeEEEEEc----ChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc-cChHhhhccCCEEEEecCCCcccccccCH
Q psy13054 956 GATVGIVGL----GNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 956 gktvGIIG~----G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~-~~l~ell~~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
-++|+|||. |++|..+++.|+..|.+|+..++.. .+. .|... .+++|+....|++++++|. +....+++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~--~~i--~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~- 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY--EEV--LGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE- 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC--SEE--TTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH-
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCC--CeE--CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH-
Confidence 688999999 7999999999999999876665543 211 35544 3799998899999999995 66666663
Q ss_pred HHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1031 KQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1031 ~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
+..+ ...++++++.+- .++.+.+..++..+.-.
T Consensus 96 ~~~~-~gi~~i~~~~g~----~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 96 QAIK-KGAKVVWFQYNT----YNREASKKADEAGLIIV 128 (144)
T ss_dssp HHHH-HTCSEEEECTTC----CCHHHHHHHHHTTCEEE
T ss_pred HHHH-cCCCEEEECCCc----hHHHHHHHHHHcCCEEE
Confidence 2333 344566665432 36778888887665543
No 248
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.25 E-value=0.023 Score=63.45 Aligned_cols=93 Identities=19% Similarity=0.273 Sum_probs=67.5
Q ss_pred ccCCCeEEEEEcC---hhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCc-------
Q psy13054 953 GLKGATVGIVGLG---NIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTK------- 1022 (1128)
Q Consensus 953 ~L~gktvGIIG~G---~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~------- 1022 (1128)
.+.|++|++||=| ++.+..+..+..||++|.+..|..-.++....| ...+++|.++.+|||..-.-..+
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~g-~~~d~~eav~~aDvvyt~~~q~er~~~~~~ 222 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEENTFG-TYVSMDEAVESSDVVMLLRIQNERHQSAVS 222 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTCSSC-EECCHHHHHHHCSEEEECCCCTTTCCSSCC
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcchhhcC-ccCCHHHHhCCCCEEEeccchhhccccchh
Confidence 3789999999975 699999999999999998887643333222223 34589999999999987421111
Q ss_pred --c--cccccCHHHHccCCCCcEEEEcC
Q psy13054 1023 --D--TEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1023 --~--T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
+ ...-++.+.++.+|++++|.-+.
T Consensus 223 ~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 223 QEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp STTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred HHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 1 12346888999999999887764
No 249
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.21 E-value=0.0081 Score=66.61 Aligned_cols=107 Identities=13% Similarity=0.063 Sum_probs=69.1
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh--hhhcC-------Ccc---cChHhhhccCCEEEEecC
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE--GTALG-------AQL---VPLDTLCAESDFIFVTCA 1019 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~--~~~~g-------~~~---~~l~ell~~sDvV~l~lP 1019 (1128)
.+.||++.|+|.|.+|++++..|...|+ +|.++++...+.+ ..+.+ +.. .++++.++++|+|+++.|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence 3789999999999999999999999999 6988887665543 11111 111 267788899999999999
Q ss_pred CCcccc--cccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1020 LTKDTE--QLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1020 lt~~T~--~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
..-... -.++ .+.++++.+++++.-.. ..+.=|.+|-+.|
T Consensus 204 ~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P-~~T~ll~~A~~~G 245 (283)
T 3jyo_A 204 MGMPAHPGTAFD---VSCLTKDHWVGDVVYMP-IETELLKAARALG 245 (283)
T ss_dssp TTSTTSCSCSSC---GGGCCTTCEEEECCCSS-SSCHHHHHHHHHT
T ss_pred CCCCCCCCCCCC---HHHhCCCCEEEEecCCC-CCCHHHHHHHHCc
Confidence 642111 1233 23455666666665443 2333333443433
No 250
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.19 E-value=0.0038 Score=70.30 Aligned_cols=65 Identities=20% Similarity=0.310 Sum_probs=51.0
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEEE-EeCCCCchh--hhhcCCcccChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKIL-YTSRRVKEE--GTALGAQLVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi~-~d~~~~~~~--~~~~g~~~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+..++.++.. ++++++ +|+...+.. ....++.+.+++++++ +.|+|++++|..
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~ 74 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPTD 74 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCGG
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCch
Confidence 4799999999999999999876 788774 665444333 3455666668999998 899999999954
No 251
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.17 E-value=0.0045 Score=69.57 Aligned_cols=112 Identities=13% Similarity=0.172 Sum_probs=73.1
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchhhh--h-----------cCCcc-cChHhhhccCCEEEEecCC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEEGT--A-----------LGAQL-VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~~~--~-----------~g~~~-~~l~ell~~sDvV~l~lPl 1020 (1128)
.++|+|||.|.||..+|..|...|. +|++||....+.+.. + ..+.. .++ +.++.||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 3689999999999999999988888 999999776543311 0 01222 356 778999999999942
Q ss_pred Cc-----------ccccccC--HHHHccCCCCcEEEEcCCCcccCHHHHHHHHh--cCCceEE
Q psy13054 1021 TK-----------DTEQLIG--RKQFSLMKPTAILVNTSRGGLLDQEALVEFLK--DKKIGGA 1068 (1128)
Q Consensus 1021 t~-----------~T~~li~--~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~--~g~i~ga 1068 (1128)
.. ++..++. .+.++...|++++|+.+-..-+....+.+... ..++.|.
T Consensus 83 p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~ 145 (317)
T 2ewd_A 83 PGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQKVSGLPHNKVCGM 145 (317)
T ss_dssp SSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred CCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHhhCCCHHHEEec
Confidence 11 1111110 01233345799999999877666667766652 2345554
No 252
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.16 E-value=0.0021 Score=71.40 Aligned_cols=66 Identities=11% Similarity=0.159 Sum_probs=54.8
Q ss_pred CCccc-CHHHHhhcCCEEEEecCCCcccccccCH--HHHhcCCCCcEEEEecCCCccCHHHHHHHHHcC
Q psy13054 308 GAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGR--KQFSLMKPTAILINTSRGGLLDQEALVEFLKDK 373 (1128)
Q Consensus 308 g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~--~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG 373 (1128)
|++.. +++|++++||+|++++|-...++.++.. +.++.++++.++||++.+.....+.+.+.+++.
T Consensus 46 g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~ 114 (302)
T 2h78_A 46 GASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARER 114 (302)
T ss_dssp TCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred CCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHc
Confidence 55543 8999999999999999977777776642 556789999999999999988888999999874
No 253
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.15 E-value=0.0011 Score=73.83 Aligned_cols=64 Identities=14% Similarity=0.158 Sum_probs=53.4
Q ss_pred cCHHHHhhcCCEEEEecCCCcccccccC--HHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCe
Q psy13054 312 VPLDTLCAESDFIFVTCALTKDTEQLIG--RKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKI 375 (1128)
Q Consensus 312 vsLdeLl~~SDiVslh~PLT~~T~~lIn--~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~I 375 (1128)
.+++|+++.||+|++++|-....+.++. ++.++.++++.++||++.........+.+.+++..+
T Consensus 56 ~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 121 (303)
T 3g0o_A 56 ASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL 121 (303)
T ss_dssp SSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 4899999999999999997767776653 445678999999999999988888899999987544
No 254
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.08 E-value=0.011 Score=66.64 Aligned_cols=134 Identities=22% Similarity=0.115 Sum_probs=88.7
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-h-----------hhcC--------------Ccc-cChHhhh
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-G-----------TALG--------------AQL-VPLDTLC 1008 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~-----------~~~g--------------~~~-~~l~ell 1008 (1128)
-.+|+|||.|.||+.+|..+...|++|++||....... . .+.+ ++. .++++.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 46899999999999999999999999999997654211 0 0011 111 3678899
Q ss_pred ccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCC
Q psy13054 1009 AESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLD 1088 (1128)
Q Consensus 1009 ~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~p 1088 (1128)
+.||+|+=++|.+-+.+.=+=++.=+.++++++|-....+ +....|.++++. +=...++=.|-+-| --||..
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffNP~~---~m~LVE-- 157 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVNPPY---YIPLVE-- 157 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECSSTT---TCCEEE--
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCCCcc---ccchHH--
Confidence 9999999999988887765445566677999988655544 455677776643 22344444443322 123433
Q ss_pred CeEECCCCCC
Q psy13054 1089 NCVLTPHTSS 1098 (1128)
Q Consensus 1089 NvilTPHiag 1098 (1128)
|+-+|+.+-
T Consensus 158 -iv~g~~Ts~ 166 (319)
T 3ado_A 158 -LVPHPETSP 166 (319)
T ss_dssp -EEECTTCCH
T ss_pred -hcCCCCCcH
Confidence 566665443
No 255
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.05 E-value=0.0046 Score=69.19 Aligned_cols=105 Identities=18% Similarity=0.229 Sum_probs=68.2
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc----------Ch-HhhhccCCEEEEecCCCccc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV----------PL-DTLCAESDFIFVTCALTKDT 1024 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~----------~l-~ell~~sDvV~l~lPlt~~T 1024 (1128)
.+|+|||.|.||..+|..|. -|.+|.++++.....+ ..+.|.... +. ++....+|+|++++|. ..+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~-~~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQ-HQL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCG-GGH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCH-HHH
Confidence 57999999999999999999 8999999986544332 333343321 11 3467789999999994 344
Q ss_pred ccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1025 EQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1025 ~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
..++ +.++.+.++. +|.+.-|=-. ++.|.+.+...++.+
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi~~-~e~l~~~~~~~~vl~ 119 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGMGH-IHDLKDWHVGHSIYV 119 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSSHH-HHHHHTCCCSCEEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCccH-HHHHHHhCCCCcEEE
Confidence 4444 3444455667 8888777432 334444444444433
No 256
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.05 E-value=0.011 Score=65.99 Aligned_cols=105 Identities=25% Similarity=0.313 Sum_probs=68.2
Q ss_pred CeEEEEEcChhhHH-HHHHHhhC-CCEEE-EEeCCCCchh--hhhcCCcc-cChHhhhccCCEEEEecCCCcccccccCH
Q psy13054 957 ATVGIVGLGNIGLE-TAKLLKAF-KVSKI-LYTSRRVKEE--GTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 957 ktvGIIG~G~IG~~-vA~~l~af-G~~Vi-~~d~~~~~~~--~~~~g~~~-~~l~ell~~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
.+|||||+|.||+. +++.++.. +++++ ++|+...+.. ....|+.. .+++++..+.|+|++++|..... +
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~-----~ 80 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHF-----D 80 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHH-----H
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHH-----H
Confidence 47999999999997 88888654 77877 6776665543 33445543 46777767899999999944221 1
Q ss_pred HHHccCCCCc-EEEEc-CCCcccCHHHHHHHHhcCCce
Q psy13054 1031 KQFSLMKPTA-ILVNT-SRGGLLDQEALVEFLKDKKIG 1066 (1128)
Q Consensus 1031 ~~l~~mk~ga-~lIN~-aRG~lVde~aL~~aL~~g~i~ 1066 (1128)
-..+.++.|. +++.- .-..+-+.+.|.++.++..+.
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 118 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLT 118 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 2233455565 56552 223344566788877765543
No 257
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=96.04 E-value=0.0043 Score=69.39 Aligned_cols=97 Identities=19% Similarity=0.143 Sum_probs=62.6
Q ss_pred CeEEEEEcChhhHHHHHHHhhCC--CEEEEEeCCCCchh--hhhc---------CCcc--cChHhhhccCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFK--VSKILYTSRRVKEE--GTAL---------GAQL--VPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG--~~Vi~~d~~~~~~~--~~~~---------g~~~--~~l~ell~~sDvV~l~lPlt 1021 (1128)
++|+|||.|.||..+|..|...| .+|++||....+.. ..+. .+.. .++ +.++.||+|++++|..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 47999999999999999998778 68999987654332 1111 1222 356 7789999999999964
Q ss_pred cc---cccccC-----------HHH---HccCCCCcEEEEcCCCcccCHH
Q psy13054 1022 KD---TEQLIG-----------RKQ---FSLMKPTAILVNTSRGGLLDQE 1054 (1128)
Q Consensus 1022 ~~---T~~li~-----------~~~---l~~mk~ga~lIN~aRG~lVde~ 1054 (1128)
.. |.++-. .+. +....+++++|+++-+.=+.+.
T Consensus 81 ~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~ 130 (309)
T 1hyh_A 81 KLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITA 130 (309)
T ss_dssp GGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHHHHHH
Confidence 32 011100 122 3333578899988776544333
No 258
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=96.04 E-value=0.006 Score=70.64 Aligned_cols=87 Identities=15% Similarity=0.093 Sum_probs=60.4
Q ss_pred CeEEEEEcChhhHHHHHHHhh-CCCEEEEEeCCCC---chhh--hhcC------------C------c-c-cChHhhhcc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKA-FKVSKILYTSRRV---KEEG--TALG------------A------Q-L-VPLDTLCAE 1010 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~a-fG~~Vi~~d~~~~---~~~~--~~~g------------~------~-~-~~l~ell~~ 1010 (1128)
.+|+|||.|.||..+|..|.. -|.+|.+|+.+.. .... ...+ . . . .++++.++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 479999999999999999976 5999999983222 1111 1111 1 1 1 257788899
Q ss_pred CCEEEEecCCCcccccccCHHHHccCCCCcEEEEc
Q psy13054 1011 SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNT 1045 (1128)
Q Consensus 1011 sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~ 1045 (1128)
+|+|++++|.. .++.++ ++.-..+++++++|..
T Consensus 83 aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999954 344444 2334456789999985
No 259
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=95.98 E-value=0.0055 Score=69.31 Aligned_cols=65 Identities=20% Similarity=0.232 Sum_probs=49.9
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEE-EEeCCCCchh--hhhcCCcc-cChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKI-LYTSRRVKEE--GTALGAQL-VPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi-~~d~~~~~~~--~~~~g~~~-~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+..++.++.. +++++ ++|+...+.. +...+... .++++++. +.|+|++++|..
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 76 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTS 76 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCch
Confidence 4799999999999999999876 78877 4555444333 34456543 48999998 899999999954
No 260
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.91 E-value=0.0022 Score=70.70 Aligned_cols=79 Identities=11% Similarity=0.141 Sum_probs=56.9
Q ss_pred CCCeEEEEEcccccCccchHHHHHcCCeEEecCCCchHhHHHHHHHHHHHHHHhhhhhhhhhhcCccccccccccCCccC
Q psy13054 618 IKNLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIM 697 (1128)
Q Consensus 618 ~p~Lk~I~~~g~G~D~iD~~~a~~~gI~v~n~pg~~~~aVAE~ai~llLa~~R~i~~~~~~~r~G~W~~~~~~~~~~~~~ 697 (1128)
++.+.-.+...-++|.|+. +.| +..|+|++.. +++.++.|. +.
T Consensus 83 ld~l~~~A~~~gavnti~~----~~g----~~~g~nTd~~-----G~~~~l~~~------------------------~~ 125 (275)
T 2hk9_A 83 LDYVEDTAKEIGAVNTVKF----ENG----KAYGYNTDWI-----GFLKSLKSL------------------------IP 125 (275)
T ss_dssp CSEECHHHHHHTCCCEEEE----ETT----EEEEECCHHH-----HHHHHHHHH------------------------CT
T ss_pred HHHhhHHHHHhCCcceEEe----eCC----EEEeecCCHH-----HHHHHHHHh------------------------CC
Confidence 4556666677778888765 334 3356677554 555555431 12
Q ss_pred CCCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 698 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 698 ~l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
+++|++++|||.|.+|+++|+.+...|+++.+|++.
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 467899999999999999999999999988888864
No 261
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=95.91 E-value=0.0056 Score=69.59 Aligned_cols=66 Identities=18% Similarity=0.223 Sum_probs=50.8
Q ss_pred CCeEEEEEcChhhHHHHHHHhhC--CCEEE-EEeCCCCchh--hhhcCCcc-cChHhhhc--cCCEEEEecCCC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAF--KVSKI-LYTSRRVKEE--GTALGAQL-VPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~af--G~~Vi-~~d~~~~~~~--~~~~g~~~-~~l~ell~--~sDvV~l~lPlt 1021 (1128)
-.+|||||+|.||+..++.++.. +++++ ++|+...+.. ....++.. .++++++. +.|+|++++|..
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 86 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSG 86 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcH
Confidence 35799999999999999999877 78877 5565444433 34456643 48999997 799999999944
No 262
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=95.89 E-value=0.0067 Score=67.63 Aligned_cols=75 Identities=13% Similarity=0.070 Sum_probs=62.7
Q ss_pred ccCCccc-CHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEec
Q psy13054 306 ALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDV 382 (1128)
Q Consensus 306 ~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDV 382 (1128)
+.|++.+ |+.|+.+.||+|++++|-.+..+..+....+..++++.++|+.+=..--+...+.+.+++..+. -+|.
T Consensus 46 ~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~--~lda 121 (297)
T 4gbj_A 46 KLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAH--YVGA 121 (297)
T ss_dssp TTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCE--EEEC
T ss_pred HcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCc--eecC
Confidence 4466655 8999999999999999987788888888899999999999999887777788888888887664 4553
No 263
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=95.89 E-value=0.011 Score=64.46 Aligned_cols=99 Identities=17% Similarity=0.222 Sum_probs=71.3
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcc-cChHhhhccCCEEEEecCCCcccccccCHHH
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIGRKQ 1032 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~-~~l~ell~~sDvV~l~lPlt~~T~~li~~~~ 1032 (1128)
-+..+|+++|+|+||+.+++. . +++++++.. ++.. +.++.. .++++++.+.|+|+=|.+ .+ -+.+..
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~-~--~leLv~v~~--~k~g--elgv~a~~d~d~lla~pD~VVe~A~-~~----av~e~~ 77 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL-G--NFEKIYAYD--RISK--DIPGVVRLDEFQVPSDVSTVVECAS-PE----AVKEYS 77 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH-S--CCSEEEEEC--SSCC--CCSSSEECSSCCCCTTCCEEEECSC-HH----HHHHHH
T ss_pred cccceEEEECcCHHHHHHHhc-C--CcEEEEEEe--cccc--ccCceeeCCHHHHhhCCCEEEECCC-HH----HHHHHH
Confidence 356799999999999999998 4 777765544 3222 226554 379999999999997664 22 234446
Q ss_pred HccCCCCcEEEEcCCCcccCH---HHHHHHHhcCC
Q psy13054 1033 FSLMKPTAILVNTSRGGLLDQ---EALVEFLKDKK 1064 (1128)
Q Consensus 1033 l~~mk~ga~lIN~aRG~lVde---~aL~~aL~~g~ 1064 (1128)
...++.|.-+|-+|-|.+.|. +.|.++.++|.
T Consensus 78 ~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg 112 (253)
T 1j5p_A 78 LQILKNPVNYIIISTSAFADEVFRERFFSELKNSP 112 (253)
T ss_dssp HHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCS
T ss_pred HHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCC
Confidence 677889999999999999887 45555555554
No 264
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=95.87 E-value=0.0063 Score=69.19 Aligned_cols=66 Identities=20% Similarity=0.322 Sum_probs=50.5
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEE-EEeCCCCchh--hhhcCCc-ccChHhhh--ccCCEEEEecCCCc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKI-LYTSRRVKEE--GTALGAQ-LVPLDTLC--AESDFIFVTCALTK 1022 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi-~~d~~~~~~~--~~~~g~~-~~~l~ell--~~sDvV~l~lPlt~ 1022 (1128)
.+|||||+|.||+..++.++.. +++++ ++|+...+.. +...++. +.++++++ .+.|+|++++|...
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~ 78 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDK 78 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTS
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHH
Confidence 4799999999999999999887 88876 4555444333 3445654 35899999 66999999999643
No 265
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.87 E-value=0.013 Score=65.96 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=67.8
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCC---CCchh--hhh----cC--Cccc---C---hHhhhccCCEE
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSR---RVKEE--GTA----LG--AQLV---P---LDTLCAESDFI 1014 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~---~~~~~--~~~----~g--~~~~---~---l~ell~~sDvV 1014 (1128)
++.||++.|+|.|.+|++++..|...|+ +|.++++. ..+.+ +.+ .+ +... + +.+.++++|+|
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 3789999999999999999999999999 89999876 33222 111 11 1112 2 45667899999
Q ss_pred EEecCCC--ccc-ccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1015 FVTCALT--KDT-EQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1015 ~l~lPlt--~~T-~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
+++.|.. +.+ ...+. ..+.++++.+++++.-... .+.=|.+|-+.|
T Consensus 231 INaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P~-~T~ll~~A~~~G 279 (315)
T 3tnl_A 231 TNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKPT-KTRLLEIAEEQG 279 (315)
T ss_dssp EECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSSS-SCHHHHHHHHTT
T ss_pred EECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCCC-CCHHHHHHHHCC
Confidence 9999964 221 11121 1234567777777755442 333333443333
No 266
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=95.84 E-value=0.0091 Score=66.94 Aligned_cols=111 Identities=16% Similarity=0.165 Sum_probs=68.6
Q ss_pred CeEEEEEcChhhHHHHHHHhh--CCCEEEEEeCCCCchhhh----hc-------C--Ccc-cChHhhhccCCEEEEecCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKA--FKVSKILYTSRRVKEEGT----AL-------G--AQL-VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~a--fG~~Vi~~d~~~~~~~~~----~~-------g--~~~-~~l~ell~~sDvV~l~lPl 1020 (1128)
.+|+|||.|.+|..+|..|.. +|.+|++||....+.+.. .. . +.. .++++ ++.||+|++++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 379999999999999999976 689999999876544311 11 1 122 35666 8999999999984
Q ss_pred Cccccccc-------CH-------HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEEE
Q psy13054 1021 TKDTEQLI-------GR-------KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGAG 1069 (1128)
Q Consensus 1021 t~~T~~li-------~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~gaa 1069 (1128)
|...+.. |. +.+....+++.+|+++-.-=+....+.+. +...++.|.+
T Consensus 80 -p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~~~~~~~~~~~~~~~~rviG~g 143 (310)
T 1guz_A 80 -PRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVAWVRSGLPKERVIGMA 143 (310)
T ss_dssp -CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHHHHHHCSCGGGEEEEC
T ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchHHHHHHHHHhcCCChHHEEECC
Confidence 3332221 11 12223358899999854332222233322 3344666653
No 267
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.83 E-value=0.009 Score=67.24 Aligned_cols=110 Identities=19% Similarity=0.192 Sum_probs=69.2
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchhh--hh--c------C--CcccChHhhhccCCEEEEecCCCc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEEG--TA--L------G--AQLVPLDTLCAESDFIFVTCALTK 1022 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~~--~~--~------g--~~~~~l~ell~~sDvV~l~lPlt~ 1022 (1128)
++|+|||.|.||..+|..|...|. +|+++|....+... .+ . . +...+ .+.++.||+|++++|...
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 379999999999999999988888 99999876543321 11 1 1 11124 356789999999999543
Q ss_pred cccccc--C---------HHH---HccCCCCcEEEEcCCCcccCHHHHHHHH--hcCCceEE
Q psy13054 1023 DTEQLI--G---------RKQ---FSLMKPTAILVNTSRGGLLDQEALVEFL--KDKKIGGA 1068 (1128)
Q Consensus 1023 ~T~~li--~---------~~~---l~~mk~ga~lIN~aRG~lVde~aL~~aL--~~g~i~ga 1068 (1128)
. .++- + .+. +....|++++|+++-+.-+.+..+.+.. ...++.|.
T Consensus 80 ~-~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~~~~~~~~~~rviG~ 140 (319)
T 1a5z_A 80 K-PGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFFLKESGMDPRKVFGS 140 (319)
T ss_dssp C-SSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred C-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHHHHHHhCCChhhEEee
Confidence 2 1110 0 222 3333589999998766544334433333 34466665
No 268
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.80 E-value=0.021 Score=67.00 Aligned_cols=106 Identities=13% Similarity=0.065 Sum_probs=77.8
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC---EEEEEe----CC--CCch-h---hh----h----cCC--cccChHhhhcc
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV---SKILYT----SR--RVKE-E---GT----A----LGA--QLVPLDTLCAE 1010 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~---~Vi~~d----~~--~~~~-~---~~----~----~g~--~~~~l~ell~~ 1010 (1128)
+.++++.|+|.|..|+.+++.|...|+ +++++| ++ ..+. . .. . .+. ...++.+.+++
T Consensus 184 l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~ 263 (439)
T 2dvm_A 184 ISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKD 263 (439)
T ss_dssp TTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTT
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhcc
Confidence 678999999999999999999999998 799998 55 1111 1 10 0 111 23468899999
Q ss_pred CCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCC
Q psy13054 1011 SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKK 1064 (1128)
Q Consensus 1011 sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~ 1064 (1128)
+|+|+.+.|..+ +++.++.++.|+++.+++.++... .|.-+.+|.+.|.
T Consensus 264 aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~ 312 (439)
T 2dvm_A 264 ADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA 312 (439)
T ss_dssp CSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC
T ss_pred CCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC
Confidence 999999988633 467777889999999999995543 4555555555554
No 269
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=95.80 E-value=0.0038 Score=68.77 Aligned_cols=62 Identities=10% Similarity=0.095 Sum_probs=51.1
Q ss_pred cCHHHHhhcCCEEEEecCCCcccccccCH--HHHhcCCCCcEEEEecCCCccCHHHHHHHHHcC
Q psy13054 312 VPLDTLCAESDFIFVTCALTKDTEQLIGR--KQFSLMKPTAILINTSRGGLLDQEALVEFLKDK 373 (1128)
Q Consensus 312 vsLdeLl~~SDiVslh~PLT~~T~~lIn~--~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG 373 (1128)
.+++++++.+|+|++++|-...++.++.. +....++++.++|+++.|...+.+.|.+.+.+.
T Consensus 50 ~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 50 ETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp SSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 37999999999999999977766666642 344578999999999999878888999999873
No 270
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.78 E-value=0.052 Score=62.06 Aligned_cols=107 Identities=15% Similarity=0.157 Sum_probs=70.0
Q ss_pred cCCCeEEEEEcccccCccchHHHHHcCCeEEec---CCC--c---hHhHHHHHH--HHHHHHHHhhhhhhhhhhcCcccc
Q psy13054 617 LIKNLKVITTFSVGYDHLELHEIKARGIRVGSV---GHI--S---SDTVAEYNI--GLAIAVSRRFQEGRKCITSGEWAL 686 (1128)
Q Consensus 617 ~~p~Lk~I~~~g~G~D~iD~~~a~~~gI~v~n~---pg~--~---~~aVAE~ai--~llLa~~R~i~~~~~~~r~G~W~~ 686 (1128)
+.+++..+.-.-..+|.-.++++.++||...|. |.- . -+++++.+- +.+++..+- ... +.|+
T Consensus 84 ~~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~nt-~~~----~~g~--- 155 (361)
T 1pjc_A 84 MQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARFL-ERQ----QGGR--- 155 (361)
T ss_dssp CCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHHHT-SGG----GTSC---
T ss_pred hcCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHHHH-hhc----cCCC---
Confidence 357776666666666776788899999999864 532 1 133444333 555555432 211 1221
Q ss_pred ccccccCCccCCCCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCCC
Q psy13054 687 KQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRR 734 (1128)
Q Consensus 687 ~~~~~~~~~~~~l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~~ 734 (1128)
+ +.++.. .++++++|.|+|.|.+|+.+++.++++|++|+++|++.
T Consensus 156 -G-~~l~~l-~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 156 -G-VLLGGV-PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp -C-CCTTCB-TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred -c-eeccCC-CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 0 111111 24788999999999999999999999999999998753
No 271
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=95.77 E-value=0.0082 Score=66.81 Aligned_cols=104 Identities=20% Similarity=0.349 Sum_probs=66.6
Q ss_pred CCeEEEEEcChhhHH-HHHHHhh-CCCEEE-EEeCCCCchh--hhhcCCc-ccChHhhhccCCEEEEecCCCcccccccC
Q psy13054 956 GATVGIVGLGNIGLE-TAKLLKA-FKVSKI-LYTSRRVKEE--GTALGAQ-LVPLDTLCAESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 956 gktvGIIG~G~IG~~-vA~~l~a-fG~~Vi-~~d~~~~~~~--~~~~g~~-~~~l~ell~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
-.++||||+|.||+. .++.++. -+++++ ++|+...+.. +...++. +.++++++.+.|+|++++|...... +
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~-~-- 82 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYE-I-- 82 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHH-H--
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHH-H--
Confidence 368999999999996 8888876 478887 4665544433 3345554 4589999999999999999443221 1
Q ss_pred HHHHccCCCCc-EEEE-cCCCcccCHHHHHHHHhcCC
Q psy13054 1030 RKQFSLMKPTA-ILVN-TSRGGLLDQEALVEFLKDKK 1064 (1128)
Q Consensus 1030 ~~~l~~mk~ga-~lIN-~aRG~lVde~aL~~aL~~g~ 1064 (1128)
..+.++.|. +|+. ..--.+-+.+.|.++.++..
T Consensus 83 --~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g 117 (308)
T 3uuw_A 83 --IKILLNLGVHVYVDKPLASTVSQGEELIELSTKKN 117 (308)
T ss_dssp --HHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHT
T ss_pred --HHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence 122333343 4443 23334445666777766543
No 272
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=95.73 E-value=0.0073 Score=68.04 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=50.0
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEEE-EeCCCCchh--hhhcCCc--ccChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKIL-YTSRRVKEE--GTALGAQ--LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi~-~d~~~~~~~--~~~~g~~--~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+..++.++.. ++++++ +|+...+.. ....++. +.++++++. +.|+|++++|..
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQ 78 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGG
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCH
Confidence 5799999999999999999875 777774 555444433 3445652 458999998 799999999954
No 273
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=95.69 E-value=0.008 Score=68.04 Aligned_cols=65 Identities=23% Similarity=0.313 Sum_probs=49.6
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEEE-EeCCCCchh--hhhcCCc--ccChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKIL-YTSRRVKEE--GTALGAQ--LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi~-~d~~~~~~~--~~~~g~~--~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+..++.++.. ++++++ +|+...+.. ....++. +.++++++. +.|+|++++|..
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 75 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTN 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCc
Confidence 3799999999999999999775 778774 565444433 3445653 458999998 899999999954
No 274
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=95.68 E-value=0.0088 Score=70.50 Aligned_cols=78 Identities=14% Similarity=0.191 Sum_probs=52.7
Q ss_pred CCCCC-CEEEEEecChhhHHHHHHHhhC------CCeEEEEcCCCcc------ccCchh-----hhHHHHHhhc------
Q psy13054 697 MGLKG-ATVGIVGLGNIGLETAKLLKAF------KVSKILYTSRRVK------EEGQLF-----SLVYDFCRYS------ 752 (1128)
Q Consensus 697 ~~l~g-ktvGIiG~G~IG~~va~r~~af------g~~vi~y~~~~~~------~~~~~~-----~~~~~la~~~------ 752 (1128)
..++| |||||||+|+||.++|+.|+.. |++|++++++..+ +.+... .-+.+.++++
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILa 128 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLL 128 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEEC
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEEC
Confidence 35899 9999999999999999999987 9998866543221 123221 1266777776
Q ss_pred -CCChhhhhhhhHHHHHHhc-ceEEe
Q psy13054 753 -IGGVTIKRLVKKTFILSFG-GLVVT 776 (1128)
Q Consensus 753 -pg~~~t~~l~~~~~l~~~~-~~~~~ 776 (1128)
|-++.+ .+++ +++..|+ +.+|.
T Consensus 129 VP~~~~~-eVl~-eI~p~LK~GaILs 152 (525)
T 3fr7_A 129 ISDAAQA-DNYE-KIFSHMKPNSILG 152 (525)
T ss_dssp SCHHHHH-HHHH-HHHHHSCTTCEEE
T ss_pred CChHHHH-HHHH-HHHHhcCCCCeEE
Confidence 544443 4666 6777775 33444
No 275
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.66 E-value=0.0032 Score=69.83 Aligned_cols=95 Identities=17% Similarity=0.087 Sum_probs=65.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc----cChHhh-hccCCEEEEecCCCcccccccCH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL----VPLDTL-CAESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~----~~l~el-l~~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
++|+|||.|.||..+|..|...|.+|.++++...... ....|... .+..+. ...+|+|++++|.. .++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l~- 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVIP- 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHGG-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHHH-
Confidence 5799999999999999999988999999987644322 11223211 133444 48899999999944 5555543
Q ss_pred HHHccCCCCcEEEEcCCCcccCH
Q psy13054 1031 KQFSLMKPTAILVNTSRGGLLDQ 1053 (1128)
Q Consensus 1031 ~~l~~mk~ga~lIN~aRG~lVde 1053 (1128)
+.-..++++.++|.+.-|=-..+
T Consensus 81 ~l~~~l~~~~~iv~~~nGi~~~~ 103 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGYGQLE 103 (294)
T ss_dssp GHHHHEEEEEEEEECCSSCCCGG
T ss_pred HHHHhhCCCCEEEEeccCcccHh
Confidence 23344577889999988854433
No 276
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.66 E-value=0.012 Score=58.37 Aligned_cols=92 Identities=10% Similarity=-0.031 Sum_probs=60.1
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCc-hh-h---hhcCCcc--------cChHhh-hccCCEEEEecCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVK-EE-G---TALGAQL--------VPLDTL-CAESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~-~~-~---~~~g~~~--------~~l~el-l~~sDvV~l~lPl 1020 (1128)
..+++.|+|+|.+|+.+++.|...|.+|+++++.... .. . ...++.. ..+.+. +..+|+|+++++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 3568999999999999999999999999999976421 11 1 1223322 124444 7889999999986
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
.+.+. .-......+.+...+|...+.
T Consensus 82 d~~n~--~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 82 DADNA--FVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp HHHHH--HHHHHHHHHTSSSCEEEECSS
T ss_pred hHHHH--HHHHHHHHHCCCCEEEEEECC
Confidence 54433 223445556455555554333
No 277
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.66 E-value=0.0037 Score=67.97 Aligned_cols=106 Identities=22% Similarity=0.243 Sum_probs=70.5
Q ss_pred HHHHHHHcCCCccccccccCCcccccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCC------------------
Q psy13054 929 EGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRR------------------ 989 (1128)
Q Consensus 929 ~~~~~~~~g~w~~~~~~~~~~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~------------------ 989 (1128)
+|.++++-.+|.. .....|.+++|.|||.|.+|..+|+.|...|. ++.++|+..
T Consensus 11 ry~Rq~~l~~~g~-------~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG 83 (249)
T 1jw9_B 11 RYNRQIILRGFDF-------DGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVG 83 (249)
T ss_dssp HTHHHHTSTTTHH-------HHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTT
T ss_pred HhhheecccccCH-------HHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcC
Confidence 4555555555641 12236889999999999999999999999997 788888765
Q ss_pred -Cchh-h-h---hc--CCc--c----c---ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEc
Q psy13054 990 -VKEE-G-T---AL--GAQ--L----V---PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNT 1045 (1128)
Q Consensus 990 -~~~~-~-~---~~--g~~--~----~---~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~ 1045 (1128)
.+.+ . . +. .+. . . +++++++++|+|+.+++ +.+++.+++....+. +..+|+.
T Consensus 84 ~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 84 QPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred cHHHHHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 3322 1 1 11 111 1 1 24568889999999886 677888887655543 3445554
No 278
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.64 E-value=0.011 Score=67.43 Aligned_cols=89 Identities=26% Similarity=0.346 Sum_probs=67.0
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hh-hcCCccc----C---hHhhhccCCEEEEecCCCcccc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GT-ALGAQLV----P---LDTLCAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~-~~g~~~~----~---l~ell~~sDvV~l~lPlt~~T~ 1025 (1128)
.|++|.|+|.|.||...++.++.+|++|++.+....+.+ .. +.|...+ + +.++....|+|+.++...+.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 588999999999999999999999999999887665544 33 5665432 2 33444568999998875432
Q ss_pred cccCHHHHccCCCCcEEEEcCCC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
-...++.|+++..+|+++..
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCCC
T ss_pred ---HHHHHHHHhcCCEEEEEccC
Confidence 24667888999999998754
No 279
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=95.64 E-value=0.017 Score=63.59 Aligned_cols=90 Identities=11% Similarity=0.164 Sum_probs=60.3
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh--hhhcCCccc-ChHhhhccCCEEEEecCCCcccc----c
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE--GTALGAQLV-PLDTLCAESDFIFVTCALTKDTE----Q 1026 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~--~~~~g~~~~-~l~ell~~sDvV~l~lPlt~~T~----~ 1026 (1128)
.++++.|||.|.+|+.++..|...|+ +|.+++++..+.+ +...+.... ++. +.++|+|++++|..-... .
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~ 195 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD 195 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC
Confidence 46899999999999999999999998 7889987665543 333343322 222 478999999999653211 1
Q ss_pred -ccCHHHHccCCCCcEEEEcCCCc
Q psy13054 1027 -LIGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1027 -li~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
-++.+. ++++.+++++.-..
T Consensus 196 ~~~~~~~---l~~~~~v~DlvY~P 216 (271)
T 1npy_A 196 LAFPKAF---IDNASVAFDVVAMP 216 (271)
T ss_dssp CSSCHHH---HHHCSEEEECCCSS
T ss_pred CCCCHHH---cCCCCEEEEeecCC
Confidence 133333 34566677776533
No 280
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=95.58 E-value=0.015 Score=66.91 Aligned_cols=65 Identities=22% Similarity=0.240 Sum_probs=49.2
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhh--hhc--CCcccC---hHhhhccCCEEEEe
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEG--TAL--GAQLVP---LDTLCAESDFIFVT 1017 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~--~~~--g~~~~~---l~ell~~sDvV~l~ 1017 (1128)
-+.||||+|||.|.+|+.+++.++.+|++|+++|+....+.. .+. ...+.+ +.++++++|+|+..
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 478999999999999999999999999999999977654321 111 011223 67888999998653
No 281
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=95.57 E-value=0.013 Score=65.99 Aligned_cols=65 Identities=11% Similarity=0.122 Sum_probs=48.3
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEE-EEeCCCCchh--hhhcCCc--ccChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKI-LYTSRRVKEE--GTALGAQ--LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi-~~d~~~~~~~--~~~~g~~--~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.++||||+|.||+..++.++.. +++++ ++|+...+.. +...++. +.++++++. +.|+|++++|..
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQ 78 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGG
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcH
Confidence 5799999999999999988765 56666 4565555443 3445653 458999998 799999999943
No 282
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=95.54 E-value=0.084 Score=58.84 Aligned_cols=94 Identities=14% Similarity=0.162 Sum_probs=69.9
Q ss_pred ccCCCeEEEEEc---ChhhHHHHHHHhhC-CCEEEEEeCCCCchh---hhhcCCcc---cChHhhhccCCEEEEecCCCc
Q psy13054 953 GLKGATVGIVGL---GNIGLETAKLLKAF-KVSKILYTSRRVKEE---GTALGAQL---VPLDTLCAESDFIFVTCALTK 1022 (1128)
Q Consensus 953 ~L~gktvGIIG~---G~IG~~vA~~l~af-G~~Vi~~d~~~~~~~---~~~~g~~~---~~l~ell~~sDvV~l~lPlt~ 1022 (1128)
.+.|++|++||= |++.+..+..+..| |++|.+..|..-.+. ..+.|.+. .+++|.++.+|||..-.=-.+
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~e 225 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKE 225 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCST
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccc
Confidence 378999999998 59999999999999 999998876543322 23445443 489999999999987654331
Q ss_pred c------c-----ccccCHHHHccCCCCcEEEEcC
Q psy13054 1023 D------T-----EQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1023 ~------T-----~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
. - ..-++.+.++.+||+++|.-+.
T Consensus 226 r~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 226 RFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp TSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred cccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 1 0 2456888888888888887664
No 283
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=95.51 E-value=0.011 Score=66.19 Aligned_cols=105 Identities=13% Similarity=0.167 Sum_probs=65.3
Q ss_pred CeEEEEEcChhhHH-HHHHHhhC-CCEEEEEeCCCCchh--hhhcCCc--ccChHhhh-ccCCEEEEecCCCcccccccC
Q psy13054 957 ATVGIVGLGNIGLE-TAKLLKAF-KVSKILYTSRRVKEE--GTALGAQ--LVPLDTLC-AESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 957 ktvGIIG~G~IG~~-vA~~l~af-G~~Vi~~d~~~~~~~--~~~~g~~--~~~l~ell-~~sDvV~l~lPlt~~T~~li~ 1029 (1128)
.+|||||+|.||+. +++.++.. +++++++|+...+.. +...++. +.+..+++ .+.|+|++++|.... .
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h-~---- 77 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVH-S---- 77 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGH-H----
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhH-H----
Confidence 37999999999994 89988765 788887776655443 3445654 34555666 789999999993321 1
Q ss_pred HHHHccCCCCc-EEEEc-CCCcccCHHHHHHHHhcCCce
Q psy13054 1030 RKQFSLMKPTA-ILVNT-SRGGLLDQEALVEFLKDKKIG 1066 (1128)
Q Consensus 1030 ~~~l~~mk~ga-~lIN~-aRG~lVde~aL~~aL~~g~i~ 1066 (1128)
+-..+.++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 78 ~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (323)
T 1xea_A 78 TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 116 (323)
T ss_dssp HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCe
Confidence 11223444553 55552 122333455677777665543
No 284
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.50 E-value=0.019 Score=61.43 Aligned_cols=92 Identities=18% Similarity=0.117 Sum_probs=63.5
Q ss_pred CcccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh---hhhcCCccc--C-hHhhhccCCEEEEecCCCc
Q psy13054 949 PNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE---GTALGAQLV--P-LDTLCAESDFIFVTCALTK 1022 (1128)
Q Consensus 949 ~~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~---~~~~g~~~~--~-l~ell~~sDvV~l~lPlt~ 1022 (1128)
|.+..+.|++|.|||.|.+|..-++.|...|++|.++++...... ..+.+++.. + -++.+..+|+|+.+.. .+
T Consensus 24 Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~-d~ 102 (223)
T 3dfz_A 24 TVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATN-DQ 102 (223)
T ss_dssp EEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCC-CT
T ss_pred ccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCC-CH
Confidence 445589999999999999999999999999999999988655332 122233322 2 2356778998886544 44
Q ss_pred ccccccCHHHHccCCCCcEEEEcC
Q psy13054 1023 DTEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1023 ~T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
+. |....+..+ -.++||++
T Consensus 103 ~~----N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 103 AV----NKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp HH----HHHHHHHSC-TTCEEEC-
T ss_pred HH----HHHHHHHHh-CCCEEEEe
Confidence 42 444444456 56778874
No 285
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.49 E-value=0.0075 Score=67.60 Aligned_cols=55 Identities=13% Similarity=0.091 Sum_probs=30.4
Q ss_pred hhhhhcCccccccccccCCccCCCCCCEEEEEecChhhHHHHHHHhhCCC-eEEEEcCC
Q psy13054 676 RKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSR 733 (1128)
Q Consensus 676 ~~~~r~G~W~~~~~~~~~~~~~~l~gktvGIiG~G~IG~~va~r~~afg~-~vi~y~~~ 733 (1128)
.+++|++.|...+++. ..+...-++|||||+|++|+.+|+.+...|. +|.+||+.
T Consensus 2 ~~~~~~~~~~~~~~~~---~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTEN---LYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --------------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CcccccccccccCccc---ccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4678889887665553 3334456899999999999999999999999 99999985
No 286
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=95.48 E-value=0.12 Score=57.78 Aligned_cols=102 Identities=13% Similarity=0.138 Sum_probs=74.4
Q ss_pred ccCCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh--h-hhcCCc-ccChHhhhccCCEEEEecC-C-----C
Q psy13054 953 GLKGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE--G-TALGAQ-LVPLDTLCAESDFIFVTCA-L-----T 1021 (1128)
Q Consensus 953 ~L~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~-~~~g~~-~~~l~ell~~sDvV~l~lP-l-----t 1021 (1128)
.+.|.+|++||= +++.+..+..+..||++|.+..|..-.+. . ....++ ..+++|.++.+|||..-.= . .
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~ 230 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAE 230 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC-------
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccc
Confidence 378999999998 89999999999999999999877654332 1 111244 3489999999999997332 0 0
Q ss_pred cc------cccccCHHHHccCCCCcEEEEcC---CCcccCHH
Q psy13054 1022 KD------TEQLIGRKQFSLMKPTAILVNTS---RGGLLDQE 1054 (1128)
Q Consensus 1022 ~~------T~~li~~~~l~~mk~ga~lIN~a---RG~lVde~ 1054 (1128)
++ ...-++.+.++.+||+++|.-+. ||.=|+.+
T Consensus 231 ~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~~e 272 (301)
T 2ef0_A 231 REKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETTEE 272 (301)
T ss_dssp -CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBCHH
T ss_pred hhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccCHH
Confidence 11 12457999999999999999886 56555544
No 287
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.47 E-value=0.014 Score=64.32 Aligned_cols=101 Identities=14% Similarity=0.070 Sum_probs=68.1
Q ss_pred cCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCCCCCCC
Q psy13054 312 VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPAD 391 (1128)
Q Consensus 312 vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~EPl~~~ 391 (1128)
.++++.++.||+|++++|-+.+.+.-+-++..+.+++++++++.+-+ +...+|.+++..+. ...++..|.
T Consensus 77 ~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~~-~~ig~h~~~------- 146 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRGD-KFLALHFAN------- 146 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCGG-GEEEEEECS-------
T ss_pred CCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCCc-ceEEEccCC-------
Confidence 48899999999999999988888777777888889999999943333 46788888886532 345666664
Q ss_pred CCcccCCCCCCCCcccccccCCCCChhhhHHHHHHHHHHHH
Q psy13054 392 HPLVQLDNCGGAGLDVMIPEPLPADHPLVQLDNCEEFFEEL 432 (1128)
Q Consensus 392 ~pL~~lpNvg~~~~~v~tph~~~~t~~~~~~~n~~~~~~~~ 432 (1128)
|.+.++.+ .++|+.... .-..+.+..+++..
T Consensus 147 -p~~~~~lv------evv~~~~t~---~~~~~~~~~l~~~~ 177 (283)
T 4e12_A 147 -HVWVNNTA------EVMGTTKTD---PEVYQQVVEFASAI 177 (283)
T ss_dssp -STTTSCEE------EEEECTTSC---HHHHHHHHHHHHHT
T ss_pred -CcccCceE------EEEeCCCCC---HHHHHHHHHHHHHc
Confidence 23345555 556653222 22344455555543
No 288
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=94.46 E-value=0.0024 Score=67.15 Aligned_cols=86 Identities=14% Similarity=0.073 Sum_probs=59.2
Q ss_pred eeCCCCCCCCccccccCCccccceeeccccccc-ccccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCC
Q psy13054 269 FLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFER-SNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMK 347 (1128)
Q Consensus 269 ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~-~~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK 347 (1128)
++|.|.+|+.+++.....+ ..+..+++... +.....+++..++++++++||+|++++|.. .++.++ .++.++
T Consensus 24 iIG~G~mG~~la~~L~~~G---~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~-~~~~v~---~l~~~~ 96 (201)
T 2yjz_A 24 IFGTGDFGKSLGLKMLQCG---YSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE-HYDFLA---ELADSL 96 (201)
Confidence 6789999988877432221 12333443221 111223555568899999999999999964 678877 367788
Q ss_pred CCcEEEEecCCCcc
Q psy13054 348 PTAILINTSRGGLL 361 (1128)
Q Consensus 348 ~gaiLINtaRG~lV 361 (1128)
++.++||+++|--.
T Consensus 97 ~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 97 KGRVLIDVSNNQKM 110 (201)
Confidence 99999999999753
No 289
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=95.46 E-value=0.013 Score=65.68 Aligned_cols=64 Identities=13% Similarity=0.319 Sum_probs=47.7
Q ss_pred eEEEEEcChhhHHHHHHHhhC-CCEEE-EEeCCCCchh--hhhcCC-c-ccChHhhh-ccCCEEEEecCCC
Q psy13054 958 TVGIVGLGNIGLETAKLLKAF-KVSKI-LYTSRRVKEE--GTALGA-Q-LVPLDTLC-AESDFIFVTCALT 1021 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~af-G~~Vi-~~d~~~~~~~--~~~~g~-~-~~~l~ell-~~sDvV~l~lPlt 1021 (1128)
+|||||+|.||+.+++.++.. +++++ ++|+...+.. ....+. . +.++++++ .+.|+|++++|..
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~ 73 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNS 73 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGG
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChH
Confidence 699999999999999999876 57765 5554443333 334453 2 35899999 7899999999943
No 290
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.46 E-value=0.01 Score=64.09 Aligned_cols=41 Identities=17% Similarity=0.266 Sum_probs=32.4
Q ss_pred ccCCCCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCCCc
Q psy13054 695 NIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRV 735 (1128)
Q Consensus 695 ~~~~l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~~~ 735 (1128)
...++.+++|||||+|++|+.+|+++...|.+|++|++...
T Consensus 13 ~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 13 ENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 45578999999999999999999999999999999987533
No 291
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=95.43 E-value=0.01 Score=67.57 Aligned_cols=69 Identities=16% Similarity=0.232 Sum_probs=50.6
Q ss_pred ccCCCeEEEEEcChhhH-HHHHHHhhC-CCEEE-EEeCCCCchh--hhhcCCcc-cChHhhhc--cCCEEEEecCCC
Q psy13054 953 GLKGATVGIVGLGNIGL-ETAKLLKAF-KVSKI-LYTSRRVKEE--GTALGAQL-VPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~-~vA~~l~af-G~~Vi-~~d~~~~~~~--~~~~g~~~-~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.+.-.+|||||+|.||+ .+++.++.. +++++ ++|+...+.. ++..|+.. .++++++. +.|+|++++|..
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~ 100 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAV 100 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGG
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcH
Confidence 44556899999999999 788888877 78877 4565444333 34456654 48999997 589999999944
No 292
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.39 E-value=0.022 Score=64.42 Aligned_cols=114 Identities=16% Similarity=0.196 Sum_probs=72.2
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchhh--h---h----c--C--Ccc-cChHhhhccCCEEEEec--
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEEG--T---A----L--G--AQL-VPLDTLCAESDFIFVTC-- 1018 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~~--~---~----~--g--~~~-~~l~ell~~sDvV~l~l-- 1018 (1128)
..+|+|||.|.+|..+|..|..-|. +|++||....+.+. . . . . ++. .++++.++.||+|+++.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 3589999999999999999988787 89999977654331 1 0 1 1 122 37887899999999999
Q ss_pred CCCccc------ccc-c--C----H---HHHccCCCCcEEEEcCCCcccCHHHHHHHH--hcCCceEEE
Q psy13054 1019 ALTKDT------EQL-I--G----R---KQFSLMKPTAILVNTSRGGLLDQEALVEFL--KDKKIGGAG 1069 (1128)
Q Consensus 1019 Plt~~T------~~l-i--~----~---~~l~~mk~ga~lIN~aRG~lVde~aL~~aL--~~g~i~gaa 1069 (1128)
|..+.- +-- + | . +.+....|++++||.+-..=+....+.+.- ...++.|.+
T Consensus 89 p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t~~~~~~~~~~~~rviG~g 157 (331)
T 1pzg_A 89 TKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVMCEASGVPTNMICGMA 157 (331)
T ss_dssp SSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred CCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHHHHHHHhcCCChhcEEecc
Confidence 654321 110 0 0 1 123344589999998665444344433332 333555553
No 293
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.38 E-value=0.015 Score=64.89 Aligned_cols=112 Identities=17% Similarity=0.216 Sum_probs=70.4
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh--hhhc--C------Cccc-ChHhhhccCCEEEEecCCCcc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE--GTAL--G------AQLV-PLDTLCAESDFIFVTCALTKD 1023 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~--~~~~--g------~~~~-~l~ell~~sDvV~l~lPlt~~ 1023 (1128)
++|+|||.|.+|..+|..+...|. +|+++|....+.. ..+. . .+.. +-.+.++.||+|+++.+....
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~~~ 80 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGANQK 80 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC-----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCCCC
Confidence 479999999999999999988888 9999987654322 1111 1 1111 223578999999999953221
Q ss_pred -----------cccccC--HHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1024 -----------TEQLIG--RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1024 -----------T~~li~--~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
+..++. .+.++...|++++|+++-+.-+....+.+.....++.|.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 81 PGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred CCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 111110 023344468999999877665555556666555566555
No 294
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=95.35 E-value=0.0041 Score=68.71 Aligned_cols=104 Identities=17% Similarity=0.145 Sum_probs=70.7
Q ss_pred eeeeCCCCCCCCccccccCCccccceeecccccccc--cccccCCcc-cCHHHHhhcCCEEEEecCCCcccccccC--HH
Q psy13054 267 EFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERS--NGTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIG--RK 341 (1128)
Q Consensus 267 ~~ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~--~~~~~g~~~-vsLdeLl~~SDiVslh~PLT~~T~~lIn--~~ 341 (1128)
+.++|.|.+|+.+++.....+ ..+..+++.+.. ...+.|++. .+++++++.+|+|++++|-...++.++. ++
T Consensus 8 i~iiG~G~~G~~~a~~l~~~g---~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~ 84 (299)
T 1vpd_A 8 VGFIGLGIMGKPMSKNLLKAG---YSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG 84 (299)
T ss_dssp EEEECCSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred EEEECchHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcch
Confidence 347788888887766421111 233444432211 112225544 3899999999999999997777777763 24
Q ss_pred HHhcCCCCcEEEEecCCCccCHHHHHHHHHcC
Q psy13054 342 QFSLMKPTAILINTSRGGLLDQEALVEFLKDK 373 (1128)
Q Consensus 342 ~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG 373 (1128)
..+.++++.++||++.|...+.+.|.+.+.+.
T Consensus 85 l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 85 IIEGAKPGTVLIDMSSIAPLASREISDALKAK 116 (299)
T ss_dssp HHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 45678999999999999877788899998874
No 295
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=95.35 E-value=0.017 Score=65.84 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=50.2
Q ss_pred CCeEEEEEcChhhHHHHHHHhhC-CCEEEEE-eCCCCchh-hhhcCCcc-cChHhhhc--cCCEEEEecCCC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAF-KVSKILY-TSRRVKEE-GTALGAQL-VPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~af-G~~Vi~~-d~~~~~~~-~~~~g~~~-~~l~ell~--~sDvV~l~lPlt 1021 (1128)
-.+|||||+|.||+..++.++.. +++++++ |+...+.. +...|+.. .++++++. +.|+|++++|..
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPND 76 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGG
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcH
Confidence 35799999999999999999887 7887754 54433333 34456643 48999998 789999999954
No 296
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=95.33 E-value=0.009 Score=71.08 Aligned_cols=74 Identities=20% Similarity=0.194 Sum_probs=61.5
Q ss_pred cCHHHHhh---cCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecCCCC
Q psy13054 312 VPLDTLCA---ESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPE 386 (1128)
Q Consensus 312 vsLdeLl~---~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVfe~E 386 (1128)
.+++|+++ .||+|++++|-.+.++.++ ++.+..|++|.++|+++.+...|...+.+.|++..+.....-|.-.|
T Consensus 57 ~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~ 133 (484)
T 4gwg_A 57 QSLKEMVSKLKKPRRIILLVKAGQAVDDFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE 133 (484)
T ss_dssp SSHHHHHHTBCSSCEEEECSCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHH
T ss_pred CCHHHHHhhccCCCEEEEecCChHHHHHHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCH
Confidence 48999987 4999999999888888887 56778899999999999999999999999999876665554554443
No 297
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=95.32 E-value=0.17 Score=56.68 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=69.5
Q ss_pred ccCCCeEEEEEcC--hhhHHHHHHHhhCCCEEEEEeCCCCchh--h----h----hcCCc---ccChHhhhccCCEEEEe
Q psy13054 953 GLKGATVGIVGLG--NIGLETAKLLKAFKVSKILYTSRRVKEE--G----T----ALGAQ---LVPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 953 ~L~gktvGIIG~G--~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~----~----~~g~~---~~~l~ell~~sDvV~l~ 1017 (1128)
.+.|++|++||=| ++.+..+..+..||++|.+..|..-.+. . + +.|.. ..+++|.++.+|||..-
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~ 224 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD 224 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence 3789999999986 9999999999999999999887653322 1 1 34533 24899999999999983
Q ss_pred cC-------CCcc-----cccccCHHHHccCCCCcEEEEcC
Q psy13054 1018 CA-------LTKD-----TEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1018 lP-------lt~~-----T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
.= ..++ ...-++++.++.+||+++|.-+.
T Consensus 225 ~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 265 (307)
T 2i6u_A 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCL 265 (307)
T ss_dssp CSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECS
T ss_pred ceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCC
Confidence 32 0111 12346888999999999888774
No 298
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.30 E-value=0.0059 Score=67.47 Aligned_cols=66 Identities=20% Similarity=0.220 Sum_probs=53.2
Q ss_pred CCcc-cCHHHHhhcCCEEEEecCCCcccccccC--HHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcC
Q psy13054 308 GAQL-VPLDTLCAESDFIFVTCALTKDTEQLIG--RKQFSLMKPTAILINTSRGGLLDQEALVEFLKDK 373 (1128)
Q Consensus 308 g~~~-vsLdeLl~~SDiVslh~PLT~~T~~lIn--~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG 373 (1128)
|+.. .+++++++.+|+|++++|-...++.++. ++....++++.++|+++.|...+.+.|.+.+.+.
T Consensus 47 g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 47 GAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp TCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred CCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4443 3799999999999999998777777774 3455678999999999998866788899888764
No 299
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.25 E-value=0.0056 Score=67.08 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=66.6
Q ss_pred eeCCCCCCCCccccccCCccccceeecccccccc--cccccCCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcC
Q psy13054 269 FLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERS--NGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLM 346 (1128)
Q Consensus 269 ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~--~~~~~g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~M 346 (1128)
++|.|.+|+.+++.... + ..+..+++.... ...+.|+...+++++++.+|+|++++|....+..++ ++..+.+
T Consensus 6 iiG~G~~G~~~a~~l~~-g---~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~~l 80 (289)
T 2cvz_A 6 FIGLGAMGYPMAGHLAR-R---FPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVA-EALYPYL 80 (289)
T ss_dssp EECCSTTHHHHHHHHHT-T---SCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHH-HHHTTTC
T ss_pred EEcccHHHHHHHHHHhC-C---CeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHH-HHHHhhC
Confidence 56777777776653221 1 123333332111 111124444447788999999999999766677666 4445678
Q ss_pred CCCcEEEEecCCCccCHHHHHHHHHcC
Q psy13054 347 KPTAILINTSRGGLLDQEALVEFLKDK 373 (1128)
Q Consensus 347 K~gaiLINtaRG~lVDe~AL~~AL~sG 373 (1128)
+++.++|+++.+...+.+.|.+.+.+.
T Consensus 81 ~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 81 REGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp CTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 999999999999888888999999874
No 300
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=95.23 E-value=0.0074 Score=67.45 Aligned_cols=75 Identities=13% Similarity=0.178 Sum_probs=60.1
Q ss_pred ccCCccc-CHHHHhhcCCEEEEecCCCcccccccCH--HHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEec
Q psy13054 306 ALGAQLV-PLDTLCAESDFIFVTCALTKDTEQLIGR--KQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDV 382 (1128)
Q Consensus 306 ~~g~~~v-sLdeLl~~SDiVslh~PLT~~T~~lIn~--~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDV 382 (1128)
+.|++.+ |+.|+.+.||+|++++|-.+..+..+.. ..++.+++|.++|+.+=..--+...+.+.+++.-+. -+|.
T Consensus 44 ~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~--~lDa 121 (300)
T 3obb_A 44 AAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLA--MLDA 121 (300)
T ss_dssp HTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCE--EEEC
T ss_pred HcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE--EEec
Confidence 3466655 8999999999999999988887766633 367889999999999988888889999999987653 4664
No 301
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.19 E-value=0.017 Score=64.81 Aligned_cols=64 Identities=16% Similarity=0.278 Sum_probs=47.2
Q ss_pred eEEEEEcChhhHHH-HHHHhhCCCEEE-EEeCCCCchh--hhhcCCc--ccChHhhhc--cCCEEEEecCCC
Q psy13054 958 TVGIVGLGNIGLET-AKLLKAFKVSKI-LYTSRRVKEE--GTALGAQ--LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 958 tvGIIG~G~IG~~v-A~~l~afG~~Vi-~~d~~~~~~~--~~~~g~~--~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
+|||||+|.||+.. ++.+..-+++++ ++|+...+.. ....++. +.+++++++ +.|+|++++|..
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~ 73 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNE 73 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGG
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChh
Confidence 69999999999998 777766788876 4565444333 3345653 458999987 499999999943
No 302
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.13 E-value=0.14 Score=57.32 Aligned_cols=94 Identities=13% Similarity=0.171 Sum_probs=66.2
Q ss_pred ccCCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCch--h--hhhcCCc---ccChHhhhccCCEEEEec----CC
Q psy13054 953 GLKGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKE--E--GTALGAQ---LVPLDTLCAESDFIFVTC----AL 1020 (1128)
Q Consensus 953 ~L~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~--~--~~~~g~~---~~~l~ell~~sDvV~l~l----Pl 1020 (1128)
.+.|++|++||= +++.+..+..+..||++|.+..|..-.+ . .++.|.. ..+++|.++.+|||..-. ..
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~ 230 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGF 230 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC-----
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcc
Confidence 378999999997 5788888888999999998887643222 1 1122332 248999999999998743 11
Q ss_pred ---Ccc-----cccccCHHHHccCCCCcEEEEcC
Q psy13054 1021 ---TKD-----TEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1021 ---t~~-----T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
.++ ...-++.+.++.+|++++|.-+.
T Consensus 231 e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l 264 (309)
T 4f2g_A 231 EAENEARKRAFADWCVDEEMMSHANSDALFMHCL 264 (309)
T ss_dssp -------CCSGGGGCBCHHHHTTSCTTCEEEECS
T ss_pred hhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC
Confidence 000 12457999999999999998774
No 303
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.12 E-value=0.021 Score=65.67 Aligned_cols=151 Identities=15% Similarity=0.161 Sum_probs=98.1
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCC----Cc-h--h------hhhcC--CcccChHhhhccCCEEEE
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRR----VK-E--E------GTALG--AQLVPLDTLCAESDFIFV 1016 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~----~~-~--~------~~~~g--~~~~~l~ell~~sDvV~l 1016 (1128)
.+...+|.|+|.|..|..+|+.+.++|. +|+++|+.. .+ . . +.... -...+|+|.++.+|+++=
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG 264 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIG 264 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEe
Confidence 4778899999999999999999999999 999999762 11 1 0 11111 013469999999999885
Q ss_pred ecCCCcccccccCHHHHccCCCCcEEEEcCCCcc-cCHHHHHHHHhcCC-ceEEEEeccCCCCCCCCCccccCCCeEECC
Q psy13054 1017 TCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGL-LDQEALVEFLKDKK-IGGAGLDVMIPEPLPADHPLVQLDNCVLTP 1094 (1128)
Q Consensus 1017 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~l-Vde~aL~~aL~~g~-i~gaaLDV~e~EPl~~~~pL~~~pNvilTP 1094 (1128)
. ++-++|+++.++.|+++++++-+|+... +..+..+ +.|+ |.+.| .+ +.| =+.-|+++-|
T Consensus 265 ~-----Sapgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe~a~---~~g~~i~atG------rs---~~p-~Q~NN~~~FP 326 (398)
T 2a9f_A 265 V-----SAPGVLKAEWISKMAARPVIFAMANPIPEIYPDEAL---EAGAYIVGTG------RS---DFP-NQINNVLAFP 326 (398)
T ss_dssp C-----CSTTCCCHHHHHTSCSSCEEEECCSSSCSSCHHHHH---TTTCSEEEES------CT---TSS-SBCCGGGTHH
T ss_pred c-----CCCCCCCHHHHHhhCCCCEEEECCCCCccCCHHHHH---HhCCeEEEeC------CC---CCC-CcCCceeEcc
Confidence 4 2358999999999999999999999764 2333333 3355 33332 11 111 2445676666
Q ss_pred CCCCCcH-----HHHHHHHHHHHHHHHHHHcC
Q psy13054 1095 HTSSATK-----AVRDEKSSTSAENIIRGYKG 1121 (1128)
Q Consensus 1095 Hiag~t~-----e~~~~~~~~~~~nl~~~l~G 1121 (1128)
=++-..- ...++|...+++-|.....-
T Consensus 327 gi~~Gal~~~a~~I~d~m~~aAa~alA~~~~~ 358 (398)
T 2a9f_A 327 GIFRGALDARAKTITVEMQIAAAKGIASLVPD 358 (398)
T ss_dssp HHHHHHHHHTCSSCCHHHHHHHHHHHHHTCSS
T ss_pred hHHHHHHHcCCcCCCHHHHHHHHHHHHhcCCc
Confidence 4332111 12245666666666665543
No 304
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.05 E-value=0.014 Score=68.02 Aligned_cols=90 Identities=20% Similarity=0.268 Sum_probs=63.8
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-----C---hHhh-hccCCEEEEecCCCcccc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-----P---LDTL-CAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-----~---l~el-l~~sDvV~l~lPlt~~T~ 1025 (1128)
+.+|.|+|+|++|+.+++.|+..|..|++.|....... ....|+... + |.++ +.++|+|++++|..+.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 45699999999999999999999999999997766544 444455332 2 3333 678999999999665544
Q ss_pred cccCHHHHccCCCCcEEEEcCC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
.+ ......+.|...+|--++
T Consensus 84 ~i--~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 84 QL--TEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HH--HHHHHHHCTTCEEEEEES
T ss_pred HH--HHHHHHhCCCCeEEEEEC
Confidence 33 345566667755554433
No 305
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=95.04 E-value=0.023 Score=64.78 Aligned_cols=68 Identities=18% Similarity=0.226 Sum_probs=50.5
Q ss_pred cCCCeEEEEEcChhhHHHHHHHh-h-CCCEEE-EEeCCCCchh--hhhcC--Cc-ccChHhhhc--cCCEEEEecCCC
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLK-A-FKVSKI-LYTSRRVKEE--GTALG--AQ-LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~-a-fG~~Vi-~~d~~~~~~~--~~~~g--~~-~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
+.-.+|||||+|.||+..++.+. . -+++++ ++|+...+.. +...+ .. +.++++++. +.|+|++++|..
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 98 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNE 98 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGG
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcH
Confidence 34468999999999999999987 4 378877 4666655543 34455 33 458999997 489999999954
No 306
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.99 E-value=0.024 Score=63.67 Aligned_cols=59 Identities=10% Similarity=0.099 Sum_probs=43.9
Q ss_pred cCHHH-HhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHc
Q psy13054 312 VPLDT-LCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKD 372 (1128)
Q Consensus 312 vsLde-Ll~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~s 372 (1128)
.++++ ++++||+|++++|... +..++ ++....+++++++++++-....-.+++.+.+..
T Consensus 85 ~~~~~~~~~~aDvVilavp~~~-~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~ 144 (314)
T 3ggo_A 85 TSIAKVEDFSPDFVMLSSPVRT-FREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK 144 (314)
T ss_dssp SCTTGGGGGCCSEEEECSCGGG-HHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG
T ss_pred CCHHHHhhccCCEEEEeCCHHH-HHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC
Confidence 47888 8999999999999653 44455 455567999999999976654445666666654
No 307
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.98 E-value=0.026 Score=63.64 Aligned_cols=111 Identities=19% Similarity=0.195 Sum_probs=68.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchhh-----hh----c--C--Ccc-cChHhhhccCCEEEEec--C
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEEG-----TA----L--G--AQL-VPLDTLCAESDFIFVTC--A 1019 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~~-----~~----~--g--~~~-~~l~ell~~sDvV~l~l--P 1019 (1128)
++|+|||.|.+|..+|..+..-|. +|++||....+.+. .. . . ++. .++ +.++.||+|+++. |
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAGFT 83 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCSCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 589999999999999999988887 89999977654331 11 1 1 222 356 7789999999998 5
Q ss_pred CCccc------c-ccc--C----HH---HHccCCCCcEEEEcCCCcccCHHHHHHHH--hcCCceEE
Q psy13054 1020 LTKDT------E-QLI--G----RK---QFSLMKPTAILVNTSRGGLLDQEALVEFL--KDKKIGGA 1068 (1128)
Q Consensus 1020 lt~~T------~-~li--~----~~---~l~~mk~ga~lIN~aRG~lVde~aL~~aL--~~g~i~ga 1068 (1128)
..+.- + .++ | .+ .+....|++++|+.+-..-+....+.+.- ...++.|.
T Consensus 84 ~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~t~~~~~~~g~~~~rviG~ 150 (322)
T 1t2d_A 84 KAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGL 150 (322)
T ss_dssp SCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHHHHHHHHhcCCChHHEEec
Confidence 43321 1 010 0 11 22333589999998654333333333322 24456555
No 308
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=94.95 E-value=0.02 Score=64.80 Aligned_cols=65 Identities=20% Similarity=0.218 Sum_probs=48.4
Q ss_pred CeEEEEEcChhhHHHHHHHh-h-CCCEEEE-EeCCCCchh--hhhcC--Cc-ccChHhhhcc--CCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLK-A-FKVSKIL-YTSRRVKEE--GTALG--AQ-LVPLDTLCAE--SDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~-a-fG~~Vi~-~d~~~~~~~--~~~~g--~~-~~~l~ell~~--sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+..++.++ . -++++++ +|+...+.. ....+ .. +.++++++++ .|+|++++|..
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 77 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGP 77 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGG
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCch
Confidence 37999999999999999998 5 4788774 554444333 34456 33 3589999986 99999999944
No 309
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.88 E-value=0.023 Score=63.85 Aligned_cols=68 Identities=13% Similarity=0.161 Sum_probs=50.8
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCC---chh--hhh----cCC--c---ccCh---HhhhccCCEEE
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRV---KEE--GTA----LGA--Q---LVPL---DTLCAESDFIF 1015 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~---~~~--~~~----~g~--~---~~~l---~ell~~sDvV~ 1015 (1128)
+.||++.|+|.|.+|++++..|...|+ +|.++++... +.+ +.+ .+. . ..++ .+.+.++|+|+
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiII 225 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILT 225 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEE
Confidence 789999999999999999999999999 8888987732 222 111 111 1 1233 45688999999
Q ss_pred EecCCC
Q psy13054 1016 VTCALT 1021 (1128)
Q Consensus 1016 l~lPlt 1021 (1128)
++.|..
T Consensus 226 NaTp~G 231 (312)
T 3t4e_A 226 NGTKVG 231 (312)
T ss_dssp ECSSTT
T ss_pred ECCcCC
Confidence 999965
No 310
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.86 E-value=0.022 Score=67.79 Aligned_cols=63 Identities=11% Similarity=0.076 Sum_probs=53.8
Q ss_pred cCHHHHhhc---CCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCe
Q psy13054 312 VPLDTLCAE---SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKI 375 (1128)
Q Consensus 312 vsLdeLl~~---SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~I 375 (1128)
.+++|+++. +|+|++++|-++.++.++ ++....+++|.++|+++.|.-.+...+.+.|++..+
T Consensus 67 ~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 67 YTVKEFVESLETPRRILLMVKAGAGTDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF 132 (480)
T ss_dssp SSHHHHHHTBCSSCEEEECSCSSSHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHhCCCCCCEEEEECCCHHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 389999887 999999999888888888 355678899999999999988888889999987544
No 311
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=94.85 E-value=0.017 Score=64.42 Aligned_cols=102 Identities=12% Similarity=0.156 Sum_probs=63.4
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEE-EEeCCCCchh-hhhcCCc-ccChHhhhc--cCCEEEEecCCCcccccccCH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKI-LYTSRRVKEE-GTALGAQ-LVPLDTLCA--ESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi-~~d~~~~~~~-~~~~g~~-~~~l~ell~--~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
.+|||||+|.||+..++.++.. +++++ ++|+...+.. ..+. +. +.+++++++ ++|+|++++|..... +
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~-----~ 84 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHA-----E 84 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHH-----H
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHH-----H
Confidence 4799999999999999999876 67765 6665543332 1111 32 347899986 799999999943221 1
Q ss_pred HHHccCCCCc-EEEEc-CCCcccCHHHHHHHHhcCC
Q psy13054 1031 KQFSLMKPTA-ILVNT-SRGGLLDQEALVEFLKDKK 1064 (1128)
Q Consensus 1031 ~~l~~mk~ga-~lIN~-aRG~lVde~aL~~aL~~g~ 1064 (1128)
-..+.++.|. +++.- .--.+-+.+.|.++.++..
T Consensus 85 ~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g 120 (315)
T 3c1a_A 85 ITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATG 120 (315)
T ss_dssp HHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcC
Confidence 2223355564 55552 2223334466776665543
No 312
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.85 E-value=0.014 Score=61.46 Aligned_cols=89 Identities=13% Similarity=0.063 Sum_probs=58.3
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--hhhcCCccc--------ChHhh-hccCCEEEEecCCCcccc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--GTALGAQLV--------PLDTL-CAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g~~~~--------~l~el-l~~sDvV~l~lPlt~~T~ 1025 (1128)
++|.|+|+|.+|+.+|+.|...|.+|+++|....+.. ....+.... .++++ +.++|+|++++|....+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 80 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNL 80 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHHH
Confidence 3689999999999999999999999999997665443 122343221 24443 678999999999665432
Q ss_pred cccCHHHHccCCCCcEEEEcCC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
+-......+.+...+|-..+
T Consensus 81 --~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 81 --FIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp --HHHHHHHHTSCCCEEEECCC
T ss_pred --HHHHHHHHHcCCCeEEEEEe
Confidence 22233334334444544333
No 313
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.82 E-value=0.016 Score=66.08 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=66.3
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCC---Cchh-hhhcCCccc---ChHhhh----ccCCEEEEecCCC
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRR---VKEE-GTALGAQLV---PLDTLC----AESDFIFVTCALT 1021 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~---~~~~-~~~~g~~~~---~l~ell----~~sDvV~l~lPlt 1021 (1128)
.+.|++|.|+|.|.||..+++.++.+|++|++.++.. .+.+ .++.|+..+ ++.+.+ ...|+|+.++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 4679999999999999999999999999999998765 4433 445565432 211222 3479999888743
Q ss_pred cccccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
+.. + ...+..|+++..+|+++-.
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSCC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEecC
Confidence 322 1 4567788999999998753
No 314
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.78 E-value=0.028 Score=63.54 Aligned_cols=114 Identities=18% Similarity=0.217 Sum_probs=70.6
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchhh--hh-------c----CCcc-cChHhhhccCCEEEEec--C
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEEG--TA-------L----GAQL-VPLDTLCAESDFIFVTC--A 1019 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~~--~~-------~----g~~~-~~l~ell~~sDvV~l~l--P 1019 (1128)
++|+|||.|.+|..+|..+...|. +|+.||....+.+. .+ . .++. .++ +.++.||+|+++. |
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p 93 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVP 93 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 689999999999999999988888 99999987654331 00 0 1222 356 7789999999998 4
Q ss_pred CCcc-cc--------cccC--HHHHccCCCCcEEEEcCCCcccCHHHHHHHH--hcCCceEEE--Ee
Q psy13054 1020 LTKD-TE--------QLIG--RKQFSLMKPTAILVNTSRGGLLDQEALVEFL--KDKKIGGAG--LD 1071 (1128)
Q Consensus 1020 lt~~-T~--------~li~--~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL--~~g~i~gaa--LD 1071 (1128)
..+. |+ .++. .+.+....|++++|+.+-..-+....+.+.- ...++.|.+ ||
T Consensus 94 ~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~t~~~~~~~~~~~~rviG~~t~Ld 160 (328)
T 2hjr_A 94 RKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAMVYYFKEKSGIPANKVCGMSGVLD 160 (328)
T ss_dssp CCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEESCHHHH
T ss_pred CCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHhcCCChhhEEEeCcHHH
Confidence 3221 11 1110 0123333589999998664333333333322 345666663 45
No 315
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=94.75 E-value=0.027 Score=63.53 Aligned_cols=102 Identities=16% Similarity=0.228 Sum_probs=62.9
Q ss_pred CeEEEEEcChhhHHHHHHHh-h-CCCEEE-EEeCCCCchh--hhhcCC-c-ccChHhhhc--cCCEEEEecCCCcccccc
Q psy13054 957 ATVGIVGLGNIGLETAKLLK-A-FKVSKI-LYTSRRVKEE--GTALGA-Q-LVPLDTLCA--ESDFIFVTCALTKDTEQL 1027 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~-a-fG~~Vi-~~d~~~~~~~--~~~~g~-~-~~~l~ell~--~sDvV~l~lPlt~~T~~l 1027 (1128)
.+|||||+|.||+..++.++ . -|++++ ++|+...+.. +...|. . +.++++++. +.|+|++++|.....
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~--- 85 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHP--- 85 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHH---
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHH---
Confidence 47999999999999999987 5 478865 4565544433 334565 2 348999987 699999999943221
Q ss_pred cCHHHHccCCCCc-EEEEc-CCCcccCHHHHHHHHhcC
Q psy13054 1028 IGRKQFSLMKPTA-ILVNT-SRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1028 i~~~~l~~mk~ga-~lIN~-aRG~lVde~aL~~aL~~g 1063 (1128)
.-..+.++.|. +++.- .-..+-+.+.|.++.++.
T Consensus 86 --~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~ 121 (346)
T 3cea_A 86 --EMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSH 121 (346)
T ss_dssp --HHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhC
Confidence 12233445554 44421 111222334566666665
No 316
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=94.72 E-value=0.026 Score=64.38 Aligned_cols=65 Identities=15% Similarity=0.160 Sum_probs=47.3
Q ss_pred CCeEEEEEcChhhHH-HHHHHhhC-CCEEE-EEeCCCCchh--hhhcC-Cc-ccChHhhhccC--CEEEEecCC
Q psy13054 956 GATVGIVGLGNIGLE-TAKLLKAF-KVSKI-LYTSRRVKEE--GTALG-AQ-LVPLDTLCAES--DFIFVTCAL 1020 (1128)
Q Consensus 956 gktvGIIG~G~IG~~-vA~~l~af-G~~Vi-~~d~~~~~~~--~~~~g-~~-~~~l~ell~~s--DvV~l~lPl 1020 (1128)
..+|||||+|.||+. .++.++.. +++++ ++|+...+.. +...+ .. +.++++++... |+|++++|.
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 78 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPP 78 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCc
Confidence 357999999999996 88888876 78877 5565444433 23332 33 35899999865 999999993
No 317
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.66 E-value=0.0065 Score=66.96 Aligned_cols=101 Identities=16% Similarity=0.159 Sum_probs=66.1
Q ss_pred eeCCCCCCCCccccccCCccccceeecccccccc--cccccCCcc-cCHHHHhhcCCEEEEecCCCcccccccCHH--HH
Q psy13054 269 FLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERS--NGTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIGRK--QF 343 (1128)
Q Consensus 269 ilG~g~iG~~va~~~~g~~~~~~~~~g~~~~~~~--~~~~~g~~~-vsLdeLl~~SDiVslh~PLT~~T~~lIn~~--~l 343 (1128)
++|.|.+|+.+++.....+ ..+..+++.... ...+.|++. .+++++++.+|+|++++|-...++.++... .+
T Consensus 5 iiG~G~mG~~~a~~l~~~g---~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~ 81 (296)
T 2gf2_A 5 FIGLGNMGNPMAKNLMKHG---YPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGIL 81 (296)
T ss_dssp EECCSTTHHHHHHHHHHTT---CCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGG
T ss_pred EEeccHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHH
Confidence 6677777777665321111 123344432211 122235554 389999999999999999877777766542 45
Q ss_pred hcCCCCcEEEEecCCCccCHHHHHHHHHc
Q psy13054 344 SLMKPTAILINTSRGGLLDQEALVEFLKD 372 (1128)
Q Consensus 344 ~~MK~gaiLINtaRG~lVDe~AL~~AL~s 372 (1128)
+.++++.++|+++....-+...+.+.+.+
T Consensus 82 ~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 82 KKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp GTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred hcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 67899999999887776666677777765
No 318
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.63 E-value=0.018 Score=64.18 Aligned_cols=61 Identities=11% Similarity=0.162 Sum_probs=49.1
Q ss_pred CHHHHhhcCCEEEEecCCCcccccccCHH--HHhcCCCCcEEEEecCCCccCHHHHHHHHHcC
Q psy13054 313 PLDTLCAESDFIFVTCALTKDTEQLIGRK--QFSLMKPTAILINTSRGGLLDQEALVEFLKDK 373 (1128)
Q Consensus 313 sLdeLl~~SDiVslh~PLT~~T~~lIn~~--~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG 373 (1128)
+++++++.+|+|++++|....++.++... .++.++++.++|+++.+.....+.|.+.+...
T Consensus 79 ~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 141 (316)
T 2uyy_A 79 TPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSR 141 (316)
T ss_dssp CHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 78899999999999999766676665432 35678999999999998766778888888653
No 319
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=94.62 E-value=0.27 Score=55.18 Aligned_cols=94 Identities=14% Similarity=0.162 Sum_probs=70.1
Q ss_pred ccCCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh--h----h----hcCCc---ccChHhhhccCCEEEEec
Q psy13054 953 GLKGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE--G----T----ALGAQ---LVPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 953 ~L~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~----~----~~g~~---~~~l~ell~~sDvV~l~l 1018 (1128)
.+.|.+|++||= +++.+..+..+..||++|.+..|..-.+. . + +.|.. ..+++|.++.+|||..-.
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 378999999998 89999999999999999999887643221 1 1 34533 248999999999999743
Q ss_pred CC-------Ccc-----cccccCHHHHccCCCCcEEEEcC
Q psy13054 1019 AL-------TKD-----TEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1019 Pl-------t~~-----T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
=. .++ ...-++.+.++.+||+++|.-+.
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~l 271 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCL 271 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECS
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCC
Confidence 21 111 12457999999999999998774
No 320
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=94.62 E-value=0.01 Score=65.34 Aligned_cols=100 Identities=21% Similarity=0.218 Sum_probs=63.4
Q ss_pred eeeCCCCCCCCccccc--cCCccccceeecccccccc--cccccCC--c-ccCHHHHhhcCCEEEEecCCCcccccccCH
Q psy13054 268 FFLGPKKNGSQNPKWR--MGSKTDTNHYFGYNWFERS--NGTALGA--Q-LVPLDTLCAESDFIFVTCALTKDTEQLIGR 340 (1128)
Q Consensus 268 ~ilG~g~iG~~va~~~--~g~~~~~~~~~g~~~~~~~--~~~~~g~--~-~vsLdeLl~~SDiVslh~PLT~~T~~lIn~ 340 (1128)
.++|.|.+|+.++... .|.+ ..+..+++.+.. ...+.|. + ..++++++++||+|++++|... ...++..
T Consensus 10 ~iIG~G~mG~~~a~~l~~~g~~---~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~~~ 85 (290)
T 3b1f_A 10 YIAGLGLIGASLALGIKRDHPH---YKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFIKI 85 (290)
T ss_dssp EEECCSHHHHHHHHHHHHHCTT---SEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHHHH
T ss_pred EEEeeCHHHHHHHHHHHhCCCC---cEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHHHH
Confidence 3677777777766531 1111 234445432211 1122344 1 3478889999999999999544 3555532
Q ss_pred HHHhc-CCCCcEEEEecCCCccCHHHHHHHHHc
Q psy13054 341 KQFSL-MKPTAILINTSRGGLLDQEALVEFLKD 372 (1128)
Q Consensus 341 ~~l~~-MK~gaiLINtaRG~lVDe~AL~~AL~s 372 (1128)
.... ++++.++|+++.......+.+.+.+.+
T Consensus 86 -l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~ 117 (290)
T 3b1f_A 86 -LADLDLKEDVIITDAGSTKYEIVRAAEYYLKD 117 (290)
T ss_dssp -HHTSCCCTTCEEECCCSCHHHHHHHHHHHHTT
T ss_pred -HHhcCCCCCCEEEECCCCchHHHHHHHHhccc
Confidence 3456 899999999998877667888888875
No 321
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=94.57 E-value=0.028 Score=62.82 Aligned_cols=61 Identities=18% Similarity=0.199 Sum_probs=41.6
Q ss_pred CeEEEEEcChhhHHHHHHHhh-CCCEEE-EEeCCCCchhhhhcCCcc---cChHhhhccCCEEEEecCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKA-FKVSKI-LYTSRRVKEEGTALGAQL---VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~a-fG~~Vi-~~d~~~~~~~~~~~g~~~---~~l~ell~~sDvV~l~lPl 1020 (1128)
.+|||||+|+||+.+++.++. -+++++ ++|+...+.. ..|+.+ .++.+. .+.|+|++++|.
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~--~~g~~~~~~~~l~~~-~~~DvViiatp~ 75 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVP--FELQPFRVVSDIEQL-ESVDVALVCSPS 75 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------CCTTSCEESSGGGS-SSCCEEEECSCH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHH--HcCCCcCCHHHHHhC-CCCCEEEECCCc
Confidence 579999999999999999976 478877 4665443322 245442 245555 689999999993
No 322
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=94.54 E-value=0.03 Score=65.97 Aligned_cols=104 Identities=10% Similarity=0.085 Sum_probs=70.6
Q ss_pred CCCeEEEEEcChh--hHHHHHHHhh----CCCEEEEEeCCCCchh-hhh---c------CCcc-cChHhhhccCCEEEEe
Q psy13054 955 KGATVGIVGLGNI--GLETAKLLKA----FKVSKILYTSRRVKEE-GTA---L------GAQL-VPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 955 ~gktvGIIG~G~I--G~~vA~~l~a----fG~~Vi~~d~~~~~~~-~~~---~------g~~~-~~l~ell~~sDvV~l~ 1017 (1128)
...+|+|||.|.+ |..+++.+.. .| +|+.||....+.+ ... . .++. .++++.++.||+|+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4568999999998 4788877653 46 9999997654422 110 0 1222 3789999999999999
Q ss_pred cCCC-----------cccccccCH------------------------HHHccCCCCcEEEEcCCCcccCHHHHHHH
Q psy13054 1018 CALT-----------KDTEQLIGR------------------------KQFSLMKPTAILVNTSRGGLLDQEALVEF 1059 (1128)
Q Consensus 1018 lPlt-----------~~T~~li~~------------------------~~l~~mk~ga~lIN~aRG~lVde~aL~~a 1059 (1128)
++-. |.-.|+... +.++...|+|++||.+..-=+-+.++.+.
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~ 159 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKV 159 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHH
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHH
Confidence 9742 444555332 23445568999999988776666666553
No 323
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=94.46 E-value=0.31 Score=55.17 Aligned_cols=99 Identities=16% Similarity=0.170 Sum_probs=70.7
Q ss_pred cCCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh--h--------hhcCCcc---cChHhhhccCCEEEEecC
Q psy13054 954 LKGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE--G--------TALGAQL---VPLDTLCAESDFIFVTCA 1019 (1128)
Q Consensus 954 L~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~--------~~~g~~~---~~l~ell~~sDvV~l~lP 1019 (1128)
+.|++|++||= +++.+..+..+..||++|.+..|..-.+. . +..|... .+++|.++.+|||..-.=
T Consensus 177 l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 177 FKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDVW 256 (340)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECCC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecCc
Confidence 78999999997 57788888889999999998877543221 1 1345332 389999999999986442
Q ss_pred CC----c--c-----cccccCHHHHccCCCCcEEEEcC---CCcccC
Q psy13054 1020 LT----K--D-----TEQLIGRKQFSLMKPTAILVNTS---RGGLLD 1052 (1128)
Q Consensus 1020 lt----~--~-----T~~li~~~~l~~mk~ga~lIN~a---RG~lVd 1052 (1128)
.. . + ...-++.+.++.+|++++|.-+. ||.=|+
T Consensus 257 ~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt 303 (340)
T 4ep1_A 257 MSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCLPAHREEEVT 303 (340)
T ss_dssp ------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECSCCCBTTTBC
T ss_pred cCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCCCCCCCceeC
Confidence 11 0 1 12357999999999999998876 564444
No 324
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=94.39 E-value=0.23 Score=55.94 Aligned_cols=94 Identities=14% Similarity=0.184 Sum_probs=69.2
Q ss_pred ccCCCeEEEEEcC--hhhHHHHHHHhhCCCEEEEEeCCCCchh--h--------hhcCCc---ccChHhhhccCCEEEEe
Q psy13054 953 GLKGATVGIVGLG--NIGLETAKLLKAFKVSKILYTSRRVKEE--G--------TALGAQ---LVPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 953 ~L~gktvGIIG~G--~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~--------~~~g~~---~~~l~ell~~sDvV~l~ 1017 (1128)
.+.|++|++||=| ++.+..+..+..||++|.+..|..-.+. . ++.|.. ..+++|.++.+|||..-
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~ 243 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD 243 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence 3789999999995 9999999999999999998876542221 1 134533 24899999999999973
Q ss_pred cCC-------Ccc-----cccccCHHHHccC-CCCcEEEEcC
Q psy13054 1018 CAL-------TKD-----TEQLIGRKQFSLM-KPTAILVNTS 1046 (1128)
Q Consensus 1018 lPl-------t~~-----T~~li~~~~l~~m-k~ga~lIN~a 1046 (1128)
.=. .++ ...-++++.++.+ ||+++|.-+.
T Consensus 244 ~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~L 285 (325)
T 1vlv_A 244 VWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCL 285 (325)
T ss_dssp CCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred cccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCC
Confidence 321 111 1245689999999 9999998774
No 325
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=94.37 E-value=0.18 Score=57.62 Aligned_cols=93 Identities=14% Similarity=0.161 Sum_probs=67.8
Q ss_pred cCCCeEEEEEcC--hhhHHHHHHHhhCCCEEEEEeCCCCch----h--------hhhcCCc--c-cChHhhhccCCEEEE
Q psy13054 954 LKGATVGIVGLG--NIGLETAKLLKAFKVSKILYTSRRVKE----E--------GTALGAQ--L-VPLDTLCAESDFIFV 1016 (1128)
Q Consensus 954 L~gktvGIIG~G--~IG~~vA~~l~afG~~Vi~~d~~~~~~----~--------~~~~g~~--~-~~l~ell~~sDvV~l 1016 (1128)
+.|++|++||=+ ++.+..+..+..|||+|.+..|..-.+ + +...|.. . .+++|.++.+|||..
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVyt 257 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYT 257 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEe
Confidence 789999999988 788999999999999999887754322 1 1223433 2 389999999999997
Q ss_pred ec--CCCc--c---------cccccCHHHHccCCCCcEEEEcC
Q psy13054 1017 TC--ALTK--D---------TEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1017 ~l--Plt~--~---------T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
-+ +..+ + ...-++.+.++.+|++++|.=+.
T Consensus 258 d~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 258 DVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp CCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred cccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 32 1121 1 11347889999999999888764
No 326
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.34 E-value=0.05 Score=61.51 Aligned_cols=90 Identities=21% Similarity=0.284 Sum_probs=67.7
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc--ChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV--PLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~--~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
.|++|.|+|.|.||...++.++.+|++|++.+....+.+ +++.|+..+ +.+++.+..|+|+-+....+. -..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~-----~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYD-----LKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCC-----HHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHH-----HHH
Confidence 578999999999999999999999999999887766655 566676432 334444478999987774322 235
Q ss_pred HHccCCCCcEEEEcCCCc
Q psy13054 1032 QFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~aRG~ 1049 (1128)
.++.++++..++.++-..
T Consensus 251 ~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 251 YLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp HHTTEEEEEEEEECCCCC
T ss_pred HHHHHhcCCEEEEECCCC
Confidence 677888899998887543
No 327
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=94.32 E-value=0.15 Score=57.16 Aligned_cols=94 Identities=15% Similarity=0.205 Sum_probs=67.5
Q ss_pred ccCCCeEEEEEcC---hhhHHHHHHHhhCCCEEEEEeCCCCchh------hhhcCCcc---cChHhhhccCCEEEEecCC
Q psy13054 953 GLKGATVGIVGLG---NIGLETAKLLKAFKVSKILYTSRRVKEE------GTALGAQL---VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 953 ~L~gktvGIIG~G---~IG~~vA~~l~afG~~Vi~~d~~~~~~~------~~~~g~~~---~~l~ell~~sDvV~l~lPl 1020 (1128)
.+.|++|++||=| ++.+..+..+..||++|.+..|..-.+. +++.|.+. .+++|.++.+|||..-.=-
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 3789999999984 8999999999999999998876543221 12235442 4899999999999974421
Q ss_pred C------ccc-----ccccCHHHHccCCCCcEEEEcC
Q psy13054 1021 T------KDT-----EQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1021 t------~~T-----~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
. ++- ..-++.+.++.+||+++|.-+.
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 1 111 2346888888888888887664
No 328
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=94.30 E-value=0.041 Score=61.88 Aligned_cols=65 Identities=12% Similarity=0.171 Sum_probs=47.9
Q ss_pred CeEEEEEcChhhHHHHHHHhhCC---CEEEE-EeCCCCchh--hhhcCCc--ccChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFK---VSKIL-YTSRRVKEE--GTALGAQ--LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG---~~Vi~-~d~~~~~~~--~~~~g~~--~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.++||||+|.||+..++.++..+ +++++ +|+...+.. ++..++. +.++++++. +.|+|++++|..
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 77 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHP 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcH
Confidence 37999999999999999998764 46655 454433333 3455653 458999997 699999999944
No 329
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=94.29 E-value=0.034 Score=62.85 Aligned_cols=65 Identities=9% Similarity=0.200 Sum_probs=47.0
Q ss_pred CeEEEEEcChhhHH-HHHHHhhC-CCEEEE-EeCCCCchh--hhhcCCc--ccChHhhhcc--CCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLE-TAKLLKAF-KVSKIL-YTSRRVKEE--GTALGAQ--LVPLDTLCAE--SDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~-vA~~l~af-G~~Vi~-~d~~~~~~~--~~~~g~~--~~~l~ell~~--sDvV~l~lPlt 1021 (1128)
.++||||+|.||+. .+..++.. ++++++ +|+...+.. ++++++. +.+++++++. -|+|++++|..
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~ 97 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTS 97 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCc
Confidence 37999999999985 56777665 778775 454444333 4556764 4589999954 79999999943
No 330
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.28 E-value=0.033 Score=59.27 Aligned_cols=64 Identities=17% Similarity=0.190 Sum_probs=41.2
Q ss_pred CeEEEEEcChhhHHHHHH--HhhCCCEEEEE-eCCCCchhhhhcCCc---ccChHhhhccCCEEEEecCC
Q psy13054 957 ATVGIVGLGNIGLETAKL--LKAFKVSKILY-TSRRVKEEGTALGAQ---LVPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~--l~afG~~Vi~~-d~~~~~~~~~~~g~~---~~~l~ell~~sDvV~l~lPl 1020 (1128)
.+++|||+|++|+.+++. ....|++++++ |+.+.+......++. ..++++++++.|+|++++|.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 469999999999999993 45668887765 444333221112222 34788988777999999995
No 331
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=94.26 E-value=0.02 Score=64.94 Aligned_cols=38 Identities=26% Similarity=0.256 Sum_probs=34.3
Q ss_pred CCCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCCCc
Q psy13054 698 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRV 735 (1128)
Q Consensus 698 ~l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~~~ 735 (1128)
.+++++|||||+|+||+.+|+.++..|++|++|++...
T Consensus 13 ~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 13 IIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp HHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred hhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 46789999999999999999999999999999987543
No 332
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.21 E-value=0.026 Score=63.50 Aligned_cols=112 Identities=16% Similarity=0.228 Sum_probs=67.4
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchhhh--hc--CCc-------c-cChHhhhccCCEEEEecCCC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEEGT--AL--GAQ-------L-VPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~~~--~~--g~~-------~-~~l~ell~~sDvV~l~lPlt 1021 (1128)
-++|+|||.|.||..+|..+...|. ++++||....+.... +. ... . .+..+.++.||+|+++.|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 3689999999999999999976564 899999765433211 11 011 0 13456799999999998743
Q ss_pred cccccc-----c--C----H---HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEE
Q psy13054 1022 KDTEQL-----I--G----R---KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGA 1068 (1128)
Q Consensus 1022 ~~T~~l-----i--~----~---~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~ga 1068 (1128)
. ..++ + | . +.+....|++++++.+..-=+....+.+. +...++.|.
T Consensus 86 ~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv~~~~~~~~~~s~~p~~rviG~ 147 (316)
T 1ldn_A 86 Q-KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGS 147 (316)
T ss_dssp C-CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred C-CCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHHHHHHhCCCHHHEEec
Confidence 2 1111 1 0 1 22333468999999866332333333332 223466665
No 333
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=94.19 E-value=0.029 Score=66.45 Aligned_cols=69 Identities=17% Similarity=0.232 Sum_probs=50.5
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhC-CCEEEEEeCCCCchh--hhhcCCcc--------cChHhhhccCCEEEEecCCC
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAF-KVSKILYTSRRVKEE--GTALGAQL--------VPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~af-G~~Vi~~d~~~~~~~--~~~~g~~~--------~~l~ell~~sDvV~l~lPlt 1021 (1128)
.+.+++|+|+|.|.+|+.+++.|... |.+|.+++++..+.. ....++.. .++.++++.+|+|++++|..
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence 67899999999999999999999887 789999987655443 11223321 14567788999999999954
No 334
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=94.18 E-value=0.24 Score=56.07 Aligned_cols=94 Identities=11% Similarity=0.096 Sum_probs=69.6
Q ss_pred ccCCCeEEEEEcC--hhhHHHHHHHhhCCCEEEEEeCCCCchh--h----h----hcCCc---ccChHhhhccCCEEEEe
Q psy13054 953 GLKGATVGIVGLG--NIGLETAKLLKAFKVSKILYTSRRVKEE--G----T----ALGAQ---LVPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 953 ~L~gktvGIIG~G--~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~----~----~~g~~---~~~l~ell~~sDvV~l~ 1017 (1128)
.+.|.+|++||=| ++++..+..+..||++|.+..|..-.+. . + +.|.. ..+++|.++.+|||..-
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 231 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTD 231 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEEC
T ss_pred CcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeC
Confidence 3789999999996 9999999999999999998876543221 1 1 34533 24899999999999973
Q ss_pred cC--CC------cc-----cccccCHHHHccC-CCCcEEEEcC
Q psy13054 1018 CA--LT------KD-----TEQLIGRKQFSLM-KPTAILVNTS 1046 (1128)
Q Consensus 1018 lP--lt------~~-----T~~li~~~~l~~m-k~ga~lIN~a 1046 (1128)
.= .. ++ ...-+|.+.++.+ ||+++|.-+.
T Consensus 232 ~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 232 VWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCL 274 (335)
T ss_dssp CCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEECS
T ss_pred CccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECCC
Confidence 32 01 00 1245799999999 9999998774
No 335
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=94.17 E-value=0.039 Score=62.08 Aligned_cols=101 Identities=19% Similarity=0.277 Sum_probs=64.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEE-EEeCCCCchhhhhcCCc-ccChHhhhccCCEEEEecCCCcccccccCHHHH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKI-LYTSRRVKEEGTALGAQ-LVPLDTLCAESDFIFVTCALTKDTEQLIGRKQF 1033 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi-~~d~~~~~~~~~~~g~~-~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l 1033 (1128)
.+|||||+|+||+.+++.+... +++++ ++|++.++ ... .++. +.++++++.+.|+|+++.|..... +...
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~-----~~~~ 76 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DTK-TPVFDVADVDKHADDVDVLFLCMGSATDI-----PEQA 76 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SSS-SCEEEGGGGGGTTTTCSEEEECSCTTTHH-----HHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hhc-CCCceeCCHHHHhcCCCEEEEcCCcHHHH-----HHHH
Confidence 3799999999999999999776 67765 55655443 211 3443 247888888999999999854321 2234
Q ss_pred ccCCCCcEEEEcCCCcc-c-CH-HHHHHHHhcCC
Q psy13054 1034 SLMKPTAILVNTSRGGL-L-DQ-EALVEFLKDKK 1064 (1128)
Q Consensus 1034 ~~mk~ga~lIN~aRG~l-V-de-~aL~~aL~~g~ 1064 (1128)
..++.|.-+|...-..+ + +. +.|.++.+++.
T Consensus 77 ~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 77 PKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp HHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 55666766665444332 2 22 45566666544
No 336
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=94.15 E-value=0.063 Score=61.60 Aligned_cols=64 Identities=22% Similarity=0.193 Sum_probs=48.3
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhh--hhcC--Ccc---cChHhhhccCCEEEE
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEG--TALG--AQL---VPLDTLCAESDFIFV 1016 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~--~~~g--~~~---~~l~ell~~sDvV~l 1016 (1128)
.+.+++|||+|.|.+|+.+++.++.+|++|+++|+....+.. .+.. ..+ ..+.++++++|+|+.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 468999999999999999999999999999999987654421 1110 011 136678889999865
No 337
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.12 E-value=0.04 Score=57.99 Aligned_cols=37 Identities=22% Similarity=0.367 Sum_probs=30.5
Q ss_pred CCCCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 697 MGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 697 ~~l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
.++.+++|||||+|++|+.+|+++...|.+|.+|++.
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4678899999999999999999999999999999864
No 338
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.12 E-value=0.03 Score=60.88 Aligned_cols=89 Identities=26% Similarity=0.298 Sum_probs=61.3
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCC-------------------Cchh-h----hhc--CCc--c--
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRR-------------------VKEE-G----TAL--GAQ--L-- 1001 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~-------------------~~~~-~----~~~--g~~--~-- 1001 (1128)
.|.+++|.|||+|.+|..+++.|...|. ++.++|... .+.+ . .+. +++ .
T Consensus 25 ~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 25 KLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 6899999999999999999999999997 666776543 1111 0 000 111 1
Q ss_pred -----cChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEc
Q psy13054 1002 -----VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNT 1045 (1128)
Q Consensus 1002 -----~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~ 1045 (1128)
..++++++++|+|+.+.. +.+++.++++...+. +.-+|..
T Consensus 105 ~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~ 149 (251)
T 1zud_1 105 QRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITA 149 (251)
T ss_dssp SCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEE
T ss_pred ccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEE
Confidence 135578889999999887 677888888765553 3335554
No 339
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.12 E-value=0.082 Score=59.57 Aligned_cols=114 Identities=18% Similarity=0.215 Sum_probs=71.5
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh--h---hh------cCCcc--cChHhhhccCCEEEEecCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE--G---TA------LGAQL--VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~--~---~~------~g~~~--~~l~ell~~sDvV~l~lPl 1020 (1128)
..++|+|||.|.+|..+|..+..-|+ +++.+|....+.+ . .+ ...+. .+-.+.++.||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 45789999999999999999977666 9999998776542 1 11 11111 2335789999999998753
Q ss_pred Ccccccc-----c--CH-------HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEEE
Q psy13054 1021 TKDTEQL-----I--GR-------KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGAG 1069 (1128)
Q Consensus 1021 t~~T~~l-----i--~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~gaa 1069 (1128)
+...++ + |. +.+....|++++|+++-.-=+....+.+. +...++.|.+
T Consensus 84 -p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 84 -PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp -CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred -CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHhcCCCHHHEEeec
Confidence 222222 1 11 12344458999999964433333444343 2234666765
No 340
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=94.12 E-value=0.034 Score=65.18 Aligned_cols=67 Identities=16% Similarity=0.255 Sum_probs=48.6
Q ss_pred CCCeEEEEEcChhhH-HHHHHHhhC-CCEEE-EEeCCCCchh--hhhcCCc------ccChHhhhc--cCCEEEEecCCC
Q psy13054 955 KGATVGIVGLGNIGL-ETAKLLKAF-KVSKI-LYTSRRVKEE--GTALGAQ------LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~-~vA~~l~af-G~~Vi-~~d~~~~~~~--~~~~g~~------~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.-.+|||||+|.||+ .+++.++.. +++++ ++|+...+.. ....++. +.++++++. +.|+|++++|..
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~ 161 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNS 161 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGG
T ss_pred CceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCch
Confidence 335799999999997 899988765 67765 5555443332 3344553 458999997 799999999943
No 341
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=94.11 E-value=0.24 Score=55.70 Aligned_cols=95 Identities=14% Similarity=0.073 Sum_probs=67.5
Q ss_pred ccCCCeEEEEEcC-hhhHHHHHHHhhCCCEEEEEeCCCCch--hhh--------hcCC--c-ccChHhhhccCCEEEEec
Q psy13054 953 GLKGATVGIVGLG-NIGLETAKLLKAFKVSKILYTSRRVKE--EGT--------ALGA--Q-LVPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 953 ~L~gktvGIIG~G-~IG~~vA~~l~afG~~Vi~~d~~~~~~--~~~--------~~g~--~-~~~l~ell~~sDvV~l~l 1018 (1128)
.+.|.+|++||=| ++.+..+..+..||++|.+..|..-.+ ... +.|. + ..+++|.++.+|||..-+
T Consensus 152 ~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 152 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 231 (321)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEec
Confidence 3789999999985 588888888889999999988765421 111 2343 3 248999999999999833
Q ss_pred ----CCCcc--------cccccCHHHHccCCCCcEEEEcCC
Q psy13054 1019 ----ALTKD--------TEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1019 ----Plt~~--------T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
....+ ...-++.+.++.+||+++|.-+.-
T Consensus 232 w~s~g~e~~~~~~~~~~~~y~v~~~~l~~a~~dai~mH~lP 272 (321)
T 1oth_A 232 WISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLP 272 (321)
T ss_dssp SSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSC
T ss_pred cccccchhhhHHHHHhccCceECHHHHhhcCCCCEEECCCC
Confidence 21111 113468899999999999887743
No 342
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.09 E-value=0.059 Score=60.89 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=72.5
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchhh----hhcC-------Ccc-cChHhhhccCCEEEEecCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEEG----TALG-------AQL-VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~~----~~~g-------~~~-~~l~ell~~sDvV~l~lPl 1020 (1128)
..++|+|||.|.||..+|..|...|. +++++|....+.+. ...+ ++. .+..+.++.||+|+++.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 35789999999999999999987776 89999976543321 1111 111 1235688999999999863
Q ss_pred Ccccccc-----c--CH-------HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEE--EEe
Q psy13054 1021 TKDTEQL-----I--GR-------KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGA--GLD 1071 (1128)
Q Consensus 1021 t~~T~~l-----i--~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~ga--aLD 1071 (1128)
+...++ + |. +.+....|++++++++-.-=+....+.+. +...++.|. -||
T Consensus 84 -p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~~t~~~~k~~g~p~~rviG~gt~LD 151 (326)
T 3pqe_A 84 -NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDILTYATWKFSGLPKERVIGSGTTLD 151 (326)
T ss_dssp -CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHH
T ss_pred -CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHHHHHHHHHhcCCCHHHEEeeccccH
Confidence 322222 1 11 23445578999999986544444444443 223455554 355
No 343
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=94.09 E-value=0.073 Score=59.83 Aligned_cols=112 Identities=14% Similarity=0.207 Sum_probs=71.2
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh--hhh---------cCCcc--cChHhhhccCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE--GTA---------LGAQL--VPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~--~~~---------~g~~~--~~l~ell~~sDvV~l~lPlt 1021 (1128)
.+|+|||.|.||..+|..+...|+ +++.+|....+.. +.+ ..... .+..+.++.||+|+++.+..
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 379999999999999999977676 8999998775533 111 11122 25678899999999987643
Q ss_pred cccccc-----c--CH-------HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEEE
Q psy13054 1022 KDTEQL-----I--GR-------KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGAG 1069 (1128)
Q Consensus 1022 ~~T~~l-----i--~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~gaa 1069 (1128)
...++ + |. +.+....|++++||++-.-=+....+.+. +...++.|.+
T Consensus 81 -~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~~k~~g~p~~rviG~~ 143 (314)
T 3nep_X 81 -RSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYEASGFPTNRVMGMA 143 (314)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHHHHHHTCCGGGEEECC
T ss_pred -CCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHHHHHHHhcCCChHHEEeec
Confidence 22222 1 11 23455678999999986544444444443 1234666765
No 344
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.06 E-value=0.064 Score=60.97 Aligned_cols=90 Identities=26% Similarity=0.251 Sum_probs=66.0
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-------ChHh-hhccCCEEEEecCCC-ccc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-------PLDT-LCAESDFIFVTCALT-KDT 1024 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-------~l~e-ll~~sDvV~l~lPlt-~~T 1024 (1128)
.|++|.|+|.|.||...++.++.+|++|++.+....+.+ +++.|+..+ ++.+ +....|+|+.+++.+ ++
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~- 257 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDI- 257 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHH-
Confidence 578999999999999999999999999999987666554 555665432 2222 224689999988752 11
Q ss_pred ccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1025 EQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1025 ~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
.+ ...++.|+++..+|.++..
T Consensus 258 --~~-~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 258 --DF-NIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp --CT-TTGGGGEEEEEEEEECCCC
T ss_pred --HH-HHHHHHhcCCCEEEEecCC
Confidence 12 2457788999999988754
No 345
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=94.05 E-value=0.047 Score=62.22 Aligned_cols=65 Identities=15% Similarity=0.185 Sum_probs=46.6
Q ss_pred CeEEEEEcChhhHH-HHHHHhhC-CCEEEEEeCCCCchhhhhc-CCc-ccChHhhhcc--CCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLE-TAKLLKAF-KVSKILYTSRRVKEEGTAL-GAQ-LVPLDTLCAE--SDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~-vA~~l~af-G~~Vi~~d~~~~~~~~~~~-g~~-~~~l~ell~~--sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+. .++.++.. +++++++.++......... +.. +.++++++.. .|+|++++|..
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDN 76 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGG
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChH
Confidence 47999999999997 77777766 7887754433333223333 443 3589999987 89999999943
No 346
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.96 E-value=0.032 Score=59.37 Aligned_cols=84 Identities=18% Similarity=0.212 Sum_probs=56.6
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc--------ChHhh-hccCCEEEEecCCCcccc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV--------PLDTL-CAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~--------~l~el-l~~sDvV~l~lPlt~~T~ 1025 (1128)
.+++.|+|+|.+|+.+|+.|...|. |+++++...... .. .++... .|+++ +.++|.|++++|..+.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n- 85 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSET- 85 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHH-
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHH-
Confidence 4579999999999999999999999 999986655433 22 343321 23333 78899999999865443
Q ss_pred cccCHHHHccCCCCcEEE
Q psy13054 1026 QLIGRKQFSLMKPTAILV 1043 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lI 1043 (1128)
+.-....+.+.++..+|
T Consensus 86 -~~~~~~a~~~~~~~~ii 102 (234)
T 2aef_A 86 -IHCILGIRKIDESVRII 102 (234)
T ss_dssp -HHHHHHHHHHCSSSEEE
T ss_pred -HHHHHHHHHHCCCCeEE
Confidence 33334455566664444
No 347
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=93.94 E-value=0.12 Score=59.83 Aligned_cols=94 Identities=12% Similarity=0.085 Sum_probs=69.0
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHcc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSL 1035 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~ 1035 (1128)
-.++-|+|.|.+|+++++.++.+|++|+++|++..... .+-+..+|-++...| .+.+..
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~-----------~~~fp~a~~~~~~~p----------~~~~~~ 262 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFAT-----------TARFPTADEVVVDWP----------HRYLAA 262 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSC-----------TTTCSSSSEEEESCH----------HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcc-----------cccCCCceEEEeCCh----------HHHHHh
Confidence 34799999999999999999999999999998875321 112345554444433 122222
Q ss_pred ------CCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEE
Q psy13054 1036 ------MKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGL 1070 (1128)
Q Consensus 1036 ------mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaL 1070 (1128)
+.+++++|=+.++.-.|...|..+|+++..++.|+
T Consensus 263 ~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG~ 303 (386)
T 2we8_A 263 QAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGA 303 (386)
T ss_dssp HHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEEE
T ss_pred hccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEEE
Confidence 67888888899999999999999999874455443
No 348
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=93.88 E-value=0.047 Score=61.90 Aligned_cols=66 Identities=17% Similarity=0.160 Sum_probs=46.3
Q ss_pred CeEEEEEcChhhHH-HHHHHhhC-CCEEEEE-eCCCCchhhhhcCCc-ccChHhhhcc--CCEEEEecCCCc
Q psy13054 957 ATVGIVGLGNIGLE-TAKLLKAF-KVSKILY-TSRRVKEEGTALGAQ-LVPLDTLCAE--SDFIFVTCALTK 1022 (1128)
Q Consensus 957 ktvGIIG~G~IG~~-vA~~l~af-G~~Vi~~-d~~~~~~~~~~~g~~-~~~l~ell~~--sDvV~l~lPlt~ 1022 (1128)
.+|||||+|.||+. .++.++.. +++++++ |+...+......+.. +.++++++.. .|+|++++|...
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 79 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDT 79 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTT
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHH
Confidence 47999999999997 78888776 7887744 433322221112333 3589999976 899999999543
No 349
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.86 E-value=0.07 Score=60.38 Aligned_cols=64 Identities=25% Similarity=0.276 Sum_probs=45.9
Q ss_pred eEEEEEcChhhHHHHHHHhhC-CCEEEEEeCCCCchh---hhhcCC------------------c-ccChHhhhccCCEE
Q psy13054 958 TVGIVGLGNIGLETAKLLKAF-KVSKILYTSRRVKEE---GTALGA------------------Q-LVPLDTLCAESDFI 1014 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~af-G~~Vi~~d~~~~~~~---~~~~g~------------------~-~~~l~ell~~sDvV 1014 (1128)
+|||+|+|.||+.+++.+... ++++++..++..+.. .+..|+ . ..+.++++...|+|
T Consensus 4 rVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV 83 (334)
T 2czc_A 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDII 83 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEE
T ss_pred EEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCEE
Confidence 799999999999999999765 577766654433221 222222 1 23688888899999
Q ss_pred EEecCCC
Q psy13054 1015 FVTCALT 1021 (1128)
Q Consensus 1015 ~l~lPlt 1021 (1128)
+.++|..
T Consensus 84 ~~aTp~~ 90 (334)
T 2czc_A 84 VDATPGG 90 (334)
T ss_dssp EECCSTT
T ss_pred EECCCcc
Confidence 9999954
No 350
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.85 E-value=0.12 Score=60.98 Aligned_cols=99 Identities=19% Similarity=0.283 Sum_probs=71.7
Q ss_pred ccCCCeEEEEEcC----------hhhHHHHHHHhhCCCEEEEEeCCCCchhhhhc-CCccc-ChHhhhccCCEEEEecCC
Q psy13054 953 GLKGATVGIVGLG----------NIGLETAKLLKAFKVSKILYTSRRVKEEGTAL-GAQLV-PLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 953 ~L~gktvGIIG~G----------~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~-g~~~~-~l~ell~~sDvV~l~lPl 1020 (1128)
.+.|++|+|+|+. .-...+++.|...|++|.+|||.........+ ++.++ ++++.++.+|+|+++.+-
T Consensus 319 ~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~~ 398 (446)
T 4a7p_A 319 DVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIVTEW 398 (446)
T ss_dssp CCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEECSCC
T ss_pred cCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEeeCC
Confidence 5789999999997 66899999999999999999998753222222 45554 688999999999998875
Q ss_pred CcccccccCHHHHc-cCCCCcEEEEcCCCcccCHHHH
Q psy13054 1021 TKDTEQLIGRKQFS-LMKPTAILVNTSRGGLLDQEAL 1056 (1128)
Q Consensus 1021 t~~T~~li~~~~l~-~mk~ga~lIN~aRG~lVde~aL 1056 (1128)
.+ -+. ++.+.+. .|+ +.+++++ |+- .|.+.+
T Consensus 399 ~~-f~~-~d~~~~~~~~~-~~~i~D~-r~~-~~~~~~ 430 (446)
T 4a7p_A 399 DA-FRA-LDLTRIKNSLK-SPVLVDL-RNI-YPPAEL 430 (446)
T ss_dssp TT-TTS-CCHHHHHTTBS-SCBEECS-SCC-SCHHHH
T ss_pred HH-hhc-CCHHHHHHhcC-CCEEEEC-CCC-CCHHHH
Confidence 43 332 4655554 465 4678875 654 455544
No 351
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.85 E-value=0.061 Score=59.93 Aligned_cols=95 Identities=14% Similarity=0.205 Sum_probs=61.0
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh--hh--hcCC------c--ccChHhhhccCCEEEEecCCC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE--GT--ALGA------Q--LVPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~--~~--~~g~------~--~~~l~ell~~sDvV~l~lPlt 1021 (1128)
.++|+|||.|.+|..+|..|...|. +|.++|....+.. .. ..+. . ..+-.+.++.+|+|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~ 86 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPR 86 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCC
Confidence 3589999999999999999988888 9999987643322 11 1121 1 111235678999999999632
Q ss_pred ccccc------------ccC--HHHHccCCCCcEEEEcCCCccc
Q psy13054 1022 KDTEQ------------LIG--RKQFSLMKPTAILVNTSRGGLL 1051 (1128)
Q Consensus 1022 ~~T~~------------li~--~~~l~~mk~ga~lIN~aRG~lV 1051 (1128)
...+ ++. .+.++...+++++|+++-|--+
T Consensus 87 -~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 87 -QKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDI 129 (319)
T ss_dssp -CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHH
T ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHH
Confidence 2211 110 1122333689999998776533
No 352
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=93.82 E-value=0.071 Score=59.14 Aligned_cols=104 Identities=14% Similarity=0.103 Sum_probs=66.0
Q ss_pred CCeEEEEEc-ChhhHHHHHHHhhCCCEEE-EEeCCCCchhhhhcCCcc-cChHhhhc--cCCEEEEecCCCcccccccCH
Q psy13054 956 GATVGIVGL-GNIGLETAKLLKAFKVSKI-LYTSRRVKEEGTALGAQL-VPLDTLCA--ESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 956 gktvGIIG~-G~IG~~vA~~l~afG~~Vi-~~d~~~~~~~~~~~g~~~-~~l~ell~--~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
..+|+|+|+ |++|+.+++.++..|++++ .+||..... ...|+.. .+++++.. ..|++++++|. +....++.
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~--~~~G~~vy~sl~el~~~~~~D~viI~tP~-~~~~~~~~- 82 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT--THLGLPVFNTVREAVAATGATASVIYVPA-PFCKDSIL- 82 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCG-GGHHHHHH-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc--eeCCeeccCCHHHHhhcCCCCEEEEecCH-HHHHHHHH-
Confidence 467999999 9999999999998899854 444432101 1245543 48999988 89999999994 33333332
Q ss_pred HHHccCCCCcEEEEcCCCc-ccCHHHHHHHHhcCCc
Q psy13054 1031 KQFSLMKPTAILVNTSRGG-LLDQEALVEFLKDKKI 1065 (1128)
Q Consensus 1031 ~~l~~mk~ga~lIN~aRG~-lVde~aL~~aL~~g~i 1065 (1128)
+.++ ..... +|..+-|- .-+.+.|.++.++..+
T Consensus 83 ea~~-~Gi~~-iVi~t~G~~~~~~~~l~~~A~~~gv 116 (288)
T 2nu8_A 83 EAID-AGIKL-IITITEGIPTLDMLTVKVKLDEAGV 116 (288)
T ss_dssp HHHH-TTCSE-EEECCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCC
Confidence 2222 22232 34444443 2345588888877655
No 353
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.81 E-value=0.068 Score=59.83 Aligned_cols=110 Identities=21% Similarity=0.219 Sum_probs=66.1
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchhh--hh--c-------C--Ccc-cChHhhhccCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEEG--TA--L-------G--AQL-VPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~~--~~--~-------g--~~~-~~l~ell~~sDvV~l~lPlt 1021 (1128)
++|+|||.|.+|..+|..+...|. +|+.+|....+.+. .+ . . +.. .+. +.++.||+|+++.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~- 80 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGA- 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCC-
Confidence 589999999999999999988886 89999876543321 11 1 1 122 355 678999999999853
Q ss_pred cccccc-----c--C----H---HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEE
Q psy13054 1022 KDTEQL-----I--G----R---KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGA 1068 (1128)
Q Consensus 1022 ~~T~~l-----i--~----~---~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~ga 1068 (1128)
|...++ + | . +.+....|++++|+.+-.-=+....+.+. +...++.|.
T Consensus 81 p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~~~~~~~~~~~rviG~ 143 (309)
T 1ur5_A 81 PRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAEVSGFPKERVIGQ 143 (309)
T ss_dssp --------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHHHHHHHHHcCCCHHHEEEC
Confidence 222221 0 1 1 22334458999999855332223333232 223356665
No 354
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.80 E-value=0.1 Score=58.56 Aligned_cols=116 Identities=18% Similarity=0.173 Sum_probs=69.3
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh--hhh--cCC------cc-cChHhhhccCCEEEEecCCCc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE--GTA--LGA------QL-VPLDTLCAESDFIFVTCALTK 1022 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~--~~~--~g~------~~-~~l~ell~~sDvV~l~lPlt~ 1022 (1128)
..+|+|||.|.+|..++-.+...|. +++++|....+.+ ..+ ... +. .+-.+.++.||+|+++.+..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p- 85 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN- 85 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCC-
Confidence 3689999999999999999988777 9999997764432 111 111 11 12356799999999999843
Q ss_pred ccccc-------cC----H---HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEEE--Eec
Q psy13054 1023 DTEQL-------IG----R---KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGAG--LDV 1072 (1128)
Q Consensus 1023 ~T~~l-------i~----~---~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~gaa--LDV 1072 (1128)
...++ .| . +.+....|++++||.+-.-=+....+.+. +...++.|.+ ||+
T Consensus 86 ~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~~k~s~~p~~rviG~gt~Ld~ 153 (318)
T 1y6j_A 86 RKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMIQKWSGLPVGKVIGSGTVLDS 153 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHHHHHHTCCTTTEEECTTHHHH
T ss_pred CCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHcCCCHHHEeccCCchHH
Confidence 32222 01 0 12333468999999754433344444444 3445777763 563
No 355
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=93.80 E-value=0.054 Score=61.68 Aligned_cols=65 Identities=22% Similarity=0.310 Sum_probs=47.2
Q ss_pred CeEEEEEcChhhHH-HHHHHhhC-CCEEEEEeCCCCchhhhhc-CCc-ccChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLE-TAKLLKAF-KVSKILYTSRRVKEEGTAL-GAQ-LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~-vA~~l~af-G~~Vi~~d~~~~~~~~~~~-g~~-~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+. .++.++.. +++++++.++......... +.. +.++++++. +.|+|++++|..
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 76 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSG 76 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcH
Confidence 47999999999997 67878766 7888755444332223333 443 358999998 789999999954
No 356
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=93.74 E-value=0.14 Score=63.94 Aligned_cols=133 Identities=15% Similarity=0.169 Sum_probs=88.9
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhh---------------c-------CCcccChHhhhccCC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTA---------------L-------GAQLVPLDTLCAESD 1012 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~---------------~-------g~~~~~l~ell~~sD 1012 (1128)
=++|||||.|.||..+|..+...|++|+++|....... ... . .....+-.+.++.||
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD 395 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVD 395 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCS
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCC
Confidence 47899999999999999999999999999997654221 000 0 011222334578999
Q ss_pred EEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEeccCCCCCCCCCccccCCCeEE
Q psy13054 1013 FIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCVL 1092 (1128)
Q Consensus 1013 vV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLDV~e~EPl~~~~pL~~~pNvil 1092 (1128)
+|+=++|.+-+.++=+=++.=+.++++++|-....+ +....|.++++. +=..+++=-|.+-| --||.. ||-
T Consensus 396 lVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~~-p~r~ig~HFfnP~~---~m~LVE---vi~ 466 (742)
T 3zwc_A 396 LVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTDR-PQLVIGTHFFSPAH---VMRLLE---VIP 466 (742)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSSC-GGGEEEEECCSSTT---TCCEEE---EEE
T ss_pred EEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcCC-ccccccccccCCCC---CCceEE---Eec
Confidence 999999998887765545666778999998765444 455667766543 33455666554322 234443 566
Q ss_pred CCCCC
Q psy13054 1093 TPHTS 1097 (1128)
Q Consensus 1093 TPHia 1097 (1128)
+|+.+
T Consensus 467 g~~Ts 471 (742)
T 3zwc_A 467 SRYSS 471 (742)
T ss_dssp CSSCC
T ss_pred CCCCC
Confidence 66644
No 357
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=93.74 E-value=0.23 Score=56.10 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=69.1
Q ss_pred cCCCeEEEEEcC--hhhHHHHHHHhhCCCEEEEEeCCCCchh--h--------hhcCCc---ccChHhhhccCCEEEEec
Q psy13054 954 LKGATVGIVGLG--NIGLETAKLLKAFKVSKILYTSRRVKEE--G--------TALGAQ---LVPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 954 L~gktvGIIG~G--~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~--------~~~g~~---~~~l~ell~~sDvV~l~l 1018 (1128)
+.|.+|++||=| ++.+..+..+..||++|.+..|..-.+. . ++.|.. ..+++|.++.+|||..-.
T Consensus 153 l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~ 232 (333)
T 1duv_G 153 FNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDV 232 (333)
T ss_dssp GGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCC
Confidence 789999999986 9999999999999999998876543221 1 144533 248999999999999733
Q ss_pred C--CC------cc-----cccccCHHHHccC-CCCcEEEEcC
Q psy13054 1019 A--LT------KD-----TEQLIGRKQFSLM-KPTAILVNTS 1046 (1128)
Q Consensus 1019 P--lt------~~-----T~~li~~~~l~~m-k~ga~lIN~a 1046 (1128)
= .. ++ ...-++.+.++.+ ||+++|.-+.
T Consensus 233 w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHcL 274 (333)
T 1duv_G 233 WVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCL 274 (333)
T ss_dssp SSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEECS
T ss_pred ccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECCC
Confidence 3 01 01 1245799999999 9999998774
No 358
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=93.70 E-value=0.45 Score=53.49 Aligned_cols=94 Identities=13% Similarity=0.103 Sum_probs=67.0
Q ss_pred ccCCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh--h--------hhcCCc--c-cChHhhhccCCEEEEec
Q psy13054 953 GLKGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE--G--------TALGAQ--L-VPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 953 ~L~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~--------~~~g~~--~-~~l~ell~~sDvV~l~l 1018 (1128)
.+.|++|++||= +++.+..+..+..+|++|.+..|..-.+. . ...|.. . .+++|.++.+|||..-.
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence 378999999997 57888888889999999998877543221 1 123432 2 38999999999998643
Q ss_pred CCC-------cc-----cccccCHHHHccCCCCcEEEEcC
Q psy13054 1019 ALT-------KD-----TEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1019 Plt-------~~-----T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
=-. ++ ...-++.+.++.+|++++|.-+.
T Consensus 234 wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 234 WTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL 273 (323)
T ss_dssp CC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECS
T ss_pred eecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC
Confidence 110 11 12357999999999999998764
No 359
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.70 E-value=0.051 Score=60.33 Aligned_cols=50 Identities=18% Similarity=0.106 Sum_probs=33.8
Q ss_pred hhhhhhhcCccccccccccCCccCCCCCCEEEEEe-cChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 674 EGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVG-LGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 674 ~~~~~~r~G~W~~~~~~~~~~~~~~l~gktvGIiG-~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
+.++..++..|..-. ...++||||| +|+||+.+|+.++..|.+|.+|++.
T Consensus 4 ~~~~~~~~~~~~~~~----------~~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 4 ESYANENQFGFKTIN----------SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp ---------CCCCSC----------TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred hHHhhhhccCccccC----------CCCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 344566677785321 1357899999 9999999999999999999999864
No 360
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=93.69 E-value=0.41 Score=54.49 Aligned_cols=95 Identities=15% Similarity=0.152 Sum_probs=68.9
Q ss_pred ccCCCeEEEEEcC--hhhHHHHHHHhhCCCEEEEEeCCCCchh--h--------hhcCCc---ccChHhhhccCCEEEEe
Q psy13054 953 GLKGATVGIVGLG--NIGLETAKLLKAFKVSKILYTSRRVKEE--G--------TALGAQ---LVPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 953 ~L~gktvGIIG~G--~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~--------~~~g~~---~~~l~ell~~sDvV~l~ 1017 (1128)
.+.|.+|++||=| ++.+..+..+..||++|.+..|..-.+. . ++.|.+ ..+++|.++.+|||..-
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd 252 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTD 252 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEc
Confidence 3789999999996 9999999999999999998876543221 1 134533 24899999999999973
Q ss_pred cC--CC----cc-----cccccCHHHHccCC---CCcEEEEcCC
Q psy13054 1018 CA--LT----KD-----TEQLIGRKQFSLMK---PTAILVNTSR 1047 (1128)
Q Consensus 1018 lP--lt----~~-----T~~li~~~~l~~mk---~ga~lIN~aR 1047 (1128)
.= .. ++ ...-++.+.++.+| ++++|.-+.-
T Consensus 253 ~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHcLP 296 (359)
T 2w37_A 253 VWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHCLP 296 (359)
T ss_dssp CSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEECSC
T ss_pred ccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECCCC
Confidence 32 01 01 12456888888888 8888887643
No 361
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=93.68 E-value=0.079 Score=60.18 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=44.0
Q ss_pred eEEEEEcChhhHHHHHHHhhC-CCEEEEEeCCCCchh---hhhcCCccc------------------ChHhhhccCCEEE
Q psy13054 958 TVGIVGLGNIGLETAKLLKAF-KVSKILYTSRRVKEE---GTALGAQLV------------------PLDTLCAESDFIF 1015 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~af-G~~Vi~~d~~~~~~~---~~~~g~~~~------------------~l~ell~~sDvV~ 1015 (1128)
+|||+|+|+||+.+++.+... ++++++..++..... +...++... ++++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999999754 678877665543221 222222211 3445667899999
Q ss_pred EecCCC
Q psy13054 1016 VTCALT 1021 (1128)
Q Consensus 1016 l~lPlt 1021 (1128)
.|+|..
T Consensus 83 ~aTp~~ 88 (340)
T 1b7g_O 83 DTTPNG 88 (340)
T ss_dssp ECCSTT
T ss_pred ECCCCc
Confidence 999954
No 362
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=93.68 E-value=0.072 Score=60.78 Aligned_cols=65 Identities=14% Similarity=0.326 Sum_probs=46.2
Q ss_pred CeEEEEEcChhhHH-HHHHHhhC-CCEEEEEeCCCCchhhhhc-CCc-ccChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLE-TAKLLKAF-KVSKILYTSRRVKEEGTAL-GAQ-LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~-vA~~l~af-G~~Vi~~d~~~~~~~~~~~-g~~-~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+. .++.++.. +++++++.++......... +.. +.++++++. +.|+|++++|..
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNA 78 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGG
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChH
Confidence 47999999999997 77777766 7887754433332222222 343 358999998 789999999953
No 363
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=93.67 E-value=0.13 Score=60.31 Aligned_cols=109 Identities=15% Similarity=0.148 Sum_probs=75.6
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCC--------chh-------------------hhhcCCcccChH
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRV--------KEE-------------------GTALGAQLVPLD 1005 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~--------~~~-------------------~~~~g~~~~~l~ 1005 (1128)
++.|+||.|=|+|++|...|+.|...|++|++.++... ..+ ..+.+.++.+-+
T Consensus 232 ~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~~~ 311 (450)
T 4fcc_A 232 GFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLEGQ 311 (450)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEETC
T ss_pred CcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEecCc
Confidence 48899999999999999999999999999987654321 100 111233444334
Q ss_pred hhh-ccCCEEEEecCCCcccccccCHHHHccCCCC--cEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1006 TLC-AESDFIFVTCALTKDTEQLIGRKQFSLMKPT--AILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1006 ell-~~sDvV~l~lPlt~~T~~li~~~~l~~mk~g--a~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
+++ -.|||.+=|. +.+.|+.+...+++.. .++++-+-+.+- .+| .+.|.+..|..+
T Consensus 312 ~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t-~eA-~~iL~~rGIl~~ 370 (450)
T 4fcc_A 312 QPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTT-IEA-TELFQQAGVLFA 370 (450)
T ss_dssp CGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBC-HHH-HHHHHHTTCEEE
T ss_pred ccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCC-HHH-HHHHHHCCCEEE
Confidence 433 3699988553 4567999888888754 578888888754 444 366777777655
No 364
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=93.64 E-value=0.054 Score=63.89 Aligned_cols=67 Identities=15% Similarity=0.182 Sum_probs=49.6
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--hhhcC-Cc-----c---cChHhhhccCCEEEEecCCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--GTALG-AQ-----L---VPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~~~~g-~~-----~---~~l~ell~~sDvV~l~lPlt 1021 (1128)
.+++|+|+|.|.||+.+++.|...|.+|.+++++..+.. ....+ +. . .+++++++.+|+|++++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 478999999999999999999999999999987654433 11111 11 1 13557788999999999964
No 365
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.62 E-value=0.069 Score=61.05 Aligned_cols=89 Identities=28% Similarity=0.415 Sum_probs=65.7
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc----C---hHhhhccCCEEEEecCCCccccc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV----P---LDTLCAESDFIFVTCALTKDTEQ 1026 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~----~---l~ell~~sDvV~l~lPlt~~T~~ 1026 (1128)
.|.+|.|+|.|.||...++.++.+|++|++.+....+.+ +++.|+..+ + ++++....|+|+.++.....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~--- 270 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHN--- 270 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHH---
Confidence 578999999999999999999999999998887665544 555665432 1 23334568999988874321
Q ss_pred ccCHHHHccCCCCcEEEEcCCC
Q psy13054 1027 LIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1027 li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
+ ...++.|+++..+|.++-.
T Consensus 271 -~-~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 271 -L-DDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp -H-HHHHTTEEEEEEEEECCCC
T ss_pred -H-HHHHHHhccCCEEEEeccC
Confidence 1 3567888999999988754
No 366
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.61 E-value=0.059 Score=61.57 Aligned_cols=66 Identities=21% Similarity=0.105 Sum_probs=47.2
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCc--------ccChHhhhccCCEEEEecCCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQ--------LVPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~--------~~~l~ell~~sDvV~l~lPlt 1021 (1128)
+.++|+|+|.|.+|+.+|+.|.. ..+|.++|....+.+....... ..++.++++++|+|++++|..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 44579999999999999999976 4688888865544331111111 124778899999999999954
No 367
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=93.61 E-value=0.07 Score=60.30 Aligned_cols=118 Identities=14% Similarity=0.106 Sum_probs=70.6
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh--hhh--c------CCcc-cChHhhhccCCEEEEecCC
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE--GTA--L------GAQL-VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~--~~~--~------g~~~-~~l~ell~~sDvV~l~lPl 1020 (1128)
-.+++|+|||.|.||..+|..+...|. +++++|....+.. +.+ . ..+. .+..+.++.||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 356799999999999999999987776 8999997554332 111 1 1111 2446789999999998753
Q ss_pred Cc---ccc-ccc--CH-------HHHccCCCCcEEEEcCCCcccCHHHHHHHH--hcCCceEE--EEe
Q psy13054 1021 TK---DTE-QLI--GR-------KQFSLMKPTAILVNTSRGGLLDQEALVEFL--KDKKIGGA--GLD 1071 (1128)
Q Consensus 1021 t~---~T~-~li--~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~aL--~~g~i~ga--aLD 1071 (1128)
.. +|| .++ |. +.+....|++++++++-.-=+....+.+.- ...++.|. .||
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~~k~~g~p~~rviG~gt~LD 154 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGSGTSLD 154 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchHHHHHHHHHhcCCCHHHeeeecccCc
Confidence 21 122 122 11 234556789999999754333333333321 22355554 356
No 368
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=93.55 E-value=0.62 Score=52.52 Aligned_cols=94 Identities=14% Similarity=0.214 Sum_probs=67.2
Q ss_pred ccCCCeEEEEEcC--hhhHHHHHHHhhCCCEEEEEeCCCCc--hh------hh----h--cCCc--c-cChHhhhccCCE
Q psy13054 953 GLKGATVGIVGLG--NIGLETAKLLKAFKVSKILYTSRRVK--EE------GT----A--LGAQ--L-VPLDTLCAESDF 1013 (1128)
Q Consensus 953 ~L~gktvGIIG~G--~IG~~vA~~l~afG~~Vi~~d~~~~~--~~------~~----~--~g~~--~-~~l~ell~~sDv 1013 (1128)
.+.|++|++||=+ ++.+..+..+..||++|.+..|..-. +. +. . .|.. . .+++|.++.+||
T Consensus 158 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDv 237 (328)
T 3grf_A 158 GFKGIKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDV 237 (328)
T ss_dssp TGGGCCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSE
T ss_pred ccCCcEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCE
Confidence 4789999999986 88888999999999999988775433 21 11 1 3432 2 489999999999
Q ss_pred EEEe----cCCCcc---------cccccCHHHHccCCCCcEEEEcC
Q psy13054 1014 IFVT----CALTKD---------TEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1014 V~l~----lPlt~~---------T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
|..- +...++ ...-++.+.++.+|++++|.-+.
T Consensus 238 vytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 238 VYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp EEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred EEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCC
Confidence 9863 221111 12347999999999999998764
No 369
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.54 E-value=0.074 Score=59.77 Aligned_cols=116 Identities=18% Similarity=0.237 Sum_probs=72.5
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchhh--h---h------cCCcc-cChHhhhccCCEEEEecCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEEG--T---A------LGAQL-VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~~--~---~------~g~~~-~~l~ell~~sDvV~l~lPl 1020 (1128)
...+|+|||.|.+|.+++..+...|. ++++||....+.+. . . ...+. .+..+.++.||+|+++.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 34689999999999999999876664 89999865432221 1 1 01111 1456789999999999974
Q ss_pred Ccccccc-----c--CH-------HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEEE--Ee
Q psy13054 1021 TKDTEQL-----I--GR-------KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGAG--LD 1071 (1128)
Q Consensus 1021 t~~T~~l-----i--~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~gaa--LD 1071 (1128)
.. ..+. + |. +.+....|++++||++-.-=+...++.+. +...++.|.+ ||
T Consensus 85 ~~-~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~k~~~~p~~rviG~gt~lD 152 (317)
T 3d0o_A 85 AQ-KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYATWKFSGLPKERVIGSGTILD 152 (317)
T ss_dssp CC-CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHH
T ss_pred CC-CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHHHHHhCCCHHHEEecCcccc
Confidence 32 2221 0 11 23344479999999874443444444444 3444676763 46
No 370
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=93.50 E-value=0.11 Score=58.40 Aligned_cols=65 Identities=11% Similarity=0.142 Sum_probs=47.8
Q ss_pred CeEEEEEcChhhH-HHHHHHhhCCCEEE-EEeCCCCchh--hhhc-CCc-ccChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGL-ETAKLLKAFKVSKI-LYTSRRVKEE--GTAL-GAQ-LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~-~vA~~l~afG~~Vi-~~d~~~~~~~--~~~~-g~~-~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.+|||||+|.+|. .+++.++.-|++++ ++|+...+.. ++.. +.. +.++++++. +.|+|++++|..
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 77 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPC 77 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGG
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChh
Confidence 4799999999996 67777776788865 5666555543 3344 333 458999997 689999999943
No 371
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.47 E-value=0.14 Score=58.48 Aligned_cols=89 Identities=19% Similarity=0.213 Sum_probs=64.4
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc--------ChHhhhc-----cCCEEEEecC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV--------PLDTLCA-----ESDFIFVTCA 1019 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~--------~l~ell~-----~sDvV~l~lP 1019 (1128)
.|++|.|+|.|.||...++.++.+|+ +|++.+....+.+ +++.|+..+ ++.+.+. ..|+|+.++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 7888876655544 556665321 2333332 4799998876
Q ss_pred CCcccccccCHHHHccCCCC-cEEEEcCCC
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPT-AILVNTSRG 1048 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~g-a~lIN~aRG 1048 (1128)
..+. + ...++.++++ ..+|.++-.
T Consensus 272 ~~~~----~-~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 272 NVGV----M-RNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp CHHH----H-HHHHHTBCTTTCEEEECSCC
T ss_pred CHHH----H-HHHHHHhhcCCcEEEEEcCC
Confidence 4222 1 3567888998 888888743
No 372
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=93.44 E-value=0.079 Score=60.26 Aligned_cols=69 Identities=20% Similarity=0.245 Sum_probs=47.4
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhC--------CCEEEE-EeCCCCchh--hhhcCCc--ccChHhhhcc--CCEEEEe
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAF--------KVSKIL-YTSRRVKEE--GTALGAQ--LVPLDTLCAE--SDFIFVT 1017 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~af--------G~~Vi~-~d~~~~~~~--~~~~g~~--~~~l~ell~~--sDvV~l~ 1017 (1128)
.++--+|||||+|.||+.-++.++++ ++++++ +|++..+.+ ++++++. +.+++++++. -|+|+++
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Ia 101 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVT 101 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEEC
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEEC
Confidence 45556899999999999877766543 567665 455555444 4556764 4589999964 7999999
Q ss_pred cCCC
Q psy13054 1018 CALT 1021 (1128)
Q Consensus 1018 lPlt 1021 (1128)
+|..
T Consensus 102 tP~~ 105 (393)
T 4fb5_A 102 TPNQ 105 (393)
T ss_dssp SCGG
T ss_pred CChH
Confidence 9943
No 373
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.43 E-value=0.097 Score=55.22 Aligned_cols=72 Identities=15% Similarity=0.127 Sum_probs=51.8
Q ss_pred cccccCCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCC-cc------cChHhhhccCCEEEEecCC
Q psy13054 950 NIMGLKGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGA-QL------VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 950 ~~~~L~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~-~~------~~l~ell~~sDvV~l~lPl 1020 (1128)
....+.|++|.|.|. |.||+.+++.|..-|.+|++.+++..+.. ....++ .. .++.+.+...|+|+.+...
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 344799999999998 99999999999999999999987665443 222233 22 3467788899999988775
Q ss_pred C
Q psy13054 1021 T 1021 (1128)
Q Consensus 1021 t 1021 (1128)
.
T Consensus 95 ~ 95 (236)
T 3e8x_A 95 G 95 (236)
T ss_dssp C
T ss_pred C
Confidence 4
No 374
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.41 E-value=0.049 Score=64.65 Aligned_cols=64 Identities=19% Similarity=0.207 Sum_probs=52.6
Q ss_pred cCHHHHhhc---CCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCee
Q psy13054 312 VPLDTLCAE---SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIG 376 (1128)
Q Consensus 312 vsLdeLl~~---SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~Ia 376 (1128)
.+++|+++. +|+|++++|-...+...+ ++....+++|.++|+++.|...+...+.+.+++..+.
T Consensus 57 ~s~~e~v~~l~~aDvVilavp~~~~v~~vl-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~ 123 (474)
T 2iz1_A 57 KTLEEFVGSLEKPRRIMLMVQAGAATDATI-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGIN 123 (474)
T ss_dssp SSHHHHHHTBCSSCEEEECCCTTHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCE
T ss_pred CCHHHHHhhccCCCEEEEEccCchHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCe
Confidence 389999886 999999999887787777 3455678999999999999877888898888764443
No 375
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=93.37 E-value=0.072 Score=60.54 Aligned_cols=105 Identities=12% Similarity=0.178 Sum_probs=65.2
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEE-EEeCCCCchh--hhhcCC----c-ccChHhhhc--cCCEEEEecCCCcccc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKI-LYTSRRVKEE--GTALGA----Q-LVPLDTLCA--ESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi-~~d~~~~~~~--~~~~g~----~-~~~l~ell~--~sDvV~l~lPlt~~T~ 1025 (1128)
.+|||||+|.||+.+++.++.. +++++ ++|+...+.. +...++ . +.++++++. +.|+|++++|.....
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~- 85 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHV- 85 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHH-
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHH-
Confidence 4799999999999999998775 67765 4554433332 334453 2 358999986 599999999933211
Q ss_pred cccCHHHHccCCCCc-EEEEc-CCCcccCHHHHHHHHhcCCce
Q psy13054 1026 QLIGRKQFSLMKPTA-ILVNT-SRGGLLDQEALVEFLKDKKIG 1066 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga-~lIN~-aRG~lVde~aL~~aL~~g~i~ 1066 (1128)
.-..+.++.|. +++.- ---.+-+.++|.++.++..+.
T Consensus 86 ----~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~ 124 (362)
T 1ydw_A 86 ----EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ 124 (362)
T ss_dssp ----HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred ----HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCE
Confidence 12234455665 44432 112233456777777665543
No 376
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.36 E-value=0.056 Score=60.88 Aligned_cols=89 Identities=20% Similarity=0.220 Sum_probs=63.8
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc------ChHhhh----ccCCEEEEecCCCcc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV------PLDTLC----AESDFIFVTCALTKD 1023 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~------~l~ell----~~sDvV~l~lPlt~~ 1023 (1128)
.|++|.|+|.|.||...++.++.+|++|++.+++..+.+ .++.|+..+ ++.+.+ ...|+|+.+....+.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 478999999999999999999999999998886554443 445565321 222222 358999988764222
Q ss_pred cccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1024 TEQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1024 T~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
-...++.|+++..+|.++..
T Consensus 244 -----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 244 -----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp -----HHHHHHHEEEEEEEEECCCC
T ss_pred -----HHHHHHHhhcCCEEEEeccc
Confidence 14567788899999988754
No 377
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=93.33 E-value=0.15 Score=56.04 Aligned_cols=92 Identities=15% Similarity=0.204 Sum_probs=61.0
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh--hhhc-----CCcccChHhhhccCCEEEEecCCCccc-
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE--GTAL-----GAQLVPLDTLCAESDFIFVTCALTKDT- 1024 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~--~~~~-----g~~~~~l~ell~~sDvV~l~lPlt~~T- 1024 (1128)
+.++++.|+|.|-.+++++.-|...|+ ++.++++...+.. ++.. ........+.++++|+|+++.|..-..
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~~ 202 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGTR 202 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCSTT
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccccCCC
Confidence 678999999999999999999999996 7778876655543 1111 111123334567899999999964221
Q ss_pred -ccccCHHHHccCCCCcEEEEc
Q psy13054 1025 -EQLIGRKQFSLMKPTAILVNT 1045 (1128)
Q Consensus 1025 -~~li~~~~l~~mk~ga~lIN~ 1045 (1128)
.--++...++.++++.++.++
T Consensus 203 ~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 203 AELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp CCCSSCHHHHHTCCTTSEEEEC
T ss_pred CCCCCChHHHhccCCCcEEEEE
Confidence 112455566666666555444
No 378
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=93.32 E-value=0.79 Score=51.88 Aligned_cols=93 Identities=9% Similarity=0.158 Sum_probs=64.8
Q ss_pred ccCCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh--h--------hhcCCc--c-cChHhhhccCCEEEEec
Q psy13054 953 GLKGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE--G--------TALGAQ--L-VPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 953 ~L~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~--------~~~g~~--~-~~l~ell~~sDvV~l~l 1018 (1128)
.+.|++|++||= +++.+..+..+..||++|.+..|..-.+. . ...|.. . .+++ .++.+|||..-+
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~ 250 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 250 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecC
Confidence 378999999997 67888888999999999998877543221 1 223533 2 3788 999999999632
Q ss_pred --CCC--c----c----c--ccccCHHHHccCCCCcEEEEcC
Q psy13054 1019 --ALT--K----D----T--EQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1019 --Plt--~----~----T--~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
+.. + + . ..-++.+.++.+|++++|.-+.
T Consensus 251 w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 251 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 292 (339)
T ss_dssp SSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred cccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 111 1 1 1 1346788888888888887664
No 379
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=93.31 E-value=0.16 Score=58.08 Aligned_cols=86 Identities=20% Similarity=0.237 Sum_probs=56.1
Q ss_pred CCCeEEEEE-cChhhHHHHHHHhhCC-CEEEEEeCCCCchh-hh-h----cC-----CcccChHhhhccCCEEEEecCCC
Q psy13054 955 KGATVGIVG-LGNIGLETAKLLKAFK-VSKILYTSRRVKEE-GT-A----LG-----AQLVPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG-~G~IG~~vA~~l~afG-~~Vi~~d~~~~~~~-~~-~----~g-----~~~~~l~ell~~sDvV~l~lPlt 1021 (1128)
...+|||+| +|.||+.+++.|.... ++++...++.+... .. . .+ ....+ ++.+..+|+|+.|+|..
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~ 93 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHG 93 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCch
Confidence 346899999 8999999999997664 57777765543221 11 0 11 11112 55667899999999944
Q ss_pred cccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
.. .+.....+.|+.+|+.+-
T Consensus 94 ~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 94 TT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp TH------HHHHHTSCTTCEEEECSS
T ss_pred hH------HHHHHHHhCCCEEEECCc
Confidence 22 333333367889998865
No 380
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.22 E-value=0.15 Score=58.17 Aligned_cols=88 Identities=24% Similarity=0.290 Sum_probs=62.5
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc--------ChHhhhc-----cCCEEEEecC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV--------PLDTLCA-----ESDFIFVTCA 1019 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~--------~l~ell~-----~sDvV~l~lP 1019 (1128)
.|++|.|+|.|.||...++.++.+|+ +|++.+....+.+ +++.|+..+ ++.+.+. ..|+|+.++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 57899999999999999999999999 7888876665544 555665421 2333222 4789888876
Q ss_pred CCcccccccCHHHHccCCCC-cEEEEcCC
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPT-AILVNTSR 1047 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 1047 (1128)
.. ++ + ...++.++++ ..+|.++-
T Consensus 271 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 271 RL-DT---M-VTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CH-HH---H-HHHHHHBCTTTCEEEECSC
T ss_pred CH-HH---H-HHHHHHhhcCCcEEEEecc
Confidence 32 22 1 3567778888 88888764
No 381
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=93.21 E-value=0.33 Score=54.32 Aligned_cols=94 Identities=14% Similarity=0.185 Sum_probs=67.1
Q ss_pred ccCCCeEEEEEc---ChhhHHHHHHHhhC-CCEEEEEeCCCCchh------hhhcCCcc---cChHhhhccCCEEEEecC
Q psy13054 953 GLKGATVGIVGL---GNIGLETAKLLKAF-KVSKILYTSRRVKEE------GTALGAQL---VPLDTLCAESDFIFVTCA 1019 (1128)
Q Consensus 953 ~L~gktvGIIG~---G~IG~~vA~~l~af-G~~Vi~~d~~~~~~~------~~~~g~~~---~~l~ell~~sDvV~l~lP 1019 (1128)
.+.|++|++||= |++.+..+..+..| |++|.+..|..-.+. +++.|.+. .+++|.++.+|||..-.=
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 378999999998 58999999999999 999998876543221 12235432 489999999999987543
Q ss_pred CCc-----c-c----ccccCHHHHccCCCCcEEEEcC
Q psy13054 1020 LTK-----D-T----EQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1020 lt~-----~-T----~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
-.+ + . ..-++.+.++.+||+++|.-+.
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCS
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 211 1 0 2346888888888888887664
No 382
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.20 E-value=0.16 Score=57.39 Aligned_cols=114 Identities=17% Similarity=0.204 Sum_probs=72.4
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh--h---hh------cCC--cc-cChHhhhccCCEEEEec
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE--G---TA------LGA--QL-VPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~--~---~~------~g~--~~-~~l~ell~~sDvV~l~l 1018 (1128)
+..++|+|||.|.+|..+|..|...|+ +|+.+|....+.+ . .. ... .. .+. +.++.||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 456799999999999999999987777 9999998776542 1 11 112 21 234 7899999999997
Q ss_pred CCCcccccc-----c--CH-------HHHccCCCCcEEEEcCCCcccCHHHHHHHH--hcCCceEEE
Q psy13054 1019 ALTKDTEQL-----I--GR-------KQFSLMKPTAILVNTSRGGLLDQEALVEFL--KDKKIGGAG 1069 (1128)
Q Consensus 1019 Plt~~T~~l-----i--~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~aL--~~g~i~gaa 1069 (1128)
+. |...++ + |. +.+....|++++|+++-.-=+....+.+.- ...++.|.+
T Consensus 84 g~-p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~~~~k~sg~p~~rviG~~ 149 (324)
T 3gvi_A 84 GV-PRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWALQKFSGLPAHKVVGMA 149 (324)
T ss_dssp SC-CCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred Cc-CCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHHHHHHhcCCCHHHEEeec
Confidence 63 222222 1 21 123344689999999865444444444431 224566665
No 383
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.19 E-value=0.073 Score=63.59 Aligned_cols=62 Identities=18% Similarity=0.275 Sum_probs=52.7
Q ss_pred CHHHHhhc---CCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCe
Q psy13054 313 PLDTLCAE---SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKI 375 (1128)
Q Consensus 313 sLdeLl~~---SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~I 375 (1128)
+++|+++. ||+|++++|-...++..+ ++....+++|.++|+++-|.-.+...+.+.|++..+
T Consensus 64 s~~e~v~~l~~aDvVil~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~ 128 (497)
T 2p4q_A 64 SIEDFISKLKRPRKVMLLVKAGAPVDALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGI 128 (497)
T ss_dssp SHHHHHHTSCSSCEEEECCCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHhcCCCCCEEEEEcCChHHHHHHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCC
Confidence 89999887 999999999877888888 455678899999999999887788889888887433
No 384
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.18 E-value=0.074 Score=62.82 Aligned_cols=73 Identities=18% Similarity=0.117 Sum_probs=50.6
Q ss_pred cccccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh--h-hhcCCccc--Ch-HhhhccCCEEEEecCCCcc
Q psy13054 950 NIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE--G-TALGAQLV--PL-DTLCAESDFIFVTCALTKD 1023 (1128)
Q Consensus 950 ~~~~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~-~~~g~~~~--~l-~ell~~sDvV~l~lPlt~~ 1023 (1128)
.+..+.|++|.|||.|.+|.+.++.|...|++|.++++...... . .+.+++.. .+ ++.+..+|+|+. +|..++
T Consensus 6 ~~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~-at~~~~ 84 (457)
T 1pjq_A 6 IFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIA-ATDDDT 84 (457)
T ss_dssp EEECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEE-CCSCHH
T ss_pred eEEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEE-cCCCHH
Confidence 34478999999999999999999999999999999998654332 1 11233321 11 234567777765 454543
No 385
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=93.17 E-value=0.78 Score=51.22 Aligned_cols=102 Identities=18% Similarity=0.152 Sum_probs=72.3
Q ss_pred ccC-CCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCch--hh----h----hcCCcc---cChHhhhccCCEEEEe
Q psy13054 953 GLK-GATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKE--EG----T----ALGAQL---VPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 953 ~L~-gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~--~~----~----~~g~~~---~~l~ell~~sDvV~l~ 1017 (1128)
.+. |++|++||= +++.+..+..+..||++|.+..|..-.+ .. . ..|... .+++|.++.+|||..-
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~ 221 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITD 221 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEec
Confidence 367 999999997 5788888888999999999887754322 11 1 334332 4899999999999875
Q ss_pred c--CCCc--c--------cccccCHHHHccCCCCcEEEEcC---CCcccCHH
Q psy13054 1018 C--ALTK--D--------TEQLIGRKQFSLMKPTAILVNTS---RGGLLDQE 1054 (1128)
Q Consensus 1018 l--Plt~--~--------T~~li~~~~l~~mk~ga~lIN~a---RG~lVde~ 1054 (1128)
. +... + ...-++.+.++.+|++++|.-+. ||.=|+.+
T Consensus 222 ~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~~e 273 (307)
T 3tpf_A 222 TWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVSEE 273 (307)
T ss_dssp CSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBCHH
T ss_pred CcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeCHH
Confidence 4 1111 1 12447999999999999998775 56555543
No 386
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.16 E-value=0.056 Score=60.82 Aligned_cols=114 Identities=15% Similarity=0.167 Sum_probs=70.8
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh--hhh--cC------Ccc-cChHhhhccCCEEEEecCCCcc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE--GTA--LG------AQL-VPLDTLCAESDFIFVTCALTKD 1023 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~--~~~--~g------~~~-~~l~ell~~sDvV~l~lPlt~~ 1023 (1128)
.+|+|||.|.+|..++-.+...+. +++.+|....+.+ +.+ .. .+. .+..+.++.||+|+++.+...
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~- 84 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ- 84 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC-
Confidence 589999999999999999976665 8999987544332 111 11 111 245678999999999987432
Q ss_pred cccc-------cCH-------HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEEE--Ee
Q psy13054 1024 TEQL-------IGR-------KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGAG--LD 1071 (1128)
Q Consensus 1024 T~~l-------i~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~gaa--LD 1071 (1128)
..++ .|. +.+....|++++||++-.-=+....+.+. +...++.|.+ ||
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~gt~LD 150 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGSGTSLD 150 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEeccccch
Confidence 2221 111 23344479999999855444444444444 4444676663 46
No 387
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.13 E-value=0.057 Score=64.21 Aligned_cols=71 Identities=21% Similarity=0.217 Sum_probs=55.4
Q ss_pred cCHHHHhh---cCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecC
Q psy13054 312 VPLDTLCA---ESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVM 383 (1128)
Q Consensus 312 vsLdeLl~---~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVf 383 (1128)
.+++++++ .+|+|++++|-...+..++. +....+++|.++|+++-|...+...+.+.+.+..+...+.-|+
T Consensus 55 ~~~~e~v~~l~~aDvVilaVp~~~~v~~vl~-~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 128 (482)
T 2pgd_A 55 HSLEEMVSKLKKPRRIILLVKAGQAVDNFIE-KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVS 128 (482)
T ss_dssp SSHHHHHHHBCSSCEEEECSCTTHHHHHHHH-HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCHHHHHhhccCCCEEEEeCCChHHHHHHHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCC
Confidence 38999875 89999999998777888773 4556789999999999998878888888888754443333443
No 388
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=93.12 E-value=0.064 Score=60.56 Aligned_cols=112 Identities=11% Similarity=0.050 Sum_probs=69.4
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh--hhh--cC------Ccc-cChHhhhccCCEEEEecCCCc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE--GTA--LG------AQL-VPLDTLCAESDFIFVTCALTK 1022 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~--~~~--~g------~~~-~~l~ell~~sDvV~l~lPlt~ 1022 (1128)
..+|+|||.|.+|..++-.+...+. +++.+|....+.. ..+ .. .+. .+..+.++.||+|+++.+..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~- 87 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP- 87 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC-
Confidence 4689999999999999999976665 8999987554332 111 11 111 24567899999999998743
Q ss_pred ccccc-------cCH-------HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEE
Q psy13054 1023 DTEQL-------IGR-------KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGA 1068 (1128)
Q Consensus 1023 ~T~~l-------i~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~ga 1068 (1128)
...++ .|. +.+....|++++||++-.-=+....+.+. +...++.|.
T Consensus 88 ~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHHcCCCHHHEEEc
Confidence 22222 111 12333468999999855444444444444 344467666
No 389
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.12 E-value=0.036 Score=54.45 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=31.1
Q ss_pred CCEEEEEecChhhHHHHHHHhhCCCeEEEEcCCC
Q psy13054 701 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRR 734 (1128)
Q Consensus 701 gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~~ 734 (1128)
|++++|||.|.+|+.+++.+..+|.++.+|++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 7999999999999999999999999988888643
No 390
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.09 E-value=0.14 Score=58.28 Aligned_cols=88 Identities=19% Similarity=0.211 Sum_probs=63.8
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc--------ChHhhhc-----cCCEEEEecC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV--------PLDTLCA-----ESDFIFVTCA 1019 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~--------~l~ell~-----~sDvV~l~lP 1019 (1128)
.|++|.|+|.|.||...++.++.+|+ +|++.+....+.+ +++.|+..+ ++.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 7888876665554 556665421 2333222 4799998876
Q ss_pred CCcccccccCHHHHccCCCC-cEEEEcCC
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPT-AILVNTSR 1047 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 1047 (1128)
.. ++ + ...++.++++ ..+|.++-
T Consensus 271 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 271 RI-ET---M-MNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECCC
T ss_pred CH-HH---H-HHHHHHHhcCCCEEEEEcc
Confidence 32 22 1 3567888998 88888864
No 391
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=93.09 E-value=0.89 Score=51.70 Aligned_cols=99 Identities=9% Similarity=0.157 Sum_probs=68.2
Q ss_pred ccCCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh--h--------hhcCCc--c-cChHhhhccCCEEEEec
Q psy13054 953 GLKGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE--G--------TALGAQ--L-VPLDTLCAESDFIFVTC 1018 (1128)
Q Consensus 953 ~L~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~--~--------~~~g~~--~-~~l~ell~~sDvV~l~l 1018 (1128)
.+.|++|++||= +++.+..+..+..||++|.+..|..-.+. . ...|.. . .+++ .++.+|||..-+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 378999999997 67888889999999999998877543221 1 223433 2 3788 999999999632
Q ss_pred ----CCCc----c----c--ccccCHHHHccCCCCcEEEEcC---CCcccC
Q psy13054 1019 ----ALTK----D----T--EQLIGRKQFSLMKPTAILVNTS---RGGLLD 1052 (1128)
Q Consensus 1019 ----Plt~----~----T--~~li~~~~l~~mk~ga~lIN~a---RG~lVd 1052 (1128)
...+ + . ..-++.+.++.+|++++|.-+. ||.=|+
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa~Rg~EIt 279 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVT 279 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCCCBTTTBC
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCCCCCCeeC
Confidence 1111 1 1 1446888888888888888765 454443
No 392
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=93.08 E-value=0.076 Score=60.01 Aligned_cols=65 Identities=12% Similarity=0.173 Sum_probs=44.9
Q ss_pred CeEEEEEcChhhHH-HHH-HHh-hCCCEEE-EEeCCCCchh-hhh-cCCc-ccChHhhhcc--CCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLE-TAK-LLK-AFKVSKI-LYTSRRVKEE-GTA-LGAQ-LVPLDTLCAE--SDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~-vA~-~l~-afG~~Vi-~~d~~~~~~~-~~~-~g~~-~~~l~ell~~--sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+. .+. .++ .-+++++ ++|+...+.. ... .++. +.++++++.. .|+|++++|..
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 76 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHAD 76 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGG
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChH
Confidence 37999999999996 455 434 3478887 5565544433 222 2444 3589999986 89999999954
No 393
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=93.02 E-value=0.099 Score=59.33 Aligned_cols=88 Identities=26% Similarity=0.331 Sum_probs=65.3
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hh-hcCCccc----C---hHhhhccCCEEEEecCCCcccc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GT-ALGAQLV----P---LDTLCAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~-~~g~~~~----~---l~ell~~sDvV~l~lPlt~~T~ 1025 (1128)
.|++|.|+|.|.||...++.++.+|++|++.+....+.+ +. +.|+..+ + +.++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 578999999999999999999999999999987766544 34 6665432 2 22333457999988874322
Q ss_pred cccCHHHHccCCCCcEEEEcCC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
-...++.++++..+|.++-
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 2356778899999998874
No 394
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=93.01 E-value=0.052 Score=62.45 Aligned_cols=65 Identities=17% Similarity=0.299 Sum_probs=48.4
Q ss_pred CeEEEEEcC-hhhHHHHHHHhhC-CCEEEE-EeCCCCchh--hhhcCCcc-cChHhhhcc--CCEEEEecCCC
Q psy13054 957 ATVGIVGLG-NIGLETAKLLKAF-KVSKIL-YTSRRVKEE--GTALGAQL-VPLDTLCAE--SDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G-~IG~~vA~~l~af-G~~Vi~-~d~~~~~~~--~~~~g~~~-~~l~ell~~--sDvV~l~lPlt 1021 (1128)
.+|||||+| .+|+..++.++.. ++++++ +|+...+.. +...++.. .+++++++. .|+|++++|..
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~ 75 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQ 75 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcH
Confidence 479999999 9999999998776 677764 454433332 34556653 489999975 99999999943
No 395
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.01 E-value=0.19 Score=51.86 Aligned_cols=93 Identities=12% Similarity=0.117 Sum_probs=61.4
Q ss_pred CeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCccc--ChH----hhhccCCEEEEecCCCcccccc--
Q psy13054 957 ATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLV--PLD----TLCAESDFIFVTCALTKDTEQL-- 1027 (1128)
Q Consensus 957 ktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~--~l~----ell~~sDvV~l~lPlt~~T~~l-- 1027 (1128)
++|.|.|. |.||+.+++.|..-|.+|++.+++..+......++..+ ++. +.+...|+|+.+..........
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 80 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHV 80 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTTSHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCccccchHH
Confidence 36899995 99999999999999999999987654433111233321 222 6788999999888765432211
Q ss_pred -cCHHHHccCCC--CcEEEEcCCCc
Q psy13054 1028 -IGRKQFSLMKP--TAILVNTSRGG 1049 (1128)
Q Consensus 1028 -i~~~~l~~mk~--ga~lIN~aRG~ 1049 (1128)
.....++.|+. ...+|++|...
T Consensus 81 ~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 81 TSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp HHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCceEEEEecce
Confidence 12345566654 36788877654
No 396
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.01 E-value=0.16 Score=51.66 Aligned_cols=96 Identities=20% Similarity=0.173 Sum_probs=60.4
Q ss_pred CCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchhhh-hcCCcc--------cChHhhhccCCEEEEecCCCcc--
Q psy13054 956 GATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEEGT-ALGAQL--------VPLDTLCAESDFIFVTCALTKD-- 1023 (1128)
Q Consensus 956 gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~-~~g~~~--------~~l~ell~~sDvV~l~lPlt~~-- 1023 (1128)
+++|.|.|. |.||+.+++.|..-|.+|++.+++..+.... ..++.. .++.++++.+|+|+.+......
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS 82 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence 478999998 9999999999999999999998665432210 112221 2456788899999988775432
Q ss_pred --ccccc-CHHHHccCCC--CcEEEEcCCCccc
Q psy13054 1024 --TEQLI-GRKQFSLMKP--TAILVNTSRGGLL 1051 (1128)
Q Consensus 1024 --T~~li-~~~~l~~mk~--ga~lIN~aRG~lV 1051 (1128)
..++. ....++.+++ -..+|++|.....
T Consensus 83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~ 115 (206)
T 1hdo_A 83 PTTVMSEGARNIVAAMKAHGVDKVVACTSAFLL 115 (206)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred ccchHHHHHHHHHHHHHHhCCCeEEEEeeeeec
Confidence 00000 1122333321 2378888776543
No 397
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.00 E-value=0.15 Score=57.89 Aligned_cols=89 Identities=19% Similarity=0.249 Sum_probs=64.5
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc---C---hH----hhh----ccCCEEEEec
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV---P---LD----TLC----AESDFIFVTC 1018 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~---~---l~----ell----~~sDvV~l~l 1018 (1128)
.|++|.|+|.|.||...++.++.+|+ +|++.+....+.+ +++.|+..+ + -+ ++. ...|+|+.++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 47899999999999999999999999 8988886655444 556665421 1 11 222 2489999888
Q ss_pred CCCcccccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1019 ALTKDTEQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1019 Plt~~T~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
...+. + ...++.++++..+|.++-+
T Consensus 251 g~~~~----~-~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 251 GAEAS----I-QAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp CCHHH----H-HHHHHHSCTTCEEEECSCC
T ss_pred CChHH----H-HHHHHHhcCCCEEEEEecC
Confidence 74321 1 3567889999999998753
No 398
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=92.94 E-value=0.035 Score=60.08 Aligned_cols=60 Identities=5% Similarity=0.004 Sum_probs=47.2
Q ss_pred CCcccCHHHHhhcCCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHc
Q psy13054 308 GAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKD 372 (1128)
Q Consensus 308 g~~~vsLdeLl~~SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~s 372 (1128)
|++ .++++++++||+|++++|-......+ .+.+..+++ ++|+++.+...+.+.|.+.+..
T Consensus 45 g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 45 GVT-ETSEEDVYSCPVVISAVTPGVALGAA--RRAGRHVRG--IYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp TCE-ECCHHHHHTSSEEEECSCGGGHHHHH--HHHHTTCCS--EEEECSCCCHHHHHHHHHHCSS
T ss_pred CCc-CCHHHHHhcCCEEEEECCCHHHHHHH--HHHHHhcCc--EEEEccCCCHHHHHHHHHHHhh
Confidence 444 68889999999999999976655554 455667887 9999998877677788888866
No 399
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.93 E-value=0.055 Score=61.13 Aligned_cols=88 Identities=19% Similarity=0.243 Sum_probs=60.2
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc------ChHhhhc------cCCEEEEecCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV------PLDTLCA------ESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~------~l~ell~------~sDvV~l~lPl 1020 (1128)
.|++|.|+|.|.||...++.++.+|+ +|++.++...+.+ .++.|+..+ ++.+.+. ..|+|+.+++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68899999999999999999999999 8998876644433 445554321 2222221 46888877763
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
.+. + ...++.|+++..+|.++.
T Consensus 247 ~~~----~-~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 247 PKA----L-EQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHH----H-HHHHHHEEEEEEEEECCC
T ss_pred HHH----H-HHHHHHHhcCCEEEEEcc
Confidence 221 1 345667777778877764
No 400
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.93 E-value=0.15 Score=58.01 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=63.3
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc--------ChHhhhc-----cCCEEEEecC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV--------PLDTLCA-----ESDFIFVTCA 1019 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~--------~l~ell~-----~sDvV~l~lP 1019 (1128)
.|++|.|+|.|.||...++.++.+|+ +|++.+....+.+ +++.|+..+ ++.+.+. ..|+|+.+..
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 57899999999999999999999999 7888876655544 555665321 2333232 4799998876
Q ss_pred CCcccccccCHHHHccCCCC-cEEEEcCC
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPT-AILVNTSR 1047 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 1047 (1128)
..+ + + ...++.++++ ..+|.++-
T Consensus 270 ~~~-~---~-~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVK-V---M-RAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CHH-H---H-HHHHHTBCTTTCEEEECSC
T ss_pred cHH-H---H-HHHHHhhccCCcEEEEEec
Confidence 422 1 1 4567888998 88888864
No 401
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.89 E-value=0.1 Score=51.75 Aligned_cols=36 Identities=22% Similarity=0.228 Sum_probs=32.7
Q ss_pred CCCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 698 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 698 ~l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
...++++.|+|+|.+|+.+|+.|+..|.+|+++++.
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 467899999999999999999999999999999874
No 402
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=92.82 E-value=0.076 Score=61.33 Aligned_cols=67 Identities=12% Similarity=0.146 Sum_probs=50.0
Q ss_pred CCCeEEEEEcCh---hhHHHHHHHhhCC-CEEEE--EeCCCCchh--hhhcCCc----ccChHhhhcc-------CCEEE
Q psy13054 955 KGATVGIVGLGN---IGLETAKLLKAFK-VSKIL--YTSRRVKEE--GTALGAQ----LVPLDTLCAE-------SDFIF 1015 (1128)
Q Consensus 955 ~gktvGIIG~G~---IG~~vA~~l~afG-~~Vi~--~d~~~~~~~--~~~~g~~----~~~l~ell~~-------sDvV~ 1015 (1128)
.-.+|||||+|. ||+..+..++..+ +++++ +|+...+.. ++..|+. +.++++++.. .|+|+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~ 90 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVS 90 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEE
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEE
Confidence 345899999999 9999988887665 67764 565554443 4456763 3589999975 89999
Q ss_pred EecCCC
Q psy13054 1016 VTCALT 1021 (1128)
Q Consensus 1016 l~lPlt 1021 (1128)
+++|..
T Consensus 91 i~tp~~ 96 (398)
T 3dty_A 91 IATPNG 96 (398)
T ss_dssp EESCGG
T ss_pred ECCCcH
Confidence 999954
No 403
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=92.79 E-value=0.17 Score=57.85 Aligned_cols=134 Identities=13% Similarity=0.128 Sum_probs=87.4
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCCcccccccCHHHHcc
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSL 1035 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~ 1035 (1128)
-.++-|+|.|.+|+++++.++.+|++|.++|++...... +-+..+|-++...| .+.++.
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~~-----------~~fp~a~~v~~~~p----------~~~~~~ 257 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEK-----------HFFPDADEIIVDFP----------ADFLRK 257 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGCG-----------GGCTTCSEEEESCH----------HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcccccc-----------ccCCCceEEecCCH----------HHHHhh
Confidence 346999999999999999999999999999988653321 11234554443333 122333
Q ss_pred --CCCCcEEEEcCCCcccCHHHHHHHHhcCCceEEEEe--------ccCCCCCCCCCccccCCCeEECC---CCCCCcHH
Q psy13054 1036 --MKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLD--------VMIPEPLPADHPLVQLDNCVLTP---HTSSATKA 1102 (1128)
Q Consensus 1036 --mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~gaaLD--------V~e~EPl~~~~pL~~~pNvilTP---Hiag~t~e 1102 (1128)
+.+++++|=+.++.-.|...|..+|++ ..++.|+= ..+.+-. ..+ +-+| -+++-|.+
T Consensus 258 ~~~~~~t~vvv~TH~h~~D~~~L~~aL~~-~~~YiG~iGSr~R~~rl~~~g~~--------~~r-i~~PIGL~Iga~tP~ 327 (362)
T 3on5_A 258 FLIRPDDFVLIMTHHFQKDQEILHFLLEK-ELRYIGILGSKERTRRLLQNRKP--------PDH-LYSPVGLSIDAQGPE 327 (362)
T ss_dssp SCCCTTCEEEECCSCHHHHHHHHHHHSSS-CCSEEEESSCHHHHHHHHTSCCC--------CTT-EESSCSCCSCCCSHH
T ss_pred cCCCCCeEEEEEeCCchhhHHHHHHHhcC-CCCEEEEeCCHHHHHHHHhcCCc--------Hhh-eECCCCCCCCCCCHH
Confidence 567888888889988999999888877 44454431 1111110 112 4555 58888876
Q ss_pred HHHHHHHHHHHHHHHHHcCCC
Q psy13054 1103 VRDEKSSTSAENIIRGYKGEP 1123 (1128)
Q Consensus 1103 ~~~~~~~~~~~nl~~~l~G~~ 1123 (1128)
. ++-.++.+|.+..+|++
T Consensus 328 E---IAvSI~AEiia~~~~~~ 345 (362)
T 3on5_A 328 E---IAISIVAQLIQLIRSRK 345 (362)
T ss_dssp H---HHHHHHHHHHHHHHHSC
T ss_pred H---HHHHHHHHHHHHHhCCC
Confidence 4 45666777777766653
No 404
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=92.74 E-value=0.066 Score=56.77 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=44.0
Q ss_pred CeEEEEEcChhhHHHHHH--HhhCCCEEEEEeC-CCCchhhhhcCCc---ccChHhhhc-cCCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKL--LKAFKVSKILYTS-RRVKEEGTALGAQ---LVPLDTLCA-ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~--l~afG~~Vi~~d~-~~~~~~~~~~g~~---~~~l~ell~-~sDvV~l~lPlt 1021 (1128)
++++|||+|++|+.+++. ... |++++++-+ .+.+......++. ..+++++++ +.|+|++++|..
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~ 151 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPRE 151 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHH
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCch
Confidence 579999999999999995 345 888776543 3333221112322 347888886 589999999943
No 405
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=92.70 E-value=0.44 Score=55.78 Aligned_cols=108 Identities=18% Similarity=0.265 Sum_probs=72.2
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCC---------Cchh----hhhcC-------CcccChHhhhc-cC
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRR---------VKEE----GTALG-------AQLVPLDTLCA-ES 1011 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~---------~~~~----~~~~g-------~~~~~l~ell~-~s 1011 (1128)
++.|++|.|.|+|++|+.+|+.|...|++|+.+.+.. +... ....+ .+..+.++++. .|
T Consensus 232 ~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~~~ 311 (440)
T 3aog_A 232 QVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGLPV 311 (440)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTCCC
T ss_pred CccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcCCC
Confidence 4789999999999999999999999999999443331 1111 11111 23445567654 79
Q ss_pred CEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1012 DFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1012 DvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
||++-|... +.|+.+....++ -.+++--+-+.+- .+| .+.|.+..|..+
T Consensus 312 DIlvPcA~~-----n~i~~~na~~l~-ak~VvEgAN~p~t-~eA-~~iL~~~GI~~~ 360 (440)
T 3aog_A 312 EFLVPAALE-----KQITEQNAWRIR-ARIVAEGANGPTT-PAA-DDILLEKGVLVV 360 (440)
T ss_dssp SEEEECSSS-----SCBCTTTGGGCC-CSEEECCSSSCBC-HHH-HHHHHHHTCEEE
T ss_pred cEEEecCCc-----CccchhhHHHcC-CcEEEecCccccC-HHH-HHHHHHCCCEEE
Confidence 999987663 456666666663 5677788888863 443 456666666443
No 406
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=92.70 E-value=0.083 Score=58.36 Aligned_cols=86 Identities=20% Similarity=0.212 Sum_probs=61.4
Q ss_pred CCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-C------hHhhhccCCEEEEecCCCcccc
Q psy13054 955 KGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-P------LDTLCAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 955 ~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-~------l~ell~~sDvV~l~lPlt~~T~ 1025 (1128)
.|++|.|+|. |.||...++.++.+|++|++.+++..+.+ .++.|...+ + +.+.+...|+|+. +.. + +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~-~- 200 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K-E- 200 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T-T-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H-H-
Confidence 4789999998 99999999999999999999987655544 455565431 2 2222356898888 664 2 1
Q ss_pred cccCHHHHccCCCCcEEEEcCC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
-...++.|+++..+|.++-
T Consensus 201 ---~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 201 ---VEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp ---HHHHHTTEEEEEEEEEC--
T ss_pred ---HHHHHHhhccCCEEEEEeC
Confidence 2466788888888888864
No 407
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=92.67 E-value=0.19 Score=54.29 Aligned_cols=80 Identities=11% Similarity=0.032 Sum_probs=52.6
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCCEEEE-EeCCCCchhhhhcCCcc-cChHhhhccCCEEEEecCCCcccccccCHHHHc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKVSKIL-YTSRRVKEEGTALGAQL-VPLDTLCAESDFIFVTCALTKDTEQLIGRKQFS 1034 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~~Vi~-~d~~~~~~~~~~~g~~~-~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~ 1034 (1128)
.+|+|+|+|+||+.+++.+...+-++++ +|+.... ..++.. .++++++ ++|+|+-..+ .+.+.. .+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----~~gv~v~~dl~~l~-~~DVvIDft~-p~a~~~-----~~~ 72 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----TTPYQQYQHIADVK-GADVAIDFSN-PNLLFP-----LLD 72 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------CCSCBCSCTTTCT-TCSEEEECSC-HHHHHH-----HHT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----cCCCceeCCHHHHh-CCCEEEEeCC-hHHHHH-----HHH
Confidence 4799999999999999999877556665 4543331 245544 4788988 9999884443 222322 233
Q ss_pred cCCCCcEEEEcCCC
Q psy13054 1035 LMKPTAILVNTSRG 1048 (1128)
Q Consensus 1035 ~mk~ga~lIN~aRG 1048 (1128)
++.|.-+|....|
T Consensus 73 -l~~g~~vVigTTG 85 (243)
T 3qy9_A 73 -EDFHLPLVVATTG 85 (243)
T ss_dssp -SCCCCCEEECCCS
T ss_pred -HhcCCceEeCCCC
Confidence 6677666655555
No 408
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=92.63 E-value=0.08 Score=59.92 Aligned_cols=32 Identities=28% Similarity=0.280 Sum_probs=29.0
Q ss_pred CEEEEEecChhhHHHHHHHhhCCCeEEE-EcCC
Q psy13054 702 ATVGIVGLGNIGLETAKLLKAFKVSKIL-YTSR 733 (1128)
Q Consensus 702 ktvGIiG~G~IG~~va~r~~afg~~vi~-y~~~ 733 (1128)
-+|||.|+||||+.++|++..+||++++ +||.
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp~ 40 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDPF 40 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCCC
Confidence 4899999999999999999999999988 6663
No 409
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=92.62 E-value=0.23 Score=56.65 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=59.7
Q ss_pred CeEEEEE-cChhhHHHHHHHhhCC------CEEEEEeCCCCchh-hhh--------cCCcccCh-HhhhccCCEEEEecC
Q psy13054 957 ATVGIVG-LGNIGLETAKLLKAFK------VSKILYTSRRVKEE-GTA--------LGAQLVPL-DTLCAESDFIFVTCA 1019 (1128)
Q Consensus 957 ktvGIIG-~G~IG~~vA~~l~afG------~~Vi~~d~~~~~~~-~~~--------~g~~~~~l-~ell~~sDvV~l~lP 1019 (1128)
.+|+|+| .|.+|+.+.++|...+ .+++.+.++..... ..+ ......++ .+.+..+|+|+.|+|
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~alg 89 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLALP 89 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEEEECCT
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEEEECCC
Confidence 6899999 9999999999998765 46666654332111 110 11111122 234568999999999
Q ss_pred CCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHH
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEAL 1056 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL 1056 (1128)
.. ...+....++.|+.+|+.|-..-.+..+.
T Consensus 90 ~~------~s~~~~~~~~~G~~vIDlSa~~R~~~~~~ 120 (352)
T 2nqt_A 90 HG------HSAVLAQQLSPETLIIDCGADFRLTDAAV 120 (352)
T ss_dssp TS------CCHHHHHHSCTTSEEEECSSTTTCSCHHH
T ss_pred Cc------chHHHHHHHhCCCEEEEECCCccCCcchh
Confidence 65 24555555567899999876554444343
No 410
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.59 E-value=0.15 Score=60.01 Aligned_cols=112 Identities=15% Similarity=0.148 Sum_probs=74.3
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCc--h---hhhhcCCccc---ChHhhhcc-CCEEEEecCC---
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVK--E---EGTALGAQLV---PLDTLCAE-SDFIFVTCAL--- 1020 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~--~---~~~~~g~~~~---~l~ell~~-sDvV~l~lPl--- 1020 (1128)
++.||+|.|||+|..|..+|+.|+..|.+|.++|.+... + ..++.|++.. ..++++.. +|+|++.--.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 578999999999999999999999999999999986531 1 1344566543 34456676 8998875322
Q ss_pred Cccc-----c--cccCHH-HHcc-CCCCcEEEEcCCCcccCHHHHHHHHhcCC
Q psy13054 1021 TKDT-----E--QLIGRK-QFSL-MKPTAILVNTSRGGLLDQEALVEFLKDKK 1064 (1128)
Q Consensus 1021 t~~T-----~--~li~~~-~l~~-mk~ga~lIN~aRG~lVde~aL~~aL~~g~ 1064 (1128)
+|+. + .++++- .+.. ++...+-|-=+.|+.-...-+...|+...
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 2221 1 245443 3333 34444555557888777777777777543
No 411
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=92.55 E-value=0.12 Score=58.61 Aligned_cols=65 Identities=14% Similarity=0.207 Sum_probs=45.8
Q ss_pred CeEEEEEcChhhH-HHHHHHhhC-CCEEEEEeCCCCchh-hhh---cCCc-ccChHhhhcc--CCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGL-ETAKLLKAF-KVSKILYTSRRVKEE-GTA---LGAQ-LVPLDTLCAE--SDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~-~vA~~l~af-G~~Vi~~d~~~~~~~-~~~---~g~~-~~~l~ell~~--sDvV~l~lPlt 1021 (1128)
.+|||||+|.||+ ..+..++.. +++++++.++..... +.. .++. +.++++++.. .|+|++++|..
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 76 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAH 76 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGG
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcH
Confidence 3799999999999 577777665 788774443332222 233 3444 3589999986 89999999953
No 412
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.54 E-value=0.19 Score=56.74 Aligned_cols=89 Identities=19% Similarity=0.232 Sum_probs=63.9
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-------C-hHhh---h-----ccCCEEEEe
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-------P-LDTL---C-----AESDFIFVT 1017 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-------~-l~el---l-----~~sDvV~l~ 1017 (1128)
.|++|.|+|.|.||...++.++.+|++|++.+....+.+ .++.|+..+ + .+++ . ...|+|+.+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 578999999999999999999999999888876555443 455565321 1 1222 2 258999988
Q ss_pred cCCCcccccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1018 CALTKDTEQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1018 lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
....+ + + ...++.++++..+|.++-+
T Consensus 248 ~g~~~-~---~-~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNEK-C---I-TIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCHH-H---H-HHHHHHSCTTCEEEECSCC
T ss_pred CCCHH-H---H-HHHHHHHhcCCEEEEEecC
Confidence 87422 1 1 3567888999999998754
No 413
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.53 E-value=0.12 Score=59.59 Aligned_cols=90 Identities=21% Similarity=0.253 Sum_probs=63.1
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc------ChHhhh------ccCCEEEEecCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV------PLDTLC------AESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~------~l~ell------~~sDvV~l~lPl 1020 (1128)
.|.+|.|+|.|.+|...++.++.+|+ +|++.+....+.+ +++.|+..+ ++.+.+ ...|+|+-++..
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 58899999999999999999999999 8888876655544 556665432 232222 148999988875
Q ss_pred CcccccccCHHHHccC----CCCcEEEEcCCC
Q psy13054 1021 TKDTEQLIGRKQFSLM----KPTAILVNTSRG 1048 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~m----k~ga~lIN~aRG 1048 (1128)
...+. ...++.+ +++..+|.++-.
T Consensus 293 ~~~~~----~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 293 PQLVW----PQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp HHHHH----HHHHHHHHHCSCCCCEEEECSCC
T ss_pred cHHHH----HHHHHHHHhccCCCcEEEEeCCC
Confidence 42222 2233444 899999988743
No 414
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.51 E-value=0.22 Score=56.74 Aligned_cols=88 Identities=19% Similarity=0.202 Sum_probs=63.0
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc--------ChHhhhc-----cCCEEEEecC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV--------PLDTLCA-----ESDFIFVTCA 1019 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~--------~l~ell~-----~sDvV~l~lP 1019 (1128)
.|++|.|+|.|.||...++.++.+|+ +|++.+....+.+ +++.|+..+ ++.+.+. ..|+|+-+..
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 57899999999999999999999999 7888876665544 556665421 2323222 4799988776
Q ss_pred CCcccccccCHHHHccCCCC-cEEEEcCC
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPT-AILVNTSR 1047 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 1047 (1128)
.. ++ + ...++.++++ ..+|.++-
T Consensus 275 ~~-~~---~-~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TA-QT---L-KAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECCC
T ss_pred CH-HH---H-HHHHHHhhcCCCEEEEECC
Confidence 32 21 1 3567788888 88888764
No 415
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=92.50 E-value=0.094 Score=60.63 Aligned_cols=92 Identities=15% Similarity=0.096 Sum_probs=63.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhCC--------CEEEEEeCCCCc--h---h-hh--hc------CC------cc-cChHhh
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFK--------VSKILYTSRRVK--E---E-GT--AL------GA------QL-VPLDTL 1007 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG--------~~Vi~~d~~~~~--~---~-~~--~~------g~------~~-~~l~el 1007 (1128)
.+|+|||.|.-|.++|..|..-| .+|..|.++.+. . + .. .. ++ .. .++++.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~a 114 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDS 114 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHH
Confidence 37999999999999999996533 468888654321 0 0 00 00 11 11 278999
Q ss_pred hccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcc
Q psy13054 1008 CAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1008 l~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~l 1050 (1128)
++.||+|++.+| ....+.++. +.-..++++..+|+++-|=-
T Consensus 115 l~~ad~ii~avP-s~~~r~~l~-~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 115 VKDVDIIVFNIP-HQFLPRICS-QLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp HTTCSEEEECSC-GGGHHHHHH-HHTTTSCTTCEEEECCCSCE
T ss_pred HhcCCEEEEECC-hhhhHHHHH-HhccccCCCceeEEeccccc
Confidence 999999999999 445555543 34456788999999998843
No 416
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.49 E-value=0.074 Score=60.47 Aligned_cols=33 Identities=36% Similarity=0.372 Sum_probs=30.7
Q ss_pred CEEEEEecChhhHHHHHHHhhCCCeEEEEcCCC
Q psy13054 702 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRR 734 (1128)
Q Consensus 702 ktvGIiG~G~IG~~va~r~~afg~~vi~y~~~~ 734 (1128)
++|||||+|.||+.+|+.++..|.+|++||+..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999743
No 417
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.45 E-value=0.16 Score=57.02 Aligned_cols=115 Identities=18% Similarity=0.221 Sum_probs=71.2
Q ss_pred cCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCC--Cchhh--hh---------cC--CcccChHhhhccCCEEEEe
Q psy13054 954 LKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRR--VKEEG--TA---------LG--AQLVPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~--~~~~~--~~---------~g--~~~~~l~ell~~sDvV~l~ 1017 (1128)
...++|+|||.|.+|..+|..+...|. +|+.+|... .+... .+ .. +...+-.+.++.||+|+++
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia 85 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT 85 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence 456899999999999999999988888 999998762 22211 10 11 1112235678999999998
Q ss_pred cCCCccccc-----cc--CH-------HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEEE
Q psy13054 1018 CALTKDTEQ-----LI--GR-------KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGAG 1069 (1128)
Q Consensus 1018 lPlt~~T~~-----li--~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~gaa 1069 (1128)
.+. +...+ ++ |. +.+....|++++|+++-.-=+....+.+. +...++.|.+
T Consensus 86 ag~-p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t~~~~k~sg~p~~rviG~g 152 (315)
T 3tl2_A 86 AGI-ARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMTYSVFKEAGFPKERVIGQS 152 (315)
T ss_dssp CSC-CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred CCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChHHHHHHHHHHhcCCChHHEEeec
Confidence 752 22111 12 11 22344468999999985443334444433 2234666663
No 418
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.41 E-value=0.081 Score=59.13 Aligned_cols=116 Identities=13% Similarity=0.174 Sum_probs=68.4
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh-hh---hc---CCcc-cChHhhhccCCEEEEecCCCc---
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE-GT---AL---GAQL-VPLDTLCAESDFIFVTCALTK--- 1022 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~-~~---~~---g~~~-~~l~ell~~sDvV~l~lPlt~--- 1022 (1128)
.++|+|||.|.+|..+|..+..-|. +++.+|....... +. .. .++. .++ +.++.||+|+++.....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 3789999999999999999877677 9999997653111 11 11 1222 366 66899999999874311
Q ss_pred -------ccccccC--HHHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEE--EEec
Q psy13054 1023 -------DTEQLIG--RKQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGA--GLDV 1072 (1128)
Q Consensus 1023 -------~T~~li~--~~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~ga--aLDV 1072 (1128)
++..++. .+.+....|++++||++-..-+-...+.+. +...++.|. -||+
T Consensus 93 tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~gt~Ld~ 155 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYVTWKLSTFPANRVIGIGCNLDS 155 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHHHHHHHHHHCCCGGGEEECTTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCCCCCchH
Confidence 1111110 012333358999999988444334444333 223466665 3464
No 419
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=92.30 E-value=0.17 Score=52.71 Aligned_cols=91 Identities=14% Similarity=0.189 Sum_probs=60.8
Q ss_pred CeEEEEE-cChhhHHHHHHHh-hCCCEEEEEeCCCC-chh-h--hhcCCcc--------cChHhhhccCCEEEEecCCCc
Q psy13054 957 ATVGIVG-LGNIGLETAKLLK-AFKVSKILYTSRRV-KEE-G--TALGAQL--------VPLDTLCAESDFIFVTCALTK 1022 (1128)
Q Consensus 957 ktvGIIG-~G~IG~~vA~~l~-afG~~Vi~~d~~~~-~~~-~--~~~g~~~--------~~l~ell~~sDvV~l~lPlt~ 1022 (1128)
|++.|.| .|.||+++++.|. .-|++|++.+++.. +.. . ...++.. .+++++++..|+|+.++...
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~- 84 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES- 84 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC-
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC-
Confidence 6799999 5999999999999 89999999986644 222 1 1112211 24567889999999888743
Q ss_pred ccccccCHHHHccCCC-C-cEEEEcCCCccc
Q psy13054 1023 DTEQLIGRKQFSLMKP-T-AILVNTSRGGLL 1051 (1128)
Q Consensus 1023 ~T~~li~~~~l~~mk~-g-a~lIN~aRG~lV 1051 (1128)
... ....+..|+. + ..|||+|.....
T Consensus 85 n~~---~~~~~~~~~~~~~~~iv~iSs~~~~ 112 (221)
T 3r6d_A 85 GSD---MASIVKALSRXNIRRVIGVSMAGLS 112 (221)
T ss_dssp HHH---HHHHHHHHHHTTCCEEEEEEETTTT
T ss_pred Chh---HHHHHHHHHhcCCCeEEEEeeceec
Confidence 111 3445555543 2 368888765543
No 420
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=92.30 E-value=0.11 Score=59.77 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=34.1
Q ss_pred CCCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCCC
Q psy13054 698 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRR 734 (1128)
Q Consensus 698 ~l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~~ 734 (1128)
-+.||||||||.|.+|+.+++.++.+|++++++|+..
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 3689999999999999999999999999999998743
No 421
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.22 E-value=0.072 Score=63.28 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=55.6
Q ss_pred cCHHHHhhc---CCEEEEecCCCcccccccCHHHHhcCCCCcEEEEecCCCccCHHHHHHHHHcCCeeEEEEecC
Q psy13054 312 VPLDTLCAE---SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVM 383 (1128)
Q Consensus 312 vsLdeLl~~---SDiVslh~PLT~~T~~lIn~~~l~~MK~gaiLINtaRG~lVDe~AL~~AL~sG~IagAaLDVf 383 (1128)
.+++|+++. +|+|++++|-...++..+ ++....+++|.++|+++.|...+...+.+.+.+..+...+.-|.
T Consensus 57 ~~~~e~v~~l~~aDvVilaVp~~~~v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~ 130 (478)
T 1pgj_A 57 ETMEAFAASLKKPRKALILVQAGAATDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGIS 130 (478)
T ss_dssp SCHHHHHHHBCSSCEEEECCCCSHHHHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred CCHHHHHhcccCCCEEEEecCChHHHHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeecc
Confidence 389999875 999999999877777777 45556789999999999998778888999998754443333443
No 422
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.21 E-value=0.16 Score=56.61 Aligned_cols=111 Identities=18% Similarity=0.150 Sum_probs=71.9
Q ss_pred CeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchh--hh---h----c--C--Cccc-ChHhhhccCCEEEEecCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEE--GT---A----L--G--AQLV-PLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~--~~---~----~--g--~~~~-~l~ell~~sDvV~l~lPl 1020 (1128)
.+|+|||.|.+|..+|..|...|. +|..||....+.+ .. . . . +... + .+.++.||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 379999999999999999987777 8999997665432 10 1 1 1 1112 4 7899999999999763
Q ss_pred Ccccccc-----c--CH-------HHHccCCCCcEEEEcCCCcccCHHHHH--HH--HhcCCceEEE--Ee
Q psy13054 1021 TKDTEQL-----I--GR-------KQFSLMKPTAILVNTSRGGLLDQEALV--EF--LKDKKIGGAG--LD 1071 (1128)
Q Consensus 1021 t~~T~~l-----i--~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~--~a--L~~g~i~gaa--LD 1071 (1128)
. ...++ + |. +.+....|++++|+++- .+|.-..+ +. +...++.|.+ ||
T Consensus 80 ~-~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN--Pvd~~t~~~~k~~g~p~~rviG~gt~LD 147 (294)
T 1oju_A 80 A-RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN--PMDVMTYIMWKESGKPRNEVFGMGNQLD 147 (294)
T ss_dssp C-CCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS--SHHHHHHHHHHHSCCCTTSEEECSHHHH
T ss_pred C-CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC--cchHHHHHHHHhcCCCHHHEeecccccH
Confidence 3 22222 1 11 23556689999999984 45543332 22 1234777774 66
No 423
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=92.12 E-value=0.16 Score=49.22 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=70.2
Q ss_pred CCeEEEEEc----ChhhHHHHHHHhhCCCEEEEEeCCCCchhhhhcCCc-ccChHhhhccCCEEEEecCCCcccccccCH
Q psy13054 956 GATVGIVGL----GNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQ-LVPLDTLCAESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 956 gktvGIIG~----G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g~~-~~~l~ell~~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
-++|.|||. ++.|..+.+.|+..|.+|+-++|....- .|.+ +.++.++-. -|.+++++| .+.+..+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i----~G~~~y~sl~dlp~-vDlavi~~p-~~~v~~~v~- 76 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV----LGKTIINERPVIEG-VDTVTLYIN-PQNQLSEYN- 76 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE----TTEECBCSCCCCTT-CCEEEECSC-HHHHGGGHH-
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC----CCeeccCChHHCCC-CCEEEEEeC-HHHHHHHHH-
Confidence 378999998 5689999999999999999888765432 2433 347778777 999999999 455666664
Q ss_pred HHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1031 KQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1031 ~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
.+..+...+++++.+- .++++.+..++..|.-
T Consensus 77 -e~~~~g~k~v~~~~G~----~~~e~~~~a~~~Girv 108 (122)
T 3ff4_A 77 -YILSLKPKRVIFNPGT----ENEELEEILSENGIEP 108 (122)
T ss_dssp -HHHHHCCSEEEECTTC----CCHHHHHHHHHTTCEE
T ss_pred -HHHhcCCCEEEECCCC----ChHHHHHHHHHcCCeE
Confidence 3334455577765542 3466777777665653
No 424
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=92.12 E-value=0.34 Score=53.71 Aligned_cols=66 Identities=17% Similarity=0.094 Sum_probs=52.7
Q ss_pred cCCCeEEEEEc---ChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc-cChHhhhccCCEEEEecCC
Q psy13054 954 LKGATVGIVGL---GNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL-VPLDTLCAESDFIFVTCAL 1020 (1128)
Q Consensus 954 L~gktvGIIG~---G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~-~~l~ell~~sDvV~l~lPl 1020 (1128)
+.|++|++||= +++.+..+..+..||++|.+..|..-.+. ..+.|++. .+++|.++.+|||.. +-.
T Consensus 144 l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~ 214 (291)
T 3d6n_B 144 VKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRL 214 (291)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCC
T ss_pred cCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCc
Confidence 78999999997 89999999999999999998876543322 23345553 489999999999998 654
No 425
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=92.10 E-value=0.1 Score=60.34 Aligned_cols=69 Identities=17% Similarity=0.278 Sum_probs=47.4
Q ss_pred ccCCC-eEEEEEcChhhHHHHHHHhhC---------CCEEEEE-eCCCCchh--hhhcCCc--ccChHhhhc--cCCEEE
Q psy13054 953 GLKGA-TVGIVGLGNIGLETAKLLKAF---------KVSKILY-TSRRVKEE--GTALGAQ--LVPLDTLCA--ESDFIF 1015 (1128)
Q Consensus 953 ~L~gk-tvGIIG~G~IG~~vA~~l~af---------G~~Vi~~-d~~~~~~~--~~~~g~~--~~~l~ell~--~sDvV~ 1015 (1128)
.+..| +|||||+|.||+.-++.++.. +++++++ |+...+.+ +++.+.. +.+++++++ +-|+|+
T Consensus 22 ~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~ 101 (412)
T 4gqa_A 22 SMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVD 101 (412)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEE
T ss_pred cccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEE
Confidence 34444 799999999999988887654 4566654 54444333 4556663 358999996 579999
Q ss_pred EecCCC
Q psy13054 1016 VTCALT 1021 (1128)
Q Consensus 1016 l~lPlt 1021 (1128)
+++|..
T Consensus 102 I~tp~~ 107 (412)
T 4gqa_A 102 ITSPNH 107 (412)
T ss_dssp ECSCGG
T ss_pred ECCCcH
Confidence 999943
No 426
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.10 E-value=0.15 Score=57.47 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=63.5
Q ss_pred CCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc-------cChHhhhc-----cCCEEEEecCC
Q psy13054 955 KGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL-------VPLDTLCA-----ESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~-------~~l~ell~-----~sDvV~l~lPl 1020 (1128)
.|++|.|+|. |.||+.+++.++..|++|++.++...+.+ ..+.|... .++.+.+. ..|+|+.+...
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 5789999999 89999999999999999999886655443 44445421 13333333 47999887763
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
.+. -...+..|+++..+|+++..
T Consensus 249 ~~~-----~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 249 EAA-----IEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHH-----HHHHTTSEEEEEEEEECCCC
T ss_pred HHH-----HHHHHHHHhcCCEEEEEeCC
Confidence 222 14567788899999998754
No 427
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=92.09 E-value=0.11 Score=61.75 Aligned_cols=66 Identities=18% Similarity=0.297 Sum_probs=49.4
Q ss_pred CCCeEEEEEc----ChhhHHHHHHHhhC--CCEEE-EEeCCCCchh--hhhcCCc----ccChHhhhc--cCCEEEEecC
Q psy13054 955 KGATVGIVGL----GNIGLETAKLLKAF--KVSKI-LYTSRRVKEE--GTALGAQ----LVPLDTLCA--ESDFIFVTCA 1019 (1128)
Q Consensus 955 ~gktvGIIG~----G~IG~~vA~~l~af--G~~Vi-~~d~~~~~~~--~~~~g~~----~~~l~ell~--~sDvV~l~lP 1019 (1128)
.-.+|||||+ |.||+..++.++.. +++++ ++|+...+.. ++..|+. +.+++++++ +.|+|++++|
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 3457999999 99999999999886 77876 4554443333 3445653 458999996 6899999999
Q ss_pred C
Q psy13054 1020 L 1020 (1128)
Q Consensus 1020 l 1020 (1128)
.
T Consensus 118 ~ 118 (479)
T 2nvw_A 118 V 118 (479)
T ss_dssp H
T ss_pred c
Confidence 4
No 428
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.06 E-value=0.094 Score=59.28 Aligned_cols=112 Identities=15% Similarity=0.144 Sum_probs=69.8
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC--EEEEEeCCCCchhh--h--hcC--------Ccc-cChHhhhccCCEEEEecC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV--SKILYTSRRVKEEG--T--ALG--------AQL-VPLDTLCAESDFIFVTCA 1019 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~--~Vi~~d~~~~~~~~--~--~~g--------~~~-~~l~ell~~sDvV~l~lP 1019 (1128)
..++|+|||.|.||..+|..+...|+ +++.+|....+... . ..+ +.. .+.++ ++.||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999987777 89999975543321 1 011 111 25655 899999999865
Q ss_pred CCccccc-----cc--CH-------HHHccCCCCcEEEEcCCCcccCHHHHHHHH--hcCCceEE
Q psy13054 1020 LTKDTEQ-----LI--GR-------KQFSLMKPTAILVNTSRGGLLDQEALVEFL--KDKKIGGA 1068 (1128)
Q Consensus 1020 lt~~T~~-----li--~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~aL--~~g~i~ga 1068 (1128)
. +...+ ++ |. +.+....|++++++++-.-=+....+.+.. ...++.|.
T Consensus 99 ~-p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvdi~t~~~~k~sg~p~~rViG~ 162 (330)
T 3ldh_A 99 A-RQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGTDKNKQDWKLSGLPMHRIIGS 162 (330)
T ss_dssp C-CCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHCCCGGGEECC
T ss_pred C-CCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccHHHHHHHHHHhCCCHHHeecc
Confidence 3 22212 12 11 234555899999999864433333333331 22355554
No 429
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=92.06 E-value=0.13 Score=54.35 Aligned_cols=96 Identities=16% Similarity=0.149 Sum_probs=63.0
Q ss_pred ccCCCeEEEEE-cChhhHHHHHHHhhCC-CEEEEEeCCCCchh-hhhcCCc--------ccChHhhhccCCEEEEecCCC
Q psy13054 953 GLKGATVGIVG-LGNIGLETAKLLKAFK-VSKILYTSRRVKEE-GTALGAQ--------LVPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 953 ~L~gktvGIIG-~G~IG~~vA~~l~afG-~~Vi~~d~~~~~~~-~~~~g~~--------~~~l~ell~~sDvV~l~lPlt 1021 (1128)
.+..|+|.|.| .|.||+++++.|..-| .+|++++++..+.. ....++. ..+++++++..|+|+.+++..
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~ 99 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE 99 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence 45568999999 5999999999999999 89999886654332 1111221 124667889999999887643
Q ss_pred cccccccCHHHHccCCC--CcEEEEcCCCcc
Q psy13054 1022 KDTEQLIGRKQFSLMKP--TAILVNTSRGGL 1050 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~--ga~lIN~aRG~l 1050 (1128)
... ......+..|+. ...|||+|....
T Consensus 100 ~~~--~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 100 DLD--IQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp THH--HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred chh--HHHHHHHHHHHHcCCCEEEEEeccee
Confidence 321 112345555533 247999987554
No 430
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=92.00 E-value=0.24 Score=55.24 Aligned_cols=65 Identities=12% Similarity=0.130 Sum_probs=47.2
Q ss_pred CeEEEEEc-ChhhHHHHHHHhhCCCEEEEE-eCCCCchhh-hhc-CCc-ccChHhhh----------ccCCEEEEecCCC
Q psy13054 957 ATVGIVGL-GNIGLETAKLLKAFKVSKILY-TSRRVKEEG-TAL-GAQ-LVPLDTLC----------AESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~-G~IG~~vA~~l~afG~~Vi~~-d~~~~~~~~-~~~-g~~-~~~l~ell----------~~sDvV~l~lPlt 1021 (1128)
.++||||+ |.||+..++.++..+.+++++ |++..+... ... +.. +.++++++ .+.|+|++++|..
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~ 83 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNH 83 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGG
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCch
Confidence 57999999 789999999999889887755 444433222 222 233 34788887 6799999999943
No 431
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=91.99 E-value=0.099 Score=62.03 Aligned_cols=113 Identities=16% Similarity=0.227 Sum_probs=73.5
Q ss_pred CCeEEEEEcChh--hHHHHHHHh---hC-CCEEEEEeCCCCchhh-----h----hcC----Ccc-cChHhhhccCCEEE
Q psy13054 956 GATVGIVGLGNI--GLETAKLLK---AF-KVSKILYTSRRVKEEG-----T----ALG----AQL-VPLDTLCAESDFIF 1015 (1128)
Q Consensus 956 gktvGIIG~G~I--G~~vA~~l~---af-G~~Vi~~d~~~~~~~~-----~----~~g----~~~-~~l~ell~~sDvV~ 1015 (1128)
..+|+|||.|.+ |.++|..+. ++ |.+|+.||....+.+. . ..+ ++. .++++.++.||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 468999999997 566666553 44 8899999976643220 0 111 122 26778899999999
Q ss_pred EecCCC---------------------cccc-------ccc----C----H---HHHccCCCCcEEEEcCCCcccCHHHH
Q psy13054 1016 VTCALT---------------------KDTE-------QLI----G----R---KQFSLMKPTAILVNTSRGGLLDQEAL 1056 (1128)
Q Consensus 1016 l~lPlt---------------------~~T~-------~li----~----~---~~l~~mk~ga~lIN~aRG~lVde~aL 1056 (1128)
+++|.. .+|. |++ + . +.+....|+|++||.+-.-=+-+.++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 999741 1110 111 0 0 33555679999999998877767777
Q ss_pred HHHHhcCCceEEE
Q psy13054 1057 VEFLKDKKIGGAG 1069 (1128)
Q Consensus 1057 ~~aL~~g~i~gaa 1069 (1128)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 66 5566666663
No 432
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.97 E-value=0.069 Score=55.00 Aligned_cols=88 Identities=17% Similarity=0.286 Sum_probs=55.1
Q ss_pred CCCeEEEEE-cChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc------Ch-Hhhh-----ccCCEEEEecCC
Q psy13054 955 KGATVGIVG-LGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV------PL-DTLC-----AESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG-~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~------~l-~ell-----~~sDvV~l~lPl 1020 (1128)
.|++|.|+| .|.||+.+++.++..|++|++.++...+.+ ..+.|...+ +. +++. ...|+|+.+..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g- 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA- 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC-
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-
Confidence 578999999 699999999999999999998886544332 333343211 11 1111 13567666553
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
. ++ -...+..|+++..+|+++..
T Consensus 117 ~-~~----~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 117 G-EA----IQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp T-HH----HHHHHHTEEEEEEEEECSCG
T ss_pred h-HH----HHHHHHHhccCCEEEEEcCC
Confidence 1 11 13456666777777776543
No 433
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=91.95 E-value=0.25 Score=56.18 Aligned_cols=85 Identities=22% Similarity=0.217 Sum_probs=53.9
Q ss_pred CeEEEEE-cChhhHHHHHHHhhCC-CEEEEEeCCCCchh-hhh--------cCCcccChHhhhccCCEEEEecCCCcccc
Q psy13054 957 ATVGIVG-LGNIGLETAKLLKAFK-VSKILYTSRRVKEE-GTA--------LGAQLVPLDTLCAESDFIFVTCALTKDTE 1025 (1128)
Q Consensus 957 ktvGIIG-~G~IG~~vA~~l~afG-~~Vi~~d~~~~~~~-~~~--------~g~~~~~l~ell~~sDvV~l~lPlt~~T~ 1025 (1128)
.+|||+| +|.||+.+.+.|.... ++++...++..... ..+ ......++++ +..+|+|+.|+|.... +
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s-~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVF-A 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHH-H
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHH-H
Confidence 5799999 7999999999997654 57776665433211 110 1122234555 5789999999995532 2
Q ss_pred cccCHHHHccCCCCcEEEEcCC
Q psy13054 1026 QLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1026 ~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
.+.. +.++.|+.+|..|-
T Consensus 83 ~~a~----~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 83 REFD----RYSALAPVLVDLSA 100 (345)
T ss_dssp HTHH----HHHTTCSEEEECSS
T ss_pred HHHH----HHHHCCCEEEEcCc
Confidence 2221 22366888888865
No 434
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=91.89 E-value=0.12 Score=58.08 Aligned_cols=88 Identities=16% Similarity=0.214 Sum_probs=62.5
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc------ChHhhhc----cCCEEEEecCCCcc
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV------PLDTLCA----ESDFIFVTCALTKD 1023 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~------~l~ell~----~sDvV~l~lPlt~~ 1023 (1128)
.|++|.|+|.|.||...++.++.+|++|++.+....+.+ .++.|+..+ ++.+.+. ..|+|+.+....+.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~ 245 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKA 245 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHH
Confidence 578999999999999999999999999999987665554 556665421 2333222 57888877653221
Q ss_pred cccccCHHHHccCCCCcEEEEcCC
Q psy13054 1024 TEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1024 T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
+ ...+..++++..++.++-
T Consensus 246 ----~-~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 246 ----F-SQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp ----H-HHHHHHEEEEEEEEECSC
T ss_pred ----H-HHHHHHhccCCEEEEeCC
Confidence 1 345677888888888763
No 435
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=91.87 E-value=0.12 Score=57.12 Aligned_cols=101 Identities=20% Similarity=0.229 Sum_probs=61.1
Q ss_pred CeEEEEEcChhhHHHHHHHhh----CCCEEEEEeCCCCchhhhhcCCcccChHhhhc--cCCEEEEecCCCcccccccCH
Q psy13054 957 ATVGIVGLGNIGLETAKLLKA----FKVSKILYTSRRVKEEGTALGAQLVPLDTLCA--ESDFIFVTCALTKDTEQLIGR 1030 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~a----fG~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~--~sDvV~l~lPlt~~T~~li~~ 1030 (1128)
.+|||||+|.||+..++.+.. -++++++..++.. .....++.+.+++++++ +.|+|++++|.. ++. +
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~--~a~~~g~~~~~~~ell~~~~vD~V~i~tp~~--~H~---~ 80 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE--LGSLDEVRQISLEDALRSQEIDVAYICSESS--SHE---D 80 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC--CCEETTEEBCCHHHHHHCSSEEEEEECSCGG--GHH---H
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH--HHHHcCCCCCCHHHHhcCCCCCEEEEeCCcH--hHH---H
Confidence 479999999999999988865 3677765444322 12234555678999997 689999999943 221 1
Q ss_pred HHHccCCCCc-EEEEc-CCCcccCHHHHHHHHhcCC
Q psy13054 1031 KQFSLMKPTA-ILVNT-SRGGLLDQEALVEFLKDKK 1064 (1128)
Q Consensus 1031 ~~l~~mk~ga-~lIN~-aRG~lVde~aL~~aL~~g~ 1064 (1128)
-..+.++.|. +++.- ---.+-+-++|.++.++..
T Consensus 81 ~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g 116 (294)
T 1lc0_A 81 YIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKG 116 (294)
T ss_dssp HHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 2223344444 55552 1112233456666654433
No 436
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.85 E-value=0.11 Score=53.01 Aligned_cols=37 Identities=27% Similarity=0.255 Sum_probs=33.5
Q ss_pred CCCCCCEEEEEecChhhHHHHHHHhhC-CCeEEEEcCC
Q psy13054 697 MGLKGATVGIVGLGNIGLETAKLLKAF-KVSKILYTSR 733 (1128)
Q Consensus 697 ~~l~gktvGIiG~G~IG~~va~r~~af-g~~vi~y~~~ 733 (1128)
.++.+++++|+|+|++|+.+|+.|+.. |.+|+++|+.
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 357788999999999999999999998 9999999874
No 437
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=91.85 E-value=0.16 Score=59.30 Aligned_cols=64 Identities=19% Similarity=0.189 Sum_probs=47.7
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhh--hhc--CCccc---ChHhhhccCCEEEE
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEG--TAL--GAQLV---PLDTLCAESDFIFV 1016 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~--~~~--g~~~~---~l~ell~~sDvV~l 1016 (1128)
-+.|++|+|+|-|.+|+.+++.++.+|.+|+++|+....+.. .+. -..+. .+.++++++|+|+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 468999999999999999999999999999999876654431 111 11112 35566778999884
No 438
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=91.83 E-value=0.46 Score=55.62 Aligned_cols=88 Identities=14% Similarity=0.272 Sum_probs=66.9
Q ss_pred ccCCCeEEEEEcCh----------hhHHHHHHHhhC-CCEEEEEeCCCCchhhhhcCCcccChHhhhccCCEEEEecCCC
Q psy13054 953 GLKGATVGIVGLGN----------IGLETAKLLKAF-KVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 953 ~L~gktvGIIG~G~----------IG~~vA~~l~af-G~~Vi~~d~~~~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt 1021 (1128)
.+.|++|+|+|+.- -...+++.|... |++|.+|||..... ....++++.++.+|+|+++.+-.
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~------~~~~~~~~~~~~ad~vvi~t~~~ 385 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD------FVEHDMSHAVKDASLVLILSDHS 385 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT------TBCSTTHHHHTTCSEEEECSCCG
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc------cccCCHHHHHhCCCEEEEecCCH
Confidence 47899999999852 368999999999 99999999987642 22357899999999999988844
Q ss_pred cccccccCHHHHccCCCCcEEEEcCCCcc
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aRG~l 1050 (1128)
+-+. ++.+.++.|+ +.+++++ |+-+
T Consensus 386 -~f~~-~d~~~~~~~~-~~~i~D~-r~~~ 410 (431)
T 3ojo_A 386 -EFKN-LSDSHFDKMK-HKVIFDT-KNVV 410 (431)
T ss_dssp -GGTS-CCGGGGTTCS-SCEEEES-SCCC
T ss_pred -HHhc-cCHHHHHhCC-CCEEEEC-CCCC
Confidence 3333 3555667787 6788885 5544
No 439
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=91.81 E-value=0.11 Score=60.53 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=48.2
Q ss_pred CCeEEEEEcCh---hhHHHHHHHhhCC-CEEE--EEeCCCCchh--hhhcCCc----ccChHhhhcc-------CCEEEE
Q psy13054 956 GATVGIVGLGN---IGLETAKLLKAFK-VSKI--LYTSRRVKEE--GTALGAQ----LVPLDTLCAE-------SDFIFV 1016 (1128)
Q Consensus 956 gktvGIIG~G~---IG~~vA~~l~afG-~~Vi--~~d~~~~~~~--~~~~g~~----~~~l~ell~~-------sDvV~l 1016 (1128)
-.+|||||+|. ||+..+..++..+ ++++ ++|+...+.. ++..|+. +.++++++.. .|+|++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I 116 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAI 116 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEE
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEE
Confidence 35799999999 9999888887665 6766 3465544433 4456763 3589999976 899999
Q ss_pred ecCCC
Q psy13054 1017 TCALT 1021 (1128)
Q Consensus 1017 ~lPlt 1021 (1128)
+.|..
T Consensus 117 ~tp~~ 121 (417)
T 3v5n_A 117 VTPNH 121 (417)
T ss_dssp CSCTT
T ss_pred CCCcH
Confidence 99954
No 440
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.79 E-value=0.093 Score=50.44 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=30.8
Q ss_pred CCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 699 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 699 l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
+.++++.|+|+|.+|+.+++.+...|.+|+++++.
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56789999999999999999999999999999863
No 441
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.75 E-value=0.31 Score=54.70 Aligned_cols=109 Identities=15% Similarity=0.068 Sum_probs=72.6
Q ss_pred CCCeEEEEEcChhhHH-HHHHHhhCCCEEEEEeCCCCchh---hhhcCCccc---ChHhhh-ccCCEEEEe--cC-CCcc
Q psy13054 955 KGATVGIVGLGNIGLE-TAKLLKAFKVSKILYTSRRVKEE---GTALGAQLV---PLDTLC-AESDFIFVT--CA-LTKD 1023 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~-vA~~l~afG~~Vi~~d~~~~~~~---~~~~g~~~~---~l~ell-~~sDvV~l~--lP-lt~~ 1023 (1128)
..|+|.|||.|.+|.. +|+.|+..|++|.++|.+...+. .++.|+... +.+++. .++|+|+.. +| .+|+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHH
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHH
Confidence 4578999999999995 99999999999999998754321 345566543 445565 579999975 23 2232
Q ss_pred c-----c--cccCH-HHHcc--CCC-CcEEEEcCCCcccCHHHHHHHHhcC
Q psy13054 1024 T-----E--QLIGR-KQFSL--MKP-TAILVNTSRGGLLDQEALVEFLKDK 1063 (1128)
Q Consensus 1024 T-----~--~li~~-~~l~~--mk~-ga~lIN~aRG~lVde~aL~~aL~~g 1063 (1128)
- + .++++ +.|.. +++ ..+-|-=+.|+.-...-+...|+..
T Consensus 83 ~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~ 133 (326)
T 3eag_A 83 VEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYA 133 (326)
T ss_dssp HHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHc
Confidence 1 1 23443 33443 332 3455666888887777777778764
No 442
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=91.70 E-value=0.25 Score=56.41 Aligned_cols=88 Identities=22% Similarity=0.270 Sum_probs=62.6
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc--------ChHhhhc-----cCCEEEEecC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV--------PLDTLCA-----ESDFIFVTCA 1019 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~--------~l~ell~-----~sDvV~l~lP 1019 (1128)
.|.+|.|+|.|.||...++.++.+|+ +|++.+....+.+ +++.|+..+ ++.+.++ ..|+|+-+..
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 58899999999999999999999999 7988886766655 566665431 2223222 3788888776
Q ss_pred CCcccccccCHHHHccCCCC-cEEEEcCC
Q psy13054 1020 LTKDTEQLIGRKQFSLMKPT-AILVNTSR 1047 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 1047 (1128)
.. ++ + ...++.++++ ..++.++-
T Consensus 273 ~~-~~---~-~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 273 NV-SV---M-RAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CH-HH---H-HHHHHTBCTTTCEEEECSC
T ss_pred CH-HH---H-HHHHHHhhccCCEEEEEcc
Confidence 32 21 1 3567778885 78877763
No 443
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=91.70 E-value=0.21 Score=55.40 Aligned_cols=106 Identities=17% Similarity=0.110 Sum_probs=67.5
Q ss_pred CCCeEEEEEc-ChhhHHHHHHHhhCCCEEE-EEeCCCCchhhhhcCCcc-cChHhhhc--cCCEEEEecCCCcccccccC
Q psy13054 955 KGATVGIVGL-GNIGLETAKLLKAFKVSKI-LYTSRRVKEEGTALGAQL-VPLDTLCA--ESDFIFVTCALTKDTEQLIG 1029 (1128)
Q Consensus 955 ~gktvGIIG~-G~IG~~vA~~l~afG~~Vi-~~d~~~~~~~~~~~g~~~-~~l~ell~--~sDvV~l~lPlt~~T~~li~ 1029 (1128)
..++|.|+|+ |++|+.+++.++..|++++ .++|..... ...|+.. .+++++.. ..|++++++|. +.+...+.
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~~ 82 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM--EVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAAL 82 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc--eECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHHH
Confidence 3468999999 9999999999998899854 445443111 1235554 37999988 89999999993 34444443
Q ss_pred HHHHccCCCCcEEEEcCCCc-ccCHHHHHHHHhcCCce
Q psy13054 1030 RKQFSLMKPTAILVNTSRGG-LLDQEALVEFLKDKKIG 1066 (1128)
Q Consensus 1030 ~~~l~~mk~ga~lIN~aRG~-lVde~aL~~aL~~g~i~ 1066 (1128)
+ ..+ .+-.+ +|..+-|- .-+++.|.++.++..+.
T Consensus 83 e-a~~-~Gi~~-vVi~t~G~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 83 E-AAH-AGIPL-IVLITEGIPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp H-HHH-TTCSE-EEECCSCCCHHHHHHHHHHHHHHTCE
T ss_pred H-HHH-CCCCE-EEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 2 222 22222 44444442 23456788888776553
No 444
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=91.62 E-value=2.7 Score=47.92 Aligned_cols=94 Identities=11% Similarity=0.130 Sum_probs=64.9
Q ss_pred ccCCCeEEEEEcC--hhhHHHHHHHhhCCCEEEEEeCCCCch--h--------hhhcCCcc---cChHhhhccCCEEEEe
Q psy13054 953 GLKGATVGIVGLG--NIGLETAKLLKAFKVSKILYTSRRVKE--E--------GTALGAQL---VPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 953 ~L~gktvGIIG~G--~IG~~vA~~l~afG~~Vi~~d~~~~~~--~--------~~~~g~~~---~~l~ell~~sDvV~l~ 1017 (1128)
.+.|++|++||=+ ++.+..+..+..||++|.++.|..-.+ + +...|... .+++|.++.+|||..-
T Consensus 178 ~l~gl~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~ 257 (358)
T 4h31_A 178 ALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTD 257 (358)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCceEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEE
Confidence 4789999999954 799999999999999999887643221 1 12234332 3899999999999842
Q ss_pred cC----CCccc---------ccccCHHHHccC-CCCcEEEEcC
Q psy13054 1018 CA----LTKDT---------EQLIGRKQFSLM-KPTAILVNTS 1046 (1128)
Q Consensus 1018 lP----lt~~T---------~~li~~~~l~~m-k~ga~lIN~a 1046 (1128)
.= ..++. ..-++.+.++++ ||+++|.-+.
T Consensus 258 ~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 258 VWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp CSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEECS
T ss_pred EEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECCC
Confidence 21 11111 134688888764 7888887653
No 445
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=91.59 E-value=0.17 Score=56.97 Aligned_cols=111 Identities=13% Similarity=0.139 Sum_probs=68.0
Q ss_pred cCCCeEEEEEcChhhH-HHHHHHhhC-CCEEEEEeCCCCchhhhhcCCc-ccChHhhhcc---CCEEEEecCCCcc----
Q psy13054 954 LKGATVGIVGLGNIGL-ETAKLLKAF-KVSKILYTSRRVKEEGTALGAQ-LVPLDTLCAE---SDFIFVTCALTKD---- 1023 (1128)
Q Consensus 954 L~gktvGIIG~G~IG~-~vA~~l~af-G~~Vi~~d~~~~~~~~~~~g~~-~~~l~ell~~---sDvV~l~lPlt~~---- 1023 (1128)
+.-.+|||||+|.||+ ..++.++.. +++++++.++.... .++. +.++++++.. .|+|++++|....
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~----~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~ 98 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV----EGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAA 98 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC----TTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHH
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh----cCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHH
Confidence 3446899999999999 788888776 77877654443321 3444 4589999876 8999999993221
Q ss_pred ------ccccc-------CHHHHccC------CCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1024 ------TEQLI-------GRKQFSLM------KPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1024 ------T~~li-------~~~~l~~m------k~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
-+|++ +.+....| +.-.+.++.-+--.=....+.+.+++|.|.-.
T Consensus 99 ~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~v 162 (330)
T 4ew6_A 99 YKALVAGKHVFLEKPPGATLSEVADLEALANKQGASLFASWHSRYAPAVEAAKAFLASTTIKSV 162 (330)
T ss_dssp HHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSTTHHHHHHHHHSSCEEEE
T ss_pred HHHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhccHHHHHHHHHHhcCCceEE
Confidence 12222 11111111 11234555544444456677777888887554
No 446
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=91.52 E-value=0.33 Score=56.59 Aligned_cols=107 Identities=18% Similarity=0.204 Sum_probs=64.8
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCC-------------c-hh---h-hhcC-------CcccChHhh
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRV-------------K-EE---G-TALG-------AQLVPLDTL 1007 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~-------------~-~~---~-~~~g-------~~~~~l~el 1007 (1128)
++.|++|.|.|+|++|+.+|+.|..+|++|+.+.+... + .. . ...+ .+.++.+++
T Consensus 209 ~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~~~ 288 (421)
T 2yfq_A 209 KMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDEEF 288 (421)
T ss_dssp CGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC---------------
T ss_pred CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCccch
Confidence 47899999999999999999999999999985443331 0 10 1 1111 233334454
Q ss_pred hc-cCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceE
Q psy13054 1008 CA-ESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGG 1067 (1128)
Q Consensus 1008 l~-~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~g 1067 (1128)
+. .|||++-|.+ .+.|+.+.-..+ ...+++-.+-+.+- .+ -.+.|++..|..
T Consensus 289 ~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t-~e-a~~il~~~GI~~ 341 (421)
T 2yfq_A 289 WTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT-PE-GDKVLTERGINL 341 (421)
T ss_dssp ------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC-HH-HHHHHHHHTCEE
T ss_pred hcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC-HH-HHHHHHHCCCEE
Confidence 43 6899887754 356888888888 46778888888864 33 345566655543
No 447
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.45 E-value=0.12 Score=58.23 Aligned_cols=86 Identities=19% Similarity=0.233 Sum_probs=59.6
Q ss_pred CCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc-----ChHhh----hc--cCCEEEEecCCC
Q psy13054 955 KGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV-----PLDTL----CA--ESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~-----~l~el----l~--~sDvV~l~lPlt 1021 (1128)
.|++|.|+|. |.||...++.++.+|++|++.+++..+.+ .++.|...+ ++.+. .. ..|+|+.+....
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 5889999998 99999999999999999999987665544 445554321 22221 11 378888776632
Q ss_pred cccccccCHHHHccCCCCcEEEEcC
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
.-...+..++++..+|.++
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred ------HHHHHHHhhcCCCEEEEEE
Confidence 1245677778888888776
No 448
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=91.42 E-value=1.1 Score=52.20 Aligned_cols=108 Identities=22% Similarity=0.246 Sum_probs=73.1
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhh-CCCEEEEEeCCC--------Cchh----hh-hcC-------CcccChHhhh-cc
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKA-FKVSKILYTSRR--------VKEE----GT-ALG-------AQLVPLDTLC-AE 1010 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~a-fG~~Vi~~d~~~--------~~~~----~~-~~g-------~~~~~l~ell-~~ 1010 (1128)
++.|++|.|.|+|++|+.+|+.|.. .|++|+...+.. -... .+ ..+ .+..+.++++ ..
T Consensus 206 ~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil~~~ 285 (415)
T 2tmg_A 206 DPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELLELD 285 (415)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHTTCS
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhhcCC
Confidence 4889999999999999999999998 999999443331 1111 11 111 2334556765 47
Q ss_pred CCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1011 SDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1011 sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
||+++-|... +.|+.+....++ -.+++--+-+.+ ..+| .+.|.+..+..+
T Consensus 286 ~DIliP~A~~-----n~i~~~~a~~l~-ak~V~EgAN~p~-t~~a-~~~l~~~Gi~~~ 335 (415)
T 2tmg_A 286 VDILVPAALE-----GAIHAGNAERIK-AKAVVEGANGPT-TPEA-DEILSRRGILVV 335 (415)
T ss_dssp CSEEEECSST-----TSBCHHHHTTCC-CSEEECCSSSCB-CHHH-HHHHHHTTCEEE
T ss_pred CcEEEecCCc-----CccCcccHHHcC-CeEEEeCCCccc-CHHH-HHHHHHCCCEEE
Confidence 9999988763 356777777773 567777788876 4443 355666666443
No 449
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=91.42 E-value=0.27 Score=54.97 Aligned_cols=65 Identities=8% Similarity=0.098 Sum_probs=46.8
Q ss_pred CeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCC-CCchh-hhhc-CCc-ccChHhhh-----------ccCCEEEEecCC
Q psy13054 957 ATVGIVGL-GNIGLETAKLLKAFKVSKILYTSR-RVKEE-GTAL-GAQ-LVPLDTLC-----------AESDFIFVTCAL 1020 (1128)
Q Consensus 957 ktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~-~~~~~-~~~~-g~~-~~~l~ell-----------~~sDvV~l~lPl 1020 (1128)
.++||||+ |.||+..++.++..+.+++++.++ ..+.. .... +.. +.++++++ .+.|+|+++.|.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPN 83 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCG
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCc
Confidence 57999999 789999999999889887765444 33322 2222 233 34788887 568999999994
Q ss_pred C
Q psy13054 1021 T 1021 (1128)
Q Consensus 1021 t 1021 (1128)
.
T Consensus 84 ~ 84 (318)
T 3oa2_A 84 Y 84 (318)
T ss_dssp G
T ss_pred H
Confidence 3
No 450
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=91.38 E-value=0.18 Score=56.97 Aligned_cols=65 Identities=20% Similarity=0.208 Sum_probs=47.7
Q ss_pred CeEEEEEcC-hhhHHHHHHHhhC--CCEEEE-EeCCCCchh--hhhcCC-c-ccChHhhhc--cCCEEEEecCCC
Q psy13054 957 ATVGIVGLG-NIGLETAKLLKAF--KVSKIL-YTSRRVKEE--GTALGA-Q-LVPLDTLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G-~IG~~vA~~l~af--G~~Vi~-~d~~~~~~~--~~~~g~-~-~~~l~ell~--~sDvV~l~lPlt 1021 (1128)
.+|||||+| .+|+..++.++.. ++++++ +|+...+.. ++..+. . +.++++++. +.|+|++++|..
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~ 93 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 93 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCch
Confidence 479999999 8999999999876 577754 554443333 344555 3 458999986 589999999943
No 451
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=91.28 E-value=0.14 Score=58.09 Aligned_cols=64 Identities=20% Similarity=0.253 Sum_probs=44.4
Q ss_pred eEEEEEcChhhHHHHHHHhh-CCCEEEEEeCCCCchh---hhhc------------------CCcc-cChHhhhccCCEE
Q psy13054 958 TVGIVGLGNIGLETAKLLKA-FKVSKILYTSRRVKEE---GTAL------------------GAQL-VPLDTLCAESDFI 1014 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~a-fG~~Vi~~d~~~~~~~---~~~~------------------g~~~-~~l~ell~~sDvV 1014 (1128)
+|||+|+|.||+.+++.|.. -++++++.++...... +... +... .+.++++..+|+|
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDvV 82 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV 82 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCEE
Confidence 79999999999999999876 5788877655432211 1111 1111 1466778899999
Q ss_pred EEecCCC
Q psy13054 1015 FVTCALT 1021 (1128)
Q Consensus 1015 ~l~lPlt 1021 (1128)
+.|+|..
T Consensus 83 ~~atp~~ 89 (337)
T 1cf2_P 83 IDCTPEG 89 (337)
T ss_dssp EECCSTT
T ss_pred EECCCch
Confidence 9999954
No 452
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.27 E-value=0.19 Score=54.44 Aligned_cols=66 Identities=17% Similarity=0.068 Sum_probs=47.9
Q ss_pred CCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc--ChHhh-hccCCEEEEecCCC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV--PLDTL-CAESDFIFVTCALT 1021 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~--~l~el-l~~sDvV~l~lPlt 1021 (1128)
.++|.|.|.|.||+.+++.|..-|.+|++.+++..+.. ....+++.+ ++.++ +..+|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCcc
Confidence 37899999999999999999999999999987655433 222333322 22221 78899999877654
No 453
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=91.26 E-value=0.48 Score=55.15 Aligned_cols=108 Identities=25% Similarity=0.331 Sum_probs=70.4
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCC---------Cchhh----hhcCC------------ccc-ChHh
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRR---------VKEEG----TALGA------------QLV-PLDT 1006 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~---------~~~~~----~~~g~------------~~~-~l~e 1006 (1128)
++.|++|.|.|+|++|+.+|+.|..+|++|+...+.. +.... ...+. +.. +-++
T Consensus 207 ~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~~~~~~~~~~ 286 (421)
T 1v9l_A 207 GIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDA 286 (421)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTG
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccCceEeCCchh
Confidence 4889999999999999999999999999999443331 11111 11111 223 4455
Q ss_pred hhc-cCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1007 LCA-ESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1007 ll~-~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
++. .||+++-|.- .+.|+.+....++ =.+++--+-+.+ ..+| .+.|.+..|..+
T Consensus 287 ~~~~~~Dil~P~A~-----~~~I~~~~a~~l~-ak~V~EgAN~p~-t~~a-~~~l~~~Gi~~~ 341 (421)
T 1v9l_A 287 IFKLDVDIFVPAAI-----ENVIRGDNAGLVK-ARLVVEGANGPT-TPEA-ERILYERGVVVV 341 (421)
T ss_dssp GGGCCCSEEEECSC-----SSCBCTTTTTTCC-CSEEECCSSSCB-CHHH-HHHHHTTTCEEE
T ss_pred hhcCCccEEEecCc-----CCccchhhHHHcC-ceEEEecCCCcC-CHHH-HHHHHHCCCEEe
Confidence 554 6999987763 3456666666664 357777777775 4444 466777766554
No 454
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=91.23 E-value=0.13 Score=58.49 Aligned_cols=65 Identities=12% Similarity=0.119 Sum_probs=45.3
Q ss_pred CeEEEEEcChhhHHHHHHHhhC--------CCEEEE-EeCCCCchh--hhhcCCc--ccChHhhhcc--CCEEEEecCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF--------KVSKIL-YTSRRVKEE--GTALGAQ--LVPLDTLCAE--SDFIFVTCALT 1021 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af--------G~~Vi~-~d~~~~~~~--~~~~g~~--~~~l~ell~~--sDvV~l~lPlt 1021 (1128)
-+|||||+|.||+.-++.++.. ++++++ +|++..+.. ++.+++. +.+++++++. -|+|++++|..
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~ 86 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGD 86 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGG
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChH
Confidence 4799999999999877766543 345554 454443333 4456653 3589999964 79999999943
No 455
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=91.22 E-value=0.15 Score=59.64 Aligned_cols=66 Identities=18% Similarity=0.240 Sum_probs=49.3
Q ss_pred CCeEEEEEc----ChhhHHHHHHHhhC--CCEEE-EEeCCCCchh--hhhcCCc----ccChHhhhc--cCCEEEEecCC
Q psy13054 956 GATVGIVGL----GNIGLETAKLLKAF--KVSKI-LYTSRRVKEE--GTALGAQ----LVPLDTLCA--ESDFIFVTCAL 1020 (1128)
Q Consensus 956 gktvGIIG~----G~IG~~vA~~l~af--G~~Vi-~~d~~~~~~~--~~~~g~~----~~~l~ell~--~sDvV~l~lPl 1020 (1128)
-.+|||||+ |.||+..++.++.. +++++ ++|+...+.. ++..++. +.++++++. +.|+|++++|.
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 99 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQV 99 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCH
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCc
Confidence 357999999 99999999999887 78875 4554443332 3445653 458999996 68999999994
Q ss_pred C
Q psy13054 1021 T 1021 (1128)
Q Consensus 1021 t 1021 (1128)
.
T Consensus 100 ~ 100 (438)
T 3btv_A 100 A 100 (438)
T ss_dssp H
T ss_pred H
Confidence 3
No 456
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=91.19 E-value=0.27 Score=56.00 Aligned_cols=65 Identities=8% Similarity=0.090 Sum_probs=47.0
Q ss_pred CCeEEEEEcChhhH-HHHHHHhhCCCEEEEE-eCCCCchh--hhhcCC-c-ccChHhhhcc--CCEEEEecCC
Q psy13054 956 GATVGIVGLGNIGL-ETAKLLKAFKVSKILY-TSRRVKEE--GTALGA-Q-LVPLDTLCAE--SDFIFVTCAL 1020 (1128)
Q Consensus 956 gktvGIIG~G~IG~-~vA~~l~afG~~Vi~~-d~~~~~~~--~~~~g~-~-~~~l~ell~~--sDvV~l~lPl 1020 (1128)
-.+|||||+|.+|. ..+..++.-+++++++ |+...+.. ++..+. . +.++++++.. .|+|+++.|.
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~ 98 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVS 98 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCH
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 45899999999995 5777777788987755 44333333 344553 2 4589999976 8999999994
No 457
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=91.18 E-value=0.58 Score=54.48 Aligned_cols=108 Identities=18% Similarity=0.222 Sum_probs=74.3
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCC--------ch-h---h-hhcC------CcccChHhhh-ccCC
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRV--------KE-E---G-TALG------AQLVPLDTLC-AESD 1012 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~--------~~-~---~-~~~g------~~~~~l~ell-~~sD 1012 (1128)
++.|+||.|-|+|++|+..|+.|..+|++|+.+.+... +. . . .+.+ .+.++-++++ ..||
T Consensus 218 ~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~~D 297 (424)
T 3k92_A 218 KLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKDCD 297 (424)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSCCS
T ss_pred CcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecccc
Confidence 48899999999999999999999999999875433331 11 1 1 1112 3445556654 4699
Q ss_pred EEEEecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1013 FIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1013 vV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
|++=|... +.|+.+....++ -.+++--+-+.+ .. +-.+.|.+..|..+
T Consensus 298 IliPcA~~-----n~I~~~~a~~l~-ak~V~EgAN~p~-t~-eA~~iL~~rGI~~~ 345 (424)
T 3k92_A 298 ILVPAAIS-----NQITAKNAHNIQ-ASIVVERANGPT-TI-DATKILNERGVLLV 345 (424)
T ss_dssp EEEECSCS-----SCBCTTTGGGCC-CSEEECCSSSCB-CH-HHHHHHHHTTCEEE
T ss_pred EEeecCcc-----cccChhhHhhcC-ceEEEcCCCCCC-CH-HHHHHHHHCCCEEE
Confidence 99866553 567777777773 667788888885 43 34577777777554
No 458
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.13 E-value=0.15 Score=57.95 Aligned_cols=87 Identities=22% Similarity=0.216 Sum_probs=58.5
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc------ChHh----hhc--cCCEEEEecCCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV------PLDT----LCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~------~l~e----ll~--~sDvV~l~lPlt 1021 (1128)
.|++|.|+|.|.||...++.++.+|++|++.+....+.+ +++.|+..+ ++.+ +.. ..|+|+-++. .
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h
Confidence 588999999999999999999999999999886655444 455555321 2222 111 4677777665 2
Q ss_pred cccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
++ -...++.++++..+|.++-
T Consensus 268 -~~----~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 268 -AG----LGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp -SC----HHHHHHHEEEEEEEEEECC
T ss_pred -HH----HHHHHHHhhcCCEEEEEec
Confidence 11 1345666777777776653
No 459
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=91.12 E-value=0.26 Score=55.14 Aligned_cols=108 Identities=14% Similarity=0.086 Sum_probs=70.6
Q ss_pred ccCCCeEEEE-Ec-ChhhHHHHHHHhhCCCEEE-EEeCCCCchhhhhcCCccc-ChHhhhc--cCCEEEEecCCCccccc
Q psy13054 953 GLKGATVGIV-GL-GNIGLETAKLLKAFKVSKI-LYTSRRVKEEGTALGAQLV-PLDTLCA--ESDFIFVTCALTKDTEQ 1026 (1128)
Q Consensus 953 ~L~gktvGII-G~-G~IG~~vA~~l~afG~~Vi-~~d~~~~~~~~~~~g~~~~-~l~ell~--~sDvV~l~lPlt~~T~~ 1026 (1128)
-+..+++.|| |+ |+.|+.+++.++..|++++ .+||..... .-.|+... +++|+.+ ..|++++++|. +....
T Consensus 10 l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~vD~avI~vP~-~~~~~ 86 (305)
T 2fp4_A 10 YVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGK--THLGLPVFNTVKEAKEQTGATASVIYVPP-PFAAA 86 (305)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHH
T ss_pred HhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcc--eECCeeeechHHHhhhcCCCCEEEEecCH-HHHHH
Confidence 3567889999 99 9999999999999999844 344432111 12455544 7999998 89999999994 33333
Q ss_pred ccCHHHHccCCCCcEEEEcCCCcc-cCHHHHHHHHhcC-Cce
Q psy13054 1027 LIGRKQFSLMKPTAILVNTSRGGL-LDQEALVEFLKDK-KIG 1066 (1128)
Q Consensus 1027 li~~~~l~~mk~ga~lIN~aRG~l-Vde~aL~~aL~~g-~i~ 1066 (1128)
.+.+ ..+ ..- ..+|+.+-|-. -|+..+.+..++. .+.
T Consensus 87 ~~~e-~i~-~Gi-~~iv~~t~G~~~~~~~~l~~~a~~~~gi~ 125 (305)
T 2fp4_A 87 AINE-AID-AEV-PLVVCITEGIPQQDMVRVKHRLLRQGKTR 125 (305)
T ss_dssp HHHH-HHH-TTC-SEEEECCCCCCHHHHHHHHHHHTTCSSCE
T ss_pred HHHH-HHH-CCC-CEEEEECCCCChHHHHHHHHHHHhcCCcE
Confidence 4432 222 222 23456666643 2344788888876 553
No 460
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=91.12 E-value=0.14 Score=58.59 Aligned_cols=88 Identities=26% Similarity=0.334 Sum_probs=62.4
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc------ChHhhhc--------cCCEEEEec
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV------PLDTLCA--------ESDFIFVTC 1018 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~------~l~ell~--------~sDvV~l~l 1018 (1128)
.|++|.|+|.|.+|...++.++.+|+ +|++.+....+.+ +++.|+..+ ++.+.+. ..|+|+-+.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 57899999999999999999999999 8888876555444 556665431 3434333 378888876
Q ss_pred CCCcccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1019 ALTKDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1019 Plt~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
... ++ + ...++.++++..+|.++-
T Consensus 262 G~~-~~---~-~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 262 GVA-ET---V-KQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CCH-HH---H-HHHHHHEEEEEEEEECSC
T ss_pred CCH-HH---H-HHHHHHhccCCEEEEEec
Confidence 532 21 1 356677888888888764
No 461
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=91.10 E-value=0.36 Score=50.02 Aligned_cols=91 Identities=10% Similarity=0.073 Sum_probs=59.6
Q ss_pred eEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc--ChH----hhhccCCEEEEecCCC--cccc--
Q psy13054 958 TVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV--PLD----TLCAESDFIFVTCALT--KDTE-- 1025 (1128)
Q Consensus 958 tvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~--~l~----ell~~sDvV~l~lPlt--~~T~-- 1025 (1128)
+|.|.|. |.||+.+++.|..-|.+|++.+++..+.. ....+++.+ ++. +.+...|+|+.++... +...
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~~~~ 81 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGYL 81 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSCTHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcchhhH
Confidence 6899998 99999999999999999999986544332 112233321 332 6788999999888653 1110
Q ss_pred cc-cCHHHHccCC-CCcEEEEcCCC
Q psy13054 1026 QL-IGRKQFSLMK-PTAILVNTSRG 1048 (1128)
Q Consensus 1026 ~l-i~~~~l~~mk-~ga~lIN~aRG 1048 (1128)
++ .....++.|+ .+..+|++|..
T Consensus 82 n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 82 HLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp HHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecc
Confidence 11 1234566664 35788888764
No 462
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.08 E-value=0.18 Score=48.12 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=29.9
Q ss_pred CCEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 701 GATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 701 gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
+++++|+|+|.+|+.+|+.|...|.+|+++|+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 478999999999999999999999999999873
No 463
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.01 E-value=0.14 Score=57.75 Aligned_cols=87 Identities=15% Similarity=0.121 Sum_probs=58.9
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCcc------cChHhhhc-----cCCEEEEecCCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQL------VPLDTLCA-----ESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~------~~l~ell~-----~sDvV~l~lPlt 1021 (1128)
.|++|.|+|.|.||...++.++.+|+ +|++.++...+.+ .++. ... .++.+.+. ..|+|+.++...
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 242 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE 242 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH
Confidence 68899999999999999999999999 8998876544433 3332 221 12333322 468888777632
Q ss_pred cccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
+. -...++.|+++..+|.++.
T Consensus 243 ~~-----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 243 AA-----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HH-----HHHHHHHEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHhcCCEEEEEec
Confidence 21 1345677788888887764
No 464
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=91.00 E-value=0.18 Score=57.89 Aligned_cols=65 Identities=15% Similarity=0.150 Sum_probs=48.2
Q ss_pred CCeEEEEEcChhhHHHHHHHhhC--CCEEEEE-eCCCCchh--hhhcCCcc-cChHhhhccCCEEEEecCCC
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAF--KVSKILY-TSRRVKEE--GTALGAQL-VPLDTLCAESDFIFVTCALT 1021 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~af--G~~Vi~~-d~~~~~~~--~~~~g~~~-~~l~ell~~sDvV~l~lPlt 1021 (1128)
-.+|||||+| +|+.-++.++.. +++++++ |+...+.. ++.+|+.. .++++++...|+|++++|..
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 3579999999 799888877665 6787755 44444333 55677764 48999999999999999854
No 465
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.98 E-value=0.15 Score=49.46 Aligned_cols=34 Identities=12% Similarity=0.054 Sum_probs=30.8
Q ss_pred CCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 700 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 700 ~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
.++++.|+|+|++|+.+|+.|...|.+|+++|..
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 4578999999999999999999999999999973
No 466
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=90.92 E-value=1.6 Score=49.68 Aligned_cols=94 Identities=14% Similarity=0.141 Sum_probs=64.1
Q ss_pred ccCCCeEEEEEcC-hhhHHHHHHHhhCCCEEEEEeCCCCc--hhh----h------hcCC--cc-cChHhhhccCCEEEE
Q psy13054 953 GLKGATVGIVGLG-NIGLETAKLLKAFKVSKILYTSRRVK--EEG----T------ALGA--QL-VPLDTLCAESDFIFV 1016 (1128)
Q Consensus 953 ~L~gktvGIIG~G-~IG~~vA~~l~afG~~Vi~~d~~~~~--~~~----~------~~g~--~~-~~l~ell~~sDvV~l 1016 (1128)
.+.|++|++||=+ ++.+..+..+..||++|.+..|..-. +.. . ..|. .. .+++|.++.+|||..
T Consensus 185 ~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvyt 264 (353)
T 3sds_A 185 GLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVT 264 (353)
T ss_dssp SCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEe
Confidence 5799999999976 67778888889999999988776432 111 1 1122 22 489999999999986
Q ss_pred ec--CCCcc----------cccccCHHHHcc--CCCCcEEEEcC
Q psy13054 1017 TC--ALTKD----------TEQLIGRKQFSL--MKPTAILVNTS 1046 (1128)
Q Consensus 1017 ~l--Plt~~----------T~~li~~~~l~~--mk~ga~lIN~a 1046 (1128)
-. +...+ ....++.+.++. +|++++|.-+.
T Consensus 265 d~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 265 DTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp CCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred CCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 33 22221 113468888887 78888887664
No 467
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=90.86 E-value=0.14 Score=54.35 Aligned_cols=66 Identities=18% Similarity=0.138 Sum_probs=45.1
Q ss_pred CCeEEEEEcChhhHHHHHH--HhhCCCEEEEEeCCCCc-hh-h-hhcCCcc---cChHhhhcc--CCEEEEecCCC
Q psy13054 956 GATVGIVGLGNIGLETAKL--LKAFKVSKILYTSRRVK-EE-G-TALGAQL---VPLDTLCAE--SDFIFVTCALT 1021 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~--l~afG~~Vi~~d~~~~~-~~-~-~~~g~~~---~~l~ell~~--sDvV~l~lPlt 1021 (1128)
.++++|||+|++|+++++. ....|++++++-+..+. .. . .-.|+.. .++++++++ .|++++++|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 4579999999999999997 35678888865433333 22 2 2234432 367777764 89999999943
No 468
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.86 E-value=0.38 Score=56.64 Aligned_cols=93 Identities=17% Similarity=0.225 Sum_probs=67.1
Q ss_pred ccCCCeEEEEEcCh----------hhHHHHHHHhhCCCEEEEEeCCCCchhhhhcC--Cccc-ChHhhhccCCEEEEecC
Q psy13054 953 GLKGATVGIVGLGN----------IGLETAKLLKAFKVSKILYTSRRVKEEGTALG--AQLV-PLDTLCAESDFIFVTCA 1019 (1128)
Q Consensus 953 ~L~gktvGIIG~G~----------IG~~vA~~l~afG~~Vi~~d~~~~~~~~~~~g--~~~~-~l~ell~~sDvV~l~lP 1019 (1128)
.+.|++|+|+|+-- =...+++.|...|++|.+|||..........+ +.++ ++++.++.+|+|+++.+
T Consensus 315 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~ 394 (450)
T 3gg2_A 315 NVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVTE 394 (450)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEECSC
T ss_pred cCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEccC
Confidence 57899999999852 36899999999999999999987532222223 4444 67899999999999888
Q ss_pred CCcccccccCHHHHc-cCCCCcEEEEcCCCc
Q psy13054 1020 LTKDTEQLIGRKQFS-LMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1020 lt~~T~~li~~~~l~-~mk~ga~lIN~aRG~ 1049 (1128)
-. +-+. ++.+.+. .|+ +.+++++ |+-
T Consensus 395 ~~-~f~~-~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 395 WK-EFRM-PDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp CG-GGSS-CCHHHHHHHSS-SCEEEES-SCC
T ss_pred CH-HHhh-cCHHHHHHhcC-CCEEEEC-CCC
Confidence 44 3333 4555554 465 6678885 654
No 469
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=90.85 E-value=0.13 Score=58.50 Aligned_cols=88 Identities=14% Similarity=0.125 Sum_probs=61.1
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc------ChHhhhc-----cCCEEEEecCCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV------PLDTLCA-----ESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~------~l~ell~-----~sDvV~l~lPlt 1021 (1128)
.|++|.|+|.|.||...++.++.+|+ +|++.+....+.+ +++.|...+ ++.+.+. ..|+|+.+....
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 57899999999999999999999999 6888876555444 455565321 2322222 368888777632
Q ss_pred cccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
++ + ...++.++++..+|.++-
T Consensus 270 -~~---~-~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 270 -EI---L-KQGVDALGILGKIAVVGA 290 (371)
T ss_dssp -HH---H-HHHHHTEEEEEEEEECCC
T ss_pred -HH---H-HHHHHHHhcCCEEEEeCC
Confidence 21 1 356777888888888764
No 470
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=90.79 E-value=0.93 Score=52.75 Aligned_cols=108 Identities=20% Similarity=0.245 Sum_probs=71.9
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCCEEE-EEeCC-------CCchh-----hhhcC-Cc--ccChHhhh-ccCCEEE
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKI-LYTSR-------RVKEE-----GTALG-AQ--LVPLDTLC-AESDFIF 1015 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~~Vi-~~d~~-------~~~~~-----~~~~g-~~--~~~l~ell-~~sDvV~ 1015 (1128)
++.|++|.|.|+|++|+.+|+.|...|++|+ +.|.. .-+.+ ..+.+ +. ..+-++++ -.|||++
T Consensus 215 ~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DVli 294 (419)
T 3aoe_E 215 DLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEVLV 294 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSEEE
T ss_pred CccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceEEE
Confidence 4789999999999999999999999999999 43431 11111 11112 11 12223443 4799999
Q ss_pred EecCCCcccccccCHHHHccCCCCcEEEEcCCCcccCHHHHHHHHhcCCceEE
Q psy13054 1016 VTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGA 1068 (1128)
Q Consensus 1016 l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~~g~i~ga 1068 (1128)
-|.. .+.|+.+.-..++ =.+++.-+-+.+- .+| .+.|.+..|..+
T Consensus 295 P~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~t-~~A-~~~L~~~Gi~~~ 339 (419)
T 3aoe_E 295 LAAR-----EGALDGDRARQVQ-AQAVVEVANFGLN-PEA-EAYLLGKGALVV 339 (419)
T ss_dssp ECSC-----TTCBCHHHHTTCC-CSEEEECSTTCBC-HHH-HHHHHHHTCEEE
T ss_pred eccc-----ccccccchHhhCC-ceEEEECCCCcCC-HHH-HHHHHHCCCEEE
Confidence 7754 3567777777775 4588899988863 443 466777666554
No 471
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.77 E-value=0.48 Score=52.05 Aligned_cols=38 Identities=24% Similarity=0.371 Sum_probs=33.6
Q ss_pred cCCCeEEEEE-cChhhHHHHHHHhhCCCEEEEEeCCCCc
Q psy13054 954 LKGATVGIVG-LGNIGLETAKLLKAFKVSKILYTSRRVK 991 (1128)
Q Consensus 954 L~gktvGIIG-~G~IG~~vA~~l~afG~~Vi~~d~~~~~ 991 (1128)
+.||++.|+| .|.||+++++.|...|++|++++++..+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~ 155 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDK 155 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHH
Confidence 6789999999 9999999999999999999888865443
No 472
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=90.77 E-value=1.5 Score=48.89 Aligned_cols=65 Identities=22% Similarity=0.352 Sum_probs=50.3
Q ss_pred ccCCCeEEEEEc---ChhhHHHHHHHhhC-CCEEEEEeCCCCc--hh----hhhcCCcc---cChHhhhccCCEEEEe
Q psy13054 953 GLKGATVGIVGL---GNIGLETAKLLKAF-KVSKILYTSRRVK--EE----GTALGAQL---VPLDTLCAESDFIFVT 1017 (1128)
Q Consensus 953 ~L~gktvGIIG~---G~IG~~vA~~l~af-G~~Vi~~d~~~~~--~~----~~~~g~~~---~~l~ell~~sDvV~l~ 1017 (1128)
.+.|++|++||= |++.+..+..+..| |++|.+..|..-. +. +.+.|.+. .+++|.++.+|||..-
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~ 225 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVT 225 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEEC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeC
Confidence 368999999998 58999999999999 9999988765322 11 23345543 4899999999999964
No 473
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.72 E-value=0.15 Score=57.38 Aligned_cols=87 Identities=20% Similarity=0.181 Sum_probs=62.1
Q ss_pred CCCeEEEEEcC-hhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc------ChHhhh------ccCCEEEEecCC
Q psy13054 955 KGATVGIVGLG-NIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV------PLDTLC------AESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~G-~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~------~l~ell------~~sDvV~l~lPl 1020 (1128)
.|++|.|+|.| .||...++.++.+|++|++.+....+.+ ..+.|...+ ++.+.+ ...|+|+.++..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 57899999998 9999999999999999999987766554 555565321 232222 147888877663
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
+.+ .+.+..++++..+|.++-
T Consensus 224 -~~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 224 -PDG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp -HHH-----HHHHHTEEEEEEEEECCC
T ss_pred -hhH-----HHHHHHhcCCCEEEEEee
Confidence 222 234577888888888864
No 474
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.67 E-value=0.44 Score=56.24 Aligned_cols=95 Identities=13% Similarity=0.167 Sum_probs=69.0
Q ss_pred ccCCCeEEEEEcCh----------hhHHHHHHHhhCCCEEEEEeCCCCchhh-hhc-------------CCccc-ChHhh
Q psy13054 953 GLKGATVGIVGLGN----------IGLETAKLLKAFKVSKILYTSRRVKEEG-TAL-------------GAQLV-PLDTL 1007 (1128)
Q Consensus 953 ~L~gktvGIIG~G~----------IG~~vA~~l~afG~~Vi~~d~~~~~~~~-~~~-------------g~~~~-~l~el 1007 (1128)
.+.|++|+|+|+.- -...+++.|...|++|.+|||....... ... ++.+. +..+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 47899999999874 6789999999999999999998654431 111 23333 67889
Q ss_pred hccCCEEEEecCCCcccccccCHHHH-ccCCCCcEEEEcCCCcc
Q psy13054 1008 CAESDFIFVTCALTKDTEQLIGRKQF-SLMKPTAILVNTSRGGL 1050 (1128)
Q Consensus 1008 l~~sDvV~l~lPlt~~T~~li~~~~l-~~mk~ga~lIN~aRG~l 1050 (1128)
++.+|+|+++..-. +.+. ++.+.+ +.|+...+++++ |+-+
T Consensus 406 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~~~~~i~D~-r~~~ 446 (467)
T 2q3e_A 406 CDGAHAVVICTEWD-MFKE-LDYERIHKKMLKPAFIFDG-RRVL 446 (467)
T ss_dssp HTTCSEEEECSCCG-GGGG-SCHHHHHHHSCSSCEEEES-SCTT
T ss_pred HhCCcEEEEecCCh-hhhc-CCHHHHHHhcCCCCEEEeC-CCcC
Confidence 99999999998854 4443 365555 567776668876 6543
No 475
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.52 E-value=0.16 Score=53.55 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=29.8
Q ss_pred CCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 700 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 700 ~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
.++++||||+|++|+.+|+.+...|.+|.+|++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999999999999999999999999864
No 476
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=90.49 E-value=0.17 Score=57.25 Aligned_cols=101 Identities=14% Similarity=0.102 Sum_probs=58.3
Q ss_pred eEEEEEcChhhHHHHHHHhhC---------CCEEEEEeCCC-CchhhhhcCCcccChHhhhccCCEEEEecCCCcccccc
Q psy13054 958 TVGIVGLGNIGLETAKLLKAF---------KVSKILYTSRR-VKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQL 1027 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~af---------G~~Vi~~d~~~-~~~~~~~~g~~~~~l~ell~~sDvV~l~lPlt~~T~~l 1027 (1128)
+|||||+|.||+.+++.++.. +++++.+-++. .+...........++++++ +.|+|+.+.|.......
T Consensus 5 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a~~- 82 (332)
T 2ejw_A 5 KIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-EADLVVEAMGGVEAPLR- 82 (332)
T ss_dssp EEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-TCSEEEECCCCSHHHHH-
T ss_pred EEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-CCCEEEECCCCcHHHHH-
Confidence 699999999999999998665 46665544333 2221111111234788888 99999999885421111
Q ss_pred cCHHHHccCCCCcEEEEcCCCcc-cCHHHHHHHHhcC
Q psy13054 1028 IGRKQFSLMKPTAILVNTSRGGL-LDQEALVEFLKDK 1063 (1128)
Q Consensus 1028 i~~~~l~~mk~ga~lIN~aRG~l-Vde~aL~~aL~~g 1063 (1128)
-..+.++.|--+|...-..+ -.-+.|.++.++.
T Consensus 83 ---~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 83 ---LVLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp ---HHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred ---HHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 11234444544444211111 2456666666655
No 477
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.44 E-value=0.19 Score=49.06 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=30.1
Q ss_pred CEEEEEecChhhHHHHHHHhhCCCeEEEEcCC
Q psy13054 702 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSR 733 (1128)
Q Consensus 702 ktvGIiG~G~IG~~va~r~~afg~~vi~y~~~ 733 (1128)
+++.|+|+|++|+.+|+.|+..|.+|+++|..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 57999999999999999999999999999984
No 478
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.38 E-value=0.16 Score=57.26 Aligned_cols=88 Identities=15% Similarity=0.237 Sum_probs=60.7
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhC--CCEEEEEeCCCCchh-hhhcCCccc-ChH-------hhhc--cCCEEEEecCCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAF--KVSKILYTSRRVKEE-GTALGAQLV-PLD-------TLCA--ESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~af--G~~Vi~~d~~~~~~~-~~~~g~~~~-~l~-------ell~--~sDvV~l~lPlt 1021 (1128)
.|++|.|+|.|.||...++.++.+ |++|++.++...+.+ +++.|+..+ +.. ++.. ..|+|+.++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 588999999999999999999999 999988876554444 555665432 221 1221 468888777632
Q ss_pred cccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
+. + ...++.++++..+|.++-
T Consensus 250 ~~----~-~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 250 ET----T-YNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp HH----H-HHHHHHEEEEEEEEECCC
T ss_pred HH----H-HHHHHHhhcCCEEEEeCC
Confidence 11 1 345677778888877763
No 479
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.33 E-value=0.16 Score=56.33 Aligned_cols=85 Identities=14% Similarity=0.151 Sum_probs=59.0
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc--ChHhhhccCCEEEEecCCCcccccccCHH
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV--PLDTLCAESDFIFVTCALTKDTEQLIGRK 1031 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~--~l~ell~~sDvV~l~lPlt~~T~~li~~~ 1031 (1128)
.|++|.|+|.|.+|...++.++.+|++|++.+ +..+.+ .++.|+..+ +.+++-...|+|+-+... +.+ ..
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~-~~~-----~~ 214 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNS-QNA-----AA 214 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------T
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCc-hhH-----HH
Confidence 58899999999999999999999999999988 555544 556665432 223333457888876653 222 34
Q ss_pred HHccCCCCcEEEEcC
Q psy13054 1032 QFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1032 ~l~~mk~ga~lIN~a 1046 (1128)
.++.++++..+|.++
T Consensus 215 ~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 215 LVPSLKANGHIICIQ 229 (315)
T ss_dssp TGGGEEEEEEEEEEC
T ss_pred HHHHhcCCCEEEEEe
Confidence 567788888888874
No 480
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=90.31 E-value=0.25 Score=55.30 Aligned_cols=111 Identities=15% Similarity=0.128 Sum_probs=68.7
Q ss_pred CeEEEEEcChhhHHHHHHHhhCC--CEEEEEeCCCCchh--hhh--c------CCcc-cChHhhhccCCEEEEecCCCcc
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFK--VSKILYTSRRVKEE--GTA--L------GAQL-VPLDTLCAESDFIFVTCALTKD 1023 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG--~~Vi~~d~~~~~~~--~~~--~------g~~~-~~l~ell~~sDvV~l~lPlt~~ 1023 (1128)
++|+|||.|.+|..++-.+...+ -+++.+|....+.+ +.+ . ..+. .+-.+.++.||+|+++.+...
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~- 79 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQ- 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCC-
Confidence 47999999999999999997655 58999987654332 111 1 1111 133677999999999987432
Q ss_pred cccc-------cCH-------HHHccCCCCcEEEEcCCCcccCHHHHHHH--HhcCCceEE
Q psy13054 1024 TEQL-------IGR-------KQFSLMKPTAILVNTSRGGLLDQEALVEF--LKDKKIGGA 1068 (1128)
Q Consensus 1024 T~~l-------i~~-------~~l~~mk~ga~lIN~aRG~lVde~aL~~a--L~~g~i~ga 1068 (1128)
..++ .|. +.+....|++++||++-.-=+....+.+. +...++.|.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p~~rviG~ 140 (310)
T 2xxj_A 80 RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLPPGRVVGS 140 (310)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHHcCCCHHHEEec
Confidence 2222 011 12333478999999865444444444444 333466565
No 481
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=90.30 E-value=0.3 Score=57.22 Aligned_cols=66 Identities=12% Similarity=0.158 Sum_probs=47.0
Q ss_pred CCeEEEEEcChhhHHHHHHHhhC-CCEEEE-EeCCCCchh-hh----hcC---Cc-cc----ChHhhhc--cCCEEEEec
Q psy13054 956 GATVGIVGLGNIGLETAKLLKAF-KVSKIL-YTSRRVKEE-GT----ALG---AQ-LV----PLDTLCA--ESDFIFVTC 1018 (1128)
Q Consensus 956 gktvGIIG~G~IG~~vA~~l~af-G~~Vi~-~d~~~~~~~-~~----~~g---~~-~~----~l~ell~--~sDvV~l~l 1018 (1128)
-.+|||||+|.||+..++.++.. |+++++ +|+...+.. .. ..| .. +. +++++++ +.|+|++++
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECC
T ss_pred CceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcC
Confidence 35799999999999999998876 777764 454433332 11 234 23 34 8999997 589999999
Q ss_pred CCC
Q psy13054 1019 ALT 1021 (1128)
Q Consensus 1019 Plt 1021 (1128)
|..
T Consensus 100 p~~ 102 (444)
T 2ixa_A 100 PWE 102 (444)
T ss_dssp CGG
T ss_pred CcH
Confidence 943
No 482
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=90.28 E-value=0.55 Score=53.29 Aligned_cols=65 Identities=20% Similarity=0.206 Sum_probs=42.9
Q ss_pred CeEEEEEcChhhHHHHHHHhhC-CCEEEEEeCCCCchh---hhhc--------------------CCcc-cChHhhhccC
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAF-KVSKILYTSRRVKEE---GTAL--------------------GAQL-VPLDTLCAES 1011 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~af-G~~Vi~~d~~~~~~~---~~~~--------------------g~~~-~~l~ell~~s 1011 (1128)
.+|||+|+|+||+.+++.+... ++++++++....... .+.. +... .+.++++...
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 3799999999999999998765 688777754322111 0100 1111 1345666799
Q ss_pred CEEEEecCCC
Q psy13054 1012 DFIFVTCALT 1021 (1128)
Q Consensus 1012 DvV~l~lPlt 1021 (1128)
|+|+.|+|..
T Consensus 83 DiV~eatg~~ 92 (343)
T 2yyy_A 83 DIVVDGAPKK 92 (343)
T ss_dssp SEEEECCCTT
T ss_pred CEEEECCCcc
Confidence 9999998854
No 483
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=90.27 E-value=0.4 Score=54.14 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=67.7
Q ss_pred eEEEEEcChhhHHHHHHHhh---------CCCEEEEEeCCCCch-------h-h--h-hcCCccc--ChHhhhc--cCCE
Q psy13054 958 TVGIVGLGNIGLETAKLLKA---------FKVSKILYTSRRVKE-------E-G--T-ALGAQLV--PLDTLCA--ESDF 1013 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~a---------fG~~Vi~~d~~~~~~-------~-~--~-~~g~~~~--~l~ell~--~sDv 1013 (1128)
+|||||+|.||+.+++.++. .+.++++.-++.... . . . ..+..+. ++++++. +.|+
T Consensus 4 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iDv 83 (327)
T 3do5_A 4 KIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYDV 83 (327)
T ss_dssp EEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCSE
T ss_pred EEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCCE
Confidence 69999999999999999975 477777665443211 0 0 0 1122222 8999886 4899
Q ss_pred EEEecCCCcccccccCHHHHccCCCCcEEEEcCCCccc-CHHHHHHHHhcCCc
Q psy13054 1014 IFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLL-DQEALVEFLKDKKI 1065 (1128)
Q Consensus 1014 V~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~lV-de~aL~~aL~~g~i 1065 (1128)
|+.++|....+-. .-.-..+.++.|.-+|...-+.+. +-+.|.++.++...
T Consensus 84 Vv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~ 135 (327)
T 3do5_A 84 LIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGV 135 (327)
T ss_dssp EEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTC
T ss_pred EEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCC
Confidence 9999995432211 112346677888888877555543 55677777666654
No 484
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.20 E-value=0.17 Score=57.09 Aligned_cols=87 Identities=17% Similarity=0.226 Sum_probs=59.1
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchh-hhhcCCccc------ChHh-hhc-----cCCEEEEecCC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEE-GTALGAQLV------PLDT-LCA-----ESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~-~~~~g~~~~------~l~e-ll~-----~sDvV~l~lPl 1020 (1128)
.|.+|.|+|.|.||...++.++.+|+ +|++.++...+.+ +++.|+..+ ++.+ +.+ ..|+|+-+...
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 57899999999999999999999999 7888876555444 555665421 2222 211 36888776653
Q ss_pred CcccccccCHHHHccCCCCcEEEEcC
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
.+. -...++.++++..++.++
T Consensus 246 ~~~-----~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VHT-----FAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TTH-----HHHHHHHEEEEEEEEECC
T ss_pred hHH-----HHHHHHHHhcCCEEEEec
Confidence 211 134566777777777775
No 485
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.18 E-value=0.14 Score=58.06 Aligned_cols=87 Identities=20% Similarity=0.189 Sum_probs=61.4
Q ss_pred CCCeEEEE-EcChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc------cChHhhhc-----cCCEEEEecCCC
Q psy13054 955 KGATVGIV-GLGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL------VPLDTLCA-----ESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGII-G~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~------~~l~ell~-----~sDvV~l~lPlt 1021 (1128)
.|++|.|+ |.|.||..+++.++..|++|++.+.+..+.+ .++.|... .++.+.+. ..|+|+.++...
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~ 246 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA 246 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH
Confidence 57899999 6899999999999999999999886655444 44555432 12333322 478888777631
Q ss_pred cccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
. -...+..|+++..+|.++.
T Consensus 247 -----~-~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 247 -----Y-FERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp -----G-HHHHHHTEEEEEEEEECCC
T ss_pred -----H-HHHHHHHhccCCEEEEEEe
Confidence 1 2456777888888888764
No 486
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.11 E-value=0.2 Score=46.40 Aligned_cols=34 Identities=29% Similarity=0.299 Sum_probs=30.7
Q ss_pred CCCEEEEEecChhhHHHHHHHhhCC-CeEEEEcCC
Q psy13054 700 KGATVGIVGLGNIGLETAKLLKAFK-VSKILYTSR 733 (1128)
Q Consensus 700 ~gktvGIiG~G~IG~~va~r~~afg-~~vi~y~~~ 733 (1128)
.+++++|+|.|.||+.+++.+...| .+|+++++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4689999999999999999999999 888888874
No 487
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.02 E-value=0.13 Score=57.76 Aligned_cols=89 Identities=18% Similarity=0.095 Sum_probs=62.3
Q ss_pred CCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh-h-hhcCCccc------ChHhhhc-----cCCEEEEecCC
Q psy13054 955 KGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE-G-TALGAQLV------PLDTLCA-----ESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~-~~~g~~~~------~l~ell~-----~sDvV~l~lPl 1020 (1128)
.|++|.|+|. |.||..+++.++..|++|++.+++..+.+ . ++.|...+ ++.+.+. ..|+|+.+...
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 5889999999 99999999999999999999886655444 3 45565321 2222221 37888876652
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCCCc
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
+ .-...+..|+++..+|.++...
T Consensus 229 -~-----~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 229 -E-----ILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp -H-----HHHHHHTTEEEEEEEEECCCGG
T ss_pred -c-----hHHHHHHHHhhCCEEEEEeecc
Confidence 1 1245677788888888886544
No 488
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=89.95 E-value=0.31 Score=57.51 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=27.0
Q ss_pred CeEEEEEcChhhHHHHHHHh-hCCC---EEEEEeCCCC
Q psy13054 957 ATVGIVGLGNIGLETAKLLK-AFKV---SKILYTSRRV 990 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~-afG~---~Vi~~d~~~~ 990 (1128)
++|.|||+|.||+.+|+.|. ..++ +|++.|+...
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~ 51 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT 51 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh
Confidence 46999999999999999884 4555 6888876544
No 489
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=89.90 E-value=0.16 Score=60.28 Aligned_cols=114 Identities=18% Similarity=0.201 Sum_probs=72.6
Q ss_pred CCCeEEEEEcChh-hHHHHHHHh----hC-CCEEEEEeCCCCchhh-----h----hcC----Ccc-cChHhhhccCCEE
Q psy13054 955 KGATVGIVGLGNI-GLETAKLLK----AF-KVSKILYTSRRVKEEG-----T----ALG----AQL-VPLDTLCAESDFI 1014 (1128)
Q Consensus 955 ~gktvGIIG~G~I-G~~vA~~l~----af-G~~Vi~~d~~~~~~~~-----~----~~g----~~~-~~l~ell~~sDvV 1014 (1128)
...+|+|||.|.. |.++|..|. .+ +.+|+.||....+.+. . ..+ +.. .++++.++.||+|
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~V 106 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV 106 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEE
Confidence 3568999999998 666765553 34 6689999976643221 0 111 122 2678899999999
Q ss_pred EEecCCCcc---cc--------cccC----------------------HHHHccCCCCcEEEEcCCCcccCHHHHHHHHh
Q psy13054 1015 FVTCALTKD---TE--------QLIG----------------------RKQFSLMKPTAILVNTSRGGLLDQEALVEFLK 1061 (1128)
Q Consensus 1015 ~l~lPlt~~---T~--------~li~----------------------~~~l~~mk~ga~lIN~aRG~lVde~aL~~aL~ 1061 (1128)
++++|.... |+ +++. .+.+....|+|++||.+-.-=+-+.++.+...
T Consensus 107 Viaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~~k~~p 186 (472)
T 1u8x_X 107 MAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRP 186 (472)
T ss_dssp EECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHHHHHST
T ss_pred EEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHhCC
Confidence 999985210 11 1110 02345557999999998887665666666554
Q ss_pred cCCceEE
Q psy13054 1062 DKKIGGA 1068 (1128)
Q Consensus 1062 ~g~i~ga 1068 (1128)
..++-|.
T Consensus 187 ~~rViG~ 193 (472)
T 1u8x_X 187 NSKILNI 193 (472)
T ss_dssp TCCEEEC
T ss_pred CCCEEEe
Confidence 4466665
No 490
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.88 E-value=0.16 Score=56.74 Aligned_cols=87 Identities=16% Similarity=0.076 Sum_probs=59.6
Q ss_pred CCCeEEEEEc-ChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCcc-------cChHhhhc-----cCCEEEEecCC
Q psy13054 955 KGATVGIVGL-GNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQL-------VPLDTLCA-----ESDFIFVTCAL 1020 (1128)
Q Consensus 955 ~gktvGIIG~-G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~-------~~l~ell~-----~sDvV~l~lPl 1020 (1128)
.|+++.|+|. |.||+.+++.++..|++|++.+.+..+.+ .++.|... .++.+.+. ..|+|+.+...
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 5889999998 99999999999999999998886544333 33444321 12223222 36888877652
Q ss_pred CcccccccCHHHHccCCCCcEEEEcCC
Q psy13054 1021 TKDTEQLIGRKQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1021 t~~T~~li~~~~l~~mk~ga~lIN~aR 1047 (1128)
+ + -...++.++++..+|.++-
T Consensus 225 -~-~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 225 -E-F----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp -H-H----HHHHHTTEEEEEEEEECCC
T ss_pred -H-H----HHHHHHHHhcCCEEEEEec
Confidence 1 1 2456777888888888764
No 491
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=89.87 E-value=0.37 Score=53.82 Aligned_cols=88 Identities=22% Similarity=0.273 Sum_probs=58.2
Q ss_pred eEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCCCchhh--h---h----c--C--Ccc-cChHhhhccCCEEEEecCCCc
Q psy13054 958 TVGIVGLGNIGLETAKLLKAFKV-SKILYTSRRVKEEG--T---A----L--G--AQL-VPLDTLCAESDFIFVTCALTK 1022 (1128)
Q Consensus 958 tvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~~~~~~--~---~----~--g--~~~-~~l~ell~~sDvV~l~lPlt~ 1022 (1128)
+|+|||.|.+|..+|..+...|+ +++.+|....+... . + . . +.. .+. +.++.||+|+++.+..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~- 78 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG- 78 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC-
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC-
Confidence 58999999999999998876566 69999977654331 1 1 1 2 122 244 6789999999997743
Q ss_pred cccccc-------C----H---HHHccCCCCcEEEEcCC
Q psy13054 1023 DTEQLI-------G----R---KQFSLMKPTAILVNTSR 1047 (1128)
Q Consensus 1023 ~T~~li-------~----~---~~l~~mk~ga~lIN~aR 1047 (1128)
...++- | . +.+....|++.+|+++-
T Consensus 79 ~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 79 RKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 222321 0 0 12333458999999865
No 492
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=89.85 E-value=1.6 Score=49.03 Aligned_cols=90 Identities=12% Similarity=0.092 Sum_probs=61.2
Q ss_pred cCCCeEEE-----EEcChhhHHHHHHHhhCCCEEEEEeCCCCchhh-hhcCCcc-cChHhhhccCCEEEEecCCC--c--
Q psy13054 954 LKGATVGI-----VGLGNIGLETAKLLKAFKVSKILYTSRRVKEEG-TALGAQL-VPLDTLCAESDFIFVTCALT--K-- 1022 (1128)
Q Consensus 954 L~gktvGI-----IG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~-~~~g~~~-~~l~ell~~sDvV~l~lPlt--~-- 1022 (1128)
+. .+|++ ||=+++.+..+..+..||++|.+..|..-.+.. ...+++. .+++|.++.+|||..-.=.. .
T Consensus 167 l~-l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~ 245 (324)
T 1js1_X 167 PK-VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAYTGDN 245 (324)
T ss_dssp CE-EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECCCCCCSTTC
T ss_pred ee-EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcccCCChhhccceEEECCHHHHhCCCCEEEecCcccCCCcc
Confidence 56 78999 999999999999999999999998775543321 1124443 48999999999999733211 0
Q ss_pred -------ccccccCHHHHccCCCCcEEEEc
Q psy13054 1023 -------DTEQLIGRKQFSLMKPTAILVNT 1045 (1128)
Q Consensus 1023 -------~T~~li~~~~l~~mk~ga~lIN~ 1045 (1128)
.....++.+.++.+| +++|.-+
T Consensus 246 ~~~~~~r~~~y~vt~e~l~~a~-~ai~MHc 274 (324)
T 1js1_X 246 YGQILSTDRNWTVGDRQMAVTN-NAYFMHC 274 (324)
T ss_dssp TTCCCCCCTTSSBCHHHHTTSS-SCEEECC
T ss_pred ccchHHHhcCcccCHHHHHhcC-CcEEECC
Confidence 011334666666666 6655544
No 493
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=89.73 E-value=0.16 Score=58.99 Aligned_cols=64 Identities=17% Similarity=0.169 Sum_probs=47.1
Q ss_pred CeEEEEEcChhhHHHHHHHhhCC---CEEEEEeCCCCchh--hhhc------CCc--------ccChHhhhcc--CCEEE
Q psy13054 957 ATVGIVGLGNIGLETAKLLKAFK---VSKILYTSRRVKEE--GTAL------GAQ--------LVPLDTLCAE--SDFIF 1015 (1128)
Q Consensus 957 ktvGIIG~G~IG~~vA~~l~afG---~~Vi~~d~~~~~~~--~~~~------g~~--------~~~l~ell~~--sDvV~ 1015 (1128)
++|+|+|.|.||+.+++.|...| .+|++++++..+.. ..+. .+. ..++++++++ .|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 57999999999999999998887 48888887665543 1111 121 1246678887 89999
Q ss_pred EecCC
Q psy13054 1016 VTCAL 1020 (1128)
Q Consensus 1016 l~lPl 1020 (1128)
+++|.
T Consensus 82 n~ag~ 86 (405)
T 4ina_A 82 NIALP 86 (405)
T ss_dssp ECSCG
T ss_pred ECCCc
Confidence 99884
No 494
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.68 E-value=0.36 Score=54.66 Aligned_cols=90 Identities=21% Similarity=0.269 Sum_probs=61.0
Q ss_pred ccCCCeEEEEEcChhhHHHHHHHhhCCC-EEEEEeCCC-------------------Cchh-hh----hc--CCc--cc-
Q psy13054 953 GLKGATVGIVGLGNIGLETAKLLKAFKV-SKILYTSRR-------------------VKEE-GT----AL--GAQ--LV- 1002 (1128)
Q Consensus 953 ~L~gktvGIIG~G~IG~~vA~~l~afG~-~Vi~~d~~~-------------------~~~~-~~----~~--g~~--~~- 1002 (1128)
.+.+++|.|||+|.+|.++|+.|...|. ++.++|... .+.+ +. +. .++ ..
T Consensus 31 kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~ 110 (340)
T 3rui_A 31 IIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK 110 (340)
T ss_dssp HHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEe
Confidence 6899999999999999999999998887 555666543 1111 10 11 111 01
Q ss_pred ---------------------ChHhhhccCCEEEEecCCCcccccccCHHHHccCCCCcEEEEcC
Q psy13054 1003 ---------------------PLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1003 ---------------------~l~ell~~sDvV~l~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
.+.++++++|+|+.++- +.+|+.+++..-.+ .+.-+|+.+
T Consensus 111 ~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD-n~~tR~lin~~c~~---~~~plI~aa 171 (340)
T 3rui_A 111 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNI---ENKTVINAA 171 (340)
T ss_dssp CCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS-STGGGHHHHHHHHH---TTCEEEEEE
T ss_pred ccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC-CHHHHHHHHHHHHH---cCCcEEEee
Confidence 24578899999998765 67788888765544 344566653
No 495
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.52 E-value=0.7 Score=52.59 Aligned_cols=90 Identities=22% Similarity=0.210 Sum_probs=64.2
Q ss_pred CCCeEEEEE-cChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc------ChHhhh---ccCCEEEEecCCCcc
Q psy13054 955 KGATVGIVG-LGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV------PLDTLC---AESDFIFVTCALTKD 1023 (1128)
Q Consensus 955 ~gktvGIIG-~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~------~l~ell---~~sDvV~l~lPlt~~ 1023 (1128)
.|++|.|+| .|.||...++.++.+|++|++.+ +..+.+ .++.|+..+ ++.+.+ ...|+|+.++.....
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~ 261 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTE 261 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhh
Confidence 588999999 79999999999999999998877 334433 555665431 233322 358999988874422
Q ss_pred cccccCHHHHccCCCCcEEEEcCCCc
Q psy13054 1024 TEQLIGRKQFSLMKPTAILVNTSRGG 1049 (1128)
Q Consensus 1024 T~~li~~~~l~~mk~ga~lIN~aRG~ 1049 (1128)
+ + ...+..++++..+|.++...
T Consensus 262 ~---~-~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 262 T---W-APDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp H---H-GGGGBCSSSCCEEEESCCSH
T ss_pred h---h-HHHHHhhcCCcEEEEeCCCc
Confidence 1 1 24567889999999998644
No 496
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=89.48 E-value=0.28 Score=54.53 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=30.9
Q ss_pred CCCCEEEEEecChhhHHHHHHHhhCCCeEEEEcCCC
Q psy13054 699 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRR 734 (1128)
Q Consensus 699 l~gktvGIiG~G~IG~~va~r~~afg~~vi~y~~~~ 734 (1128)
-+.|+|||||+|.+|..+|+.+. -|.+|++||+..
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 35799999999999999999999 999999999743
No 497
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.43 E-value=0.15 Score=58.08 Aligned_cols=88 Identities=18% Similarity=0.142 Sum_probs=63.1
Q ss_pred CCCeEEEEE-cChhhHHHHHHHhhCCCEEEEEeCCCCchh-hhhcCCccc------ChHhhhc-----cCCEEEEecCCC
Q psy13054 955 KGATVGIVG-LGNIGLETAKLLKAFKVSKILYTSRRVKEE-GTALGAQLV------PLDTLCA-----ESDFIFVTCALT 1021 (1128)
Q Consensus 955 ~gktvGIIG-~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~-~~~~g~~~~------~l~ell~-----~sDvV~l~lPlt 1021 (1128)
.|++|.|+| .|.||...++.++.+|++|++.++...+.+ .++.|+..+ ++.+.++ ..|+|+.++..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 578999999 799999999999999999998886544433 445555321 3333332 36999888763
Q ss_pred cccccccCHHHHccCCCCcEEEEcCCC
Q psy13054 1022 KDTEQLIGRKQFSLMKPTAILVNTSRG 1048 (1128)
Q Consensus 1022 ~~T~~li~~~~l~~mk~ga~lIN~aRG 1048 (1128)
+ .-...++.|+++..+|.++-.
T Consensus 242 ~-----~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 242 A-----MFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp H-----HHHHHHHHEEEEEEEEECCCG
T ss_pred H-----HHHHHHHHHhcCCEEEEEeCC
Confidence 1 123567888888899888754
No 498
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=89.41 E-value=0.17 Score=54.62 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=31.0
Q ss_pred CCCCCEEEEEecChhhHHHHHHHhhCCCe-EEEEcCC
Q psy13054 698 GLKGATVGIVGLGNIGLETAKLLKAFKVS-KILYTSR 733 (1128)
Q Consensus 698 ~l~gktvGIiG~G~IG~~va~r~~afg~~-vi~y~~~ 733 (1128)
++.+.+|||||+|++|+.+|+.+...|.+ |.+||+.
T Consensus 7 ~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 7 SIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 35567899999999999999999988988 7888763
No 499
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.41 E-value=0.34 Score=52.50 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=46.7
Q ss_pred CCCeEEEEEcChhhHHHHHHHhhCCCEEEEEeCCCCchhh----hhcCC-cccChHhhhcc-CCEEEEecC
Q psy13054 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEG----TALGA-QLVPLDTLCAE-SDFIFVTCA 1019 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~vA~~l~afG~~Vi~~d~~~~~~~~----~~~g~-~~~~l~ell~~-sDvV~l~lP 1019 (1128)
.+++|.|.|.|.||+.+++.|..-|.+|++.++...+... ....+ ...+++++++. .|+|+.+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 4678999999999999999999999999999876543210 00111 11245567776 999987764
No 500
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.40 E-value=0.28 Score=55.58 Aligned_cols=86 Identities=19% Similarity=0.248 Sum_probs=56.1
Q ss_pred CCCeEEEEEcChhhHHH-HHHH-hhCCCE-EEEEeCCCC---chh-hhhcCCccc-----ChHhhhc----cCCEEEEec
Q psy13054 955 KGATVGIVGLGNIGLET-AKLL-KAFKVS-KILYTSRRV---KEE-GTALGAQLV-----PLDTLCA----ESDFIFVTC 1018 (1128)
Q Consensus 955 ~gktvGIIG~G~IG~~v-A~~l-~afG~~-Vi~~d~~~~---~~~-~~~~g~~~~-----~l~ell~----~sDvV~l~l 1018 (1128)
.+++|.|+|.|.||... ++.+ +.+|++ |++.++... +.+ +++.|+..+ ++.+ +. ..|+|+-+.
T Consensus 172 ~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~gg~Dvvid~~ 250 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVED-VPDVYEQMDFIYEAT 250 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSCCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHH-HHHhCCCCCEEEECC
Confidence 45899999999999999 9999 999998 999987665 444 555665432 2222 21 356666655
Q ss_pred CCCcccccccCHHHHccCCCCcEEEEcC
Q psy13054 1019 ALTKDTEQLIGRKQFSLMKPTAILVNTS 1046 (1128)
Q Consensus 1019 Plt~~T~~li~~~~l~~mk~ga~lIN~a 1046 (1128)
... .+ + ...++.++++..+|.++
T Consensus 251 g~~-~~---~-~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 251 GFP-KH---A-IQSVQALAPNGVGALLG 273 (357)
T ss_dssp CCH-HH---H-HHHHHHEEEEEEEEECC
T ss_pred CCh-HH---H-HHHHHHHhcCCEEEEEe
Confidence 421 11 1 23455566666666664
Done!