RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13054
(1128 letters)
>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium
methylovorum [TaxId: 84]}
Length = 191
Score = 129 bits (325), Expect = 8e-35
Identities = 55/193 (28%), Positives = 81/193 (41%), Gaps = 5/193 (2%)
Query: 909 SDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIG 968
+ AE + L + +RR EG K I + W + L T+GI G G+IG
Sbjct: 2 TVATAEIAMLLLLGSARRAGEGEKMIRTRSW--PGWEPLELVGEKLDNKTLGIYGFGSIG 59
Query: 969 LETAKLLKAFKVSKILYTSRRVKEEGTA--LGAQLVPLDTLCAESDFIFVTCALTKDTEQ 1026
AK + F + + + R A LD+L + S F + T +T
Sbjct: 60 QALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRY 119
Query: 1027 LIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQ 1086
+ + AI+VNT+RG L+D E +V L+ ++ AG DV EP +
Sbjct: 120 FFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYD 178
Query: 1087 LDNCVLTPHTSSA 1099
L N L PH SA
Sbjct: 179 LPNTFLFPHIGSA 191
Score = 79.2 bits (194), Expect = 3e-17
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Query: 281 KWRMGSKTDTNHYFGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGR 340
K G D +++ + + LD+L + S F + T +T +
Sbjct: 64 KRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNK 123
Query: 341 KQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNC 400
+ AI++NT+RG L+D E +V L+ ++ AG DV EP + L N
Sbjct: 124 ATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNT 182
Score = 47.2 bits (111), Expect = 2e-06
Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 9/116 (7%)
Query: 654 SDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIG 713
+ AE + L + +RR EG K I + W + L T+GI G G+IG
Sbjct: 2 TVATAEIAMLLLLGSARRAGEGEKMIRTRSW--PGWEPLELVGEKLDNKTLGIYGFGSIG 59
Query: 714 LETAKLLKAFKVSKILYTSRRVKEEGQLFSLVYDFCRYSIGGVTIKRLVKKTFILS 769
AK + F + + + R + + ++ L+ + S
Sbjct: 60 QALAKRAQGFDMDIDYFDTHRASSS-------DEASYQATFHDSLDSLLSVSQFFS 108
Score = 31.4 bits (70), Expect = 0.45
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 137 SDTVAEYNIGLAIAVSRRFQQRHNWI 162
+ AE + L + +RR + I
Sbjct: 2 TVATAEIAMLLLLGSARRAGEGEKMI 27
>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp.,
strain 101 [TaxId: 306]}
Length = 188
Score = 127 bits (320), Expect = 3e-34
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 5/189 (2%)
Query: 911 TVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLE 970
+VAE+ + + +++ R + + G W + + L+ VG V G IGL
Sbjct: 2 SVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCV---SHAYDLEAMHVGTVAAGRIGLA 58
Query: 971 TAKLLKAF--KVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLI 1028
+ L F + E + + D + + C L +TE +I
Sbjct: 59 VLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMI 118
Query: 1029 GRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLD 1088
+ L K A +VNT+RG L D++A+ L+ ++ G DV P+P P DHP +
Sbjct: 119 NDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMP 178
Query: 1089 NCVLTPHTS 1097
+TPH S
Sbjct: 179 YNGMTPHIS 187
Score = 92.8 bits (229), Expect = 5e-22
Identities = 28/138 (20%), Positives = 53/138 (38%)
Query: 263 SDIFEFFLGPKKNGSQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLVPLDTLCAESD 322
+ + + G + ++ + E + + D
Sbjct: 43 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCD 102
Query: 323 FIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDV 382
+ + C L +TE +I + L K A ++NT+RG L D++A+ L+ ++ G DV
Sbjct: 103 VVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDV 162
Query: 383 MIPEPLPADHPLVQLDNC 400
P+P P DHP +
Sbjct: 163 WFPQPAPKDHPWRTMPYN 180
Score = 38.8 bits (89), Expect = 0.001
Identities = 8/51 (15%), Positives = 21/51 (41%)
Query: 656 TVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGI 706
+VAE+ + + +++ R + + G W + ++ + TV
Sbjct: 2 SVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAA 52
Score = 31.9 bits (71), Expect = 0.29
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 139 TVAEYNIGLAIAVSRRFQQRHNWI 162
+VAE+ + + +++ R + H W
Sbjct: 2 SVAEHVVMMILSLVRNYLPSHEWA 25
>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 184
Score = 123 bits (310), Expect = 7e-33
Identities = 62/187 (33%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 909 SDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIG 968
+ AE+ + L +A SR+ + W TVG+VGLG IG
Sbjct: 2 IHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGK-----TVGVVGLGRIG 56
Query: 969 LETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLI 1028
A+ + AF + Y LG +L+ LD L A +DFI V T +T LI
Sbjct: 57 QLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLI 116
Query: 1029 GRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLD 1088
++ + KP I+VN +RGGL+D+ AL + + + AGLDV EP D PL +L
Sbjct: 117 DKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCT-DSPLFELA 175
Query: 1089 NCVLTPH 1095
V+TPH
Sbjct: 176 QVVVTPH 182
Score = 85.0 bits (209), Expect = 2e-19
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 275 NGSQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDT 334
+ + + + LG +L+ LD L A +DFI V T +T
Sbjct: 53 GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPET 112
Query: 335 EQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPL 394
LI ++ + KP I++N +RGGL+D+ AL + + + AGLDV EP D PL
Sbjct: 113 AGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCT-DSPL 171
Query: 395 VQLDNC 400
+L
Sbjct: 172 FELAQV 177
Score = 35.3 bits (80), Expect = 0.020
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 6/85 (7%)
Query: 654 SDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIG 713
+ AE+ + L +A SR+ + W TVG+VGLG IG
Sbjct: 2 IHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGK-----TVGVVGLGRIG 56
Query: 714 LETAKLLKAFKVSKILYTSRRVKEE 738
A+ + AF ++ V
Sbjct: 57 QLVAQRIAAFGA-YVVAYDPYVSPA 80
Score = 30.3 bits (67), Expect = 0.84
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 137 SDTVAEYNIGLAIAVSRRFQQRHNWI 162
+ AE+ + L +A SR+ +
Sbjct: 2 IHSAAEHALALLLAASRQIPAADASL 27
>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human
(Homo sapiens), Ctbp1 [TaxId: 9606]}
Length = 193
Score = 117 bits (293), Expect = 1e-30
Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 910 DTVAEYNIGLAIAVSRRFQEGRKCITSGEWA--LKQTHIIGPNIMGLKGATVGIVGLGNI 967
+ A+ + + + RR + + G ++Q + ++G T+GI+GLG +
Sbjct: 1 EETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRV 60
Query: 968 GLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVP-LDTLCAESDFIFVTCALTKDTEQ 1026
G A KAF + + Y ALG Q V L L SD + + C L +
Sbjct: 61 GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHH 120
Query: 1027 LIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLP-ADHPLV 1085
LI M+ A LVNT+RGGL+D++AL + LK+ +I GA LDV EP + PL
Sbjct: 121 LINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLK 180
Query: 1086 QLDNCVLTPHT 1096
N + TPH
Sbjct: 181 DAPNLICTPHA 191
Score = 74.7 bits (182), Expect = 9e-16
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 277 SQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQ 336
Q R + ++ + ++ L L SD + + C L +
Sbjct: 61 GQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHH 120
Query: 337 LIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLP-ADHPLV 395
LI M+ A L+NT+RGGL+D++AL + LK+ +I GA LDV EP + PL
Sbjct: 121 LINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLK 180
Query: 396 QLDNC 400
N
Sbjct: 181 DAPNL 185
Score = 43.9 bits (102), Expect = 3e-05
Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 655 DTVAEYNIGLAIAVSRRFQEGRKCITSGEWA--LKQTHIIGPNIMGLKGATVGIVGLGNI 712
+ A+ + + + RR + + G ++Q + ++G T+GI+GLG +
Sbjct: 1 EETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRV 60
Query: 713 G 713
G
Sbjct: 61 G 61
Score = 32.0 bits (71), Expect = 0.25
Identities = 4/25 (16%), Positives = 10/25 (40%)
Query: 138 DTVAEYNIGLAIAVSRRFQQRHNWI 162
+ A+ + + + RR H +
Sbjct: 1 EETADSTLCHILNLYRRATWLHQAL 25
>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 188
Score = 115 bits (289), Expect = 5e-30
Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 11/193 (5%)
Query: 909 SDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIG 968
+ +VAE IG + + R E G +GI+G G+IG
Sbjct: 2 TRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGK-----KLGIIGYGHIG 56
Query: 969 LETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLI 1028
+ L ++ + Y G A Q+ L L SD + + T+ ++
Sbjct: 57 TQLGILAESLGMYVYFYDIENKLPLGNA--TQVQHLSDLLNMSDVVSLHVPENPSTKNMM 114
Query: 1029 GRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPL----PADHPL 1084
G K+ SLMKP ++L+N SRG ++D AL + L K + GA +DV EP P PL
Sbjct: 115 GAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPL 174
Query: 1085 VQLDNCVLTPHTS 1097
+ DN +LTPH
Sbjct: 175 AEFDNVLLTPHIG 187
Score = 85.4 bits (210), Expect = 1e-19
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Query: 277 SQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQ 336
Y + E Q+ L L SD + + T+
Sbjct: 53 GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKN 112
Query: 337 LIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPL----PADH 392
++G K+ SLMKP ++LIN SRG ++D AL + L K + GA +DV EP P
Sbjct: 113 MMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTS 172
Query: 393 PLVQLDNC 400
PL + DN
Sbjct: 173 PLAEFDNV 180
Score = 34.6 bits (78), Expect = 0.038
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 654 SDTVAEYNIGLAIAVSRRFQEGRKCITSGEW 684
+ +VAE IG + + R E G
Sbjct: 2 TRSVAELVIGELLLLLRGVPEANAKAHRGVG 32
Score = 30.7 bits (68), Expect = 0.59
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 137 SDTVAEYNIGLAIAVSRRFQQRHNWIAR 164
+ +VAE IG + + R + + R
Sbjct: 2 TRSVAELVIGELLLLLRGVPEANAKAHR 29
>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase
{Lactobacillus casei [TaxId: 1582]}
Length = 199
Score = 82.6 bits (202), Expect = 2e-18
Identities = 47/203 (23%), Positives = 80/203 (39%), Gaps = 19/203 (9%)
Query: 908 SSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNI 967
S +AE+ + + + R + + + +G++ T I +G + V G
Sbjct: 1 SPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFI--GKELGQQTVGVMGTGHIGQ 58
Query: 968 GLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQL 1027
KV +G V L+ L +SD I + + +
Sbjct: 59 VAIKLFKGFGAKV----IAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHI 114
Query: 1028 IGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPL--------- 1078
I F+LMKP AI++NT+R L+D +A++ LK K+ G G+D E
Sbjct: 115 INEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHG 174
Query: 1079 ----PADHPLVQLDNCVLTPHTS 1097
P L+ + N VL+PH +
Sbjct: 175 SFKDPLWDELLGMPNVVLSPHIA 197
Score = 49.8 bits (117), Expect = 4e-07
Identities = 32/149 (21%), Positives = 51/149 (34%), Gaps = 12/149 (8%)
Query: 277 SQNPKWRMGSKTDTNHYFGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQ 336
+ + G V L+ L +SD I + +
Sbjct: 54 GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTH 113
Query: 337 LIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQ 396
+I F+LMKP AI+INT+R L+D +A++ LK K+ G G+D E +
Sbjct: 114 IINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKH 173
Query: 397 LDNCGGAGLDVMIPEPLPADHPLVQLDNC 425
P L+ + N
Sbjct: 174 ------------GSFKDPLWDELLGMPNV 190
Score = 38.7 bits (88), Expect = 0.002
Identities = 7/39 (17%), Positives = 18/39 (46%)
Query: 653 SSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHI 691
S +AE+ + + + R + + + +G++ T I
Sbjct: 1 SPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFI 39
Score = 33.3 bits (74), Expect = 0.091
Identities = 4/29 (13%), Positives = 11/29 (37%)
Query: 136 SSDTVAEYNIGLAIAVSRRFQQRHNWIAR 164
S +AE+ + + + R + +
Sbjct: 1 SPAAIAEFALTDTLYLLRNMGKVQAQLQA 29
>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus
helveticus [TaxId: 1587]}
Length = 197
Score = 82.2 bits (201), Expect = 3e-18
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 19/200 (9%)
Query: 910 DTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGL 969
+ +AE+ A + R+ + + + + T IG ++ VG+VG G+IG
Sbjct: 2 NAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPT--IGRE---VRDQVVGVVGTGHIGQ 56
Query: 970 ETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIG 1029
++++ F I E G + LD L ++D I + +I
Sbjct: 57 VFMQIMEGFGAKVI-TYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMIN 115
Query: 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEP------------ 1077
+ + MK ++VN SRG L+D +A++ L KI G +DV E
Sbjct: 116 DESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEF 175
Query: 1078 -LPADHPLVQLDNCVLTPHT 1096
L+ N ++TP T
Sbjct: 176 PDARLADLIARPNVLVTPKT 195
Score = 50.2 bits (118), Expect = 2e-07
Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 12/139 (8%)
Query: 287 KTDTNHYFGYNWFERSNGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIGRKQFSLM 346
+ Y+ F G + LD L ++D I + +I + + M
Sbjct: 63 EGFGAKVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKM 122
Query: 347 KPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHPLVQLDNCGGAGLD 406
K +++N SRG L+D +A++ L KI G +DV E + +
Sbjct: 123 KQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEF------- 175
Query: 407 VMIPEPLPADHPLVQLDNC 425
P L+ N
Sbjct: 176 -----PDARLADLIARPNV 189
Score = 35.9 bits (81), Expect = 0.013
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 655 DTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGL 714
+ +AE+ A + R+ + + + + T IG ++ VG+VG G+IG
Sbjct: 2 NAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPT--IGRE---VRDQVVGVVGTGHIGQ 56
Query: 715 ETAK 718
+
Sbjct: 57 VFMQ 60
Score = 32.5 bits (72), Expect = 0.18
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 138 DTVAEYNIGLAIAVSRRFQQRHNWIAR 164
+ +AE+ A + R+ + +AR
Sbjct: 2 NAIAEHAAIQAARILRQDKAMDEKVAR 28
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon
Pyrobaculum aerophilum [TaxId: 13773]}
Length = 181
Score = 74.0 bits (180), Expect = 1e-15
Identities = 39/189 (20%), Positives = 67/189 (35%), Gaps = 11/189 (5%)
Query: 910 DTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGL 969
D VAE+ + L +A +R + + + G++ + L V
Sbjct: 2 DAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVE-------IPLIQGEKVAVLGLGEIG 54
Query: 970 ETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTCALTKDTEQLIG 1029
+ A +++ SR KE L+ E+ L K T L+
Sbjct: 55 TRVGKILAALGAQVRGFSRTPKEGPWR---FTNSLEEALREARAAVCALPLNKHTRGLVK 111
Query: 1030 RKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMI-PEPLPADHPLVQLD 1088
+ +LM A+ VN R +LD++ ++ LK++ DV D L
Sbjct: 112 YQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLP 171
Query: 1089 NCVLTPHTS 1097
N V TP +
Sbjct: 172 NVVATPWVA 180
Score = 44.0 bits (102), Expect = 3e-05
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Query: 322 DFIFVTCALTKDTEQLIGRKQFSLMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLD 381
L K T L+ + +LM A+ +N R +LD++ ++ LK++ D
Sbjct: 94 RAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASD 153
Query: 382 VMI-PEPLPADHPLVQLDNC 400
V D L N
Sbjct: 154 VWWGRNDFAKDAEFFSLPNV 173
Score = 37.8 bits (86), Expect = 0.003
Identities = 5/26 (19%), Positives = 5/26 (19%), Gaps = 1/26 (3%)
Query: 401 GGAGLDVMI-PEPLPADHPLVQLDNC 425
DV D L N
Sbjct: 148 FIFASDVWWGRNDFAKDAEFFSLPNV 173
Score = 37.4 bits (85), Expect = 0.004
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 655 DTVAEYNIGLAIAVSRRFQEGRKCITSGEW 684
D VAE+ + L +A +R + + + G++
Sbjct: 2 DAVAEFALALLLAPYKRIIQYGEKMKRGDY 31
Score = 33.2 bits (74), Expect = 0.086
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 138 DTVAEYNIGLAIAVSRRFQQRHNWIAR 164
D VAE+ + L +A +R Q + R
Sbjct: 2 DAVAEFALALLLAPYKRIIQYGEKMKR 28
>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase
{Hyphomicrobium methylovorum [TaxId: 84]}
Length = 129
Score = 68.5 bits (167), Expect = 3e-14
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 41 RLLVPESLSKL---RFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVL 97
++L+ L + R +D+ + + ++ D IE K ALL ++K KEV+
Sbjct: 3 KILITWPLPEAAMARARESYDVIAHG-DDPKITIDEMIETAKSVDALLITLNEKCRKEVI 61
Query: 98 DRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQ 157
DR EN+K I+T+S+G DH+ LD K+RGI+VG ++ + + F
Sbjct: 62 DRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGATQAREDMAHQANDLIDALFGG 121
Query: 158 RH 159
Sbjct: 122 AD 123
Score = 54.6 bits (131), Expect = 2e-09
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 44/161 (27%)
Query: 514 KPKLFLTRDDYSRVP--AFEILGEMFDIITYPASEGQIPRDIFIEKLRGCSALLCTSRDR 571
K K+ +T +P A E +D+I + I D IE + ALL T ++
Sbjct: 1 KKKILITW----PLPEAAMARARESYDVIAHGDDPK-ITIDEMIETAKSVDALLITLNEK 55
Query: 572 VDKQVLDESGGYRCTEDFFGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITTFSVGY 631
K+V+D + +N+K I+T+S+G+
Sbjct: 56 CRKEVID-------------------------------------RIPENIKCISTYSIGF 78
Query: 632 DHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRF 672
DH++L KARGI+VG+ H ++ + + F
Sbjct: 79 DHIDLDACKARGIKVGNAPHGATQAREDMAHQANDLIDALF 119
Score = 40.7 bits (95), Expect = 1e-04
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 875 NLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRF 927
N+K I+T+S+G+DH++L KARGI+VG+ H ++ + + F
Sbjct: 67 NIKCISTYSIGFDHIDLDACKARGIKVGNAPHGATQAREDMAHQANDLIDALF 119
>d1dxya2 c.23.12.1 (A:1-100,A:300-330) D-2-hydroxyisocaproate
dehydrogenase {Lactobacillus casei [TaxId: 1582]}
Length = 131
Score = 63.9 bits (155), Expect = 1e-12
Identities = 14/113 (12%), Positives = 37/113 (32%), Gaps = 5/113 (4%)
Query: 46 ESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGE-NL 104
+ + ++ ++ + + +E KG + V ++ +
Sbjct: 14 QYFKQWAKDTGNTLEYHT----EFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMHAYGI 69
Query: 105 KVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQ 157
K + +VG D++ + +K GIR+ V + V + +
Sbjct: 70 KFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYTETAVHNMVYFSLQHLVDFLTK 122
Score = 58.9 bits (142), Expect = 6e-11
Identities = 20/165 (12%), Positives = 45/165 (27%), Gaps = 42/165 (25%)
Query: 514 KPKLFLTRDDYSRVPAFEILGEMFDI-ITYPASEGQIPRDIFIEKLRGCSALLCTSRDRV 572
K + R D + F+ + + Y + + +E +G +
Sbjct: 2 KIIAYGARVDE--IQYFKQWAKDTGNTLEY---HTEFLDENTVEWAKGFDGINSLQTTPY 56
Query: 573 DKQVLDESGGYRCTEDFFGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITTFSVGYD 632
V ++ +K +T +VG D
Sbjct: 57 AAGVFEK------------------------------------MHAYGIKFLTIRNVGTD 80
Query: 633 HLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRK 677
++++ +K GIR+ +V + V + +G
Sbjct: 81 NIDMTAMKQYGIRLSNVPAYTETAVHNMVYFSLQHLVDFLTKGET 125
Score = 52.0 bits (124), Expect = 2e-08
Identities = 12/58 (20%), Positives = 25/58 (43%)
Query: 875 NLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRK 932
+K +T +VG D++++ +K GIR+ +V + V + +G
Sbjct: 68 GIKFLTIRNVGTDNIDMTAMKQYGIRLSNVPAYTETAVHNMVYFSLQHLVDFLTKGET 125
>d1j4aa2 c.23.12.1 (A:2-103,A:301-332) D-lactate dehydrogenase
{Lactobacillus helveticus [TaxId: 1587]}
Length = 134
Score = 63.0 bits (153), Expect = 3e-12
Identities = 11/115 (9%), Positives = 34/115 (29%), Gaps = 10/115 (8%)
Query: 46 ESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDR-SGENL 104
+ + + ++ + KG ++ E L + +
Sbjct: 17 KEWEDAHKDVEVEYTDKLLTPE------TVALAKGADGVVVYQQLDYIAETLQALADNGI 70
Query: 105 KVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRH 159
++ +VG D++ + + K G ++ V S + + + +
Sbjct: 71 TKMSLRNVGVDNIDMAKAKELGFQITNVPVYS---YTTHAVRNMVVKAFDNNLEL 122
Score = 54.9 bits (132), Expect = 2e-09
Identities = 17/179 (9%), Positives = 51/179 (28%), Gaps = 50/179 (27%)
Query: 513 SKPKLFLTRDDYSRVPAFEILGEMFDIITYPASEGQIPRDIFIEKLRGCSALLCTSRDRV 572
+K + R+D P + + + ++ + + + +G ++ +
Sbjct: 1 TKIFAYAIRED--EKPFLKEWEDAHKDVEVEYTDKLLTPET-VALAKGADGVVVYQQLDY 57
Query: 573 DKQVLDESGGYRCTEDFFGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITTFSVGYD 632
+ L + ++ +VG D
Sbjct: 58 IAETLQALADNG------------------------------------ITKMSLRNVGVD 81
Query: 633 HLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQ----EGRKCITSGEWALK 687
++++ + K G ++ +V S + + + + EG+ E +K
Sbjct: 82 NIDMAKAKELGFQITNVPVYS---YTTHAVRNMVVKAFDNNLELVEGK----EAETPVK 133
Score = 44.9 bits (106), Expect = 4e-06
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 13/103 (12%)
Query: 846 ETAKLLKAFKVSKILYTSR--NKVKTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGS 903
ET L K + + + ++ +VG D++++ + K G ++ +
Sbjct: 38 ETVALAKGADGVVVYQQLDYIAETLQALADNGITKMSLRNVGVDNIDMAKAKELGFQITN 97
Query: 904 VGHISSDTVAEYNIGLAIAVSRRFQ----EGRKCITSGEWALK 942
V S + + + + EG+ E +K
Sbjct: 98 VPVYS---YTTHAVRNMVVKAFDNNLELVEGK----EAETPVK 133
>d1mx3a2 c.23.12.1 (A:27-125,A:319-352) Transcription corepressor
CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}
Length = 133
Score = 61.5 bits (149), Expect = 8e-12
Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 58 DIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHL 117
D+ T + + ++I + L L + +E L++ + L++I G D++
Sbjct: 21 DVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKF-KALRIIVRIGSGFDNI 79
Query: 118 HLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQ 157
+ GI P +S + +I + +R ++
Sbjct: 80 DIKSAGDLGI-AVCNVPAASVYSEQASIEMREEAAREIRR 118
Score = 53.8 bits (129), Expect = 4e-09
Identities = 19/155 (12%), Positives = 44/155 (28%), Gaps = 42/155 (27%)
Query: 530 FEILGEMFDIITYPASEGQIPRDIFIEKLRGCSALLCTSRDRVDKQVLDESGGYRCTEDF 589
IL ++ + A ++I + L L + ++ L++
Sbjct: 16 MPILKDVATVAFCDAQS---TQEIHEKVLNEAVGALMYHTITLTREDLEKF--------- 63
Query: 590 FGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITTFSVGYDHLELHEIKARGIRVGSV 649
K L++I G+D++++ GI V +V
Sbjct: 64 -----------------------------KALRIIVRIGSGFDNIDIKSAGDLGIAVCNV 94
Query: 650 GHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEW 684
+S + +I + +R +
Sbjct: 95 PA-ASVYSEQASIEMREEAAREIRRAITGRIPDSL 128
Score = 46.1 bits (109), Expect = 2e-06
Identities = 12/83 (14%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 859 ILYTSRNKV--KTPKRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYN 916
L + + ++ + L++I G+D++++ GI V +V +S + +
Sbjct: 47 ALMYHTITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPA-ASVYSEQAS 105
Query: 917 IGLAIAVSRRFQEGRKCITSGEW 939
I + +R +
Sbjct: 106 IEMREEAAREIRRAITGRIPDSL 128
>d1ygya2 c.23.12.1 (A:3-98,A:283-316) Phosphoglycerate dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 130
Score = 61.3 bits (148), Expect = 1e-11
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 8/125 (6%)
Query: 41 RLLVPESLSKL---RFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVL 97
+L+ + L+ + ++ RD + + ALL VD EV
Sbjct: 4 VVLIADKLAPSTVAALGDQVEVRWVD----GPDRDKLLAAVPEADALLVRSATTVDAEV- 58
Query: 98 DRSGENLKVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQ 157
+ LK++A VG D++ +D +RG+ V +S A+ G +A S R
Sbjct: 59 LAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSASTAEAQDRAGTDVAESVRLAL 118
Query: 158 RHNWI 162
++
Sbjct: 119 AGEFV 123
Score = 50.5 bits (120), Expect = 5e-08
Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 44/172 (25%)
Query: 513 SKPKLFLTRDDYSRVPAFEILGEMFDIITYPASEGQIPRDIFIEKLRGCSALLCTSRDRV 572
S P + + LG+ ++ RD + + ALL S V
Sbjct: 1 SLPVVLIADKLAPS--TVAALGDQVEVRWVDG----PDRDKLLAAVPEADALLVRSATTV 54
Query: 573 DKQVLDESGGYRCTEDFFGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITTFSVGYD 632
D +VL + LK++ VG D
Sbjct: 55 DAEVLAAA--------------------------------------PKLKIVARAGVGLD 76
Query: 633 HLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEW 684
++++ ARG+ V + +S A+ G +A S R + +
Sbjct: 77 NVDVDAATARGVLVVNAPTSASTAEAQDRAGTDVAESVRLALAGEFVPDAVN 128
Score = 42.4 bits (99), Expect = 4e-05
Identities = 15/65 (23%), Positives = 28/65 (43%)
Query: 875 NLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCI 934
LK++ VG D++++ ARG+ V + +S A+ G +A S R + +
Sbjct: 64 KLKIVARAGVGLDNVDVDAATARGVLVVNAPTSASTAEAQDRAGTDVAESVRLALAGEFV 123
Query: 935 TSGEW 939
Sbjct: 124 PDAVN 128
>d2naca2 c.23.12.1 (A:1-147,A:336-374) Formate dehydrogenase
{Pseudomonas sp., strain 101 [TaxId: 306]}
Length = 186
Score = 54.2 bits (130), Expect = 9e-09
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Query: 65 SEGRMPRDIFIEKLKGCSALLCNP--HQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEI 122
S+ P +F +L ++ P + E + ++ +NLK+ T +G DH+ L
Sbjct: 74 SDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKA-KNLKLALTAGIGSDHVDLQSA 132
Query: 123 KSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRF 155
R + V V +S T+ A
Sbjct: 133 IDRNVTVAEVTYCNSTTLTAQARYAAGTREILE 165
Score = 43.0 bits (101), Expect = 5e-05
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 619 KNLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEY--------NIGLAIAVSR 670
KNLK+ T +G DH++L R + V V + +S T+ I R
Sbjct: 112 KNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSTTLTAQARYAAGTREILECFFEGR 171
Query: 671 RFQEGRKCITSGEWA 685
++ + G A
Sbjct: 172 PIRDEYLIVQGGALA 186
Score = 42.6 bits (100), Expect = 7e-05
Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 871 KRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEY--------NIGLAIA 922
+ +NLK+ T +G DH++L R + V V + +S T+ I
Sbjct: 109 AKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSTTLTAQARYAAGTREILECFF 168
Query: 923 VSRRFQEGRKCITSGEWA 940
R ++ + G A
Sbjct: 169 EGRPIRDEYLIVQGGALA 186
>d1sc6a2 c.23.12.1 (A:7-107,A:296-326) Phosphoglycerate
dehydrogenase {Escherichia coli [TaxId: 562]}
Length = 132
Score = 47.7 bits (113), Expect = 5e-07
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Query: 45 PESLSKLRFNSRFDIDTYPVSEGRMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENL 104
++L LR +I+ + G + + E ++ + + ++V + E L
Sbjct: 15 QKALESLRAAGYTNIEFHK---GALDDEQLKESIRDAHFIGLRSRTHLTEDV-INAAEKL 70
Query: 105 KVIATFSVGHDHLHLDEIKSRGIRVGTVGPVSSDTVAEYNIGLAIAVSRRFQQRHNWIAR 164
I F++G + + LD RGI V S+ E IGL +A + + N +
Sbjct: 71 VAIGAFAIGTNQVDLDAAAKRGIPVFNAPFSSTQEAQEN-IGLEVA-GKLIKYSDNG-ST 127
Query: 165 LSSF 168
LS+
Sbjct: 128 LSAV 131
Score = 34.3 bits (78), Expect = 0.025
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 3/87 (3%)
Query: 844 GLETAKLLKAFKVSKILYTSRNKVKTPKRTE---NLKVITTFSVGYDHLELHEIKARGIR 900
L+ +L ++ + + + T L I F++G + ++L RGI
Sbjct: 35 ALDDEQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGAFAIGTNQVDLDAAAKRGIP 94
Query: 901 VGSVGHISSDTVAEYNIGLAIAVSRRF 927
V + S+ E ++
Sbjct: 95 VFNAPFSSTQEAQENIGLEVAGKLIKY 121
Score = 33.9 bits (77), Expect = 0.032
Identities = 23/160 (14%), Positives = 42/160 (26%), Gaps = 41/160 (25%)
Query: 513 SKPKLFLTRDDYSRVPAFEILGEMFDIITYPASEGQIPRDIFIEKLRGCSALLCTSRDRV 572
K K L + + A E L +G + + E +R + SR +
Sbjct: 3 DKIKFLLVEGVHQK--ALESLRAAGYTNIEF-HKGALDDEQLKESIRDAHFIGLRSRTHL 59
Query: 573 DKQVLDESGGYRCTEDFFGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITTFSVGYD 632
+ V + L I F++G +
Sbjct: 60 TEDV--------------------------------------INAAEKLVAIGAFAIGTN 81
Query: 633 HLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRF 672
++L RGI V + S+ E ++
Sbjct: 82 QVDLDAAAKRGIPVFNAPFSSTQEAQENIGLEVAGKLIKY 121
>d1qp8a2 c.23.12.1 (A:1-82,A:264-302) Putative formate dehydrogenase
{Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Length = 121
Score = 46.1 bits (109), Expect = 2e-06
Identities = 13/105 (12%), Positives = 19/105 (18%), Gaps = 33/105 (31%)
Query: 619 KNLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKC 678
LK I + G DHL I + V + + + R
Sbjct: 49 PRLKFIQVVTAGLDHLPWESIP-PHVTVAGNAGSNGYGNERVWRQMVMEAVR-------- 99
Query: 679 ITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAF 723
+ G AK
Sbjct: 100 ------------------------NLITYATGGRPRNIAKREDYI 120
Score = 45.7 bits (108), Expect = 2e-06
Identities = 13/108 (12%), Positives = 20/108 (18%), Gaps = 33/108 (30%)
Query: 871 KRTENLKVITTFSVGYDHLELHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEG 930
+ LK I + G DHL I + V + + + R
Sbjct: 46 AKMPRLKFIQVVTAGLDHLPWESIP-PHVTVAGNAGSNGYGNERVWRQMVMEAVR----- 99
Query: 931 RKCITSGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAF 978
+ G AK
Sbjct: 100 ---------------------------NLITYATGGRPRNIAKREDYI 120
Score = 39.6 bits (92), Expect = 3e-04
Identities = 14/87 (16%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Query: 68 RMPRDIFIEKLKGCSALLCNPHQKVDKEVLDRSGENLKVIATFSVGHDHLHLDEIKSRGI 127
+ + I + + ++ E L + LK I + G DHL + I
Sbjct: 16 ELRKYFKIVRGGDLGNVEAALVSRITAEELAK-MPRLKFIQVVTAGLDHLPWESIPPHVT 74
Query: 128 RVGTVGPVSSDTVAEYNIGLAIAVSRR 154
G G + + + R
Sbjct: 75 VAGNAGS-NGYGNERVWRQMVMEAVRN 100
Score = 34.6 bits (79), Expect = 0.014
Identities = 13/112 (11%), Positives = 30/112 (26%), Gaps = 19/112 (16%)
Query: 758 IKRLVKKTFILSFGGLVVTVLHVHIGDLPAESFE---------------DQVQTDGLKTL 802
+ ++K F + GG + V + + AE D + + +
Sbjct: 13 AEEELRKYFKIVRGGDLGNVEAALVSRITAEELAKMPRLKFIQVVTAGLDHLPWESIPPH 72
Query: 803 TELCYHGTINGEWALKQTHIIGPNIMGLKGATVGIVGLGNIGLETAKLLKAF 854
+ + NG + + ++ + G AK
Sbjct: 73 VTVAGNAGSNGYGNER--VWRQMVMEAVR--NLITYATGGRPRNIAKREDYI 120
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1
{Salmonella typhimurium [TaxId: 90371]}
Length = 113
Score = 40.9 bits (95), Expect = 9e-05
Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 1/98 (1%)
Query: 949 PNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGA-QLVPLDTL 1007
P L+ IVG G++ A+LL + + + L ++
Sbjct: 5 PIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGP 64
Query: 1008 CAESDFIFVTCALTKDTEQLIGRKQFSLMKPTAILVNT 1045
E+ A+ + + ++ + I N
Sbjct: 65 FDETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFCNV 102
Score = 32.0 bits (72), Expect = 0.093
Identities = 9/48 (18%), Positives = 16/48 (33%)
Query: 694 PNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGQL 741
P L+ IVG G++ A+LL + + +
Sbjct: 5 PIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVW 52
Score = 31.2 bits (70), Expect = 0.18
Identities = 9/54 (16%), Positives = 16/54 (29%)
Query: 825 PNIMGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLKV 878
P L+ IVG G++ A+LL + + +
Sbjct: 5 PIFCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGML 58
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate
ligase MurD {Escherichia coli [TaxId: 562]}
Length = 93
Score = 35.4 bits (81), Expect = 0.004
Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 17/89 (19%)
Query: 830 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLK------------ 877
+G V I+GLG GL A V+ + +R +
Sbjct: 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWL 62
Query: 878 -----VITTFSVGYDHLELHEIKARGIRV 901
++ + + H L GI +
Sbjct: 63 MAADLIVASPGIALAHPSLSAAADAGIEI 91
Score = 30.0 bits (67), Expect = 0.36
Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Query: 954 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQL-----VPLDTLC 1008
+G V I+GLG GL A V+ + +R L + D
Sbjct: 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWL 62
Query: 1009 AESDFIFVTCALTKDTEQLI 1028
+D I + + L
Sbjct: 63 MAADLIVASPGIALAHPSLS 82
Score = 30.0 bits (67), Expect = 0.37
Identities = 11/51 (21%), Positives = 17/51 (33%)
Query: 699 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGQLFSLVYDFC 749
+G V I+GLG GL A V+ + +R +
Sbjct: 3 YQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERH 53
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex
aeolicus [TaxId: 63363]}
Length = 171
Score = 36.9 bits (84), Expect = 0.005
Identities = 27/152 (17%), Positives = 51/152 (33%), Gaps = 6/152 (3%)
Query: 958 TVGIVGLGNIGLETAKLLKAFKVSKILY-TSRRVKEEGTALGAQLVPLDTLCA----ESD 1012
V IVG+G +G AK L+ +Y + A+ ++ T +
Sbjct: 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFS 62
Query: 1013 FIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDV 1072
FV + T + I +K ++ A + + L L + +GG +
Sbjct: 63 PDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAG 122
Query: 1073 M-IPEPLPADHPLVQLDNCVLTPHTSSATKAV 1103
+ L + +LTP + K +
Sbjct: 123 TEKSGVEYSLDNLYEGKKVILTPTKKTDKKRL 154
Score = 30.7 bits (68), Expect = 0.57
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 834 TVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLKVITTFSVGYDH 888
V IVG+G +G AK L+ +Y ++ + +L +I +
Sbjct: 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK 57
Score = 28.4 bits (62), Expect = 3.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 703 TVGIVGLGNIGLETAKLLKAFKVSKILY 730
V IVG+G +G AK L+ +Y
Sbjct: 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIY 30
>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase
{Rhodococcus sp., M4 [TaxId: 1831]}
Length = 201
Score = 36.3 bits (83), Expect = 0.012
Identities = 13/66 (19%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 695 NIMGLKGATVGIVGLGNIGLETAKLLKAF--KVSKILYTSRRVKEEGQLFSLVYDFCRYS 752
+ L G TV + GLG +G A L ++ + RV L
Sbjct: 21 GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVL 80
Query: 753 IGGVTI 758
+
Sbjct: 81 STPCDV 86
Score = 34.7 bits (79), Expect = 0.034
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 826 NIMGLKGATVGIVGLGNIGLETAKLL 851
+ L G TV + GLG +G A L
Sbjct: 21 GLGSLDGLTVLVQGLGAVGGSLASLA 46
Score = 34.7 bits (79), Expect = 0.034
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 950 NIMGLKGATVGIVGLGNIGLETAKLL 975
+ L G TV + GLG +G A L
Sbjct: 21 GLGSLDGLTVLVQGLGAVGGSLASLA 46
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase
{Salmonella typhimurium [TaxId: 90371]}
Length = 161
Score = 35.2 bits (80), Expect = 0.018
Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 4/131 (3%)
Query: 959 VGIVGLGNIGLETAK-LLKA-FKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFV 1016
VG +GLG +G +K LLKA + + + + A + + D I
Sbjct: 3 VGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIIT 62
Query: 1017 TCALTKDTEQLIGRKQ--FSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMI 1074
+ +++ + KP +L++ S L + + LK K + V
Sbjct: 63 MLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSG 122
Query: 1075 PEPLPADHPLV 1085
EP D L
Sbjct: 123 GEPKAIDGTLS 133
>d1j5pa4 c.2.1.3 (A:-1-108,A:220-241) Hypothetical protein TM1643
{Thermotoga maritima [TaxId: 2336]}
Length = 132
Score = 33.5 bits (76), Expect = 0.038
Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 8/88 (9%)
Query: 835 VGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLK-----VITTFSVGYDHL 889
V I+G+GNIG + +L K+ S++ + E + +
Sbjct: 5 VLIIGMGNIGKKLVELGNFEKIYAYDRISKDIPGVVRLDEFQVPSDVSTVVECASPEAVK 64
Query: 890 ELHE---IKARGIRVGSVGHISSDTVAE 914
E + S + + E
Sbjct: 65 EYSLQILKNPVNYIIISTSAFADEVFRE 92
Score = 31.9 bits (72), Expect = 0.13
Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 4/92 (4%)
Query: 704 VGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGQLFSLVY----DFCRYSIGGVTIK 759
V I+G+GNIG + +L K+ S+ + +L +K
Sbjct: 5 VLIIGMGNIGKKLVELGNFEKIYAYDRISKDIPGVVRLDEFQVPSDVSTVVECASPEAVK 64
Query: 760 RLVKKTFILSFGGLVVTVLHVHIGDLPAESFE 791
+ ++++ F
Sbjct: 65 EYSLQILKNPVNYIIISTSAFADEVFRERFFS 96
Score = 31.2 bits (70), Expect = 0.27
Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 11/112 (9%)
Query: 959 VGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVTC 1018
V I+G+GNIG + +L K+ S+ + LD SD V
Sbjct: 5 VLIIGMGNIGKKLVELGNFEKIYAYDRISKDIPGVVR--------LDEFQVPSDVSTVVE 56
Query: 1019 ALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGL 1070
+ + + + I+ S D+ F + K A +
Sbjct: 57 CASPEAVKEYSLQILKNPVNYIII---STSAFADEVFRERFFSELKNSPARV 105
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA
{Synechocystis sp. pcc 6803 [TaxId: 1148]}
Length = 165
Score = 34.0 bits (76), Expect = 0.051
Identities = 25/146 (17%), Positives = 40/146 (27%), Gaps = 1/146 (0%)
Query: 959 VGIVGLGNIGLETAKLLKAFKVSKILY-TSRRVKEEGTALGAQLVPLDTLCAESDFIFVT 1017
+G+VGLG IG A L+ I + E+ L +
Sbjct: 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIF 62
Query: 1018 CALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEP 1077
K + PTAI+ + + E + G
Sbjct: 63 LCTPIQLILPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWSGFIGGHPMAGTAAQGI 122
Query: 1078 LPADHPLVQLDNCVLTPHTSSATKAV 1103
A+ L VLTP + + +
Sbjct: 123 DGAEENLFVNAPYVLTPTEYTDPEQL 148
Score = 29.0 bits (63), Expect = 2.0
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 704 VGIVGLGNIGLETAKLLKAFKVSKILY 730
+G+VGLG IG A L+ I
Sbjct: 3 IGVVGLGLIGASLAGDLRRRGHYLIGV 29
Score = 29.0 bits (63), Expect = 2.0
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 835 VGIVGLGNIGLETAKLLKAFKVSKILY 861
+G+VGLG IG A L+ I
Sbjct: 3 IGVVGLGLIGASLAGDLRRRGHYLIGV 29
>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus
sphaericus [TaxId: 1421]}
Length = 230
Score = 34.2 bits (78), Expect = 0.055
Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 950 NIMGLKGATVGIVGLGNIGLETAKLLKAF--KVSKILYTSRRVKEEGTALGAQLVPLDTL 1007
L+G V + GLGN+ K L K+ V GA V + +
Sbjct: 33 GSDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAI 92
Query: 1008 CAESDFIFVTCAL 1020
+ IF CAL
Sbjct: 93 YGVTCDIFAPCAL 105
Score = 28.8 bits (64), Expect = 2.8
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 695 NIMGLKGATVGIVGLGNIGLETAKLL 720
L+G V + GLGN+ K L
Sbjct: 33 GSDSLEGLAVSVQGLGNVAKALCKKL 58
Score = 28.8 bits (64), Expect = 2.8
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 826 NIMGLKGATVGIVGLGNIGLETAKLL 851
L+G V + GLGN+ K L
Sbjct: 33 GSDSLEGLAVSVQGLGNVAKALCKKL 58
>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus)
[TaxId: 9913]}
Length = 293
Score = 33.9 bits (77), Expect = 0.088
Identities = 21/147 (14%), Positives = 38/147 (25%), Gaps = 14/147 (9%)
Query: 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESD 1012
G T + G GN+GL + + L F K + G L+ +
Sbjct: 33 GFGDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVGESDGSIWNPDGIDPKELEDFKLQHG 91
Query: 1013 FIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDV 1072
I ++ IL+ + L + +K K I
Sbjct: 92 TILGFPKAKIYEGSILE-------VDCDILIPAASEKQLTKSN-APRVKAKIIAEGA--- 140
Query: 1073 MIPEPLPADHPLVQLDNCVLTPHTSSA 1099
P + L+ ++
Sbjct: 141 --NGPTTPQADKIFLERNIMVIPDLYL 165
Score = 32.0 bits (72), Expect = 0.38
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 698 GLKGATVGIVGLGNIGLETAKLL 720
G T + G GN+GL + + L
Sbjct: 33 GFGDKTFAVQGFGNVGLHSMRYL 55
Score = 32.0 bits (72), Expect = 0.38
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 829 GLKGATVGIVGLGNIGLETAKLL 851
G T + G GN+GL + + L
Sbjct: 33 GFGDKTFAVQGFGNVGLHSMRYL 55
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 32.4 bits (72), Expect = 0.21
Identities = 19/144 (13%), Positives = 43/144 (29%)
Query: 700 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGQLFSLVYDFCRYSIGGVTIK 759
A + ++G G + A L S I ++ G S + F
Sbjct: 3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEI 62
Query: 760 RLVKKTFILSFGGLVVTVLHVHIGDLPAESFEDQVQTDGLKTLTELCYHGTINGEWALKQ 819
L+K + G ++ + + L E ++ GL + +
Sbjct: 63 ELMKDLGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEVLRDPKVKEALSPIKFNR 122
Query: 820 THIIGPNIMGLKGATVGIVGLGNI 843
+ + ++ + + G+I
Sbjct: 123 WDLPEVDPETMQTSEPWVFAGGDI 146
>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 156
Score = 31.8 bits (71), Expect = 0.23
Identities = 21/128 (16%), Positives = 36/128 (28%), Gaps = 3/128 (2%)
Query: 959 VGIVGLGNIGLETAK-LLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFIFVT 1017
V +GLG +G A L + F T + G++ VPL+ +
Sbjct: 3 VAFIGLGAMGYPMAGHLARRFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCL 62
Query: 1018 CALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEP 1077
+ E + + + G L E L++K + V
Sbjct: 63 PTTREVYEVAEALYPYLREGTYWVDATS--GEPEASRRLAERLREKGVTYLDAPVSGGTS 120
Query: 1078 LPADHPLV 1085
L
Sbjct: 121 GAEAGTLT 128
Score = 28.7 bits (63), Expect = 2.6
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 704 VGIVGLGNIGLETAK-LLKAFKV 725
V +GLG +G A L + F
Sbjct: 3 VAFIGLGAMGYPMAGHLARRFPT 25
Score = 28.7 bits (63), Expect = 2.6
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 1/23 (4%)
Query: 835 VGIVGLGNIGLETAK-LLKAFKV 856
V +GLG +G A L + F
Sbjct: 3 VAFIGLGAMGYPMAGHLARRFPT 25
>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum
islandicum [TaxId: 2277]}
Length = 242
Score = 31.7 bits (71), Expect = 0.41
Identities = 24/152 (15%), Positives = 46/152 (30%), Gaps = 7/152 (4%)
Query: 953 GLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESD 1012
G++G TV I G+GN+G TA L+ K++ S G + + +
Sbjct: 28 GIEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSDINGVAYRKEGLNVELIQKNKGLTG 86
Query: 1013 FIFVTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDV 1072
V TKD + + I V + ++ + + +
Sbjct: 87 PALVELFTTKDNAEFVKNPDAIFKLDVDIFVPAAIENVIRGDNA------GLVKARLVVE 140
Query: 1073 MIPEPLPADHPLVQLDNCVLTPHTSSATKAVR 1104
P + + + V+ A
Sbjct: 141 GANGPTTPEAERILYERGVVVVPDILANAGGV 172
Score = 29.4 bits (65), Expect = 2.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 698 GLKGATVGIVGLGNIGLETAKLL 720
G++G TV I G+GN+G TA L
Sbjct: 28 GIEGKTVAIQGMGNVGRWTAYWL 50
Score = 29.4 bits (65), Expect = 2.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 829 GLKGATVGIVGLGNIGLETAKLL 851
G++G TV I G+GN+G TA L
Sbjct: 28 GIEGKTVAIQGMGNVGRWTAYWL 50
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase
(acylating) {Pseudomonas sp. [TaxId: 306]}
Length = 157
Score = 30.8 bits (69), Expect = 0.53
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 704 VGIVGLGNIGLET-AKLLKAFKVSKILY-TSRRVKEEGQLF 742
V I+G GNIG + K+L+ K ++ +G
Sbjct: 7 VAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLAR 47
Score = 30.4 bits (68), Expect = 0.67
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 835 VGIVGLGNIGLET-AKLLKAFKVSKILY-TSRNKVKTPKRTENLKVITTFSVGYDHLELH 892
V I+G GNIG + K+L+ K ++ + +TT G + L
Sbjct: 7 VAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKL 66
Query: 893 EIKA 896
A
Sbjct: 67 PEFA 70
Score = 28.9 bits (64), Expect = 2.0
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 959 VGIVGLGNIGLET-AKLLKAFKVSKILY-TSRRVKEEGT 995
V I+G GNIG + K+L+ K ++ +G
Sbjct: 7 VAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGL 45
>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI)
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 182
Score = 30.2 bits (68), Expect = 0.80
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 954 LKGATVGIVGLGNIGLETAKLLK--AFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAES 1011
++G V I+G G+ G A LK V+ L + + A G ++ + T A +
Sbjct: 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAA 73
Query: 1012 DFIFVTCALTKDTEQLIGRKQFSLMKPTAILV 1043
D + + + +L + +K A L
Sbjct: 74 DVVMILTP-DEFQGRLYKEEIEPNLKKGATLA 104
>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga
maritima [TaxId: 2336]}
Length = 153
Score = 29.6 bits (65), Expect = 1.1
Identities = 11/71 (15%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Query: 959 VGIVGLGNIGLETAKLLK-AFKVSKILYTSRRVKEEGTALGAQ-LVPLDTLCAESDFIFV 1016
+ VG G + + LK +++ IL S + L+ + +FV
Sbjct: 2 LNFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFV 61
Query: 1017 TCALTKDTEQL 1027
Sbjct: 62 IVPDRYIKTVA 72
Score = 29.2 bits (64), Expect = 1.7
Identities = 8/41 (19%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Query: 835 VGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTEN 875
+ VG G + + LK + SR+ + E
Sbjct: 2 LNFVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEV 41
>d1vkna1 c.2.1.3 (A:1-144,A:308-339)
N-acetyl-gamma-glutamyl-phosphate reductase ArgC
{Thermotoga maritima [TaxId: 2336]}
Length = 176
Score = 29.8 bits (66), Expect = 1.1
Identities = 22/95 (23%), Positives = 30/95 (31%), Gaps = 2/95 (2%)
Query: 835 VGIVG-LGNIGLETAKLLKAFKVSKILY-TSRNKVKTPKRTENLKVITTFSVGYDHLELH 892
GI+G G GLE +LLK +KI Y +SR + + E
Sbjct: 4 AGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKV 63
Query: 893 EIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRF 927
+ S D V E I + F
Sbjct: 64 SKNCDVLFTALPAGASYDLVRELKGVKIIDLGADF 98
Score = 27.5 bits (60), Expect = 6.8
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 704 VGIVG-LGNIGLETAKLLKAFKVSKILYTSRR 734
GI+G G GLE +LLK +KI Y S R
Sbjct: 4 AGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35
Score = 27.5 bits (60), Expect = 6.8
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 959 VGIVG-LGNIGLETAKLLKAFKVSKILYTSRR 989
GI+G G GLE +LLK +KI Y S R
Sbjct: 4 AGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii
[TaxId: 5811]}
Length = 154
Score = 29.3 bits (65), Expect = 1.4
Identities = 9/55 (16%), Positives = 22/55 (40%)
Query: 828 MGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLKVITTF 882
+ + V ++G G IG L +++ ++ K + +L +T+
Sbjct: 3 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSV 57
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 29.8 bits (66), Expect = 1.5
Identities = 12/63 (19%), Positives = 19/63 (30%)
Query: 831 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLKVITTFSVGYDHLE 890
K + + I+G G G A + +L T K T ++
Sbjct: 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPL 63
Query: 891 LHE 893
L E
Sbjct: 64 LME 66
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain
{Archaeon Methanopyrus kandleri [TaxId: 2320]}
Length = 159
Score = 29.3 bits (65), Expect = 1.6
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 830 LKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLKVIT-TFSVGYDH 888
L TV +VG G +G AK L V +L +R + + +L F DH
Sbjct: 22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDH 81
Query: 889 LELHEI 894
L ++
Sbjct: 82 LARSDV 87
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo
sapiens), heart isoform (H chain) [TaxId: 9606]}
Length = 160
Score = 28.5 bits (63), Expect = 2.7
Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 835 VGIVGLGNIGLETAKLLKAFK-VSKILYTSRNKVKTPKRTENLKVITTFS 883
+ +VG+G +G+ A + ++ + K +L+ + F
Sbjct: 23 ITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFL 72
>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 239
Score = 29.0 bits (64), Expect = 3.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 695 NIMGLKGATVGIVGLGNIGLETAK 718
LKG T+ I G GN G AK
Sbjct: 26 GWDTLKGKTIAIQGYGNAGYYLAK 49
Score = 29.0 bits (64), Expect = 3.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 826 NIMGLKGATVGIVGLGNIGLETAK 849
LKG T+ I G GN G AK
Sbjct: 26 GWDTLKGKTIAIQGYGNAGYYLAK 49
Score = 29.0 bits (64), Expect = 3.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 950 NIMGLKGATVGIVGLGNIGLETAK 973
LKG T+ I G GN G AK
Sbjct: 26 GWDTLKGKTIAIQGYGNAGYYLAK 49
>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 172
Score = 28.3 bits (62), Expect = 3.4
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 704 VGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE 738
V +VG+G G + LK + + L V
Sbjct: 10 VVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR 44
Score = 28.3 bits (62), Expect = 3.4
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 959 VGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEE 993
V +VG+G G + LK + + L V
Sbjct: 10 VVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRR 44
Score = 28.3 bits (62), Expect = 3.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 835 VGIVGLGNIGLETAKLLKAFKVSKILY 861
V +VG+G G + LK + + L
Sbjct: 10 VVVVGVGRAGSVRLRDLKDPRSAAFLN 36
>d2daxa1 d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 140
Score = 28.2 bits (62), Expect = 3.4
Identities = 8/59 (13%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 1070 LDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128
L ++P PA P + + + +L+ + + + ++ ++ G+ I
Sbjct: 70 LACILPFKYPAVLPEITVRSVLLSRSQQTQ---LNTDLTAFLQKHCH----GDVCILNA 121
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 28.1 bits (62), Expect = 3.6
Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 2/72 (2%)
Query: 955 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFI 1014
GA V ++G G +G L ++ + E A+G + +
Sbjct: 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN--ESKAIGDAMDFNHGKVFAPKPV 62
Query: 1015 FVTCALTKDTEQ 1026
+ D
Sbjct: 63 DIWHGDYDDCRD 74
Score = 27.3 bits (60), Expect = 6.2
Identities = 7/50 (14%), Positives = 19/50 (38%)
Query: 700 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGQLFSLVYDFC 749
GA V ++G G +G L ++ + + + ++ ++
Sbjct: 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG 54
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 142
Score = 28.1 bits (62), Expect = 3.7
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 835 VGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTP 870
+ I+G G +G TA L A ++ I+ +
Sbjct: 4 ISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQ 39
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 28.2 bits (61), Expect = 4.2
Identities = 9/69 (13%), Positives = 22/69 (31%)
Query: 833 ATVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLKVITTFSVGYDHLELH 892
A V ++G G + L+ ++ ++ + P L + + L
Sbjct: 4 APVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLD 63
Query: 893 EIKARGIRV 901
+A +
Sbjct: 64 CKRAPEVEW 72
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep
(Ovis orientalis aries) [TaxId: 9940]}
Length = 176
Score = 28.0 bits (61), Expect = 4.3
Identities = 6/27 (22%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 702 ATVGIVGLGNIGLETAK-LLKA-FKVS 726
A + ++GL +G + F V
Sbjct: 3 ADIALIGLAVMGQNLILNMNDHGFVVC 29
Score = 28.0 bits (61), Expect = 4.3
Identities = 6/27 (22%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 833 ATVGIVGLGNIGLETAK-LLKA-FKVS 857
A + ++GL +G + F V
Sbjct: 3 ADIALIGLAVMGQNLILNMNDHGFVVC 29
Score = 28.0 bits (61), Expect = 4.3
Identities = 6/27 (22%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 957 ATVGIVGLGNIGLETAK-LLKA-FKVS 981
A + ++GL +G + F V
Sbjct: 3 ADIALIGLAVMGQNLILNMNDHGFVVC 29
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 152
Score = 27.9 bits (61), Expect = 4.3
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 835 VGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKR 872
VG +G G + A L++ V + T +R
Sbjct: 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER 40
Score = 27.5 bits (60), Expect = 6.4
Identities = 15/115 (13%), Positives = 24/115 (20%), Gaps = 20/115 (17%)
Query: 704 VGIVGLGNIGLETAKLLKAFKVSKILYTSRRVKEEGQLFSLVYDFCRYSIGGVTIKRLVK 763
VG +G G + A L++ V + R + V
Sbjct: 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEE---------- 52
Query: 764 KTFILSFGGLVVTVLHVHIGDLPAESFEDQVQTDGLKTLTELCYHGTINGEWALK 818
V V I + + G I+ E
Sbjct: 53 ----------DVYSCPVVISAVTPGVALGAARRAGRHVRGIYVDINNISPETVRM 97
>d2f5ga1 d.58.57.1 (A:2-131) Putative transposase SSO1474 {Archaeon
Sulfolobus solfataricus [TaxId: 2287]}
Length = 130
Score = 27.4 bits (60), Expect = 5.1
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Query: 574 KQVLDESGGYRCTEDFFGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITT--FSVGY 631
+ E E + ++ + VN S+L K + +
Sbjct: 32 AEYTKEVLKSIAEELGCEIIALEVMPDHIHLFVNCPPRYAPSYLANYFKGKSARLILKKF 91
Query: 632 DHLELHEIKARGIRVGSVGHISSDTVAEY 660
L ++ R V + G++SS+ + +Y
Sbjct: 92 PQLNKGKLWTRSYFVATAGNVSSEVIKKY 120
>d2vjva1 d.58.57.1 (A:6-130) ISHP608 transposase {Helicobacter
pylori [TaxId: 210]}
Length = 125
Score = 27.4 bits (60), Expect = 5.2
Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 4/88 (4%)
Query: 577 LDESGGYRCTEDFFGLDLDQMFRNPSKRHVNIETVLGVSFLIKNLKVITTFSVGYDHLEL 636
L E E + Q ++ +I+ GV IK K ++ + + L
Sbjct: 35 LKEIIQEVAKELRVEIIEMQTDKDHIHILADIDPSFGVMKFIKTAKGRSSRILRQEFNHL 94
Query: 637 HEIK----ARGIRVGSVGHISSDTVAEY 660
+ +VG + V +Y
Sbjct: 95 KTKLPTLWTNSCFISTVGGAPLNVVKQY 122
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and
C-terminal domains {Streptococcus mutans [TaxId: 1309]}
Length = 317
Score = 28.3 bits (62), Expect = 5.2
Identities = 5/49 (10%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 1035 LMKPTAILVNTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHP 1083
++ +++ ++ + + + +K G + + LP+D
Sbjct: 252 ILSENGLIIASTNAANMTVSQFKKQI-EKGFGKQKHTYLDLQQLPSDFA 299
Score = 28.3 bits (62), Expect = 5.9
Identities = 6/49 (12%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 345 LMKPTAILINTSRGGLLDQEALVEFLKDKKIGGAGLDVMIPEPLPADHP 393
++ ++I ++ + + + +K G + + LP+D
Sbjct: 252 ILSENGLIIASTNAANMTVSQFKKQI-EKGFGKQKHTYLDLQQLPSDFA 299
>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 234
Score = 28.2 bits (62), Expect = 5.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 697 MGLKGATVGIVGLGNIGLETAKL 719
+ K ATV + G GN+G A L
Sbjct: 27 IDPKKATVAVQGFGNVGQFAALL 49
Score = 28.2 bits (62), Expect = 5.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 828 MGLKGATVGIVGLGNIGLETAKL 850
+ K ATV + G GN+G A L
Sbjct: 27 IDPKKATVAVQGFGNVGQFAALL 49
Score = 28.2 bits (62), Expect = 5.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 952 MGLKGATVGIVGLGNIGLETAKL 974
+ K ATV + G GN+G A L
Sbjct: 27 IDPKKATVAVQGFGNVGQFAALL 49
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus
musculus), class II [TaxId: 10090]}
Length = 174
Score = 27.6 bits (60), Expect = 5.7
Identities = 25/132 (18%), Positives = 40/132 (30%), Gaps = 6/132 (4%)
Query: 831 KGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPKRTENLKVITTFSVGYDHLE 890
G+T + GLG +GL K S+I+ N K PK D +
Sbjct: 28 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELD--K 85
Query: 891 LHEIKARGIRVGSVGHISSDTVAEYNIGLAIAVSRRFQEGRKCITSGEWALKQTHIIGPN 950
+ + G V + + A+ + C G + T
Sbjct: 86 PVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGW--GSCTVVGAKVDEMTIPTVDV 143
Query: 951 IMG--LKGATVG 960
I+G + G G
Sbjct: 144 ILGRSINGTFFG 155
>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium
symbiosum [TaxId: 1512]}
Length = 255
Score = 28.1 bits (62), Expect = 6.2
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 828 MGLKGATVGIVGLGNIGLETAKLLKAFKVSKILYTSRN 865
L G TV + G GN+ AK L + + +
Sbjct: 32 DTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGPD 69
Score = 27.8 bits (61), Expect = 6.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 697 MGLKGATVGIVGLGNIGLETAKL 719
L G TV + G GN+ AK
Sbjct: 32 DTLVGKTVALAGFGNVAWGAAKK 54
Score = 27.8 bits (61), Expect = 6.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 952 MGLKGATVGIVGLGNIGLETAKL 974
L G TV + G GN+ AK
Sbjct: 32 DTLVGKTVALAGFGNVAWGAAKK 54
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 162
Score = 27.5 bits (60), Expect = 6.4
Identities = 16/113 (14%), Positives = 38/113 (33%), Gaps = 4/113 (3%)
Query: 957 ATVGIVGLGNIGLETAK-LLKA-FKVSKILYTSRRVKEEGTALGAQLVPLDTLCAESDFI 1014
+ +GLG++G A LLKA + ++ V A + +D +
Sbjct: 2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVV 61
Query: 1015 FVTCALTKDTEQLI--GRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKDKKI 1065
++ E L + + P +++ S + +++ +
Sbjct: 62 ISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL 114
Score = 27.1 bits (59), Expect = 9.1
Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 702 ATVGIVGLGNIGLETAK-LLKA 722
+ +GLG++G A LLKA
Sbjct: 2 KQIAFIGLGHMGAPMATNLLKA 23
Score = 27.1 bits (59), Expect = 9.1
Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 833 ATVGIVGLGNIGLETAK-LLKA 853
+ +GLG++G A LLKA
Sbjct: 2 KQIAFIGLGHMGAPMATNLLKA 23
>d2daya1 d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF25 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 26.8 bits (59), Expect = 6.6
Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 7/59 (11%)
Query: 1070 LDVMIPEPLPADHPLVQLDNCVLTPHTSSATKAVRDEKSSTSAENIIRGYKGEPMIYEL 1128
L + +P P + P + + N + ++ + G M+YEL
Sbjct: 56 LVLQVPAEYPHEVPQISIRNPRGLSDE-------QIHTILQVLGHVAKAGLGTAMLYEL 107
>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid
dehydrogenase (DAPDH) {Corynebacterium glutamicum
[TaxId: 1718]}
Length = 170
Score = 27.6 bits (60), Expect = 6.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 704 VGIVGLGNIGLETAKLLKAFK 724
V IVG GN+G KL+
Sbjct: 6 VAIVGYGNLGRSVEKLIAKQP 26
Score = 27.6 bits (60), Expect = 6.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 835 VGIVGLGNIGLETAKLLKAFK 855
V IVG GN+G KL+
Sbjct: 6 VAIVGYGNLGRSVEKLIAKQP 26
Score = 27.6 bits (60), Expect = 6.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 959 VGIVGLGNIGLETAKLLKAFK 979
V IVG GN+G KL+
Sbjct: 6 VAIVGYGNLGRSVEKLIAKQP 26
>d1m4ua_ g.17.1.7 (A:) Noggin {Human (Homo sapiens) [TaxId: 9606]}
Length = 206
Score = 27.6 bits (61), Expect = 7.3
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 433 FDKNFQSIDPPGAEPGSGQNLATTSKS 459
+D F + PP PG G A ++
Sbjct: 48 YDPGFMATSPPEDRPGGGGGAAGGAED 74
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase
At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 184
Score = 27.6 bits (60), Expect = 7.3
Identities = 4/25 (16%), Positives = 13/25 (52%)
Query: 704 VGIVGLGNIGLETAKLLKAFKVSKI 728
+G++G +I + ++ + + I
Sbjct: 4 IGVMGCADIARKVSRAIHLAPNATI 28
Score = 27.6 bits (60), Expect = 7.3
Identities = 4/25 (16%), Positives = 13/25 (52%)
Query: 835 VGIVGLGNIGLETAKLLKAFKVSKI 859
+G++G +I + ++ + + I
Sbjct: 4 IGVMGCADIARKVSRAIHLAPNATI 28
Score = 27.6 bits (60), Expect = 7.3
Identities = 4/25 (16%), Positives = 13/25 (52%)
Query: 959 VGIVGLGNIGLETAKLLKAFKVSKI 983
+G++G +I + ++ + + I
Sbjct: 4 IGVMGCADIARKVSRAIHLAPNATI 28
>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 168
Score = 27.3 bits (60), Expect = 8.3
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 704 VGIVGLGNIGLETAKLLKAFK 724
V ++G G +G L A K
Sbjct: 7 VAVIGAGVVGSAFLDQLLAMK 27
Score = 27.3 bits (60), Expect = 8.3
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 835 VGIVGLGNIGLETAKLLKAFK 855
V ++G G +G L A K
Sbjct: 7 VAVIGAGVVGSAFLDQLLAMK 27
Score = 27.3 bits (60), Expect = 8.3
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 959 VGIVGLGNIGLETAKLLKAFK 979
V ++G G +G L A K
Sbjct: 7 VAVIGAGVVGSAFLDQLLAMK 27
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch
{Escherichia coli [TaxId: 562]}
Length = 153
Score = 27.1 bits (59), Expect = 8.8
Identities = 15/129 (11%), Positives = 38/129 (29%), Gaps = 11/129 (8%)
Query: 961 IVGLGNIGLETAKLLKAFKVSKIL-----YTSRRVKEEGTALGAQLVPLDTLCAESDFIF 1015
+ G + + T L + + + E+ A ++P D+ +
Sbjct: 8 VCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSS----V 63
Query: 1016 VTCALTKDTEQLIGRKQFSLMKPTAILVNTSRGGLLDQEALVEFLKD-KKIGGAGLDVMI 1074
+ A ++ +L + V K+ KI D+++
Sbjct: 64 LKKAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIIL 123
Query: 1075 -PEPLPADH 1082
P+ ++
Sbjct: 124 SPQLFGSEI 132
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite
(Plasmodium falciparum) [TaxId: 5833]}
Length = 150
Score = 26.6 bits (58), Expect = 10.0
Identities = 8/37 (21%), Positives = 14/37 (37%)
Query: 835 VGIVGLGNIGLETAKLLKAFKVSKILYTSRNKVKTPK 871
+ +VG G IG A L+ + ++ K
Sbjct: 6 IVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHG 42
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.404
Gapped
Lambda K H
0.267 0.0470 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,085,121
Number of extensions: 195775
Number of successful extensions: 838
Number of sequences better than 10.0: 1
Number of HSP's gapped: 810
Number of HSP's successfully gapped: 160
Length of query: 1128
Length of database: 2,407,596
Length adjustment: 95
Effective length of query: 1033
Effective length of database: 1,103,246
Effective search space: 1139653118
Effective search space used: 1139653118
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.8 bits)