Your job contains 1 sequence.
>psy13055
MGNMLDGLRPSETAVEDEFIRRFLRGTWHNLFLSEIIIKRQHNIIRIGGIVERAIHPRKI
YFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13055
(97 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039159 - symbol:mRpS24 "mitochondrial ribosomal p... 302 7.3e-27 1
UNIPROTKB|Q3B8K3 - symbol:mrps24-b "28S ribosomal protein... 192 3.3e-15 1
UNIPROTKB|Q6NTS3 - symbol:mrps24-a "28S ribosomal protein... 192 3.3e-15 1
ZFIN|ZDB-GENE-050522-393 - symbol:mrps24 "mitochondrial r... 181 4.9e-14 1
UNIPROTKB|Q96EL2 - symbol:MRPS24 "28S ribosomal protein S... 176 1.6e-13 1
UNIPROTKB|F1ST79 - symbol:MRPS24 "Uncharacterized protein... 172 4.4e-13 1
UNIPROTKB|Q2M2T7 - symbol:MRPS24 "28S ribosomal protein S... 167 1.5e-12 1
UNIPROTKB|H9GW52 - symbol:MRPS24 "Uncharacterized protein... 167 1.5e-12 1
MGI|MGI:1928142 - symbol:Mrps24 "mitochondrial ribosomal ... 165 2.4e-12 1
RGD|1306014 - symbol:Mrps24 "mitochondrial ribosomal prot... 164 3.1e-12 1
WB|WBGene00023487 - symbol:mrps-24 species:6239 "Caenorha... 146 2.5e-10 1
UNIPROTKB|Q688C0 - symbol:F33D4.8 "28S ribosomal protein ... 146 2.5e-10 1
UNIPROTKB|Q61T16 - symbol:CBG05943 "28S ribosomal protein... 142 6.6e-10 1
>FB|FBgn0039159 [details] [associations]
symbol:mRpS24 "mitochondrial ribosomal protein S24"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] InterPro:IPR026146 EMBL:AE014297 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 GO:GO:0005763 CTD:64951
PANTHER:PTHR21244 eggNOG:NOG81573 GeneTree:ENSGT00390000011179
OMA:SWNSWNT RefSeq:NP_524476.1 UniGene:Dm.13062 MINT:MINT-777415
STRING:Q9VCC3 PaxDb:Q9VCC3 PRIDE:Q9VCC3 EnsemblMetazoa:FBtr0084577
GeneID:42870 KEGG:dme:Dmel_CG13608 FlyBase:FBgn0039159
InParanoid:Q9VCC3 OrthoDB:EOG4WM39W PhylomeDB:Q9VCC3
GenomeRNAi:42870 NextBio:831009 Bgee:Q9VCC3 Uniprot:Q9VCC3
Length = 165
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 57/94 (60%), Positives = 68/94 (72%)
Query: 4 MLDGLRPSETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKIYFL 63
M D LRPS+TA+ED FIR+F+ GTWH L SE ++ +AI PRK+YFL
Sbjct: 72 MKDALRPSQTAIEDVFIRKFVTGTWHALVCSEVIIKRQHNTIRIAALIRQAITPRKMYFL 131
Query: 64 IGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
IGYTEELLS+W+QCPV LELQTV KKDVVF+YI
Sbjct: 132 IGYTEELLSYWMQCPVTLELQTVGDKKDVVFKYI 165
>UNIPROTKB|Q3B8K3 [details] [associations]
symbol:mrps24-b "28S ribosomal protein S24-B,
mitochondrial" species:8355 "Xenopus laevis" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR026146 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 UniGene:Xl.17933 Xenbase:XB-GENE-960281
HOVERGEN:HBG093920 PANTHER:PTHR21244 EMBL:BC106281 Uniprot:Q3B8K3
Length = 170
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 45/97 (46%), Positives = 58/97 (59%)
Query: 2 GNMLDGLR-PSETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKI 60
GN LDG +E +ED FIRRF+ GT+H +E I R + +K
Sbjct: 77 GN-LDGEGGAAERTIEDVFIRRFIFGTFHGCLANEIVIKRRANLLIICAIFIRKMPTQKF 135
Query: 61 YFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
YFLIGYTE LLSF +CPVKLE+QTVE K V+++Y+
Sbjct: 136 YFLIGYTETLLSFLYKCPVKLEVQTVEEK--VIYKYL 170
>UNIPROTKB|Q6NTS3 [details] [associations]
symbol:mrps24-a "28S ribosomal protein S24-A,
mitochondrial" species:8355 "Xenopus laevis" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR026146 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 EMBL:BC068882 RefSeq:NP_001084559.1
UniGene:Xl.17933 GeneID:414509 KEGG:xla:414509 CTD:64951
Xenbase:XB-GENE-960281 HOVERGEN:HBG093920 PANTHER:PTHR21244
Uniprot:Q6NTS3
Length = 170
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 45/97 (46%), Positives = 58/97 (59%)
Query: 2 GNMLDGLR-PSETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKI 60
GN LDG +E +ED FIRRF+ GT+H +E I R + +K
Sbjct: 77 GN-LDGEGGAAERTIEDVFIRRFIFGTFHGCLANEIVIKRRANLLIICAIFIRKMPTQKF 135
Query: 61 YFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
YFLIGYTE LLSF +CPVKLE+QTVE K V+++Y+
Sbjct: 136 YFLIGYTETLLSFLYKCPVKLEVQTVEEK--VIYKYL 170
>ZFIN|ZDB-GENE-050522-393 [details] [associations]
symbol:mrps24 "mitochondrial ribosomal protein S24"
species:7955 "Danio rerio" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0005840
"ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR026146 ZFIN:ZDB-GENE-050522-393
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 CTD:64951
HOVERGEN:HBG093920 PANTHER:PTHR21244 eggNOG:NOG81573
GeneTree:ENSGT00390000011179 HOGENOM:HOG000252979 OMA:SWNSWNT
OrthoDB:EOG4SF978 EMBL:BC095767 IPI:IPI00499967
RefSeq:NP_001018518.1 UniGene:Dr.84430 STRING:Q502C1
Ensembl:ENSDART00000062348 GeneID:553711 KEGG:dre:553711
NextBio:20880441 Bgee:Q502C1 Uniprot:Q502C1
Length = 163
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 37/87 (42%), Positives = 54/87 (62%)
Query: 11 SETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKIYFLIGYTEEL 70
+E +ED FIRRF+ GT+H+ E ++ + + P K YFL+GYTEEL
Sbjct: 79 AERVLEDVFIRRFIFGTFHSCLADELVIKRRGNVLIICAVMIQKLLPSKFYFLLGYTEEL 138
Query: 71 LSFWLQCPVKLELQTVESKKDVVFRYI 97
LS + +CPVK+ELQ V+ K VV++Y+
Sbjct: 139 LSHFYKCPVKMELQLVDEK--VVYKYL 163
>UNIPROTKB|Q96EL2 [details] [associations]
symbol:MRPS24 "28S ribosomal protein S24, mitochondrial"
species:9606 "Homo sapiens" [GO:0005763 "mitochondrial small
ribosomal subunit" evidence=NAS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS]
InterPro:IPR026146 GO:GO:0006412 EMBL:CH471073 GO:GO:0005762
GO:GO:0003735 EMBL:CH236951 GO:GO:0005763 CTD:64951
HOVERGEN:HBG093920 PANTHER:PTHR21244 eggNOG:NOG81573
HOGENOM:HOG000252979 OMA:SWNSWNT OrthoDB:EOG4SF978 EMBL:AF161453
EMBL:BC012167 EMBL:BC054865 EMBL:AB061207 IPI:IPI00101258
RefSeq:NP_114403.1 UniGene:Hs.284286 ProteinModelPortal:Q96EL2
STRING:Q96EL2 PhosphoSite:Q96EL2 PaxDb:Q96EL2 PRIDE:Q96EL2
DNASU:64951 Ensembl:ENST00000317534 GeneID:64951 KEGG:hsa:64951
UCSC:uc003tit.1 GeneCards:GC07M043872 HGNC:HGNC:14510 HPA:HPA020983
MIM:611986 neXtProt:NX_Q96EL2 PharmGKB:PA31012 InParanoid:Q96EL2
PhylomeDB:Q96EL2 ChiTaRS:MRPS24 GenomeRNAi:64951 NextBio:67130
ArrayExpress:Q96EL2 Bgee:Q96EL2 CleanEx:HS_MRPS24
Genevestigator:Q96EL2 Uniprot:Q96EL2
Length = 167
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 40/97 (41%), Positives = 57/97 (58%)
Query: 2 GNMLDGL-RPSETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKI 60
GN LDG +E VED F+R+F+ GT+ + +V R + P K
Sbjct: 74 GN-LDGEDHAAERTVEDVFLRKFMWGTFPGCLADQLVLKRRGNQLEICAVVLRQLSPHKY 132
Query: 61 YFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
YFL+GY+E LLS++ +CPV+L LQTV SK VV++Y+
Sbjct: 133 YFLVGYSETLLSYFYKCPVRLHLQTVPSK--VVYKYL 167
>UNIPROTKB|F1ST79 [details] [associations]
symbol:MRPS24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR026146 GO:GO:0005739 PANTHER:PTHR21244
GeneTree:ENSGT00390000011179 OMA:SWNSWNT EMBL:FP236704
RefSeq:XP_003134910.1 UniGene:Ssc.5981 Ensembl:ENSSSCT00000018205
GeneID:100524778 KEGG:ssc:100524778 Uniprot:F1ST79
Length = 167
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 2 GNMLDGL-RPSETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKI 60
GN LDG +E VED F+R+F+ GT+ + +V R + P K
Sbjct: 74 GN-LDGEDHAAERTVEDVFLRKFMLGTFPGCLADQLVLKRRANQLEICALVLRQLPPHKF 132
Query: 61 YFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
YFL+GY+E LLS + +CPV L LQTV SK VV++YI
Sbjct: 133 YFLVGYSETLLSHFYKCPVHLHLQTVPSK--VVYKYI 167
>UNIPROTKB|Q2M2T7 [details] [associations]
symbol:MRPS24 "28S ribosomal protein S24, mitochondrial"
species:9913 "Bos taurus" [GO:0006412 "translation" evidence=IDA]
[GO:0003735 "structural constituent of ribosome" evidence=IDA]
[GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA]
InterPro:IPR026146 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
CTD:64951 HOVERGEN:HBG093920 PANTHER:PTHR21244 EMBL:BC111632
IPI:IPI00692058 PIR:C59326 RefSeq:NP_001040066.1 UniGene:Bt.23526
STRING:Q2M2T7 Ensembl:ENSBTAT00000009724 GeneID:617466
KEGG:bta:617466 eggNOG:NOG81573 GeneTree:ENSGT00390000011179
HOGENOM:HOG000252979 InParanoid:Q2M2T7 OMA:SWNSWNT
OrthoDB:EOG4SF978 NextBio:20900683 Uniprot:Q2M2T7
Length = 167
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 40/97 (41%), Positives = 55/97 (56%)
Query: 2 GNMLDGL-RPSETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKI 60
GN LDG +E VED F+R+F+ GT+ + +V R + K
Sbjct: 74 GN-LDGEDHAAERTVEDVFLRKFMLGTFPGCLADQLILKRRANQVEICALVLRQLPAHKF 132
Query: 61 YFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
YFL+GY+E LLS + +CPV+L LQTV SK VV++YI
Sbjct: 133 YFLVGYSETLLSHFYKCPVRLHLQTVPSK--VVYKYI 167
>UNIPROTKB|H9GW52 [details] [associations]
symbol:MRPS24 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR026146 GO:GO:0005739 PANTHER:PTHR21244
GeneTree:ENSGT00390000011179 Ensembl:ENSCAFT00000004560 OMA:XNLDGED
Uniprot:H9GW52
Length = 97
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 40/97 (41%), Positives = 55/97 (56%)
Query: 2 GNMLDGLR-PSETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKI 60
GN LDG +E VED F+R+F+ GT+ + +V R + K
Sbjct: 4 GN-LDGEEHAAERTVEDVFLRKFMLGTFPGCLADQLILKRRANQLQICALVLRQLPAHKF 62
Query: 61 YFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
YFL+GY+E LLS + +CPV+L LQTV SK VV++YI
Sbjct: 63 YFLVGYSETLLSHFYKCPVRLHLQTVPSK--VVYKYI 97
>MGI|MGI:1928142 [details] [associations]
symbol:Mrps24 "mitochondrial ribosomal protein S24"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR026146 MGI:MGI:1928142
GO:GO:0006412 GO:GO:0005762 GO:GO:0003735 EMBL:AL627069
GO:GO:0005763 CTD:64951 HOVERGEN:HBG093920 PANTHER:PTHR21244
eggNOG:NOG81573 GeneTree:ENSGT00390000011179 HOGENOM:HOG000252979
OMA:SWNSWNT OrthoDB:EOG4SF978 ChiTaRS:MRPS24 EMBL:AK003117
EMBL:AK007338 EMBL:AK010590 EMBL:AK014099 EMBL:BC029262
IPI:IPI00133179 RefSeq:NP_080356.1 UniGene:Mm.490269 STRING:Q9CQV5
PhosphoSite:Q9CQV5 PaxDb:Q9CQV5 PRIDE:Q9CQV5
Ensembl:ENSMUST00000154330 GeneID:64660 KEGG:mmu:64660
UCSC:uc007hwt.1 InParanoid:Q9CQV5 NextBio:320155 Bgee:Q9CQV5
CleanEx:MM_MRPS24 Genevestigator:Q9CQV5 Uniprot:Q9CQV5
Length = 167
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/97 (40%), Positives = 55/97 (56%)
Query: 2 GNMLDGL-RPSETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKI 60
GN LDG +E +ED F+R+F+ GT+ + +V R + K
Sbjct: 74 GN-LDGEDHAAERTLEDVFLRKFMMGTFPGCLADQIVLKRRANQVDICALVLRQLPAHKF 132
Query: 61 YFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
YFL+GY+E LLS + +CPV+L LQTV SK VV++YI
Sbjct: 133 YFLVGYSETLLSHFYKCPVRLHLQTVPSK--VVYKYI 167
>RGD|1306014 [details] [associations]
symbol:Mrps24 "mitochondrial ribosomal protein S24"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR026146 RGD:1306014 GO:GO:0005739 GO:GO:0005840
CTD:64951 HOVERGEN:HBG093920 PANTHER:PTHR21244 eggNOG:NOG81573
GeneTree:ENSGT00390000011179 HOGENOM:HOG000252979 OMA:SWNSWNT
OrthoDB:EOG4SF978 EMBL:BC157807 IPI:IPI00400759
RefSeq:NP_001071127.1 UniGene:Rn.1914 STRING:A9UMV2
Ensembl:ENSRNOT00000016207 GeneID:498406 KEGG:rno:498406
UCSC:RGD:1306014 NextBio:699697 Genevestigator:A9UMV2
Uniprot:A9UMV2
Length = 167
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 39/97 (40%), Positives = 55/97 (56%)
Query: 2 GNMLDGL-RPSETAVEDEFIRRFLRGTWHNLFLSEXXXXXXXXXXXXGGIVERAIHPRKI 60
GN LDG +E +ED F+R+F+ GT+ + +V R + K
Sbjct: 74 GN-LDGEDHAAERTLEDVFLRKFMLGTFPGCLADQIVLKRRANQVDICALVLRQLPAHKF 132
Query: 61 YFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
YFL+GY+E LLS + +CPV+L LQTV SK VV++YI
Sbjct: 133 YFLVGYSETLLSHFYKCPVRLHLQTVPSK--VVYKYI 167
>WB|WBGene00023487 [details] [associations]
symbol:mrps-24 species:6239 "Caenorhabditis elegans"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR026146 GO:GO:0009792 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 EMBL:FO080445 PANTHER:PTHR21244 eggNOG:NOG81573
GeneTree:ENSGT00390000011179 HOGENOM:HOG000252979 OMA:SWNSWNT
RefSeq:NP_001023176.1 EnsemblMetazoa:F33D4.8 GeneID:259579
KEGG:cel:CELE_F33D4.8 UCSC:F33D4.8 CTD:259579 WormBase:F33D4.8
InParanoid:Q688C0 NextBio:952154 Uniprot:Q688C0
Length = 164
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/100 (38%), Positives = 57/100 (57%)
Query: 5 LDGLRPSETAV--EDEFIRRFLRGTW-HNLFLS--EXXXXXXXXXXXXGGIVE--RAIHP 57
L+ R S+ V +DE +RRF+RG + NL +S E G ++ R +
Sbjct: 65 LEEFRQSQPLVVAQDEVVRRFIRGFFPQNLVVSGNEIVIKRRGNVLIVAGFLQYSRRLDI 124
Query: 58 RKIYFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
R+IY++ G+ EE LS L+ PVKLE+ VES++DV + YI
Sbjct: 125 RRIYWMFGFAEEFLSILLKQPVKLEMAFVESEEDVAYNYI 164
>UNIPROTKB|Q688C0 [details] [associations]
symbol:F33D4.8 "28S ribosomal protein S24, mitochondrial"
species:6239 "Caenorhabditis elegans" [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] InterPro:IPR026146 GO:GO:0009792 GO:GO:0006412
GO:GO:0005762 GO:GO:0003735 EMBL:FO080445 PANTHER:PTHR21244
eggNOG:NOG81573 GeneTree:ENSGT00390000011179 HOGENOM:HOG000252979
OMA:SWNSWNT RefSeq:NP_001023176.1 EnsemblMetazoa:F33D4.8
GeneID:259579 KEGG:cel:CELE_F33D4.8 UCSC:F33D4.8 CTD:259579
WormBase:F33D4.8 InParanoid:Q688C0 NextBio:952154 Uniprot:Q688C0
Length = 164
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 38/100 (38%), Positives = 57/100 (57%)
Query: 5 LDGLRPSETAV--EDEFIRRFLRGTW-HNLFLS--EXXXXXXXXXXXXGGIVE--RAIHP 57
L+ R S+ V +DE +RRF+RG + NL +S E G ++ R +
Sbjct: 65 LEEFRQSQPLVVAQDEVVRRFIRGFFPQNLVVSGNEIVIKRRGNVLIVAGFLQYSRRLDI 124
Query: 58 RKIYFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
R+IY++ G+ EE LS L+ PVKLE+ VES++DV + YI
Sbjct: 125 RRIYWMFGFAEEFLSILLKQPVKLEMAFVESEEDVAYNYI 164
>UNIPROTKB|Q61T16 [details] [associations]
symbol:CBG05943 "28S ribosomal protein S24, mitochondrial"
species:6238 "Caenorhabditis briggsae" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR026146 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 EMBL:HE600909 PANTHER:PTHR21244 eggNOG:NOG81573
HOGENOM:HOG000252979 OMA:SWNSWNT RefSeq:XP_002633224.1
EnsemblMetazoa:CBG05943 GeneID:8575221 KEGG:cbr:CBG05943
CTD:8575221 WormBase:CBG05943 Uniprot:Q61T16
Length = 166
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 38/100 (38%), Positives = 56/100 (56%)
Query: 5 LDGLRPSETAV--EDEFIRRFLRGTW-HNLFLS--EXXXXXXXXXXXXGGIVE--RAIHP 57
L+ R S+ V +DE +RRF+RG + NL +S E G ++ R +
Sbjct: 67 LEEFRQSQPLVVAQDEVVRRFIRGFFPQNLVVSGNEIVIKRRGNVLIVAGFLQYSRRLDI 126
Query: 58 RKIYFLIGYTEELLSFWLQCPVKLELQTVESKKDVVFRYI 97
R+IY++ G+ EE LS L+ PVKLEL VES++ V + YI
Sbjct: 127 RRIYWMFGFAEEFLSILLKQPVKLELSFVESEETVAYNYI 166
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.144 0.445 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 97 85 0.00091 102 3 11 22 0.40 29
29 0.46 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 561 (60 KB)
Total size of DFA: 110 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:07
No. of threads or processors used: 24
Search cpu time: 7.68u 0.06s 7.74t Elapsed: 00:00:09
Total cpu time: 7.68u 0.06s 7.74t Elapsed: 00:00:16
Start: Thu Aug 15 14:17:46 2013 End: Thu Aug 15 14:18:02 2013