Your job contains 1 sequence.
>psy13058
MESQPSLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIAD
EMLLHQNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNII
TQLALALADLALQMSAWEKPVVYIIEKLSHKGSILALLEVLTVLPEEVNVLKLGKNRREE
FEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSWSSGSLHDAATDCVSALHR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13058
(238 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-708 - symbol:tnpo3 "transportin 3" s... 325 9.6e-31 2
UNIPROTKB|F1SMQ0 - symbol:TNPO3 "Uncharacterized protein"... 323 9.7e-31 2
UNIPROTKB|A5D7C4 - symbol:TNPO3 "TNPO3 protein" species:9... 323 9.7e-31 2
UNIPROTKB|Q9Y5L0 - symbol:TNPO3 "Transportin-3" species:9... 323 9.7e-31 2
MGI|MGI:1196412 - symbol:Tnpo3 "transportin 3" species:10... 323 9.7e-31 2
RGD|1308938 - symbol:Tnpo3 "transportin 3" species:10116 ... 323 1.0e-30 2
UNIPROTKB|C9J7E5 - symbol:TNPO3 "Uncharacterized protein"... 323 1.1e-30 2
FB|FBgn0031456 - symbol:Trn-SR "Transportin-Serine/Argini... 312 4.6e-30 2
UNIPROTKB|H9L0A9 - symbol:H9L0A9 "Uncharacterized protein... 257 8.5e-24 2
UNIPROTKB|E9PFH4 - symbol:TNPO3 "Transportin-3" species:9... 194 4.3e-17 2
POMBASE|SPBC11G11.07 - symbol:mtr10 "karyopherin, nuclear... 165 5.3e-11 1
CGD|CAL0001884 - symbol:MTR10 species:5476 "Candida albic... 146 7.4e-08 1
TAIR|locus:2154159 - symbol:MOS14 "AT5G62600" species:370... 129 1.7e-07 2
SGD|S000005686 - symbol:MTR10 "Nuclear import receptor" s... 141 3.8e-07 1
UNIPROTKB|F1N8G5 - symbol:IPO13 "Importin-13" species:903... 119 1.4e-05 2
UNIPROTKB|A7YWD2 - symbol:IPO13 "Importin-13" species:991... 124 5.3e-05 1
UNIPROTKB|I3LVG1 - symbol:LOC100624339 "Uncharacterized p... 122 9.4e-05 1
UNIPROTKB|F1M8G7 - symbol:Ipo13 "Importin-13" species:101... 121 0.00012 1
ZFIN|ZDB-GENE-070706-1 - symbol:ipo13 "importin 13" speci... 114 0.00023 2
UNIPROTKB|O94829 - symbol:IPO13 "Importin-13" species:960... 108 0.00040 2
MGI|MGI:2385205 - symbol:Ipo13 "importin 13" species:1009... 108 0.00040 2
RGD|620071 - symbol:Ipo13 "importin 13" species:10116 "Ra... 114 0.00083 1
>ZFIN|ZDB-GENE-040426-708 [details] [associations]
symbol:tnpo3 "transportin 3" species:7955 "Danio
rerio" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR001494
InterPro:IPR016024 SMART:SM00913 ZFIN:ZDB-GENE-040426-708
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0005643 EMBL:BX465210 InterPro:IPR013598
Pfam:PF08389 GeneTree:ENSGT00530000063347 KO:K15436 CTD:23534
HOGENOM:HOG000273876 HOVERGEN:HBG057505 OMA:RENNPTL EMBL:BC045332
IPI:IPI00504575 RefSeq:NP_957381.1 UniGene:Dr.2195 STRING:Q7ZW13
Ensembl:ENSDART00000067161 GeneID:394062 KEGG:dre:394062
InParanoid:Q7ZW13 NextBio:20815020 Uniprot:Q7ZW13
Length = 923
Score = 325 (119.5 bits), Expect = 9.6e-31, Sum P(2) = 9.6e-31
Identities = 79/224 (35%), Positives = 117/224 (52%)
Query: 1 MES-QPSLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIA 59
ME +P+L VY V LY +P+ KE+AS WL +LQ+S+YAW+I+D++L+
Sbjct: 1 MEGGKPTLPLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQ-------- 52
Query: 60 DEMLLHQNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNI 119
L Q+ +E+ YF+AQTM+ K+Q +F+ELP +SH +LRDSL+ H+ D S I
Sbjct: 53 ----LKQD---IESCYFAAQTMKMKIQTSFYELPPDSHTALRDSLLSHIQNLKDLS-PII 104
Query: 120 ITQXXXXXXXXXXQMSAWEKPVVYIIEKLSHKGSIXXXXXXXXXXX---XXXXXXKLGKN 176
+TQ QM++W+ V +IEK S+ S ++G N
Sbjct: 105 VTQLALAIADLALQMASWKGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGAN 164
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
RR E E+L V+ L TC G + + KV +C SW
Sbjct: 165 RRTEIIEDLAYYSTTVVTLLVTCAEKSGHDEKMLIKVFRCLGSW 208
Score = 51 (23.0 bits), Expect = 9.6e-31, Sum P(2) = 9.6e-31
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 221 SSGSLHDAATDCV-SALH 237
+S +LH+AA+DCV SAL+
Sbjct: 237 TSTNLHEAASDCVCSALY 254
>UNIPROTKB|F1SMQ0 [details] [associations]
symbol:TNPO3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035048 "splicing factor protein import into nucleus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR016024 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 GO:GO:0035048 OMA:RENNPTL
EMBL:CU928618 EMBL:CU638846 Ensembl:ENSSSCT00000018042
Uniprot:F1SMQ0
Length = 921
Score = 323 (118.8 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 76/224 (33%), Positives = 119/224 (53%)
Query: 1 ME-SQPSLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIA 59
ME ++P+L VY V LY +P+ + KE+AS WL +LQ+S++AW+I+D++L+
Sbjct: 1 MEGTKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-------- 52
Query: 60 DEMLLHQNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNI 119
+ Q+ +E+ YF+AQTM+ K+Q +F+ELP++SH SLRDSL+ H+ D S I
Sbjct: 53 ----IRQD---VESCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPV-I 104
Query: 120 ITQXXXXXXXXXXQMSAWEKPVVYIIEKLSHKGS---IXXXXXXXXXXXXXXXXXKLGKN 176
+TQ QM +W+ V ++EK S+ + ++G N
Sbjct: 105 VTQLALAIADLALQMPSWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGAN 164
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
RR E E+L V+ L TC G + + KV +C SW
Sbjct: 165 RRTEIIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRCLGSW 208
Score = 53 (23.7 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 221 SSGSLHDAATDCV-SALH 237
+S +LH+AA+DCV SAL+
Sbjct: 237 TSSNLHEAASDCVCSALY 254
>UNIPROTKB|A5D7C4 [details] [associations]
symbol:TNPO3 "TNPO3 protein" species:9913 "Bos taurus"
[GO:0035048 "splicing factor protein import into nucleus"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR016024 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172
GeneTree:ENSGT00530000063347 KO:K15436 CTD:23534
HOGENOM:HOG000273876 HOVERGEN:HBG057505 OrthoDB:EOG4QRH3B
GO:GO:0035048 OMA:RENNPTL EMBL:DAAA02011499 EMBL:DAAA02011500
EMBL:BC140505 IPI:IPI00709094 RefSeq:NP_001091559.1
UniGene:Bt.76380 STRING:A5D7C4 Ensembl:ENSBTAT00000006573
GeneID:537183 KEGG:bta:537183 InParanoid:A5D7C4 NextBio:20877081
Uniprot:A5D7C4
Length = 923
Score = 323 (118.8 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 76/224 (33%), Positives = 119/224 (53%)
Query: 1 ME-SQPSLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIA 59
ME ++P+L VY V LY +P+ + KE+AS WL +LQ+S++AW+I+D++L+
Sbjct: 1 MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-------- 52
Query: 60 DEMLLHQNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNI 119
+ Q+ +E+ YF+AQTM+ K+Q +F+ELP++SH SLRDSL+ H+ D S I
Sbjct: 53 ----IRQD---VESCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPV-I 104
Query: 120 ITQXXXXXXXXXXQMSAWEKPVVYIIEKLSHKGS---IXXXXXXXXXXXXXXXXXKLGKN 176
+TQ QM +W+ V ++EK S+ + ++G N
Sbjct: 105 VTQLALAIADLALQMPSWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGAN 164
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
RR E E+L V+ L TC G + + KV +C SW
Sbjct: 165 RRTEIIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRCLGSW 208
Score = 53 (23.7 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 221 SSGSLHDAATDCV-SALH 237
+S +LH+AA+DCV SAL+
Sbjct: 237 TSSNLHEAASDCVCSALY 254
>UNIPROTKB|Q9Y5L0 [details] [associations]
symbol:TNPO3 "Transportin-3" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0035048 "splicing factor protein import into
nucleus" evidence=IDA] [GO:0004872 "receptor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR016024
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0004872 EMBL:CH236950 EMBL:AC025594
InterPro:IPR013598 Pfam:PF08389 Orphanet:186 eggNOG:NOG237172
KO:K15436 EMBL:AF145029 EMBL:AJ133769 EMBL:AK225999 EMBL:AC018639
EMBL:BC009221 IPI:IPI00395694 IPI:IPI00455127 IPI:IPI00944945
IPI:IPI01009481 RefSeq:NP_001177957.2 RefSeq:NP_036602.1
UniGene:Hs.193613 ProteinModelPortal:Q9Y5L0 SMR:Q9Y5L0
IntAct:Q9Y5L0 MINT:MINT-1194798 STRING:Q9Y5L0 PhosphoSite:Q9Y5L0
DMDM:166215035 PaxDb:Q9Y5L0 PRIDE:Q9Y5L0 DNASU:23534
Ensembl:ENST00000265388 Ensembl:ENST00000471234 GeneID:23534
KEGG:hsa:23534 UCSC:uc003vol.2 CTD:23534 GeneCards:GC07M128594
HGNC:HGNC:17103 HPA:HPA039555 MIM:610032 neXtProt:NX_Q9Y5L0
PharmGKB:PA134888159 HOGENOM:HOG000273876 HOVERGEN:HBG057505
OrthoDB:EOG4QRH3B GenomeRNAi:23534 NextBio:46030
ArrayExpress:Q9Y5L0 Bgee:Q9Y5L0 CleanEx:HS_TNPO3
Genevestigator:Q9Y5L0 GermOnline:ENSG00000064419 GO:GO:0035048
Uniprot:Q9Y5L0
Length = 923
Score = 323 (118.8 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 76/224 (33%), Positives = 119/224 (53%)
Query: 1 ME-SQPSLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIA 59
ME ++P+L VY V LY +P+ + KE+AS WL +LQ+S++AW+I+D++L+
Sbjct: 1 MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-------- 52
Query: 60 DEMLLHQNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNI 119
+ Q+ +E+ YF+AQTM+ K+Q +F+ELP++SH SLRDSL+ H+ D S I
Sbjct: 53 ----IRQD---VESCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPV-I 104
Query: 120 ITQXXXXXXXXXXQMSAWEKPVVYIIEKLSHKGS---IXXXXXXXXXXXXXXXXXKLGKN 176
+TQ QM +W+ V ++EK S+ + ++G N
Sbjct: 105 VTQLALAIADLALQMPSWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGAN 164
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
RR E E+L V+ L TC G + + KV +C SW
Sbjct: 165 RRTEIIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRCLGSW 208
Score = 53 (23.7 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 221 SSGSLHDAATDCV-SALH 237
+S +LH+AA+DCV SAL+
Sbjct: 237 TSSNLHEAASDCVCSALY 254
>MGI|MGI:1196412 [details] [associations]
symbol:Tnpo3 "transportin 3" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0035048 "splicing factor protein import into
nucleus" evidence=ISO] InterPro:IPR016024 MGI:MGI:1196412
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 UniGene:Mm.304472 InterPro:IPR013598
Pfam:PF08389 eggNOG:NOG237172 GeneTree:ENSGT00530000063347
KO:K15436 CTD:23534 HOGENOM:HOG000273876 HOVERGEN:HBG057505
OrthoDB:EOG4QRH3B GO:GO:0035048 EMBL:AK049446 EMBL:AK077714
EMBL:BC052756 EMBL:BC064646 IPI:IPI00464114 IPI:IPI00464115
IPI:IPI00761835 RefSeq:NP_796270.2 UniGene:Mm.276381
UniGene:Mm.352219 UniGene:Mm.424508 UniGene:Mm.429470
UniGene:Mm.439108 ProteinModelPortal:Q6P2B1 SMR:Q6P2B1
STRING:Q6P2B1 PhosphoSite:Q6P2B1 PaxDb:Q6P2B1 PRIDE:Q6P2B1
Ensembl:ENSMUST00000012679 Ensembl:ENSMUST00000115251 GeneID:320938
KEGG:mmu:320938 UCSC:uc009bdy.1 UCSC:uc009bea.1 OMA:RENNPTL
ChiTaRS:TNPO3 NextBio:397720 Bgee:Q6P2B1 CleanEx:MM_TNPO3
Genevestigator:Q6P2B1 GermOnline:ENSMUSG00000012535 Uniprot:Q6P2B1
Length = 923
Score = 323 (118.8 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 76/224 (33%), Positives = 119/224 (53%)
Query: 1 ME-SQPSLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIA 59
ME ++P+L VY V LY +P+ + KE+AS WL +LQ+S++AW+I+D++L+
Sbjct: 1 MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-------- 52
Query: 60 DEMLLHQNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNI 119
+ Q+ +E+ YF+AQTM+ K+Q +F+ELP++SH SLRDSL+ H+ D S I
Sbjct: 53 ----IRQD---VESCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPV-I 104
Query: 120 ITQXXXXXXXXXXQMSAWEKPVVYIIEKLSHKGS---IXXXXXXXXXXXXXXXXXKLGKN 176
+TQ QM +W+ V ++EK S+ + ++G N
Sbjct: 105 VTQLALAIADLALQMPSWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGAN 164
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
RR E E+L V+ L TC G + + KV +C SW
Sbjct: 165 RRTEIIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRCLGSW 208
Score = 53 (23.7 bits), Expect = 9.7e-31, Sum P(2) = 9.7e-31
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 221 SSGSLHDAATDCV-SALH 237
+S +LH+AA+DCV SAL+
Sbjct: 237 TSSNLHEAASDCVCSALY 254
>RGD|1308938 [details] [associations]
symbol:Tnpo3 "transportin 3" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0035048 "splicing
factor protein import into nucleus" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR016024
RGD:1308938 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 OrthoDB:EOG4QRH3B GO:GO:0035048
EMBL:AC095491 IPI:IPI00565121 Ensembl:ENSRNOT00000043902
UCSC:RGD:1308938 ArrayExpress:D4AAM0 Uniprot:D4AAM0
Length = 929
Score = 323 (118.8 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 76/224 (33%), Positives = 119/224 (53%)
Query: 1 ME-SQPSLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIA 59
ME ++P+L VY V LY +P+ + KE+AS WL +LQ+S++AW+I+D++L+
Sbjct: 1 MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-------- 52
Query: 60 DEMLLHQNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNI 119
+ Q+ +E+ YF+AQTM+ K+Q +F+ELP++SH SLRDSL+ H+ D S I
Sbjct: 53 ----IRQD---VESCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPV-I 104
Query: 120 ITQXXXXXXXXXXQMSAWEKPVVYIIEKLSHKGS---IXXXXXXXXXXXXXXXXXKLGKN 176
+TQ QM +W+ V ++EK S+ + ++G N
Sbjct: 105 VTQLALAIADLALQMPSWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGAN 164
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
RR E E+L V+ L TC G + + KV +C SW
Sbjct: 165 RRTEIIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRCLGSW 208
Score = 53 (23.7 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 221 SSGSLHDAATDCV-SALH 237
+S +LH+AA+DCV SAL+
Sbjct: 237 TSSNLHEAASDCVCSALY 254
>UNIPROTKB|C9J7E5 [details] [associations]
symbol:TNPO3 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0006810 "transport" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR016024 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC025594
InterPro:IPR013598 Pfam:PF08389 EMBL:AC018639 HGNC:HGNC:17103
HOGENOM:HOG000273876 OMA:RENNPTL IPI:IPI00872398 SMR:C9J7E5
STRING:C9J7E5 Ensembl:ENST00000393245 Ensembl:ENST00000471166
UCSC:uc010lly.2 Uniprot:C9J7E5
Length = 957
Score = 323 (118.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 76/224 (33%), Positives = 119/224 (53%)
Query: 1 ME-SQPSLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIA 59
ME ++P+L VY V LY +P+ + KE+AS WL +LQ+S++AW+I+D++L+
Sbjct: 1 MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQ-------- 52
Query: 60 DEMLLHQNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNI 119
+ Q+ +E+ YF+AQTM+ K+Q +F+ELP++SH SLRDSL+ H+ D S I
Sbjct: 53 ----IRQD---VESCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPV-I 104
Query: 120 ITQXXXXXXXXXXQMSAWEKPVVYIIEKLSHKGS---IXXXXXXXXXXXXXXXXXKLGKN 176
+TQ QM +W+ V ++EK S+ + ++G N
Sbjct: 105 VTQLALAIADLALQMPSWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGAN 164
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
RR E E+L V+ L TC G + + KV +C SW
Sbjct: 165 RRTEIIEDLAFYSSTVVSLLMTCVEKAGTDEKMLMKVFRCLGSW 208
Score = 53 (23.7 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 221 SSGSLHDAATDCV-SALH 237
+S +LH+AA+DCV SAL+
Sbjct: 237 TSSNLHEAASDCVCSALY 254
>FB|FBgn0031456 [details] [associations]
symbol:Trn-SR "Transportin-Serine/Arginine rich" species:7227
"Drosophila melanogaster" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0006606 "protein import into nucleus"
evidence=ISS] [GO:0035048 "splicing factor protein import into
nucleus" evidence=IDA;IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0048024
"regulation of mRNA splicing, via spliceosome" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 SMART:SM00913
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AE014134 GO:GO:0022008 GO:GO:0008565
GO:GO:0005643 GO:GO:0048024 InterPro:IPR013598 Pfam:PF08389
eggNOG:NOG237172 GeneTree:ENSGT00530000063347 KO:K15436
GO:GO:0035048 OMA:RENNPTL EMBL:AY095186 RefSeq:NP_608708.2
UniGene:Dm.11639 SMR:Q9VQG0 IntAct:Q9VQG0 MINT:MINT-301134
STRING:Q9VQG0 EnsemblMetazoa:FBtr0077715 GeneID:33465
KEGG:dme:Dmel_CG2848 UCSC:CG2848-RA CTD:33465 FlyBase:FBgn0031456
InParanoid:Q9VQG0 OrthoDB:EOG43TX9D GenomeRNAi:33465 NextBio:783700
Uniprot:Q9VQG0
Length = 932
Score = 312 (114.9 bits), Expect = 4.6e-30, Sum P(2) = 4.6e-30
Identities = 77/219 (35%), Positives = 114/219 (52%)
Query: 6 SLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLH 65
S+D VY + L+ N E+EKA++WL QKSIY+W IADE LLH
Sbjct: 5 SVDVVYQAISALFQGNNPKEQEKANKWLQDFQKSIYSWTIADE--------------LLH 50
Query: 66 QNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXX 125
Q L A YF+AQTMR K+QN+F ELP +H SLRDSLI H+ + ++ + I+TQ
Sbjct: 51 QKR-DLHANYFAAQTMRNKIQNSFSELPPHTHESLRDSLITHIGQIDEQTDNVIVTQLSL 109
Query: 126 XXXXXXXQMSAWEKPVVYIIEKLS-HKGSI--XXXXXXXXXXXXXXXXXKLGKNRREEFE 182
M++W +P+ ++ L+ H+ +I +LG NRREE
Sbjct: 110 AVADLALLMASWREPINDLLVTLAPHQCAIWPLLEVLKVLPEEIDSRYLRLGANRREEVH 169
Query: 183 EELKAAGPIVIEFLKTC-QANCGDNVSLQTKVLKCFTSW 220
++L A+ V++FL C Q D + L+ +++W
Sbjct: 170 KQLDASAECVLKFLCMCLQREDLDQQRVWNAALRTYSAW 208
Score = 58 (25.5 bits), Expect = 4.6e-30, Sum P(2) = 4.6e-30
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 221 SSGSLHDAATDCVSAL 236
+SG LHD AT+CV AL
Sbjct: 237 TSGKLHDNATECVCAL 252
>UNIPROTKB|H9L0A9 [details] [associations]
symbol:H9L0A9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0035048
"splicing factor protein import into nucleus" evidence=IEA]
InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 OMA:RENNPTL EMBL:AADN02040997
EMBL:AADN02040998 Ensembl:ENSGALT00000022432 Uniprot:H9L0A9
Length = 855
Score = 257 (95.5 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 56/171 (32%), Positives = 90/171 (52%)
Query: 53 IYAWKIADEMLLHQNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTN 112
++AW+I+D++L Q +E+ YF+AQTM+ K+Q +F+ELP++SH SLRDSL+ H+
Sbjct: 5 VHAWEISDQLL--QIRQDVESCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLSHIQNLK 62
Query: 113 DTSGKNIITQXXXXXXXXXXQMSAWEKPVVYIIEKLSHKGS---IXXXXXXXXXXXXXXX 169
D S I+TQ QM++W+ V ++EK S+ +
Sbjct: 63 DLSPV-IVTQLALAIADLALQMASWKGCVQTLVEKDSNDVTSLPFLLEILTVLPEEVHSR 121
Query: 170 XXKLGKNRREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
++G NRR E E+L V+ L TC G++ + K+ +C SW
Sbjct: 122 SLRIGANRRTEIIEDLAYYSSTVVSLLMTCVEKAGNDEKMLIKIFRCLGSW 172
Score = 53 (23.7 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 221 SSGSLHDAATDCV-SALH 237
+S +LH+AA+DCV SAL+
Sbjct: 201 TSSNLHEAASDCVCSALY 218
>UNIPROTKB|E9PFH4 [details] [associations]
symbol:TNPO3 "Transportin-3" species:9606 "Homo sapiens"
[GO:0006810 "transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR016024 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AC025594 InterPro:IPR013598 Pfam:PF08389
EMBL:AC018639 HGNC:HGNC:17103 IPI:IPI00946283
ProteinModelPortal:E9PFH4 SMR:E9PFH4 Ensembl:ENST00000482320
ArrayExpress:E9PFH4 Bgee:E9PFH4 Uniprot:E9PFH4
Length = 857
Score = 194 (73.4 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 45/143 (31%), Positives = 67/143 (46%)
Query: 81 MRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXXXXXXXXXQMSAWEKP 140
M+ K+Q +F+ELP++SH SLRDSL+ H+ D S I+TQ QM +W+
Sbjct: 1 MKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPV-IVTQLALAIADLALQMPSWKGC 59
Query: 141 VVYIIEKLSHKGS---IXXXXXXXXXXXXXXXXXKLGKNRREEFEEELKAAGPIVIEFLK 197
V ++EK S+ + ++G NRR E E+L V+ L
Sbjct: 60 VQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTVVSLLM 119
Query: 198 TCQANCGDNVSLQTKVLKCFTSW 220
TC G + + KV +C SW
Sbjct: 120 TCVEKAGTDEKMLMKVFRCLGSW 142
Score = 53 (23.7 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 221 SSGSLHDAATDCV-SALH 237
+S +LH+AA+DCV SAL+
Sbjct: 171 TSSNLHEAASDCVCSALY 188
>POMBASE|SPBC11G11.07 [details] [associations]
symbol:mtr10 "karyopherin, nuclear import receptor
Mtr10 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006404 "RNA import into nucleus"
evidence=ISO] [GO:0006606 "protein import into nucleus"
evidence=ISO] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810
PROSITE:PS50166 SMART:SM00913 PomBase:SPBC11G11.07 GO:GO:0005829
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
EMBL:CU329671 GO:GO:0005643 GO:GO:0006606 InterPro:IPR013598
Pfam:PF08389 eggNOG:NOG237172 HOGENOM:HOG000181190 KO:K15436
OMA:TEWTSKH OrthoDB:EOG4BZR9R GO:GO:0006404 PIR:T39765
RefSeq:NP_595725.2 ProteinModelPortal:Q9USZ2 STRING:Q9USZ2
EnsemblFungi:SPBC11G11.07.1 GeneID:2539916 KEGG:spo:SPBC11G11.07
NextBio:20801059 Uniprot:Q9USZ2
Length = 955
Score = 165 (63.1 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 7 LDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLHQ 66
++T+ + + TLY N ++ +K +A+ +L + QKS AW+I +L+Q
Sbjct: 1 METLLSALATLYANTDREQKLQANNYLEEFQKSPAAWQICFS--------------ILNQ 46
Query: 67 NELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXXX 126
++ +EA F+AQT+RQK+ F +LP E+H+ R+SL++ D S + ++
Sbjct: 47 DDSSIEAKLFAAQTLRQKIVYDFHQLPKETHIEFRNSLLQLFLAAKD-SPRPLLVSLAVC 105
Query: 127 XXXXXXQMSAWEKPVVYIIEKLSHK 151
M+ W + + + S K
Sbjct: 106 MAAIALHMTEWHNVIADVFQACSSK 130
>CGD|CAL0001884 [details] [associations]
symbol:MTR10 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008139 "nuclear localization sequence binding"
evidence=IEA] [GO:0006609 "mRNA-binding (hnRNP) protein import into
nucleus" evidence=IEA] [GO:0006404 "RNA import into nucleus"
evidence=IEA] [GO:0051031 "tRNA transport" evidence=IEA]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 CGD:CAL0001884 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0005643
InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172 EMBL:AACQ01000210
KO:K15436 RefSeq:XP_711171.1 ProteinModelPortal:Q59N69
STRING:Q59N69 GeneID:3647235 KEGG:cal:CaO19.1119 Uniprot:Q59N69
Length = 959
Score = 146 (56.5 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 55/225 (24%), Positives = 96/225 (42%)
Query: 3 SQPSLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEM 62
S ++ + + + T+Y N + EK A+ +L + QKS AW I ++L DE
Sbjct: 2 SSDTIAQLNSALVTMYSNVPQQEKMTATHYLEEFQKSQQAWDIVHQILN--------DE- 52
Query: 63 LLHQNELGLEAVYFSAQTMRQKV-QNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIIT 121
+ ++ F+AQT+R K+ + + P + +L++SL+E L + + K I T
Sbjct: 53 --NNGNSNIQLKIFAAQTLRSKIIYDLSAQFPESNFENLKNSLLEILSKYTAPNQKLIRT 110
Query: 122 QXXXXXXXXXXQMSAWEKPVVYIIEKLSHKGSIXXXXXXXXXXXXXXXXXKLGKNRRE-E 180
Q Q +W + II KLS ++ N + E
Sbjct: 111 QLSIALSHFALQYLSWRNALSEIINKLSSSETLLPVLLEFLKILPEELSDVKKTNLTDSE 170
Query: 181 FEE---ELKAAG-PIVIEFLKTC-QANCGDNVSLQTKVLKCFTSW 220
F + EL + V+ LK ++N +N S+ + +L C SW
Sbjct: 171 FNQRTQELISDNVEQVMMILKNLTESNTNNNASMNSSILDCLNSW 215
>TAIR|locus:2154159 [details] [associations]
symbol:MOS14 "AT5G62600" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=IDA] [GO:0006606 "protein
import into nucleus" evidence=IMP] [GO:0043484 "regulation of RNA
splicing" evidence=IMP] InterPro:IPR001494 InterPro:IPR016024
SMART:SM00913 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005643 GO:GO:0006606 GO:GO:0043484 InterPro:IPR013598
Pfam:PF08389 eggNOG:NOG237172 KO:K15436 OMA:TEWTSKH EMBL:BT002408
EMBL:BT010552 EMBL:AK229829 EMBL:AK230415 IPI:IPI00518097
RefSeq:NP_201066.2 UniGene:At.29041 ProteinModelPortal:Q8GUL2
PaxDb:Q8GUL2 PRIDE:Q8GUL2 EnsemblPlants:AT5G62600.1 GeneID:836381
KEGG:ath:AT5G62600 TAIR:At5g62600 HOGENOM:HOG000005921
InParanoid:Q8GUL2 PhylomeDB:Q8GUL2 ProtClustDB:CLSN2681119
ArrayExpress:Q8GUL2 Genevestigator:Q8GUL2 Uniprot:Q8GUL2
Length = 958
Score = 129 (50.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 8 DTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLHQN 67
+ V ++ LY +P+ T + A +WL Q ++ AW++AD LLH +
Sbjct: 5 NAVKEALNALYHHPDDTVRVHADRWLQNFQGTLDAWQVADN--------------LLHDS 50
Query: 68 ELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSL 104
LE + F +QT+R KVQ F ELP + LR SL
Sbjct: 51 SSNLETLIFCSQTLRSKVQRDFEELPPGAFQKLRQSL 87
Score = 57 (25.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 176 NRREEFEEELKAAGPIVIEFLKTCQANCGDNVS-LQTKVLKCFTSW 220
+RR +FE+EL + + L C +S L+ +VL+ F SW
Sbjct: 165 DRRRQFEKELTSQMEAALSILSACL-----KISELKEQVLEAFASW 205
>SGD|S000005686 [details] [associations]
symbol:MTR10 "Nuclear import receptor" species:4932
"Saccharomyces cerevisiae" [GO:0051031 "tRNA transport"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0006606 "protein import into nucleus" evidence=ISS;IMP;IPI]
[GO:0008139 "nuclear localization sequence binding" evidence=IPI]
[GO:0006609 "mRNA-binding (hnRNP) protein import into nucleus"
evidence=ISS;IMP;IPI] [GO:0006403 "RNA localization" evidence=IMP]
[GO:0006404 "RNA import into nucleus" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0005643 "nuclear
pore" evidence=IEA] InterPro:IPR001494 InterPro:IPR016024
SMART:SM00913 SGD:S000005686 GO:GO:0016021 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 EMBL:BK006948 GO:GO:0008565
GO:GO:0005643 GO:GO:0008139 EMBL:U55020 InterPro:IPR013598
Pfam:PF08389 GO:GO:0006609 eggNOG:NOG237172
GeneTree:ENSGT00530000063347 EMBL:Z75068 PIR:S67048
RefSeq:NP_014803.1 ProteinModelPortal:Q99189 DIP:DIP-2358N
IntAct:Q99189 MINT:MINT-619417 STRING:Q99189 PaxDb:Q99189
PeptideAtlas:Q99189 EnsemblFungi:YOR160W GeneID:854331
KEGG:sce:YOR160W CYGD:YOR160w HOGENOM:HOG000181190 KO:K15436
OMA:TEWTSKH OrthoDB:EOG4BZR9R NextBio:976387 Genevestigator:Q99189
GermOnline:YOR160W GO:GO:0006404 GO:GO:0051031 Uniprot:Q99189
Length = 972
Score = 141 (54.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 60/212 (28%), Positives = 90/212 (42%)
Query: 22 NKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLHQNELGLEAVYFSAQTM 81
++ +K KA Q+L Q Q+S AW I +E+L D N L LE F+AQT+
Sbjct: 21 SQDDKNKALQFLEQFQRSTVAWSICNEILSK------EDPT----NAL-LELNIFAAQTL 69
Query: 82 RQKVQNAFFELPSESHV-SLRDSLIEHLCRTNDTSGKNIITQXXXXXXXXXXQMSAWEKP 140
R KV +L E+++ +DSL+ L N K IITQ Q W+ P
Sbjct: 70 RNKVTYDLSQL--ENNLPQFKDSLLTLLLSHNQ---KLIITQLNVALARLAIQFLEWQNP 124
Query: 141 VVYIIEKLSHKGSIXXXXXXX----XXXXXXXXXXKLGKNRREEFEEELKAAGPIVIEFL 196
+ II L+ SI ++ N R E + V++FL
Sbjct: 125 IFEIISLLNSSPSILLNFLRILPEETLDIASTSLTEVEFNSR--IHELIDPIAEDVLKFL 182
Query: 197 KTC-------QANCGDNVSLQTKVLKCFTSWS 221
+C N ++SL+ ++L+C SWS
Sbjct: 183 VSCIDLLQNTDGNSSSSISLE-QILRCLNSWS 213
>UNIPROTKB|F1N8G5 [details] [associations]
symbol:IPO13 "Importin-13" species:9031 "Gallus gallus"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] InterPro:IPR001494 InterPro:IPR016024
Pfam:PF03810 PROSITE:PS50166 SMART:SM00913 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0005643
GO:GO:0006606 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 IPI:IPI00595353 EMBL:AADN02012716
Ensembl:ENSGALT00000016399 ArrayExpress:F1N8G5 Uniprot:F1N8G5
Length = 955
Score = 119 (46.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 37/147 (25%), Positives = 66/147 (44%)
Query: 9 TVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLHQNE 68
+++ +H LY +PN K A +WL Q Q S AW H ++W +LL+ ++
Sbjct: 17 SLFQALHQLYYDPNIENKNLAQKWLMQAQVSPQAW--------H-FSW-----LLLNMDK 62
Query: 69 LGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXXXXX 128
+ E YF A + K+ + ++P++ + SL+ L H+ R S K ++T+
Sbjct: 63 VP-EIQYFGASALHIKISRYWNDIPADQYESLKSQLFTHITRFAGGS-KIVLTRLCVALA 120
Query: 129 XXXXQM--SAWEKPVVYIIEKLSHKGS 153
M AW V ++ + S
Sbjct: 121 SLALSMMPEAWPCAVADMVRMFQAEDS 147
Score = 51 (23.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 209 LQTKVLKCFTSW 220
++ KVLKCF+SW
Sbjct: 210 IKQKVLKCFSSW 221
>UNIPROTKB|A7YWD2 [details] [associations]
symbol:IPO13 "Importin-13" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0008565 GO:GO:0005643
GO:GO:0006606 InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172
EMBL:BC134514 IPI:IPI00685387 RefSeq:NP_001098860.1 UniGene:Bt.7175
STRING:A7YWD2 Ensembl:ENSBTAT00000025142 GeneID:523399
KEGG:bta:523399 CTD:9670 GeneTree:ENSGT00530000063347
HOGENOM:HOG000049153 HOVERGEN:HBG052141 InParanoid:A7YWD2
OMA:VDGRARC OrthoDB:EOG4K6G3G NextBio:20873732 Uniprot:A7YWD2
Length = 963
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 50/224 (22%), Positives = 86/224 (38%)
Query: 6 SLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLH 65
+++ V +H LY +PN K A +WL Q Q S AW H ++W+ LL
Sbjct: 22 TVENVEKALHQLYYDPNIENKNLAQKWLMQAQASPQAW--------H-FSWQ-----LLQ 67
Query: 66 QNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXX 125
+++ E YF A + K+ + ++P++ + SL+ L + R S K ++T+
Sbjct: 68 PDKVP-EIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGS-KIVLTRLCV 125
Query: 126 XXXXXXXQM--SAWEKPVVYIIE-------KLSHKGSIXXXXXXXXXXXXXXXXXKLGKN 176
M AW V ++ + +G +L +
Sbjct: 126 ALASLALSMMPDAWPCAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQY 185
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
R+ L V L+ ++ KVLKCF+SW
Sbjct: 186 RKSLVRTSLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSW 229
>UNIPROTKB|I3LVG1 [details] [associations]
symbol:LOC100624339 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0005643 InterPro:IPR013598
Pfam:PF08389 GeneTree:ENSGT00530000063347 OMA:VDGRARC EMBL:FP475997
RefSeq:XP_003356535.1 Ensembl:ENSSSCT00000025206 GeneID:100624339
KEGG:ssc:100624339 Uniprot:I3LVG1
Length = 963
Score = 122 (48.0 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 50/224 (22%), Positives = 86/224 (38%)
Query: 6 SLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLH 65
+++ V +H LY +PN K A +WL Q Q S AW H ++W+ LL
Sbjct: 22 TVENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAW--------H-FSWQ-----LLQ 67
Query: 66 QNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXX 125
+++ E YF A + K+ + ++P++ + SL+ L + R S K ++T+
Sbjct: 68 PDKVP-EIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGS-KIVLTRLCV 125
Query: 126 XXXXXXXQM--SAWEKPVVYIIE-------KLSHKGSIXXXXXXXXXXXXXXXXXKLGKN 176
M AW V ++ + +G +L +
Sbjct: 126 ALASLALSMMPDAWPCAVADMVRLFQAEDSPVDGQGRCLALLELLTVLPEEFQTSRLPQY 185
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
R+ L V L+ ++ KVLKCF+SW
Sbjct: 186 RKSLVRASLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSW 229
>UNIPROTKB|F1M8G7 [details] [associations]
symbol:Ipo13 "Importin-13" species:10116 "Rattus
norvegicus" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] InterPro:IPR001494
InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166 SMART:SM00913
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005643 GO:GO:0006606 InterPro:IPR013598 Pfam:PF08389
GeneTree:ENSGT00530000063347 IPI:IPI00203944
Ensembl:ENSRNOT00000026844 ArrayExpress:F1M8G7 Uniprot:F1M8G7
Length = 964
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 50/224 (22%), Positives = 86/224 (38%)
Query: 6 SLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLH 65
+++ V +H LY +PN K A +WL Q Q S AW H ++W+ LL
Sbjct: 22 TVENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAW--------H-FSWQ-----LLQ 67
Query: 66 QNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXX 125
+++ E YF A + K+ + ++P++ + SL+ L + R S K ++T+
Sbjct: 68 PDKVP-EIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGS-KIVLTRLCV 125
Query: 126 XXXXXXXQM--SAWEKPVVYIIE-------KLSHKGSIXXXXXXXXXXXXXXXXXKLGKN 176
M AW V ++ + +G +L +
Sbjct: 126 ALASLALSMMPDAWPCAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQY 185
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
R+ L V L+ ++ KVLKCF+SW
Sbjct: 186 RKGLVRASLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSW 229
>ZFIN|ZDB-GENE-070706-1 [details] [associations]
symbol:ipo13 "importin 13" species:7955 "Danio rerio"
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR001494
InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166 SMART:SM00913
ZFIN:ZDB-GENE-070706-1 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0005643
InterPro:IPR013598 Pfam:PF08389 GeneTree:ENSGT00530000063347
EMBL:CABZ01059108 EMBL:CABZ01059109 EMBL:CABZ01059110
EMBL:CABZ01059111 EMBL:CABZ01059112 EMBL:CABZ01059113
EMBL:CABZ01059114 EMBL:CABZ01059115 EMBL:CABZ01059116
IPI:IPI00798712 Ensembl:ENSDART00000085624 Uniprot:F1Q9F5
Length = 946
Score = 114 (45.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 36/141 (25%), Positives = 59/141 (41%)
Query: 14 VHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLHQNELGLEA 73
+H LY +PN K A +WL Q Q S AW+ + W +LL +++ E
Sbjct: 10 LHQLYYDPNIENKNLAQKWLMQAQVSPQAWQ---------FCW-----VLLRPDKVP-EI 54
Query: 74 VYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXXXXXXXXXQ 133
YF A + K+ + ++P+E + SL+ L + R S K ++T+
Sbjct: 55 QYFGASALHTKISRYWSDIPAEQYDSLKSQLFSQIARFASGS-KIVLTRLCVALASLALN 113
Query: 134 M--SAWEKPVVYIIEKLSHKG 152
M AW V ++ G
Sbjct: 114 MMPEAWPGAVSEMVRMFQEDG 134
Score = 45 (20.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 205 DNVSL-QTKVLKCFTSW 220
D+ SL + +VLKC +SW
Sbjct: 193 DSPSLVKARVLKCLSSW 209
>UNIPROTKB|O94829 [details] [associations]
symbol:IPO13 "Importin-13" species:9606 "Homo sapiens"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 EMBL:CH471059 GO:GO:0008565
GO:GO:0005643 GO:GO:0006606 EMBL:AL357079 PDB:2X19 PDBsum:2X19
InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172 CTD:9670
HOVERGEN:HBG052141 OMA:VDGRARC OrthoDB:EOG4K6G3G EMBL:AF267987
EMBL:AB018267 EMBL:BC008194 EMBL:AL117501 EMBL:AK023441
IPI:IPI00005651 PIR:T17276 RefSeq:NP_055467.3 UniGene:Hs.158497
PDB:2XWU PDBsum:2XWU ProteinModelPortal:O94829 SMR:O94829
IntAct:O94829 MINT:MINT-1465082 STRING:O94829 PhosphoSite:O94829
PaxDb:O94829 PRIDE:O94829 Ensembl:ENST00000372343 GeneID:9670
KEGG:hsa:9670 UCSC:uc001ckx.3 GeneCards:GC01P044412 HGNC:HGNC:16853
MIM:610411 neXtProt:NX_O94829 PharmGKB:PA134981096
InParanoid:O94829 PhylomeDB:O94829 ChiTaRS:IPO13
EvolutionaryTrace:O94829 GenomeRNAi:9670 NextBio:36311
ArrayExpress:O94829 Bgee:O94829 CleanEx:HS_IPO13
Genevestigator:O94829 GermOnline:ENSG00000117408 Uniprot:O94829
Length = 963
Score = 108 (43.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 35/134 (26%), Positives = 60/134 (44%)
Query: 6 SLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLH 65
+++ V +H LY +PN K A +WL Q Q S AW H ++W+ LL
Sbjct: 22 TVENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAW--------H-FSWQ-----LLQ 67
Query: 66 QNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXX 125
+++ E YF A + K+ + ++P++ + SL+ L + R S K ++T+
Sbjct: 68 PDKVP-EIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGS-KIVLTRLCV 125
Query: 126 XXXXXXXQM--SAW 137
M AW
Sbjct: 126 ALASLALSMMPDAW 139
Score = 50 (22.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 209 LQTKVLKCFTSW 220
++ KVLKCF+SW
Sbjct: 218 VRQKVLKCFSSW 229
>MGI|MGI:2385205 [details] [associations]
symbol:Ipo13 "importin 13" species:10090 "Mus musculus"
[GO:0002147 "glucocorticoid receptor import into nucleus"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006606 "protein import
into nucleus" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0035259
"glucocorticoid receptor binding" evidence=ISO] InterPro:IPR001494
InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166 SMART:SM00913
MGI:MGI:2385205 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0008565 GO:GO:0005643
GO:GO:0006606 InterPro:IPR013598 Pfam:PF08389 eggNOG:NOG237172
CTD:9670 GeneTree:ENSGT00530000063347 HOGENOM:HOG000049153
HOVERGEN:HBG052141 OMA:VDGRARC OrthoDB:EOG4K6G3G EMBL:AK129200
EMBL:BC031823 EMBL:AK052257 IPI:IPI00169541 IPI:IPI00453577
RefSeq:NP_666264.1 UniGene:Mm.287810 ProteinModelPortal:Q8K0C1
SMR:Q8K0C1 STRING:Q8K0C1 PhosphoSite:Q8K0C1 PaxDb:Q8K0C1
PRIDE:Q8K0C1 Ensembl:ENSMUST00000036156 GeneID:230673
KEGG:mmu:230673 NextBio:380039 Bgee:Q8K0C1 CleanEx:MM_IPO13
Genevestigator:Q8K0C1 GermOnline:ENSMUSG00000033365 Uniprot:Q8K0C1
Length = 963
Score = 108 (43.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 35/134 (26%), Positives = 60/134 (44%)
Query: 6 SLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLH 65
+++ V +H LY +PN K A +WL Q Q S AW H ++W+ LL
Sbjct: 22 TVENVEKALHQLYYDPNIDNKNLAQKWLMQAQVSPQAW--------H-FSWQ-----LLQ 67
Query: 66 QNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXX 125
+++ E YF A + K+ + ++P++ + SL+ L + R S K ++T+
Sbjct: 68 PDKVP-EIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGS-KIVLTRLCV 125
Query: 126 XXXXXXXQM--SAW 137
M AW
Sbjct: 126 ALASLALSMMPDAW 139
Score = 50 (22.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 209 LQTKVLKCFTSW 220
++ KVLKCF+SW
Sbjct: 218 VRQKVLKCFSSW 229
>RGD|620071 [details] [associations]
symbol:Ipo13 "importin 13" species:10116 "Rattus norvegicus"
[GO:0002147 "glucocorticoid receptor import into nucleus"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006606 "protein import into nucleus" evidence=ISO] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0035259
"glucocorticoid receptor binding" evidence=IPI] [GO:0042564
"NLS-dependent protein nuclear import complex" evidence=NAS]
InterPro:IPR001494 InterPro:IPR016024 Pfam:PF03810 PROSITE:PS50166
SMART:SM00913 RGD:620071 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0008565 GO:GO:0005643 InterPro:IPR013598
Pfam:PF08389 eggNOG:NOG237172 CTD:9670 HOGENOM:HOG000049153
HOVERGEN:HBG052141 OrthoDB:EOG4K6G3G EMBL:AF110195 IPI:IPI00203944
RefSeq:NP_446230.1 UniGene:Rn.14252 ProteinModelPortal:Q9JM04
STRING:Q9JM04 PRIDE:Q9JM04 GeneID:116458 KEGG:rno:116458
InParanoid:Q9JM04 NextBio:618970 ArrayExpress:Q9JM04
Genevestigator:Q9JM04 GermOnline:ENSRNOG00000019758 GO:GO:0042564
GO:GO:0002147 Uniprot:Q9JM04
Length = 963
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 49/224 (21%), Positives = 85/224 (37%)
Query: 6 SLDTVYAVVHTLYLNPNKTEKEKASQWLHQLQKSIYAWKIADEMLRHIYAWKIADEMLLH 65
+++ V +H LY +PN K A +WL Q Q S AW H ++W+ LL
Sbjct: 22 TVENVEKALHQLYYDPNIENKNLAQKWLMQAQVSPQAW--------H-FSWQ-----LLQ 67
Query: 66 QNELGLEAVYFSAQTMRQKVQNAFFELPSESHVSLRDSLIEHLCRTNDTSGKNIITQXXX 125
+++ E YF A + K+ + ++P++ + SL+ + R S K ++T+
Sbjct: 68 PDKVP-EIQYFGASALHIKISRYWSDIPTDQYESLKAHSFTQITRFASGS-KIVLTRLCV 125
Query: 126 XXXXXXXQM--SAWEKPVVYIIE-------KLSHKGSIXXXXXXXXXXXXXXXXXKLGKN 176
M AW V ++ + +G +L +
Sbjct: 126 ALASLALSMMPDAWPCAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQY 185
Query: 177 RREEFEEELKAAGPIVIEFLKTCQANCGDNVSLQTKVLKCFTSW 220
R+ L V L+ ++ KVLKCF+SW
Sbjct: 186 RKGLVRASLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSW 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.129 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 238 211 0.00081 112 3 11 22 0.37 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 610 (65 KB)
Total size of DFA: 197 KB (2110 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.76u 0.08s 16.84t Elapsed: 00:00:09
Total cpu time: 16.77u 0.08s 16.85t Elapsed: 00:00:09
Start: Thu Aug 15 14:23:15 2013 End: Thu Aug 15 14:23:24 2013