Query psy13064
Match_columns 192
No_of_seqs 220 out of 1242
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 18:32:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13064.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13064hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a6t_A SPAC19A8.12; alpha/beta 100.0 1.7E-47 5.7E-52 329.9 13.4 148 7-190 8-155 (271)
2 2qkl_B SPAC19A8.12 protein, SP 100.0 5.2E-41 1.8E-45 252.8 7.9 92 8-99 4-95 (95)
3 3i7u_A AP4A hydrolase; nudix p 99.6 8.4E-16 2.9E-20 117.8 7.5 50 137-190 5-54 (134)
4 3u53_A BIS(5'-nucleosyl)-tetra 99.6 1E-15 3.5E-20 118.4 7.9 54 137-190 4-65 (155)
5 3q1p_A Phosphohydrolase (MUTT/ 99.6 2.8E-15 9.6E-20 122.3 8.4 57 131-190 63-119 (205)
6 2yyh_A MUTT domain, 8-OXO-DGTP 99.6 3.8E-15 1.3E-19 112.3 7.7 61 129-190 3-66 (139)
7 2jvb_A Protein PSU1, mRNA-deca 99.6 2.4E-15 8.1E-20 114.0 5.7 56 134-190 2-57 (146)
8 2o1c_A DATP pyrophosphohydrola 99.5 1.2E-14 4.3E-19 109.2 7.9 53 138-190 11-63 (150)
9 1ktg_A Diadenosine tetraphosph 99.5 2.2E-14 7.4E-19 107.3 6.5 54 137-190 4-59 (138)
10 2pbt_A AP4A hydrolase; nudix p 99.5 4.7E-14 1.6E-18 104.7 7.2 52 135-190 3-54 (134)
11 3f6a_A Hydrolase, nudix family 99.5 4.7E-14 1.6E-18 109.0 7.5 51 137-190 7-57 (159)
12 3o8s_A Nudix hydrolase, ADP-ri 99.5 3.5E-14 1.2E-18 115.9 7.0 56 131-190 65-120 (206)
13 3fcm_A Hydrolase, nudix family 99.5 5.1E-14 1.7E-18 113.4 7.2 52 138-190 47-98 (197)
14 3i9x_A MUTT/nudix family prote 99.5 4.1E-14 1.4E-18 112.8 6.3 66 125-190 13-96 (187)
15 1k2e_A Nudix homolog; nudix/MU 99.5 6.4E-14 2.2E-18 108.3 6.9 50 138-190 3-52 (156)
16 2w4e_A MUTT/nudix family prote 99.5 9.9E-14 3.4E-18 106.3 7.9 53 137-190 6-61 (145)
17 1f3y_A Diadenosine 5',5'''-P1, 99.5 5.2E-14 1.8E-18 107.6 6.2 54 136-190 14-67 (165)
18 3gwy_A Putative CTP pyrophosph 99.5 9.5E-14 3.3E-18 104.9 7.6 55 134-190 4-63 (140)
19 2azw_A MUTT/nudix family prote 99.5 8.7E-14 3E-18 104.8 6.7 54 135-190 17-70 (148)
20 3h95_A Nucleoside diphosphate- 99.5 1.2E-13 4.2E-18 111.5 7.8 60 131-190 21-81 (199)
21 3grn_A MUTT related protein; s 99.4 1.5E-13 5.3E-18 105.2 7.6 54 136-190 8-65 (153)
22 1rya_A GDP-mannose mannosyl hy 99.4 1.5E-13 5E-18 105.1 7.5 53 137-190 19-73 (160)
23 2fvv_A Diphosphoinositol polyp 99.4 1.4E-13 4.8E-18 112.1 7.8 51 139-189 43-94 (194)
24 1vcd_A NDX1; nudix protein, di 99.4 1.3E-13 4.5E-18 101.5 6.7 50 138-190 4-53 (126)
25 3id9_A MUTT/nudix family prote 99.4 1.8E-13 6.2E-18 106.6 7.7 52 137-190 24-75 (171)
26 3son_A Hypothetical nudix hydr 99.4 2E-13 6.9E-18 103.9 7.3 52 138-190 7-60 (149)
27 3eds_A MUTT/nudix family prote 99.4 1.1E-13 3.7E-18 106.8 5.7 52 135-189 20-71 (153)
28 3gg6_A Nudix motif 18, nucleos 99.4 2.3E-13 7.9E-18 104.3 7.5 52 138-190 22-75 (156)
29 1sjy_A MUTT/nudix family prote 99.4 2.2E-13 7.5E-18 104.0 7.3 54 136-190 13-72 (159)
30 3cng_A Nudix hydrolase; struct 99.4 2.7E-13 9.2E-18 108.7 7.8 60 129-190 33-94 (189)
31 4dyw_A MUTT/nudix family prote 99.4 3.6E-13 1.2E-17 104.4 8.2 55 134-190 27-83 (157)
32 2fb1_A Conserved hypothetical 99.4 1.9E-13 6.5E-18 113.8 6.7 67 125-191 2-72 (226)
33 1v8y_A ADP-ribose pyrophosphat 99.4 2.6E-13 8.8E-18 106.3 7.0 56 132-189 30-88 (170)
34 3o6z_A GDP-mannose pyrophospha 99.4 4.3E-13 1.5E-17 108.2 7.2 54 136-190 45-107 (191)
35 2yvp_A NDX2, MUTT/nudix family 99.4 3.8E-13 1.3E-17 106.2 6.5 55 135-190 40-97 (182)
36 3r03_A Nudix hydrolase; struct 99.4 4.9E-13 1.7E-17 100.5 6.8 55 135-190 7-64 (144)
37 3shd_A Phosphatase NUDJ; nudix 99.4 4.2E-13 1.5E-17 102.3 6.3 51 138-190 7-58 (153)
38 2kdv_A RNA pyrophosphohydrolas 99.4 6.8E-13 2.3E-17 104.3 7.7 53 136-190 8-60 (164)
39 3exq_A Nudix family hydrolase; 99.4 3.4E-13 1.2E-17 104.9 5.8 56 135-190 9-66 (161)
40 2b0v_A Nudix hydrolase; struct 99.4 8.5E-13 2.9E-17 100.1 7.3 50 139-190 11-62 (153)
41 1g0s_A Hypothetical 23.7 kDa p 99.4 7E-13 2.4E-17 108.7 6.8 55 136-190 57-119 (209)
42 1mut_A MUTT, nucleoside tripho 99.4 3.1E-13 1.1E-17 99.3 4.1 51 139-190 7-60 (129)
43 3ees_A Probable pyrophosphohyd 99.4 1.7E-12 5.7E-17 98.0 7.7 54 135-190 21-77 (153)
44 3f13_A Putative nudix hydrolas 99.4 8.4E-13 2.9E-17 104.6 6.3 50 137-190 17-66 (163)
45 3q93_A 7,8-dihydro-8-oxoguanin 99.3 1.6E-12 5.4E-17 103.3 7.6 49 141-190 29-79 (176)
46 2rrk_A ORF135, CTP pyrophospho 99.3 1.5E-12 5.3E-17 97.1 6.9 54 135-190 8-64 (140)
47 2b06_A MUTT/nudix family prote 99.3 1.7E-12 5.8E-17 99.1 7.2 59 132-190 4-65 (155)
48 3oga_A Nucleoside triphosphata 99.3 2.2E-12 7.5E-17 99.9 7.9 51 138-190 30-84 (165)
49 3hhj_A Mutator MUTT protein; n 99.3 1.4E-12 4.6E-17 100.4 6.6 53 137-190 30-85 (158)
50 2pqv_A MUTT/nudix family prote 99.3 1.3E-12 4.4E-17 99.9 6.0 48 138-190 21-68 (154)
51 2fkb_A Putative nudix hydrolas 99.3 3E-12 1E-16 100.4 7.2 52 138-190 39-95 (180)
52 1vhz_A ADP compounds hydrolase 99.3 2.5E-12 8.4E-17 104.6 6.8 50 138-189 51-103 (198)
53 2fml_A MUTT/nudix family prote 99.3 3.6E-12 1.2E-16 109.0 8.1 58 132-189 35-98 (273)
54 1hzt_A Isopentenyl diphosphate 99.3 3E-12 1E-16 102.0 6.9 52 138-190 34-90 (190)
55 2qjt_B Nicotinamide-nucleotide 99.3 3.2E-12 1.1E-16 110.4 7.6 58 131-190 203-262 (352)
56 3q91_A Uridine diphosphate glu 99.3 2.5E-12 8.5E-17 107.5 6.3 59 132-190 32-125 (218)
57 1nqz_A COA pyrophosphatase (MU 99.3 3.5E-12 1.2E-16 101.8 6.8 54 137-190 35-93 (194)
58 1q27_A Putative nudix hydrolas 99.3 2.8E-12 9.5E-17 99.8 5.5 54 136-190 34-92 (171)
59 2qjo_A Bifunctional NMN adenyl 99.3 5.4E-12 1.9E-16 108.1 7.9 57 132-190 199-257 (341)
60 3gz5_A MUTT/nudix family prote 99.3 4.3E-12 1.5E-16 106.6 6.7 60 131-190 17-82 (240)
61 1mk1_A ADPR pyrophosphatase; n 99.3 4.3E-12 1.5E-16 103.3 6.1 55 135-190 42-100 (207)
62 2dsc_A ADP-sugar pyrophosphata 99.2 1.6E-11 5.5E-16 100.2 6.9 53 138-190 63-121 (212)
63 1vk6_A NADH pyrophosphatase; 1 99.2 1.9E-11 6.6E-16 105.2 6.8 93 88-190 98-193 (269)
64 1x51_A A/G-specific adenine DN 99.2 2.7E-11 9.1E-16 93.0 5.5 52 138-189 21-78 (155)
65 3bho_A Cleavage and polyadenyl 99.1 9E-11 3.1E-15 98.8 7.4 64 124-189 47-111 (208)
66 1u20_A U8 snoRNA-binding prote 99.1 3.8E-11 1.3E-15 98.7 4.0 40 149-190 56-96 (212)
67 3e57_A Uncharacterized protein 99.1 6.8E-11 2.3E-15 99.2 4.4 49 139-189 71-132 (211)
68 3fjy_A Probable MUTT1 protein; 99.0 1.2E-10 4E-15 102.4 4.7 44 146-190 35-78 (364)
69 1q33_A Pyrophosphatase, ADP-ri 99.0 6.4E-10 2.2E-14 96.3 7.2 40 150-190 140-179 (292)
70 3qsj_A Nudix hydrolase; struct 98.9 4.2E-10 1.4E-14 95.2 4.6 56 135-190 7-89 (232)
71 2xsq_A U8 snoRNA-decapping enz 98.9 6.5E-10 2.2E-14 92.5 4.0 39 150-190 66-105 (217)
72 3fsp_A A/G-specific adenine gl 98.8 2.3E-09 8E-14 95.2 5.5 51 138-190 242-295 (369)
73 2dho_A Isopentenyl-diphosphate 98.7 3.2E-08 1.1E-12 83.2 6.5 52 138-190 61-126 (235)
74 2pny_A Isopentenyl-diphosphate 98.6 2.9E-08 9.9E-13 84.1 5.9 52 138-190 72-137 (246)
75 3kvh_A Protein syndesmos; NUDT 98.6 1.3E-08 4.6E-13 85.6 2.9 37 152-189 46-83 (214)
76 3rh7_A Hypothetical oxidoreduc 98.2 7.4E-07 2.5E-11 78.6 4.3 47 136-190 183-230 (321)
77 3dup_A MUTT/nudix family prote 98.2 3E-06 1E-10 74.3 7.6 49 141-189 123-178 (300)
78 3fxt_A Nucleoside diphosphate- 96.5 0.00067 2.3E-08 52.1 1.1 40 86-130 57-108 (113)
79 1zl8_A LIN-7; heterodimer, alp 23.6 37 0.0013 22.4 1.6 14 174-187 38-51 (53)
80 3gcg_B MAP, L0028 (mitochondri 20.8 46 0.0016 26.9 2.0 59 15-77 59-119 (172)
No 1
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=100.00 E-value=1.7e-47 Score=329.85 Aligned_cols=148 Identities=41% Similarity=0.748 Sum_probs=134.6
Q ss_pred CCCCCchHHHHhhhhhhcccCCcccccchhHHHHHHhhhhhhhhhcccccCccCcccCHHHHHHHHHhhCCcchhhhhhh
Q psy13064 7 KPYTIRKDILDDLSSRFVINIPHEERGDVIRICFQMELAYWFYLDFYCTQDESLFKAGLKEFFFQMFHHIPSLTHFARKI 86 (192)
Q Consensus 7 ~~~~~~~~ilddl~~RFiiN~P~ee~~~~~rl~fqie~A~WfY~Df~~~~~~~lp~~~~~~F~~~lf~~~p~l~~~~~~~ 86 (192)
.....++++|||||+|||+|+|++|+++++|||||||+|||||+||++.++|++|+++++.|+.++|+|||.+.+|....
T Consensus 8 ~~~~~~~~~l~dl~~rfi~n~p~~~~~~~~~~~f~ie~a~wfy~d~~~~~~~~~p~~~~~~f~~~~f~~~~~l~~~~~~~ 87 (271)
T 2a6t_A 8 FTNATFSQVLDDLSARFILNLPAEEQSSVERLCFQIEQAHWFYEDFIRAQNDQLPSLGLRVFSAKLFAHCPLLWKWSKVH 87 (271)
T ss_dssp CSCCCTHHHHHHHHHHHTTTSCGGGTTCHHHHHHHHHHHHHHHHHTHHHHCSSSCCCCHHHHHHHHHTTCHHHHHC---C
T ss_pred cCCCCHHHHHHHHHHHHhhcCCHHHhccHHHHHHHHHHHHHHHHHhhhhcccCCCcccHHHHHHHHhhhhhhhhcccccc
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred hhHHHHhhhccccccccceeeeccchhhhhHhhhhhhhhhhhhhhcccccceEEEEEEeCCCCEEEEEEEeCCCCcEEcC
Q psy13064 87 DTVLDDWRHYKQSVPTFGAILIDKSLTQVLLFLRQGLTVLDDWRHYKQSVPTFGAILIDKSLTQVLLVQSFFARASWGFP 166 (192)
Q Consensus 87 ~~~~~~~~~y~~~vp~~~~i~~~~~~~~~~~v~~~~~~~l~~~~~Y~~~ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fP 166 (192)
+..+.+|+.|+..|++ +|||+++++.++|||++++..++.|+||
T Consensus 88 ~~~~~~~~~~~~~v~~------------------------------------v~avv~~~~~~~vLLv~r~~~~g~W~lP 131 (271)
T 2a6t_A 88 EEAFDDFLRYKTRIPV------------------------------------RGAIMLDMSMQQCVLVKGWKASSGWGFP 131 (271)
T ss_dssp CHHHHHHHHHSCCCCE------------------------------------EEEEEBCSSSSEEEEEEESSTTCCCBCS
T ss_pred hhHHHHHHhcCCCCCe------------------------------------EEEEEEECCCCEEEEEEEeCCCCeEECC
Confidence 8888888888777776 9999999766899999987556889999
Q ss_pred ceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 167 KGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 167 kGkie~gEs~~ecAiREv~EE~g~ 190 (192)
||+++.|||+.+||+||++||||=
T Consensus 132 gG~ve~gEs~~eAA~REl~EEtGl 155 (271)
T 2a6t_A 132 KGKIDKDESDVDCAIREVYEETGF 155 (271)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHCC
T ss_pred cccCCCCcCHHHHHHHHHHHHhCC
Confidence 999999999999999999999994
No 2
>2qkl_B SPAC19A8.12 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} SCOP: a.242.1.1
Probab=100.00 E-value=5.2e-41 Score=252.82 Aligned_cols=92 Identities=39% Similarity=0.736 Sum_probs=86.1
Q ss_pred CCCCchHHHHhhhhhhcccCCcccccchhHHHHHHhhhhhhhhhcccccCccCcccCHHHHHHHHHhhCCcchhhhhhhh
Q psy13064 8 PYTIRKDILDDLSSRFVINIPHEERGDVIRICFQMELAYWFYLDFYCTQDESLFKAGLKEFFFQMFHHIPSLTHFARKID 87 (192)
Q Consensus 8 ~~~~~~~ilddl~~RFiiN~P~ee~~~~~rl~fqie~A~WfY~Df~~~~~~~lp~~~~~~F~~~lf~~~p~l~~~~~~~~ 87 (192)
...++++||||||+|||||+|++|++|++|||||||+|||||+||+|++||+||++++++|+++||+|||.|+|+..+++
T Consensus 4 ~~~~~~~iLdDL~~RFIiN~P~eel~s~eRl~FqiEeA~WfY~Df~~~~np~Lp~~~lk~F~~~if~~cp~L~~~~~~~~ 83 (95)
T 2qkl_B 4 TNATFSQVLDDLSARFILNLPAEEQSSVERLCFQIEQAHWFYEDFIRAQNDQLPSLGLRVFSAKLFAHCPLLWKWSKVHE 83 (95)
T ss_dssp TTCCHHHHHHHHHHHHTTTCCGGGSSCHHHHHHHHHHHHHHHHHTTTTTCTTSCCCCHHHHHHHHHHHCTHHHHHHTCCH
T ss_pred CcCCHHHHHHHHHHHHHHcCCHHHhhhHHHHHHHHHhheeehcccccccCCCCCCCcHHHHHHHHHHhCHHHHhccccHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhcccc
Q psy13064 88 TVLDDWRHYKQS 99 (192)
Q Consensus 88 ~~~~~~~~y~~~ 99 (192)
+++++|++||++
T Consensus 84 ~~~~~F~~YK~~ 95 (95)
T 2qkl_B 84 EAFDDFLRYKTR 95 (95)
T ss_dssp HHHHHHHC----
T ss_pred HHHHHHHHhccC
Confidence 999999999873
No 3
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.61 E-value=8.4e-16 Score=117.78 Aligned_cols=50 Identities=32% Similarity=0.553 Sum_probs=44.8
Q ss_pred ceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
-++|+|++++ ++|||+++ .++.|+||||++++|||+.+||+||++||||=
T Consensus 5 ~aag~vv~~~--~~vLL~~r--~~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl 54 (134)
T 3i7u_A 5 FSAGGVLFKD--GEVLLIKT--PSNVWSFPKGNIEPGEKPEETAVREVWEETGV 54 (134)
T ss_dssp EEEEEEEEET--TEEEEEEC--TTSCEECCEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred EEEEEEEEEC--CEEEEEEe--CCCcEECCeeEecCCCCHHHHHHHHHHHhcCc
Confidence 3689999885 69999997 36789999999999999999999999999983
No 4
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.61 E-value=1e-15 Score=118.40 Aligned_cols=54 Identities=26% Similarity=0.348 Sum_probs=46.9
Q ss_pred ceEEEEEEe--------CCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILID--------KSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n--------~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
-+||+|++. .+..++||+|+..+.+.|+||||++++|||+.+||+||++||||-
T Consensus 4 ra~G~iifr~~~~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl 65 (155)
T 3u53_A 4 RACGLIIFRRCLIPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGI 65 (155)
T ss_dssp CEEEEEEEEECCCSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCC
T ss_pred eEeEEEEEccccccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCC
Confidence 458999985 335689999986556789999999999999999999999999994
No 5
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.58 E-value=2.8e-15 Score=122.31 Aligned_cols=57 Identities=19% Similarity=0.325 Sum_probs=47.7
Q ss_pred hcccccceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 131 HYKQSVPTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 131 ~Y~~~ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.|.++.++++++++++ ++|||+++. ..|.|+||||+++.|||+.+||+||++||||=
T Consensus 63 ~~~~~~~~v~~vv~~~--~~vLLv~r~-~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 119 (205)
T 3q1p_A 63 GYQTPKVDIRAVVFQN--EKLLFVKEK-SDGKWALPGGWADVGYTPTEVAAKEVFEETGY 119 (205)
T ss_dssp SSCCCEEEEEEEEEET--TEEEEEEC----CCEECSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred CCCCCcceEEEEEEEC--CEEEEEEEc-CCCcEECCcCccCCCCCHHHHHHHHHHHHHCC
Confidence 4566666788999983 699999985 46799999999999999999999999999993
No 6
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.58 E-value=3.8e-15 Score=112.31 Aligned_cols=61 Identities=16% Similarity=0.160 Sum_probs=51.0
Q ss_pred hhhcccccceEEEEEEeC-CCCE--EEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 129 WRHYKQSVPTFGAILIDK-SLTQ--VLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 129 ~~~Y~~~ip~~GaIi~n~-~~~k--VLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
|. |+++.+++++|+++. ..++ +||+++...++.|+||||+++.|||+.+||+||++||||-
T Consensus 3 ~~-y~~p~~~v~~vi~~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 66 (139)
T 2yyh_A 3 FN-VKTPLLATDVIIRLWDGENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGL 66 (139)
T ss_dssp CC-CCCCEEEEEEEEEEEETTEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred cc-ccCCeEEEEEEEEEEcCCCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCC
Confidence 45 778888899999871 2356 9999986544569999999999999999999999999994
No 7
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.4e-15 Score=114.05 Aligned_cols=56 Identities=41% Similarity=0.773 Sum_probs=49.7
Q ss_pred cccceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 134 QSVPTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 134 ~~ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++++|+++++++.++|||+++. .++.|.||||+++.|||+.+||+||++||||-
T Consensus 2 ~~i~~~~~~i~~~~~~~vLl~~r~-~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl 57 (146)
T 2jvb_A 2 KSIPVRGAAIFNENLSKILLVQGT-ESDSWSFPRGKISKDENDIDCCIREVKEEIGF 57 (146)
T ss_dssp CCSCCEEEEEBCTTSSEEEEECCS-SSSCCBCCEECCCSSSCHHHHHHHHHHHHTSC
T ss_pred ceeEEEEEEEEeCCCCEEEEEEEc-CCCcEECCcccCCCCCCHHHHHHHHHHHHHCC
Confidence 456679999998766799999975 46899999999999999999999999999994
No 8
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.54 E-value=1.2e-14 Score=109.20 Aligned_cols=53 Identities=23% Similarity=0.276 Sum_probs=46.5
Q ss_pred eEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++++++.+.+++||+++....|.|.||||+++.|||+.+||+||++||||-
T Consensus 11 ~v~~~i~~~~~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 63 (150)
T 2o1c_A 11 SILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTI 63 (150)
T ss_dssp EEEEEEEETTTCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEeCCCCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 57788888765799999975446799999999999999999999999999984
No 9
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.50 E-value=2.2e-14 Score=107.26 Aligned_cols=54 Identities=30% Similarity=0.394 Sum_probs=46.1
Q ss_pred ceEEEEEEeCC--CCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILIDKS--LTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n~~--~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.++++|+++.+ .++|||+++...++.|.||||+++.|||+.+||+||++||||=
T Consensus 4 ~~~~~vi~~~~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 59 (138)
T 1ktg_A 4 KAAGLVIYRKLAGKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANI 59 (138)
T ss_dssp EEEEEEEEEEETTEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEEEecCCCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCC
Confidence 35788888763 3589999985455699999999999999999999999999994
No 10
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.49 E-value=4.7e-14 Score=104.68 Aligned_cols=52 Identities=31% Similarity=0.494 Sum_probs=45.6
Q ss_pred ccceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 135 SVPTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 135 ~ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.+.++++|++++ ++|||+++. ++.|+||||+++.|||+.+||+||++||||=
T Consensus 3 ~~~~~~~vi~~~--~~vLl~~r~--~~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl 54 (134)
T 2pbt_A 3 KEFSAGGVLFKD--GEVLLIKTP--SNVWSFPKGNIEPGEKPEETAVREVWEETGV 54 (134)
T ss_dssp EEEEEEEEEEET--TEEEEEECT--TSCEECCEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred cceEEEEEEEEC--CEEEEEEeC--CCcEECCccccCCCCCHHHHHHHHHHHHHCC
Confidence 445688888884 599999985 3899999999999999999999999999993
No 11
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.49 E-value=4.7e-14 Score=108.96 Aligned_cols=51 Identities=24% Similarity=0.147 Sum_probs=45.0
Q ss_pred ceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.++++|++++ ++|||+++. ..+.|.||||+++.|||+.+||+||++||||=
T Consensus 7 ~~v~~vi~~~--~~vLL~~r~-~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 57 (159)
T 3f6a_A 7 FTVSVFIVCK--DKVLLHLHK-KAKKMLPLGGHIEVNELPEEACIREAKEEAGL 57 (159)
T ss_dssp EEEEEEEEET--TEEEEEECS-SSCCEECEEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEEEC--CEEEEEEcC-CCCeEECCccCccCCCCHHHHHHHHHHHHhCC
Confidence 3577888883 699999986 46889999999999999999999999999994
No 12
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.49 E-value=3.5e-14 Score=115.88 Aligned_cols=56 Identities=23% Similarity=0.335 Sum_probs=47.2
Q ss_pred hcccccceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 131 HYKQSVPTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 131 ~Y~~~ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.|.++.++++++++++ ++|||+++. .+.|+||||+++.|||+.+||+||++||||=
T Consensus 65 ~y~~~~~~v~~vv~~~--~~vLLvrr~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 120 (206)
T 3o8s_A 65 GYQTPKLDTRAAIFQE--DKILLVQEN--DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGL 120 (206)
T ss_dssp ---CCEEEEEEEEEET--TEEEEEECT--TSCEECSEEECCTTSCHHHHHHHHHHHHHCE
T ss_pred CCCCCCccEEEEEEEC--CEEEEEEec--CCeEECCeeccCCCCCHHHHHHHHHHHHHCC
Confidence 4555666688888885 699999985 7889999999999999999999999999993
No 13
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.48 E-value=5.1e-14 Score=113.38 Aligned_cols=52 Identities=21% Similarity=0.366 Sum_probs=47.0
Q ss_pred eEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++++++.+.++|||+++. ..+.|.||||+++.|||+.+||+||++||||-
T Consensus 47 ~~~~vv~~~~~~~vLL~~r~-~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl 98 (197)
T 3fcm_A 47 TSSAFAVNKERNKFLMIHHN-IYNSWAWTGGHSDNEKDQLKVAIKELKEETGV 98 (197)
T ss_dssp EEEEEEECTTSCEEEEEEET-TTTEEECEEEECTTCCBHHHHHHHHHHHHHCC
T ss_pred EEEEEEEECCCCEEEEEEec-CCCCEECCccccCCCCCHHHHHHHHHHHHHCC
Confidence 68888888876799999985 56799999999999999999999999999994
No 14
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.47 E-value=4.1e-14 Score=112.83 Aligned_cols=66 Identities=21% Similarity=0.367 Sum_probs=48.0
Q ss_pred hhhhh--hhccccc-ceEEEEEEeCC------CCEEEEEEEe---------CCCCcEEcCceecCCCCCHHHHHHHHHHH
Q psy13064 125 VLDDW--RHYKQSV-PTFGAILIDKS------LTQVLLVQSF---------FARASWGFPKGKVNQDEPPMTCAIREVKI 186 (192)
Q Consensus 125 ~l~~~--~~Y~~~i-p~~GaIi~n~~------~~kVLLVk~~---------~~~~~W~fPkGkie~gEs~~ecAiREv~E 186 (192)
++..+ ..|+++. .+++++++..+ .++|||+++. ...+.|.||||+++.|||+.+||+||++|
T Consensus 13 ~~~~~~~~~~~~p~~~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~E 92 (187)
T 3i9x_A 13 ALKNYNAKEFRTPDGYTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEE 92 (187)
T ss_dssp ----------CCCSEEEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHH
T ss_pred HhccCCHhHcCCcccceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHH
Confidence 34444 4667776 67777776532 2489999983 24678999999999999999999999999
Q ss_pred Hhcc
Q psy13064 187 IFCQ 190 (192)
Q Consensus 187 E~g~ 190 (192)
|||=
T Consensus 93 EtGl 96 (187)
T 3i9x_A 93 ETSL 96 (187)
T ss_dssp HHCC
T ss_pred HHCC
Confidence 9994
No 15
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.47 E-value=6.4e-14 Score=108.33 Aligned_cols=50 Identities=24% Similarity=0.367 Sum_probs=44.4
Q ss_pred eEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++|+++ .++|||+++. ..+.|.||||+++.|||+.+||+||++||||-
T Consensus 3 ~~~~vi~~--~~~vLL~~r~-~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl 52 (156)
T 1k2e_A 3 VTSGVLVE--NGKVLLVKHK-RLGVYIYPGGHVEHNETPIEAVKREFEEETGI 52 (156)
T ss_dssp EEEEECEE--TTEEEEEECT-TTCSEECSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred EEEEEEEE--CCEEEEEEEc-CCCcEECCeeecCCCCCHHHHHHHHHHHHHCC
Confidence 47788888 4799999975 46789999999999999999999999999984
No 16
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.47 E-value=9.9e-14 Score=106.26 Aligned_cols=53 Identities=15% Similarity=0.088 Sum_probs=44.1
Q ss_pred ceEEEEEEeCCCCEEEEEEEeCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILIDKSLTQVLLVQSFFA---RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n~~~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+++++++++.+ +++||+++++. ++.|+||||++++|||+.+||+||++||||=
T Consensus 6 ~~v~vi~~~~~-~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl 61 (145)
T 2w4e_A 6 RAVFILPVTAQ-GEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGG 61 (145)
T ss_dssp EEEEEEEEETT-SEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCE
T ss_pred CEEEEEEEcCC-CEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCC
Confidence 45777878765 68999876532 2379999999999999999999999999983
No 17
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.47 E-value=5.2e-14 Score=107.61 Aligned_cols=54 Identities=20% Similarity=0.427 Sum_probs=46.4
Q ss_pred cceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 136 VPTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 136 ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.+++++++++.+ ++|||+++...++.|.||||+++.|||+.+||+||++||||-
T Consensus 14 ~~~v~~~i~~~~-~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 67 (165)
T 1f3y_A 14 RRNVGICLMNND-KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGV 67 (165)
T ss_dssp CCEEEEEEECTT-SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred eeeEEEEEECCC-CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCC
Confidence 346778888765 799999985335789999999999999999999999999994
No 18
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.47 E-value=9.5e-14 Score=104.91 Aligned_cols=55 Identities=24% Similarity=0.215 Sum_probs=45.0
Q ss_pred cccceEEEEEEeCCCCEEEEEEEeC-----CCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 134 QSVPTFGAILIDKSLTQVLLVQSFF-----ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 134 ~~ip~~GaIi~n~~~~kVLLVk~~~-----~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+.+.++++|+.+ .++|||+++.. .++.|+||||+++.||++.+||+||++||||-
T Consensus 4 ~~~~~v~~vi~~--~~~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl 63 (140)
T 3gwy_A 4 KSIEVVAAVIRL--GEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDY 63 (140)
T ss_dssp SCEEEEEEEEEE--TTEEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred eEEEEEEEEEEe--CCEEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCc
Confidence 456678888887 37999998753 24679999999999999999999999999994
No 19
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.46 E-value=8.7e-14 Score=104.83 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=46.7
Q ss_pred ccceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 135 SVPTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 135 ~ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
..+++++|+++++.++|||+++ .++.|+||||+++.|||+.+||+||+.||||=
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r--~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 70 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQA--PNGAYFLPGGEIEGTETKEEAIHREVLEELGI 70 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEEC--TTSCEECSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred eeeEEEEEEECCCCCeEEEEEc--CCCCEeCCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 3456778888875579999996 35899999999999999999999999999983
No 20
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.45 E-value=1.2e-13 Score=111.47 Aligned_cols=60 Identities=23% Similarity=0.257 Sum_probs=47.6
Q ss_pred hcccccceEEEEEEeCCCCEEEEEEEeC-CCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 131 HYKQSVPTFGAILIDKSLTQVLLVQSFF-ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 131 ~Y~~~ip~~GaIi~n~~~~kVLLVk~~~-~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.+.+...++++++++.+.++|||+|+.. ..+.|+||||+++.|||+.+||+||++||||=
T Consensus 21 ~~~~~~v~v~~~v~~~~~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl 81 (199)
T 3h95_A 21 QSMSHQVGVAGAVFDESTRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGI 81 (199)
T ss_dssp -----CCEEEEEEEETTTTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred ccCcccceEEEEEEeCCCCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 4555555677888887768999998753 25789999999999999999999999999994
No 21
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.45 E-value=1.5e-13 Score=105.19 Aligned_cols=54 Identities=26% Similarity=0.313 Sum_probs=45.8
Q ss_pred cceEEEEEEeCCCCEEEEEEEeCC----CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 136 VPTFGAILIDKSLTQVLLVQSFFA----RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 136 ip~~GaIi~n~~~~kVLLVk~~~~----~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
..++++|+++.+ ++|||+++... ++.|.||||+++.|||+.+||+||++||||-
T Consensus 8 ~~~v~~vi~~~~-~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl 65 (153)
T 3grn_A 8 IISVYALIRNEK-GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGI 65 (153)
T ss_dssp EEEEEEEEECTT-CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEEEcCC-CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCc
Confidence 345778888764 68999987632 4789999999999999999999999999994
No 22
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.45 E-value=1.5e-13 Score=105.08 Aligned_cols=53 Identities=19% Similarity=0.201 Sum_probs=45.6
Q ss_pred ceEEEEEEeCCCCEEEEEEEeCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILIDKSLTQVLLVQSFFA--RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n~~~~kVLLVk~~~~--~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.++++|+++.+ ++|||+++... .+.|+||||+++.|||+.+||+||++||||-
T Consensus 19 ~~v~~vi~~~~-~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl 73 (160)
T 1rya_A 19 VSLDFIVENSR-GEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGL 73 (160)
T ss_dssp EEEEEEEECTT-SCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSS
T ss_pred EEEEEEEEcCC-CEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC
Confidence 46788888754 68999988532 5789999999999999999999999999994
No 23
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.45 E-value=1.4e-13 Score=112.05 Aligned_cols=51 Identities=29% Similarity=0.354 Sum_probs=44.2
Q ss_pred EEEEEE-eCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhc
Q psy13064 139 FGAILI-DKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFC 189 (192)
Q Consensus 139 ~GaIi~-n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g 189 (192)
+++|++ ++..++|||+++...++.|+||||+++.|||+.+||+||++||||
T Consensus 43 ~~~vi~~~~~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtG 94 (194)
T 2fvv_A 43 AACLCFRSESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAG 94 (194)
T ss_dssp EEEEEESSTTCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHC
T ss_pred EEEEEEEECCCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhC
Confidence 566666 344689999998654679999999999999999999999999998
No 24
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.44 E-value=1.3e-13 Score=101.46 Aligned_cols=50 Identities=28% Similarity=0.392 Sum_probs=44.0
Q ss_pred eEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++|+++.+ +++||+++. .|.|+||||+++.|||+.+||+||++||||-
T Consensus 4 ~~~~vi~~~~-~~vLl~~r~--~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl 53 (126)
T 1vcd_A 4 GAGGVVFNAK-REVLLLRDR--MGFWVFPKGHPEPGESLEEAAVREVWEETGV 53 (126)
T ss_dssp EEEEEEECTT-SCEEEEECT--TSCEECCEECCCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEcCC-CEEEEEEEC--CCCccCCcCcCCCCCCHHHHHHHHHHHhhCc
Confidence 4778888865 589999985 3789999999999999999999999999984
No 25
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.44 E-value=1.8e-13 Score=106.56 Aligned_cols=52 Identities=31% Similarity=0.463 Sum_probs=45.0
Q ss_pred ceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
..+++|++++ ++|||+++...++.|+||||+++.|||+.+||+||++||||=
T Consensus 24 ~~v~~ii~~~--~~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl 75 (171)
T 3id9_A 24 VRVTGILIED--EKVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGL 75 (171)
T ss_dssp EEEEEEEEET--TEEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEEEC--CEEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCC
Confidence 3566777774 699999986557899999999999999999999999999994
No 26
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.43 E-value=2e-13 Score=103.86 Aligned_cols=52 Identities=17% Similarity=0.061 Sum_probs=43.2
Q ss_pred eEEEEEEe--CCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILID--KSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n--~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+++++++. +..++|||+++.. ++.|.||||+++.|||+.+||+||++||||-
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~-~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl 60 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTD-ADVWQFVAGGGEDEEAISETAKRESIEELNL 60 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESS-SSCEECEEEECCTTCCHHHHHHHHHHHHHTC
T ss_pred EEEEEEEEecCCCeEEEEEEEcC-CCCEeCCccccCCCCCHHHHHHHHHHHHhCC
Confidence 35566653 3346899999863 5899999999999999999999999999994
No 27
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.43 E-value=1.1e-13 Score=106.75 Aligned_cols=52 Identities=21% Similarity=0.384 Sum_probs=43.1
Q ss_pred ccceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhc
Q psy13064 135 SVPTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFC 189 (192)
Q Consensus 135 ~ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g 189 (192)
..+++++|+++.+ ++|||+++. ++.|+||||+++.|||+.+||+||++||||
T Consensus 20 ~~~~v~~ii~~~~-~~vLL~~r~--~~~w~lPgG~ve~gEs~~~aa~REl~EEtG 71 (153)
T 3eds_A 20 FXPSVAAVIKNEQ-GEILFQYPG--GEYWSLPAGAIELGETPEEAVVREVWEETG 71 (153)
T ss_dssp EEEEEEEEEBCTT-CCEEEECC-----CBBCSEEECCTTSCHHHHHHHHHHHHHC
T ss_pred EeeeEEEEEEcCC-CeEEEEEcC--CCcEECCccccCCCCCHHHHHHHHHHHHHC
Confidence 3456777777755 789998875 788999999999999999999999999998
No 28
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.43 E-value=2.3e-13 Score=104.27 Aligned_cols=52 Identities=29% Similarity=0.404 Sum_probs=43.8
Q ss_pred eEEEEEEeCCCCEEEEEEEeCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFA--RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~--~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++++++.+ ++|||+++.+. .+.|+||||+++.|||+.+||+||++||||=
T Consensus 22 ~v~~~i~~~~-~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl 75 (156)
T 3gg6_A 22 VVLAVFLSEQ-DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGL 75 (156)
T ss_dssp EEEEECBCTT-SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCE
T ss_pred EEEEEEEeCC-CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCc
Confidence 4555666654 79999998642 5789999999999999999999999999993
No 29
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.43 E-value=2.2e-13 Score=104.00 Aligned_cols=54 Identities=28% Similarity=0.420 Sum_probs=45.7
Q ss_pred cceEEEEEEeCCCCEEEEEEEeC------CCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 136 VPTFGAILIDKSLTQVLLVQSFF------ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 136 ip~~GaIi~n~~~~kVLLVk~~~------~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.+++++|+++.+ +++||+++.. ..+.|.||||+++.|||+.+||+||++||||-
T Consensus 13 ~~~~~~vi~~~~-~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 72 (159)
T 1sjy_A 13 LRAAGVVLLNER-GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGL 72 (159)
T ss_dssp EEEEEEEEBCTT-CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSC
T ss_pred EEeEEEEEEeCC-CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCc
Confidence 345777777754 7899998863 34789999999999999999999999999984
No 30
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.42 E-value=2.7e-13 Score=108.67 Aligned_cols=60 Identities=25% Similarity=0.286 Sum_probs=51.1
Q ss_pred hhhcccccceEEEEEEeCCCCEEEEEEEeC--CCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 129 WRHYKQSVPTFGAILIDKSLTQVLLVQSFF--ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 129 ~~~Y~~~ip~~GaIi~n~~~~kVLLVk~~~--~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+..|.++..++++|+.+ .++|||+++.. ..+.|.||||+++.|||+.+||+||++||||-
T Consensus 33 ~~~~~~~~~~v~~ii~~--~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 94 (189)
T 3cng_A 33 TIHYQNPKVIVGCIPEW--ENKVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANA 94 (189)
T ss_dssp EEECCCCEEEEEEEEEE--TTEEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CccCCCCceEEEEEEEe--CCEEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCC
Confidence 34577777788888888 36999999863 25789999999999999999999999999994
No 31
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.42 E-value=3.6e-13 Score=104.38 Aligned_cols=55 Identities=27% Similarity=0.405 Sum_probs=46.6
Q ss_pred cccceEEEEEEeCCCCEEEEEEEeC--CCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 134 QSVPTFGAILIDKSLTQVLLVQSFF--ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 134 ~~ip~~GaIi~n~~~~kVLLVk~~~--~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
....++++|+++ .++|||+++.. ..+.|.||||+++.|||+.+||+||++||||-
T Consensus 27 ~~~~~v~~vi~~--~~~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl 83 (157)
T 4dyw_A 27 QPRVGCGAAIVR--DGRILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGI 83 (157)
T ss_dssp CCEEEEEEEEEE--TTEEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSC
T ss_pred CceeEEEEEEEE--CCEEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCc
Confidence 344567888888 37999999864 35789999999999999999999999999994
No 32
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.42 E-value=1.9e-13 Score=113.81 Aligned_cols=67 Identities=18% Similarity=0.226 Sum_probs=54.1
Q ss_pred hhhhhhhcccccceEEEEEEe--CCCCEEEEEEEeC--CCCcEEcCceecCCCCCHHHHHHHHHHHHhccC
Q psy13064 125 VLDDWRHYKQSVPTFGAILID--KSLTQVLLVQSFF--ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQH 191 (192)
Q Consensus 125 ~l~~~~~Y~~~ip~~GaIi~n--~~~~kVLLVk~~~--~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~~ 191 (192)
|..+...|.++..++++||+. +..++|||+++.. ..+.|++|||+++.|||+.+||+||++||||-.
T Consensus 2 m~~~~~~~~~p~v~v~~vi~~~~~~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~ 72 (226)
T 2fb1_A 2 MKNYYSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLE 72 (226)
T ss_dssp --CTTTTSCCEEEEEEEEEEEEETTEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCC
T ss_pred CccccccCCCCeEEEEEEEEEEeCCCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCC
Confidence 444556788888888898884 4457999999753 257899999999999999999999999999953
No 33
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.42 E-value=2.6e-13 Score=106.28 Aligned_cols=56 Identities=21% Similarity=0.306 Sum_probs=47.4
Q ss_pred cccccceEEEEEEeCCCCEEEEEEEeC---CCCcEEcCceecCCCCCHHHHHHHHHHHHhc
Q psy13064 132 YKQSVPTFGAILIDKSLTQVLLVQSFF---ARASWGFPKGKVNQDEPPMTCAIREVKIIFC 189 (192)
Q Consensus 132 Y~~~ip~~GaIi~n~~~~kVLLVk~~~---~~~~W~fPkGkie~gEs~~ecAiREv~EE~g 189 (192)
+....+++++++++ .+++||+++.+ .++.|+||||+++.|||+.+||+||++||||
T Consensus 30 ~~~~~~~v~vii~~--~~~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtG 88 (170)
T 1v8y_A 30 IVEHKPAVAVIALR--EGRMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTG 88 (170)
T ss_dssp EEEECCEEEEEEEE--TTEEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred EEecCCeEEEEEEE--CCEEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHC
Confidence 44455678888888 47999998753 2468999999999999999999999999998
No 34
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.39 E-value=4.3e-13 Score=108.22 Aligned_cols=54 Identities=15% Similarity=0.147 Sum_probs=45.7
Q ss_pred cceEEEEEEeCCCCEEEEEEEeC---------CCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 136 VPTFGAILIDKSLTQVLLVQSFF---------ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 136 ip~~GaIi~n~~~~kVLLVk~~~---------~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
-+++++++++++.+++||+++++ .++.|+||||+++ |||+.+||+||++||||=
T Consensus 45 ~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~ 107 (191)
T 3o6z_A 45 GNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGY 107 (191)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-C
T ss_pred CCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCC
Confidence 34677888887668999998864 4567999999999 999999999999999994
No 35
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.39 E-value=3.8e-13 Score=106.18 Aligned_cols=55 Identities=24% Similarity=0.322 Sum_probs=45.3
Q ss_pred ccceEEEEEEeCCCCEEEEEEEeC---CCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 135 SVPTFGAILIDKSLTQVLLVQSFF---ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 135 ~ip~~GaIi~n~~~~kVLLVk~~~---~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
...++++++++.+ +++||+++.. .++.|+||||+++.|||+.+||+||++||||=
T Consensus 40 ~~~~v~v~i~~~~-~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl 97 (182)
T 2yvp_A 40 PVAASFVLPVTER-GTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGA 97 (182)
T ss_dssp SCEEEEEEEBCTT-SEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCE
T ss_pred cCCEEEEEEEcCC-CEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCC
Confidence 3346667777655 6999998753 24689999999999999999999999999983
No 36
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.39 E-value=4.9e-13 Score=100.49 Aligned_cols=55 Identities=31% Similarity=0.424 Sum_probs=45.5
Q ss_pred ccceEEEEEEeCCCCEEEEEEEeCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 135 SVPTFGAILIDKSLTQVLLVQSFFA---RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 135 ~ip~~GaIi~n~~~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.+.++++++++.+ ++|||+++... +|.|+||||+++.||++.+||+||++||||-
T Consensus 7 ~~~~~~~vi~~~~-~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl 64 (144)
T 3r03_A 7 ILLVTAAALIDPD-GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGV 64 (144)
T ss_dssp EEEEEEEEEBCTT-SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred eeEEEEEEEEcCC-CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCc
Confidence 3445667777755 68999997532 4789999999999999999999999999984
No 37
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.39 E-value=4.2e-13 Score=102.26 Aligned_cols=51 Identities=24% Similarity=0.334 Sum_probs=41.8
Q ss_pred eEEEEEEeCCCCEEEEEEEeC-CCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFF-ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~-~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++|+.+ .++|||+++.. ..+.|.||||+++.|||+.+||+||++||||=
T Consensus 7 ~v~~ii~~--~~~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl 58 (153)
T 3shd_A 7 TVACVVHA--EGKFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGI 58 (153)
T ss_dssp EEEEEEEE--TTEEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEe--CCEEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCc
Confidence 34555544 36999998753 34679999999999999999999999999994
No 38
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.39 E-value=6.8e-13 Score=104.28 Aligned_cols=53 Identities=26% Similarity=0.515 Sum_probs=46.5
Q ss_pred cceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 136 VPTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 136 ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.+++++++++.+ ++|||+++. ..+.|.||||+++.|||+.+||+||++||||-
T Consensus 8 ~~~v~~~i~~~~-~~vLl~~r~-~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~ 60 (164)
T 2kdv_A 8 RPNVGIVICNRQ-GQVMWARRF-GQHSWQFPQGGINPGESAEQAMYRELFEEVGL 60 (164)
T ss_dssp EEEEEEEEECTT-SEEEEEEET-TCCCEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CcEEEEEEEccC-CEEEEEEEc-CCCeEECCeeecCCCCCHHHHHHHHHHHHHCC
Confidence 346788888865 799999885 46789999999999999999999999999994
No 39
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.39 E-value=3.4e-13 Score=104.94 Aligned_cols=56 Identities=29% Similarity=0.272 Sum_probs=45.7
Q ss_pred ccceEEEEEEeCCCCEEEEEEEeCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 135 SVPTFGAILIDKSLTQVLLVQSFFA--RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 135 ~ip~~GaIi~n~~~~kVLLVk~~~~--~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
...++++++.+++.++|||+++... .+.|+||||+++.|||+.+||+||++||||-
T Consensus 9 ~~~~v~~vi~~~~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 66 (161)
T 3exq_A 9 VELVTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGL 66 (161)
T ss_dssp EEEEEEEEEBCTTTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCC
T ss_pred ceEEEEEEEEeCCCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCc
Confidence 3446777777766569999987532 3568899999999999999999999999994
No 40
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.37 E-value=8.5e-13 Score=100.13 Aligned_cols=50 Identities=20% Similarity=0.205 Sum_probs=40.8
Q ss_pred EEEEEEeCCCCEEEEEEEeCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 139 FGAILIDKSLTQVLLVQSFFA--RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 139 ~GaIi~n~~~~kVLLVk~~~~--~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+++|+.+ .+++||+++... ++.|.||||+++.|||+.+||+||++||||-
T Consensus 11 v~~ii~~--~~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl 62 (153)
T 2b0v_A 11 VAAVIEQ--DDKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGH 62 (153)
T ss_dssp EEEECEE--TTEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSE
T ss_pred EEEEEee--CCEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCc
Confidence 3444433 369999988642 4589999999999999999999999999984
No 41
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.37 E-value=7e-13 Score=108.69 Aligned_cols=55 Identities=15% Similarity=0.016 Sum_probs=46.2
Q ss_pred cceEEEEEEeCCCCEEEEEEEeCC--------CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 136 VPTFGAILIDKSLTQVLLVQSFFA--------RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 136 ip~~GaIi~n~~~~kVLLVk~~~~--------~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
-.++++++++++.++||||++++. ++.|+||+|++++|||+.+||+||++||||=
T Consensus 57 ~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl 119 (209)
T 1g0s_A 57 GHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGL 119 (209)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCc
Confidence 346777778866689999987642 3569999999999999999999999999994
No 42
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.36 E-value=3.1e-13 Score=99.32 Aligned_cols=51 Identities=18% Similarity=0.326 Sum_probs=42.9
Q ss_pred EEEEEEeCCCCEEEEEEEeCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 139 FGAILIDKSLTQVLLVQSFFA---RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 139 ~GaIi~n~~~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+.+++++.+ +++||+++... ++.|+||||+++.|||+.+||+||++||||-
T Consensus 7 ~~~ii~~~~-~~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~ 60 (129)
T 1mut_A 7 AVGIIRNEN-NEIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGI 60 (129)
T ss_dssp CCEECEETT-TEEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCC
T ss_pred EEEEEEecC-CEEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCC
Confidence 445556654 79999987532 4789999999999999999999999999985
No 43
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.35 E-value=1.7e-12 Score=98.00 Aligned_cols=54 Identities=24% Similarity=0.405 Sum_probs=43.5
Q ss_pred ccceEEEEEEeCCCCEEEEEEEeCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 135 SVPTFGAILIDKSLTQVLLVQSFFA---RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 135 ~ip~~GaIi~n~~~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.+.++++|+.+ + ++|||+++... +|.|+||||+++.||++.+||+||+.||||-
T Consensus 21 ~~~~~~~i~~~-~-~~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl 77 (153)
T 3ees_A 21 WIPVVAGFLRK-D-GKILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGI 77 (153)
T ss_dssp EEEEEEEEEEE-T-TEEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSC
T ss_pred eEEEEEEEEEE-C-CEEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCC
Confidence 44455555544 3 69999987532 3789999999999999999999999999984
No 44
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.35 E-value=8.4e-13 Score=104.57 Aligned_cols=50 Identities=26% Similarity=0.256 Sum_probs=39.4
Q ss_pred ceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.++++|+.++ +++||+++. ++.|+||||+++.|||+.+||+||++||||-
T Consensus 17 ~~~~~ii~~~--~~vLL~~r~--~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 66 (163)
T 3f13_A 17 RRATAIIEMP--DGVLVTASR--GGRYNLPGGKANRGELRSQALIREIREETGL 66 (163)
T ss_dssp EEEEEECEET--TEEEEEECC-----BBCSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEEeC--CEEEEEEEC--CCeEECCceeCCCCCCHHHHHHHHHHHHHCc
Confidence 3455555443 589999874 5789999999999999999999999999994
No 45
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.35 E-value=1.6e-12 Score=103.25 Aligned_cols=49 Identities=24% Similarity=0.163 Sum_probs=40.6
Q ss_pred EEEEeCCCCEEEEEEEeCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 141 AILIDKSLTQVLLVQSFFA--RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 141 aIi~n~~~~kVLLVk~~~~--~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+++++. .++|||+++... .+.|.||||+++.|||+.+||+||++||||=
T Consensus 29 ~~vi~~-~~~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl 79 (176)
T 3q93_A 29 LVLVLQ-PQRVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGL 79 (176)
T ss_dssp EEEEEC-SSEEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSC
T ss_pred EEEEEe-CCEEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCC
Confidence 334443 479999987532 5789999999999999999999999999993
No 46
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.34 E-value=1.5e-12 Score=97.08 Aligned_cols=54 Identities=26% Similarity=0.410 Sum_probs=43.5
Q ss_pred ccceEEEEEEeCCCCEEEEEEEeCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 135 SVPTFGAILIDKSLTQVLLVQSFFA---RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 135 ~ip~~GaIi~n~~~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.+.++++|+ +. .++|||+++... ++.|+||+|+++.||++.+||+||++||||-
T Consensus 8 ~~~~~~~ii-~~-~~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl 64 (140)
T 2rrk_A 8 MIEVVAAII-ER-DGKILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGI 64 (140)
T ss_dssp EEEEEEEEE-EE-TTEEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCE
T ss_pred cceEEEEEE-Ec-CCEEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCC
Confidence 344566666 43 369999987432 4899999999999999999999999999984
No 47
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.34 E-value=1.7e-12 Score=99.08 Aligned_cols=59 Identities=20% Similarity=0.201 Sum_probs=43.4
Q ss_pred cccccceEEEEEEeCCCCE--EEEEEEeCCC-CcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 132 YKQSVPTFGAILIDKSLTQ--VLLVQSFFAR-ASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 132 Y~~~ip~~GaIi~n~~~~k--VLLVk~~~~~-~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+.....++++|+.+++.++ +|++++...+ ..|.||||+++.|||+.+||+||++||||-
T Consensus 4 ~~~~~~~~~~ii~~~~~~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl 65 (155)
T 2b06_A 4 SQLTILTNICLIEDLETQRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGL 65 (155)
T ss_dssp GGCEEEEEEEEEEETTTTEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSE
T ss_pred CcCcEEEEEEEEEECCCCeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCc
Confidence 4455567888888854333 7777654221 238999999999999999999999999984
No 48
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.34 E-value=2.2e-12 Score=99.85 Aligned_cols=51 Identities=16% Similarity=0.216 Sum_probs=40.5
Q ss_pred eEEEEEEeCCCCEEEEEEEeCC----CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFA----RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~----~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++|+ +.+ ++|||+++... .+.|+||||+++.|||+.+||+||++||||-
T Consensus 30 ~~~~ii-~~~-~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl 84 (165)
T 3oga_A 30 IVCPLI-QND-GCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGE 84 (165)
T ss_dssp EEEEEE-EET-TEEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCS
T ss_pred EEEEEE-eCC-CEEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 344444 433 79999987532 3789999999999999999999999999994
No 49
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.34 E-value=1.4e-12 Score=100.39 Aligned_cols=53 Identities=34% Similarity=0.496 Sum_probs=44.1
Q ss_pred ceEEEEEEeCCCCEEEEEEEeCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILIDKSLTQVLLVQSFFA---RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n~~~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.++++++++.+ ++|||+++... +|.|+||||+++.||++.+||+||+.||||-
T Consensus 30 ~~~~~~i~~~~-~~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl 85 (158)
T 3hhj_A 30 IVVACALLDQD-NRVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGV 85 (158)
T ss_dssp EEEEEEEBCTT-SEEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEEeCC-CEEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCc
Confidence 34666666654 79999997532 4789999999999999999999999999994
No 50
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.33 E-value=1.3e-12 Score=99.92 Aligned_cols=48 Identities=17% Similarity=0.293 Sum_probs=42.3
Q ss_pred eEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++|++++ +++||+++ .+.|.||||+++.|||+.+||+||++||||=
T Consensus 21 ~~~~ii~~~--~~vLl~~r---~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl 68 (154)
T 2pqv_A 21 RATALIVQN--HKLLVTKD---KGKYYTIGGAIQVNESTEDAVVREVKEELGV 68 (154)
T ss_dssp EEEECCEET--TEEEEEEE---TTEEECEEEECBTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEEC--CEEEEEec---CCeEECcccCcCCCCCHHHHHHHHHHHHhCC
Confidence 466777763 69999988 5789999999999999999999999999984
No 51
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.31 E-value=3e-12 Score=100.37 Aligned_cols=52 Identities=17% Similarity=0.107 Sum_probs=43.4
Q ss_pred eEEEEEEeCCCCEEEEEEEeCC----CCcEEc-CceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFA----RASWGF-PKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~----~~~W~f-PkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++++++.+ +++||+++... +|.|.| |||+++.|||+.+||+||++||||-
T Consensus 39 ~~~v~i~~~~-~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl 95 (180)
T 2fkb_A 39 ATYIVVHDGM-GKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGI 95 (180)
T ss_dssp EEEEEEECSS-SCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEECCC-CEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCC
Confidence 5667777754 68999887532 467999 9999999999999999999999994
No 52
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.31 E-value=2.5e-12 Score=104.64 Aligned_cols=50 Identities=22% Similarity=0.327 Sum_probs=41.8
Q ss_pred eEEEEEEeCCCCEEEEEEEeCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFA---RASWGFPKGKVNQDEPPMTCAIREVKIIFC 189 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~ecAiREv~EE~g 189 (192)
++++++++++ +|||+++++. ++.|+||||++++|||+.+||+||++||||
T Consensus 51 av~vl~~~~~--~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtG 103 (198)
T 1vhz_A 51 AVMIVPIVDD--HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVG 103 (198)
T ss_dssp EEEEEEEETT--EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHS
T ss_pred EEEEEEEECC--EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHC
Confidence 4555556754 9999987542 347999999999999999999999999998
No 53
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.31 E-value=3.6e-12 Score=108.96 Aligned_cols=58 Identities=31% Similarity=0.417 Sum_probs=49.4
Q ss_pred cccccceEEEEEEeCC----CCEEEEEEEeCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhc
Q psy13064 132 YKQSVPTFGAILIDKS----LTQVLLVQSFFA--RASWGFPKGKVNQDEPPMTCAIREVKIIFC 189 (192)
Q Consensus 132 Y~~~ip~~GaIi~n~~----~~kVLLVk~~~~--~~~W~fPkGkie~gEs~~ecAiREv~EE~g 189 (192)
|.++..++++|++..+ ..+|||+++... .+.|.||||+++.|||+.+||+||+.||||
T Consensus 35 ~~~p~v~v~~vv~~~~~~~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtG 98 (273)
T 2fml_A 35 YEKPSLTVDMVLLCYNKEADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETG 98 (273)
T ss_dssp CCCCEEEEEEEEEEEETTTTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHC
T ss_pred CCCCceEEEEEEEEEcCCCCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHC
Confidence 6777778888888633 348999988532 478999999999999999999999999999
No 54
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.30 E-value=3e-12 Score=102.03 Aligned_cols=52 Identities=17% Similarity=0.275 Sum_probs=44.5
Q ss_pred eEEEEEEeCCCCEEEEEEEeCC----CCcEEc-CceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFA----RASWGF-PKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~----~~~W~f-PkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++++++.+ +++||+++... .+.|.| |||+++.|||+.+||+||++||||=
T Consensus 34 ~v~~~i~~~~-g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl 90 (190)
T 1hzt_A 34 AFSSWLFNAK-GQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGV 90 (190)
T ss_dssp CEEEEEECTT-CCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEcCC-CEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCC
Confidence 5777888755 68999987532 578999 9999999999999999999999994
No 55
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.30 E-value=3.2e-12 Score=110.43 Aligned_cols=58 Identities=26% Similarity=0.323 Sum_probs=48.9
Q ss_pred hcccccceEEEEEEeCCCCEEEEEEEeCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 131 HYKQSVPTFGAILIDKSLTQVLLVQSFFA--RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 131 ~Y~~~ip~~GaIi~n~~~~kVLLVk~~~~--~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.|.+..+++++++.+ .++|||+++... ++.|+||||+++.|||+.+||+||++||||-
T Consensus 203 ~~~~~~~~v~~vv~~--~~~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl 262 (352)
T 2qjt_B 203 PFKPNFVTVDALVIV--NDHILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNI 262 (352)
T ss_dssp SSCCEEEEEEEEEEE--TTEEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred CCCCCceEEEEEEEE--CCEEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCC
Confidence 455666788888885 369999998542 4789999999999999999999999999994
No 56
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.30 E-value=2.5e-12 Score=107.49 Aligned_cols=59 Identities=17% Similarity=0.144 Sum_probs=48.2
Q ss_pred cccccceEEEEEEeCCCCEEEEEEEeC---C-------------------------------CCcEEcCceecCC-CCCH
Q psy13064 132 YKQSVPTFGAILIDKSLTQVLLVQSFF---A-------------------------------RASWGFPKGKVNQ-DEPP 176 (192)
Q Consensus 132 Y~~~ip~~GaIi~n~~~~kVLLVk~~~---~-------------------------------~~~W~fPkGkie~-gEs~ 176 (192)
+..+-+++++++++...+++|||++++ . ++.|+||+|+++. |||+
T Consensus 32 ~v~~~~aV~vl~~~~~~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs~ 111 (218)
T 3q91_A 32 FMKTHDSVTVLLFNSSRRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLSL 111 (218)
T ss_dssp ---CCCEEEEEEEEGGGTEEEEEEEECHHHHHHHTC-------------------------CCEEEECEEEECCSSSCCH
T ss_pred EEEcCCeEEEEEEECCCCEEEEEEccccccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCCCH
Confidence 334456788888997668999998764 1 4689999999999 9999
Q ss_pred HHHHHHHHHHHhcc
Q psy13064 177 MTCAIREVKIIFCQ 190 (192)
Q Consensus 177 ~ecAiREv~EE~g~ 190 (192)
.+||+||++||||=
T Consensus 112 ~eaA~REl~EEtGl 125 (218)
T 3q91_A 112 EEVACKEAWEECGY 125 (218)
T ss_dssp HHHHHHHHHHHHCB
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999994
No 57
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.29 E-value=3.5e-12 Score=101.79 Aligned_cols=54 Identities=20% Similarity=0.311 Sum_probs=43.2
Q ss_pred ceEEEEEEeCCCC-EEEEEEEeC----CCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 137 PTFGAILIDKSLT-QVLLVQSFF----ARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 137 p~~GaIi~n~~~~-kVLLVk~~~----~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
..+++|+++.+.+ +|||+++.. ..+.|+||||+++.|||+.+||+||++||||=
T Consensus 35 ~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl 93 (194)
T 1nqz_A 35 RAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVAL 93 (194)
T ss_dssp EEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred eEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCC
Confidence 3566666665422 899998743 35789999999999999999999999999984
No 58
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.28 E-value=2.8e-12 Score=99.82 Aligned_cols=54 Identities=17% Similarity=0.082 Sum_probs=45.1
Q ss_pred cceEEEEEEeCCCCEEEEEEEeCC----CCcEE-cCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 136 VPTFGAILIDKSLTQVLLVQSFFA----RASWG-FPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 136 ip~~GaIi~n~~~~kVLLVk~~~~----~~~W~-fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
.+++++++++.+ +++||+++... .+.|+ ||||+++.|||+.+||+||++||||-
T Consensus 34 ~~~v~v~i~~~~-~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl 92 (171)
T 1q27_A 34 VRVVNAFLRNSQ-GQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNV 92 (171)
T ss_dssp CEEEEEEEEETT-TEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSC
T ss_pred ceEEEEEEECCC-CeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCC
Confidence 345777778765 69999986421 57898 99999999999999999999999994
No 59
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.28 E-value=5.4e-12 Score=108.11 Aligned_cols=57 Identities=23% Similarity=0.275 Sum_probs=47.5
Q ss_pred cccccceEEEEEEeCCCCEEEEEEEeCC--CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 132 YKQSVPTFGAILIDKSLTQVLLVQSFFA--RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 132 Y~~~ip~~GaIi~n~~~~kVLLVk~~~~--~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
|.+..+++++|+++ .++|||+++... ++.|+||||+++.|||+.+||+||++||||-
T Consensus 199 ~~~~~~~v~~vi~~--~~~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl 257 (341)
T 2qjo_A 199 YAPTFITTDAVVVQ--AGHVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRL 257 (341)
T ss_dssp SCCCEEEEEEEEEE--TTEEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCC
T ss_pred CCCCceEEEEEEEe--CCEEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCC
Confidence 44555678888875 369999987532 5789999999999999999999999999994
No 60
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.28 E-value=4.3e-12 Score=106.62 Aligned_cols=60 Identities=27% Similarity=0.395 Sum_probs=46.7
Q ss_pred hcccccceEEEEEE--eCCCCEEEEEEEeC--CCCcEEcCceecCC--CCCHHHHHHHHHHHHhcc
Q psy13064 131 HYKQSVPTFGAILI--DKSLTQVLLVQSFF--ARASWGFPKGKVNQ--DEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 131 ~Y~~~ip~~GaIi~--n~~~~kVLLVk~~~--~~~~W~fPkGkie~--gEs~~ecAiREv~EE~g~ 190 (192)
.|.++..++++||+ +++..+|||+++.. ..|.|++|||+++. |||+.+||+||++||||-
T Consensus 17 ~~~~p~v~v~~vi~~~~~~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl 82 (240)
T 3gz5_A 17 AFKAQLLTVDAVLFTYHDQQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAV 82 (240)
T ss_dssp ----CEEEEEEEEEEEETTEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSS
T ss_pred ccCCCccEEEEEEEEEeCCCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCC
Confidence 35555567778887 44446999998753 25789999999999 999999999999999995
No 61
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.27 E-value=4.3e-12 Score=103.34 Aligned_cols=55 Identities=22% Similarity=0.399 Sum_probs=45.2
Q ss_pred ccceEEEEEEeCCCCEEEEEEEeCC---CCcEEcCceecC-CCCCHHHHHHHHHHHHhcc
Q psy13064 135 SVPTFGAILIDKSLTQVLLVQSFFA---RASWGFPKGKVN-QDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 135 ~ip~~GaIi~n~~~~kVLLVk~~~~---~~~W~fPkGkie-~gEs~~ecAiREv~EE~g~ 190 (192)
...++++++++. .+++||+++++. ++.|+||||+++ .|||+.+||+||++||||-
T Consensus 42 ~~~av~v~i~~~-~~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl 100 (207)
T 1mk1_A 42 HFGAVAIVAMDD-NGNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGL 100 (207)
T ss_dssp ECCEEEEEECCT-TSEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCE
T ss_pred CCCEEEEEEEcC-CCEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCC
Confidence 334666777775 479999987642 458999999999 9999999999999999993
No 62
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.22 E-value=1.6e-11 Score=100.25 Aligned_cols=53 Identities=23% Similarity=0.330 Sum_probs=41.4
Q ss_pred eEEEEEEeCC---CCEEEEEEEeCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKS---LTQVLLVQSFFA---RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~---~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+++++.+..+ .+++||+++++. ++.|+||+|+++.||++.+||+||++||||=
T Consensus 63 av~v~~v~~~~~~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl 121 (212)
T 2dsc_A 63 GVAVIPVLQRTLHYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGY 121 (212)
T ss_dssp EEEEEEEEECTTSCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred EEEEEEEEeCCCCCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCC
Confidence 4444444322 358999987542 3579999999999999999999999999994
No 63
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.20 E-value=1.9e-11 Score=105.19 Aligned_cols=93 Identities=16% Similarity=0.053 Sum_probs=64.2
Q ss_pred hHHHHhhhccccccccceeeeccchhhhhHhhhhhhhhhh--hhhhcccccceEEEEEEeCCCCEEEEEEEeC-CCCcEE
Q psy13064 88 TVLDDWRHYKQSVPTFGAILIDKSLTQVLLFLRQGLTVLD--DWRHYKQSVPTFGAILIDKSLTQVLLVQSFF-ARASWG 164 (192)
Q Consensus 88 ~~~~~~~~y~~~vp~~~~i~~~~~~~~~~~v~~~~~~~l~--~~~~Y~~~ip~~GaIi~n~~~~kVLLVk~~~-~~~~W~ 164 (192)
..+..|.+-.+-.|.||+-.....-... ..+. .+..|.+..|++.+++.+ .++|||+++.. ..|.|+
T Consensus 98 ~~l~~w~~~~~fC~~CG~~~~~~~~~~~--------~~C~~C~~~~yp~~~~~viv~v~~--~~~vLL~rr~~~~~g~w~ 167 (269)
T 1vk6_A 98 VQLAEFYRSHKYCGYCGHEMYPSKTEWA--------MLCSHCRERYYPQIAPCIIVAIRR--DDSILLAQHTRHRNGVHT 167 (269)
T ss_dssp HHHHHHHHTTSBCTTTCCBEEECSSSSC--------EEESSSSCEECCCCEEEEEEEEEE--TTEEEEEEETTTCSSCCB
T ss_pred HHHHhhhhcCCccccCCCcCccCCCcee--------eeCCCCCCEecCCCCcEEEEEEEe--CCEEEEEEecCCCCCcEE
Confidence 4567787777777887755432111000 0111 233576666665555544 36999999753 357899
Q ss_pred cCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 165 FPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 165 fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+|+|+++.|||+.+||+||++||||=
T Consensus 168 lPgG~vE~GEt~eeAa~REv~EEtGl 193 (269)
T 1vk6_A 168 VLAGFVEVGETLEQAVAREVMEESGI 193 (269)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred CCcCcCCCCCCHHHHHHHHHHHHhCc
Confidence 99999999999999999999999984
No 64
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.16 E-value=2.7e-11 Score=93.03 Aligned_cols=52 Identities=21% Similarity=0.241 Sum_probs=42.1
Q ss_pred eEEEEEEeCC--CCEEEEEEEeCC---CCcEEcCceecCCCCCHH-HHHHHHHHHHhc
Q psy13064 138 TFGAILIDKS--LTQVLLVQSFFA---RASWGFPKGKVNQDEPPM-TCAIREVKIIFC 189 (192)
Q Consensus 138 ~~GaIi~n~~--~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~-ecAiREv~EE~g 189 (192)
.+.+|+.+.. .++|||+|+... +|.|+||+|+++.||++. +||+||+.||||
T Consensus 21 ~~~~vi~~~~~~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g 78 (155)
T 1x51_A 21 SATCVLEQPGALGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAG 78 (155)
T ss_dssp EEEEEEEEECSSSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSC
T ss_pred EEEEEEEecCCCCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhC
Confidence 4555666642 468999987532 478999999999999996 999999999999
No 65
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.12 E-value=9e-11 Score=98.85 Aligned_cols=64 Identities=19% Similarity=0.292 Sum_probs=54.7
Q ss_pred hhhhhhhhcccccceEEEEEEeCC-CCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhc
Q psy13064 124 TVLDDWRHYKQSVPTFGAILIDKS-LTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFC 189 (192)
Q Consensus 124 ~~l~~~~~Y~~~ip~~GaIi~n~~-~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g 189 (192)
.+...+.+|..++.++|+|+.++. ..+|||+|.. .+.|.+|||+++.||++.+|.+||+.||+|
T Consensus 47 rl~~~y~~~g~R~sV~avil~~~~~~phVLLlq~~--~~~f~LPGGkle~gE~~~eaL~REL~EELg 111 (208)
T 3bho_A 47 RMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLG--TTFFKLPGGELNPGEDEVEGLKRLMTEILG 111 (208)
T ss_dssp HHHHHHHHHCSEEEEEEEEEEEETTEEEEEEEEEE--TTEEECSEEECCTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhCCceEEEEEEEEcCCCCcEEEEEEcC--CCcEECCCcccCCCCCHHHHHHHHHHHHhC
Confidence 455567778888888999988765 3589999973 568999999999999999999999999999
No 66
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.10 E-value=3.8e-11 Score=98.66 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=36.3
Q ss_pred CEEEEEEEeCCCCcEEcCceecCCCC-CHHHHHHHHHHHHhcc
Q psy13064 149 TQVLLVQSFFARASWGFPKGKVNQDE-PPMTCAIREVKIIFCQ 190 (192)
Q Consensus 149 ~kVLLVk~~~~~~~W~fPkGkie~gE-s~~ecAiREv~EE~g~ 190 (192)
+++||+++ ..+.|+||||+++.|| |+.+||+||++||||-
T Consensus 56 ~~vLl~~r--~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl 96 (212)
T 1u20_A 56 RVLLMMMR--FDGRLGFPGGFVDTRDISLEEGLKRELEEELGP 96 (212)
T ss_dssp EEEEEEEE--TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCG
T ss_pred CEEEEEEe--CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCC
Confidence 58888887 3688999999999999 9999999999999994
No 67
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.07 E-value=6.8e-11 Score=99.21 Aligned_cols=49 Identities=18% Similarity=0.230 Sum_probs=37.0
Q ss_pred EEEEEEeCCCCEEEEEEEeCCC------CcEEc-CceecCCCCC--H----HHHHHHHHHHHhc
Q psy13064 139 FGAILIDKSLTQVLLVQSFFAR------ASWGF-PKGKVNQDEP--P----MTCAIREVKIIFC 189 (192)
Q Consensus 139 ~GaIi~n~~~~kVLLVk~~~~~------~~W~f-PkGkie~gEs--~----~ecAiREv~EE~g 189 (192)
..||+.+ .+++||+++...+ +.|+| ||||++.||| + .+||+||++||||
T Consensus 71 ~~~II~~--~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtG 132 (211)
T 3e57_A 71 PYVVIMD--GDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVD 132 (211)
T ss_dssp EEEEEEE--TTEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEE
T ss_pred EEEEEEE--CCEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhC
Confidence 3455544 3699999875332 57999 9999999999 5 9999999999998
No 68
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.04 E-value=1.2e-10 Score=102.44 Aligned_cols=44 Identities=27% Similarity=0.415 Sum_probs=39.1
Q ss_pred CCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 146 KSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 146 ~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++..+|||+++. ..+.|+||||+++.|||+.+||+||++||||=
T Consensus 35 ~~~~~vLLv~r~-~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl 78 (364)
T 3fjy_A 35 LDSIEVCIVHRP-KYDDWSWPKGKLEQNETHRHAAVREIGEETGS 78 (364)
T ss_dssp HTTEEEEEEEET-TTTEEECCEEECCTTCCHHHHHHHHHHHHHSC
T ss_pred CCceEEEEEEcC-CCCCEECCcCCCCCCCCHHHHHHHHHHHHhCC
Confidence 345699999984 45899999999999999999999999999994
No 69
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.99 E-value=6.4e-10 Score=96.29 Aligned_cols=40 Identities=20% Similarity=0.253 Sum_probs=36.6
Q ss_pred EEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 150 QVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 150 kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
+|||+++. ..+.|.+|||+++.||++.+||+||++||||-
T Consensus 140 ~vLl~~r~-~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl 179 (292)
T 1q33_A 140 QFVAIKRK-DCGEWAIPGGMVDPGEKISATLKREFGEEALN 179 (292)
T ss_dssp EEEEEECT-TTCSEECCCEECCTTCCHHHHHHHHHHHHHSC
T ss_pred EEEEEEec-CCCcEeCCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 69999885 45799999999999999999999999999993
No 70
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.95 E-value=4.2e-10 Score=95.20 Aligned_cols=56 Identities=18% Similarity=0.194 Sum_probs=45.6
Q ss_pred ccceEEEEEEeCCC---CEEEEEEEeCC----CCcEEcCceecCCCCCH--------------------HHHHHHHHHHH
Q psy13064 135 SVPTFGAILIDKSL---TQVLLVQSFFA----RASWGFPKGKVNQDEPP--------------------MTCAIREVKII 187 (192)
Q Consensus 135 ~ip~~GaIi~n~~~---~kVLLVk~~~~----~~~W~fPkGkie~gEs~--------------------~ecAiREv~EE 187 (192)
..+.+++|++++.. .+|||+|+... .|.|.||||+++.||+. ..||+||++||
T Consensus 7 ~r~aA~lill~~~~~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE 86 (232)
T 3qsj_A 7 IRKAATLVVIRDGANKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEE 86 (232)
T ss_dssp EEEEEEEEEEEECGGGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEEEcCCCCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHH
Confidence 45667888887642 38999987542 47899999999999984 89999999999
Q ss_pred hcc
Q psy13064 188 FCQ 190 (192)
Q Consensus 188 ~g~ 190 (192)
+|-
T Consensus 87 ~Gl 89 (232)
T 3qsj_A 87 IGW 89 (232)
T ss_dssp HSC
T ss_pred hCc
Confidence 994
No 71
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.90 E-value=6.5e-10 Score=92.48 Aligned_cols=39 Identities=23% Similarity=0.387 Sum_probs=33.7
Q ss_pred EEEEEEEeCCCCcEEcCceecCCCC-CHHHHHHHHHHHHhcc
Q psy13064 150 QVLLVQSFFARASWGFPKGKVNQDE-PPMTCAIREVKIIFCQ 190 (192)
Q Consensus 150 kVLLVk~~~~~~~W~fPkGkie~gE-s~~ecAiREv~EE~g~ 190 (192)
++||..+. .+.|+||||+++.|| |+.+||+||++||||=
T Consensus 66 ~~ll~~r~--~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl 105 (217)
T 2xsq_A 66 AILMQMRF--DGRLGFPGGFVDTQDRSLEDGLNRELREELGE 105 (217)
T ss_dssp EEEEEEET--TSCEECSEEECCTTCSSHHHHHHHHHHHHHCG
T ss_pred cEEEEEcc--CCeEECCceecCCCCCCHHHHHHHHHHHHHCC
Confidence 46665553 578999999999999 9999999999999983
No 72
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.84 E-value=2.3e-09 Score=95.20 Aligned_cols=51 Identities=18% Similarity=0.158 Sum_probs=42.6
Q ss_pred eEEEEEEeCCCCEEEEEEEeCC---CCcEEcCceecCCCCCHHHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFFA---RASWGFPKGKVNQDEPPMTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~~---~~~W~fPkGkie~gEs~~ecAiREv~EE~g~ 190 (192)
++++|+.|.+ ++|||+|+... +|.|+||||+++.| |+.+||+||+.||+|-
T Consensus 242 ~~~~vi~~~~-g~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl 295 (369)
T 3fsp_A 242 LAVAVLADDE-GRVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGL 295 (369)
T ss_dssp EEEEEEECSS-SEEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSC
T ss_pred EEEEEEEeCC-CEEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCC
Confidence 5666776654 79999987532 47899999999999 9999999999999983
No 73
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=98.66 E-value=3.2e-08 Score=83.19 Aligned_cols=52 Identities=15% Similarity=0.120 Sum_probs=41.8
Q ss_pred eEEEEEEeCCCCEEEEEEEeC----CCCcEEcCc-eecCCC------CCH---HHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFF----ARASWGFPK-GKVNQD------EPP---MTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~----~~~~W~fPk-Gkie~g------Es~---~ecAiREv~EE~g~ 190 (192)
+++++++|.+ +++||.|+.. ..|.|.+|. |+++.| |++ .+||+||++||||=
T Consensus 61 av~v~v~~~~-g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi 126 (235)
T 2dho_A 61 AFSVFLFNTE-NKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGI 126 (235)
T ss_dssp EEEEEEECTT-CCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCC
T ss_pred EEEEEEEcCC-CEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCC
Confidence 4666777755 6899987743 246899995 999999 885 99999999999994
No 74
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=98.64 E-value=2.9e-08 Score=84.14 Aligned_cols=52 Identities=12% Similarity=0.097 Sum_probs=42.3
Q ss_pred eEEEEEEeCCCCEEEEEEEeC----CCCcEEcCc-eecCCC------CCH---HHHHHHHHHHHhcc
Q psy13064 138 TFGAILIDKSLTQVLLVQSFF----ARASWGFPK-GKVNQD------EPP---MTCAIREVKIIFCQ 190 (192)
Q Consensus 138 ~~GaIi~n~~~~kVLLVk~~~----~~~~W~fPk-Gkie~g------Es~---~ecAiREv~EE~g~ 190 (192)
+++++++|.+ +++||.|+.. ..|.|.+|. |+++.| |++ .+||+||++||||=
T Consensus 72 av~v~v~~~~-g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi 137 (246)
T 2pny_A 72 AFSVVLFNTK-NRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGI 137 (246)
T ss_dssp EEEEEEECTT-CCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCC
T ss_pred EEEEEEEeCC-CEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCC
Confidence 5667777755 6899988743 246899996 999999 897 99999999999994
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.61 E-value=1.3e-08 Score=85.63 Aligned_cols=37 Identities=22% Similarity=0.171 Sum_probs=31.9
Q ss_pred EEEEEeCCCCcEEcCceecCCCC-CHHHHHHHHHHHHhc
Q psy13064 152 LLVQSFFARASWGFPKGKVNQDE-PPMTCAIREVKIIFC 189 (192)
Q Consensus 152 LLVk~~~~~~~W~fPkGkie~gE-s~~ecAiREv~EE~g 189 (192)
+|+|.. .+|.|+|||||||.|| |+++|.+||+.||+|
T Consensus 46 iLmQ~R-~~G~weFPGGkVe~gE~t~e~aL~REl~EElg 83 (214)
T 3kvh_A 46 VLMQMR-FDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLG 83 (214)
T ss_dssp EEEEEE-TTSCEECSEEEECTTTCCHHHHHHHSCCSCC-
T ss_pred EEEeee-eCCEEeCCCccCCCCCCCHHHHHHHHHHHhhC
Confidence 555554 4689999999999999 999999999999998
No 76
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.22 E-value=7.4e-07 Score=78.59 Aligned_cols=47 Identities=15% Similarity=0.151 Sum_probs=35.9
Q ss_pred cceEEEEEEeCCCCEEEEEEEeCCCCcEEcCceecCCCCCHHHHHHHHHHHHh-cc
Q psy13064 136 VPTFGAILIDKSLTQVLLVQSFFARASWGFPKGKVNQDEPPMTCAIREVKIIF-CQ 190 (192)
Q Consensus 136 ip~~GaIi~n~~~~kVLLVk~~~~~~~W~fPkGkie~gEs~~ecAiREv~EE~-g~ 190 (192)
...+|||+.++ ++|||+ . ..| |++|||.++. +..++|+||++||+ |-
T Consensus 183 ~~~vgaii~~~--g~vLL~-~--~~G-W~LPG~~~~~--~~~~~a~RE~~EEttGl 230 (321)
T 3rh7_A 183 EIRLGAVLEQQ--GAVFLA-G--NET-LSLPNCTVEG--GDPARTLAAYLEQLTGL 230 (321)
T ss_dssp CEEEEEEEESS--SCEEEB-C--SSE-EBCCEEEESS--SCHHHHHHHHHHHHHSS
T ss_pred cceEEEEEEEC--CEEEEe-e--CCC-ccCCcccCCC--ChhHHHHHHHHHHhcCC
Confidence 34688888774 689999 3 456 9999886654 44469999999997 84
No 77
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=98.19 E-value=3e-06 Score=74.28 Aligned_cols=49 Identities=10% Similarity=-0.152 Sum_probs=38.8
Q ss_pred EEEEeCCC--CEEEEEEEeC----CCCcE-EcCceecCCCCCHHHHHHHHHHHHhc
Q psy13064 141 AILIDKSL--TQVLLVQSFF----ARASW-GFPKGKVNQDEPPMTCAIREVKIIFC 189 (192)
Q Consensus 141 aIi~n~~~--~kVLLVk~~~----~~~~W-~fPkGkie~gEs~~ecAiREv~EE~g 189 (192)
+.+++.+. .++++.|+.. ..|.| .+|+|+++.|||+.+||+||+.||+|
T Consensus 123 ~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElG 178 (300)
T 3dup_A 123 LNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEAD 178 (300)
T ss_dssp EEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHC
T ss_pred EEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhC
Confidence 34455542 2788877643 25789 69999999999999999999999999
No 78
>3fxt_A Nucleoside diphosphate-linked moiety X motif 6; nudix, NUDT6, GFG, FGF2AS, antisense basic fibroblast growth FGF-2 regulation, hydrolase; 2.30A {Homo sapiens}
Probab=96.49 E-value=0.00067 Score=52.05 Aligned_cols=40 Identities=15% Similarity=0.348 Sum_probs=33.6
Q ss_pred hhhHHHHhhhccccccccceeeeccchhhhhHh--------hhh----hhhhhhhhh
Q psy13064 86 IDTVLDDWRHYKQSVPTFGAILIDKSLTQVLLF--------LRQ----GLTVLDDWR 130 (192)
Q Consensus 86 ~~~~~~~~~~y~~~vp~~~~i~~~~~~~~~~~v--------~~~----~~~~l~~~~ 130 (192)
+++++++||+-++ +||||+++.+++.+| .|| +|.||.+|+
T Consensus 57 L~~SL~~Wr~~gk-----~~IWlklpi~~s~lIp~a~~~GF~fHHAe~dylmL~~WL 108 (113)
T 3fxt_A 57 LQAAVQQWRSEGR-----TAVWLHIPILQSRFIAPAASLGFCFHHAESDSSTLTLWL 108 (113)
T ss_dssp HHHHHHHHHHTTC-----CEEEEEEEGGGGGGHHHHHHTTCEEEEEEBTEEEEEEEC
T ss_pred HHHHHHHHHHcCC-----eeEEEEcCHHHhhhHHHHHHcCceeecCCCCeEEEEEec
Confidence 3688999999988 899999999999887 555 777777776
No 79
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=23.60 E-value=37 Score=22.42 Aligned_cols=14 Identities=29% Similarity=0.259 Sum_probs=10.3
Q ss_pred CCHHHHHHHHHHHH
Q psy13064 174 EPPMTCAIREVKII 187 (192)
Q Consensus 174 Es~~ecAiREv~EE 187 (192)
+|..-.|+|||+|-
T Consensus 38 qSdF~~aVREVYEh 51 (53)
T 1zl8_A 38 QSEFFGAVREVYET 51 (53)
T ss_dssp SCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45566788888884
No 80
>3gcg_B MAP, L0028 (mitochondria associated protein); CDC42, complex, alternative splicing, cell membrane, GTP-binding, lipoprotein, membrane; 2.30A {Escherichia coli}
Probab=20.80 E-value=46 Score=26.93 Aligned_cols=59 Identities=24% Similarity=0.082 Sum_probs=41.9
Q ss_pred HHHhhhhhhcccCCcccccchhHHHHHHhhhhhhhhhcccccCccCcc--cCHHHHHHHHHhhCC
Q psy13064 15 ILDDLSSRFVINIPHEERGDVIRICFQMELAYWFYLDFYCTQDESLFK--AGLKEFFFQMFHHIP 77 (192)
Q Consensus 15 ilddl~~RFiiN~P~ee~~~~~rl~fqie~A~WfY~Df~~~~~~~lp~--~~~~~F~~~lf~~~p 77 (192)
.+|+.|.+.=.++|.+++ .|||.+||.++=+++|--+-+. +.-. ++-+.|.+.|=..|.
T Consensus 59 ~ID~~c~~n~~~Is~e~K---~rIF~~Ie~~~~~~LD~naAQS-SI~H~l~~n~~f~kK~d~Lc~ 119 (172)
T 3gcg_B 59 TLDDYCRSNNSVISKETK---GHIFRAVENALQQPLDMNGAQS-SIGHFLQSNKYFNQKVDEQCG 119 (172)
T ss_dssp HHHHHHHHHTCCCCHHHH---HHHHHHHHHHHTCCCCTTCCCC-HHHHHHHTCHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCcCCHHHH---HHHHHHHHHHhCCccChhhhhh-hHHHHHhccHHHHHHHHHHHh
Confidence 469999999999999977 5999999999988888664442 1111 244456666555444
Done!