Query psy13065
Match_columns 114
No_of_seqs 109 out of 861
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 18:33:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13065.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13065hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jvb_A Protein PSU1, mRNA-deca 99.6 1.9E-16 6.3E-21 107.8 5.5 99 2-111 37-135 (146)
2 2a6t_A SPAC19A8.12; alpha/beta 99.6 7.7E-16 2.6E-20 117.1 7.3 103 2-111 135-237 (271)
3 3i7u_A AP4A hydrolase; nudix p 99.4 3.2E-13 1.1E-17 92.0 4.9 75 2-80 34-113 (134)
4 3gg6_A Nudix motif 18, nucleos 99.3 1.1E-11 3.9E-16 84.8 9.0 79 2-82 55-133 (156)
5 4dyw_A MUTT/nudix family prote 99.3 1.6E-11 5.4E-16 84.9 8.6 83 2-86 63-148 (157)
6 2yyh_A MUTT domain, 8-OXO-DGTP 99.3 1.2E-11 4.2E-16 83.2 6.7 76 2-82 46-126 (139)
7 3shd_A Phosphatase NUDJ; nudix 99.2 1.7E-11 5.9E-16 83.5 6.1 73 2-76 38-112 (153)
8 3u53_A BIS(5'-nucleosyl)-tetra 99.2 1.5E-11 5.1E-16 84.7 5.4 77 2-80 45-126 (155)
9 3q1p_A Phosphohydrolase (MUTT/ 99.2 2.6E-11 8.7E-16 87.8 6.5 78 2-82 99-181 (205)
10 3eds_A MUTT/nudix family prote 99.2 5.2E-11 1.8E-15 81.8 7.5 78 2-82 52-138 (153)
11 3f6a_A Hydrolase, nudix family 99.2 1.1E-10 3.7E-15 80.4 8.4 76 2-80 37-134 (159)
12 2pqv_A MUTT/nudix family prote 99.2 4.1E-11 1.4E-15 81.9 6.0 78 2-80 48-130 (154)
13 3o8s_A Nudix hydrolase, ADP-ri 99.1 7.5E-11 2.6E-15 85.4 6.9 78 2-82 100-182 (206)
14 3id9_A MUTT/nudix family prote 99.1 7.1E-11 2.4E-15 82.1 6.4 77 2-80 55-136 (171)
15 1sjy_A MUTT/nudix family prote 99.1 3.7E-11 1.3E-15 82.0 4.9 79 2-81 52-132 (159)
16 3grn_A MUTT related protein; s 99.1 6.3E-11 2.1E-15 81.0 5.9 73 2-80 45-120 (153)
17 1vcd_A NDX1; nudix protein, di 99.1 5.4E-11 1.9E-15 78.3 5.0 74 2-80 33-108 (126)
18 3gwy_A Putative CTP pyrophosph 99.1 9.7E-11 3.3E-15 78.9 6.4 74 2-82 43-119 (140)
19 2w4e_A MUTT/nudix family prote 99.1 1.4E-11 4.7E-16 84.2 2.0 78 2-81 41-119 (145)
20 3h95_A Nucleoside diphosphate- 99.1 1.6E-11 5.5E-16 88.2 2.4 77 2-80 61-141 (199)
21 3oga_A Nucleoside triphosphata 99.1 9.1E-11 3.1E-15 81.1 5.7 76 2-81 64-151 (165)
22 3exq_A Nudix family hydrolase; 99.1 2E-10 6.7E-15 79.6 7.4 75 2-81 46-123 (161)
23 2b0v_A Nudix hydrolase; struct 99.1 5.6E-11 1.9E-15 80.6 4.3 76 2-79 42-120 (153)
24 3i9x_A MUTT/nudix family prote 99.1 8.6E-12 2.9E-16 88.6 0.1 77 2-79 76-155 (187)
25 2fb1_A Conserved hypothetical 99.1 7.4E-11 2.5E-15 87.0 4.9 79 2-83 51-132 (226)
26 1ktg_A Diadenosine tetraphosph 99.1 1.1E-10 3.7E-15 78.0 5.2 76 2-80 39-119 (138)
27 3fk9_A Mutator MUTT protein; s 99.1 1.5E-10 5.2E-15 82.7 6.2 75 2-80 35-115 (188)
28 1f3y_A Diadenosine 5',5'''-P1, 99.1 4.7E-11 1.6E-15 81.7 3.4 81 2-82 47-148 (165)
29 3cng_A Nudix hydrolase; struct 99.1 5E-10 1.7E-14 79.7 8.9 74 2-82 74-151 (189)
30 2b06_A MUTT/nudix family prote 99.1 1.2E-10 4.2E-15 79.4 5.4 74 2-81 45-121 (155)
31 1vk6_A NADH pyrophosphatase; 1 99.1 4.1E-10 1.4E-14 85.6 8.8 76 2-81 173-248 (269)
32 3f13_A Putative nudix hydrolas 99.1 4.7E-10 1.6E-14 78.8 8.5 73 2-82 46-118 (163)
33 2fkb_A Putative nudix hydrolas 99.1 1.1E-10 3.8E-15 81.7 5.0 75 2-80 75-150 (180)
34 2pbt_A AP4A hydrolase; nudix p 99.1 7.8E-11 2.7E-15 78.2 3.9 75 2-80 34-113 (134)
35 3hhj_A Mutator MUTT protein; n 99.1 4.4E-10 1.5E-14 77.1 7.8 75 2-81 65-142 (158)
36 1vhz_A ADP compounds hydrolase 99.1 2.3E-10 7.7E-15 82.6 6.6 78 2-81 84-162 (198)
37 3son_A Hypothetical nudix hydr 99.1 3.4E-11 1.2E-15 81.9 2.0 77 2-80 40-125 (149)
38 3r03_A Nudix hydrolase; struct 99.1 4.5E-10 1.5E-14 75.4 7.6 75 2-81 44-121 (144)
39 3q93_A 7,8-dihydro-8-oxoguanin 99.0 7.7E-10 2.6E-14 78.0 8.3 74 2-80 59-135 (176)
40 3ees_A Probable pyrophosphohyd 99.0 4.4E-10 1.5E-14 75.9 6.6 73 2-81 57-132 (153)
41 2yvp_A NDX2, MUTT/nudix family 99.0 7.7E-11 2.6E-15 82.9 2.6 79 2-81 77-156 (182)
42 1mut_A MUTT, nucleoside tripho 99.0 4.2E-10 1.4E-14 74.0 5.3 73 2-81 40-115 (129)
43 1nqz_A COA pyrophosphatase (MU 99.0 9.4E-11 3.2E-15 83.3 2.2 78 2-81 73-153 (194)
44 1q27_A Putative nudix hydrolas 99.0 1.8E-10 6.2E-15 80.0 3.5 75 2-80 72-149 (171)
45 2kdv_A RNA pyrophosphohydrolas 99.0 9.5E-10 3.3E-14 76.8 6.8 78 2-79 40-135 (164)
46 2rrk_A ORF135, CTP pyrophospho 99.0 5.1E-10 1.7E-14 74.7 5.0 73 2-81 44-119 (140)
47 3o6z_A GDP-mannose pyrophospha 99.0 3.7E-10 1.3E-14 80.9 4.6 79 2-81 88-168 (191)
48 2dsc_A ADP-sugar pyrophosphata 99.0 6.1E-10 2.1E-14 80.8 5.8 80 2-82 101-186 (212)
49 3q91_A Uridine diphosphate glu 99.0 6.6E-10 2.3E-14 82.0 5.8 80 2-81 104-190 (218)
50 1mk1_A ADPR pyrophosphatase; n 99.0 1.3E-10 4.5E-15 84.1 1.7 80 2-81 79-160 (207)
51 1g0s_A Hypothetical 23.7 kDa p 99.0 1.9E-10 6.6E-15 83.6 2.5 80 2-81 99-181 (209)
52 2azw_A MUTT/nudix family prote 99.0 4.9E-10 1.7E-14 75.4 4.3 75 2-80 50-131 (148)
53 3fcm_A Hydrolase, nudix family 98.9 1E-09 3.5E-14 78.4 5.5 78 2-81 78-169 (197)
54 1v8y_A ADP-ribose pyrophosphat 98.9 1.7E-10 6E-15 80.4 1.3 77 2-81 69-146 (170)
55 1hzt_A Isopentenyl diphosphate 98.9 8.3E-10 2.8E-14 78.3 4.5 75 2-80 70-151 (190)
56 2fvv_A Diphosphoinositol polyp 98.9 2.5E-10 8.5E-15 82.3 1.3 77 2-80 75-151 (194)
57 2o1c_A DATP pyrophosphohydrola 98.9 3.9E-10 1.3E-14 75.8 2.1 75 2-80 43-133 (150)
58 3fjy_A Probable MUTT1 protein; 98.9 7.1E-10 2.4E-14 86.4 3.7 80 2-81 58-160 (364)
59 1rya_A GDP-mannose mannosyl hy 98.9 1.1E-09 3.6E-14 74.8 3.8 75 2-79 53-138 (160)
60 2qjt_B Nicotinamide-nucleotide 98.9 1.6E-09 5.5E-14 83.2 4.2 78 2-79 242-329 (352)
61 1k2e_A Nudix homolog; nudix/MU 98.8 3E-09 1E-13 73.1 4.4 25 2-26 32-56 (156)
62 2qjo_A Bifunctional NMN adenyl 98.8 1.6E-09 5.4E-14 82.6 3.2 77 2-79 237-322 (341)
63 3gz5_A MUTT/nudix family prote 98.8 9.9E-10 3.4E-14 81.7 1.4 71 5-78 65-138 (240)
64 2fml_A MUTT/nudix family prote 98.8 5.1E-09 1.8E-13 79.1 5.0 72 2-77 79-155 (273)
65 1q33_A Pyrophosphatase, ADP-ri 98.7 3.1E-08 1.1E-12 75.7 7.6 82 2-83 159-266 (292)
66 3e57_A Uncharacterized protein 98.7 1.1E-09 3.7E-14 81.0 -0.8 74 2-80 107-189 (211)
67 1u20_A U8 snoRNA-binding prote 98.7 1.5E-08 5.1E-13 73.7 5.1 78 2-79 75-165 (212)
68 2xsq_A U8 snoRNA-decapping enz 98.6 3E-08 1E-12 72.9 5.3 77 2-78 84-172 (217)
69 1x51_A A/G-specific adenine DN 98.5 5.5E-08 1.9E-12 66.4 2.7 71 3-80 59-134 (155)
70 2pny_A Isopentenyl-diphosphate 98.4 3.5E-07 1.2E-11 68.4 4.5 72 6-81 118-203 (246)
71 2dho_A Isopentenyl-diphosphate 98.3 4.1E-07 1.4E-11 67.5 4.7 72 6-81 107-192 (235)
72 3dup_A MUTT/nudix family prote 98.3 4.8E-07 1.6E-11 69.9 4.9 77 3-81 160-244 (300)
73 3fsp_A A/G-specific adenine gl 98.3 7.7E-07 2.6E-11 69.8 6.0 70 3-81 277-347 (369)
74 3rh7_A Hypothetical oxidoreduc 98.1 1.6E-06 5.6E-11 67.3 4.2 64 4-80 211-277 (321)
75 3qsj_A Nudix hydrolase; struct 97.5 0.00011 3.8E-09 54.5 4.9 18 8-25 75-92 (232)
76 3kvh_A Protein syndesmos; NUDT 95.9 0.0052 1.8E-07 45.2 3.0 24 2-25 63-88 (214)
77 3bho_A Cleavage and polyadenyl 90.5 0.15 5.1E-06 37.4 2.6 21 2-22 92-112 (208)
78 1zl8_A LIN-7; heterodimer, alp 48.2 8.2 0.00028 22.0 1.4 14 6-19 38-51 (53)
79 1vig_A Vigilin; RNA-binding pr 30.8 25 0.00084 20.4 1.7 14 12-25 26-39 (71)
80 2lic_A Vitellogenin; lipid tra 26.9 27 0.00094 17.7 1.2 29 75-103 6-34 (35)
81 2ctk_A Vigilin; K homology typ 22.3 41 0.0014 21.1 1.7 16 11-26 37-52 (104)
82 2opv_A KHSRP protein; KH domai 21.0 46 0.0016 19.8 1.7 16 11-26 34-49 (85)
No 1
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.64 E-value=1.9e-16 Score=107.75 Aligned_cols=99 Identities=23% Similarity=0.488 Sum_probs=74.1
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCch
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSRK 81 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~~ 81 (114)
++..||+.+||+||++||||+++..+.....|......+...++|++..+.......+...+|+.++.|+++++++.+..
T Consensus 37 ve~gEs~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 116 (146)
T 2jvb_A 37 ISKDENDIDCCIREVKEEIGFDLTDYIDDNQFIERNIQGKNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMY 116 (146)
T ss_dssp CCSSSCHHHHHHHHHHHHTSCCCSSSSCSSCEEEEEETTEEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGG
T ss_pred CCCCCCHHHHHHHHHHHHHCCCchHhcccccccccccCCceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhc
Confidence 56789999999999999999999865544455443344555666666554433334455568999999999999998664
Q ss_pred hhhhhhccCCCCCCCceEEEccchHhHHhh
Q psy13065 82 EIKTVLINGTPVGTNAFFMIMPFINSINIA 111 (114)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (114)
....+++|+.||+..|+=|
T Consensus 117 -----------~~~~~~~l~~~~~~~l~~~ 135 (146)
T 2jvb_A 117 -----------KSNIKYYLINSMMRPLSMW 135 (146)
T ss_dssp -----------CSSCCCHHHHHHHHHHHHH
T ss_pred -----------ccchhhhhHHHHHHHHHHH
Confidence 4567899999999998765
No 2
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.61 E-value=7.7e-16 Score=117.09 Aligned_cols=103 Identities=32% Similarity=0.629 Sum_probs=71.7
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCch
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSRK 81 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~~ 81 (114)
.+..||+.+||+||++||||+++..+.....|......++.+++|++...+.+..+.+...+|+.+++|+++++++.+..
T Consensus 135 ve~gEs~~eAA~REl~EEtGl~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 214 (271)
T 2a6t_A 135 IDKDESDVDCAIREVYEETGFDCSSRINPNEFIDMTIRGQNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKK 214 (271)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCCTTTCCTTCEEEEEETTEEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC-
T ss_pred CCCCcCHHHHHHHHHHHHhCCCceeeeeeeeeccCCcCCceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHh
Confidence 57889999999999999999999876554455543334566777887765543333444568999999999999998765
Q ss_pred hhhhhhccCCCCCCCceEEEccchHhHHhh
Q psy13065 82 EIKTVLINGTPVGTNAFFMIMPFINSINIA 111 (114)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (114)
..+. ...++||++.|++.+|.-|
T Consensus 215 ~~~~-------~~~~~~~~~~p~~~~L~~w 237 (271)
T 2a6t_A 215 NKPQ-------TMKNKFYMVIPFLAPLKKW 237 (271)
T ss_dssp ------------CCGGGTTTGGGHHHHHHH
T ss_pred cCcc-------ccccchhhhhHHHHHHHHH
Confidence 3221 2478899999999999865
No 3
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.38 E-value=3.2e-13 Score=92.00 Aligned_cols=75 Identities=24% Similarity=0.294 Sum_probs=50.7
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCe---EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQ---LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~---~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l 76 (114)
++..||+.+||+||++||||+++.. +++...|.....+.. .+.+|.+.... ..+...+|+.+++||+++++
T Consensus 34 ve~gEt~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~----~~~~~~~E~~~~~W~~~~e~ 109 (134)
T 3i7u_A 34 IEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERIFKTVKYYLMKYKE----GEPRPSWEVKDAKFFPIKEA 109 (134)
T ss_dssp CCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEE----ECCCCCTTSSEEEEEEHHHH
T ss_pred ecCCCCHHHHHHHHHHHhcCceEEEeeeeeeeeEEecCCCceEEEEEEEEEEEEcC----CcCcCChhheEEEEEEHHHH
Confidence 5788999999999999999999985 444333333322221 23445444322 23445679999999999998
Q ss_pred CCCc
Q psy13065 77 PSSR 80 (114)
Q Consensus 77 p~~~ 80 (114)
+.+.
T Consensus 110 ~~~l 113 (134)
T 3i7u_A 110 KKLL 113 (134)
T ss_dssp HHHB
T ss_pred hhhc
Confidence 7653
No 4
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.31 E-value=1.1e-11 Score=84.84 Aligned_cols=79 Identities=16% Similarity=0.169 Sum_probs=51.0
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCch
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSRK 81 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~~ 81 (114)
.+..||+.+||+||++||||+++...-....+ .........+|++....+.........+|+.+++|+++++++....
T Consensus 55 ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 132 (156)
T 3gg6_A 55 MEPGETIVEALQREVKEEAGLHCEPETLLSVE--ERGPSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLR 132 (156)
T ss_dssp CCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEE--ESSTTEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBS
T ss_pred ccCCCCHHHHHHHHHHHhhCceeEeeeEEEEE--cCCCCEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCccccc
Confidence 46789999999999999999999852111111 1223344455555433222221122347999999999999997665
Q ss_pred h
Q psy13065 82 E 82 (114)
Q Consensus 82 ~ 82 (114)
.
T Consensus 133 ~ 133 (156)
T 3gg6_A 133 A 133 (156)
T ss_dssp C
T ss_pred c
Confidence 3
No 5
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.28 E-value=1.6e-11 Score=84.85 Aligned_cols=83 Identities=14% Similarity=0.244 Sum_probs=52.1
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCeE-EEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQL-TRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~~-~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++.. ++....+.......+. ..+|++....+. ......+|+.+++|+++++++.
T Consensus 63 ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 63 VDWLEPVERAVCREIEEELGIALERATLLCVVDHIDAANGEHWVAPVYLAHAFSGE--PRVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCEEESCEEEEEEEEEETTTTEEEEEEEEEESEEESC--CCCSCTTTEEEEEEEETTSCCS
T ss_pred CCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEeeccCCCcEEEEEEEEEEEcCCC--cccCCCCcEeEEEEECHHHccc
Confidence 4678999999999999999999975 3332222211112222 334444322222 2223457899999999999998
Q ss_pred Cchhhhhh
Q psy13065 79 SRKEIKTV 86 (114)
Q Consensus 79 ~~~~~~~~ 86 (114)
...+..+.
T Consensus 141 ~l~~~~~~ 148 (157)
T 4dyw_A 141 PLTHATRI 148 (157)
T ss_dssp SBCHHHHH
T ss_pred ccCHHHHH
Confidence 66554443
No 6
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.25 E-value=1.2e-11 Score=83.18 Aligned_cols=76 Identities=13% Similarity=0.174 Sum_probs=49.4
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeee--ccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCC-
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLET--TYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLP- 77 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~--~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp- 77 (114)
++..||+.+||+||++||||+++...-....+... ....+ ...+|.+.. .+ .+...+|+.+++|+++++++
T Consensus 46 ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~----~~~~~~e~~~~~W~~~~el~~ 120 (139)
T 2yyh_A 46 VEVGERVEEAAAREMREETGLEVRLHKLMGVYSDPERDPRAHVVSVVWIGDA-QG----EPKAGSDAKKVKVYRLEEIPL 120 (139)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCCEEEEEEEEECCTTSCTTSCEEEEEEEEEE-ES----CCCCCTTEEEEEEECTTSCCG
T ss_pred CCCCCCHHHHHHHHHHHHHCCCcccceEEEEECCCCcCCCceEEEEEEEEec-CC----ccCCCCCcceEEEEEHHHCCH
Confidence 46789999999999999999998752111111111 11123 344555543 22 23346799999999999999
Q ss_pred -CCchh
Q psy13065 78 -SSRKE 82 (114)
Q Consensus 78 -~~~~~ 82 (114)
.+..+
T Consensus 121 ~~l~~~ 126 (139)
T 2yyh_A 121 DKLVFD 126 (139)
T ss_dssp GGBCTT
T ss_pred hhcCCC
Confidence 66554
No 7
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.22 E-value=1.7e-11 Score=83.54 Aligned_cols=73 Identities=18% Similarity=0.309 Sum_probs=47.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l 76 (114)
++..||+.+||+||++||||+++.. +++...+...........+|.+.... ..... ...+|+.+++|++++++
T Consensus 38 ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~-~~~~~-~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 38 LEADETLVEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQ-ICPTQ-PHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCTTSCCEEEEEEEEECSS-CCCCC-CCSTTCCEEEEECHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHCcccccCcEEEEEEEecCCCceEEEEEEEEEccc-cCcCC-CCcccceeeEEecHHHh
Confidence 4678999999999999999999985 33322222221122333445554332 22122 23579999999999999
No 8
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.21 E-value=1.5e-11 Score=84.71 Aligned_cols=77 Identities=14% Similarity=0.160 Sum_probs=48.4
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeeccee--eeeccCC-eEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSY--LETTYND-QLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y--~~~~~~~-~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l 76 (114)
++..||+.+||+||++||||+++.. ++....+ ....... ....+|++...+.. ..+...+|+.+++||+++++
T Consensus 45 ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~E~~~~~W~~~~ea 122 (155)
T 3u53_A 45 VEPGEDDLETALRETQEEAGIEAGQLTIIEGFKRELNYVARNKPKTVIYWLAEVKDYD--VEIRLSHEHQAYRWLGLEEA 122 (155)
T ss_dssp CCSSCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETTEEEEEEEEEEEESCTT--CCCCCCTTEEEEEEECHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHCCccccceeeeeEeeeeecCCCcceeEEEEEEEEEeccC--CccCCCcceeEEEEeEHHHH
Confidence 5789999999999999999999875 2221111 1111122 23344444433322 23445679999999999987
Q ss_pred CCCc
Q psy13065 77 PSSR 80 (114)
Q Consensus 77 p~~~ 80 (114)
+.+.
T Consensus 123 ~~~~ 126 (155)
T 3u53_A 123 CQLA 126 (155)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6543
No 9
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.20 E-value=2.6e-11 Score=87.82 Aligned_cols=78 Identities=19% Similarity=0.208 Sum_probs=50.5
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceee-e--eccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYL-E--TTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~-~--~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l 76 (114)
.+..||+.+||+||++||||+++.. ++....+. . .....+.+.+|+.+.... ..+...+|+.+++||++++|
T Consensus 99 ve~gEs~~~aa~REl~EEtGl~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~E~~~~~w~~~~el 175 (205)
T 3q1p_A 99 ADVGYTPTEVAAKEVFEETGYEVDHFKLLAIFDKEKHQPSPSATHVYKIFIGCEIIG---GEKKTSIETEEVEFFGENEL 175 (205)
T ss_dssp CCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEHHHHSCCCCSSCEEEEEEEEEEEE---ECCCCCTTSCCEEEECTTSC
T ss_pred cCCCCCHHHHHHHHHHHHHCCccccceEEEEEeccccCCCCCCceEEEEEEEEEecC---CccCCCCcceEEEEEeHHHh
Confidence 4678999999999999999999985 33211110 0 111234444444444322 12334579999999999999
Q ss_pred CCCchh
Q psy13065 77 PSSRKE 82 (114)
Q Consensus 77 p~~~~~ 82 (114)
|.+...
T Consensus 176 ~~l~~~ 181 (205)
T 3q1p_A 176 PNLSIA 181 (205)
T ss_dssp CCBCTT
T ss_pred hhcCCC
Confidence 987643
No 10
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.19 E-value=5.2e-11 Score=81.79 Aligned_cols=78 Identities=18% Similarity=0.168 Sum_probs=45.3
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeec---ceeeeeccCCe----EEEEEEEeccCCCCccCcCCcCcccceEEEe
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAE---DSYLETTYNDQ----LTRLYLIPGVPIDFKFAPQTRGEIKACQWFP 72 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~---~~y~~~~~~~~----~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~ 72 (114)
++..||+.+||+||++||||+++.. +++. ..+...+.++. ...+|.+....+. ..+ ..+|+.+++|++
T Consensus 52 ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~-~~~E~~~~~W~~ 128 (153)
T 3eds_A 52 IELGETPEEAVVREVWEETGLKVQVKKQKGVFGGKEYRYTYSNGDEVEYIVVVFECEVTSGE--LRS-IDGESLKLQYFS 128 (153)
T ss_dssp CCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEECSGGGEEECTTSCEEEEEEEEEEEEEEEEC--CC--------CEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHHCccceeeeEEEEecccceeeecCCCCeEEEEEEEEEEEecCCc--ccc-CCCcEEEEEEEC
Confidence 4678999999999999999999985 2321 01112222322 2344444322221 112 357999999999
Q ss_pred CCCCCCCchh
Q psy13065 73 IGDLPSSRKE 82 (114)
Q Consensus 73 id~lp~~~~~ 82 (114)
+++++.+..+
T Consensus 129 ~~el~~l~~~ 138 (153)
T 3eds_A 129 LSEKPPLALP 138 (153)
T ss_dssp GGGCCCBSSC
T ss_pred HHHCchhccc
Confidence 9999988753
No 11
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.17 E-value=1.1e-10 Score=80.41 Aligned_cols=76 Identities=18% Similarity=0.300 Sum_probs=48.7
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeec-----------cee------e-eec-cCC-eEEEEEEEeccCCCCccCc
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAE-----------DSY------L-ETT-YND-QLTRLYLIPGVPIDFKFAP 59 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~-----------~~y------~-~~~-~~~-~~~~lfv~~~~~~~~~~~p 59 (114)
++..||+.+||+||++||||+++.. ++.. ..+ . ..+ ... ....+|.+....+. ..+
T Consensus 37 ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~ 114 (159)
T 3f6a_A 37 IEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFE--TSP 114 (159)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSC--CCC
T ss_pred ccCCCCHHHHHHHHHHHHhCCCceecccccccccccccccccccccCccccccccCCCCceEEEEEEEEEeCCCC--cCC
Confidence 4678999999999999999999985 2210 010 0 011 111 22344555543322 222
Q ss_pred CCcCcccceEEEeCCCCCCCc
Q psy13065 60 QTRGEIKACQWFPIGDLPSSR 80 (114)
Q Consensus 60 ~~~~EI~~i~Wf~id~lp~~~ 80 (114)
..+|+.+++|+++++++.+.
T Consensus 115 -~~~E~~~~~W~~~~el~~~~ 134 (159)
T 3f6a_A 115 -EIGESKILKWYSKEDLKNAH 134 (159)
T ss_dssp -CTTSCCCEEEECSSSSTTCS
T ss_pred -CCCcccceEEeeHHHHhhCc
Confidence 35799999999999999876
No 12
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.17 E-value=4.1e-11 Score=81.85 Aligned_cols=78 Identities=15% Similarity=0.170 Sum_probs=48.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCC--e-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYND--Q-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~--~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l 76 (114)
++..||+.+||+||++||||+++.. ++....+.....+. + ...+|.+... ..........+|+.+++|++++++
T Consensus 48 ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~~~~e~~~~~W~~~~el 126 (154)
T 2pqv_A 48 IQVNESTEDAVVREVKEELGVKAQAGQLAFVVENRFEVDGVSYHNIEFHYLVDLL-EDAPLTMQEDEKRQPCEWIDLDKL 126 (154)
T ss_dssp CBTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEES-SCCCSEEEETTEEEEEEEEEGGGG
T ss_pred cCCCCCHHHHHHHHHHHHhCCeeeeceEEEEEeeeecCCCCcceEEEEEEEEEec-CCCCcccCCCCceeeEEEeEHHHH
Confidence 4678999999999999999999984 33222222221121 2 2234444332 221111123568999999999999
Q ss_pred CCCc
Q psy13065 77 PSSR 80 (114)
Q Consensus 77 p~~~ 80 (114)
+.+.
T Consensus 127 ~~~~ 130 (154)
T 2pqv_A 127 QNIQ 130 (154)
T ss_dssp GGSC
T ss_pred hhcC
Confidence 9754
No 13
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.15 E-value=7.5e-11 Score=85.39 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=49.5
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceee-eecc--CCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYL-ETTY--NDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~-~~~~--~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l 76 (114)
.+..||+.+||+||++||||+++.. ++....+. .... ..+.+.+|+.+.+..+ .+...+|+.++.|+++++|
T Consensus 100 ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~E~~~~~w~~~~el 176 (206)
T 3o8s_A 100 CDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNPAKSAHRVTKVFILCRLLGG---EFQPNSETVASGFFSLDDL 176 (206)
T ss_dssp CCTTSCHHHHHHHHHHHHHCEEEEEEEEEEEEEHHHHCC-----CEEEEEEEEEEEEE---CCCCCSSCSEEEEECTTSC
T ss_pred cCCCCCHHHHHHHHHHHHHCCcceeeeEEEEEeccccCCCCCCceEEEEEEEEEecCC---eecCCCCceEEEEEeHHHh
Confidence 4678999999999999999999975 33221110 0111 1233334444433221 2334479999999999999
Q ss_pred CCCchh
Q psy13065 77 PSSRKE 82 (114)
Q Consensus 77 p~~~~~ 82 (114)
+.+...
T Consensus 177 ~~l~~~ 182 (206)
T 3o8s_A 177 PPLYLG 182 (206)
T ss_dssp CCBCTT
T ss_pred hhccCC
Confidence 988753
No 14
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.14 E-value=7.1e-11 Score=82.07 Aligned_cols=77 Identities=17% Similarity=0.182 Sum_probs=45.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCe-EEEEEEEeccCCCCccC--cCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQ-LTRLYLIPGVPIDFKFA--PQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~-~~~lfv~~~~~~~~~~~--p~~~~EI~~i~Wf~id~l 76 (114)
++..||+.+||+||++||||+++.. ++. .+.......+ ...+|.+....+..... ..+.+|+.++.|++++++
T Consensus 55 ve~gEs~~~aa~REl~EEtGl~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el 132 (171)
T 3id9_A 55 VENGETLEEAMIREMREETGLEVKIKKLLY--VCDKPDASPSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINEL 132 (171)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCEEEEEEEE--EEEETTSSSCEEEEEEEEEEC-------------CCCCCEEEEETGGG
T ss_pred CCCCCCHHHHHHHHHHHHHCCccccceEEE--EEcccCCCCcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHH
Confidence 4678999999999999999999974 222 1111111222 33334443332221110 113478999999999999
Q ss_pred CCCc
Q psy13065 77 PSSR 80 (114)
Q Consensus 77 p~~~ 80 (114)
+.+.
T Consensus 133 ~~~~ 136 (171)
T 3id9_A 133 SYYG 136 (171)
T ss_dssp GGGT
T ss_pred hhCC
Confidence 8753
No 15
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.14 E-value=3.7e-11 Score=82.01 Aligned_cols=79 Identities=19% Similarity=0.182 Sum_probs=49.6
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeeeccC-Ce-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLETTYN-DQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSS 79 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~~~~-~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~ 79 (114)
++..||+.+||+||++||||+++........+.....+ .+ ...+|.+....+ ....+...+|+.++.|+++++++.+
T Consensus 52 ve~gE~~~~aa~RE~~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~~ 130 (159)
T 1sjy_A 52 VEDGENPQDAAVREACEETGLRVRPVKFLGAYLGRFPDGVLILRHVWLAEPEPG-QTLAPAFTDEIAEASFVSREDFAQL 130 (159)
T ss_dssp CCTTSCHHHHHHHHHHHHHSCCEEEEEEEEEEEEECTTSCEEEEEEEEEEECSS-CCCCCCCCSSEEEEEEECHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHCccceeeEEEEEEecccCCCceEEEEEEEEEccCC-CccccCCCCceeEEEEecHHHHHHh
Confidence 46789999999999999999999852111112111223 22 344455443222 1122224579999999999998866
Q ss_pred ch
Q psy13065 80 RK 81 (114)
Q Consensus 80 ~~ 81 (114)
..
T Consensus 131 ~~ 132 (159)
T 1sjy_A 131 YA 132 (159)
T ss_dssp HH
T ss_pred hh
Confidence 54
No 16
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.14 E-value=6.3e-11 Score=80.98 Aligned_cols=73 Identities=12% Similarity=0.040 Sum_probs=49.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCeE-EEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQL-TRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~~-~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++.. +++. +......... ..+|.+....+ .+...+|+.+++|+++++++.
T Consensus 45 ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~e~~~~~W~~~~el~~ 118 (153)
T 3grn_A 45 VNPDESLKEGVAREVWEETGITMVPGDIAGQ--VNFELTEKKVIAIVFDGGYVVA----DVKLSYEHIEYSWVSLEKILG 118 (153)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCCCCCSEEEE--EEEECSSCEEEEEEEEEEECCC----CCCCCTTEEEEEEECHHHHTT
T ss_pred cCCCCCHHHHHHhhhhhhhCcEeecceEEEE--EEEecCCceEEEEEEEEEecCC----cEecCCCcceEEEEEHHHhhh
Confidence 4678999999999999999999985 3322 2122223333 44455443332 233357999999999999887
Q ss_pred Cc
Q psy13065 79 SR 80 (114)
Q Consensus 79 ~~ 80 (114)
+.
T Consensus 119 ~~ 120 (153)
T 3grn_A 119 ME 120 (153)
T ss_dssp CS
T ss_pred cc
Confidence 65
No 17
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.13 E-value=5.4e-11 Score=78.32 Aligned_cols=74 Identities=14% Similarity=0.132 Sum_probs=48.9
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSS 79 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~ 79 (114)
++..||+.+||+||++||||+++.. +++...|... .....+.+|.+....+. +...+|+.+++|+++++++..
T Consensus 33 ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~e~~~~~w~~~~el~~~ 107 (126)
T 1vcd_A 33 PEPGESLEEAAVREVWEETGVRAEVLLPLYPTRYVNP-KGVEREVHWFLMRGEGA----PRLEEGMTGAGWFSPEEARAL 107 (126)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEECT-TSCEEEEEEEEEEEESC----CCCCTTCCEEEEECHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhhCcEeeeccEEeEEEEecC-CceEEEEEEEEEEcCCC----CCCCcceeeeEEcCHHHHHHh
Confidence 4678999999999999999999985 3332222221 11233455555433221 334578999999999998764
Q ss_pred c
Q psy13065 80 R 80 (114)
Q Consensus 80 ~ 80 (114)
.
T Consensus 108 ~ 108 (126)
T 1vcd_A 108 L 108 (126)
T ss_dssp B
T ss_pred h
Confidence 3
No 18
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.13 E-value=9.7e-11 Score=78.93 Aligned_cols=74 Identities=15% Similarity=0.034 Sum_probs=49.0
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeee--eecceeeeeccCC-eEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHL--IAEDSYLETTYND-QLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~l--i~~~~y~~~~~~~-~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++... ++. +....... ..+.+|.+....+ .+. .+|+.+++|+++++++.
T Consensus 43 ve~gE~~~~aa~REl~EE~Gl~~~~~~~~~~--~~~~~~~~~~~~~~f~~~~~~~----~~~-~~E~~~~~W~~~~el~~ 115 (140)
T 3gwy_A 43 VEEGESLQEALQREIMEEMDYVIEVGEKLLT--VHHTYPDFEITMHAFLCHPVGQ----RYV-LKEHIAAQWLSTREMAI 115 (140)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCEEEEEEEEE--EECCCSSCCEEEEEEEEEECCS----CCC-CCSSCEEEEECHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHhhCcEEEeceEEEE--EEEEeCCceEEEEEEEEEecCC----ccc-ccccceeEeccHHHHhh
Confidence 46789999999999999999999852 322 11112222 3345555543322 222 36899999999999887
Q ss_pred Cchh
Q psy13065 79 SRKE 82 (114)
Q Consensus 79 ~~~~ 82 (114)
+...
T Consensus 116 ~~~~ 119 (140)
T 3gwy_A 116 LDWA 119 (140)
T ss_dssp SCBC
T ss_pred CCCC
Confidence 6543
No 19
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.12 E-value=1.4e-11 Score=84.15 Aligned_cols=78 Identities=15% Similarity=0.124 Sum_probs=47.4
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeee-ccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCc
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLET-TYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSR 80 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~-~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~ 80 (114)
++..||+.+||+||++||||+++..+.....+... ......+++|++.....+ .. ....+|+.++.|+++++++.+.
T Consensus 41 ve~gEt~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~-~~-~~~~~E~~~~~w~~~~el~~~~ 118 (145)
T 2w4e_A 41 VEKGEDLGAAAARELLEEVGGAASEWVPLPGFYPQPSISGVVFYPLLALGVTLG-AA-QLEDTETIERVVLPLAEVYRML 118 (145)
T ss_dssp CCTTCCHHHHHHHHHHHHHCEECSEEEECCCBBSCTTTCCCEEEEEEEEEEEEC----------CEEEEEEEHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhhCCccCeEEEEecCcCCCCccCceEEEEEEEecccC-CC-CCCCCCeEEEEEEeHHHHHHHH
Confidence 47789999999999999999998753221122111 112344566666533311 11 1235789999999999998765
Q ss_pred h
Q psy13065 81 K 81 (114)
Q Consensus 81 ~ 81 (114)
.
T Consensus 119 ~ 119 (145)
T 2w4e_A 119 E 119 (145)
T ss_dssp H
T ss_pred H
Confidence 4
No 20
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.12 E-value=1.6e-11 Score=88.16 Aligned_cols=77 Identities=19% Similarity=0.295 Sum_probs=45.4
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecce-eeeeccCCeEEEEEEEeccC-CCCccCcCCcCcccceEEEeCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDS-YLETTYNDQLTRLYLIPGVP-IDFKFAPQTRGEIKACQWFPIGDLP 77 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~-y~~~~~~~~~~~lfv~~~~~-~~~~~~p~~~~EI~~i~Wf~id~lp 77 (114)
++..||+.+||+||++||||+++.. ++.... +.... ......+|+++.+. ......+ ..+|+.++.|+++++++
T Consensus 61 ve~gEs~~~aA~REl~EEtGl~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~E~~~~~W~~~~el~ 138 (199)
T 3h95_A 61 SEPEEDIGDTAVREVFEETGIKSEFRSVLSIRQQHTNPG-AFGKSDMYIICRLKPYSFTINF-CQEECLRCEWMDLNDLA 138 (199)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCEEEEEEEEEEECC----------CEEEEEEEEESCCCCCC-CTTTEEEEEEEEHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHhCCccccceEEEEEeeecCCC-CceeEEEEEEEEEcCCCcccCC-CccceeeeEEEeHHHHh
Confidence 4678999999999999999999884 332111 11111 11222233333322 2222222 35799999999999998
Q ss_pred CCc
Q psy13065 78 SSR 80 (114)
Q Consensus 78 ~~~ 80 (114)
.+.
T Consensus 139 ~~~ 141 (199)
T 3h95_A 139 KTE 141 (199)
T ss_dssp HCS
T ss_pred hhh
Confidence 643
No 21
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.11 E-value=9.1e-11 Score=81.07 Aligned_cols=76 Identities=12% Similarity=0.037 Sum_probs=46.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeec---ce-eeeeccCCe----EE--EEEEEeccCCCCccCcCCcCcccceE
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAE---DS-YLETTYNDQ----LT--RLYLIPGVPIDFKFAPQTRGEIKACQ 69 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~---~~-y~~~~~~~~----~~--~lfv~~~~~~~~~~~p~~~~EI~~i~ 69 (114)
++..||+.+||+||++||||+++.. ++.. .. +...+..+. .. .+|.+.... ..+...+|+.+++
T Consensus 64 ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~E~~~~~ 139 (165)
T 3oga_A 64 VEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRIKTYADGRQEEIYMIYLIFDCVSAN----RDICINDEFQDYA 139 (165)
T ss_dssp CCTTCCHHHHHHHHHHHHHCSSCCEEEEEEEEEEEEEEEEEC--CCEEEEEEEEEEEEEEESC----CCCCCCTTEEEEE
T ss_pred cCCCCCHHHHHHHHHHHHhCCCccccceeeeeeecceeeEecCCCCceeEEEEEEEEEeeccC----CCccCCchheeeE
Confidence 4678999999999999999999874 2211 11 111222221 11 222232221 1223347999999
Q ss_pred EEeCCCCCCCch
Q psy13065 70 WFPIGDLPSSRK 81 (114)
Q Consensus 70 Wf~id~lp~~~~ 81 (114)
|+++++++.+..
T Consensus 140 W~~~~el~~~~~ 151 (165)
T 3oga_A 140 WVKPEELALYDL 151 (165)
T ss_dssp EECGGGGGGSCB
T ss_pred EccHHHHhhCCC
Confidence 999999998643
No 22
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.11 E-value=2e-10 Score=79.61 Aligned_cols=75 Identities=17% Similarity=0.228 Sum_probs=48.0
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCeE-EEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQL-TRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~~-~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++.. ++....+......... ..+|.+....+ .+. .+|..+++|+++++++.
T Consensus 46 ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~e~~~~~W~~~~el~~ 120 (161)
T 3exq_A 46 VEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDDDRQHRKLGLLYRASNFTG----TLK-ASAEGQLSWLPITALTR 120 (161)
T ss_dssp CCTTSCHHHHHHHHHHHHHCCEESCCEEEEEEEEECSSCSSEEEEEEEEECCEES----CCC-GGGTTTEEEECGGGCCT
T ss_pred cCCCCCHHHHHHHHHHHhhCcEecCCcEEEEEecccCCCCeEEEEEEEEEeccCC----ccC-CCccceEEEeeHHHhhh
Confidence 4678999999999999999999985 3332222221122232 33344432222 232 45788999999999998
Q ss_pred Cch
Q psy13065 79 SRK 81 (114)
Q Consensus 79 ~~~ 81 (114)
+..
T Consensus 121 ~~~ 123 (161)
T 3exq_A 121 ENS 123 (161)
T ss_dssp TTB
T ss_pred Ccc
Confidence 643
No 23
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.10 E-value=5.6e-11 Score=80.64 Aligned_cols=76 Identities=20% Similarity=0.211 Sum_probs=47.7
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCeE-EEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQL-TRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~~-~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++.. +++...|......... ..+|.+...... . .....+|+.+++|+++++++.
T Consensus 42 ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~-~~~~~~e~~~~~W~~~~el~~ 119 (153)
T 2b0v_A 42 LEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCASNGTTYLRFTFSGQVVSFD-P-DRKLDTGIVRAAWFSIDEIRA 119 (153)
T ss_dssp CCTTSCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEC-T-TSCCCTTEEEEEEEEHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhhCcEeccceEEEEEEEeCCCCCcEEEEEEEEEEeCCCC-C-CCCCCCCeeeEEEecHHHHhh
Confidence 4678999999999999999999985 3332222222111122 233444322211 1 112357899999999999987
Q ss_pred C
Q psy13065 79 S 79 (114)
Q Consensus 79 ~ 79 (114)
+
T Consensus 120 ~ 120 (153)
T 2b0v_A 120 K 120 (153)
T ss_dssp T
T ss_pred h
Confidence 5
No 24
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.10 E-value=8.6e-12 Score=88.58 Aligned_cols=77 Identities=12% Similarity=0.050 Sum_probs=46.3
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeee--eecceeeeeccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHL--IAEDSYLETTYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~l--i~~~~y~~~~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++..+ ++...+......+. ...+|++..... ....+...+|+.+++|+++++++.
T Consensus 76 ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~E~~~~~W~~~~el~~ 154 (187)
T 3i9x_A 76 VDENESAEQAAERELEEETSLTDIPLIPFGVFDKPGRDPRGWIISRAFYAIVPPE-ALEKRAAGDDAAEIGLFPMTEALE 154 (187)
T ss_dssp CCTTSCHHHHHHHHHHHHHCCCSCCCEEEEEECCTTSSTTSSEEEEEEEEECCHH-HHHHHHHSTTTTTEEEEEHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCcceEEEEEEcCCccCCCCCEEEEEEEEEEcCc-ccCCcCCCCceeEEEEEeHHHccc
Confidence 46789999999999999999998752 32111111111222 233344322111 111122357999999999999986
Q ss_pred C
Q psy13065 79 S 79 (114)
Q Consensus 79 ~ 79 (114)
+
T Consensus 155 ~ 155 (187)
T 3i9x_A 155 L 155 (187)
T ss_dssp S
T ss_pred C
Confidence 4
No 25
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.09 E-value=7.4e-11 Score=87.00 Aligned_cols=79 Identities=11% Similarity=0.132 Sum_probs=50.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeee--eccCCeEEE-EEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLE--TTYNDQLTR-LYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~--~~~~~~~~~-lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++..+-....|.. ...+++.+. .|++. +..+. .+...+|+.+++|+++++++.
T Consensus 51 ve~gEs~~~Aa~REl~EEtGl~~~~~~~l~~~~~~~r~~~~~~v~~~y~a~-~~~~~--~~~~~~e~~~~~W~~~~el~~ 127 (226)
T 2fb1_A 51 VQKDESVDDAAKRVLAELTGLENVYMEQVGAFGAIDRDPGERVVSIAYYAL-ININE--YDRELVQKHNAYWVNINELPA 127 (226)
T ss_dssp CCTTSCHHHHHHHHHHHHHCCCSCEEEEEEEECCTTSSSSSCEEEEEEEEE-CCTTS--SCHHHHHHTTEEEEETTSCCC
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCCceEEEEEeCCCCcCCCceEEEEEEEEE-ecCcc--cccCCccccceEEEEHHHhhh
Confidence 4778999999999999999999874211111111 122334333 44443 32221 112346899999999999998
Q ss_pred Cchhh
Q psy13065 79 SRKEI 83 (114)
Q Consensus 79 ~~~~~ 83 (114)
+..+.
T Consensus 128 l~~dh 132 (226)
T 2fb1_A 128 LIFDH 132 (226)
T ss_dssp BSTTH
T ss_pred ccCCH
Confidence 87653
No 26
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.09 E-value=1.1e-10 Score=77.95 Aligned_cols=76 Identities=9% Similarity=0.069 Sum_probs=47.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--ee-e-cceeeeeccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LI-A-EDSYLETTYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li-~-~~~y~~~~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l 76 (114)
.+..||+.+||+||++||||+++.. ++ . ...+.+.....+ .+.+|.+... ... .....+|+.+++|++++++
T Consensus 39 ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~--~~~~~~e~~~~~W~~~~el 115 (138)
T 1ktg_A 39 VDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEAKGKPKSVKYWLAKLN-NPD--DVQLSHEHQNWKWCELEDA 115 (138)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEETTEEEEEEEEEEEEC-SCC--CCCCCTTEEEEEEECHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEeCCCceEEEEEEEEec-CCc--ccCCCchhcEeEeccHHHH
Confidence 4678999999999999999996543 22 1 111111122222 3444555432 211 2234579999999999999
Q ss_pred CCCc
Q psy13065 77 PSSR 80 (114)
Q Consensus 77 p~~~ 80 (114)
+.+.
T Consensus 116 ~~~~ 119 (138)
T 1ktg_A 116 IKIA 119 (138)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8754
No 27
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.09 E-value=1.5e-10 Score=82.67 Aligned_cols=75 Identities=12% Similarity=0.011 Sum_probs=47.4
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCC--e--EEEEEEEeccCCCCccCcCCcCcccceEEEeCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYND--Q--LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGD 75 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~--~--~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~ 75 (114)
++..||+.+||+||++||||+++.. +++...+....... . .+.+|.+....+ .+....|..+++|+++++
T Consensus 35 ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~----~~~~~~e~~~~~W~~~~e 110 (188)
T 3fk9_A 35 MEAGESILETVKREYWEETGITVKNPELKGIFSMVIFDEGKIVSEWMLFTFKATEHEG----EMLKQSPEGKLEWKKKDE 110 (188)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCEESSCEEEEEEEEEEEETTEEEEEEEEEEEEESCEES----CCCSEETTEEEEEEEGGG
T ss_pred ccCCCCHHHHHHHHHHHHHCCCCCCceEEEEEEEEecCCCcceEEEEEEEEEEECCCC----CCcCCCCCEeEEEEEHHH
Confidence 4678999999999999999999985 33322232222221 1 234444443222 223334557999999999
Q ss_pred CCCCc
Q psy13065 76 LPSSR 80 (114)
Q Consensus 76 lp~~~ 80 (114)
++.+.
T Consensus 111 l~~~~ 115 (188)
T 3fk9_A 111 VLELP 115 (188)
T ss_dssp GGGSC
T ss_pred hhhCC
Confidence 98643
No 28
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.09 E-value=4.7e-11 Score=81.69 Aligned_cols=81 Identities=21% Similarity=0.229 Sum_probs=49.6
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeec----ceeeee-------------ccCCeEEEEEEEeccCCCCccCc----C
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAE----DSYLET-------------TYNDQLTRLYLIPGVPIDFKFAP----Q 60 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~----~~y~~~-------------~~~~~~~~lfv~~~~~~~~~~~p----~ 60 (114)
++..||+.+||+||++||||+++..+... ..|... ...++...+|++........... .
T Consensus 47 ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 126 (165)
T 1f3y_A 47 IDEGEDPRNAAIRELREETGVTSAEVIAEVPYWLTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGS 126 (165)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSCCBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSS
T ss_pred cCCCCCHHHHHHHHHHHhhCCChhhhhcccccceeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCC
Confidence 46789999999999999999998654321 111110 00122445566543222111111 1
Q ss_pred CcCcccceEEEeCCCCCCCchh
Q psy13065 61 TRGEIKACQWFPIGDLPSSRKE 82 (114)
Q Consensus 61 ~~~EI~~i~Wf~id~lp~~~~~ 82 (114)
..+|+.+++|+++++++.+..+
T Consensus 127 ~~~E~~~~~W~~~~el~~~~~~ 148 (165)
T 1f3y_A 127 EKPEFGEWSWVTPEQLIDLTVE 148 (165)
T ss_dssp SCCSEEEEEEECHHHHHHHBCG
T ss_pred CCChhheeEEecHHHHHHHhhh
Confidence 3569999999999999876543
No 29
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.09 E-value=5e-10 Score=79.70 Aligned_cols=74 Identities=19% Similarity=0.101 Sum_probs=49.8
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCC--
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLP-- 77 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp-- 77 (114)
++..||+.+||+||++||||+++.. ++.. +... .......+|.+....+ .+...+|+.+++|+++++++
T Consensus 74 ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~--~~~~-~~~~~~~~f~~~~~~~----~~~~~~E~~~~~W~~~~el~~~ 146 (189)
T 3cng_A 74 MENNETLVQGAARETLEEANARVEIRELYAV--YSLP-HISQVYMLFRAKLLDL----DFFPGIESLEVRLFGEQEIPWN 146 (189)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCEEEEEEEEE--EEEG-GGTEEEEEEEEEECCS----CCCCCTTEEEEEEECTTTCCGG
T ss_pred ccCCCCHHHHHHHHHHHHHCCccccceeEEE--EecC-CCcEEEEEEEEEeCCC----ccCCCccceeEEEECHHHcCcc
Confidence 4678999999999999999999874 2221 1111 1234455566554322 22335799999999999999
Q ss_pred CCchh
Q psy13065 78 SSRKE 82 (114)
Q Consensus 78 ~~~~~ 82 (114)
.+..+
T Consensus 147 ~l~~~ 151 (189)
T 3cng_A 147 DIAFR 151 (189)
T ss_dssp GBSCH
T ss_pred cccCh
Confidence 55443
No 30
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.09 E-value=1.2e-10 Score=79.39 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=47.6
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++.. ++....+.. ..+.+ ...+|.+....+ .+. ..|+.+++|+++++++.
T Consensus 45 ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~-~~e~~~~~W~~~~el~~ 118 (155)
T 2b06_A 45 VENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPL-DTGGRYIVICYKATEFSG----TLQ-SSEEGEVSWVQKDQIPN 118 (155)
T ss_dssp CCTTSCHHHHHHHHHHHHHSEEEESCEEEEEEEEEC-TTSCEEEEEEEEECEEEE----CCC-CBTTBEEEEEEGGGGGG
T ss_pred cCCCCCHHHHHHHHHHHHhCccccCCcEEEEEeecc-CCCceEEEEEEEEEecCC----CCC-CCcceeeEEeeHHHhhh
Confidence 4678999999999999999999985 332222221 11222 234444432211 222 25789999999999997
Q ss_pred Cch
Q psy13065 79 SRK 81 (114)
Q Consensus 79 ~~~ 81 (114)
+..
T Consensus 119 ~~~ 121 (155)
T 2b06_A 119 LNL 121 (155)
T ss_dssp SCB
T ss_pred CCC
Confidence 654
No 31
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.08 E-value=4.1e-10 Score=85.56 Aligned_cols=76 Identities=20% Similarity=0.178 Sum_probs=50.1
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCch
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSRK 81 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~~ 81 (114)
+|..||+++||+||++||||+++..+-....+.... ....+..|++....+. ..+ ..+|+.+++||++++++.+..
T Consensus 173 vE~GEt~eeAa~REv~EEtGl~v~~~~~~~~~~~~~-~~~~~~~f~a~~~~~~--~~~-~~~E~~~~~W~~~~el~~l~~ 248 (269)
T 1vk6_A 173 VEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPF-PQSLMTAFMAEYDSGD--IVI-DPKELLEANWYRYDDLPLLPP 248 (269)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCEEEEEEEEEEEEEET-TEEEEEEEEEEEEECC--CCC-CTTTEEEEEEEETTSCCSCCC
T ss_pred CCCCCCHHHHHHHHHHHHhCceeeeEEEEEEEecCC-CCEEEEEEEEEECCCC--cCC-CCcceEEEEEEEHHHhhhccc
Confidence 577899999999999999999998632111111111 2234555655433222 222 357999999999999997654
No 32
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.08 E-value=4.7e-10 Score=78.76 Aligned_cols=73 Identities=15% Similarity=0.093 Sum_probs=47.4
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCch
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSRK 81 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~~ 81 (114)
++..||+.+||+||++||||+++...-....| .+ ......+|++. +++ .+...+|+.+++||+.+.++....
T Consensus 46 ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~--~~-~~~~~~~f~~~-~~~----~~~~~~E~~~~~W~~~~~~~~~l~ 117 (163)
T 3f13_A 46 ANRGELRSQALIREIREETGLRINSMLYLFDH--IT-PFNAHKVYLCI-AQG----QPKPQNEIERIALVSSPDTDMDLF 117 (163)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCCCEEEEEEEE--EC-SSEEEEEEEEE-C-C----CCCCCTTCCEEEEESSTTCSSCBC
T ss_pred CCCCCCHHHHHHHHHHHHHCcccceeEEEEEE--ec-CCeEEEEEEEE-ECC----cCccCCCceEEEEECcccccCCCC
Confidence 46789999999999999999999753211112 11 22444555553 332 344456999999999766664443
Q ss_pred h
Q psy13065 82 E 82 (114)
Q Consensus 82 ~ 82 (114)
+
T Consensus 118 ~ 118 (163)
T 3f13_A 118 V 118 (163)
T ss_dssp H
T ss_pred H
Confidence 3
No 33
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.08 E-value=1.1e-10 Score=81.67 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=49.0
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeeeccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCc
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLETTYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSR 80 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~ 80 (114)
++..||+.+||+||++||||+++..+.....+.......+ ...+|++. ..+. ..+ ..+|+.++.|+++++++.+.
T Consensus 75 ve~gE~~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~-~~~~--~~~-~~~E~~~~~W~~~~el~~~~ 150 (180)
T 2fkb_A 75 VQADEQLLESARREAEEELGIAGVPFAEHGQFYFEDKNCRVWGALFSCV-SHGP--FAL-QEDEVSEVCWLTPEEITARC 150 (180)
T ss_dssp CBTTCCHHHHHHHHHHHHHCCBSCCCEEEEEEEEEETTEEEEEEEEEEE-CCCC--CCC-CTTTEEEEEEECHHHHHTTG
T ss_pred CCCCCCHHHHHHHHHHHHHCCCccceEEEEEEEecCCCceEEEEEEEEe-cCCC--cCC-ChhHhheEEEecHHHHHHHH
Confidence 4678999999999999999998875321122322222222 34455554 3222 122 35799999999999999874
No 34
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.07 E-value=7.8e-11 Score=78.16 Aligned_cols=75 Identities=24% Similarity=0.297 Sum_probs=48.0
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCC---eEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYND---QLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~---~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l 76 (114)
.+..||+.+||+||++||||+++.. +++...+.....+. ..+.+|.+....+ .+...+|+.+++|++++++
T Consensus 34 ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~e~~~~~W~~~~el 109 (134)
T 2pbt_A 34 IEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERIFKTVKYYLMKYKEG----EPRPSWEVKDAKFFPIKEA 109 (134)
T ss_dssp CCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEE----CCCCCTTSSEEEEEEHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHCCccEEeeeeeEEEEEeeCCCcEEEEEEEEEEEEecCC----CcCCCcceeEEEEEcHHHH
Confidence 4678999999999999999999985 33322232222121 2234444443222 2223349999999999998
Q ss_pred CCCc
Q psy13065 77 PSSR 80 (114)
Q Consensus 77 p~~~ 80 (114)
+.+.
T Consensus 110 ~~~~ 113 (134)
T 2pbt_A 110 KKLL 113 (134)
T ss_dssp HHHC
T ss_pred Hhhh
Confidence 8643
No 35
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.07 E-value=4.4e-10 Score=77.11 Aligned_cols=75 Identities=19% Similarity=0.102 Sum_probs=48.6
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCeE-EEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQL-TRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~~-~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++.. +.....+.......+. +.+|.+....+ .+ ..+|+.++.|+++++++.
T Consensus 65 ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~e~~~~~W~~~~el~~ 139 (158)
T 3hhj_A 65 VEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGYETFHLLMPLYFCSHYKG----VA-QGREGQNLKWIFINDLDK 139 (158)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSCEEEEEEEEESCCBS----CC-CCTTSCEEEEEEGGGGGG
T ss_pred ecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeeccCCcEEEEEEEEEEECCC----cc-CCccccceEEEcHHHHhh
Confidence 4678999999999999999999985 2222222223333333 33444433222 22 246889999999999987
Q ss_pred Cch
Q psy13065 79 SRK 81 (114)
Q Consensus 79 ~~~ 81 (114)
+..
T Consensus 140 ~~~ 142 (158)
T 3hhj_A 140 YPM 142 (158)
T ss_dssp SCC
T ss_pred CCC
Confidence 543
No 36
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.07 E-value=2.3e-10 Score=82.59 Aligned_cols=78 Identities=10% Similarity=0.115 Sum_probs=51.6
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeee-ccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCc
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLET-TYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSR 80 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~-~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~ 80 (114)
++..||+.+||+||++||||+++..+.....+... ......+.+|++...... .. ....+|..++.|+++++++.+.
T Consensus 84 ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~a~~~~~~-~~-~~~~~E~~~~~w~~~~el~~~~ 161 (198)
T 1vhz_A 84 IDPGESVYEAANRELKEEVGFGANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPE-SL-EGDEPEPLPQVRWPLAHMMDLL 161 (198)
T ss_dssp CCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEECCTTTCCCEEEEEEEEEEEEC-CC-CCCCSSCCCEEEEEGGGGGGGG
T ss_pred CCCCcCHHHHHHHHHHHHHCCCcCceEEEEEEeCCCCccCcEEEEEEEEeCCcc-cC-CCCCCceEEEEEEEHHHHHHHH
Confidence 46789999999999999999999853211122111 112345666766543321 11 2235688999999999999876
Q ss_pred h
Q psy13065 81 K 81 (114)
Q Consensus 81 ~ 81 (114)
.
T Consensus 162 ~ 162 (198)
T 1vhz_A 162 E 162 (198)
T ss_dssp G
T ss_pred H
Confidence 5
No 37
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.07 E-value=3.4e-11 Score=81.85 Aligned_cols=77 Identities=10% Similarity=0.011 Sum_probs=47.6
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeee---ee-ccee---eeeccCC-e-EEEEEEEeccCCCCccCcCCcCcccceEEEe
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHL---IA-EDSY---LETTYND-Q-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFP 72 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~l---i~-~~~y---~~~~~~~-~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~ 72 (114)
++..||+.+||+||++||||+++... +. ...+ ...+.+. . ..++|.+...... ..+...+|+.+++|++
T Consensus 40 ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~E~~~~~W~~ 117 (149)
T 3son_A 40 GEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIPNFHFSFNKPYVVPEYCFAIDLTSCS--YQVTLSLEHSELRWVS 117 (149)
T ss_dssp CCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEEGGGTCSSSCSEEEEEEEEEECTTTG--GGCCCCTTEEEEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeecccceeeccCCceEeEEEEEEEEcCCCC--CcccCCCceeeEEEeC
Confidence 46789999999999999999998752 11 0000 1111222 2 2344555433111 2233357999999999
Q ss_pred CCCCCCCc
Q psy13065 73 IGDLPSSR 80 (114)
Q Consensus 73 id~lp~~~ 80 (114)
+++++.+.
T Consensus 118 ~~el~~~~ 125 (149)
T 3son_A 118 YESAIQLL 125 (149)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99988653
No 38
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.07 E-value=4.5e-10 Score=75.43 Aligned_cols=75 Identities=15% Similarity=0.042 Sum_probs=48.8
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeee--eecceeeeeccCCeE-EEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHL--IAEDSYLETTYNDQL-TRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~l--i~~~~y~~~~~~~~~-~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++... .....+.......+. +.+|.+....+ .+. .+|+.+++|+++++++.
T Consensus 44 ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~e~~~~~W~~~~el~~ 118 (144)
T 3r03_A 44 LEPGETPEAALVRELAEELGVDTRASCLAPLAFASHSYDTFHLLMPLYACRSWRG----RAT-AREGQTLAWVRAERLRE 118 (144)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEECSSSEEEEEEEEECCCBS----CCC-CCSSCEEEEECGGGGGG
T ss_pred ecCCCCHHHHHHHHHHHHhCceeeccceEEEEeeeccCCCeEEEEEEEEEEecCC----ccC-CCCcceEEEEeHHHhcc
Confidence 46789999999999999999999852 322222222223333 34444443222 222 46889999999999887
Q ss_pred Cch
Q psy13065 79 SRK 81 (114)
Q Consensus 79 ~~~ 81 (114)
+..
T Consensus 119 ~~~ 121 (144)
T 3r03_A 119 YPM 121 (144)
T ss_dssp SCC
T ss_pred CCC
Confidence 554
No 39
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.04 E-value=7.7e-10 Score=78.05 Aligned_cols=74 Identities=11% Similarity=0.163 Sum_probs=47.3
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++.. +++...+........ ...+|.+....+ .+. ..|..+++|+++++++.
T Consensus 59 ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~----~~~-~~e~~~~~W~~~~el~~ 133 (176)
T 3q93_A 59 VQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVHVFCTDSIQG----TPV-ESDEMRPCWFQLDQIPF 133 (176)
T ss_dssp CCTTSCHHHHHHHHHHHHHSCEESCCEEEEEEEEEETTCSCEEEEEEEEESCEES----CCC-CCSSEEEEEEETTCCCG
T ss_pred CCCCCCHHHHHHHHHHHHHCCcceeeEEEEEEEEEcCCCCcEEEEEEEEEECCCC----CcC-CCcceeeEEeeHHHccc
Confidence 4678999999999999999999975 333222222221223 234455543322 232 34667889999999996
Q ss_pred Cc
Q psy13065 79 SR 80 (114)
Q Consensus 79 ~~ 80 (114)
+.
T Consensus 134 ~~ 135 (176)
T 3q93_A 134 KD 135 (176)
T ss_dssp GG
T ss_pred cc
Confidence 54
No 40
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.04 E-value=4.4e-10 Score=75.91 Aligned_cols=73 Identities=16% Similarity=0.098 Sum_probs=47.6
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++.. +++. +.+...+.. .+.+|.+....+ .+ ..+|+.++.|+++++++.
T Consensus 57 ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~-~~~e~~~~~W~~~~el~~ 129 (153)
T 3ees_A 57 IENGETPEEALARELNEELGIEAEVGELKLA--CTHSYGDVGILILFYEILYWKG----EP-RAKHHMMLEWIHPEELKH 129 (153)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCEEECCCEEEE--EEEEETTEEEEEEEEEECEEES----CC-CCSSSSEEEEECGGGGGG
T ss_pred eCCCCCHHHHHHHHHHHHHCCccccCceEEE--EEEecCCCeEEEEEEEEEECCC----Cc-CCCccceEEEecHHHhhh
Confidence 4678999999999999999999985 3332 222222222 233444432222 12 246889999999999987
Q ss_pred Cch
Q psy13065 79 SRK 81 (114)
Q Consensus 79 ~~~ 81 (114)
+..
T Consensus 130 ~~~ 132 (153)
T 3ees_A 130 RNI 132 (153)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 41
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.03 E-value=7.7e-11 Score=82.91 Aligned_cols=79 Identities=14% Similarity=0.169 Sum_probs=51.1
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeee-ccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCc
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLET-TYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSR 80 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~-~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~ 80 (114)
++..||+.+||+||++||||+++..+.....+... ......+.+|++......... ....+|+.++.|+++++++.+.
T Consensus 77 ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~-~~~~~E~~~~~W~~~~el~~~~ 155 (182)
T 2yvp_A 77 VDEGETPEAAARRELREEVGAEAETLIPLPSFHPQPSFTAVVFHPFLALKARVVTPP-TLEEGELLESLELPLTEVYALL 155 (182)
T ss_dssp CCTTCCHHHHHHHHHHHHHCEECSCEEECCCBCSCTTTBCCEEEEEEECSCEECSCC-CCCTTCCEEEEEEEHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHhCCCcccEEEEEEEeCCCCccccEEEEEEEeccccCCCC-CCCCCceEEEEEEEHHHHHHHH
Confidence 46789999999999999999998753211122111 112234566666544311111 1245799999999999998765
Q ss_pred h
Q psy13065 81 K 81 (114)
Q Consensus 81 ~ 81 (114)
.
T Consensus 156 ~ 156 (182)
T 2yvp_A 156 A 156 (182)
T ss_dssp H
T ss_pred H
Confidence 4
No 42
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.01 E-value=4.2e-10 Score=73.98 Aligned_cols=73 Identities=15% Similarity=0.213 Sum_probs=47.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeee--eecceeeeeccCCeE-EEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHL--IAEDSYLETTYNDQL-TRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~l--i~~~~y~~~~~~~~~-~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
.+..||+.+||+||++||||+++... +....+ ...+... ..+|.+....+ .+ ..+|+.++.|+++++++.
T Consensus 40 ~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~-~~~e~~~~~W~~~~el~~ 112 (129)
T 1mut_A 40 IEMGETPEQAVVRELQEEVGITPQHFSLFEKLEY--EFPDRHITLWFWLVERWEG----EP-WGKEGQPGEWMSLVGLNA 112 (129)
T ss_dssp SSSCSSTTHHHHHHHHTTTCCSSCEECCCCCCBC--CCSSCEEECCCEEEEECSS----CC-CCCSSCCCEEEESSSCCT
T ss_pred cCCCCCHHHHHHHHHHHHhCCccccceEEEEEEE--ecCCceEEEEEEEEEccCC----cc-CCcccceeEEeCHHHccc
Confidence 46789999999999999999998752 222111 1122222 33444443221 22 246889999999999987
Q ss_pred Cch
Q psy13065 79 SRK 81 (114)
Q Consensus 79 ~~~ 81 (114)
+..
T Consensus 113 ~~~ 115 (129)
T 1mut_A 113 DDF 115 (129)
T ss_dssp TTS
T ss_pred ccC
Confidence 643
No 43
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.00 E-value=9.4e-11 Score=83.34 Aligned_cols=78 Identities=12% Similarity=-0.040 Sum_probs=50.9
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC-CC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL-PS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l-p~ 78 (114)
.+..||+.+||+||++||||+++.. +++...+... ..+..+.+|++.. ..+........+|+.++.|++++++ +.
T Consensus 73 ve~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~-~~~~~~~~f~~~~-~~~~~~~~~~~~E~~~~~W~~~~el~~~ 150 (194)
T 1nqz_A 73 LDAGETPTQAALREAQEEVALDPAAVTLLGELDDVFT-PVGFHVTPVLGRI-APEALDTLRVTPEVAQIITPTLAELRAV 150 (194)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCGGGCEEEEECCCEEE-TTTEEEEEEEEEE-CGGGGGGCCCCTTEEEEECCBHHHHHHS
T ss_pred CCCCCCHHHHHHHHHHHHHCCCccceEEEEEccCccC-CCCeEEEEEEEEe-cCCccccCCCccceeEEEEEEHHHhccC
Confidence 4678999999999999999999975 3332222222 2345556666543 2221101234579999999999999 76
Q ss_pred Cch
Q psy13065 79 SRK 81 (114)
Q Consensus 79 ~~~ 81 (114)
...
T Consensus 151 ~~~ 153 (194)
T 1nqz_A 151 PLV 153 (194)
T ss_dssp CCE
T ss_pred CCc
Confidence 554
No 44
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.00 E-value=1.8e-10 Score=79.97 Aligned_cols=75 Identities=11% Similarity=0.038 Sum_probs=49.0
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceee-eeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYL-ETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~-~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
.+..||+.+||+||++||||+++.. +.....+. ..........+|.+.. .+. ..+ ..+|+.+++|+++++++.
T Consensus 72 ve~gEs~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~~~~~~f~~~~-~~~--~~~-~~~E~~~~~W~~~~el~~ 147 (171)
T 1q27_A 72 VQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTTLSSFMCVYELRS-DAT--PIF-NPNDISGGEWLTPEHLLA 147 (171)
T ss_dssp CSSSSCHHHHHHHHHHHHHSCTTSSSCEEEEEEECSSSSCCSSEEEEEEEEC-CCC--CCS-CTTTCSCCEEECHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHCCcccccceEEEEEEeccCCCCccEEEEEEEEE-CCc--ccc-CchhhheEEEecHHHHHH
Confidence 4678999999999999999999875 22222222 2222223555565543 222 222 347899999999999985
Q ss_pred Cc
Q psy13065 79 SR 80 (114)
Q Consensus 79 ~~ 80 (114)
+.
T Consensus 148 ~~ 149 (171)
T 1q27_A 148 RI 149 (171)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 45
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=98.99 E-value=9.5e-10 Score=76.75 Aligned_cols=78 Identities=13% Similarity=0.136 Sum_probs=48.3
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeec-ce-eeeecc------------CCeEEEEEEEeccCCCCccC--cCCcC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAE-DS-YLETTY------------NDQLTRLYLIPGVPIDFKFA--PQTRG 63 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~-~~-y~~~~~------------~~~~~~lfv~~~~~~~~~~~--p~~~~ 63 (114)
++..||+.+||+||++||||+++.. +++. .. +.+... .++...+|++.......... +...+
T Consensus 40 ~e~gE~~~~aa~RE~~EE~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~ 119 (164)
T 2kdv_A 40 INPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTP 119 (164)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCGGGEEEEEECSSCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSC
T ss_pred cCCCCCHHHHHHHHHHHHHCCCccceEEEEEecceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCc
Confidence 4678999999999999999999874 3332 11 111111 11245556654333222222 22346
Q ss_pred cccceEEEeCCCCCCC
Q psy13065 64 EIKACQWFPIGDLPSS 79 (114)
Q Consensus 64 EI~~i~Wf~id~lp~~ 79 (114)
|+.+++|+++++++..
T Consensus 120 E~~~~~W~~~~e~~~~ 135 (164)
T 2kdv_A 120 EFDGWRWVSYWYPVRQ 135 (164)
T ss_dssp SEEEEEEEETTTGGGG
T ss_pred hhceEEEecHHHhhhh
Confidence 9999999999998654
No 46
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=98.98 E-value=5.1e-10 Score=74.68 Aligned_cols=73 Identities=12% Similarity=0.088 Sum_probs=46.6
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeeccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++||||+++.. +++. +.+.....+ .+.+|.+....+ .+ ..+|+.++.|+++++++.
T Consensus 44 ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~-~~~e~~~~~W~~~~el~~ 116 (140)
T 2rrk_A 44 VEPDESQRQALVRELREELGIEATVGEYVAS--HQREVSGRIIHLHAWHVPDFHG----TL-QAHEHQALVWCSPEEALQ 116 (140)
T ss_dssp CCTTSCHHHHHHHHHHHHSCEEEECCEEEEE--EEEEETTEEEEEEEEEESEEEE----CC-CCSSCSCEEEECHHHHTT
T ss_pred cCCCCCHHHHHHHHHHHHHCCeeecccEEEE--EEEecCCcEEEEEEEEEEeeCC----Cc-CCCccceeEEeCHHHHhh
Confidence 4678999999999999999999975 2322 111122222 234444432211 12 246889999999999887
Q ss_pred Cch
Q psy13065 79 SRK 81 (114)
Q Consensus 79 ~~~ 81 (114)
+..
T Consensus 117 ~~~ 119 (140)
T 2rrk_A 117 YPL 119 (140)
T ss_dssp SCC
T ss_pred CCC
Confidence 643
No 47
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=98.98 E-value=3.7e-10 Score=80.86 Aligned_cols=79 Identities=11% Similarity=0.043 Sum_probs=48.4
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeee-eccCCeEEEEEEEeccCCCCcc-CcCCcCcccceEEEeCCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLE-TTYNDQLTRLYLIPGVPIDFKF-APQTRGEIKACQWFPIGDLPSS 79 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~-~~~~~~~~~lfv~~~~~~~~~~-~p~~~~EI~~i~Wf~id~lp~~ 79 (114)
.+ .||+.+||+||++||||+++..+.....+.. .......+++|++......... .....+|+.++.|+++++++.+
T Consensus 88 ve-gE~~~~aa~REl~EEtG~~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 166 (191)
T 3o6z_A 88 LD-NDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEM 166 (191)
T ss_dssp CC-SSCHHHHHHHHHHHHC-CCCSCEEEEEEEESCTTTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHH
T ss_pred eC-CCCHHHHHHHHHHHHhCCccCcEEEEEEEEeCCCccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHH
Confidence 46 8999999999999999999975322122221 1122345677777654321110 0112579999999999998876
Q ss_pred ch
Q psy13065 80 RK 81 (114)
Q Consensus 80 ~~ 81 (114)
..
T Consensus 167 ~~ 168 (191)
T 3o6z_A 167 IK 168 (191)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 48
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=98.98 E-value=6.1e-10 Score=80.76 Aligned_cols=80 Identities=13% Similarity=0.115 Sum_probs=50.5
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecce-eeeeccCCeEEEEEEEe-ccCCCC----ccCcCCcCcccceEEEeCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDS-YLETTYNDQLTRLYLIP-GVPIDF----KFAPQTRGEIKACQWFPIGD 75 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~-y~~~~~~~~~~~lfv~~-~~~~~~----~~~p~~~~EI~~i~Wf~id~ 75 (114)
++..||+.+||+||++|||||++........ +..........++|++. ...... .. ....+|+.++.|+++++
T Consensus 101 ve~gEs~~~aA~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~E~~~~~w~~~~e 179 (212)
T 2dsc_A 101 IDDGETPEAAALRELEEETGYKGDIAECSPAVCMDPGLSNCTIHIVTVTINGDDAENARPKP-KPGDGEFVEVISLPKND 179 (212)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCCEEEEECCCEESCTTTBCCEEEEEEEEEETTSGGGSSCCC-CCCTTCCCEEEEEEGGG
T ss_pred cCCCCCHHHHHHHHHHHHhCCCccceEEeccEEcCCCccCceEEEEEEEEeCccccccCCCC-CCCCCceEEEEEEEHHH
Confidence 5778999999999999999999875321111 21111123445566553 221110 11 12357999999999999
Q ss_pred CCCCchh
Q psy13065 76 LPSSRKE 82 (114)
Q Consensus 76 lp~~~~~ 82 (114)
++.+..+
T Consensus 180 l~~~~~~ 186 (212)
T 2dsc_A 180 LLQRLDA 186 (212)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9877653
No 49
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=98.97 E-value=6.6e-10 Score=82.00 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=48.4
Q ss_pred ccc-CCCHHHHHHHHhhhhhCcee--eeeeecceeee-eccCCeEEEEEEEeccCCC---CccCcCCcCcccceEEEeCC
Q psy13065 2 MEE-IMMNIISEAKQVLEETGFDS--SHLIAEDSYLE-TTYNDQLTRLYLIPGVPID---FKFAPQTRGEIKACQWFPIG 74 (114)
Q Consensus 2 ~~~-~es~~eaAvREv~EETGl~v--~~li~~~~y~~-~~~~~~~~~lfv~~~~~~~---~~~~p~~~~EI~~i~Wf~id 74 (114)
++. .||+.+||+||++||||+++ ..+.....+.. .......+++|++...... ........+|+.++.|++++
T Consensus 104 ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~d~~E~~ev~wv~l~ 183 (218)
T 3q91_A 104 VDQPGLSLEEVACKEAWEECGYHLAPSDLRRVATYWSGVGLTGSRQTMFYTEVTDAQRSGPGGGLVEEGELIEVVHLPLE 183 (218)
T ss_dssp CCSSSCCHHHHHHHHHHHHHCBCCCGGGCEEEEEEEEC---CCEEEEEEEEEECGGGBCC---------CCEEEEEEEGG
T ss_pred eCCCCCCHHHHHHHHHHHHhCCccccCceEEEEEEecCCCccceEEEEEEEEECCcccccCCCCCCCCCcEEEEEEEEHH
Confidence 456 89999999999999999999 44332222322 2223455677776532111 00112235699999999999
Q ss_pred CCCCCch
Q psy13065 75 DLPSSRK 81 (114)
Q Consensus 75 ~lp~~~~ 81 (114)
++..+..
T Consensus 184 el~~~i~ 190 (218)
T 3q91_A 184 GAQAFAD 190 (218)
T ss_dssp GHHHHHH
T ss_pred HHHHHHH
Confidence 9887654
No 50
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=98.96 E-value=1.3e-10 Score=84.05 Aligned_cols=80 Identities=16% Similarity=0.253 Sum_probs=45.3
Q ss_pred cc-cCCCHHHHHHHHhhhhhCceeeeeeeccee-eeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCC
Q psy13065 2 ME-EIMMNIISEAKQVLEETGFDSSHLIAEDSY-LETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSS 79 (114)
Q Consensus 2 ~~-~~es~~eaAvREv~EETGl~v~~li~~~~y-~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~ 79 (114)
++ ..||+.+||+||++||||+++..+.....+ .......+.+.+|++..............+|+.++.|+++++++.+
T Consensus 79 ve~~gEs~~~aa~REl~EEtGl~~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~ 158 (207)
T 1mk1_A 79 LDVAGEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARR 158 (207)
T ss_dssp CCSTTCCHHHHHHHHHHHHHCEEEEEEEEEEEECSCTTTBCCCEEEEEEEEEEECCC----------CEEEEEHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHCCcccccEEEEEEEcCCCccccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHH
Confidence 45 789999999999999999999863211122 1111112345666665433221111123578999999999998876
Q ss_pred ch
Q psy13065 80 RK 81 (114)
Q Consensus 80 ~~ 81 (114)
..
T Consensus 159 ~~ 160 (207)
T 1mk1_A 159 VL 160 (207)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 51
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=98.96 E-value=1.9e-10 Score=83.57 Aligned_cols=80 Identities=10% Similarity=-0.080 Sum_probs=49.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeee-eccCCeEEEEEEEeccCCCCcc--CcCCcCcccceEEEeCCCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLE-TTYNDQLTRLYLIPGVPIDFKF--APQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~-~~~~~~~~~lfv~~~~~~~~~~--~p~~~~EI~~i~Wf~id~lp~ 78 (114)
++..||+.+||+||++|||||++..+.....+.. .......+++|++......... ...+.+|+.++.|+++++++.
T Consensus 99 ve~gE~~~~aA~REl~EEtGl~~~~~~~l~~~~~~~g~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~ 178 (209)
T 1g0s_A 99 IEEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQ 178 (209)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCCCCEEEEEEEESCTTTBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHcCcccCcEEEeEEEecCCCccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHH
Confidence 5778999999999999999999975322112211 1112345677776532111111 122456888999999999887
Q ss_pred Cch
Q psy13065 79 SRK 81 (114)
Q Consensus 79 ~~~ 81 (114)
+..
T Consensus 179 ~i~ 181 (209)
T 1g0s_A 179 WVE 181 (209)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 52
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=98.96 E-value=4.9e-10 Score=75.42 Aligned_cols=75 Identities=15% Similarity=0.185 Sum_probs=46.9
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeec-ceeeeeccCCe----EEEEEEEeccCCCCccCcCCcCcccceEEEeCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAE-DSYLETTYNDQ----LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIG 74 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~-~~y~~~~~~~~----~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id 74 (114)
++..||+.+||+||++||||+++.. ++.. ..+........ ...+|.+..... .+...+|+.++.|++++
T Consensus 50 ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~e~~~~~W~~~~ 125 (148)
T 2azw_A 50 IEGTETKEEAIHREVLEELGISVEIGCYLGEADEYFYSNHRQTAYYNPGYFYVANTWRQ----LSEPLERTNTLHWVAPE 125 (148)
T ss_dssp CCTTCCHHHHHHHHHHHHHSEEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEE----CSSCC-CCSEEEEECHH
T ss_pred cCCCCCHHHHHHHHHHHHhCCeeEeeeEEEEEEEEEcCCCCCcceEEEEEEEEEEcCcC----CcCCCCceeeEEEeeHH
Confidence 4678999999999999999999985 3332 12222211221 234444432221 12234688999999999
Q ss_pred CCCCCc
Q psy13065 75 DLPSSR 80 (114)
Q Consensus 75 ~lp~~~ 80 (114)
+++.+.
T Consensus 126 el~~~~ 131 (148)
T 2azw_A 126 EAVRLL 131 (148)
T ss_dssp HHHHHB
T ss_pred HHHhhh
Confidence 998654
No 53
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=98.93 E-value=1e-09 Score=78.43 Aligned_cols=78 Identities=19% Similarity=0.233 Sum_probs=42.5
Q ss_pred cccCCCHHHHHHHHhhhhhCce-eeee---eecceeeee---ccCCe-------EEEEEEEeccCCCCccCcCCcCcccc
Q psy13065 2 MEEIMMNIISEAKQVLEETGFD-SSHL---IAEDSYLET---TYNDQ-------LTRLYLIPGVPIDFKFAPQTRGEIKA 67 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~-v~~l---i~~~~y~~~---~~~~~-------~~~lfv~~~~~~~~~~~p~~~~EI~~ 67 (114)
++..||+.+||+||++||||++ +... .....+... ...+. ....|++... .+....+ ..+|+.+
T Consensus 78 ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~E~~~ 155 (197)
T 3fcm_A 78 SDNEKDQLKVAIKELKEETGVKNPTPLLDKAFALDVLTVNGHIKRGKYVSSHLHLNLTYLIECS-EDETLML-KEDENSG 155 (197)
T ss_dssp CTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEEEEEEECCEEETTEEECCEEEEEEEEEEECC-TTSCCCC-CC----C
T ss_pred cCCCCCHHHHHHHHHHHHHCCCcccccCCCceEEEEeeecCccccCcccCCceeEEEEEEEEeC-CCcccCC-Ccccccc
Confidence 4678999999999999999998 5421 100111111 01111 1133444432 2222222 3479999
Q ss_pred eEEEeCCCCCCCch
Q psy13065 68 CQWFPIGDLPSSRK 81 (114)
Q Consensus 68 i~Wf~id~lp~~~~ 81 (114)
++|+++++++.+..
T Consensus 156 ~~W~~~~el~~~~~ 169 (197)
T 3fcm_A 156 VMWIPFNEISKYCS 169 (197)
T ss_dssp EEEEEGGGHHHHCC
T ss_pred eEEccHHHHHhhcC
Confidence 99999999986543
No 54
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=98.93 E-value=1.7e-10 Score=80.38 Aligned_cols=77 Identities=17% Similarity=0.233 Sum_probs=44.9
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeee-ccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCc
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLET-TYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSR 80 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~-~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~ 80 (114)
++..||+.+||+||++||||+ +..+.....+... ........+|++...... .. ....+|+.++.|+++++++.+.
T Consensus 69 ve~gEs~~~aa~REl~EEtGl-~~~~~~l~~~~~~~~~~~~~~~~f~~~~~~~~-~~-~~~~~E~~~~~W~~~~el~~~~ 145 (170)
T 1v8y_A 69 IEPGEDPLEAARRELAEQTGL-SGDLTYLFSYFVSPGFTDEKTHVFLAENLKEV-EA-HPDEDEAIEVVWMRPEEALERH 145 (170)
T ss_dssp CCTTCCHHHHHHHHHHHHHSE-EEEEEEEEEEESCTTTBCCEEEEEEEEEEEEC-C---------CEEEEECHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHCC-CcCceeeEEEecCCCccccEEEEEEEEecccc-CC-CCCCCceEEEEEEEHHHHHHHH
Confidence 467899999999999999999 7653211122111 111234556666543211 11 1235789999999999988765
Q ss_pred h
Q psy13065 81 K 81 (114)
Q Consensus 81 ~ 81 (114)
.
T Consensus 146 ~ 146 (170)
T 1v8y_A 146 Q 146 (170)
T ss_dssp H
T ss_pred H
Confidence 4
No 55
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=98.92 E-value=8.3e-10 Score=78.28 Aligned_cols=75 Identities=12% Similarity=0.095 Sum_probs=49.0
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeee-ee--cceeeeeccCC---e-EEEEEEEeccCCCCccCcCCcCcccceEEEeCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHL-IA--EDSYLETTYND---Q-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIG 74 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~l-i~--~~~y~~~~~~~---~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id 74 (114)
++..||+.+||+||++||||+++..+ .. .-.|.....++ + ...+|++. +.+. ..+ ..+|+.+++|++++
T Consensus 70 ve~gEt~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-~~~~--~~~-~~~E~~~~~W~~~~ 145 (190)
T 1hzt_A 70 PQLGESNEDAVIRRCRYELGVEITPPESIYPDFRYRATDPSGIVENEVCPVFAAR-TTSA--LQI-NDDEVMDYQWCDLA 145 (190)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCBSCCEEEETTCEEEEECTTSCEEEEECCEEEEE-BCSC--CCC-CTTTEEEEEEECHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCchhhheeeeeEEEEeeCCCCCcceEEEEEEEEe-cCCC--CcC-CccceeeEEEecHH
Confidence 46789999999999999999999864 22 22232222222 2 23445444 3332 222 35799999999999
Q ss_pred CCCCCc
Q psy13065 75 DLPSSR 80 (114)
Q Consensus 75 ~lp~~~ 80 (114)
+++.+.
T Consensus 146 el~~~~ 151 (190)
T 1hzt_A 146 DVLHGI 151 (190)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 56
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=98.91 E-value=2.5e-10 Score=82.33 Aligned_cols=77 Identities=17% Similarity=0.148 Sum_probs=45.5
Q ss_pred cccCCCHHHHHHHHhhhhhCceeeeeeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCc
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSHLIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSR 80 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~ 80 (114)
++..||+.+||+||++||||+++........+. .........+|++. +.......+...++..+++||++++++.+.
T Consensus 75 ve~gEt~~eaa~REl~EEtGl~~~~~~~l~~~~-~~~~~~~~~~f~~~-~~~~~~~~~~~~e~~~~~~W~~~~el~~~l 151 (194)
T 2fvv_A 75 MEPEEEPSVAAVREVCEEAGVKGTLGRLVGIFE-NQERKHRTYVYVLI-VTEVLEDWEDSVNIGRKREWFKIEDAIKVL 151 (194)
T ss_dssp CCTTCCHHHHHHHHHHHHHCEEEEEEEEEEEEE-ETTTTEEEEEEEEE-EEEECSSCHHHHHHCCCEEEEEHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHhCCccccceEEEEEE-cCCCceEEEEEEEE-EccccCCCCCcccccceEEEEEHHHHHHHH
Confidence 477899999999999999999988521111121 12233445555543 221110000011234789999999988654
No 57
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=98.90 E-value=3.9e-10 Score=75.76 Aligned_cols=75 Identities=16% Similarity=0.131 Sum_probs=46.7
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee----eeec---cee--e----eeccCC---eEEEEEEEeccCCCCccCcCCcCcc
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH----LIAE---DSY--L----ETTYND---QLTRLYLIPGVPIDFKFAPQTRGEI 65 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~----li~~---~~y--~----~~~~~~---~~~~lfv~~~~~~~~~~~p~~~~EI 65 (114)
++..||+.+||+||++||||+++.. +++. ..| . ..+.++ ....+|.+.. ..+. +...+|+
T Consensus 43 ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~---~~~~~E~ 118 (150)
T 2o1c_A 43 VEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLAL-PHER---QIVFTEH 118 (150)
T ss_dssp CCTTCCHHHHHHHHHHHHHCCCHHHHTCCEEEEEEEEEEECCGGGGGGBCTTCCEEEEEEEEEEE-SSCC---CCCCSSS
T ss_pred cCCCCCHHHHHHHHHHHHhCCCccccceeEEeeeceeeeeeecccccccCCCCcceEEEEEEEEc-CCCC---CcChhHh
Confidence 4678999999999999999999874 2221 111 0 011211 2344454443 2221 1123789
Q ss_pred cceEEEeCCCCCCCc
Q psy13065 66 KACQWFPIGDLPSSR 80 (114)
Q Consensus 66 ~~i~Wf~id~lp~~~ 80 (114)
.+++|+++++++.+.
T Consensus 119 ~~~~W~~~~el~~~~ 133 (150)
T 2o1c_A 119 LAYKWLDAPAAAALT 133 (150)
T ss_dssp SCEEEEEHHHHHHHC
T ss_pred hccEeecHHHHHhhh
Confidence 999999999988654
No 58
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=98.90 E-value=7.1e-10 Score=86.39 Aligned_cols=80 Identities=18% Similarity=0.244 Sum_probs=48.1
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeeecc------------CCeEEEEEEEeccCCCC------ccC---
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLETTY------------NDQLTRLYLIPGVPIDF------KFA--- 58 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~~~------------~~~~~~lfv~~~~~~~~------~~~--- 58 (114)
++..||+.+||+||++||||+++.. ++....|..... ....+.+|++....+.. .+.
T Consensus 58 ve~gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~ 137 (364)
T 3fjy_A 58 LEQNETHRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVH 137 (364)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCCEEEEEEEEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCC
T ss_pred CCCCCCHHHHHHHHHHHHhCCeeeeccccceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccc
Confidence 4678999999999999999999875 333222222110 12335555554332210 011
Q ss_pred cCCcCcccceEEEeCCCCCCCch
Q psy13065 59 PQTRGEIKACQWFPIGDLPSSRK 81 (114)
Q Consensus 59 p~~~~EI~~i~Wf~id~lp~~~~ 81 (114)
....+|+.+++|+++++++.+..
T Consensus 138 ~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 138 RADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp CCCTTTCCEEEEEEHHHHHHHCS
T ss_pred cCCccceeeeecCcHHHHHHHhc
Confidence 12347999999999998876543
No 59
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=98.88 E-value=1.1e-09 Score=74.78 Aligned_cols=75 Identities=7% Similarity=0.029 Sum_probs=46.1
Q ss_pred cccCCCHHHHHHHHhhhhhCceee--e--eeecceeeeecc------CCeE-EEEEEEeccCCCCccCcCCcCcccceEE
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSS--H--LIAEDSYLETTY------NDQL-TRLYLIPGVPIDFKFAPQTRGEIKACQW 70 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~--~--li~~~~y~~~~~------~~~~-~~lfv~~~~~~~~~~~p~~~~EI~~i~W 70 (114)
++..||+.+||+||++||||+++. . +++...+..... ..+. ..+|.+.. ..+ ... ...+|+.+++|
T Consensus 53 ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~-~~~-~~~~e~~~~~W 129 (160)
T 1rya_A 53 VQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRV-SEE-ELL-LPDEQHDDYRW 129 (160)
T ss_dssp CCTTCCHHHHHHHHHHHHHSSCCCGGGSEEEEEEEEEESSBTTBSSSCEEEEEEEEEEEC-CGG-GCC-CCSSSEEEEEE
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCCcccceEEEEEeEEEcccccCCCcCcEEEEEEEEEEc-Ccc-ccc-cCCCccceEEE
Confidence 467899999999999999999964 2 333222222111 1132 34444432 221 111 23468999999
Q ss_pred EeCCCCCCC
Q psy13065 71 FPIGDLPSS 79 (114)
Q Consensus 71 f~id~lp~~ 79 (114)
+++++++.+
T Consensus 130 ~~~~el~~~ 138 (160)
T 1rya_A 130 LTSDALLAS 138 (160)
T ss_dssp ECHHHHHHC
T ss_pred ecHHHHhhc
Confidence 999998864
No 60
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.85 E-value=1.6e-09 Score=83.16 Aligned_cols=78 Identities=13% Similarity=0.150 Sum_probs=48.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--ee----ecceeeeecc--CCe-EEEEEEEeccCCCCccCcCCcCcccceEEEe
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LI----AEDSYLETTY--NDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFP 72 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li----~~~~y~~~~~--~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~ 72 (114)
++..||+.+||+||++||||+++.. ++ ....|..... .++ ...+|++....+.........+|+.+++|++
T Consensus 242 ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~ 321 (352)
T 2qjt_B 242 LECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWIS 321 (352)
T ss_dssp CCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEECCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEecCCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEec
Confidence 4778999999999999999999874 21 1111211111 122 3445555432222112223467999999999
Q ss_pred C-CCCCCC
Q psy13065 73 I-GDLPSS 79 (114)
Q Consensus 73 i-d~lp~~ 79 (114)
+ ++++.+
T Consensus 322 ~~~el~~~ 329 (352)
T 2qjt_B 322 LGSNIKNI 329 (352)
T ss_dssp SSHHHHHT
T ss_pred HHHHHHhh
Confidence 9 988864
No 61
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=98.82 E-value=3e-09 Score=73.09 Aligned_cols=25 Identities=24% Similarity=0.183 Sum_probs=23.0
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH 26 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~ 26 (114)
++..||+.+||+||++||||+++..
T Consensus 32 ve~gEs~~~aa~REl~EEtGl~~~~ 56 (156)
T 1k2e_A 32 VEHNETPIEAVKREFEEETGIVVEP 56 (156)
T ss_dssp CCTTCCHHHHHHHHHHHHHSEEEEE
T ss_pred cCCCCCHHHHHHHHHHHHHCCccee
Confidence 4678999999999999999999985
No 62
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.82 E-value=1.6e-09 Score=82.64 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=44.1
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eee----cceeeeec--cCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEe
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIA----EDSYLETT--YNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFP 72 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~----~~~y~~~~--~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~ 72 (114)
.|..||+.+||+||++||||+++.. +++ ...|.... ..++ ...+|++....+. .......+|+.+++|++
T Consensus 237 ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~~~e~~~~~W~~ 315 (341)
T 2qjo_A 237 IKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFDAPGRSLRGRTITHAYFIQLPGGE-LPAVKGGDDAQKAWWMS 315 (341)
T ss_dssp CCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEECCTTSCTTSCEEEEEEEEECCSSS-CCCCC------CEEEEE
T ss_pred CCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEeCCCCCCCCcEEEEEEEEEecCCC-cCccCCCCceeeEEEee
Confidence 4678999999999999999999884 221 11121111 1122 3455665432222 11223457999999999
Q ss_pred CCCCCCC
Q psy13065 73 IGDLPSS 79 (114)
Q Consensus 73 id~lp~~ 79 (114)
+++++.+
T Consensus 316 ~~el~~~ 322 (341)
T 2qjo_A 316 LADLYAQ 322 (341)
T ss_dssp HHHHHHT
T ss_pred HHHHhhh
Confidence 9999875
No 63
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=98.80 E-value=9.9e-10 Score=81.68 Aligned_cols=71 Identities=8% Similarity=0.040 Sum_probs=44.0
Q ss_pred CCCHHHHHHHHhhhhhCceeeeeeecceeee--eccCCeEE-EEEEEeccCCCCccCcCCcCcccceEEEeCCCCCC
Q psy13065 5 IMMNIISEAKQVLEETGFDSSHLIAEDSYLE--TTYNDQLT-RLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPS 78 (114)
Q Consensus 5 ~es~~eaAvREv~EETGl~v~~li~~~~y~~--~~~~~~~~-~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~ 78 (114)
.||+.+||+||++||||+++..+-....|.. ...++..+ ..|++. ++... ..+ ..+|+.+++|+++++++.
T Consensus 65 gEs~~~AA~REl~EEtGl~~~~~~~l~~~~~~~r~~~~~~~~~~y~a~-~~~~~-~~~-~~~e~~~~~W~~~~el~~ 138 (240)
T 3gz5_A 65 DESLEQTVLRKLAEKTAVVPPYIEQLCTVGNNSRDARGWSVTVCYTAL-MSYQA-CQI-QIASVSDVKWWPLADVLQ 138 (240)
T ss_dssp CSBHHHHHHHHHHHHHSSCCSEEEEEEEEEESSSSTTSCEEEEEEEEE-CCHHH-HHH-HHTTCTTEEEEEHHHHTT
T ss_pred CcCHHHHHHHHHHHHHCCCCCceeeEEEeCCCccCCCceEEEEEEEEE-ecccc-cCC-CCCcccceEEecHHHccc
Confidence 8999999999999999999874211112222 12233333 334433 22211 111 246899999999999973
No 64
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=98.78 E-value=5.1e-09 Score=79.12 Aligned_cols=72 Identities=18% Similarity=0.143 Sum_probs=45.0
Q ss_pred cccCCCHHHHHHHHhhhhhCceeee--eeecceeeee--ccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCC
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSSH--LIAEDSYLET--TYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDL 76 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~~--li~~~~y~~~--~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~l 76 (114)
++..||+.+||+||++||||+++.. +.....|... ...+. ...+|++. ++... ....+|+.+++|++++++
T Consensus 79 ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l~~~~~~~r~~~~~~~~~~y~a~-~~~~~---~~~~~E~~~~~W~~~~e~ 154 (273)
T 2fml_A 79 VNRNESTEDSVLRETKEETGVVISQENIEQLHSFSRPDRDPRGWVVTVSYLAF-IGEEP---LIAGDDAKEVHWFNLERH 154 (273)
T ss_dssp CCTTSCHHHHHHHHHHHHHCCCCCGGGEEEEEEECCTTSSTTSSEEEEEEEEE-CCCCC---CCCCTTEEEEEEEEEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCCcCcEEEEEEEcCCCCCCCceEEEEEEEEE-eCCCC---CCCCcceeeEEEEEhhHh
Confidence 4678999999999999999988763 2211222211 11223 33445443 33222 334579999999999964
Q ss_pred C
Q psy13065 77 P 77 (114)
Q Consensus 77 p 77 (114)
.
T Consensus 155 ~ 155 (273)
T 2fml_A 155 G 155 (273)
T ss_dssp T
T ss_pred h
Confidence 3
No 65
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.72 E-value=3.1e-08 Score=75.74 Aligned_cols=82 Identities=10% Similarity=0.002 Sum_probs=48.2
Q ss_pred cccCCCHHHHHHHHhhhhhCceee--------------eeeec-ce--eeee--ccCC----e-EEEEEEEeccCCCC--
Q psy13065 2 MEEIMMNIISEAKQVLEETGFDSS--------------HLIAE-DS--YLET--TYND----Q-LTRLYLIPGVPIDF-- 55 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl~v~--------------~li~~-~~--y~~~--~~~~----~-~~~lfv~~~~~~~~-- 55 (114)
++..||+.+||+||++||||+++. .+... .. |... .... . ...+|.+....+..
T Consensus 159 Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~ 238 (292)
T 1q33_A 159 VDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMD 238 (292)
T ss_dssp CCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTT
T ss_pred cCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEEEEeCCCcccc
Confidence 578899999999999999999831 12211 11 2211 1111 1 23334433211110
Q ss_pred ccCcCCcCcccceEEEeCCCCCCCchhh
Q psy13065 56 KFAPQTRGEIKACQWFPIGDLPSSRKEI 83 (114)
Q Consensus 56 ~~~p~~~~EI~~i~Wf~id~lp~~~~~~ 83 (114)
...++..+|+.+++||++++++.+..+.
T Consensus 239 ~~~~~~~~E~~~~~W~~~del~~L~~~h 266 (292)
T 1q33_A 239 NLMLEAGDDAGKVKWVDINDKLKLYASH 266 (292)
T ss_dssp TCCCCCCTTCSEEEEEECCTTCCCSTTH
T ss_pred ccccCCCCccceEEEEEcccCcccCHhH
Confidence 1123446799999999999999875443
No 66
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=98.71 E-value=1.1e-09 Score=80.97 Aligned_cols=74 Identities=14% Similarity=0.089 Sum_probs=45.9
Q ss_pred cccCCC------HHHHHHHHhhhhhCceeee--eeecceeee-eccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEe
Q psy13065 2 MEEIMM------NIISEAKQVLEETGFDSSH--LIAEDSYLE-TTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFP 72 (114)
Q Consensus 2 ~~~~es------~~eaAvREv~EETGl~v~~--li~~~~y~~-~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~ 72 (114)
+|..|| +.+||+||++||||+++.. +++...+.. .....+...+|.+... .+.++ ..|+.+++|++
T Consensus 107 VE~GEs~~p~EtleeAa~REl~EEtGl~v~~~~~ig~~~~~~~~~~~~~l~~~f~~~~~----~g~~~-~~E~~~~~W~~ 181 (211)
T 3e57_A 107 VREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLINSSTTEVSRVHLGALFLGRGK----FFSVK-EKDLFEWELIK 181 (211)
T ss_dssp CBGGGCSSHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCSSHHHHTEEEEEEEEEEE----EEEES-CTTTCEEEEEE
T ss_pred EeCCCCCCchhhHHHHHHHHHHHHhCCeeeccEEEEEEeccCCCCCeEEEEEEEEEEeC----CceeC-CCCeEEEEEEE
Confidence 455666 4999999999999999885 333211111 0011122334655532 23343 35778999999
Q ss_pred CCCCCCCc
Q psy13065 73 IGDLPSSR 80 (114)
Q Consensus 73 id~lp~~~ 80 (114)
+++|+.+.
T Consensus 182 ~~eL~~~~ 189 (211)
T 3e57_A 182 LEELEKFS 189 (211)
T ss_dssp HHHHHHHG
T ss_pred HHHHHHhH
Confidence 99998763
No 67
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=98.70 E-value=1.5e-08 Score=73.75 Aligned_cols=78 Identities=12% Similarity=0.038 Sum_probs=47.3
Q ss_pred cccCC-CHHHHHHHHhhhhhCceeeee--e---ecceeeeeccCCeEEEEEEEeccCCCCc------cC-cCCcCcccce
Q psy13065 2 MEEIM-MNIISEAKQVLEETGFDSSHL--I---AEDSYLETTYNDQLTRLYLIPGVPIDFK------FA-PQTRGEIKAC 68 (114)
Q Consensus 2 ~~~~e-s~~eaAvREv~EETGl~v~~l--i---~~~~y~~~~~~~~~~~lfv~~~~~~~~~------~~-p~~~~EI~~i 68 (114)
++..| |+.+||+||++||||+++... . ....+...+.....+++|++....+... .. ....+|+.++
T Consensus 75 ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~ 154 (212)
T 1u20_A 75 VDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHPQKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGL 154 (212)
T ss_dssp ECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTTSCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCCCcEEEEEEEEEecCCCcccccccccccccCCcceEEE
Confidence 46778 999999999999999998742 0 0111111122234455565543221110 00 0124688999
Q ss_pred EEEeCCCCCCC
Q psy13065 69 QWFPIGDLPSS 79 (114)
Q Consensus 69 ~Wf~id~lp~~ 79 (114)
.|+++++++..
T Consensus 155 ~wvpl~el~~~ 165 (212)
T 1u20_A 155 IRVPLYTLRDR 165 (212)
T ss_dssp EECCCSBCTTS
T ss_pred EEEEHHHhhhh
Confidence 99999999865
No 68
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.65 E-value=3e-08 Score=72.92 Aligned_cols=77 Identities=10% Similarity=0.069 Sum_probs=46.5
Q ss_pred cccCC-CHHHHHHHHhhhhhCceeee-eeecceeeee--ccCCeEEEEEEEeccCCCCc-------c-CcCCcCcccceE
Q psy13065 2 MEEIM-MNIISEAKQVLEETGFDSSH-LIAEDSYLET--TYNDQLTRLYLIPGVPIDFK-------F-APQTRGEIKACQ 69 (114)
Q Consensus 2 ~~~~e-s~~eaAvREv~EETGl~v~~-li~~~~y~~~--~~~~~~~~lfv~~~~~~~~~-------~-~p~~~~EI~~i~ 69 (114)
++..| |+.+||+||++||||+++.. .+..-.+... ....+.+.+|+.+.+..+.. . .....+|..++.
T Consensus 84 ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~l~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~ 163 (217)
T 2xsq_A 84 VDTQDRSLEDGLNRELREELGEAAAAFRVERTDYRSSHVGSGPRVVAHFYAKRLTLEELLAVEAGATRAKDHGLEVLGLV 163 (217)
T ss_dssp CCTTCSSHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEECSSSSEEEEEEEEECCHHHHHHHHHHGGGSTTBTTTEEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCCccceeEEEEEEeecCCCCCeEEEEEEEEEeccccceecccccccccccCCceeeEE
Confidence 46789 99999999999999999984 1211122221 11223444444444432111 0 111246889999
Q ss_pred EEeCCCCCC
Q psy13065 70 WFPIGDLPS 78 (114)
Q Consensus 70 Wf~id~lp~ 78 (114)
|++++++..
T Consensus 164 ~vPl~~l~d 172 (217)
T 2xsq_A 164 RVPLYTLRD 172 (217)
T ss_dssp ECCCSBCTT
T ss_pred EEEHHHhhh
Confidence 999999863
No 69
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=98.48 E-value=5.5e-08 Score=66.40 Aligned_cols=71 Identities=11% Similarity=0.108 Sum_probs=43.4
Q ss_pred ccCCCHH-HHHHHHhhhhhC-ceeee--eeecceeeeeccCCe-EEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCC
Q psy13065 3 EEIMMNI-ISEAKQVLEETG-FDSSH--LIAEDSYLETTYNDQ-LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLP 77 (114)
Q Consensus 3 ~~~es~~-eaAvREv~EETG-l~v~~--li~~~~y~~~~~~~~-~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp 77 (114)
+..|++. +||+||++|||| +++.. .+.... +...... .+.+|.+....+ .+. ..|..++.|+++++++
T Consensus 59 e~gE~~~~~a~~REl~EE~g~l~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~----~~~-~~e~~~~~W~~~~el~ 131 (155)
T 1x51_A 59 EPSEQLQRKALLQELQRWAGPLPATHLRHLGEVV--HTFSHIKLTYQVYGLALEGQ----TPV-TTVPPGARWLTQEEFH 131 (155)
T ss_dssp CSSHHHHHHHHHHHHHHHSCCCCSTTCEECCCBC--CBCSSCEEEEEEEEEECSSC----CCC-CCCCTTEEEEEHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCcceeeeeecceEE--EecCCccEEEEEEEEEEcCC----CCC-CCCCCccEEccHHHhh
Confidence 5678886 999999999999 87754 222111 1112222 344555543211 122 3567899999999887
Q ss_pred CCc
Q psy13065 78 SSR 80 (114)
Q Consensus 78 ~~~ 80 (114)
.+.
T Consensus 132 ~~~ 134 (155)
T 1x51_A 132 TAA 134 (155)
T ss_dssp HSC
T ss_pred hcC
Confidence 544
No 70
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=98.35 E-value=3.5e-07 Score=68.44 Aligned_cols=72 Identities=11% Similarity=0.130 Sum_probs=43.9
Q ss_pred CCH---HHHHHHHhhhhhCceeee-----e--eecceeeeeccCC----eEEEEEEEeccCCCCccCcCCcCcccceEEE
Q psy13065 6 MMN---IISEAKQVLEETGFDSSH-----L--IAEDSYLETTYND----QLTRLYLIPGVPIDFKFAPQTRGEIKACQWF 71 (114)
Q Consensus 6 es~---~eaAvREv~EETGl~v~~-----l--i~~~~y~~~~~~~----~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf 71 (114)
|++ .+||+||++||||+++.. + +..-.|......+ ....+|++.. .. ...+ ..+|+.+++|+
T Consensus 118 Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~-~~--~~~~-~~~Ev~~~~wv 193 (246)
T 2pny_A 118 KDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRK-NV--TLNP-DPSETKSILYL 193 (246)
T ss_dssp GGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEEC-CC--CCCC-CTTTEEEEEEE
T ss_pred ccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEE-CC--CCCC-ChHHeeEEEEE
Confidence 776 999999999999998652 1 2211222221111 1234455542 22 2233 25799999999
Q ss_pred eCCCCCCCch
Q psy13065 72 PIGDLPSSRK 81 (114)
Q Consensus 72 ~id~lp~~~~ 81 (114)
+++++.....
T Consensus 194 ~~eel~~~l~ 203 (246)
T 2pny_A 194 SQEELWELLE 203 (246)
T ss_dssp CHHHHHHHHH
T ss_pred eHHHHHHHHH
Confidence 9999876543
No 71
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=98.34 E-value=4.1e-07 Score=67.49 Aligned_cols=72 Identities=14% Similarity=0.187 Sum_probs=44.0
Q ss_pred CC---HHHHHHHHhhhhhCceeee-----e--eecceeeeeccCC----eEEEEEEEeccCCCCccCcCCcCcccceEEE
Q psy13065 6 MM---NIISEAKQVLEETGFDSSH-----L--IAEDSYLETTYND----QLTRLYLIPGVPIDFKFAPQTRGEIKACQWF 71 (114)
Q Consensus 6 es---~~eaAvREv~EETGl~v~~-----l--i~~~~y~~~~~~~----~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf 71 (114)
|| +.+||+||++||||+++.. + +..-.|......+ ....+|++.. .. ...+ ..+|+.+++|+
T Consensus 107 E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~-~~--~~~~-~~~Ev~~~~wv 182 (235)
T 2dho_A 107 SDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRM-NV--TLNP-DPNEIKSYCYV 182 (235)
T ss_dssp GGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEEC-CC--CCCC-CTTTEEEEEEE
T ss_pred ccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEE-CC--CCcC-ChHHEEEEEEE
Confidence 67 4999999999999998752 1 2211222221111 1234455542 22 2233 35799999999
Q ss_pred eCCCCCCCch
Q psy13065 72 PIGDLPSSRK 81 (114)
Q Consensus 72 ~id~lp~~~~ 81 (114)
+++++..+..
T Consensus 183 ~~~el~~~l~ 192 (235)
T 2dho_A 183 SKEELKELLK 192 (235)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 9999876543
No 72
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=98.33 E-value=4.8e-07 Score=69.88 Aligned_cols=77 Identities=17% Similarity=0.209 Sum_probs=47.9
Q ss_pred ccCCCHHHHHHHHhhhhhCceeee---ee--ecceeeeeccCC-e--EEEEEEEeccCCCCccCcCCcCcccceEEEeCC
Q psy13065 3 EEIMMNIISEAKQVLEETGFDSSH---LI--AEDSYLETTYND-Q--LTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIG 74 (114)
Q Consensus 3 ~~~es~~eaAvREv~EETGl~v~~---li--~~~~y~~~~~~~-~--~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id 74 (114)
+..||+.+||+||++||+|+.+.. +. +.-.|......+ + ...+|.+ .++.+....++ ++|+.+++|++++
T Consensus 160 ~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~G~~~E~~~vy~~-~l~~~~~p~~~-~~EV~~~~~v~~~ 237 (300)
T 3dup_A 160 PADLSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDL-ALPEDFRPHNT-DGEMADFMLWPAA 237 (300)
T ss_dssp CTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETTEEEEEEEEEEEE-ECCTTCCCCCT-TSSEEEEEEEEHH
T ss_pred CCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEEEecCCCeEEEEEEEEEE-EecCCCcCCCC-chHhheEEEECHH
Confidence 457999999999999999998753 11 112333332222 2 2233333 23433333343 5799999999999
Q ss_pred CCCCCch
Q psy13065 75 DLPSSRK 81 (114)
Q Consensus 75 ~lp~~~~ 81 (114)
++.....
T Consensus 238 El~~~l~ 244 (300)
T 3dup_A 238 KVVEAVR 244 (300)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8876544
No 73
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.32 E-value=7.7e-07 Score=69.79 Aligned_cols=70 Identities=9% Similarity=-0.082 Sum_probs=43.8
Q ss_pred ccCCCHHHHHHHHhhhhhCceeeeeeecceeeeeccCCeE-EEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCch
Q psy13065 3 EEIMMNIISEAKQVLEETGFDSSHLIAEDSYLETTYNDQL-TRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSRK 81 (114)
Q Consensus 3 ~~~es~~eaAvREv~EETGl~v~~li~~~~y~~~~~~~~~-~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~~ 81 (114)
+.. |+.+|++||++||||+++...-....+.+.+.+.+. +.+|.+. +.++ ..|..++.|+++++++.+..
T Consensus 277 e~g-t~~~al~REl~EE~Gl~v~~~~~l~~~~h~~~h~~~~~~~~~~~-~~~~-------~~e~~~~~Wv~~~el~~~~l 347 (369)
T 3fsp_A 277 DGA-DGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVFPGR-LVHG-------GPVEEPYRLAPEDELKAYAF 347 (369)
T ss_dssp SSS-CTHHHHHHHHTTSSSCCEEECCCCCEEEEECSSEEEEEEEEEEE-ECCS-------SCCCTTEEEEEGGGGGGSCC
T ss_pred CCC-CcHHHHHHHHHHHhCCceeeecccccEEEEcceEEEEEEEEEEE-EcCC-------CCCccccEEeeHHHhhhCCC
Confidence 345 899999999999999999852111122222222332 3334443 2221 35789999999999987543
No 74
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.13 E-value=1.6e-06 Score=67.29 Aligned_cols=64 Identities=11% Similarity=0.142 Sum_probs=40.8
Q ss_pred cCCCHHHHHHHHhhhhh-Cceeee--eeecceeeeeccCCeEEEEEEEeccCCCCccCcCCcCcccceEEEeCCCCCCCc
Q psy13065 4 EIMMNIISEAKQVLEET-GFDSSH--LIAEDSYLETTYNDQLTRLYLIPGVPIDFKFAPQTRGEIKACQWFPIGDLPSSR 80 (114)
Q Consensus 4 ~~es~~eaAvREv~EET-Gl~v~~--li~~~~y~~~~~~~~~~~lfv~~~~~~~~~~~p~~~~EI~~i~Wf~id~lp~~~ 80 (114)
..++..++|+||++||| |++|+. +++ .|-... ..+...+|.+....+ +..+++||++++||.+.
T Consensus 211 ~~~~~~~~a~RE~~EEttGl~v~~~~L~~--v~~~~~-~~~~~i~f~~~~~~g----------~~~e~~~f~~~elp~~~ 277 (321)
T 3rh7_A 211 VEGGDPARTLAAYLEQLTGLNVTIGFLYS--VYEDKS-DGRQNIVYHALASDG----------APRQGRFLRPAELAAAK 277 (321)
T ss_dssp ESSSCHHHHHHHHHHHHHSSCEEEEEEEE--EEECTT-TCCEEEEEEEEECSS----------CCSSSEEECHHHHTTCE
T ss_pred CCCChhHHHHHHHHHHhcCCEEeeceEEE--EEEcCC-CceEEEEEEEEeCCC----------CeeeeEEECHHHCCCcc
Confidence 35666679999999997 999995 332 122111 223233444443221 13889999999999884
No 75
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=97.51 E-value=0.00011 Score=54.49 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=16.4
Q ss_pred HHHHHHHHhhhhhCceee
Q psy13065 8 NIISEAKQVLEETGFDSS 25 (114)
Q Consensus 8 ~~eaAvREv~EETGl~v~ 25 (114)
..+||+||++||||+.+.
T Consensus 75 ~~~aAiRE~~EE~Gl~l~ 92 (232)
T 3qsj_A 75 LAVTALRETAEEIGWLLA 92 (232)
T ss_dssp HHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHHHHhCceec
Confidence 689999999999999875
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=95.87 E-value=0.0052 Score=45.21 Aligned_cols=24 Identities=4% Similarity=-0.151 Sum_probs=18.6
Q ss_pred cccCC-CHHHHHHHHhhhhhCc-eee
Q psy13065 2 MEEIM-MNIISEAKQVLEETGF-DSS 25 (114)
Q Consensus 2 ~~~~e-s~~eaAvREv~EETGl-~v~ 25 (114)
.|..| |+++|++||+.||+|+ .|.
T Consensus 63 Ve~gE~t~e~aL~REl~EElg~~~V~ 88 (214)
T 3kvh_A 63 VDRRFWSLEDGLNRVLGLGLGCLRLT 88 (214)
T ss_dssp ECTTTCCHHHHHHHSCCSCC---CCC
T ss_pred CCCCCCCHHHHHHHHHHHhhCCeeee
Confidence 35678 9999999999999997 455
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=90.49 E-value=0.15 Score=37.36 Aligned_cols=21 Identities=10% Similarity=-0.051 Sum_probs=18.9
Q ss_pred cccCCCHHHHHHHHhhhhhCc
Q psy13065 2 MEEIMMNIISEAKQVLEETGF 22 (114)
Q Consensus 2 ~~~~es~~eaAvREv~EETGl 22 (114)
+|..|++++|++||+.||.|.
T Consensus 92 le~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 92 LNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp CCTTCCHHHHHHHHHHHHHCC
T ss_pred cCCCCCHHHHHHHHHHHHhCC
Confidence 467899999999999999994
No 78
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=48.21 E-value=8.2 Score=22.04 Aligned_cols=14 Identities=14% Similarity=0.294 Sum_probs=11.1
Q ss_pred CCHHHHHHHHhhhh
Q psy13065 6 MMNIISEAKQVLEE 19 (114)
Q Consensus 6 es~~eaAvREv~EE 19 (114)
.|..=.|+|||+|-
T Consensus 38 qSdF~~aVREVYEh 51 (53)
T 1zl8_A 38 QSEFFGAVREVYET 51 (53)
T ss_dssp SCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45667899999985
No 79
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=30.81 E-value=25 Score=20.44 Aligned_cols=14 Identities=0% Similarity=0.102 Sum_probs=12.4
Q ss_pred HHHHhhhhhCceee
Q psy13065 12 EAKQVLEETGFDSS 25 (114)
Q Consensus 12 AvREv~EETGl~v~ 25 (114)
-+|++.||||..+.
T Consensus 26 ~I~~I~e~tg~~I~ 39 (71)
T 1vig_A 26 NINRIKDQYKVSVR 39 (71)
T ss_dssp HHHHHHHHTCCEEE
T ss_pred cHHHHHHHHCCEEE
Confidence 47999999999986
No 80
>2lic_A Vitellogenin; lipid transport; HET: SEP; NMR {Apis mellifera}
Probab=26.95 E-value=27 Score=17.73 Aligned_cols=29 Identities=24% Similarity=0.304 Sum_probs=17.2
Q ss_pred CCCCCchhhhhhhccCCCCCCCceEEEcc
Q psy13065 75 DLPSSRKEIKTVLINGTPVGTNAFFMIMP 103 (114)
Q Consensus 75 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (114)
++..+..++++.+-+-..+.-+.||.+-|
T Consensus 6 dilnlrtdistssssissseendfwqpkp 34 (35)
T 2lic_A 6 DILNLRTDISTSSSSISSSEENDFWQPKP 34 (35)
T ss_dssp CSSSCSSSSCSCSSCCSTTCSCSSCCCCC
T ss_pred HHHHhhhccccccccccccccccccCCCC
Confidence 45556666666553221356688888766
No 81
>2ctk_A Vigilin; K homology type I domain, RNA-binding, cell sterol metabolism, beta-alpha-alpha-beta-BETA-alpha structure, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=22.35 E-value=41 Score=21.10 Aligned_cols=16 Identities=13% Similarity=0.227 Sum_probs=13.3
Q ss_pred HHHHHhhhhhCceeee
Q psy13065 11 SEAKQVLEETGFDSSH 26 (114)
Q Consensus 11 aAvREv~EETGl~v~~ 26 (114)
.-+|++.||||..|..
T Consensus 37 ~~Ir~I~eetg~~I~I 52 (104)
T 2ctk_A 37 SGIRKMMDEFEVNIHV 52 (104)
T ss_dssp HHHHHHHHHTCCEEEC
T ss_pred hHHHHHHHHHCCEEEe
Confidence 3589999999999863
No 82
>2opv_A KHSRP protein; KH domain, RNA binding protein, KSRP; NMR {Homo sapiens}
Probab=20.96 E-value=46 Score=19.79 Aligned_cols=16 Identities=25% Similarity=0.254 Sum_probs=13.3
Q ss_pred HHHHHhhhhhCceeee
Q psy13065 11 SEAKQVLEETGFDSSH 26 (114)
Q Consensus 11 aAvREv~EETGl~v~~ 26 (114)
.-+|++.|+||..+..
T Consensus 34 ~~Ik~I~~~tga~I~i 49 (85)
T 2opv_A 34 ETIKQLQERAGVKMIL 49 (85)
T ss_dssp HHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHCCEEEE
Confidence 3589999999998864
Done!