Query psy13068
Match_columns 950
No_of_seqs 268 out of 822
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 18:38:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13068.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13068hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nut_A Protein transport prote 100.0 1E-108 4E-113 1002.8 44.0 583 192-949 5-672 (769)
2 1m2o_A SEC23, protein transpor 100.0 1E-108 3E-113 1004.5 42.5 577 201-949 5-674 (768)
3 3eh1_A Protein transport prote 100.0 1E-103 4E-108 954.7 45.9 540 197-946 32-659 (751)
4 3efo_B SEC24 related gene fami 100.0 9E-102 3E-106 941.6 40.5 543 200-949 42-677 (770)
5 3eh2_A Protein transport prote 100.0 4E-101 1E-105 935.4 41.4 539 202-948 40-672 (766)
6 1m2v_B SEC24, protein transpor 100.0 3.1E-98 1E-102 920.7 43.5 544 200-946 174-817 (926)
7 1pcx_A Protein transport prote 100.0 4E-98 1E-102 914.3 44.0 544 200-946 58-701 (810)
8 2nut_A Protein transport prote 100.0 1.9E-50 6.6E-55 491.9 -5.9 541 1-657 5-667 (769)
9 1m2o_A SEC23, protein transpor 100.0 6.5E-50 2.2E-54 487.5 -6.9 528 10-657 5-669 (768)
10 3eh1_A Protein transport prote 100.0 5.4E-40 1.9E-44 398.4 2.5 491 5-657 31-657 (751)
11 3efo_B SEC24 related gene fami 100.0 1.2E-38 4.2E-43 387.8 -5.0 512 5-657 38-672 (770)
12 3eh2_A Protein transport prote 100.0 5.9E-38 2E-42 381.6 -5.8 509 7-657 36-668 (766)
13 1m2v_B SEC24, protein transpor 100.0 3.5E-35 1.2E-39 361.7 -0.2 493 6-657 171-815 (926)
14 1pcx_A Protein transport prote 100.0 2.7E-35 9.2E-40 360.4 -2.4 492 7-657 56-699 (810)
15 2yrc_A Protein transport prote 99.5 5.2E-15 1.8E-19 124.0 1.6 55 244-298 4-58 (59)
16 2yrc_A Protein transport prote 99.3 1.9E-13 6.3E-18 114.6 1.8 44 54-100 5-48 (59)
17 1kcq_A Gelsolin, brevin, ADF, 95.6 0.012 4E-07 54.4 5.0 45 902-946 3-49 (104)
18 1svq_A Severin; actin-binding; 95.0 0.012 4.2E-07 55.2 3.2 46 901-946 12-59 (114)
19 2fh1_A Gelsolin; calcium, cont 93.3 0.061 2.1E-06 59.7 4.9 47 900-946 227-278 (344)
20 3fg7_A Villin-1; actin binding 93.1 0.069 2.4E-06 60.7 5.0 47 900-946 281-331 (398)
21 1j72_A Macrophage capping prot 92.9 0.077 2.6E-06 58.9 4.9 47 900-946 246-301 (347)
22 3fg6_A Adseverin, scinderin; C 92.3 0.098 3.3E-06 58.8 4.9 47 900-946 268-319 (371)
23 1d0n_A Horse plasma gelsolin; 89.6 0.24 8.4E-06 60.3 5.1 50 898-947 610-664 (729)
24 1j72_A Macrophage capping prot 83.1 0.82 2.8E-05 50.6 4.4 46 901-946 135-182 (347)
25 2fh1_A Gelsolin; calcium, cont 82.1 1 3.6E-05 49.8 4.7 46 901-946 124-173 (344)
26 3fg6_A Adseverin, scinderin; C 81.0 1.4 4.9E-05 49.4 5.4 46 901-946 165-215 (371)
27 1d0n_A Horse plasma gelsolin; 76.7 1.8 6.1E-05 52.8 4.8 46 901-946 133-180 (729)
28 3fg7_A Villin-1; actin binding 59.4 1.9 6.6E-05 48.8 0.0 46 901-946 178-227 (398)
29 2j9u_B VPS36, vacuolar protein 48.1 3.5 0.00012 35.9 -0.2 20 271-290 15-34 (76)
30 4b4t_W RPN10, 26S proteasome r 41.2 63 0.0021 34.5 8.1 39 680-718 125-163 (268)
31 3zqk_A VON willebrand factor; 34.2 16 0.00056 36.2 2.1 33 694-730 148-181 (199)
32 1ijb_A VON willebrand factor; 32.6 28 0.00095 34.6 3.5 54 319-375 1-66 (202)
33 1mjn_A Integrin alpha-L; rossm 27.3 24 0.00081 34.4 1.9 36 333-368 4-49 (179)
34 1n3y_A Integrin alpha-X; alpha 21.6 54 0.0018 31.9 3.3 39 334-375 12-60 (198)
No 1
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=100.00 E-value=1.3e-108 Score=1002.83 Aligned_cols=583 Identities=50% Similarity=0.839 Sum_probs=502.9
Q ss_pred chhhHHHHhhccCCCeeeeeccccCCCHHHHhhcccceEEEeccCCCCCCCCCCCCcccccccccccceeeccceEeCCC
Q psy13068 192 MTTYEEFFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKS 271 (950)
Q Consensus 192 ~~~~~~~~~~~e~~~~iR~t~~~~P~t~~~a~k~~~Plg~~~~Pl~~~~~~p~~~~~p~rC~~~~C~aylNP~~~~d~~g 271 (950)
|..|....+.+|+++|||+|||.||.++.+++++++|+|++|+||++.+++|+++++|+||++..|+|||||||++|.+|
T Consensus 5 ~~~~~~~~~~n~~~~~vR~T~n~~P~t~~~~~~~~lPlg~vi~P~~~~~~~p~v~~~pvRC~~~~CrayiNPf~~~~~~~ 84 (769)
T 2nut_A 5 MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVLNPLCQVDYRA 84 (769)
T ss_dssp --CHHHHHHHHHHHHSEEESBSSBCSSHHHHTTCSSCCEEEECTTCCCSCCCCBCSCCCBCSSTTCCCBCCTTSEEETTT
T ss_pred ccchhhhhcccCCCCcccceeccCCCChHHHhcccCCeEEEEeeCCCCCCCCcCCCCCCcCCCCCCCeEECCceEEeCCC
Confidence 33466666677899999999999999999999999999999999998888999999999998877999999999999999
Q ss_pred CeeEecCCCCCCCCchhhhhccccCCCCcccCCCceEEEEccCCCCCCCCCCCCcceeecccceEEEEcchhh-----hh
Q psy13068 272 KLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQFTTIEYTIPVSQCFPKYPLRSLPVFLPFLIQFVFFLAITH-----LI 346 (950)
Q Consensus 272 ~~w~C~~C~~~N~~p~~y~~i~d~~~~~El~~~~~tvEy~~p~~~~~p~~p~~~~pv~l~~~~~fviD~s~~~-----lk 346 (950)
++|+||||+.+|++|++|+.+.+.+.||||.|+++||||++|+++|.| |+|+ ||||+|..+ ++
T Consensus 85 ~~W~C~~C~~~N~~P~~Y~~~~~~~~~pEL~p~~~tvEy~~~~~~p~p-------p~~v-----FvIDvS~~a~~l~~l~ 152 (769)
T 2nut_A 85 KLWACNFCYQRNQFPPSYAGISELNQPAELLPQFSSIEYVVLRGPQMP-------LIFL-----YVVDTCMEDEDLQALK 152 (769)
T ss_dssp TEEECSSSCCEEECCGGGTTCBTTBCCGGGSGGGSSEEEEECSSCCCC-------CEEE-----EEEECCSCHHHHHHHH
T ss_pred CEEEccCCCCCCCCChHHccCCcccCChhhcCCCCcEEEEccCCCCCC-------CEEE-----EEEECCccHHHHHHHH
Confidence 999999999999999999988888899999888999999999988666 9999 999999943 44
Q ss_pred h--hcCCCCCCCCCeeeeEeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhhhccCCcCCCCCcceEEEee
Q psy13068 347 N--QVGSPNLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQFTTIEYTI 424 (950)
Q Consensus 347 ~--~~~l~~Lp~~~~vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 424 (950)
+ +..|+.||++++||||||| +.||+|++..+.|
T Consensus 153 ~si~~~L~~Lp~~~~VGlITf~---~~v~~y~l~~~~~------------------------------------------ 187 (769)
T 2nut_A 153 ESMQMSLSLLPPTALVGLITFG---RMVQVHELGCEGI------------------------------------------ 187 (769)
T ss_dssp HHHHHHHTTSCTTCEEEEEEES---SEEEEEESSCCSS------------------------------------------
T ss_pred HHHHHHHHhCCCCceEEEEEeC---CEEEEEeCCCCCC------------------------------------------
Confidence 4 6788999999999999999 9999999986443
Q ss_pred eccceeeeecccccceecccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhcccccccCCc
Q psy13068 425 PLLYSITYITENDNVIRRNEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIEDEEDQEDGN 504 (950)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~~~~d~~~~~ 504 (950)
+++|||.|.|+++.+|+.++.. ++.|. .|.
T Consensus 188 ------------------------------~~~~vf~G~k~~~~~q~~~ml~---v~d~~-------------~~~---- 217 (769)
T 2nut_A 188 ------------------------------SKSYVFRGTKDLSAKQLQEMLG---LSKVP-------------VTQ---- 217 (769)
T ss_dssp ------------------------------CEEEEEETTSCCCSHHHHHHHC----------------------------
T ss_pred ------------------------------ccceeecCCccccHHHHHHHhC---CCCcc-------------ccc----
Confidence 3456677888887776644311 00000 000
Q ss_pred hhhhHHHhhhhHHHHHhhcCCCCCCCCCCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCCCCCcccee
Q psy13068 505 EEIEDERETKMEEECQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLPHYSRFQFL 584 (950)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~g~~~~~~p~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~~~~~~~~l 584 (950)
. . .+ -+|+ |++|. +.||+|+++|++. |+++|++|+. |+|++
T Consensus 218 ---~-----~--------~~--~~~~--f~~p~--------------~~~lv~~~e~~~~---i~~lLe~L~~-~~~~~- 258 (769)
T 2nut_A 218 ---A-----T--------RG--PQVQ--QPPPS--------------NRFLQPVQKIDMN---LTDLLGELQR-DPWPV- 258 (769)
T ss_dssp -------------------------------CC--------------CSSSEEHHHHHHH---HHHHHHHCCC-CSSCC-
T ss_pred ---c-----c--------cc--cccc--CCCcc--------------cceeeeHHHHHHH---HHHHHHhccc-ccccc-
Confidence 0 0 00 0011 11221 6789999999877 9999999999 88988
Q ss_pred eeccCCCCCccccccccchHHHHHHHHhhcc----cccc-cccCCCCceEeccccccCCceeecccchhhhhhccCCCcc
Q psy13068 585 QVFNNSPDETSYYRHVLMREDLSQSLIMIQP----VLYS-YGFNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEEPI 659 (950)
Q Consensus 585 qvf~~s~~~~~~~r~~G~~~Al~~A~~ll~p----~~~~-~~f~gGp~~v~l~s~s~GPG~i~~~d~~~~~~~~~~~~~i 659 (950)
++++++.||+| +||++|+.+|+. .+++ ++|+||++ |.|||+|+.+++ ++++
T Consensus 259 ------~~~~~~~~a~G--~Al~~A~~lL~~~~~~~GGrI~~F~sg~p-------t~GpG~l~~r~~---------~~~~ 314 (769)
T 2nut_A 259 ------PQGKRPLRSSG--VALSIAVGLLECTFPNTGARIMMFIGGPA-------TQGPGMVVGDEL---------KTPI 314 (769)
T ss_dssp ------CTTBCCCCCHH--HHHHHHHHHHHHHSCSSCCEEEEEESSCC-------CSSSSCCSCSBT---------TSCC
T ss_pred ------cCCCCCccchH--HHHHHHHHHHhhcccCCCcEEEEEeCCCC-------CCCCCCCcCccc---------cccc
Confidence 77889999999 999999999993 2333 46666666 999999996654 6679
Q ss_pred ccccccccccchhhhhhHHHHHHHHHHHhhcccEEEEEeccCCCCCchhhhhhhhccCCCcEEEEcCCCCC---------
Q psy13068 660 RSHNDIHKGNNKYQKMATKHYEGLALRAAIVGHAIDIYSCALDQTGLLEMKLCCNATGKPSHVLIAIEFAQ--------- 730 (950)
Q Consensus 660 rs~~d~~k~~~~~~~pa~~FYk~LA~~~~~~gIsVDLF~~s~~~vdlatl~~L~~~TGG~~~v~~y~~F~~--------- 730 (950)
|+|.|++|+++++++++.+||++||++|+++||+||+|+++.+|+|++||+.|++.||| .+++|++|+.
T Consensus 315 rs~~d~~ke~~~~~~~a~~fY~~la~~~~~~gi~VDlF~~~~~~vdla~l~~l~~~TGG--~~~~~~~F~~~~~~~~l~~ 392 (769)
T 2nut_A 315 RSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKCCPNLTGG--YMVMGDSFNTSLFKQTFQR 392 (769)
T ss_dssp CCHHHHHTTCCTTHHHHHHHHHHHHHHHHHHTCEEEEEEECSSCCCHHHHTHHHHHSSC--CEEEESCSSSHHHHHHHHH
T ss_pred ccccccccchhhhccchHHHHHHHHHHHHHCCeEEEEEeccCCccChHHHHHHhhcCCc--eEEEcCCCchhhHHHHHHH
Confidence 99999999889999999999999999999999999999999999999999999999999 9999999976
Q ss_pred ---------------------CCCCeeEeeecCC--------------------C------------c----CCCCCC--
Q psy13068 731 ---------------------PSPMLKAQKRLGS--------------------T------------T----AAHGAP-- 751 (950)
Q Consensus 731 ---------------------~S~GlkV~~~~Gs--------------------T------------t----~~~de~-- 751 (950)
||+||+|+++||+ | + |+++++
T Consensus 393 ~~~~~~~~~l~~gf~a~mrVr~S~gl~v~~~~G~~~~~~~~~~~vsd~~~g~~~t~~~~l~~~~~d~s~~v~f~~~~~~~ 472 (769)
T 2nut_A 393 VFTKDMHGQFKMGFGGTLEIKTSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHN 472 (769)
T ss_dssp TTCBCTTSCBSCEEEEEEEEEECTTEEEEEEESSCEECCCCCTTBCSSCCSBCSCSEEEEEEECTTCCEEEEEEEC----
T ss_pred HHhhhcccccceEEEEEEEEEecCCeEEEeeeccccccccccCccccceeccCCCceEEeecCCCCCEEEEEEEecCccc
Confidence 9999999999984 1 0 455554
Q ss_pred --CCCCCceEEEEEEeeecCCCcEEEEEEeeeecccccCCCH---HHHHhccCHHHHHHHHHHHHHHHhhcCChHHHHHH
Q psy13068 752 --IPQGGRGCIQFITHYQAPSGEKKVRVTTIARNWADATTQL---DHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRW 826 (950)
Q Consensus 752 --L~~~~~~yIQ~AlLYT~~~GeRRIRV~Tl~l~~~pvts~l---~~v~~s~D~eAi~~llaR~av~~~~~~~l~d~r~~ 826 (950)
++++..+|||+|++||+++|+|||||||+++ |+++++ +++|+++|+||++++|+|+|+.+++++++.|+|+|
T Consensus 473 ~~l~~~~~~~~Q~a~lYt~~~G~rRiRV~T~~~---~~t~~~~~~~~v~~~~Dqea~~~llar~a~~~~~~~~~~d~~~~ 549 (769)
T 2nut_A 473 APIPQGGRGAIQFVTQYQHSSGQRRIRVTTIAR---NWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGPDVLRW 549 (769)
T ss_dssp ------CCEEEEEEEEEEETTSCEEEEEEEEEE---CBCCGGGHHHHHHHTBCHHHHHHHHHHHHHHHHTTC---CHHHH
T ss_pred cccCCCCeEEEEEEEEEECCCCCEEEEEEeecc---cccCCcccHHHHHHhcCHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 5566889999999999999999999999999 777776 59999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCccccCcccccHHHHHHHHHhcccccCCCCChhHHHHHHHHHcCCCHHhHHhccccceEE
Q psy13068 827 ADRTLIRLCQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRHVLMREDLSQSLIMIQPVLYS 906 (950)
Q Consensus 827 L~~~lv~il~~Yr~~~~~~~~qliLPesLklLP~yi~~LlKS~~Lr~~n~spDeR~~~~~~l~s~~v~~~l~~iYP~L~s 906 (950)
|++++++++++|+.|.++.+++|+||++||+||+|||+|+||++|++++++||||+|+++.++++++.+++.||||+||+
T Consensus 550 ld~~li~l~~~~~~Yrk~~~~sl~lp~~lkllP~~~~~L~ks~~l~~~~~spDer~~~~~~l~~~~~~~~~~~iyP~L~~ 629 (769)
T 2nut_A 550 LDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSSFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYA 629 (769)
T ss_dssp HHHHHHHHHHHHCBCCTTCGGGCBCCTTTTTHHHHHHHHHHSTTTCCTTSCHHHHHHHHHHHTTCCHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHHHHHHhCcCcccccccHHHHHHHHHHHHHhcccccCCCCCCccHHHHHHHHHHcCCHHHHHHhhcCEEEe
Confidence 99999999999999999889999999999999999999999999999899999999999999999999999999999999
Q ss_pred eccCCCCcccccccccccCCeEEEEECCCEEEEEEcCCCCCCC
Q psy13068 907 YGFNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSNARR 949 (950)
Q Consensus 907 lh~~g~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~~w~ 949 (950)
+|.+++|++++||.++|++|||||||+|++|+||+|++|++||
T Consensus 630 ~~~~~~P~~v~ls~~~l~~~gi~LLD~g~~i~i~~G~~v~~w~ 672 (769)
T 2nut_A 630 YSFSGPPEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWR 672 (769)
T ss_dssp ECSSSSCEECCSSGGGCCTTCEEEEECSSEEEEEECHHHHHHH
T ss_pred ccCCCCCCceeCCHHHccCCCEEEEECCCEEEEEECCcchHHH
Confidence 9987889999999999999999999999999999999999997
No 2
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=100.00 E-value=9.6e-109 Score=1004.46 Aligned_cols=577 Identities=39% Similarity=0.646 Sum_probs=497.7
Q ss_pred hccCCCeeeeeccccCCCHHHHhhcccceEEEeccCCCCCCCCCCCCcccccccccccceeeccceEeCCCCeeEecCCC
Q psy13068 201 QNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCF 280 (950)
Q Consensus 201 ~~e~~~~iR~t~~~~P~t~~~a~k~~~Plg~~~~Pl~~~~~~p~~~~~p~rC~~~~C~aylNP~~~~d~~g~~w~C~~C~ 280 (950)
+.|+++|||+|||.||.++.+++++++|+|++|+||++.+++|+++++|+||++..|+|||||||++|.+|++|+||||+
T Consensus 5 ~~~~~~~vR~T~n~~P~t~~~~~~~~lPlg~vi~P~~~~~~~p~v~~~pvRC~~~~CrayiNPf~~~~~~~~~W~C~~C~ 84 (768)
T 1m2o_A 5 TNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHCKSILNPYCVIDPRNSSWSCPICN 84 (768)
T ss_dssp HHHHHHSEEESBSEEESSHHHHHHTCSCSEEEECTTCCCTTCCEECSCCCBCCSTTTCCBCCTTSCEETTTTEECCTTTC
T ss_pred cccCcCceEeeeccCCCCHHHHhcCCCCeEEEEEeCCCCCCCCcCCCCCCccCCCCCCeEECCceEEeCCCCEEEcccCC
Confidence 47889999999999999999999999999999999998878899999999998877999999999999999999999999
Q ss_pred CCCCCchhhhhccccCCCCcccCCCceEEEEccCCCCCCCCCCCCcceeecccceEEEEcchhh-----hhh--hcCCCC
Q psy13068 281 QRNAFPPQYAAITEQHQPAELHPQFTTIEYTIPVSQCFPKYPLRSLPVFLPFLIQFVFFLAITH-----LIN--QVGSPN 353 (950)
Q Consensus 281 ~~N~~p~~y~~i~d~~~~~El~~~~~tvEy~~p~~~~~p~~p~~~~pv~l~~~~~fviD~s~~~-----lk~--~~~l~~ 353 (950)
.+|++|++|+.+.+.+.|||| +++||||++|...+.| |+|+ ||||+|..+ +++ +.+|+.
T Consensus 85 ~~N~~P~~y~~~~~~~~~pEL--~~~tvEy~~p~~~~~p-------p~~v-----FvIDvs~~~~~l~~l~~sl~~~L~~ 150 (768)
T 1m2o_A 85 SRNHLPPQYTNLSQENMPLEL--QSTTIEYITNKPVTVP-------PIFF-----FVVDLTSETENLDSLKESIITSLSL 150 (768)
T ss_dssp CCCBCCGGGCC---CCCCGGG--TCSEEEEECSCCCCSC-------CEEE-----EEEECCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCChHHccCCcccCChhh--ccCCEEEECCCCCCCC-------CEEE-----EEEECCcCHHHHHHHHHHHHHHHHh
Confidence 999999999988788899999 6999999999876666 9999 999999943 444 678899
Q ss_pred CCCCCeeeeEeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhhhccCCcCCCCCcceEEEeeeccceeeee
Q psy13068 354 LPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQFTTIEYTIPLLYSITYI 433 (950)
Q Consensus 354 Lp~~~~vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 433 (950)
||++++||||||| +.||+|++..+.|++
T Consensus 151 Lp~~~~VGlITf~---~~V~~y~l~~~~~~~------------------------------------------------- 178 (768)
T 1m2o_A 151 LPPNALIGLITYG---NVVQLHDLSSETIDR------------------------------------------------- 178 (768)
T ss_dssp SCTTCEEEEEEES---SEEEECCCSSSSSEE-------------------------------------------------
T ss_pred CCCCCEEEEEEEC---CEEEEEECCCCCCcc-------------------------------------------------
Confidence 9999999999999 999999998655443
Q ss_pred cccccceecccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhcccccccCCchhhhHHHhh
Q psy13068 434 TENDNVIRRNEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIEDEEDQEDGNEEIEDERET 513 (950)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 513 (950)
.+||.|.|+++.+|+.++.- ++..++ ++.+... |.++
T Consensus 179 -----------------------~~V~~g~k~~~~~q~~~~l~--~l~~~~------~~~~~~~-~~~~----------- 215 (768)
T 1m2o_A 179 -----------------------CNVFRGDREYQLEALTEMLT--GQKPTG------PGGAASH-LPNA----------- 215 (768)
T ss_dssp -----------------------EEEEETTSCCCHHHHHHHHH--SCCCC------------------------------
T ss_pred -----------------------eeeecCCccccHHHHHHHHh--hccccc------cCCcccc-cccc-----------
Confidence 45556667777666654420 111110 0000000 0000
Q ss_pred hhHHHHHhhcCCCCCCCCCCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCCCCCccceeeeccCCCCC
Q psy13068 514 KMEEECQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLPHYSRFQFLQVFNNSPDE 593 (950)
Q Consensus 514 ~~~~~~~~~g~~~~~~p~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~~~~~~~~lqvf~~s~~~ 593 (950)
+ ..++| ...+.||+|++||++. |+++|++|++ ++|++ +++
T Consensus 216 ----------------~-f~p~~------------~~~~~~lv~l~e~~~~---i~~lL~~L~~-~~~~~-------~~~ 255 (768)
T 1m2o_A 216 ----------------M-NKVTP------------FSLNRFFLPLEQVEFK---LNQLLENLSP-DQWSV-------PAG 255 (768)
T ss_dssp --------------------CCS------------SSGGGGSEEHHHHHHH---HHHHHHTCCC-SCSCC-------CTT
T ss_pred ----------------c-ccccc------------CCccceeeeHHHHHHH---HHHHHHhccc-ccccc-------CCC
Confidence 0 01111 0126899999999877 9999999999 88988 778
Q ss_pred ccccccccchHHHHHHHHhhcc----cccc-cccCCCCceEeccccccCCceeecccchhhhhhccCCCccccccccccc
Q psy13068 594 TSYYRHVLMREDLSQSLIMIQP----VLYS-YGFNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEEPIRSHNDIHKG 668 (950)
Q Consensus 594 ~~~~r~~G~~~Al~~A~~ll~p----~~~~-~~f~gGp~~v~l~s~s~GPG~i~~~d~~~~~~~~~~~~~irs~~d~~k~ 668 (950)
+++.||+| +||++|..+|+. .+++ ++|++|++ |+|||+|+.+++ ++++|+|.|++|+
T Consensus 256 ~~~~~~~G--~Al~~A~~ll~~~~~~~GGrI~~F~sg~p-------t~GpG~l~~r~~---------~~~~rs~~d~~k~ 317 (768)
T 1m2o_A 256 HRPLRATG--SALNIASLLLQGCYKNIPARIILFASGPG-------TVAPGLIVNSEL---------KDPLRSHHDIDSD 317 (768)
T ss_dssp BCCCCCHH--HHHHHHHHHHHHHCTTSCCEEEEEESSCC-------CSSSSCCSCSBT---------TSCCCCHHHHHHT
T ss_pred CCCcccHH--HHHHHHHHHHhhccCCCCcEEEEEeCCCC-------CCCCcccccccc---------ccccccccccccc
Confidence 89999999 999999999983 2222 46666666 999999996654 6679999999998
Q ss_pred cchhhhhhHHHHHHHHHHHhhcccEEEEEeccCCCCCchhhhhhhhccCCCcEEEEcCCCCC------------------
Q psy13068 669 NNKYQKMATKHYEGLALRAAIVGHAIDIYSCALDQTGLLEMKLCCNATGKPSHVLIAIEFAQ------------------ 730 (950)
Q Consensus 669 ~~~~~~pa~~FYk~LA~~~~~~gIsVDLF~~s~~~vdlatl~~L~~~TGG~~~v~~y~~F~~------------------ 730 (950)
++++++++++||++||++|+++||+||+|+++.+|+|++||+.|++.||| .+++|++|+.
T Consensus 318 ~~~~~~~a~~fY~~la~~~~~~gi~VDlF~~~~~~~dla~l~~l~~~TGG--~v~~y~~f~~~~~~~~l~r~l~~~~~~~ 395 (768)
T 1m2o_A 318 HAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQLTDSTGG--VLLLTDAFSTAIFKQSYLRLFAKDEEGY 395 (768)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHTCEEEEEEECSSCCSHHHHHHHHHHHTC--CEEEESCTTSHHHHHHHHHTTCBCTTSS
T ss_pred hhhhcCchHHHHHHHHHHHHHCCeEEEEEEccCCccChHHHhhHhhcCCc--eEEEcCCCchHHHHHHHHHHHhhccccc
Confidence 88999999999999999999999999999999999999999999999999 9999999976
Q ss_pred ------------CCCCeeEeeecCC---------------------Cc----------------CCCCCCCC--------
Q psy13068 731 ------------PSPMLKAQKRLGS---------------------TT----------------AAHGAPIP-------- 753 (950)
Q Consensus 731 ------------~S~GlkV~~~~Gs---------------------Tt----------------~~~de~L~-------- 753 (950)
||+||+|+++||+ |+ |++++++.
T Consensus 396 ~~~gf~a~mrVr~S~gl~v~~~~G~~~~~~~~~~~~vsd~~ig~~~t~~~~l~~~~~d~t~~v~f~~~~~~~~~~~~~~~ 475 (768)
T 1m2o_A 396 LKMAFNGNMAVKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSA 475 (768)
T ss_dssp BSCEEEEEEEEEECTTEEEEEEESSCEECCSCCCSCBCSSCSSBCSCSEEEEEEECTTCCEEEEEEECCC----------
T ss_pred cceEEEEEEEEEecCCceEEEeecCccccccccccccCcceeccCCCceEEeecCCCCCEEEEEEEeccccccccccccc
Confidence 9999999999983 11 45555542
Q ss_pred -----CCCceEEEEEEeeecCCCcEEEEEEeeeecccccCCC-HHHHHhccCHHHHHHHHHHHHHHHhhcCChHHHHHHH
Q psy13068 754 -----QGGRGCIQFITHYQAPSGEKKVRVTTIARNWADATTQ-LDHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRWA 827 (950)
Q Consensus 754 -----~~~~~yIQ~AlLYT~~~GeRRIRV~Tl~l~~~pvts~-l~~v~~s~D~eAi~~llaR~av~~~~~~~l~d~r~~L 827 (950)
+...+|||+|++||+++|+|||||||+++ |++++ +.++|+++|+||++++|+|+|+.+++++++.|+|+||
T Consensus 476 ~l~~~~~~~~~iQ~a~lYt~~~G~rriRV~T~~~---~~t~~~~~~v~~~~Dqea~~~llar~av~~~~~~~~~d~r~~l 552 (768)
T 1m2o_A 476 PGSADRPHLAYTQFITTYQHSSGTNRIRVTTVAN---QLLPFGTPAIAASFDQEAAAVLMARIAVHKAETDDGADVIRWL 552 (768)
T ss_dssp -------CEEEEEEEEEEEETTTEEEEEEEEEEE---EEECTTCHHHHHTBCHHHHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred cccccCCCcEEEEEEEEEEcCCCCEEEEEEeecc---cccCccHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 46789999999999999999999999999 67765 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCCccccCcccccHHHHHHHHHhcccccCCCCChhHHHHHHHHHcCCCHHhHHhccccceEEe
Q psy13068 828 DRTLIRLCQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRHVLMREDLSQSLIMIQPVLYSY 907 (950)
Q Consensus 828 ~~~lv~il~~Yr~~~~~~~~qliLPesLklLP~yi~~LlKS~~Lr~~n~spDeR~~~~~~l~s~~v~~~l~~iYP~L~sl 907 (950)
++++++++++|+.|.++.+++|+||++||+||+|||+|+||++|++++++||||+|+++.++++++.+++.||||+||++
T Consensus 553 ~~~li~l~~~~~~Yrk~~~~~l~lp~~lk~lP~~~~~L~ks~~l~~~~~spDer~~~~~~l~~~~~~~~l~~iyP~L~~~ 632 (768)
T 1m2o_A 553 DRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQPTLTSF 632 (768)
T ss_dssp HHHHHHHHHHHSBCCTTCGGGCBCCTTTTHHHHHHHHHHHSTTTCCTTSCHHHHHHHHHHHTTSCHHHHHHHHSCEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHHHhcccccCCCCCChhHHHHHHHHHHcCCHHHHHHhhCCeEEEe
Confidence 99999999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcccccccccccCCeEEEEECCCEEEEEEcCCCCCCC
Q psy13068 908 GFNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSNARR 949 (950)
Q Consensus 908 h~~g~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~~w~ 949 (950)
|.+|+|++++||.++|++|||||||+|++|+||+|++|++||
T Consensus 633 ~~~~~P~~v~Ls~~~l~~~gi~LLD~g~~i~i~~G~~v~~~~ 674 (768)
T 1m2o_A 633 SMEDDPQPVLLDSISVKPNTILLLDTFFFILIYHGEQIAQWR 674 (768)
T ss_dssp CSSSCCEECCSBGGGCCTTCEEEEECSSEEEEEECHHHHHHH
T ss_pred cCCCCCcceeCcHHHcCCCCEEEEECCCEEEEEECCcchHHH
Confidence 988889999999999999999999999999999999999997
No 3
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=100.00 E-value=1.3e-103 Score=954.68 Aligned_cols=540 Identities=20% Similarity=0.307 Sum_probs=463.0
Q ss_pred HHHhhccCCCeeeeeccccCCCHHHHhhcccceEEEeccCCCCCCCCCCCC-cccccccccccceeeccceEeCCCCeeE
Q psy13068 197 EFFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQY-EPLLCMRNQCRAILNPLCQVDYKSKLWV 275 (950)
Q Consensus 197 ~~~~~~e~~~~iR~t~~~~P~t~~~a~k~~~Plg~~~~Pl~~~~~~p~~~~-~p~rC~~~~C~aylNP~~~~d~~g~~w~ 275 (950)
+..+.+.++++||+|||+||.++.+++++++|+|++|+||++.+++|++++ +|+||++ |+|||||||+| ..|++|+
T Consensus 32 ~~~~~n~~p~~~R~T~n~iP~t~~~~~~~~lPlg~~i~Pl~~~~~~P~v~~~~p~RC~r--CrayiNPf~~f-~~~~~w~ 108 (751)
T 3eh1_A 32 DLKKLNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRS--CRTYINPFVSF-IDQRRWK 108 (751)
T ss_dssp HHHHHSCCTTTEEESBSSEESSHHHHHHHCCCCEEEECTTCCCSCCCEECCSCCCBCTT--TCCBCCTTCEE-SSSSEEE
T ss_pred cccccCCCCCeEEeecccCCCCHHHHHhCCCCeEEEEecCCcCCCCCccCCCCCCcccC--ccCEeCCceEE-ecCCEEE
Confidence 344667789999999999999999999999999999999999888887665 5899999 99999999999 5689999
Q ss_pred ecCCCCCCCCchhhhh------ccccCCCCcccCCCceEEEEccCCCC-CCCCCCCCcceeecccceEEEEcchhhhhh-
Q psy13068 276 CNFCFQRNAFPPQYAA------ITEQHQPAELHPQFTTIEYTIPVSQC-FPKYPLRSLPVFLPFLIQFVFFLAITHLIN- 347 (950)
Q Consensus 276 C~~C~~~N~~p~~y~~------i~d~~~~~El~~~~~tvEy~~p~~~~-~p~~p~~~~pv~l~~~~~fviD~s~~~lk~- 347 (950)
||+|+.+|++|++|+. ..|.++|||| .++||||++|+++. .|+.| |+|+ ||||+|..++++
T Consensus 109 Cn~C~~~N~~P~~y~~~~~~~~~~d~~~rpEL--~~~tvEy~~p~~y~~r~p~p----p~yv-----FvIDvs~~a~~~g 177 (751)
T 3eh1_A 109 CNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEV--QNSTVEFIASSDYMLRPPQP----AVYL-----FVLDVSHNAVEAG 177 (751)
T ss_dssp CTTTCCEEECCGGGC---------CGGGSHHH--HCSEEEEEECGGGCSSSCCC----CEEE-----EEEECSHHHHHHT
T ss_pred cccccCCCCCCHHHhcccccccccCcccCchh--ccceEEEEcChhhhcCCCCC----cEEE-----EEEEccHhhhhhh
Confidence 9999999999999952 3577889999 59999999998752 12222 9999 999999966542
Q ss_pred ---------hcCCCCCCCCC--eeeeEeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhhhccCCcCCCCC
Q psy13068 348 ---------QVGSPNLPPLQ--YEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQ 416 (950)
Q Consensus 348 ---------~~~l~~Lp~~~--~vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (950)
+.+|+.||++. +||||||| +.||||++..+..
T Consensus 178 ~l~~~~~sl~~~L~~lp~~~~~~VG~ITfd---~~vh~y~l~~~~~---------------------------------- 220 (751)
T 3eh1_A 178 YLTILCQSLLENLDKLPGDSRTRIGFMTFD---STIHFYNLQEGLS---------------------------------- 220 (751)
T ss_dssp HHHHHHHHHHHHTTTSSCCTTCEEEEEEES---SSEEEEECCTTCS----------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCcCcEEEEEEeC---CEEEEEECCCCcc----------------------------------
Confidence 67899999875 99999999 9999999974310
Q ss_pred cceEEEeeeccceeeeecccccceecccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhcc
Q psy13068 417 FTTIEYTIPLLYSITYITENDNVIRRNEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIED 496 (950)
Q Consensus 417 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~~ 496 (950)
.|| |.+
T Consensus 221 -----------------------------------------------------------------~~q---------mlv 226 (751)
T 3eh1_A 221 -----------------------------------------------------------------QPQ---------MLI 226 (751)
T ss_dssp -----------------------------------------------------------------SCE---------EEE
T ss_pred -----------------------------------------------------------------cce---------eec
Confidence 011 111
Q ss_pred cccccCCchhhhHHHhhhhHHHHHhhcCCCCCCCCCCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCC
Q psy13068 497 EEDQEDGNEEIEDERETKMEEECQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLP 576 (950)
Q Consensus 497 ~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~ 576 (950)
..|.+| | ..++| .+||+|++||++. |+++|++||
T Consensus 227 v~dl~d---------------------------~-f~P~~---------------~~~lv~l~e~~~~---i~~lL~~Lp 260 (751)
T 3eh1_A 227 VSDIDD---------------------------V-FLPTP---------------DSLLVNLYESKEL---IKDLLNALP 260 (751)
T ss_dssp ESCTTC---------------------------T-TSCCG---------------GGTSEETTTTHHH---HHHHHHHGG
T ss_pred cccccc---------------------------c-CCCCh---------------hhhcccHHHHHHH---HHHHHHhhh
Confidence 122222 1 01222 4789999999877 999999998
Q ss_pred CCCccceeeeccCCCCCccccccccchHHHHHHHHhhcccccc-cccCCCCceEeccccccCCceeecccchhhhhhccC
Q psy13068 577 HYSRFQFLQVFNNSPDETSYYRHVLMREDLSQSLIMIQPVLYS-YGFNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHG 655 (950)
Q Consensus 577 ~~~~~~~lqvf~~s~~~~~~~r~~G~~~Al~~A~~ll~p~~~~-~~f~gGp~~v~l~s~s~GPG~i~~~d~~~~~~~~~~ 655 (950)
. +| ++++++.||+| +||++|..+|++.+++ ++|+||++ |+|||+|+.+++ .
T Consensus 261 ~--------~~---~~~~~~~~~~G--~AL~aA~~ll~~~GGrI~~F~sg~p-------t~GpG~l~~r~~--------~ 312 (751)
T 3eh1_A 261 N--------MF---TNTRETHSALG--PALQAAFKLMSPTGGRVSVFQTQLP-------SLGAGLLQSRED--------P 312 (751)
T ss_dssp G--------TS---TTCSCCCCCHH--HHHHHHHHHHTTTCEEEEEEECSCC-------CSSTTCCCCCCC--------S
T ss_pred H--------hh---cCCCCCccchH--HHHHHHHHHhhcCCCEEEEEecCCC-------CCCCCccccccc--------c
Confidence 6 34 45678899999 9999999999964444 56666666 999999996654 2
Q ss_pred CCccccccccccccchhhhhhHHHHHHHHHHHhhcccEEEEEeccCCCCCchhhhhhhhccCCCcEEEEcCCCCC-----
Q psy13068 656 EEPIRSHNDIHKGNNKYQKMATKHYEGLALRAAIVGHAIDIYSCALDQTGLLEMKLCCNATGKPSHVLIAIEFAQ----- 730 (950)
Q Consensus 656 ~~~irs~~d~~k~~~~~~~pa~~FYk~LA~~~~~~gIsVDLF~~s~~~vdlatl~~L~~~TGG~~~v~~y~~F~~----- 730 (950)
+ .|+|. +++++++++++||++||++|+++||+||+|+++.+|+|++||+.+++.||| .+++|++|+.
T Consensus 313 ~--~~~~~----ke~~~~~~a~~fY~~la~~~~~~~i~VDlF~~s~~~~dlatl~~l~~~TGG--~v~~y~~F~~~~~~~ 384 (751)
T 3eh1_A 313 N--QRSST----KVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAG--CIYYYPSFHYTHNPS 384 (751)
T ss_dssp C--GGGGS----SSCTTCSCSCSHHHHHHHHHHHTTEEEEEEECCSSCCCHHHHTHHHHTTTC--CEEECTTCBTTTBHH
T ss_pred c--cCCCc----hhhhhhcchHHHHHHHHHHHHhcCceEEEEEccCcccChHhHHHHHhhcCc--eEEEeCCcccccchh
Confidence 2 35542 346899999999999999999999999999999999999999999999999 9999999973
Q ss_pred --------------------------CCCCeeEeeecCC-----C------------c----CCCCCCCCCCCceEEEEE
Q psy13068 731 --------------------------PSPMLKAQKRLGS-----T------------T----AAHGAPIPQGGRGCIQFI 763 (950)
Q Consensus 731 --------------------------~S~GlkV~~~~Gs-----T------------t----~~~de~L~~~~~~yIQ~A 763 (950)
||+||+|+++||+ | + +++++++.++..+|||+|
T Consensus 385 ~~~~f~~dl~r~l~~~~gf~a~mrVR~S~glkv~~~~G~~~~~~t~~~~l~~i~~d~s~~v~~~~~~~l~~~~~~~~Q~a 464 (751)
T 3eh1_A 385 QAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTA 464 (751)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEEEEEEECTTEEEEEEESSSEECSSSEEEEEEECTTCCEEEEEEESSCCCSCSEEEEEEE
T ss_pred HHHHHHHHHHHHHhhhhccceEEEEEecCCeEEEEeeCCeEeCCCCceEeccCCCCCEEEEEEEEcCCCCCCCceEEEEE
Confidence 9999999999994 2 1 678899877789999999
Q ss_pred EeeecCCCcEEEEEEeeeecccccCCCHHHHHhccCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHhcccC
Q psy13068 764 THYQAPSGEKKVRVTTIARNWADATTQLDHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRWADRTLIRLCQKFGHYNK 843 (950)
Q Consensus 764 lLYT~~~GeRRIRV~Tl~l~~~pvts~l~~v~~s~D~eAi~~llaR~av~~~~~~~l~d~r~~L~~~lv~il~~Yr~~~~ 843 (950)
++||+++|+|||||||+++ |++++++++|+++|+||++++|||+|+++++++++.|+|+||+++|++++++||++++
T Consensus 465 llYT~~~G~RRiRV~T~~l---~vt~~~~~v~~~~DqeA~~~llar~av~~~~~~~l~d~r~~l~~~li~il~~Yr~~~~ 541 (751)
T 3eh1_A 465 LLYTSSKGERRIRVHTLCL---PVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVS 541 (751)
T ss_dssp EEEECTTSCEEEEEEEEEE---EEECSHHHHHHTBCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EeeecCCCCEEEEEEEecc---cccCCHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999 8899999999999999999999999999999999999999999999999999999997
Q ss_pred C-CCCccccCcccccHHHHHHHHHhccccc-CCCCChhHHHHHHHHHcCCCHHhHHhccccceEEec-c--------CC-
Q psy13068 844 D-DPHSFQLPENFQMYPQFMYHLRRSQFLQ-VFNNSPDETSYYRHVLMREDLSQSLIMIQPVLYSYG-F--------NG- 911 (950)
Q Consensus 844 ~-~~~qliLPesLklLP~yi~~LlKS~~Lr-~~n~spDeR~~~~~~l~s~~v~~~l~~iYP~L~slh-~--------~g- 911 (950)
+ .++||+||++||+||+||++|+||++|+ ++++++|||+|+++.++++++.+++.||||+||++| + ++
T Consensus 542 ~~~~~~l~lpe~lkllP~~~~~L~Ks~~~~~~~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~h~l~~~~~~~~~~~ 621 (751)
T 3eh1_A 542 NLQHSALMAPSSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDR 621 (751)
T ss_dssp -----CCEEEGGGTTHHHHHHHHHTSTTTCCSSCCCHHHHHHHHHHHHHSCHHHHHHHHSCEEEECTTCCSTTCEEETTE
T ss_pred cCCCccccCcHHHHHHHHHHHHHHccHhhcCCCCCChhHHHHHHHHHhCCCHHHHHhhccceEEEeecCccccCcccCCC
Confidence 5 6679999999999999999999999999 579999999999999999999999999999999999 3 22
Q ss_pred ---CCcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 912 ---PPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 912 ---~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
.|..++||.++|++|||||||+|++++||+|++|+
T Consensus 622 ~~~~P~~l~ls~~~l~~~giyLlD~g~~i~lw~G~~v~ 659 (751)
T 3eh1_A 622 IVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCD 659 (751)
T ss_dssp EECCCCCBCSSGGGCCTTSEEEEECSSEEEEEECTTCC
T ss_pred ccCCCCcccCCHHHcccCCEEEEECCCEEEEEECCCCC
Confidence 25667889999999999999999999999999987
No 4
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=100.00 E-value=8.6e-102 Score=941.57 Aligned_cols=543 Identities=18% Similarity=0.288 Sum_probs=462.9
Q ss_pred hhccCCCeeeeeccccCCCHHHHhhcccceEEEeccCCCCCC----CCCC---CCcccccccccccceeeccceEeCCCC
Q psy13068 200 YQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPD----LPPL---QYEPLLCMRNQCRAILNPLCQVDYKSK 272 (950)
Q Consensus 200 ~~~e~~~~iR~t~~~~P~t~~~a~k~~~Plg~~~~Pl~~~~~----~p~~---~~~p~rC~~~~C~aylNP~~~~d~~g~ 272 (950)
+.+.++++||+|||.||.++.+++++++|+|++|+||++..+ +|++ +++|+||++ |||||||||+|+++|+
T Consensus 42 ~gn~~p~~~R~T~n~iP~t~~l~~~~~lPlg~~i~Pl~~~~~~e~p~pvv~~~~~~pvRC~r--CrayiNPf~~f~~~g~ 119 (770)
T 3efo_B 42 QGNASPRFIRCTTYCFPCTSDMAKQAQIPLAAVIKPFATIPSNESPLYLVNHGESGPVRCNR--CKAYMCPFMQFIEGGR 119 (770)
T ss_dssp SSSCCTTTEEESBSEEESSHHHHHHHCCCCEEEECTTCCCCTTSCCCCEECCTTTCSCBCTT--TCCBSCTTCEEEGGGT
T ss_pred cCCCCCCeEEeecccCCCCHHHHHhCCCCeEEEEEcCCCCCcccCCCCcccCCCCCCCccCC--CCCCcCCceEEecCCC
Confidence 445579999999999999999999999999999999998652 4444 568999999 9999999999999999
Q ss_pred eeEecCCCCCCCCchhhhh-------ccccCCCCcccCCCceEEEEccCCCC---CCCCCCCCcceeecccceEEEEcch
Q psy13068 273 LWVCNFCFQRNAFPPQYAA-------ITEQHQPAELHPQFTTIEYTIPVSQC---FPKYPLRSLPVFLPFLIQFVFFLAI 342 (950)
Q Consensus 273 ~w~C~~C~~~N~~p~~y~~-------i~d~~~~~El~~~~~tvEy~~p~~~~---~p~~p~~~~pv~l~~~~~fviD~s~ 342 (950)
+|+||+|+.+|+||++|+. ..|.++||||. ++||||++|+++. .|+.| |+|+ ||||+|.
T Consensus 120 ~w~Cn~C~~~N~~P~~Y~~~l~~~g~r~d~~~rpEL~--~~tvEf~ap~eY~~~~~~p~p----p~y~-----FvIDvs~ 188 (770)
T 3efo_B 120 RYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELS--LGSYEYVATLDYCRKSKPPNP----PAFI-----FMIDVSY 188 (770)
T ss_dssp EEECTTTCCEEECCGGGCCCCCSSSCTTTGGGSHHHH--CSEEEEECCGGGSGGGSCCCC----CEEE-----EEEECSH
T ss_pred EEEeccccccCCCchHhhccccccccccccccCcccc--cCceeeecCHHHhccCCCCCC----cEEE-----EEEEcch
Confidence 9999999999999999963 23567899996 6999999998864 22233 9999 9999999
Q ss_pred hhhhh----------hcCCCCCCCC-------CeeeeEeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhh
Q psy13068 343 THLIN----------QVGSPNLPPL-------QYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAIT 405 (950)
Q Consensus 343 ~~lk~----------~~~l~~Lp~~-------~~vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 405 (950)
+++++ +.+|+.||++ ++||||||| +.||||++..+..
T Consensus 189 ~av~sg~l~~~~~sl~~~L~~lP~~~~~~~~~~~VG~ITfd---~~vh~y~l~~~~~----------------------- 242 (770)
T 3efo_B 189 SNIKNGLVKLICEELKTMLEKIPKEEQEETSAIRVGFITYN---KVLHFFNVKSNLA----------------------- 242 (770)
T ss_dssp HHHHTTHHHHHHHHHHHHGGGCCCCTTSSSCSCEEEEEEES---SSEEEEECCTTCS-----------------------
T ss_pred hhccchHHHHHHHHHHHHHHhCCccccccCccceEEEEEeC---CEEEEEeCCCccc-----------------------
Confidence 77654 5789999975 899999999 9999999964210
Q ss_pred hccCCcCCCCCcceEEEeeeccceeeeecccccceecccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCch
Q psy13068 406 EQHQPAELHPQFTTIEYTIPLLYSITYITENDNVIRRNEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQE 485 (950)
Q Consensus 406 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~ 485 (950)
+||
T Consensus 243 ----------------------------------------------------------------------------q~q- 245 (770)
T 3efo_B 243 ----------------------------------------------------------------------------QPQ- 245 (770)
T ss_dssp ----------------------------------------------------------------------------SCE-
T ss_pred ----------------------------------------------------------------------------Cce-
Confidence 011
Q ss_pred hhHHHhhhhcccccccCCchhhhHHHhhhhHHHHHhhcCCCCCCCCCCCCCccccccccccccccccccccccCCCCcch
Q psy13068 486 DEEMEEQRIEDEEDQEDGNEEIEDERETKMEEECQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDET 565 (950)
Q Consensus 486 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~ 565 (950)
|.+..|.+| + ..+++ ++||+|++||++.
T Consensus 246 --------~~vv~d~~d---------------------------~-f~P~~---------------~~~Lv~l~e~~~~- 273 (770)
T 3efo_B 246 --------MMVVTDVGE---------------------------V-FVPLL---------------DGFLVNYQESQSV- 273 (770)
T ss_dssp --------EEEECCTTS---------------------------C-CCCCS---------------SSSSBCTTTTHHH-
T ss_pred --------EEEeccccc---------------------------c-cCCCc---------------cceeeeHHHHHHH-
Confidence 111112211 1 01222 5789999999877
Q ss_pred HHHHHHHhhCCCCCccceeeeccCCCCCccccccccchHHHHHHHHhhcccccccccCCCCceEeccc-c-ccCCceeec
Q psy13068 566 SYYRTLLIHLPHYSRFQFLQVFNNSPDETSYYRHVLMREDLSQSLIMIQPVLYSYGFNGPPVPVLLDT-S-SIKPDCILL 643 (950)
Q Consensus 566 ~~i~~lL~~L~~~~~~~~lqvf~~s~~~~~~~r~~G~~~Al~~A~~ll~p~~~~~~f~gGp~~v~l~s-~-s~GPG~i~~ 643 (950)
|+++|++||. +|.+.. ....|+| +||++|+.+|+... .||++.++..+ + +.|||+|+.
T Consensus 274 --i~~lL~~L~~--------~~~~~~---~~~t~~g--~al~aa~~~l~~~~-----~GGkI~~F~s~lP~t~GpG~l~~ 333 (770)
T 3efo_B 274 --IHNLLDQIPD--------MFADSN---ENETVFA--PVIQAGMEALKAAD-----CPGKLFIFHSSLPTAEAPGKLKN 333 (770)
T ss_dssp --HHHHHHHHHH--------HHHTCC---CCCCCCH--HHHHHHHHHHHHHT-----CCEEEEEEECSCCCSSSTTCCCC
T ss_pred --HHHHHHhhHh--------hccCCC---CCcchHH--HHHHHHHHHhccCC-----CCcEEEEEecCCCCcCCCccccc
Confidence 9999999987 454332 3345666 99999999998321 34555333333 2 599999996
Q ss_pred ccchhhhhhccCCCccccccccccccchhhhhhHHHHHHHHHHHhhcccEEEEEeccCCCCCchhhhhhhhccCCCcEEE
Q psy13068 644 MDTFFQLLIFHGEEPIRSHNDIHKGNNKYQKMATKHYEGLALRAAIVGHAIDIYSCALDQTGLLEMKLCCNATGKPSHVL 723 (950)
Q Consensus 644 ~d~~~~~~~~~~~~~irs~~d~~k~~~~~~~pa~~FYk~LA~~~~~~gIsVDLF~~s~~~vdlatl~~L~~~TGG~~~v~ 723 (950)
+++ ++++|+ +|+ +++++++++||++||++|+++||+||+|+++.+|+|++||+.|+++||| .++
T Consensus 334 r~~---------~~~~~t----~ke-~~~~~~a~~fY~~lA~~~~~~~i~VDlF~~s~~~vdlatl~~l~~~TGG--~v~ 397 (770)
T 3efo_B 334 RDD---------KKLVNT----DKE-KILFQPQTNVYDSLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGG--TLY 397 (770)
T ss_dssp CCC---------CCCSSC----SCG-GGGGSCSSSHHHHHHHHHHHTTEEEEEEECCSSCCCHHHHTHHHHHTTC--CEE
T ss_pred ccc---------ccccCC----cch-hhhhcchHHHHHHHHHHHHHcCeEEEEEEecCCccChHHHHHHHhhcCc--eEE
Confidence 655 444554 333 5899999999999999999999999999999999999999999999999 999
Q ss_pred EcCCCCC----------------------------CCCCeeEeeecCC-----C------------c----CCCCCCCCC
Q psy13068 724 IAIEFAQ----------------------------PSPMLKAQKRLGS-----T------------T----AAHGAPIPQ 754 (950)
Q Consensus 724 ~y~~F~~----------------------------~S~GlkV~~~~Gs-----T------------t----~~~de~L~~ 754 (950)
+|++|+. ||+||+|+++||+ | + ++|++++.+
T Consensus 398 ~y~~F~~~~~~~~f~~dl~~~l~~~~gf~a~mrVR~S~gl~v~~~~G~~~~~~t~~~~l~~~~~d~s~~v~f~~~~~l~~ 477 (770)
T 3efo_B 398 KYNNFQMHLDRQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSE 477 (770)
T ss_dssp ECTTCCHHHHHHHHHHHHHHHHHSCEEEEEEEEEEECTTEEEEEEESSCBCSSSSCEEEEEEESSCCEEEEEEESSCCBT
T ss_pred EecCCcchhHHHHHHHHHHHhhhhceeeeEEEEEEecCCeEEEEeECCeeCCCCCceEecccCcCceEEEEEEecCCCCC
Confidence 9999984 9999999999994 2 1 788899987
Q ss_pred CCceEEEEEEeeecCCCcEEEEEEeeeecccccCCCHHHHHhccCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Q psy13068 755 GGRGCIQFITHYQAPSGEKKVRVTTIARNWADATTQLDHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRWADRTLIRL 834 (950)
Q Consensus 755 ~~~~yIQ~AlLYT~~~GeRRIRV~Tl~l~~~pvts~l~~v~~s~D~eAi~~llaR~av~~~~~~~l~d~r~~L~~~lv~i 834 (950)
+..+|||+|++||+.+|+|||||||+++ |+++++.++|+++|+||++++|+|+|+.+++++++.++|+.|.+.|+++
T Consensus 478 ~~~~~~Q~allYt~~~G~RRiRV~T~~l---~vt~~~~~v~~~~Dqea~~~llar~av~~~~~~~l~~~r~~L~~~~~~~ 554 (770)
T 3efo_B 478 DSGALIQCAVLYTTISGQRRLRIHNLGL---NCSSQLADLYKSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHM 554 (770)
T ss_dssp TTBEEEEEEEEEECTTCCEEEEEEEEEE---EEESCHHHHHHTBCHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEEEEcCCCCEEEEEEEech---hhcccHHHHHHhcCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999 8889999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccC--CCCCccccCcccccHHHHHHHHHhcccccC-CCCChhHHHHHHHHHcCCCHHhHHhccccceEEec-cC
Q psy13068 835 CQKFGHYNK--DDPHSFQLPENFQMYPQFMYHLRRSQFLQV-FNNSPDETSYYRHVLMREDLSQSLIMIQPVLYSYG-FN 910 (950)
Q Consensus 835 l~~Yr~~~~--~~~~qliLPesLklLP~yi~~LlKS~~Lr~-~n~spDeR~~~~~~l~s~~v~~~l~~iYP~L~slh-~~ 910 (950)
+..||++|+ ++++||+||++||+||+||++|+||++|+. +++++|||+|++++++++++.+++.||||+||++| ++
T Consensus 555 l~~Yrk~~~~~~s~~ql~Lp~~lkllP~~~~~L~Ks~~l~~~~~~s~Der~~~~~~l~~~~~~~~l~~iyP~L~~~h~l~ 634 (770)
T 3efo_B 555 LACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLD 634 (770)
T ss_dssp HHHHHHHTSCCCCTTEEEECGGGTTHHHHHHHHHHSGGGSCSSSSCHHHHHHHHHHHHHCCHHHHHHHHSCEEEECTTCC
T ss_pred HHHHHHhccCCCCccceecCHHHHHHHHHHHHHhCcHhhcCCCCCCccHHHHHHHHHHCCCHHHHHHhhccceEEEeccc
Confidence 999999984 367899999999999999999999999995 89999999999999999999999999999999999 42
Q ss_pred ----CCCcccccccccccCCeEEEEECCCEEEEEEcCCCCCCC
Q psy13068 911 ----GPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSNARR 949 (950)
Q Consensus 911 ----g~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~~w~ 949 (950)
+.|++++||.++|++|||||||+|++++||+|++|++|.
T Consensus 635 ~~~~~~P~~v~ls~~~l~~~giyLLD~g~~i~lw~G~~v~~~l 677 (770)
T 3efo_B 635 VKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPEL 677 (770)
T ss_dssp SSSCSCCCCCCSSGGGCCTTCEEEEECSSEEEEEECTTCCHHH
T ss_pred cccccCCCCcCCcHHHcCCCcEEEEECCcEEEEEecCCCCHHH
Confidence 358999999999999999999999999999999999885
No 5
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.9e-101 Score=935.38 Aligned_cols=539 Identities=18% Similarity=0.275 Sum_probs=459.3
Q ss_pred ccCCCeeeeeccccCCCHHHHhhcccceEEEeccCCCCCC----CCCC---CCcccccccccccceeeccceEeCCCCee
Q psy13068 202 NEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPD----LPPL---QYEPLLCMRNQCRAILNPLCQVDYKSKLW 274 (950)
Q Consensus 202 ~e~~~~iR~t~~~~P~t~~~a~k~~~Plg~~~~Pl~~~~~----~p~~---~~~p~rC~~~~C~aylNP~~~~d~~g~~w 274 (950)
+.++++||+|||.||.++.+++++++|+|++|+||++..+ +|++ +++|+||++ |||||||||+|+++|++|
T Consensus 40 n~~p~~~R~T~~~iP~t~~l~~~~~lPlg~~i~P~~~~~~~e~~~pvv~~~~~~pvRC~r--CrayiNPf~~f~~~g~~w 117 (766)
T 3eh2_A 40 NASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGESGPLRCNR--CKAYMCPFMQFIEGGRRF 117 (766)
T ss_dssp SCCTTTEEESBSEEESSHHHHHHHTCCEEEEECTTCCCCTTSCCCEEECCGGGCCCBCTT--TCCBCCTTCEEEGGGTEE
T ss_pred CCCCceEEcccccCCCCHHHHHhCCCCeEEEEecCCcCcccCCCCCeecCCCCCCCccCC--CCCEeCCceEEecCCCEE
Confidence 4468999999999999999999999999999999998643 3444 468999999 999999999999999999
Q ss_pred EecCCCCCCCCchhhhh-------ccccCCCCcccCCCceEEEEccCCCCC---CCCCCCCcceeecccceEEEEcchhh
Q psy13068 275 VCNFCFQRNAFPPQYAA-------ITEQHQPAELHPQFTTIEYTIPVSQCF---PKYPLRSLPVFLPFLIQFVFFLAITH 344 (950)
Q Consensus 275 ~C~~C~~~N~~p~~y~~-------i~d~~~~~El~~~~~tvEy~~p~~~~~---p~~p~~~~pv~l~~~~~fviD~s~~~ 344 (950)
+||+|+.+|+||++|+. ..|.++||||. .++|||++|+++.. |+.| |+|+ ||||+|.++
T Consensus 118 ~Cn~C~~~N~~P~~Y~~~l~~~g~r~d~~~rpEL~--~~~vef~a~~eY~~~~~~p~p----p~y~-----FvIDvs~~a 186 (766)
T 3eh2_A 118 QCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELS--LGSYEFLATVDYCKNNKFPSP----PAFI-----FMIDVSYNA 186 (766)
T ss_dssp ECTTTCCEEECCTTTTGGGGGSSSCCCCSCCHHHH--CSEEEEECCGGGSGGGSCCCC----CEEE-----EEEECSHHH
T ss_pred EeccccccCCCCHHHhccccccccccccccCcccc--cCceeeecCHhhccCCCCCCC----CEEE-----EEEECchhh
Confidence 99999999999999963 24678999996 59999999998642 3233 9999 999999977
Q ss_pred hhh----------hcCCCCCCCC-------CeeeeEeeccccceEEeecccccC-cccceeeeccccCCCCchhhhhhhh
Q psy13068 345 LIN----------QVGSPNLPPL-------QYEPLLCMRNQCRAILNPLCQVDY-KSKLWVCNFCFQRNAFPPQYAAITE 406 (950)
Q Consensus 345 lk~----------~~~l~~Lp~~-------~~vglit~~~~~s~v~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~ 406 (950)
+++ +.+|+.||++ ++||||||| +.||||++..+. +++++|+
T Consensus 187 v~sg~l~~~~~si~~~L~~lp~~~~~~~~~~~VG~ITfd---~~vh~y~l~~~~~~~q~~vv------------------ 245 (766)
T 3eh2_A 187 IRTGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYN---KVLHFYNVKSSLAQPQMMVV------------------ 245 (766)
T ss_dssp HHTTHHHHHHHHHHHHGGGCCCCSSCSSCCCEEEEEEES---SSEEEEECCTTCSSCEEEEE------------------
T ss_pred ccchHHHHHHHHHHHHHHhCCcccccCCccceEEEEEeC---CEEEEEECCCCCCCceEEEe------------------
Confidence 653 5788999975 899999999 999999997542 3333331
Q ss_pred ccCCcCCCCCcceEEEeeeccceeeeecccccceecccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCchh
Q psy13068 407 QHQPAELHPQFTTIEYTIPLLYSITYITENDNVIRRNEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQED 486 (950)
Q Consensus 407 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~ 486 (950)
T Consensus 246 -------------------------------------------------------------------------------- 245 (766)
T 3eh2_A 246 -------------------------------------------------------------------------------- 245 (766)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHhhhhcccccccCCchhhhHHHhhhhHHHHHhhcCCCCCCCCCCCCCccccccccccccccccccccccCCCCcchH
Q psy13068 487 EEMEEQRIEDEEDQEDGNEEIEDERETKMEEECQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETS 566 (950)
Q Consensus 487 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~ 566 (950)
.|.+| + ..+++ ++||+|++||++.
T Consensus 246 -----------~dl~d---------------------------~-f~P~~---------------~~~lv~l~e~~~~-- 269 (766)
T 3eh2_A 246 -----------SDVAD---------------------------M-FVPLL---------------DGFLVNVNESRAV-- 269 (766)
T ss_dssp -----------CCTTT---------------------------C-CCCCC---------------TTSSBCTTTTHHH--
T ss_pred -----------cChhh---------------------------h-ccccc---------------cceeEeHHHHHHH--
Confidence 11111 0 01222 5789999999877
Q ss_pred HHHHHHhhCCCCCccceeeeccCCCCCccccccccchHHHHHHHHhhcccccccccCCCCceEeccc-c-ccCCceeecc
Q psy13068 567 YYRTLLIHLPHYSRFQFLQVFNNSPDETSYYRHVLMREDLSQSLIMIQPVLYSYGFNGPPVPVLLDT-S-SIKPDCILLM 644 (950)
Q Consensus 567 ~i~~lL~~L~~~~~~~~lqvf~~s~~~~~~~r~~G~~~Al~~A~~ll~p~~~~~~f~gGp~~v~l~s-~-s~GPG~i~~~ 644 (950)
|+++|++||+ +|.+.+ ....|+| +||++|+.+|+... .||++.++.++ + +.|||+|+.+
T Consensus 270 -i~~lL~~L~~--------~~~~~~---~~~t~~g--~al~aa~~~l~~~~-----~GGkI~~F~s~lP~t~GpG~l~~r 330 (766)
T 3eh2_A 270 -ITSLLDQIPE--------MFADTR---ETETVFV--PVIQAGMEALKAAE-----CAGKLFLFHTSLPIAEAPGKLKNR 330 (766)
T ss_dssp -HHHHHHHHHH--------HHTTCC---CCCCCSH--HHHHHHHHHHHHTT-----CCEEEEEEECSCCCSSSTTCCCCC
T ss_pred -HHHHHHhhhh--------hccCCC---CCcchHH--HHHHHHHHHhccCC-----CCcEEEEEecCCCCcCCCcccccc
Confidence 9999999997 565333 3345666 99999999998421 24555333333 2 5899999966
Q ss_pred cchhhhhhccCCCccccccccccccchhhhhhHHHHHHHHHHHhhcccEEEEEeccCCCCCchhhhhhhhccCCCcEEEE
Q psy13068 645 DTFFQLLIFHGEEPIRSHNDIHKGNNKYQKMATKHYEGLALRAAIVGHAIDIYSCALDQTGLLEMKLCCNATGKPSHVLI 724 (950)
Q Consensus 645 d~~~~~~~~~~~~~irs~~d~~k~~~~~~~pa~~FYk~LA~~~~~~gIsVDLF~~s~~~vdlatl~~L~~~TGG~~~v~~ 724 (950)
++ ++++|+ +|+ +++++++++||++||++|+++||+||+|+++.+|+|++||+.|++.||| .+++
T Consensus 331 ~~---------~~~~~s----dke-~~~~~~a~~fY~~la~~~~~~~i~VDlF~~s~~~vdlatl~~l~~~TGG--~v~~ 394 (766)
T 3eh2_A 331 DD---------RKLINT----DKE-KTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGG--SVYK 394 (766)
T ss_dssp CC---------GGGTTS----TTG-GGGTSCSSTHHHHHHHHHHHHTEEEEEEECCSSCCCHHHHTHHHHHTTC--CEEE
T ss_pred cc---------cccCCC----cch-hhhccchHHHHHHHHHHHHhCCeEEEEEEecCCCcChHHHHHHHhhcCc--eEEE
Confidence 54 344443 344 4899999999999999999999999999999999999999999999999 9999
Q ss_pred cCCCCC----------------------------CCCCeeEeeecCC-----C------------c----CCCCCCCCCC
Q psy13068 725 AIEFAQ----------------------------PSPMLKAQKRLGS-----T------------T----AAHGAPIPQG 755 (950)
Q Consensus 725 y~~F~~----------------------------~S~GlkV~~~~Gs-----T------------t----~~~de~L~~~ 755 (950)
|++|+. ||+||+|+++||+ | + +++++++.++
T Consensus 395 y~~F~~~~d~~~f~~dl~~~l~~~~gf~a~mrVR~S~glkv~~~~G~~~~~~t~~~~l~~i~~d~s~~v~f~~~~~l~~~ 474 (766)
T 3eh2_A 395 YASFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEE 474 (766)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHSCEEEEEEEEEEECTTEEEEEEEESCBCSSSSCEEEEEEETTCCEEEEEEESSCCCTT
T ss_pred eCCCcchhHHHHHHHHHHHHhhhcceeeEEEEEEecCCeEEEEeECCeecCCCCceeeccCCCCceEEEEEEecCCCCCC
Confidence 999975 9999999999994 2 1 7888999878
Q ss_pred CceEEEEEEeeecCCCcEEEEEEeeeecccccCCCHHHHHhccCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHH
Q psy13068 756 GRGCIQFITHYQAPSGEKKVRVTTIARNWADATTQLDHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRWADRTLIRLC 835 (950)
Q Consensus 756 ~~~yIQ~AlLYT~~~GeRRIRV~Tl~l~~~pvts~l~~v~~s~D~eAi~~llaR~av~~~~~~~l~d~r~~L~~~lv~il 835 (950)
..+|||+|++||+++|+|||||||+++ |+++++.++|+++|+||++++|+|+|+.+++++++.++|+.|++.|++++
T Consensus 475 ~~~~~Q~allYt~~~G~RRiRV~T~~l---~vt~~~~~v~~~~Dqea~~~llar~av~~~~~~~~~~~R~~l~~~~~~~l 551 (766)
T 3eh2_A 475 SGALLQCALLYTSCAGQRRLRIHNLAL---NCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQIL 551 (766)
T ss_dssp TCEEEEEEEEEECTTSCEEEEEEEEEE---EEESSHHHHHHTBCHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEEEeEcCCCCEEEEEEEEee---EecCCHHHHHHhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999 88899999999999999999999999999999999999999999999999
Q ss_pred HHHhcccC--CCCCccccCcccccHHHHHHHHHhcccccC-CCCChhHHHHHHHHHcCCCHHhHHhccccceEEec-c--
Q psy13068 836 QKFGHYNK--DDPHSFQLPENFQMYPQFMYHLRRSQFLQV-FNNSPDETSYYRHVLMREDLSQSLIMIQPVLYSYG-F-- 909 (950)
Q Consensus 836 ~~Yr~~~~--~~~~qliLPesLklLP~yi~~LlKS~~Lr~-~n~spDeR~~~~~~l~s~~v~~~l~~iYP~L~slh-~-- 909 (950)
..||++|+ ++++||+||++||+||+||++|+||++|+. +++++|||+|++++++++++.+++.||||+||++| +
T Consensus 552 ~~Yrk~~~~~~s~~ql~lp~~lkllP~~~~~L~Ks~~l~~~~~~s~Der~~~~~~l~~~~~~~~l~~iyP~L~~~h~~~~ 631 (766)
T 3eh2_A 552 ACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPV 631 (766)
T ss_dssp HHHHHHC------CCCCCCGGGTTHHHHHHHHHTSTTTSCCTTCCHHHHHHHHHHHHHCCHHHHHHHHSCEEEECSSCCC
T ss_pred HHHHhhccCCCCccceecCHHHHHHHHHHHHHHccHhhcCCCCCCccHHHHHHHHHHCCCHHHHHHHHhheEEEeecCCc
Confidence 99999984 366899999999999999999999999995 79999999999999999999999999999999999 3
Q ss_pred C--CCCcccccccccccCCeEEEEECCCEEEEEEcCCCCCC
Q psy13068 910 N--GPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSNAR 948 (950)
Q Consensus 910 ~--g~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~~w 948 (950)
+ +.|++++||.++|.+|||||||+|++++||+|++|++|
T Consensus 632 ~~~~~P~~v~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~ 672 (766)
T 3eh2_A 632 ESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQG 672 (766)
T ss_dssp SCC--CCCBCSSGGGCCTTCEEEEECSSEEEEEECTTCCHH
T ss_pred ccccCCCCcCCcHHHcCCCcEEEEEcCcEEEEEecCCCCHH
Confidence 3 25899999999999999999999999999999999976
No 6
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=100.00 E-value=3.1e-98 Score=920.66 Aligned_cols=544 Identities=18% Similarity=0.261 Sum_probs=460.1
Q ss_pred hhccCCCeeeeeccccCCCHHHHhhcccceEEEeccCCCCC----CCCCCCC-cccccccccccceeeccceEeCCCCee
Q psy13068 200 YQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKP----DLPPLQY-EPLLCMRNQCRAILNPLCQVDYKSKLW 274 (950)
Q Consensus 200 ~~~e~~~~iR~t~~~~P~t~~~a~k~~~Plg~~~~Pl~~~~----~~p~~~~-~p~rC~~~~C~aylNP~~~~d~~g~~w 274 (950)
+.+++++|||+|||.||.++.+++++++|+||+|+||++.. .+|++.. +|+||++ |+|||||||+|+.+|++|
T Consensus 174 ~gn~~p~~vR~T~n~iP~t~~l~~~~~lPlg~vv~P~a~~~~~~~~vpvv~~~~pvRC~r--CrAYiNPf~~~~~~g~~W 251 (926)
T 1m2v_B 174 LSNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRR--CRSYMNPFVTFIEQGRRW 251 (926)
T ss_dssp SSSCCTTTEEESBSSEESBHHHHHHHTCCCEEEECSCCSSSTTSSCCCEECSCCCCBCSS--SCCBCCTTCEEETTTTEE
T ss_pred CCCCCCCceecccccCCCCHHHHHhCCCCeEEEEecCCCcccCCCCCCccCCCCCCccCC--ccCEecCceEEeCCCCEE
Confidence 34668999999999999999999999999999999999752 3565555 4999999 999999999999999999
Q ss_pred EecCCCCCCCCchhhhh-----ccccCCCCcccCCCceEEEEccCCCCC-CCCCCCCcceeecccceEEEEcchhhhhh-
Q psy13068 275 VCNFCFQRNAFPPQYAA-----ITEQHQPAELHPQFTTIEYTIPVSQCF-PKYPLRSLPVFLPFLIQFVFFLAITHLIN- 347 (950)
Q Consensus 275 ~C~~C~~~N~~p~~y~~-----i~d~~~~~El~~~~~tvEy~~p~~~~~-p~~p~~~~pv~l~~~~~fviD~s~~~lk~- 347 (950)
+||||+.+|++|++|+. ..|..+||||. ++||||++|+++.. ++.| |+|+ ||||+|..++++
T Consensus 252 ~CnfC~~~N~~P~~Y~~~~~~~~~d~~~RpEL~--~~tvEyi~p~ey~~r~p~p----pvyv-----FvIDvS~~av~~g 320 (926)
T 1m2v_B 252 RCNFCRLANDVPMQMDQSDPNDPKSRYDRNEIK--CAVMEYMAPKEYTLRQPPP----ATYC-----FLIDVSQSSIKSG 320 (926)
T ss_dssp ECTTTCCEEECCGGGTTTSTTCGGGGGGSHHHH--CSEEEEECCGGGCSSCCCC----CBEE-----EEEECSHHHHHSC
T ss_pred EccCCCCCCCCchhhccccccCccccccCcccc--CceEEEEcChhhccCCCCC----cEEE-----EEEECCHHHHhhh
Confidence 99999999999999971 13456679994 89999999987621 2122 9999 999999966543
Q ss_pred ---------hcCCCCCCC---CCeeeeEeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhhhccCCcCCCC
Q psy13068 348 ---------QVGSPNLPP---LQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHP 415 (950)
Q Consensus 348 ---------~~~l~~Lp~---~~~vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (950)
+.+|+.||+ +++||||||| +.||||++..+..
T Consensus 321 ~l~~l~~sI~~~L~~LP~~~~~~~VGlITFd---s~Vh~y~l~~~~~--------------------------------- 364 (926)
T 1m2v_B 321 LLATTINTLLQNLDSIPNHDERTRISILCVD---NAIHYFKIPLDSE--------------------------------- 364 (926)
T ss_dssp HHHHHHHHHHHTTTTSCCTTSCCEECEEEES---SSEEEEECCCC-----------------------------------
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC---CEEEEEecCCccc---------------------------------
Confidence 678999997 6999999999 8999999974320
Q ss_pred CcceEEEeeeccceeeeecccccceecccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhc
Q psy13068 416 QFTTIEYTIPLLYSITYITENDNVIRRNEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIE 495 (950)
Q Consensus 416 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~ 495 (950)
|.|+ +.+ .|+ |.
T Consensus 365 ----------------------------------------------g~k~-~~~------------q~q---------ml 376 (926)
T 1m2v_B 365 ----------------------------------------------NNEE-SAD------------QIN---------MM 376 (926)
T ss_dssp ------------------------------------------------------------------CCE---------EE
T ss_pred ----------------------------------------------CCcc-ccc------------chh---------hc
Confidence 1111 100 111 12
Q ss_pred ccccccCCchhhhHHHhhhhHHHHHhhcCCCCCCCCCCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhC
Q psy13068 496 DEEDQEDGNEEIEDERETKMEEECQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHL 575 (950)
Q Consensus 496 ~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L 575 (950)
+..|.+| + ..++| +.||++++||++. |+++|++|
T Consensus 377 vvsdl~d---------------------------~-f~P~~---------------~~~Lv~l~e~~~~---I~~lLe~L 410 (926)
T 1m2v_B 377 DIADLEE---------------------------P-FLPRP---------------NSMVVSLKACRQN---IETLLTKI 410 (926)
T ss_dssp EECCCSS---------------------------C-CCSCS---------------SSSSEETTTTHHH---HHHHHHHH
T ss_pred ccccccc---------------------------c-cCCCc---------------ccccccHHHHHHH---HHHHHHhh
Confidence 2223222 1 01222 5799999999877 99999999
Q ss_pred CCCCccceeeeccCCCCCccccccccchHHHHHHHHhhcccccc-cccCCCCceEeccccccCCceeecccchhhhhhcc
Q psy13068 576 PHYSRFQFLQVFNNSPDETSYYRHVLMREDLSQSLIMIQPVLYS-YGFNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFH 654 (950)
Q Consensus 576 ~~~~~~~~lqvf~~s~~~~~~~r~~G~~~Al~~A~~ll~p~~~~-~~f~gGp~~v~l~s~s~GPG~i~~~d~~~~~~~~~ 654 (950)
+. +| ++++++.||+| +||++|+.+|+..+++ ++|++|++ |+|||+|+.+++
T Consensus 411 ~~--------~~---~~~~~~~~~~G--~AL~aA~~lL~~~GGrI~~F~sg~P-------t~GpG~l~~re~-------- 462 (926)
T 1m2v_B 411 PQ--------IF---QSNLITNFALG--PALKSAYHLIGGVGGKIIVVSGTLP-------NLGIGKLQRRNE-------- 462 (926)
T ss_dssp HH--------HT---SSCCCCCCCHH--HHHHHHHHHHTTTCEEEEEEESSCC-------CSSTTCCCCCCC--------
T ss_pred hh--------hh---cCCCCCCccHH--HHHHHHHHHHHhhCCEEEEEecCCC-------CCCCCccccccc--------
Confidence 98 44 45678999999 9999999999964444 46666666 999999996554
Q ss_pred CCCccccccccccccchhhhhhHHHHHHHHHHHhhcccEEEEEeccCCCCCchhhhhhhhccCCCcEEEEcCCCCC----
Q psy13068 655 GEEPIRSHNDIHKGNNKYQKMATKHYEGLALRAAIVGHAIDIYSCALDQTGLLEMKLCCNATGKPSHVLIAIEFAQ---- 730 (950)
Q Consensus 655 ~~~~irs~~d~~k~~~~~~~pa~~FYk~LA~~~~~~gIsVDLF~~s~~~vdlatl~~L~~~TGG~~~v~~y~~F~~---- 730 (950)
++|.+++|+++++++++++||++||++|+++||+||||+++.+|+|++||+.|++.||| .+++|++|+.
T Consensus 463 -----~~~~~~~ke~~~ll~~a~~FYk~LA~~~~~~gisVDlF~~s~~~vdla~l~~l~~~TGG--~v~~y~~F~~~~~~ 535 (926)
T 1m2v_B 463 -----SGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRFTAG--QTHFYPGFSGKNPN 535 (926)
T ss_dssp ---------CCTTHHHHHTSCSSTHHHHHHHHHHHHTEEEEEEEEESSCCCHHHHHHHHHTTTC--CEEEEESCCTTSHH
T ss_pred -----ccccCcccchhhhccchHHHHHHHHHHHHHcCeEEEEEEccCCCcChHHHHHHHhcCCc--eEEEcCCCcchhhh
Confidence 35778888777799999999999999999999999999999999999999999999999 9999999975
Q ss_pred --------------------------CCCCeeEeeecCC-----C------------c----CCCCCCCCCCCceEEEEE
Q psy13068 731 --------------------------PSPMLKAQKRLGS-----T------------T----AAHGAPIPQGGRGCIQFI 763 (950)
Q Consensus 731 --------------------------~S~GlkV~~~~Gs-----T------------t----~~~de~L~~~~~~yIQ~A 763 (950)
||+||+|+++||+ + + |++++++. ...+|||+|
T Consensus 536 d~~kf~~dl~~~Lt~~~gf~a~mrVR~S~glkv~~~~G~~~~~~s~~~~l~~l~~d~s~av~f~~~~~l~-~~~~~~Q~a 614 (926)
T 1m2v_B 536 DIVKFSTEFAKHISMDFCMETVMRARGSTGLRMSRFYGHFFNRSSDLCAFSTMPRDQSYLFEVNVDESIM-ADYCYVQVA 614 (926)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEEEEEEECTTEEEEEEESSSBCSSTTEEEEEEECSSCCEEEEEEECSBCC-SSEEEEEEE
T ss_pred HHHHHHHHHHHHhhhhhceeEEEEEEeCCCcEEEEeecCccccCcCceEeeccCCCCEEEEEEEeccCCC-CCcEEEEEE
Confidence 9999999999994 1 1 67788875 578999999
Q ss_pred EeeecCCCcEEEEEEeeeecccccCCCHHHHHhccCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHhcccC
Q psy13068 764 THYQAPSGEKKVRVTTIARNWADATTQLDHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRWADRTLIRLCQKFGHYNK 843 (950)
Q Consensus 764 lLYT~~~GeRRIRV~Tl~l~~~pvts~l~~v~~s~D~eAi~~llaR~av~~~~~~~l~d~r~~L~~~lv~il~~Yr~~~~ 843 (950)
++||+.+|+|||||||+++ |+++++.++|+++|+||++++|+|+|+.+++++++.|+|+||+++|+++++.||+.++
T Consensus 615 llYT~~~G~RRiRV~T~~l---~vt~~l~~v~~s~Dqea~~~llar~av~~~~~~~~~d~r~~L~~~li~il~~Yrk~~~ 691 (926)
T 1m2v_B 615 VLLSLNNSQRRIRIITLAM---PTTESLAEVYASADQLAIASFYNSKAVEKALNSSLDDARVLINKSVQDILATYKKEIV 691 (926)
T ss_dssp EEEEETTTEEEEEEEEEEE---EEESCHHHHHHTBCHHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEcCCCCEEEEEEeecc---cccCCHHHHHHhcCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999 7888999999999999999999999999999999999999999999999999999985
Q ss_pred C--CC--CccccCcccccHHHHHHHHHhcccccCCCCCh-hHHHHHHHHHcCCCHHhHHhccccceEEec-cC---C-C-
Q psy13068 844 D--DP--HSFQLPENFQMYPQFMYHLRRSQFLQVFNNSP-DETSYYRHVLMREDLSQSLIMIQPVLYSYG-FN---G-P- 912 (950)
Q Consensus 844 ~--~~--~qliLPesLklLP~yi~~LlKS~~Lr~~n~sp-DeR~~~~~~l~s~~v~~~l~~iYP~L~slh-~~---g-~- 912 (950)
+ .+ ++|+||++||+||+|||+|+||++|+ ++.+| |||+|++++++++++..++.||||+||+|| +. | +
T Consensus 692 ~~~~~~~~sl~Lp~~lkllP~~~~~L~KS~~l~-~~~~p~Dera~~~~~l~~~~~~~l~~~iyP~L~s~h~~~~~~g~~~ 770 (926)
T 1m2v_B 692 VSNTAGGAPLRLCANLRMFPLLMHSLTKHMAFR-SGIVPSDHRASALNNLESLPLKYLIKNIYPDVYSLHDMADEAGLPV 770 (926)
T ss_dssp CCTTSSSSCCEEEGGGTTHHHHHHHHHTSTTTC-SSCCCHHHHHHHHHHHHHSCHHHHHHHHSCEEEETTTCCSSCSCC-
T ss_pred cccCCCCcccccCHHHHHHHHHHHHHhcchhhC-CCCCCccHHHHHHHHHHcCCHHHHHHhccCeEEEeccCcccccccc
Confidence 4 23 36999999999999999999999999 55665 999999999999999999999999999999 31 2 1
Q ss_pred -------------CcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 913 -------------PVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 913 -------------P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
|++++||.++|+++|+||||+|..|++|+|++++
T Consensus 771 ~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lWvG~~~~ 817 (926)
T 1m2v_B 771 QTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAV 817 (926)
T ss_dssp --------CCCCCCCCBCSCSTTCCTTCEEEEECSSEEEEEECTTCC
T ss_pred cccccccccccccCCcccCcHHHhccCCEEEEECCCEEEEEecCCCC
Confidence 7899999999999999999999999999999987
No 7
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=100.00 E-value=4e-98 Score=914.30 Aligned_cols=544 Identities=18% Similarity=0.254 Sum_probs=446.2
Q ss_pred hhccCCCeeeeeccccCCCHHHHhhcccceEEEeccCCCCC----CCCCCCC-cccccccccccceeeccceEeCCCCee
Q psy13068 200 YQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKP----DLPPLQY-EPLLCMRNQCRAILNPLCQVDYKSKLW 274 (950)
Q Consensus 200 ~~~e~~~~iR~t~~~~P~t~~~a~k~~~Plg~~~~Pl~~~~----~~p~~~~-~p~rC~~~~C~aylNP~~~~d~~g~~w 274 (950)
+.+++++|||+|||.||.++.+++++++|+|++|+||++.. .+|.+.. +|+||++ |+|||||||+++.+|++|
T Consensus 58 ~~n~~p~~vR~T~n~iP~t~~~~~~~~lPlg~vv~P~~~~~~~~~~~pvv~~~~pvRC~~--CrayiNPf~~~~~~g~~W 135 (810)
T 1pcx_A 58 LSNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRR--CRSYMNPFVTFIEQGRRW 135 (810)
T ss_dssp GGSCCTTTEEESBSSEESSHHHHHHHTCCCEEEECSCCSSSTTSSCCCEECSCCCCBCTT--TCCBCCTTCEEETTTTEE
T ss_pred CCCCCCCceeeecccCCCCHHHHHhCCCCeEEEEecCCccccCCCCCCccCCCCCCccCC--ccCEecCceEEeCCCCEE
Confidence 45778999999999999999999999999999999999752 3565555 4999999 999999999999999999
Q ss_pred EecCCCCCCCCchhhhh-----ccccCCCCcccCCCceEEEEccCCCCC-CCCCCCCcceeecccceEEEEcchhhhhh-
Q psy13068 275 VCNFCFQRNAFPPQYAA-----ITEQHQPAELHPQFTTIEYTIPVSQCF-PKYPLRSLPVFLPFLIQFVFFLAITHLIN- 347 (950)
Q Consensus 275 ~C~~C~~~N~~p~~y~~-----i~d~~~~~El~~~~~tvEy~~p~~~~~-p~~p~~~~pv~l~~~~~fviD~s~~~lk~- 347 (950)
+||||+.+|++|++|+. ..|..+||||. ++||||++|+++.. |+.| |+|+ ||||+|..++++
T Consensus 136 ~C~~C~~~N~~P~~y~~~~~~~~~d~~~RpEL~--~~tvEy~~p~~y~~~~p~p----p~yv-----FvIDvs~~av~~g 204 (810)
T 1pcx_A 136 RCNFCRLANDVPMQMDQSDPNDPKSRYDRNEIK--CAVMEYMAPKEYTLRQPPP----ATYC-----FLIDVSQSSIKSG 204 (810)
T ss_dssp ECTTTCCEEECCGGGGC-----CCCGGGSHHHH--CSEEEEECCGGGCSSCCCC----CEEE-----EEEECSHHHHHHT
T ss_pred EccCCCCcCCCchhhccccccCccccccCcccc--CceEEEEcCchhccCCCCC----cEEE-----EEEECChHHHhhh
Confidence 99999999999999971 12455679994 89999999987621 2122 9999 999999966542
Q ss_pred ---------hcCCCCCCC---CCeeeeEeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhhhccCCcCCCC
Q psy13068 348 ---------QVGSPNLPP---LQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHP 415 (950)
Q Consensus 348 ---------~~~l~~Lp~---~~~vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (950)
+.+|+.||+ +++||||||| +.||+|++..+..
T Consensus 205 ~l~~~~~si~~~L~~Lp~~~~~~~VGlITfd---~~V~~~~l~~~~~--------------------------------- 248 (810)
T 1pcx_A 205 LLATTINTLLQNLDSIPNHDERTRISILCVD---NAIHYFKIPLDSE--------------------------------- 248 (810)
T ss_dssp HHHHHHHHHHHHTTTSCCTTSCCEEEEEEES---SSEEEEECCCGGG---------------------------------
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC---CEEEEEecCcccc---------------------------------
Confidence 568999997 6999999999 8999999874210
Q ss_pred CcceEEEeeeccceeeeecccccceecccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhc
Q psy13068 416 QFTTIEYTIPLLYSITYITENDNVIRRNEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIE 495 (950)
Q Consensus 416 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~ 495 (950)
|.|+++ .+|| |.
T Consensus 249 ----------------------------------------------g~k~~~-------------~q~~---------ml 260 (810)
T 1pcx_A 249 ----------------------------------------------NNEESA-------------DQIN---------MM 260 (810)
T ss_dssp ----------------------------------------------C--------------------CE---------EE
T ss_pred ----------------------------------------------Cccccc-------------cchh---------hc
Confidence 111100 0011 12
Q ss_pred ccccccCCchhhhHHHhhhhHHHHHhhcCCCCCCCCCCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhC
Q psy13068 496 DEEDQEDGNEEIEDERETKMEEECQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHL 575 (950)
Q Consensus 496 ~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L 575 (950)
+..|.+| | ..++| ++||+|++||++. |+++|++|
T Consensus 261 vv~dl~d---------------------------~-f~P~~---------------~~~Lv~l~e~~~~---i~~lL~~L 294 (810)
T 1pcx_A 261 DIADLEE---------------------------P-FLPRP---------------NSMVVSLKACRQN---IETLLTKI 294 (810)
T ss_dssp CCCCTTC---------------------------C---------------------TTTSEETTTTHHH---HHHHHHHH
T ss_pred ccccccc---------------------------c-cCCCc---------------ccccccHHHHHHH---HHHHHHhh
Confidence 2222222 1 01122 5789999999877 99999999
Q ss_pred CCCCccceeeeccCCCCCccccccccchHHHHHHHHhhcccccc-cccCCCCceEeccccccCCceeecccchhhhhhcc
Q psy13068 576 PHYSRFQFLQVFNNSPDETSYYRHVLMREDLSQSLIMIQPVLYS-YGFNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFH 654 (950)
Q Consensus 576 ~~~~~~~~lqvf~~s~~~~~~~r~~G~~~Al~~A~~ll~p~~~~-~~f~gGp~~v~l~s~s~GPG~i~~~d~~~~~~~~~ 654 (950)
+. +| ++++++.||+| +||++|..+|+..+++ ++|++|++ |+|||+|+.+++
T Consensus 295 ~~--------~~---~~~~~~~~a~G--~AL~~A~~lL~~~GGrI~~F~sg~p-------t~GpG~l~~r~~-------- 346 (810)
T 1pcx_A 295 PQ--------IF---QSNLITNFALG--PALKSAYHLIGGVGGKIIVVSGTLP-------NLGIGKLQRRNE-------- 346 (810)
T ss_dssp HH--------HT---TTCCCCCCCHH--HHHHHHHHHHTTTCEEEEEEESSCC-------CSSTTCCCC-----------
T ss_pred hh--------hc---cCCCCCCccHH--HHHHHHHHHHHhcCCEEEEEecCCC-------CCCCCccccccc--------
Confidence 97 44 45678999999 9999999999965444 56666666 999999996554
Q ss_pred CCCccccccccccccchhhhhhHHHHHHHHHHHhhcccEEEEEeccCCCCCchhhhhhhhccCCCcEEEEcCCCCC----
Q psy13068 655 GEEPIRSHNDIHKGNNKYQKMATKHYEGLALRAAIVGHAIDIYSCALDQTGLLEMKLCCNATGKPSHVLIAIEFAQ---- 730 (950)
Q Consensus 655 ~~~~irs~~d~~k~~~~~~~pa~~FYk~LA~~~~~~gIsVDLF~~s~~~vdlatl~~L~~~TGG~~~v~~y~~F~~---- 730 (950)
++|.+++|+++++++++.+||++||.+|+++||+||+|+++.+|+|++||+.|++.||| .+++|++|+.
T Consensus 347 -----~~~~~~~ke~~~l~~~a~~fY~~la~~~~~~gi~VDlF~~s~~~~dla~l~~l~~~TGG--~v~~y~~F~~~~~~ 419 (810)
T 1pcx_A 347 -----SGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRFTAG--QTHFYPGFSGKNPN 419 (810)
T ss_dssp ----------------------CCHHHHHHHHHHHTTEEEEEEEEESSCCCHHHHHHHHHTTTC--CEEEEETCCTTSHH
T ss_pred -----ccccCcccchhhhcccchHHHHHHHHHHHHCCeEEEEEEccCCccChHHHHHHHhcCCc--EEEEcCCCcchhhH
Confidence 35778888877799999999999999999999999999999999999999999999999 9999999974
Q ss_pred --------------------------CCCCeeEeeecCC-----C------------c----CCCCCCCCCCCceEEEEE
Q psy13068 731 --------------------------PSPMLKAQKRLGS-----T------------T----AAHGAPIPQGGRGCIQFI 763 (950)
Q Consensus 731 --------------------------~S~GlkV~~~~Gs-----T------------t----~~~de~L~~~~~~yIQ~A 763 (950)
||+||+|+++||+ + + +++++++. ...+|||+|
T Consensus 420 d~~~f~~dl~~~l~~~~gf~a~mrVR~S~gl~v~~~~G~~~~~~~~~~~l~~~~~d~s~~v~f~~~~~l~-~~~~~~Q~a 498 (810)
T 1pcx_A 420 DIVKFSTEFAKHISMDFCMETVMRARGSTGLRMSRFYGHFFNRSSDLCAFSTMPRDQSYLFEVNVDESIM-ADYCYVQVA 498 (810)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEEEEEEECTTEEEEEEESSSBCSSSSEEEESSCCSSCCEEEEEEECSCCC-SSEEEEEEE
T ss_pred HHHHHHHHHHHHhhhhcceeEEEEEEcCCCeEEEEeecCccccCcCceEeecCCCCCEEEEEEEeccCCC-CCcEEEEEE
Confidence 9999999999994 1 1 67788875 578999999
Q ss_pred EeeecCCCcEEEEEEeeeecccccCCCHHHHHhccCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHhcccC
Q psy13068 764 THYQAPSGEKKVRVTTIARNWADATTQLDHISSGFDQEAAAVIMGRMVVNRAEQDDGPDVMRWADRTLIRLCQKFGHYNK 843 (950)
Q Consensus 764 lLYT~~~GeRRIRV~Tl~l~~~pvts~l~~v~~s~D~eAi~~llaR~av~~~~~~~l~d~r~~L~~~lv~il~~Yr~~~~ 843 (950)
++||+.+|+|||||||+++ |+++++.++|+++|+||++++|||+|+.+++++++.|+|+||+++|+++++.||+.++
T Consensus 499 llYt~~~G~RRiRV~T~~~---~vt~~~~~v~~~~Dqea~~~llar~av~~~~~~~~~d~r~~l~~~li~il~~Yrk~~~ 575 (810)
T 1pcx_A 499 VLLSLNNSQRRIRIITLAM---PTTESLAEVYASADQLAIASFYNSKAVEKALNSSLDDARVLINKSVQDILATYKKEIV 575 (810)
T ss_dssp EEEECTTSCEEEEEEEEEE---EEESCHHHHHHTBCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEcCCCCEEEEEEecCc---cccCCHHHHHHhcCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999 7888999999999999999999999999999999999999999999999999999985
Q ss_pred C--CC--CccccCcccccHHHHHHHHHhcccccCCCCCh-hHHHHHHHHHcCCCHHhHHhccccceEEec-cC---C---
Q psy13068 844 D--DP--HSFQLPENFQMYPQFMYHLRRSQFLQVFNNSP-DETSYYRHVLMREDLSQSLIMIQPVLYSYG-FN---G--- 911 (950)
Q Consensus 844 ~--~~--~qliLPesLklLP~yi~~LlKS~~Lr~~n~sp-DeR~~~~~~l~s~~v~~~l~~iYP~L~slh-~~---g--- 911 (950)
+ .+ ++|+||++||+||+|||+|+||++|+ ++.+| |||+|++++++++++..++.||||+||++| +. |
T Consensus 576 ~~~~~~~~~l~lp~~lkllP~~~~~L~ks~~l~-~~~~p~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~g~~~ 654 (810)
T 1pcx_A 576 VSNTAGGAPLRLCANLRMFPLLMHSLTKHMAFR-SGIVPSDHRASALNNLESLPLKYLIKNIYPDVYSLHDMADEAGLPV 654 (810)
T ss_dssp ----CCSSCCEEEGGGTTHHHHHHHHHTSTTTC-SSCCCHHHHHHHHHHHHHSCHHHHHHHHSCEEEECTTCCSSTTSBC
T ss_pred cccCCCCcccccCHHHHHHHHHHHHHhcchhcC-CCCCCccHHHHHHHHHHcCCHHHHHHhccCEEEEeccCcccccccc
Confidence 3 23 46999999999999999999999999 56666 999999999999999999999999999999 31 2
Q ss_pred ------------CCcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 912 ------------PPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 912 ------------~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
.|++++||.++|+++|+||||+|..|++|+|++++
T Consensus 655 ~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lwvg~~~~ 701 (810)
T 1pcx_A 655 QTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAV 701 (810)
T ss_dssp --------CCBCCCCBCCSSTTSCCTTCEEEEECSSEEEEEECTTCC
T ss_pred cccccccccccccCCcccCCHHHhCcCCEEEEECCCEEEEEeCCCCC
Confidence 17899999999999999999999999999999987
No 8
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=100.00 E-value=1.9e-50 Score=491.88 Aligned_cols=541 Identities=36% Similarity=0.576 Sum_probs=377.7
Q ss_pred CccHHHHHhccCCCCceEEeecccCCchhhhhhcccCceeeeecCCCCCCCCCCcccceeeccccccceecccccccccc
Q psy13068 1 MTTYEEFFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQGCVSS 80 (950)
Q Consensus 1 ~~~~~~~~~~~~~~~~~r~~wn~~p~s~~~~~~~~~p~g~~~~p~~~~~~~p~~~~~p~~c~~~~c~~~~np~~~~~~~~ 80 (950)
|..|+++.|+|++.+|||+|||+||+|+.+++++++|+||+||||++.+++|+++++|+||+|.+|||||||||+ ||
T Consensus 5 ~~~~~~~~~~n~~~~~vR~T~n~~P~t~~~~~~~~lPlg~vi~P~~~~~~~p~v~~~pvRC~~~~CrayiNPf~~---~~ 81 (769)
T 2nut_A 5 MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVLNPLCQ---VD 81 (769)
T ss_dssp --CHHHHHHHHHHHHSEEESBSSBCSSHHHHTTCSSCCEEEECTTCCCSCCCCBCSCCCBCSSTTCCCBCCTTSE---EE
T ss_pred ccchhhhhcccCCCCcccceeccCCCChHHHhcccCCeEEEEeeCCCCCCCCcCCCCCCcCCCCCCCeEECCceE---Ee
Confidence 566999999999999999999999999999999999999999999999999999999999997669999999999 99
Q ss_pred cccCceeccccccccCCCcccc------------cccccceeeeccccccCcccccCcccCCCCCccccccccccccccc
Q psy13068 81 TLEALWLKSIFFQAEDGIRDRS------------FGFHNSSVNIVRSVGHGVINHFGFRVGDESKTSRSFRDGILHDNNI 148 (950)
Q Consensus 81 ~~~~~w~c~~c~~~n~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (950)
.+++.|+||||+++|+...+-. ....+.||.+.+.. +.+|
T Consensus 82 ~~~~~W~C~~C~~~N~~P~~Y~~~~~~~~~pEL~p~~~tvEy~~~~~~----------------p~pp------------ 133 (769)
T 2nut_A 82 YRAKLWACNFCYQRNQFPPSYAGISELNQPAELLPQFSSIEYVVLRGP----------------QMPL------------ 133 (769)
T ss_dssp TTTTEEECSSSCCEEECCGGGTTCBTTBCCGGGSGGGSSEEEEECSSC----------------CCCC------------
T ss_pred CCCCEEEccCCCCCCCCChHHccCCcccCChhhcCCCCcEEEEccCCC----------------CCCC------------
Confidence 9999999999999999776510 01122222222211 1112
Q ss_pred cchhhhhhhhcCCCCCCccccCCcccccccceeeeeccccc----ccchhhHHHHhhcc-CCCeeeeeccccCCCHHHHh
Q psy13068 149 YNFTPLFKECLHPPNGRVLEWNGTRVAHSTLTVQLSLETLK----ISMTTYEEFFYQNE-ERDGIRCTWNVWPSSKLEAS 223 (950)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~st~~~~~~~~~~~----~~~~~~~~~~~~~e-~~~~iR~t~~~~P~t~~~a~ 223 (950)
.|.+|||.|+...++.+++.. ++.+|+.|| ||++||+.+++.++ ..+.+..++.+.++++..++
T Consensus 134 -~~vFvIDvS~~a~~l~~l~~s----------i~~~L~~Lp~~~~VGlITf~~~v~~y~l~~~~~~~~~vf~G~k~~~~~ 202 (769)
T 2nut_A 134 -IFLYVVDTCMEDEDLQALKES----------MQMSLSLLPPTALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAK 202 (769)
T ss_dssp -EEEEEEECCSCHHHHHHHHHH----------HHHHHTTSCTTCEEEEEEESSEEEEEESSCCSSCEEEEEETTSCCCSH
T ss_pred -EEEEEEECCccHHHHHHHHHH----------HHHHHHhCCCCceEEEEEeCCEEEEEeCCCCCCccceeecCCccccHH
Confidence 388999999988876666666 777777887 99999999999998 56667888888888776555
Q ss_pred hcccceEEEeccCCCCCCCCCCCCcccccccccccceeeccceEeCCCCeeEecCCCCCCCCchhhhhccccCCCCcccC
Q psy13068 224 RLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHP 303 (950)
Q Consensus 224 k~~~Plg~~~~Pl~~~~~~p~~~~~p~rC~~~~C~aylNP~~~~d~~g~~w~C~~C~~~N~~p~~y~~i~d~~~~~El~~ 303 (950)
+.+..+++-- |..+.. .|.. .++..+.. ..++-|...+. ..-..+-+...+ ..
T Consensus 203 q~~~ml~v~d-~~~~~~-~~~~-~~~f~~p~---~~~lv~~~e~~------------------~~i~~lLe~L~~-~~-- 255 (769)
T 2nut_A 203 QLQEMLGLSK-VPVTQA-TRGP-QVQQPPPS---NRFLQPVQKID------------------MNLTDLLGELQR-DP-- 255 (769)
T ss_dssp HHHHHHC----------------------CC---CSSSEEHHHHH------------------HHHHHHHHHCCC-CS--
T ss_pred HHHHHhCCCC-cccccc-cccc-cccCCCcc---cceeeeHHHHH------------------HHHHHHHHhccc-cc--
Confidence 5443333210 000000 0000 00000000 12333332221 000011111111 00
Q ss_pred CCceEEEEccCCCCCCCCCCCCcceee--------------cccceEEEEcchhhhhhhcCCCCCCCC------------
Q psy13068 304 QFTTIEYTIPVSQCFPKYPLRSLPVFL--------------PFLIQFVFFLAITHLINQVGSPNLPPL------------ 357 (950)
Q Consensus 304 ~~~tvEy~~p~~~~~p~~p~~~~pv~l--------------~~~~~fviD~s~~~lk~~~~l~~Lp~~------------ 357 (950)
|+.. ..+++.++++.++ ++||+.+.++.++.+++.....++++.
T Consensus 256 --------~~~~--~~~~~~~a~G~Al~~A~~lL~~~~~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~ke~~ 325 (769)
T 2nut_A 256 --------WPVP--QGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIDKDNA 325 (769)
T ss_dssp --------SCCC--TTBCCCCCHHHHHHHHHHHHHHHSCSSCCEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHTTCC
T ss_pred --------cccc--CCCCCccchHHHHHHHHHHHhhcccCCCcEEEEEeCCCCCCCCCCCcCcccccccccccccccchh
Confidence 1100 0122333333332 389999999988877774443333211
Q ss_pred ---------------------Ceeee-EeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhhhccCCcCCCC
Q psy13068 358 ---------------------QYEPL-LCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHP 415 (950)
Q Consensus 358 ---------------------~~vgl-it~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (950)
.-|-+ ++-.+++ .+..+......++|.+++.++|+.+.+.+.+++.+.......+.+
T Consensus 326 ~~~~~a~~fY~~la~~~~~~gi~VDlF~~~~~~v-dla~l~~l~~~TGG~~~~~~~F~~~~~~~~l~~~~~~~~~~~l~~ 404 (769)
T 2nut_A 326 KYVKKGTKHFEALANRAATTGHVIDIYACALDQT-GLLEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDMHGQFKM 404 (769)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTCEEEEEEECSSCC-CHHHHTHHHHHSSCCEEEESCSSSHHHHHHHHHTTCBCTTSCBSC
T ss_pred hhccchHHHHHHHHHHHHHCCeEEEEEeccCCcc-ChHHHHHHhhcCCceEEEcCCCchhhHHHHHHHHHhhhcccccce
Confidence 11111 1122222 333344445678889999999998888888888776655555678
Q ss_pred Ccc-eEEEeee-------ccceeeeecccccceecccccccc----cccCCccccccc----------------------
Q psy13068 416 QFT-TIEYTIP-------LLYSITYITENDNVIRRNEIHIKP----RICGLQEENIEE---------------------- 461 (950)
Q Consensus 416 ~~~-~~e~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~---------------------- 461 (950)
+++ ++++.++ .+|.+...+.++..++++|+|++. .++.+++..-+.
T Consensus 405 gf~a~mrVr~S~gl~v~~~~G~~~~~~~~~~~vsd~~~g~~~t~~~~l~~~~~d~s~~v~f~~~~~~~~~l~~~~~~~~Q 484 (769)
T 2nut_A 405 GFGGTLEIKTSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGAIQ 484 (769)
T ss_dssp EEEEEEEEEECTTEEEEEEESSCEECCCCCTTBCSSCCSBCSCSEEEEEEECTTCCEEEEEEEC----------CCEEEE
T ss_pred EEEEEEEEEecCCeEEEeeeccccccccccCccccceeccCCCceEEeecCCCCCEEEEEEEecCccccccCCCCeEEEE
Confidence 888 9999887 677887777788888888887765 333333211100
Q ss_pred ---------ccC-----------CCch---HHHHHhhhccCCCCCchhhHHHhhhhcccccccCCchhhhHHHhhhhHHH
Q psy13068 462 ---------KFD-----------DSSQ---EEYFEAEDQEGQGDSQEDEEMEEQRIEDEEDQEDGNEEIEDERETKMEEE 518 (950)
Q Consensus 462 ---------g~~-----------~~~~---~~~~~~~~~~~~~~pq~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 518 (950)
|.+ ..+. .+++.. ..|+.++..|.++++.....++..++.||++++++++
T Consensus 485 ~a~lYt~~~G~rRiRV~T~~~~~t~~~~~~~~v~~~-------~Dqea~~~llar~a~~~~~~~~~~d~~~~ld~~li~l 557 (769)
T 2nut_A 485 FVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAAS-------FDQEAAAILMARLAIYRAETEEGPDVLRWLDRQLIRL 557 (769)
T ss_dssp EEEEEEETTSCEEEEEEEEEECBCCGGGHHHHHHHT-------BCHHHHHHHHHHHHHHHHTTC---CHHHHHHHHHHHH
T ss_pred EEEEEECCCCCEEEEEEeecccccCCcccHHHHHHh-------cCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 000 0001 123322 2356778889999887777777889999999999999
Q ss_pred HHhhcCCCCCCCCCCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCCCCCccceeeeccCCCCCccccc
Q psy13068 519 CQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLPHYSRFQFLQVFNNSPDETSYYR 598 (950)
Q Consensus 519 ~~~~g~~~~~~p~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~~~~~~~~lqvf~~s~~~~~~~r 598 (950)
|++|+.|.|++|+++.||+++.++|+||++|+||.| ||+||++||++.+.+
T Consensus 558 ~~~~~~Yrk~~~~sl~lp~~lkllP~~~~~L~ks~~-----------------------------l~~~~~spDer~~~~ 608 (769)
T 2nut_A 558 CQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSSF-----------------------------LQVFNNSPDESSYYR 608 (769)
T ss_dssp HHHHCBCCTTCGGGCBCCTTTTTHHHHHHHHHHSTT-----------------------------TCCTTSCHHHHHHHH
T ss_pred HHHHHHHhCcCcccccccHHHHHHHHHHHHHhcccc-----------------------------cCCCCCCccHHHHHH
Confidence 999999999999999999999999999999999998 888999999999999
Q ss_pred cccchHHHHHHHHhhcccccccccCCCCceEeccccccCCceeecccchhhhhhccCCC
Q psy13068 599 HVLMREDLSQSLIMIQPVLYSYGFNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEE 657 (950)
Q Consensus 599 ~~G~~~Al~~A~~ll~p~~~~~~f~gGp~~v~l~s~s~GPG~i~~~d~~~~~~~~~~~~ 657 (950)
+..++..+..++.|++|.++++++.|.|.|+.|++.++.++.|.+.|+||+++||+|+.
T Consensus 609 ~~l~~~~~~~~~~~iyP~L~~~~~~~~P~~v~ls~~~l~~~gi~LLD~g~~i~i~~G~~ 667 (769)
T 2nut_A 609 HHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYHGET 667 (769)
T ss_dssp HHHTTCCHHHHHHHHSCEEEEECSSSSCEECCSSGGGCCTTCEEEEECSSEEEEEECHH
T ss_pred HHHHcCCHHHHHHhhcCEEEeccCCCCCCceeCCHHHccCCCEEEEECCCEEEEEECCc
Confidence 99999999999999999999999988899999999999999999999999999999986
No 9
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=100.00 E-value=6.5e-50 Score=487.53 Aligned_cols=528 Identities=29% Similarity=0.421 Sum_probs=379.5
Q ss_pred ccCCCCceEEeecccCCchhhhhhcccCceeeeecCCCCCCCCCCcccceeeccccccceecccccccccccccCceecc
Q psy13068 10 QNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQGCVSSTLEALWLKS 89 (950)
Q Consensus 10 ~~~~~~~~r~~wn~~p~s~~~~~~~~~p~g~~~~p~~~~~~~p~~~~~p~~c~~~~c~~~~np~~~~~~~~~~~~~w~c~ 89 (950)
++++++|||+|||+||+|+.+++++++|+||+||||++.+++|+++++|+||+|.+|||||||||+ ||.+++.|+||
T Consensus 5 ~~~~~~~vR~T~n~~P~t~~~~~~~~lPlg~vi~P~~~~~~~p~v~~~pvRC~~~~CrayiNPf~~---~~~~~~~W~C~ 81 (768)
T 1m2o_A 5 TNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHCKSILNPYCV---IDPRNSSWSCP 81 (768)
T ss_dssp HHHHHHSEEESBSEEESSHHHHHHTCSCSEEEECTTCCCTTCCEECSCCCBCCSTTTCCBCCTTSC---EETTTTEECCT
T ss_pred cccCcCceEeeeccCCCCHHHHhcCCCCeEEEEEeCCCCCCCCcCCCCCCccCCCCCCeEECCceE---EeCCCCEEEcc
Confidence 388999999999999999999999999999999999999999999999999997669999999999 99999999999
Q ss_pred ccccccCCCccccccc-------------ccceeeeccccccCcccccCcccCCCCCccccccccccccccccchhhhhh
Q psy13068 90 IFFQAEDGIRDRSFGF-------------HNSSVNIVRSVGHGVINHFGFRVGDESKTSRSFRDGILHDNNIYNFTPLFK 156 (950)
Q Consensus 90 ~c~~~n~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (950)
||+++|+...+ ++ .+.||.+.+. ++.+| .|.+|||
T Consensus 82 ~C~~~N~~P~~---y~~~~~~~~~pEL~~~tvEy~~p~~----------------~~~pp-------------~~vFvID 129 (768)
T 1m2o_A 82 ICNSRNHLPPQ---YTNLSQENMPLELQSTTIEYITNKP----------------VTVPP-------------IFFFVVD 129 (768)
T ss_dssp TTCCCCBCCGG---GCC---CCCCGGGTCSEEEEECSCC----------------CCSCC-------------EEEEEEE
T ss_pred cCCCCCCCChH---HccCCcccCChhhccCCEEEECCCC----------------CCCCC-------------EEEEEEE
Confidence 99999997765 33 1112222221 11122 3889999
Q ss_pred hhcCCCCCCccccCCcccccccceeeeeccccc----ccchhhHHHHhhcc-CCCeeeeeccccCCCHHHHhhcccce-E
Q psy13068 157 ECLHPPNGRVLEWNGTRVAHSTLTVQLSLETLK----ISMTTYEEFFYQNE-ERDGIRCTWNVWPSSKLEASRLVMPV-G 230 (950)
Q Consensus 157 ~~~~~~~~~~~~~~~~r~~~st~~~~~~~~~~~----~~~~~~~~~~~~~e-~~~~iR~t~~~~P~t~~~a~k~~~Pl-g 230 (950)
+|+.+.++..++.. |+.+|+.|| ||++||+.+++.++ ..+.+..++.+.++++..+++.+..+ +
T Consensus 130 vs~~~~~l~~l~~s----------l~~~L~~Lp~~~~VGlITf~~~V~~y~l~~~~~~~~~V~~g~k~~~~~q~~~~l~~ 199 (768)
T 1m2o_A 130 LTSETENLDSLKES----------IITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCNVFRGDREYQLEALTEMLTG 199 (768)
T ss_dssp CCSCHHHHHHHHHH----------HHHHHHTSCTTCEEEEEEESSEEEECCCSSSSSEEEEEEETTSCCCHHHHHHHHHS
T ss_pred CCcCHHHHHHHHHH----------HHHHHHhCCCCCEEEEEEECCEEEEEECCCCCCcceeeecCCccccHHHHHHHHhh
Confidence 99998877777766 777777887 99999999999998 55667778888887776666655554 3
Q ss_pred EEeccCCCC-----CCCCCCCCcccccccccccceeeccceEeCCCCeeEecCCCCCCCCchhhhhccccCCCCcccCCC
Q psy13068 231 CLYQPLKEK-----PDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQF 305 (950)
Q Consensus 231 ~~~~Pl~~~-----~~~p~~~~~p~rC~~~~C~aylNP~~~~d~~g~~w~C~~C~~~N~~p~~y~~i~d~~~~~El~~~~ 305 (950)
+.-.+..+. .+ + .-|+.+.. ..++-|...+.. .-..+-+...+ ++
T Consensus 200 l~~~~~~~~~~~~~~~-~---f~p~~~~~---~~~lv~l~e~~~------------------~i~~lL~~L~~---~~-- 249 (768)
T 1m2o_A 200 QKPTGPGGAASHLPNA-M---NKVTPFSL---NRFFLPLEQVEF------------------KLNQLLENLSP---DQ-- 249 (768)
T ss_dssp CCCC-------------------CCSSSG---GGGSEEHHHHHH------------------HHHHHHHTCCC---SC--
T ss_pred ccccccCCcccccccc-c---cccccCCc---cceeeeHHHHHH------------------HHHHHHHhccc---cc--
Confidence 211000000 00 0 00111111 345555443320 00111121111 00
Q ss_pred ceEEEEccCCCCCCCCCCCCcceee--------------cccceEEEEcchhhhhhhcCCCCCCCC--------------
Q psy13068 306 TTIEYTIPVSQCFPKYPLRSLPVFL--------------PFLIQFVFFLAITHLINQVGSPNLPPL-------------- 357 (950)
Q Consensus 306 ~tvEy~~p~~~~~p~~p~~~~pv~l--------------~~~~~fviD~s~~~lk~~~~l~~Lp~~-------------- 357 (950)
|+.. ..++|.|+++.++ ++||+.+..+.++.++++....+.++.
T Consensus 250 ------~~~~--~~~~~~~~~G~Al~~A~~ll~~~~~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~k~~~~~ 321 (768)
T 1m2o_A 250 ------WSVP--AGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQH 321 (768)
T ss_dssp ------SCCC--TTBCCCCCHHHHHHHHHHHHHHHCTTSCCEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHHTCCTT
T ss_pred ------cccC--CCCCCcccHHHHHHHHHHHHhhccCCCCcEEEEEeCCCCCCCCccccccccccccccccccccchhhh
Confidence 1111 1123334433332 289999999998877774433333210
Q ss_pred --------------------CeeeeEeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhhhccCCcCCCCCc
Q psy13068 358 --------------------QYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQF 417 (950)
Q Consensus 358 --------------------~~vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (950)
+..=|++-.+++ .+..+......++|.+++-++|+.+.+.+.+++.+.....+.+.+++
T Consensus 322 ~~~a~~fY~~la~~~~~~gi~VDlF~~~~~~~-dla~l~~l~~~TGG~v~~y~~f~~~~~~~~l~r~l~~~~~~~~~~gf 400 (768)
T 1m2o_A 322 YKKACKFYNQIAQRVAANGHTVDIFAGCYDQI-GMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAF 400 (768)
T ss_dssp HHHHHHHHHHHHHHHHHHTCEEEEEEECSSCC-SHHHHHHHHHHHTCCEEEESCTTSHHHHHHHHHTTCBCTTSSBSCEE
T ss_pred cCchHHHHHHHHHHHHHCCeEEEEEEccCCcc-ChHHHhhHhhcCCceEEEcCCCchHHHHHHHHHHHhhccccccceEE
Confidence 111112222233 34444445667888999999999888888888877766555667888
Q ss_pred c-eEEEeee-------ccceeeeecc-cccceecccccccc----cccCCccccccc----ccCC---------------
Q psy13068 418 T-TIEYTIP-------LLYSITYITE-NDNVIRRNEIHIKP----RICGLQEENIEE----KFDD--------------- 465 (950)
Q Consensus 418 ~-~~e~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~v~~----g~~~--------------- 465 (950)
+ ++++.++ .+|.+...+. ++..++++|+|++. .++.+++..-+. =.+.
T Consensus 401 ~a~mrVr~S~gl~v~~~~G~~~~~~~~~~~~vsd~~ig~~~t~~~~l~~~~~d~t~~v~f~~~~~~~~~~~~~~~~l~~~ 480 (768)
T 1m2o_A 401 NGNMAVKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSAD 480 (768)
T ss_dssp EEEEEEEECTTEEEEEEESSCEECCSCCCSCBCSSCSSBCSCSEEEEEEECTTCCEEEEEEECCC---------------
T ss_pred EEEEEEEecCCceEEEeecCccccccccccccCcceeccCCCceEEeecCCCCCEEEEEEEecccccccccccccccccc
Confidence 8 9999987 6677776665 77888898888775 333333321110 0000
Q ss_pred --------------------------------C-chHHHHHhhhccCCCCCchhhHHHhhhhcccccccCCchhhhHHHh
Q psy13068 466 --------------------------------S-SQEEYFEAEDQEGQGDSQEDEEMEEQRIEDEEDQEDGNEEIEDERE 512 (950)
Q Consensus 466 --------------------------------~-~~~~~~~~~~~~~~~~pq~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 512 (950)
. +..+++.. ..|+.++..|.++++.....++..++.||++
T Consensus 481 ~~~~~~iQ~a~lYt~~~G~rriRV~T~~~~~t~~~~~~v~~~-------~Dqea~~~llar~av~~~~~~~~~d~r~~l~ 553 (768)
T 1m2o_A 481 RPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPAIAAS-------FDQEAAAVLMARIAVHKAETDDGADVIRWLD 553 (768)
T ss_dssp --CEEEEEEEEEEEETTTEEEEEEEEEEEEEECTTCHHHHHT-------BCHHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred CCCcEEEEEEEEEEcCCCCEEEEEEeecccccCccHHHHHHh-------cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 0 02233322 2356788899999888777778899999999
Q ss_pred hhhHHHHHhhcCCCCCCCCCCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCCCCCccceeeeccCCCC
Q psy13068 513 TKMEEECQKFGHYNKDDPHSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLPHYSRFQFLQVFNNSPD 592 (950)
Q Consensus 513 ~~~~~~~~~~g~~~~~~p~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~~~~~~~~lqvf~~s~~ 592 (950)
++++++|++|+.|.|++|+++.||++|.++|+||++|+||.| ||+||++||
T Consensus 554 ~~li~l~~~~~~Yrk~~~~~l~lp~~lk~lP~~~~~L~ks~~-----------------------------l~~~~~spD 604 (768)
T 1m2o_A 554 RTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQF-----------------------------LSVFNNSPD 604 (768)
T ss_dssp HHHHHHHHHHSBCCTTCGGGCBCCTTTTHHHHHHHHHHHSTT-----------------------------TCCTTSCHH
T ss_pred HHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHHHhcccc-----------------------------cCCCCCChh
Confidence 999999999999999999999999999999999999999998 888999999
Q ss_pred CccccccccchHHHHHHHHhhcccccccccCCCCceEeccccccCCceeecccchhhhhhccCCC
Q psy13068 593 ETSYYRHVLMREDLSQSLIMIQPVLYSYGFNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEE 657 (950)
Q Consensus 593 ~~~~~r~~G~~~Al~~A~~ll~p~~~~~~f~gGp~~v~l~s~s~GPG~i~~~d~~~~~~~~~~~~ 657 (950)
++.+.|+..++..+..++.|++|.++++++.|.|.|+.|++.++.++.|.+.|+||+++||+|+.
T Consensus 605 er~~~~~~l~~~~~~~~l~~iyP~L~~~~~~~~P~~v~Ls~~~l~~~gi~LLD~g~~i~i~~G~~ 669 (768)
T 1m2o_A 605 ETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDTFFFILIYHGEQ 669 (768)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHSCEEEEECSSSCCEECCSBGGGCCTTCEEEEECSSEEEEEECHH
T ss_pred HHHHHHHHHHcCCHHHHHHhhCCeEEEecCCCCCcceeCcHHHcCCCCEEEEECCCEEEEEECCc
Confidence 99999999999999999999999999999988899999999999999999999999999999985
No 10
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=100.00 E-value=5.4e-40 Score=398.43 Aligned_cols=491 Identities=14% Similarity=0.200 Sum_probs=316.0
Q ss_pred HHHHhccCCCCceEEeecccCCchhhhhhcccCceeeeecCCCCCCCCCCccc-ceeeccccccceeccccccccccccc
Q psy13068 5 EEFFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYE-PLLCMRNQCRAILNPLCQGCVSSTLE 83 (950)
Q Consensus 5 ~~~~~~~~~~~~~r~~wn~~p~s~~~~~~~~~p~g~~~~p~~~~~~~p~~~~~-p~~c~~~~c~~~~np~~~~~~~~~~~ 83 (950)
.||.|+|.+.++||+|||+||+|+.+++++++|+||+||||++.+++|+++++ |+||+| |||||||||+ | ..+
T Consensus 31 ~~~~~~n~~p~~~R~T~n~iP~t~~~~~~~~lPlg~~i~Pl~~~~~~P~v~~~~p~RC~r--CrayiNPf~~---f-~~~ 104 (751)
T 3eh1_A 31 ADLKKLNCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRS--CRTYINPFVS---F-IDQ 104 (751)
T ss_dssp HHHHHHSCCTTTEEESBSSEESSHHHHHHHCCCCEEEECTTCCCSCCCEECCSCCCBCTT--TCCBCCTTCE---E-SSS
T ss_pred ccccccCCCCCeEEeecccCCCCHHHHHhCCCCeEEEEecCCcCCCCCccCCCCCCcccC--ccCEeCCceE---E-ecC
Confidence 57999999999999999999999999999999999999999999999999875 799996 9999999999 6 457
Q ss_pred CceeccccccccCCCccccc----------------ccccceeeeccccccCcccccCcccCCCCCcccccccccccccc
Q psy13068 84 ALWLKSIFFQAEDGIRDRSF----------------GFHNSSVNIVRSVGHGVINHFGFRVGDESKTSRSFRDGILHDNN 147 (950)
Q Consensus 84 ~~w~c~~c~~~n~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (950)
++|+||||+++|+...+-.. ...+.|+-..+.-.. .++.+|
T Consensus 105 ~~w~Cn~C~~~N~~P~~y~~~~~~~~~~d~~~rpEL~~~tvEy~~p~~y~~------------r~p~pp----------- 161 (751)
T 3eh1_A 105 RRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYML------------RPPQPA----------- 161 (751)
T ss_dssp SEEECTTTCCEEECCGGGC---------CGGGSHHHHCSEEEEEECGGGCS------------SSCCCC-----------
T ss_pred CEEEcccccCCCCCCHHHhcccccccccCcccCchhccceEEEEcChhhhc------------CCCCCc-----------
Confidence 99999999999998776210 011112222111000 011222
Q ss_pred ccchhhhhhhhcCCCC---CCccccCCcccccccceeeeeccccc------ccchhhHHHHhhccCCCeeeeeccccCCC
Q psy13068 148 IYNFTPLFKECLHPPN---GRVLEWNGTRVAHSTLTVQLSLETLK------ISMTTYEEFFYQNEERDGIRCTWNVWPSS 218 (950)
Q Consensus 148 ~~~~~~~~~~~~~~~~---~~~~~~~~~r~~~st~~~~~~~~~~~------~~~~~~~~~~~~~e~~~~iR~t~~~~P~t 218 (950)
.|.+|||.|+...+ +.+++.+ |+.+|+.+| ||++||+.+++.++=.++..
T Consensus 162 --~yvFvIDvs~~a~~~g~l~~~~~s----------l~~~L~~lp~~~~~~VG~ITfd~~vh~y~l~~~~~--------- 220 (751)
T 3eh1_A 162 --VYLFVLDVSHNAVEAGYLTILCQS----------LLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEGLS--------- 220 (751)
T ss_dssp --EEEEEEECSHHHHHHTHHHHHHHH----------HHHHTTTSSCCTTCEEEEEEESSSEEEEECCTTCS---------
T ss_pred --EEEEEEEccHhhhhhhHHHHHHHH----------HHHHHHhcCCCcCcEEEEEEeCCEEEEEECCCCcc---------
Confidence 48889999886554 3333444 666666665 99999999998877433321
Q ss_pred HHHHhhcccceEEEeccCCCCCCCCCCCCcccccccccccceeeccceEeCCCCeeEecCCCCCCCCchhhhhccccCCC
Q psy13068 219 KLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQP 298 (950)
Q Consensus 219 ~~~a~k~~~Plg~~~~Pl~~~~~~p~~~~~p~rC~~~~C~aylNP~~~~d~~g~~w~C~~C~~~N~~p~~y~~i~d~~~~ 298 (950)
+ |--+++.-+.+. -+|.. .+++-|...+. ..-..+-+..
T Consensus 221 -----~---~qmlvv~dl~d~-f~P~~------------~~~lv~l~e~~------------------~~i~~lL~~L-- 259 (751)
T 3eh1_A 221 -----Q---PQMLIVSDIDDV-FLPTP------------DSLLVNLYESK------------------ELIKDLLNAL-- 259 (751)
T ss_dssp -----S---CEEEEESCTTCT-TSCCG------------GGTSEETTTTH------------------HHHHHHHHHG--
T ss_pred -----c---ceeecccccccc-CCCCh------------hhhcccHHHHH------------------HHHHHHHHhh--
Confidence 0 111122111110 01110 12222221111 0000011111
Q ss_pred CcccCCCceEEEEccCCCCCCCCCCCCcceeec----------ccceEEEEcchhhhhhhcCCCC-------------CC
Q psy13068 299 AELHPQFTTIEYTIPVSQCFPKYPLRSLPVFLP----------FLIQFVFFLAITHLINQVGSPN-------------LP 355 (950)
Q Consensus 299 ~El~~~~~tvEy~~p~~~~~p~~p~~~~pv~l~----------~~~~fviD~s~~~lk~~~~l~~-------------Lp 355 (950)
++.. +..+++.++++.+|. ||||.+..+.++.++++....+ +.
T Consensus 260 p~~~--------------~~~~~~~~~~G~AL~aA~~ll~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~~~~ke~~~~~ 325 (751)
T 3eh1_A 260 PNMF--------------TNTRETHSALGPALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQSREDPNQRSSTKVVQHLG 325 (751)
T ss_dssp GGTS--------------TTCSCCCCCHHHHHHHHHHHHTTTCEEEEEEECSCCCSSTTCCCCCCCSCGGGGSSSCTTCS
T ss_pred hHhh--------------cCCCCCccchHHHHHHHHHHhhcCCCEEEEEecCCCCCCCCccccccccccCCCchhhhhhc
Confidence 1111 011223333343332 8999999988877766322211 11
Q ss_pred -CC-Ce--------------eeeEeeccccceEEeecccccCcccceeeeccccCC-------CCchhhhhhhhccCCcC
Q psy13068 356 -PL-QY--------------EPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRN-------AFPPQYAAITEQHQPAE 412 (950)
Q Consensus 356 -~~-~~--------------vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~ 412 (950)
.. .| .=|++-.+++ .+..+......++|.+++.++|+.+ .+.+.+++...
T Consensus 326 ~a~~fY~~la~~~~~~~i~VDlF~~s~~~~-dlatl~~l~~~TGG~v~~y~~F~~~~~~~~~~~f~~dl~r~l~------ 398 (751)
T 3eh1_A 326 PATDFYKKLALDCSGQQTAVDLFLLSSQYS-DLASLACMSKYSAGCIYYYPSFHYTHNPSQAEKLQKDLKRYLT------ 398 (751)
T ss_dssp CSCSHHHHHHHHHHHTTEEEEEEECCSSCC-CHHHHTHHHHTTTCCEEECTTCBTTTBHHHHHHHHHHHHHHHH------
T ss_pred chHHHHHHHHHHHHhcCceEEEEEccCccc-ChHhHHHHHhhcCceEEEeCCcccccchhHHHHHHHHHHHHHh------
Confidence 11 11 1112223333 3444445566788999998888754 34444444322
Q ss_pred CCCCcc-eEEEeee-------ccce-------------------------------------eeee---c--ccccceec
Q psy13068 413 LHPQFT-TIEYTIP-------LLYS-------------------------------------ITYI---T--ENDNVIRR 442 (950)
Q Consensus 413 ~~~~~~-~~e~~~~-------~~~~-------------------------------------~~~~---~--~~~~~~~~ 442 (950)
..++++ ++++.++ .+|. +++. + .+++++|.
T Consensus 399 ~~~gf~a~mrVR~S~glkv~~~~G~~~~~~t~~~~l~~i~~d~s~~v~~~~~~~l~~~~~~~~Q~allYT~~~G~RRiRV 478 (751)
T 3eh1_A 399 RKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRV 478 (751)
T ss_dssp SCCEEEEEEEEEECTTEEEEEEESSSEECSSSEEEEEEECTTCCEEEEEEESSCCCSCSEEEEEEEEEEECTTSCEEEEE
T ss_pred hhhccceEEEEEecCCeEEEEeeCCeEeCCCCceEeccCCCCCEEEEEEEEcCCCCCCCceEEEEEEeeecCCCCEEEEE
Confidence 234444 5555544 1121 1111 1 15555665
Q ss_pred ccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhcccccccCCchhhhHHHhhhhHHHHHhh
Q psy13068 443 NEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIEDEEDQEDGNEEIEDERETKMEEECQKF 522 (950)
Q Consensus 443 ~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 522 (950)
.++.+.+ ..+..+++..+ .|++++..|.++++.....+...++.+|++++++++|++|
T Consensus 479 ~T~~l~v---------------t~~~~~v~~~~-------DqeA~~~llar~av~~~~~~~l~d~r~~l~~~li~il~~Y 536 (751)
T 3eh1_A 479 HTLCLPV---------------VSSLADVYAGV-------DVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAY 536 (751)
T ss_dssp EEEEEEE---------------ECSHHHHHHTB-------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccc---------------cCCHHHHHHhc-------CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 5554443 11223343332 2677888999999888888888899999999999999999
Q ss_pred cCCCCCCCC-CCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCCCCCccceeeeccCCCCCcccccccc
Q psy13068 523 GHYNKDDPH-SFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLPHYSRFQFLQVFNNSPDETSYYRHVL 601 (950)
Q Consensus 523 g~~~~~~p~-s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~~~~~~~~lqvf~~s~~~~~~~r~~G 601 (950)
+.+.++++. ++.||+++.++|+||++|+||.++ .+.|++++|++.+.++..
T Consensus 537 r~~~~~~~~~~l~lpe~lkllP~~~~~L~Ks~~~----------------------------~~~~~~s~Der~~~~~~l 588 (751)
T 3eh1_A 537 GSTVSNLQHSALMAPSSLKLFPLYVLALLKQKAF----------------------------RTGTSTRLDDRVYAMCQI 588 (751)
T ss_dssp HTTCC-----CCEEEGGGTTHHHHHHHHHTSTTT----------------------------CCSSCCCHHHHHHHHHHH
T ss_pred HHhcccCCCccccCcHHHHHHHHHHHHHHccHhh----------------------------cCCCCCChhHHHHHHHHH
Confidence 999876655 699999999999999999999862 225788899999999999
Q ss_pred chHHHHHHHHhhcccccccc---------cCCC--CceEec--cccccCCceeecccchhhhhhccCCC
Q psy13068 602 MREDLSQSLIMIQPVLYSYG---------FNGP--PVPVLL--DTSSIKPDCILLMDTFFQLLIFHGEE 657 (950)
Q Consensus 602 ~~~Al~~A~~ll~p~~~~~~---------f~gG--p~~v~l--~s~s~GPG~i~~~d~~~~~~~~~~~~ 657 (950)
++..+..++.++.|.+++++ +.++ |.|+.| ++.++.+|.|.+.|+||+++||+|+.
T Consensus 589 ~~~~~~~~~~~iyP~L~~~h~l~~~~~~~~~~~~~~~P~~l~ls~~~l~~~giyLlD~g~~i~lw~G~~ 657 (751)
T 3eh1_A 589 KSQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKG 657 (751)
T ss_dssp HHSCHHHHHHHHSCEEEECTTCCSTTCEEETTEEECCCCCBCSSGGGCCTTSEEEEECSSEEEEEECTT
T ss_pred hCCCHHHHHhhccceEEEeecCccccCcccCCCccCCCCcccCCHHHcccCCEEEEECCCEEEEEECCC
Confidence 99999999999999999865 4555 667666 66699999999999999999999987
No 11
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=100.00 E-value=1.2e-38 Score=387.81 Aligned_cols=512 Identities=14% Similarity=0.144 Sum_probs=300.3
Q ss_pred HHHHhccCCCCceEEeecccCCchhhhhhcccCceeeeecCCCCCC----CCCC---cccceeeccccccceeccccccc
Q psy13068 5 EEFFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPD----LPPL---QYEPLLCMRNQCRAILNPLCQGC 77 (950)
Q Consensus 5 ~~~~~~~~~~~~~r~~wn~~p~s~~~~~~~~~p~g~~~~p~~~~~~----~p~~---~~~p~~c~~~~c~~~~np~~~~~ 77 (950)
.-.+|+|.+.++||+|||+||+|+.+++++++|+||+||||++.++ +|++ +++|+||+| |||||||||+
T Consensus 38 ~~~d~gn~~p~~~R~T~n~iP~t~~l~~~~~lPlg~~i~Pl~~~~~~e~p~pvv~~~~~~pvRC~r--CrayiNPf~~-- 113 (770)
T 3efo_B 38 MIQDQGNASPRFIRCTTYCFPCTSDMAKQAQIPLAAVIKPFATIPSNESPLYLVNHGESGPVRCNR--CKAYMCPFMQ-- 113 (770)
T ss_dssp EEECSSSCCTTTEEESBSEEESSHHHHHHHCCCCEEEECTTCCCCTTSCCCCEECCTTTCSCBCTT--TCCBSCTTCE--
T ss_pred eeeecCCCCCCeEEeecccCCCCHHHHHhCCCCeEEEEEcCCCCCcccCCCCcccCCCCCCCccCC--CCCCcCCceE--
Confidence 3356899999999999999999999999999999999999999874 5665 678999996 9999999999
Q ss_pred ccccccCceeccccccccCCCcccccccccceeeeccc--cccCccccc-----Cc---ccCCCCCcccccccccccccc
Q psy13068 78 VSSTLEALWLKSIFFQAEDGIRDRSFGFHNSSVNIVRS--VGHGVINHF-----GF---RVGDESKTSRSFRDGILHDNN 147 (950)
Q Consensus 78 ~~~~~~~~w~c~~c~~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~ 147 (950)
|++++++|+||||+++|+...+ +|..+..+-.|. ...+-..++ .| .....++.+|
T Consensus 114 -f~~~g~~w~Cn~C~~~N~~P~~---Y~~~l~~~g~r~d~~~rpEL~~~tvEf~ap~eY~~~~~~p~pp----------- 178 (770)
T 3efo_B 114 -FIEGGRRYQCGFCNCVNDVPPF---YFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSKPPNPP----------- 178 (770)
T ss_dssp -EEGGGTEEECTTTCCEEECCGG---GCCCCCSSSCTTTGGGSHHHHCSEEEEECCGGGSGGGSCCCCC-----------
T ss_pred -EecCCCEEEeccccccCCCchH---hhccccccccccccccCcccccCceeeecCHHHhccCCCCCCc-----------
Confidence 9999999999999999998877 443322110000 000000000 00 0000122222
Q ss_pred ccchhhhhhhhcCC---CCCCccccCCcccccccceeeeeccccc-----------ccchhhHHHHhhccCCCeeeeecc
Q psy13068 148 IYNFTPLFKECLHP---PNGRVLEWNGTRVAHSTLTVQLSLETLK-----------ISMTTYEEFFYQNEERDGIRCTWN 213 (950)
Q Consensus 148 ~~~~~~~~~~~~~~---~~~~~~~~~~~r~~~st~~~~~~~~~~~-----------~~~~~~~~~~~~~e~~~~iR~t~~ 213 (950)
.|.+|||.|+.. ..+.+++.+ |+.+|+.+| ||++||+.+++.++=..+.
T Consensus 179 --~y~FvIDvs~~av~sg~l~~~~~s----------l~~~L~~lP~~~~~~~~~~~VG~ITfd~~vh~y~l~~~~----- 241 (770)
T 3efo_B 179 --AFIFMIDVSYSNIKNGLVKLICEE----------LKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNL----- 241 (770)
T ss_dssp --EEEEEEECSHHHHHTTHHHHHHHH----------HHHHGGGCCCCTTSSSCSCEEEEEEESSSEEEEECCTTC-----
T ss_pred --EEEEEEEcchhhccchHHHHHHHH----------HHHHHHhCCccccccCccceEEEEEeCCEEEEEeCCCcc-----
Confidence 377788877653 233444444 444555543 8999999998887732211
Q ss_pred ccCCCHHHHhhcccceEEEeccCCCCCCCCCCCCcccccccccccceeeccceEeCCCCeeEecCCCCCCCCchhhhhcc
Q psy13068 214 VWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAIT 293 (950)
Q Consensus 214 ~~P~t~~~a~k~~~Plg~~~~Pl~~~~~~p~~~~~p~rC~~~~C~aylNP~~~~d~~g~~w~C~~C~~~N~~p~~y~~i~ 293 (950)
++ |--+++.-+.+ .-+|..+.-.+.-.. |+..|+-+-. .+|+.|..
T Consensus 242 ---------~q---~q~~vv~d~~d-~f~P~~~~~Lv~l~e--~~~~i~~lL~-----------------~L~~~~~~-- 287 (770)
T 3efo_B 242 ---------AQ---PQMMVVTDVGE-VFVPLLDGFLVNYQE--SQSVIHNLLD-----------------QIPDMFAD-- 287 (770)
T ss_dssp ---------SS---CEEEEECCTTS-CCCCCSSSSSBCTTT--THHHHHHHHH-----------------HHHHHHHT--
T ss_pred ---------cC---ceEEEeccccc-ccCCCccceeeeHHH--HHHHHHHHHH-----------------hhHhhccC--
Confidence 11 11111111110 001111100011111 4433332210 11222110
Q ss_pred ccCCCCcccCCCceEEEEccCCCCCCCCCCCCcceeecccceEEEEc-chhhhhhhcCCCCCC--------------CC-
Q psy13068 294 EQHQPAELHPQFTTIEYTIPVSQCFPKYPLRSLPVFLPFLIQFVFFL-AITHLINQVGSPNLP--------------PL- 357 (950)
Q Consensus 294 d~~~~~El~~~~~tvEy~~p~~~~~p~~p~~~~pv~l~~~~~fviD~-s~~~lk~~~~l~~Lp--------------~~- 357 (950)
....+- ..+.. +-...-.-+ ..=.+|||+.+..+ +.+.++++....+.+ ..
T Consensus 288 --~~~~~t--~~g~a---l~aa~~~l~------~~~~GGkI~~F~s~lP~t~GpG~l~~r~~~~~~~t~ke~~~~~~a~~ 354 (770)
T 3efo_B 288 --SNENET--VFAPV---IQAGMEALK------AADCPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTN 354 (770)
T ss_dssp --CCCCCC--CCHHH---HHHHHHHHH------HHTCCEEEEEEECSCCCSSSTTCCCCCCCCCCSSCSCGGGGGSCSSS
T ss_pred --CCCCcc--hHHHH---HHHHHHHhc------cCCCCcEEEEEecCCCCcCCCccccccccccccCCcchhhhhcchHH
Confidence 000000 00000 000000000 00012666666665 333444422221111 11
Q ss_pred Ce--------------eeeEeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhhhccCCcCCCCCcc-eEEE
Q psy13068 358 QY--------------EPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQFT-TIEY 422 (950)
Q Consensus 358 ~~--------------vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~ 422 (950)
.| .=|++-.+++ .+..+......++|.+++-++|+.+.+.+.+....... ....++++ ++++
T Consensus 355 fY~~lA~~~~~~~i~VDlF~~s~~~v-dlatl~~l~~~TGG~v~~y~~F~~~~~~~~f~~dl~~~--l~~~~gf~a~mrV 431 (770)
T 3efo_B 355 VYDSLAKDCVAHGCSVTLFLFPSQYV-DVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRND--IEKKIGFDAIMRV 431 (770)
T ss_dssp HHHHHHHHHHHTTEEEEEEECCSSCC-CHHHHTHHHHHTTCCEEECTTCCHHHHHHHHHHHHHHH--HHSCEEEEEEEEE
T ss_pred HHHHHHHHHHHcCeEEEEEEecCCcc-ChHHHHHHHhhcCceEEEecCCcchhHHHHHHHHHHHh--hhhceeeeEEEEE
Confidence 11 0111112222 23333334556778888777777554444443222211 11233444 4444
Q ss_pred eee-------ccc-------------------------------------eeeee---c--ccccceecccccccccccC
Q psy13068 423 TIP-------LLY-------------------------------------SITYI---T--ENDNVIRRNEIHIKPRICG 453 (950)
Q Consensus 423 ~~~-------~~~-------------------------------------~~~~~---~--~~~~~~~~~~~~~~~~~~~ 453 (950)
.++ .+| .+++. + .+++++|..++.+.+.
T Consensus 432 R~S~gl~v~~~~G~~~~~~t~~~~l~~~~~d~s~~v~f~~~~~l~~~~~~~~Q~allYt~~~G~RRiRV~T~~l~vt--- 508 (770)
T 3efo_B 432 RTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCS--- 508 (770)
T ss_dssp EECTTEEEEEEESSCBCSSSSCEEEEEEESSCCEEEEEEESSCCBTTTBEEEEEEEEEECTTCCEEEEEEEEEEEEE---
T ss_pred EecCCeEEEEeECCeeCCCCCceEecccCcCceEEEEEEecCCCCCCCcEEEEEEEEEEcCCCCEEEEEEEechhhc---
Confidence 443 111 11111 1 1566666666655431
Q ss_pred CcccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhcccccccCCchhhhHHHhhhhHHH-HHhhcCCCCC--CC
Q psy13068 454 LQEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIEDEEDQEDGNEEIEDERETKMEEE-CQKFGHYNKD--DP 530 (950)
Q Consensus 454 ~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~--~p 530 (950)
.+..+++..++ |++++..|.++++....++ -.+|+++.+++. +++|+.|.|+ +|
T Consensus 509 ------------~~~~~v~~~~D-------qea~~~llar~av~~~~~~----~l~~~r~~L~~~~~~~l~~Yrk~~~~~ 565 (770)
T 3efo_B 509 ------------SQLADLYKSCE-------TDALINFFAKSAFKAVLHQ----PLKVIREILVNQTAHMLACYRKNCASP 565 (770)
T ss_dssp ------------SCHHHHHHTBC-------HHHHHHHHHHHHHHHTTTS----CHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred ------------ccHHHHHHhcC-------HHHHHHHHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 12333443322 6677788888887765544 368888888888 5999999876 35
Q ss_pred CC---CCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCCCCCccceeee-ccCCCCCccccccccchHHH
Q psy13068 531 HS---FQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLPHYSRFQFLQV-FNNSPDETSYYRHVLMREDL 606 (950)
Q Consensus 531 ~s---~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~~~~~~~~lqv-f~~s~~~~~~~r~~G~~~Al 606 (950)
++ +.||+++.++|+||++|+||.+ ||+ |++++|++.+.++..++..+
T Consensus 566 ~s~~ql~Lp~~lkllP~~~~~L~Ks~~-----------------------------l~~~~~~s~Der~~~~~~l~~~~~ 616 (770)
T 3efo_B 566 SAASQLILPDSMKVLPVYMNCLLKNCV-----------------------------LLSRPEISTDERAYQRQLVMTMGV 616 (770)
T ss_dssp CCTTEEEECGGGTTHHHHHHHHHHSGG-----------------------------GSCSSSSCHHHHHHHHHHHHHCCH
T ss_pred CCccceecCHHHHHHHHHHHHHhCcHh-----------------------------hcCCCCCCccHHHHHHHHHHCCCH
Confidence 44 9999999999999999999998 676 77889999999999999999
Q ss_pred HHHHHhhcccccccc-----cCCCCceEeccccccCCceeecccchhhhhhccCCC
Q psy13068 607 SQSLIMIQPVLYSYG-----FNGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEE 657 (950)
Q Consensus 607 ~~A~~ll~p~~~~~~-----f~gGp~~v~l~s~s~GPG~i~~~d~~~~~~~~~~~~ 657 (950)
..++.|+.|.+++++ +.+.|.++.|++.++.+|.|.+.|+||+++||+|+.
T Consensus 617 ~~~l~~iyP~L~~~h~l~~~~~~~P~~v~ls~~~l~~~giyLLD~g~~i~lw~G~~ 672 (770)
T 3efo_B 617 ADSQLFFYPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVS 672 (770)
T ss_dssp HHHHHHHSCEEEECTTCCSSSCSCCCCCCSSGGGCCTTCEEEEECSSEEEEEECTT
T ss_pred HHHHHhhccceEEEeccccccccCCCCcCCcHHHcCCCcEEEEECCcEEEEEecCC
Confidence 999999999999863 445678899999999999999999999999999987
No 12
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=381.61 Aligned_cols=509 Identities=15% Similarity=0.180 Sum_probs=293.6
Q ss_pred HHhccCCCCceEEeecccCCchhhhhhcccCceeeeecCCCCCC----CCCC---cccceeeccccccceeccccccccc
Q psy13068 7 FFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKPD----LPPL---QYEPLLCMRNQCRAILNPLCQGCVS 79 (950)
Q Consensus 7 ~~~~~~~~~~~r~~wn~~p~s~~~~~~~~~p~g~~~~p~~~~~~----~p~~---~~~p~~c~~~~c~~~~np~~~~~~~ 79 (950)
..|+|.+.+.+|+|||+||+|+.+++++++|+||+||||++.++ +|++ +++|+||+| |||||||||+ |
T Consensus 36 ~d~gn~~p~~~R~T~~~iP~t~~l~~~~~lPlg~~i~P~~~~~~~e~~~pvv~~~~~~pvRC~r--CrayiNPf~~---f 110 (766)
T 3eh2_A 36 KDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGESGPLRCNR--CKAYMCPFMQ---F 110 (766)
T ss_dssp ECSSSCCTTTEEESBSEEESSHHHHHHHTCCEEEEECTTCCCCTTSCCCEEECCGGGCCCBCTT--TCCBCCTTCE---E
T ss_pred eccCCCCCceEEcccccCCCCHHHHHhCCCCeEEEEecCCcCcccCCCCCeecCCCCCCCccCC--CCCEeCCceE---E
Confidence 45788999999999999999999999999999999999999874 5555 678999996 9999999999 9
Q ss_pred ccccCceeccccccccCCCcccccccccceeeeccc--cccCccccc-----Cc---ccCCCCCcccccccccccccccc
Q psy13068 80 STLEALWLKSIFFQAEDGIRDRSFGFHNSSVNIVRS--VGHGVINHF-----GF---RVGDESKTSRSFRDGILHDNNIY 149 (950)
Q Consensus 80 ~~~~~~w~c~~c~~~n~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~ 149 (950)
++++++|+||||+++|+...+ +|..+..+-.|. ...+-..++ .+ -....++.+|
T Consensus 111 ~~~g~~w~Cn~C~~~N~~P~~---Y~~~l~~~g~r~d~~~rpEL~~~~vef~a~~eY~~~~~~p~pp------------- 174 (766)
T 3eh2_A 111 IEGGRRFQCCFCSCINDVPPQ---YFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPP------------- 174 (766)
T ss_dssp EGGGTEEECTTTCCEEECCTT---TTGGGGGSSSCCCCSCCHHHHCSEEEEECCGGGSGGGSCCCCC-------------
T ss_pred ecCCCEEEeccccccCCCCHH---HhccccccccccccccCcccccCceeeecCHhhccCCCCCCCC-------------
Confidence 999999999999999998877 543322110000 000000000 00 0000122222
Q ss_pred chhhhhhhhcCC---CCCCccccCCcccccccceeeeeccccc-----------ccchhhHHHHhhccCCCee-eeeccc
Q psy13068 150 NFTPLFKECLHP---PNGRVLEWNGTRVAHSTLTVQLSLETLK-----------ISMTTYEEFFYQNEERDGI-RCTWNV 214 (950)
Q Consensus 150 ~~~~~~~~~~~~---~~~~~~~~~~~r~~~st~~~~~~~~~~~-----------~~~~~~~~~~~~~e~~~~i-R~t~~~ 214 (950)
.|.+|||.|+.. ..+.+++.+ |+.+|+.|| ||++||+.+++.++=..+. ...+..
T Consensus 175 ~y~FvIDvs~~av~sg~l~~~~~s----------i~~~L~~lp~~~~~~~~~~~VG~ITfd~~vh~y~l~~~~~~~q~~v 244 (766)
T 3eh2_A 175 AFIFMIDVSYNAIRTGLVRLLCEE----------LKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMV 244 (766)
T ss_dssp EEEEEEECSHHHHHTTHHHHHHHH----------HHHHGGGCCCCSSCSSCCCEEEEEEESSSEEEEECCTTCSSCEEEE
T ss_pred EEEEEEECchhhccchHHHHHHHH----------HHHHHHhCCcccccCCccceEEEEEeCCEEEEEECCCCCCCceEEE
Confidence 377888888654 333444444 555555554 8999999999887732211 111122
Q ss_pred cCCCHHHHhhcccceEEEeccCCCCCCCCCCCCcccccccccccceeeccceEeCCCCeeEecCCCCCCCCchhhhhccc
Q psy13068 215 WPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITE 294 (950)
Q Consensus 215 ~P~t~~~a~k~~~Plg~~~~Pl~~~~~~p~~~~~p~rC~~~~C~aylNP~~~~d~~g~~w~C~~C~~~N~~p~~y~~i~d 294 (950)
+++.+ .|+ +|..+.-.+. ...|+..|+-+-. .+|+.|..
T Consensus 245 v~dl~-------d~f------------~P~~~~~lv~--l~e~~~~i~~lL~-----------------~L~~~~~~--- 283 (766)
T 3eh2_A 245 VSDVA-------DMF------------VPLLDGFLVN--VNESRAVITSLLD-----------------QIPEMFAD--- 283 (766)
T ss_dssp ECCTT-------TCC------------CCCCTTSSBC--TTTTHHHHHHHHH-----------------HHHHHHTT---
T ss_pred ecChh-------hhc------------cccccceeEe--HHHHHHHHHHHHH-----------------hhhhhccC---
Confidence 22111 010 1111000000 0113333322110 11111100
Q ss_pred cCCCCcccCCCceEEEEccCCCCCCCCCCCCcceeecccceEEEEc-chhhhhhhcCCCC-------------C-CCC-C
Q psy13068 295 QHQPAELHPQFTTIEYTIPVSQCFPKYPLRSLPVFLPFLIQFVFFL-AITHLINQVGSPN-------------L-PPL-Q 358 (950)
Q Consensus 295 ~~~~~El~~~~~tvEy~~p~~~~~p~~p~~~~pv~l~~~~~fviD~-s~~~lk~~~~l~~-------------L-p~~-~ 358 (950)
+++.....+.. +-...-.-+ ..=.+|||+.+..+ +.+.++++....+ + |.. .
T Consensus 284 ---~~~~~t~~g~a---l~aa~~~l~------~~~~GGkI~~F~s~lP~t~GpG~l~~r~~~~~~~sdke~~~~~~a~~f 351 (766)
T 3eh2_A 284 ---TRETETVFVPV---IQAGMEALK------AAECAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGA 351 (766)
T ss_dssp ---CCCCCCCSHHH---HHHHHHHHH------HTTCCEEEEEEECSCCCSSSTTCCCCCCCGGGTTSTTGGGGTSCSSTH
T ss_pred ---CCCCcchHHHH---HHHHHHHhc------cCCCCcEEEEEecCCCCcCCCcccccccccccCCCcchhhhccchHHH
Confidence 00000000000 000000000 00012667777766 4333443211111 1 111 1
Q ss_pred e--------------eeeEeeccccceEEeecccccCcccceeeeccccCCCCchhhhhhhhccCCcCCCCCcc-eEEEe
Q psy13068 359 Y--------------EPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQPAELHPQFT-TIEYT 423 (950)
Q Consensus 359 ~--------------vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~ 423 (950)
| .=|++-.+++ .+..+......++|.+++-++|+.+.+.+.+....... ....++++ ++++.
T Consensus 352 Y~~la~~~~~~~i~VDlF~~s~~~v-dlatl~~l~~~TGG~v~~y~~F~~~~d~~~f~~dl~~~--l~~~~gf~a~mrVR 428 (766)
T 3eh2_A 352 YQTLAKECVAQGCCVDLFLFPNQYV-DVATLSVVPQLTGGSVYKYASFQVENDQERFLSDLRRD--VQKVVGFDAVMRVR 428 (766)
T ss_dssp HHHHHHHHHHHTEEEEEEECCSSCC-CHHHHTHHHHHTTCCEEECTTCCHHHHHHHHHHHHHHH--HHSCEEEEEEEEEE
T ss_pred HHHHHHHHHhCCeEEEEEEecCCCc-ChHHHHHHHhhcCceEEEeCCCcchhHHHHHHHHHHHH--hhhcceeeEEEEEE
Confidence 1 1112222233 34444445667788888888887665444432221111 11234444 45544
Q ss_pred ee-------ccc-------------------------------------eeeee---c--ccccceecccccccccccCC
Q psy13068 424 IP-------LLY-------------------------------------SITYI---T--ENDNVIRRNEIHIKPRICGL 454 (950)
Q Consensus 424 ~~-------~~~-------------------------------------~~~~~---~--~~~~~~~~~~~~~~~~~~~~ 454 (950)
++ .+| .+++. + .+++++|..++.+.+.
T Consensus 429 ~S~glkv~~~~G~~~~~~t~~~~l~~i~~d~s~~v~f~~~~~l~~~~~~~~Q~allYt~~~G~RRiRV~T~~l~vt---- 504 (766)
T 3eh2_A 429 TSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCC---- 504 (766)
T ss_dssp ECTTEEEEEEEESCBCSSSSCEEEEEEETTCCEEEEEEESSCCCTTTCEEEEEEEEEECTTSCEEEEEEEEEEEEE----
T ss_pred ecCCeEEEEeECCeecCCCCceeeccCCCCceEEEEEEecCCCCCCCcEEEEEEEEeEcCCCCEEEEEEEEeeEec----
Confidence 43 111 11111 1 1566666666655431
Q ss_pred cccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhcccccccCCchhhhHHHhhhhHHHH-HhhcCCCCC--CCC
Q psy13068 455 QEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIEDEEDQEDGNEEIEDERETKMEEEC-QKFGHYNKD--DPH 531 (950)
Q Consensus 455 ~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~--~p~ 531 (950)
.+..+++..++ |++++..|.++++....+++ .+..| ..+++.| ++|+.|.|+ +|+
T Consensus 505 -----------~~~~~v~~~~D-------qea~~~llar~av~~~~~~~-~~~~R---~~l~~~~~~~l~~Yrk~~~~~~ 562 (766)
T 3eh2_A 505 -----------TQLADLYRNCE-------TDTLINYMAKFAYRGVLNSP-VKAVR---DTLITQCAQILACYRKNCASPS 562 (766)
T ss_dssp -----------SSHHHHHHTBC-------HHHHHHHHHHHHHHHTTTSC-HHHHH---HHHHHHHHHHHHHHHHHC----
T ss_pred -----------CCHHHHHHhcC-------HHHHHHHHHHHHHHHhhhCC-HHHHH---HHHHHHHHHHHHHHHhhccCCC
Confidence 12233433322 66778888888877655543 33333 4556666 789999776 566
Q ss_pred C---CCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCCCCCccceeee-ccCCCCCccccccccchHHHH
Q psy13068 532 S---FQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLPHYSRFQFLQV-FNNSPDETSYYRHVLMREDLS 607 (950)
Q Consensus 532 s---~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~~~~~~~~lqv-f~~s~~~~~~~r~~G~~~Al~ 607 (950)
+ +.||+++.++|+||++|+||.+ ||+ |++++|++.+.++..++..+.
T Consensus 563 s~~ql~lp~~lkllP~~~~~L~Ks~~-----------------------------l~~~~~~s~Der~~~~~~l~~~~~~ 613 (766)
T 3eh2_A 563 SAGQLILPECMKLLPVYLNCVLKSDV-----------------------------LQPGAEVTTDDRAYVRQLVTSMDVT 613 (766)
T ss_dssp --CCCCCCGGGTTHHHHHHHHHTSTT-----------------------------TSCCTTCCHHHHHHHHHHHHHCCHH
T ss_pred CccceecCHHHHHHHHHHHHHHccHh-----------------------------hcCCCCCCccHHHHHHHHHHCCCHH
Confidence 6 8999999999999999999998 676 577899999999999999999
Q ss_pred HHHHhhcccccccc---cC--CCCceEeccccccCCceeecccchhhhhhccCCC
Q psy13068 608 QSLIMIQPVLYSYG---FN--GPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEE 657 (950)
Q Consensus 608 ~A~~ll~p~~~~~~---f~--gGp~~v~l~s~s~GPG~i~~~d~~~~~~~~~~~~ 657 (950)
.++.|+.|.+++++ +. +.|.|+.|++.++.+|.|.+.|+||+++||+|+.
T Consensus 614 ~~l~~iyP~L~~~h~~~~~~~~~P~~v~ls~~~l~~~giyLlD~g~~i~lw~G~~ 668 (766)
T 3eh2_A 614 ETNVFFYPRLLPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGAS 668 (766)
T ss_dssp HHHHHHSCEEEECSSCCCSCC--CCCBCSSGGGCCTTCEEEEECSSEEEEEECTT
T ss_pred HHHHHHhheEEEeecCCcccccCCCCcCCcHHHcCCCcEEEEEcCcEEEEEecCC
Confidence 99999999999863 54 4677899999999999999999999999999987
No 13
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=100.00 E-value=3.5e-35 Score=361.74 Aligned_cols=493 Identities=14% Similarity=0.084 Sum_probs=304.8
Q ss_pred HHHhccCCCCceEEeecccCCchhhhhhcccCceeeeecCCCCC----CCCCCccc-ceeeccccccceecccccccccc
Q psy13068 6 EFFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKP----DLPPLQYE-PLLCMRNQCRAILNPLCQGCVSS 80 (950)
Q Consensus 6 ~~~~~~~~~~~~r~~wn~~p~s~~~~~~~~~p~g~~~~p~~~~~----~~p~~~~~-p~~c~~~~c~~~~np~~~~~~~~ 80 (950)
...++|++.+|||+|||+||+|+.+++++++|+||+||||++.. .+|+++++ |+||+| |||||||||+ ||
T Consensus 171 ~~d~gn~~p~~vR~T~n~iP~t~~l~~~~~lPlg~vv~P~a~~~~~~~~vpvv~~~~pvRC~r--CrAYiNPf~~---~~ 245 (926)
T 1m2v_B 171 PSELSNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRR--CRSYMNPFVT---FI 245 (926)
T ss_dssp CSSSSSCCTTTEEESBSSEESBHHHHHHHTCCCEEEECSCCSSSTTSSCCCEECSCCCCBCSS--SCCBCCTTCE---EE
T ss_pred cccCCCCCCCceecccccCCCCHHHHHhCCCCeEEEEecCCCcccCCCCCCccCCCCCCccCC--ccCEecCceE---Ee
Confidence 34689999999999999999999999999999999999999863 47777765 999996 9999999999 99
Q ss_pred cccCceeccccccccCCCccccccc------------------ccceeeeccccccCcccccCcccCCCCCccccccccc
Q psy13068 81 TLEALWLKSIFFQAEDGIRDRSFGF------------------HNSSVNIVRSVGHGVINHFGFRVGDESKTSRSFRDGI 142 (950)
Q Consensus 81 ~~~~~w~c~~c~~~n~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (950)
.++++|+||||+++|+...+ ++ .+.||.+.+.-.. .++.+|
T Consensus 246 ~~g~~W~CnfC~~~N~~P~~---Y~~~~~~~~~d~~~RpEL~~~tvEyi~p~ey~~------------r~p~pp------ 304 (926)
T 1m2v_B 246 EQGRRWRCNFCRLANDVPMQ---MDQSDPNDPKSRYDRNEIKCAVMEYMAPKEYTL------------RQPPPA------ 304 (926)
T ss_dssp TTTTEEECTTTCCEEECCGG---GTTTSTTCGGGGGGSHHHHCSEEEEECCGGGCS------------SCCCCC------
T ss_pred CCCCEEEccCCCCCCCCchh---hccccccCccccccCccccCceEEEEcChhhcc------------CCCCCc------
Confidence 99999999999999987665 22 1112222221100 011122
Q ss_pred cccccccchhhhhhhhcCCCCCC---ccccCCcccccccceeeeeccccc-------ccchhhHHHHhhccCCCeeeeec
Q psy13068 143 LHDNNIYNFTPLFKECLHPPNGR---VLEWNGTRVAHSTLTVQLSLETLK-------ISMTTYEEFFYQNEERDGIRCTW 212 (950)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~r~~~st~~~~~~~~~~~-------~~~~~~~~~~~~~e~~~~iR~t~ 212 (950)
.|.+|||+|+...+.. +++.. |..+|+.|| ||++||+.+++.++-..+.+
T Consensus 305 -------vyvFvIDvS~~av~~g~l~~l~~s----------I~~~L~~LP~~~~~~~VGlITFds~Vh~y~l~~~~~--- 364 (926)
T 1m2v_B 305 -------TYCFLIDVSQSSIKSGLLATTINT----------LLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSE--- 364 (926)
T ss_dssp -------BEEEEEECSHHHHHSCHHHHHHHH----------HHHTTTTSCCTTSCCEECEEEESSSEEEEECCCC-----
T ss_pred -------EEEEEEECCHHHHhhhHHHHHHHH----------HHHHHHhCCCCCCCcEEEEEEECCEEEEEecCCccc---
Confidence 3788999998764222 33333 555665554 99999999988887332221
Q ss_pred cccCCCHHHHhhcccceEEEeccCCCCCCCCCCCCcccccccccccceeeccceEeCCCCeeEecCCCCCCCCchhhhhc
Q psy13068 213 NVWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAI 292 (950)
Q Consensus 213 ~~~P~t~~~a~k~~~Plg~~~~Pl~~~~~~p~~~~~p~rC~~~~C~aylNP~~~~d~~g~~w~C~~C~~~N~~p~~y~~i 292 (950)
++++ .+++ |--+++.-+.+. -+|.. ..++-|...+. ..-..+
T Consensus 365 ---g~k~-~~~q---~qmlvvsdl~d~-f~P~~------------~~~Lv~l~e~~------------------~~I~~l 406 (926)
T 1m2v_B 365 ---NNEE-SADQ---INMMDIADLEEP-FLPRP------------NSMVVSLKACR------------------QNIETL 406 (926)
T ss_dssp -----------C---CEEEEECCCSSC-CCSCS------------SSSSEETTTTH------------------HHHHHH
T ss_pred ---CCcc-cccc---hhhccccccccc-cCCCc------------ccccccHHHHH------------------HHHHHH
Confidence 2222 2222 222233222110 01110 12333322111 000000
Q ss_pred cccCCCCcccCCCceEEEEccCCCCCCCCCCCCcceee----------cccceEEEEcchhhhhhhcCCCCCC-------
Q psy13068 293 TEQHQPAELHPQFTTIEYTIPVSQCFPKYPLRSLPVFL----------PFLIQFVFFLAITHLINQVGSPNLP------- 355 (950)
Q Consensus 293 ~d~~~~~El~~~~~tvEy~~p~~~~~p~~p~~~~pv~l----------~~~~~fviD~s~~~lk~~~~l~~Lp------- 355 (950)
.+...+ .. ...+++.++++.+| ++||+.+..+.++.+.++....+.+
T Consensus 407 Le~L~~--~~--------------~~~~~~~~~~G~AL~aA~~lL~~~GGrI~~F~sg~Pt~GpG~l~~re~~~~~~~~k 470 (926)
T 1m2v_B 407 LTKIPQ--IF--------------QSNLITNFALGPALKSAYHLIGGVGGKIIVVSGTLPNLGIGKLQRRNESGVVNTSK 470 (926)
T ss_dssp HHHHHH--HT--------------SSCCCCCCCHHHHHHHHHHHHTTTCEEEEEEESSCCCSSTTCCCCCCC----CCTT
T ss_pred HHhhhh--hh--------------cCCCCCCccHHHHHHHHHHHHHhhCCEEEEEecCCCCCCCCcccccccccccCccc
Confidence 010000 00 00122233333333 2799999999887777633333221
Q ss_pred --------CC-Ce--------------eeeEeeccccceEEeecccccCcccceeeeccccCCCCchhh---hhhhhccC
Q psy13068 356 --------PL-QY--------------EPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQY---AAITEQHQ 409 (950)
Q Consensus 356 --------~~-~~--------------vglit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~ 409 (950)
.. .| .=|++-.+++ .+..+......++|.+++-++|+.+.+++.. .++...
T Consensus 471 e~~~ll~~a~~FYk~LA~~~~~~gisVDlF~~s~~~v-dla~l~~l~~~TGG~v~~y~~F~~~~~~d~~kf~~dl~~~-- 547 (926)
T 1m2v_B 471 ETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYM-DVASLSNLSRFTAGQTHFYPGFSGKNPNDIVKFSTEFAKH-- 547 (926)
T ss_dssp HHHHHTSCSSTHHHHHHHHHHHHTEEEEEEEEESSCC-CHHHHHHHHHTTTCCEEEEESCCTTSHHHHHHHHHHHHHH--
T ss_pred chhhhccchHHHHHHHHHHHHHcCeEEEEEEccCCCc-ChHHHHHHHhcCCceEEEcCCCcchhhhHHHHHHHHHHHH--
Confidence 11 11 1111222233 3344444566788888888888876433221 111110
Q ss_pred CcCCCCCcc-eEEEeee-------ccce------------------------------------eeee---c--ccccce
Q psy13068 410 PAELHPQFT-TIEYTIP-------LLYS------------------------------------ITYI---T--ENDNVI 440 (950)
Q Consensus 410 ~~~~~~~~~-~~e~~~~-------~~~~------------------------------------~~~~---~--~~~~~~ 440 (950)
....++++ ++++.++ .+|. +++. + .+.+++
T Consensus 548 -Lt~~~gf~a~mrVR~S~glkv~~~~G~~~~~~s~~~~l~~l~~d~s~av~f~~~~~l~~~~~~~Q~allYT~~~G~RRi 626 (926)
T 1m2v_B 548 -ISMDFCMETVMRARGSTGLRMSRFYGHFFNRSSDLCAFSTMPRDQSYLFEVNVDESIMADYCYVQVAVLLSLNNSQRRI 626 (926)
T ss_dssp -HHSCCEEEEEEEEEECTTEEEEEEESSSBCSSTTEEEEEEECSSCCEEEEEEECSBCCSSEEEEEEEEEEEETTTEEEE
T ss_pred -hhhhhceeEEEEEEeCCCcEEEEeecCccccCcCceEeeccCCCCEEEEEEEeccCCCCCcEEEEEEEEEEcCCCCEEE
Confidence 11123344 4444443 1111 1111 1 256666
Q ss_pred ecccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhcccccccCCchhhhHHHhhhhHHHHH
Q psy13068 441 RRNEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIEDEEDQEDGNEEIEDERETKMEEECQ 520 (950)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 520 (950)
|+.++.+.+. .+..+++..++ |+.++..|.++++....+++..++.+|+++++++++.
T Consensus 627 RV~T~~l~vt---------------~~l~~v~~s~D-------qea~~~llar~av~~~~~~~~~d~r~~L~~~li~il~ 684 (926)
T 1m2v_B 627 RIITLAMPTT---------------ESLAEVYASAD-------QLAIASFYNSKAVEKALNSSLDDARVLINKSVQDILA 684 (926)
T ss_dssp EEEEEEEEEE---------------SCHHHHHHTBC-------HHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHH
T ss_pred EEEeeccccc---------------CCHHHHHHhcC-------HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Confidence 6666655541 12233433322 6677888999988887778888999999999999977
Q ss_pred hhcCCCCCCCC-------CCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCCCCCccceeeeccCCC-C
Q psy13068 521 KFGHYNKDDPH-------SFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLPHYSRFQFLQVFNNSP-D 592 (950)
Q Consensus 521 ~~g~~~~~~p~-------s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~~~~~~~~lqvf~~s~-~ 592 (950)
.|. |++++ ++.||++|.++|+||++|+||.| |+ ||++| |
T Consensus 685 ~Yr---k~~~~~~~~~~~sl~Lp~~lkllP~~~~~L~KS~~-----------------------------l~-~~~~p~D 731 (926)
T 1m2v_B 685 TYK---KEIVVSNTAGGAPLRLCANLRMFPLLMHSLTKHMA-----------------------------FR-SGIVPSD 731 (926)
T ss_dssp HHH---HHTCCCTTSSSSCCEEEGGGTTHHHHHHHHHTSTT-----------------------------TC-SSCCCHH
T ss_pred HHh---hhcccccCCCCcccccCHHHHHHHHHHHHHhcchh-----------------------------hC-CCCCCcc
Confidence 554 34442 59999999999999999999998 77 77788 8
Q ss_pred CccccccccchHHHHHHHHhhcccccccccC----CC---------------CceEeccccccCCceeecccchhhhhhc
Q psy13068 593 ETSYYRHVLMREDLSQSLIMIQPVLYSYGFN----GP---------------PVPVLLDTSSIKPDCILLMDTFFQLLIF 653 (950)
Q Consensus 593 ~~~~~r~~G~~~Al~~A~~ll~p~~~~~~f~----gG---------------p~~v~l~s~s~GPG~i~~~d~~~~~~~~ 653 (950)
++.+.++..++..+..++.||.|.++++++. |. |.++.|++..+-.+-+.+.|+...+.+|
T Consensus 732 era~~~~~l~~~~~~~l~~~iyP~L~s~h~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lW 811 (926)
T 1m2v_B 732 HRASALNNLESLPLKYLIKNIYPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLW 811 (926)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHSCEEEETTTCCSSCSCC---------CCCCCCCCBCSCSTTCCTTCEEEEECSSEEEEE
T ss_pred HHHHHHHHHHcCCHHHHHHhccCeEEEeccCcccccccccccccccccccccCCcccCcHHHhccCCEEEEECCCEEEEE
Confidence 8888889888889999999999999987654 21 5678899888888888778888899999
Q ss_pred cCCC
Q psy13068 654 HGEE 657 (950)
Q Consensus 654 ~~~~ 657 (950)
.|++
T Consensus 812 vG~~ 815 (926)
T 1m2v_B 812 MGGD 815 (926)
T ss_dssp ECTT
T ss_pred ecCC
Confidence 8886
No 14
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=100.00 E-value=2.7e-35 Score=360.42 Aligned_cols=492 Identities=14% Similarity=0.081 Sum_probs=301.4
Q ss_pred HHhccCCCCceEEeecccCCchhhhhhcccCceeeeecCCCCC----CCCCCccc-ceeeccccccceeccccccccccc
Q psy13068 7 FFYQNEERDGIRCTWNVWPSSKLEASRLVMPVGCLYQPLKEKP----DLPPLQYE-PLLCMRNQCRAILNPLCQGCVSST 81 (950)
Q Consensus 7 ~~~~~~~~~~~r~~wn~~p~s~~~~~~~~~p~g~~~~p~~~~~----~~p~~~~~-p~~c~~~~c~~~~np~~~~~~~~~ 81 (950)
..++|++.+|||+|||+||+|+.+++++++|+||+||||++.. .+|+++++ |+||+| |||||||||+ ||.
T Consensus 56 ~d~~n~~p~~vR~T~n~iP~t~~~~~~~~lPlg~vv~P~~~~~~~~~~~pvv~~~~pvRC~~--CrayiNPf~~---~~~ 130 (810)
T 1pcx_A 56 SELSNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRR--CRSYMNPFVT---FIE 130 (810)
T ss_dssp SGGGSCCTTTEEESBSSEESSHHHHHHHTCCCEEEECSCCSSSTTSSCCCEECSCCCCBCTT--TCCBCCTTCE---EET
T ss_pred ccCCCCCCCceeeecccCCCCHHHHHhCCCCeEEEEecCCccccCCCCCCccCCCCCCccCC--ccCEecCceE---EeC
Confidence 4689999999999999999999999999999999999999863 47777765 999996 9999999999 999
Q ss_pred ccCceeccccccccCCCccccccc------------------ccceeeeccccccCcccccCcccCCCCCcccccccccc
Q psy13068 82 LEALWLKSIFFQAEDGIRDRSFGF------------------HNSSVNIVRSVGHGVINHFGFRVGDESKTSRSFRDGIL 143 (950)
Q Consensus 82 ~~~~w~c~~c~~~n~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (950)
++++|+||||+++|+...+ ++ .+.||.+.+.-.. .++.+|
T Consensus 131 ~g~~W~C~~C~~~N~~P~~---y~~~~~~~~~d~~~RpEL~~~tvEy~~p~~y~~------------~~p~pp------- 188 (810)
T 1pcx_A 131 QGRRWRCNFCRLANDVPMQ---MDQSDPNDPKSRYDRNEIKCAVMEYMAPKEYTL------------RQPPPA------- 188 (810)
T ss_dssp TTTEEECTTTCCEEECCGG---GGC-----CCCGGGSHHHHCSEEEEECCGGGCS------------SCCCCC-------
T ss_pred CCCEEEccCCCCcCCCchh---hccccccCccccccCccccCceEEEEcCchhcc------------CCCCCc-------
Confidence 9999999999999997765 33 1111222111000 011122
Q ss_pred ccccccchhhhhhhhcCCCC---CCccccCCcccccccceeeeeccccc-------ccchhhHHHHhhccCCCeeeeecc
Q psy13068 144 HDNNIYNFTPLFKECLHPPN---GRVLEWNGTRVAHSTLTVQLSLETLK-------ISMTTYEEFFYQNEERDGIRCTWN 213 (950)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~~~st~~~~~~~~~~~-------~~~~~~~~~~~~~e~~~~iR~t~~ 213 (950)
.|.+|||+|+...+ +.+++.. |+.+|+.|| ||++||+.+++.++-..+.+
T Consensus 189 ------~yvFvIDvs~~av~~g~l~~~~~s----------i~~~L~~Lp~~~~~~~VGlITfd~~V~~~~l~~~~~---- 248 (810)
T 1pcx_A 189 ------TYCFLIDVSQSSIKSGLLATTINT----------LLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSE---- 248 (810)
T ss_dssp ------EEEEEEECSHHHHHHTHHHHHHHH----------HHHHTTTSCCTTSCCEEEEEEESSSEEEEECCCGGG----
T ss_pred ------EEEEEEECChHHHhhhHHHHHHHH----------HHHHHHhCCCCCCCcEEEEEEECCEEEEEecCcccc----
Confidence 37888888887532 1233333 555665554 99999999988887332221
Q ss_pred ccCCCHHHHhhcccceEEEeccCCCCCCCCCCCCcccccccccccceeeccceEeCCCCeeEecCCCCCCCCchhhhhcc
Q psy13068 214 VWPSSKLEASRLVMPVGCLYQPLKEKPDLPPLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAIT 293 (950)
Q Consensus 214 ~~P~t~~~a~k~~~Plg~~~~Pl~~~~~~p~~~~~p~rC~~~~C~aylNP~~~~d~~g~~w~C~~C~~~N~~p~~y~~i~ 293 (950)
++++ .+++ |--+++.-+.+. -+| .. ..++-|...+. ..-..+.
T Consensus 249 --g~k~-~~~q---~~mlvv~dl~d~-f~P------~~------~~~Lv~l~e~~------------------~~i~~lL 291 (810)
T 1pcx_A 249 --NNEE-SADQ---INMMDIADLEEP-FLP------RP------NSMVVSLKACR------------------QNIETLL 291 (810)
T ss_dssp --C-----------CEEECCCCTTCC------------------TTTSEETTTTH------------------HHHHHHH
T ss_pred --Cccc-cccc---hhhccccccccc-cCC------Cc------ccccccHHHHH------------------HHHHHHH
Confidence 1111 1222 111122111110 011 00 12333322111 0000000
Q ss_pred ccCCCCcccCCCceEEEEccCCCCCCCCCCCCcceeec----------ccceEEEEcchhhhhhhcCCCC----------
Q psy13068 294 EQHQPAELHPQFTTIEYTIPVSQCFPKYPLRSLPVFLP----------FLIQFVFFLAITHLINQVGSPN---------- 353 (950)
Q Consensus 294 d~~~~~El~~~~~tvEy~~p~~~~~p~~p~~~~pv~l~----------~~~~fviD~s~~~lk~~~~l~~---------- 353 (950)
+...+ .. +..+++.++++.+|. +||+.+.++.++.+.++....+
T Consensus 292 ~~L~~--~~--------------~~~~~~~~a~G~AL~~A~~lL~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~~~~ke 355 (810)
T 1pcx_A 292 TKIPQ--IF--------------QSNLITNFALGPALKSAYHLIGGVGGKIIVVSGTLPNLGIGKLQRRNESGVVNTSKE 355 (810)
T ss_dssp HHHHH--HT--------------TTCCCCCCCHHHHHHHHHHHHTTTCEEEEEEESSCCCSSTTCCCC------------
T ss_pred Hhhhh--hc--------------cCCCCCCccHHHHHHHHHHHHHhcCCEEEEEecCCCCCCCCcccccccccccCcccc
Confidence 10000 00 001222333333332 7999999998877766332222
Q ss_pred ----CC-CC-Cee--------------eeEeeccccceEEeecccccCcccceeeeccccCCCCchhh---hhhhhccCC
Q psy13068 354 ----LP-PL-QYE--------------PLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQY---AAITEQHQP 410 (950)
Q Consensus 354 ----Lp-~~-~~v--------------glit~~~~~s~v~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~~~~~~ 410 (950)
+. .. .|- =|++-.+++ .+..+......++|.+++-.+|+.+.+++.. +++...
T Consensus 356 ~~~l~~~a~~fY~~la~~~~~~gi~VDlF~~s~~~~-dla~l~~l~~~TGG~v~~y~~F~~~~~~d~~~f~~dl~~~--- 431 (810)
T 1pcx_A 356 TAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYM-DVASLSNLSRFTAGQTHFYPGFSGKNPNDIVKFSTEFAKH--- 431 (810)
T ss_dssp --------CCHHHHHHHHHHHTTEEEEEEEEESSCC-CHHHHHHHHHTTTCCEEEEETCCTTSHHHHHHHHHHHHHH---
T ss_pred hhhhcccchHHHHHHHHHHHHCCeEEEEEEccCCcc-ChHHHHHHHhcCCcEEEEcCCCcchhhHHHHHHHHHHHHH---
Confidence 11 11 111 111222233 3333444556788888888888776433221 111100
Q ss_pred cCCCCCcc-eEEEeee-------ccc------------------------------------eeeee---c--cccccee
Q psy13068 411 AELHPQFT-TIEYTIP-------LLY------------------------------------SITYI---T--ENDNVIR 441 (950)
Q Consensus 411 ~~~~~~~~-~~e~~~~-------~~~------------------------------------~~~~~---~--~~~~~~~ 441 (950)
....++++ ++++.++ .+| .+++. + .+++++|
T Consensus 432 l~~~~gf~a~mrVR~S~gl~v~~~~G~~~~~~~~~~~l~~~~~d~s~~v~f~~~~~l~~~~~~~Q~allYt~~~G~RRiR 511 (810)
T 1pcx_A 432 ISMDFCMETVMRARGSTGLRMSRFYGHFFNRSSDLCAFSTMPRDQSYLFEVNVDESIMADYCYVQVAVLLSLNNSQRRIR 511 (810)
T ss_dssp HHCCCCEEEEEEEEECTTEEEEEEESSSBCSSSSEEEESSCCSSCCEEEEEEECSCCCSSEEEEEEEEEEECTTSCEEEE
T ss_pred hhhhcceeEEEEEEcCCCeEEEEeecCccccCcCceEeecCCCCCEEEEEEEeccCCCCCcEEEEEEEEEEcCCCCEEEE
Confidence 01123333 4444333 111 11111 1 2566677
Q ss_pred cccccccccccCCcccccccccCCCchHHHHHhhhccCCCCCchhhHHHhhhhcccccccCCchhhhHHHhhhhHHHHHh
Q psy13068 442 RNEIHIKPRICGLQEENIEEKFDDSSQEEYFEAEDQEGQGDSQEDEEMEEQRIEDEEDQEDGNEEIEDERETKMEEECQK 521 (950)
Q Consensus 442 ~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~pq~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 521 (950)
+.++.+.+. .+..+++..++ |+.++..|.++++....+++..++.+|+++++++++..
T Consensus 512 V~T~~~~vt---------------~~~~~v~~~~D-------qea~~~llar~av~~~~~~~~~d~r~~l~~~li~il~~ 569 (810)
T 1pcx_A 512 IITLAMPTT---------------ESLAEVYASAD-------QLAIASFYNSKAVEKALNSSLDDARVLINKSVQDILAT 569 (810)
T ss_dssp EEEEEEEEE---------------SCHHHHHHTBC-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred EEecCcccc---------------CCHHHHHHhcC-------HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHH
Confidence 766655541 12233333222 66778889999888777777889999999999998775
Q ss_pred hcCCCCCCC-------CCCCCCccccccccccccccccccccccCCCCcchHHHHHHHhhCCCCCccceeeeccCCC-CC
Q psy13068 522 FGHYNKDDP-------HSFQLPENFQMYPQFMYHLRRSQFLQVFNNSPDETSYYRTLLIHLPHYSRFQFLQVFNNSP-DE 593 (950)
Q Consensus 522 ~g~~~~~~p-------~s~~lp~~~~~~~~~~~~l~rs~fL~~l~e~~~~~~~i~~lL~~L~~~~~~~~lqvf~~s~-~~ 593 (950)
|. |+++ +++.||+++.++|+||++|+||.+ || ||++| |+
T Consensus 570 Yr---k~~~~~~~~~~~~l~lp~~lkllP~~~~~L~ks~~-----------------------------l~-~~~~p~De 616 (810)
T 1pcx_A 570 YK---KEIVVSNTAGGAPLRLCANLRMFPLLMHSLTKHMA-----------------------------FR-SGIVPSDH 616 (810)
T ss_dssp HH---HHCC----CCSSCCEEEGGGTTHHHHHHHHHTSTT-----------------------------TC-SSCCCHHH
T ss_pred Hh---hhcccccCCCCcccccCHHHHHHHHHHHHHhcchh-----------------------------cC-CCCCCccH
Confidence 54 3444 259999999999999999999998 77 77888 88
Q ss_pred ccccccccchHHHHHHHHhhcccccccccC---CC----------------CceEeccccccCCceeecccchhhhhhcc
Q psy13068 594 TSYYRHVLMREDLSQSLIMIQPVLYSYGFN---GP----------------PVPVLLDTSSIKPDCILLMDTFFQLLIFH 654 (950)
Q Consensus 594 ~~~~r~~G~~~Al~~A~~ll~p~~~~~~f~---gG----------------p~~v~l~s~s~GPG~i~~~d~~~~~~~~~ 654 (950)
+.+.++..++..+..++.|+.|.++++++. .| |.++.|++..+-.+-+.+.|+...+.+|.
T Consensus 617 r~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G~~i~lwv 696 (810)
T 1pcx_A 617 RASALNNLESLPLKYLIKNIYPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNGNELFLWM 696 (810)
T ss_dssp HHHHHHHHHHSCHHHHHHHHSCEEEECTTCCSSTTSBC--------CCBCCCCBCCSSTTSCCTTCEEEEECSSEEEEEE
T ss_pred HHHHHHHHHcCCHHHHHHhccCEEEEeccCcccccccccccccccccccccCCcccCCHHHhCcCCEEEEECCCEEEEEe
Confidence 888899988889999999999999987653 12 56688998888888787789999999999
Q ss_pred CCC
Q psy13068 655 GEE 657 (950)
Q Consensus 655 ~~~ 657 (950)
|++
T Consensus 697 g~~ 699 (810)
T 1pcx_A 697 GGD 699 (810)
T ss_dssp CTT
T ss_pred CCC
Confidence 986
No 15
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=99.48 E-value=5.2e-15 Score=124.02 Aligned_cols=55 Identities=65% Similarity=1.351 Sum_probs=50.3
Q ss_pred CCCCcccccccccccceeeccceEeCCCCeeEecCCCCCCCCchhhhhccccCCC
Q psy13068 244 PLQYEPLLCMRNQCRAILNPLCQVDYKSKLWVCNFCFQRNAFPPQYAAITEQHQP 298 (950)
Q Consensus 244 ~~~~~p~rC~~~~C~aylNP~~~~d~~g~~w~C~~C~~~N~~p~~y~~i~d~~~~ 298 (950)
+.+++|+||++..|+||||||+++|.+|++|+||||+.+|+||++|+.+++.+.|
T Consensus 4 ~~~~~pvRC~r~~CraylNP~~~~~~~~~~W~C~~C~~~N~~P~~Y~~is~~nlP 58 (59)
T 2yrc_A 4 GSSGEPVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPSYAGISELNQP 58 (59)
T ss_dssp SSCCCCCBCSCTTTCCBCCTTSEEEGGGTEEECSSSCCEEECCSCCSSCHHHHSC
T ss_pred cCCCCCcccCCCCCCeEECCceEEECCCCEEEcccCCCcCCCCHHHhccCcccCC
Confidence 4678999999877999999999999999999999999999999999988777655
No 16
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=99.34 E-value=1.9e-13 Score=114.61 Aligned_cols=44 Identities=39% Similarity=0.703 Sum_probs=41.3
Q ss_pred CcccceeeccccccceecccccccccccccCceeccccccccCCCcc
Q psy13068 54 LQYEPLLCMRNQCRAILNPLCQGCVSSTLEALWLKSIFFQAEDGIRD 100 (950)
Q Consensus 54 ~~~~p~~c~~~~c~~~~np~~~~~~~~~~~~~w~c~~c~~~n~~~~~ 100 (950)
.+++|+||+|.+|||||||||+ ||+++++|+||||+++|+...+
T Consensus 5 ~~~~pvRC~r~~CraylNP~~~---~~~~~~~W~C~~C~~~N~~P~~ 48 (59)
T 2yrc_A 5 SSGEPVLCSRTTCRAVLNPLCQ---VDYRAKLWACNFCYQRNQFPPS 48 (59)
T ss_dssp SCCCCCBCSCTTTCCBCCTTSE---EEGGGTEEECSSSCCEEECCSC
T ss_pred CCCCCcccCCCCCCeEECCceE---EECCCCEEEcccCCCcCCCCHH
Confidence 5789999998779999999999 9999999999999999998877
No 17
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=95.57 E-value=0.012 Score=54.41 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=37.9
Q ss_pred cceEEeccCC--CCcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 902 PVLYSYGFNG--PPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 902 P~L~slh~~g--~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
|+||.++-.+ .-..|+++.++|.++.+||||+|..||+|+|+..+
T Consensus 3 ~rL~~v~g~~~~~~~eV~~~~~sLns~d~FILd~g~~iyvW~G~~s~ 49 (104)
T 1kcq_A 3 QRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSN 49 (104)
T ss_dssp CEEEEEEESSSEEEEEECSSGGGCCTTSEEEEECSSEEEEEECTTCC
T ss_pred cEEEEEECCCcEEEEEecCCHHHcCCCCeEEEeCCCEEEEEeCCCCC
Confidence 7888886222 25668999999999999999999999999999875
No 18
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=94.96 E-value=0.012 Score=55.23 Aligned_cols=46 Identities=28% Similarity=0.339 Sum_probs=38.7
Q ss_pred ccceEEecc--CCCCcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 901 QPVLYSYGF--NGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 901 YP~L~slh~--~g~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
-|+||.+.- ...-..|+++.++|.++.+||||+|..||+|+|+..+
T Consensus 12 ~~rL~~v~G~~~~~~~eV~~~~ssLns~D~FILd~g~~iyvW~G~~ss 59 (114)
T 1svq_A 12 KPRLLHISGDKNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSS 59 (114)
T ss_dssp CEEEEEEECTTSCEEEEECCCSSSCCTTSEEEEEETTEEEECCCTTCC
T ss_pred CcEEEEEECCCcEEEEEecCCHHHcCCCCeEEEecCCEEEEEeCCCCC
Confidence 478888871 2235678999999999999999999999999999865
No 19
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=93.26 E-value=0.061 Score=59.73 Aligned_cols=47 Identities=26% Similarity=0.371 Sum_probs=38.6
Q ss_pred cccceEEec-cCCC--Cccc--ccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 900 IQPVLYSYG-FNGP--PVPV--LLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 900 iYP~L~slh-~~g~--P~~v--~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
..|+||.+. -.|. ...+ +++.+.|.++.+||||+|..||||+|+.++
T Consensus 227 ~~~rLf~~s~~~G~~~v~ev~~~f~q~dL~~~dv~iLD~g~~IfVW~G~~as 278 (344)
T 2fh1_A 227 HPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQ 278 (344)
T ss_dssp CCCEEEEEECTTSSCEEEEECSSCCGGGSCTTSEEEEECSSCEEEEECTTCC
T ss_pred cCCEEEEEEcCCCCEEEEEccCCcCHhHCCCCCEEEEeCCCEEEEEECCCCC
Confidence 679999987 2343 2223 789999999999999999999999999876
No 20
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=93.07 E-value=0.069 Score=60.66 Aligned_cols=47 Identities=21% Similarity=0.407 Sum_probs=38.6
Q ss_pred cccceEEecc-CCC---CcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 900 IQPVLYSYGF-NGP---PVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 900 iYP~L~slh~-~g~---P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
..||||.++. .|. .+..+++.+.|.++.+||||+|..||||+|+.++
T Consensus 281 ~~~rLf~~s~~~G~~~v~EV~~f~Q~dL~~~dv~ILD~g~~IfVW~G~~as 331 (398)
T 3fg7_A 281 ITPRLFECSNKTGRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHAN 331 (398)
T ss_dssp CCCEEEEEECTTSSCEEEECTTCCGGGCCTTSEEEEECSSCEEEEECTTCC
T ss_pred ccCeeEEEEcCCCCEEEEEecccCHHHCCCCCEEEEeCCCEEEEEECCCCC
Confidence 5799998873 343 2223689999999999999999999999999876
No 21
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=92.88 E-value=0.077 Score=58.91 Aligned_cols=47 Identities=19% Similarity=0.260 Sum_probs=39.3
Q ss_pred cccceEEec-cCCC--Cccc----ccccccccCCeEEEEECC--CEEEEEEcCCCC
Q psy13068 900 IQPVLYSYG-FNGP--PVPV----LLDTSSIKPDCILLMDTF--FQLLIFHGEVSN 946 (950)
Q Consensus 900 iYP~L~slh-~~g~--P~~v----~LS~esL~~dgIyLLD~g--~~I~IwvG~~V~ 946 (950)
-.|+||.+. -+|. ...+ +++.+.|.++.+||||+| ..||||+|+.++
T Consensus 246 ~~~rLy~vs~~~G~~~v~ev~~~~~~~q~~L~s~dv~ILD~g~~~~IyVW~G~~a~ 301 (347)
T 1j72_A 246 QAAALYKVSDATGQMNLTKVADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKAN 301 (347)
T ss_dssp CCCEEEEEECTTSSCEEEEEECSSSBCGGGCCTTSEEEEECGGGSEEEEEECTTCC
T ss_pred cCCEEEEEECCCCCEEEEeeccCCCCCHHHcCCCCEEEEecCCCcEEEEEeCCCCC
Confidence 469999987 3443 2334 899999999999999999 999999999876
No 22
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=92.32 E-value=0.098 Score=58.84 Aligned_cols=47 Identities=23% Similarity=0.430 Sum_probs=37.9
Q ss_pred cccceEEecc-CCC--Cccc--ccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 900 IQPVLYSYGF-NGP--PVPV--LLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 900 iYP~L~slh~-~g~--P~~v--~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
.-|+||.++. .|. ...| +++.+.|.++.+||||+|..||||+|+.++
T Consensus 268 ~~~rLf~~s~~~G~~~v~ev~~~f~Q~dL~~~dv~ILD~~~~IfVW~G~~as 319 (371)
T 3fg6_A 268 HPPRLYGCSNKTGRFVIEEIPGEFTQDDLAEDDVMLLDAWEQIFIWIGKDAN 319 (371)
T ss_dssp SCCEEEEEECTTSSCEEEECCSSCCGGGSCTTSEEEEECSSCEEEEECTTCC
T ss_pred cCcEEEEEEcCCCcEEEEEecccccHhHCCCCCEEEEeCCCEEEEEECCCCC
Confidence 3489998872 343 1223 689999999999999999999999999876
No 23
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=89.63 E-value=0.24 Score=60.35 Aligned_cols=50 Identities=20% Similarity=0.275 Sum_probs=40.0
Q ss_pred hccccceEEec-cCCC---Cccc-ccccccccCCeEEEEECCCEEEEEEcCCCCC
Q psy13068 898 IMIQPVLYSYG-FNGP---PVPV-LLDTSSIKPDCILLMDTFFQLLIFHGEVSNA 947 (950)
Q Consensus 898 ~~iYP~L~slh-~~g~---P~~v-~LS~esL~~dgIyLLD~g~~I~IwvG~~V~~ 947 (950)
....||||.++ -.|. .+.. +++.+.|.++.+||||+|..||||+|+.++.
T Consensus 610 ~~~~~rLf~~s~~~G~~~v~ev~~~f~Q~dL~~~dv~iLD~~~eifvWiG~~a~~ 664 (729)
T 1d0n_A 610 DAHPPRLFACSNKIGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQD 664 (729)
T ss_dssp HHSCCEEEEEECTTTCCEEEECCSSCCGGGCCTTSEEEEECSSCEEEEECTTSCH
T ss_pred cccCCeEEEEEcCCCcEEEEEecCcccHhHCCCCCEEEEeCCCEEEEEECCCCCH
Confidence 35689999998 2343 1222 6889999999999999999999999998763
No 24
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=83.11 E-value=0.82 Score=50.62 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=38.0
Q ss_pred ccceEEeccCC--CCcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 901 QPVLYSYGFNG--PPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 901 YP~L~slh~~g--~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
-|+||.++-.. .-..|+++.++|.++.+||||+|..||+|+|+..+
T Consensus 135 ~~rL~~v~G~~~v~~~eV~~~~~sLns~d~FIL~~~~~iy~W~G~~s~ 182 (347)
T 1j72_A 135 VQRLYQVKGKKNIRATERALNWDSFNTGDCFILDLGQNIFAWCGGKSN 182 (347)
T ss_dssp EEEEEEEECSSSCEEEEECSSGGGCBTTSEEEEEETTEEEEEECTTCC
T ss_pred CcEEEEEECCCceEEEEEeeeHHHcCCCceEEEecCCEEEEEECCCCC
Confidence 47888886111 25578899999999999999999999999999865
No 25
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=82.07 E-value=1 Score=49.79 Aligned_cols=46 Identities=15% Similarity=0.234 Sum_probs=38.1
Q ss_pred ccceEEeccCC--C--CcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 901 QPVLYSYGFNG--P--PVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 901 YP~L~slh~~g--~--P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
-|+||.++-+. . -..|+++.++|.++.+||||+|..||+|+|+..+
T Consensus 124 ~~rL~~v~g~~~~~~~~~eV~~~~ssLns~d~FIL~~~~~iyvW~G~~s~ 173 (344)
T 2fh1_A 124 STRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGAS 173 (344)
T ss_dssp SSEEEEEEECTTCCEEEEEECCSGGGCBTTSEEEEECSSCEEEEECTTCC
T ss_pred CceEEEEECCCCCceEEEEecCchhhcCCCceEEEecCCEEEEEECCCCC
Confidence 47899887221 2 4567899999999999999999999999999765
No 26
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=81.01 E-value=1.4 Score=49.36 Aligned_cols=46 Identities=17% Similarity=0.170 Sum_probs=37.9
Q ss_pred ccceEEeccCC----CCcccccccccccCCeEEEEECC-CEEEEEEcCCCC
Q psy13068 901 QPVLYSYGFNG----PPVPVLLDTSSIKPDCILLMDTF-FQLLIFHGEVSN 946 (950)
Q Consensus 901 YP~L~slh~~g----~P~~v~LS~esL~~dgIyLLD~g-~~I~IwvG~~V~ 946 (950)
-|+||.+.-++ .-..|+++.++|.++.+||||+| ..||+|.|+..+
T Consensus 165 ~~rL~~vrg~~~~~vr~~EV~~~~ssLns~d~FILd~~~~~iyvW~G~~ss 215 (371)
T 3fg6_A 165 PTRLFQVRRNLASITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGAS 215 (371)
T ss_dssp CCEEEEEECCSSSCCEEEEECSSGGGCBTTSEEEEECTTSEEEEEECTTCC
T ss_pred ccEEEEEeccCCCceEEEEecCCHHHccCCCeEEEEcCCCeEEEEECCCCC
Confidence 37999887221 14568899999999999999999 999999999865
No 27
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=76.75 E-value=1.8 Score=52.78 Aligned_cols=46 Identities=15% Similarity=0.026 Sum_probs=38.2
Q ss_pred ccceEEecc--CCCCcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 901 QPVLYSYGF--NGPPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 901 YP~L~slh~--~g~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
-|+||.+.= +-.-..|+++.++|.++.+||||+|..||+|.|+..+
T Consensus 133 ~~rL~~vkG~~~v~~~eV~~s~~SLns~DvFILd~g~~iy~W~G~~s~ 180 (729)
T 1d0n_A 133 VQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSN 180 (729)
T ss_dssp CCEEEEEECSSSCEEEEECSSGGGCCSSSEEEEECSSEEEEEECTTCC
T ss_pred CcEEEEEECCCcEEEEEEeccHHHcCCCCeEEEEcCCEEEEEECCCCC
Confidence 478888861 1125678999999999999999999999999999865
No 28
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=59.41 E-value=1.9 Score=48.79 Aligned_cols=46 Identities=11% Similarity=0.161 Sum_probs=0.0
Q ss_pred ccceEEeccCC----CCcccccccccccCCeEEEEECCCEEEEEEcCCCC
Q psy13068 901 QPVLYSYGFNG----PPVPVLLDTSSIKPDCILLMDTFFQLLIFHGEVSN 946 (950)
Q Consensus 901 YP~L~slh~~g----~P~~v~LS~esL~~dgIyLLD~g~~I~IwvG~~V~ 946 (950)
.|+||.+.-.. .-..|+++.++|.++.+||||+|..||+|.|+..+
T Consensus 178 ~~rLf~VrG~~~~~~ra~EV~~s~sSLns~d~FILd~~~~iyvW~G~~ss 227 (398)
T 3fg7_A 178 STRLFQVQGTGANNTKAFEVPARANFLNSNDVFVLKTQSCCYLWCGKGCS 227 (398)
T ss_dssp --------------------------------------------------
T ss_pred CcEEEEEECCCCCceEEEEecCCHHHccCCceEEEEeCCeEEEEeCCCCC
Confidence 36777765111 13468899999999999999999999999998765
No 29
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=48.13 E-value=3.5 Score=35.93 Aligned_cols=20 Identities=25% Similarity=0.760 Sum_probs=17.5
Q ss_pred CCeeEecCCCCCCCCchhhh
Q psy13068 271 SKLWVCNFCFQRNAFPPQYA 290 (950)
Q Consensus 271 g~~w~C~~C~~~N~~p~~y~ 290 (950)
.-.|+|++|...|.+|.+|.
T Consensus 15 ~~tWVCpICsfsN~v~s~fd 34 (76)
T 2j9u_B 15 VSTWVCPICMVSNETQGEFT 34 (76)
T ss_dssp CEEEECTTTCCEEEESSCCC
T ss_pred ccceECccccccCcCccccC
Confidence 35799999999999998884
No 30
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=41.17 E-value=63 Score=34.52 Aligned_cols=39 Identities=15% Similarity=-0.019 Sum_probs=33.2
Q ss_pred HHHHHHHHhhcccEEEEEeccCCCCCchhhhhhhhccCC
Q psy13068 680 YEGLALRAAIVGHAIDIYSCALDQTGLLEMKLCCNATGK 718 (950)
Q Consensus 680 Yk~LA~~~~~~gIsVDLF~~s~~~vdlatl~~L~~~TGG 718 (950)
..++++++.++||.||++.++.+..+-.-|..+++...|
T Consensus 125 l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~Ng 163 (268)
T 4b4t_W 125 LIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNN 163 (268)
T ss_dssp HHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHCS
T ss_pred HHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHHhcC
Confidence 468999999999999999999876677888888877655
No 31
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=34.22 E-value=16 Score=36.24 Aligned_cols=33 Identities=9% Similarity=0.188 Sum_probs=23.3
Q ss_pred EEEEeccCC-CCCchhhhhhhhccCCCcEEEEcCCCCC
Q psy13068 694 IDIYSCALD-QTGLLEMKLCCNATGKPSHVLIAIEFAQ 730 (950)
Q Consensus 694 VDLF~~s~~-~vdlatl~~L~~~TGG~~~v~~y~~F~~ 730 (950)
|.+|+.+.. ..|..+|..++. +| ..|+.++|..
T Consensus 148 v~v~~iGiG~~~~~~~L~~iA~--~~--~~~~~~~~~~ 181 (199)
T 3zqk_A 148 IQVVPIGVGPNANVQELERIGW--PN--APILIQDFET 181 (199)
T ss_dssp EEEEEEEESTTCCHHHHHHHHT--TS--CCEEESCTTT
T ss_pred CEEEEEEcCCCCCHHHHHHHhC--CC--ceEEeCCHHH
Confidence 566666553 688889999987 45 4567777776
No 32
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=32.59 E-value=28 Score=34.61 Aligned_cols=54 Identities=9% Similarity=-0.094 Sum_probs=0.0
Q ss_pred CCCCCCCcceeecccceEEEEcch-------hhhhh--hcCCCCCC---CCCeeeeEeeccccceEEee
Q psy13068 319 PKYPLRSLPVFLPFLIQFVFFLAI-------THLIN--QVGSPNLP---PLQYEPLLCMRNQCRAILNP 375 (950)
Q Consensus 319 p~~p~~~~pv~l~~~~~fviD~s~-------~~lk~--~~~l~~Lp---~~~~vglit~~~~~s~v~~~ 375 (950)
|+.|......--+..|+|+||+|. +.+|. ...++.|+ +..+||+++|+ +..+..
T Consensus 1 pe~P~~~~~C~~~~divfvlD~SgSm~~~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~fs---~~~~~~ 66 (202)
T 1ijb_A 1 SEPPLHDFYCSRLLDLVFLLDGSSRLSEAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYH---DGSHAY 66 (202)
T ss_dssp CCCCSSSCCBCSCEEEEEEEECBTTSCHHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEES---SSEEEE
T ss_pred CCCCCcccCCCCcccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEEEC---CCceEE
No 33
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=27.34 E-value=24 Score=34.41 Aligned_cols=36 Identities=6% Similarity=0.009 Sum_probs=23.3
Q ss_pred cceEEEEcchh-------hhhh--hcCCCCC-CCCCeeeeEeeccc
Q psy13068 333 LIQFVFFLAIT-------HLIN--QVGSPNL-PPLQYEPLLCMRNQ 368 (950)
Q Consensus 333 ~~~fviD~s~~-------~lk~--~~~l~~L-p~~~~vglit~~~~ 368 (950)
-++|++|+|.. .+|. ...++.| |+..+||+++|++.
T Consensus 4 divfvlD~S~Sm~~~~~~~~k~~~~~~~~~l~~~~~rv~vv~fs~~ 49 (179)
T 1mjn_A 4 DLVFLFDGSMSLQPDEFQKILDFMKDVMKKCSNTSYQFAAVQFSTS 49 (179)
T ss_dssp EEEEEEECBTTCCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSS
T ss_pred cEEEEEeCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEEEECCc
Confidence 35699999972 2233 2223334 66689999999943
No 34
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=21.63 E-value=54 Score=31.86 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=0.0
Q ss_pred ceEEEEcch-------hhhhh--hcCCCCC-CCCCeeeeEeeccccceEEee
Q psy13068 334 IQFVFFLAI-------THLIN--QVGSPNL-PPLQYEPLLCMRNQCRAILNP 375 (950)
Q Consensus 334 ~~fviD~s~-------~~lk~--~~~l~~L-p~~~~vglit~~~~~s~v~~~ 375 (950)
++|++|+|. ...+. ...++.| ++..+||+++|+ +..+..
T Consensus 12 iv~vlD~SgSM~~~~~~~~~~~~~~~~~~l~~~~~~v~lv~f~---~~~~~~ 60 (198)
T 1n3y_A 12 IVFLIDGSGSISSRNFATMMNFVRAVISQFQRPSTQFSLMQFS---NKFQTH 60 (198)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHHTTSCTTTEEEEEEEES---SSEEEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHhcCCCCcEEEEEEeC---CCccEE
Done!