RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13076
(423 letters)
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 151 bits (382), Expect = 3e-43
Identities = 147/304 (48%), Positives = 202/304 (66%), Gaps = 5/304 (1%)
Query: 79 EYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAK 138
+F +LPRT RG +VLG P G Y NG SV + + ++IYTEHS VAK
Sbjct: 6 TALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAK 65
Query: 139 YSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE 198
SPSG+Y ASGD+ G VRIWDT HILK GP+KDI+W +++R+ VGEGRE
Sbjct: 66 TSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 125
Query: 199 RFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTK 258
RFGHVF+ +TGTS G ++GQ++ +NS DFKPSRPFRII+GS+DNT+A+FEGPPFKFK T
Sbjct: 126 RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTF 185
Query: 259 QEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA-----HKGGVYAVA 313
EH++FV +VRY+P GS FAS G DG + LY+G + + H G V+ +
Sbjct: 186 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLT 245
Query: 314 WKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSLSGFI 373
W PDGT++ +AS DKT K+W++ T +G ++EDQQ+ +W L+++S +GFI
Sbjct: 246 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 305
Query: 374 SYLD 377
++++
Sbjct: 306 NFVN 309
Score = 71.1 bits (172), Expect = 3e-14
Identities = 38/322 (11%), Positives = 80/322 (24%), Gaps = 40/322 (12%)
Query: 16 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 75
GD + + + + V + T + H+ T SP +G G + W+
Sbjct: 29 GDKIQYCNGTSVYTV-PVGSL-TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWD 86
Query: 76 AKTE-YIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAV 134
+I T G + D + K ++ +
Sbjct: 87 TTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA 146
Query: 135 NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVG 194
ISG + + K + + + +
Sbjct: 147 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAS 206
Query: 195 EGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF 254
G + ++ GT G
Sbjct: 207 TGGDGTIVLYNGVDGT------------------------------------KTGVFEDD 230
Query: 255 KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW 314
+ HS V + +SP G+ ASA D + +++ A+ + + + +
Sbjct: 231 SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI-PVGTRIEDQQLGI 289
Query: 315 KPDGTQLLTASGDKTCKLWDIE 336
L++ S + + E
Sbjct: 290 IWTKQALVSISANGFINFVNPE 311
Score = 44.9 bits (104), Expect = 9e-06
Identities = 12/115 (10%), Positives = 25/115 (21%), Gaps = 45/115 (39%)
Query: 306 KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLL 365
+G + P G ++ +G + + +
Sbjct: 17 RGTAVVLGNTPAGDKIQYCNGT-SVYTVPVGSL--------------------------- 48
Query: 366 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 420
T + H+ T SP +G G + W+
Sbjct: 49 -----------------TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWD 86
Score = 41.8 bits (96), Expect = 9e-05
Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Query: 8 QQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNK-PITALALSPDRGTVFTGS 66
++ G + + S I +V + I + L + + + + S
Sbjct: 242 FGLTWSPDGTKIASASADKTIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 300
Query: 67 HDGFITRWN 75
+GFI N
Sbjct: 301 ANGFINFVN 309
Score = 33.3 bits (74), Expect = 0.044
Identities = 11/31 (35%), Positives = 23/31 (74%)
Query: 2 GNQVEDQQVSCLWQGDYLLTVSLSGFISYLD 32
G ++EDQQ+ +W L+++S +GFI++++
Sbjct: 279 GTRIEDQQLGIIWTKQALVSISANGFINFVN 309
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 133 bits (334), Expect = 3e-36
Identities = 50/320 (15%), Positives = 106/320 (33%), Gaps = 25/320 (7%)
Query: 34 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQP 93
+ GH P+T + P + + S D I W+ +T TL
Sbjct: 4 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ 63
Query: 94 IVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG 153
+ + ++ + + + H V+ P+G +I S
Sbjct: 64 DISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK 123
Query: 154 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVG 213
+++W+ + H ++ + + D + ++ V++ T
Sbjct: 124 TIKMWEVQTGYCVKTFTGHR--EWVRMVRPNQDGTLIASCSN--DQTVRVWVVATKECKA 179
Query: 214 EISGQSKPINSCDFKPSRPFRII-------------------TGSEDNTIAVFEGPPFKF 254
E+ + + P + I +GS D TI +++
Sbjct: 180 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 239
Query: 255 KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW 314
MT H +V+ V + G S D + ++D + + L AH+ V ++ +
Sbjct: 240 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLDF 297
Query: 315 KPDGTQLLTASGDKTCKLWD 334
++T S D+T K+W+
Sbjct: 298 HKTAPYVVTGSVDQTVKVWE 317
Score = 66.3 bits (160), Expect = 9e-13
Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 4/174 (2%)
Query: 250 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV 309
P K H V V + P S SA D + ++D + D L H V
Sbjct: 5 PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL--KGHTDSV 62
Query: 310 YAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSL 369
+++ G L + S D T KLWD + + G+ VS + GD++++ S
Sbjct: 63 QDISFDHSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVSIMPNGDHIVSASR 121
Query: 370 SGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
I +V ++ GH + + + + D + + S+D + W T
Sbjct: 122 DKTIKMWEVQTG-YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 174
Score = 47.4 bits (111), Expect = 2e-06
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 379 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
+ GH P+T + P + + S D I W+ +T
Sbjct: 4 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET 48
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 129 bits (323), Expect = 1e-34
Identities = 93/320 (29%), Positives = 147/320 (45%), Gaps = 20/320 (6%)
Query: 79 EYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIEN-----PAISDIYTEHSCA 133
+ I P TQR L DP Y G S +R +++ P + S
Sbjct: 6 KEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSV 65
Query: 134 VNVAKYSP--SGFYIASGDISGKVRIWDTVNKEHIL------KNEFHPIGGPIKDIAWSP 185
V K+SP Y+ SGD SGKV +W + K+EF + GPI DI+W
Sbjct: 66 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF 125
Query: 186 DNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIA 245
+ +R+ VVGEGR+ FG ++G S+GE+SG S+ IN+C K SRP R +T +D ++
Sbjct: 126 EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVV 185
Query: 246 VFEGPPFK---FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVF--LYDGASADLVSEL 300
++GPPFK T + FV+ V +SP F + + L
Sbjct: 186 FYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 245
Query: 301 GNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEF-LMGNQVEDQQVSCLW 359
+ G D + T D T ++WD+ T V ++ L Q+ +QQV +
Sbjct: 246 DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA 305
Query: 360 QGD-YLLTVSLSGFISYLDV 378
G+ ++++SL G +++ ++
Sbjct: 306 TGNGRIISLSLDGTLNFYEL 325
Score = 68.4 bits (165), Expect = 2e-13
Identities = 34/331 (10%), Positives = 81/331 (24%), Gaps = 45/331 (13%)
Query: 16 GDYLLTVSL-SGFISYLDVNNPST-PIRVIKGHN-KPITALALSPDRG--TVFTGSHDGF 70
+ + S F+ LD + P+ GH +T + SP +G + +G G
Sbjct: 29 TNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGK 88
Query: 71 ITRWNAKTEYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEH 130
+ W + ++ + + +
Sbjct: 89 VIVWGWTFDKESNSVEVNVKSE----------------------------------FQVL 114
Query: 131 SCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRM 190
+ ++ + G + E I
Sbjct: 115 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMR 174
Query: 191 VVVGEGRERFGHVFMSETGTSVGEI-----SGQSKPINSCDFKPSRPFRIITGSEDNTIA 245
+ S + + + + + + +
Sbjct: 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 234
Query: 246 VFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAH 305
G K+ QE + FA+ G D + ++D ++ V +
Sbjct: 235 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ 294
Query: 306 KGGVYAVAWKPDGT-QLLTASGDKTCKLWDI 335
+ G V G ++++ S D T +++
Sbjct: 295 QLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 36.8 bits (83), Expect = 0.004
Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 4/67 (5%)
Query: 12 CLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALS---PDRGTVFTGSHD 68
TV I DV S ++ + + + G + + S D
Sbjct: 259 SWLDSQKFATVGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317
Query: 69 GFITRWN 75
G + +
Sbjct: 318 GTLNFYE 324
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 126 bits (316), Expect = 2e-33
Identities = 52/298 (17%), Positives = 90/298 (30%), Gaps = 6/298 (2%)
Query: 39 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGG 98
R ++GH I A+ D + + S DG + W++ T +P
Sbjct: 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA 106
Query: 99 DPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW 158
N I N++ + + S
Sbjct: 107 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTC 166
Query: 159 DTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQ 218
+ E + + R+ V G + ++ G +G
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC-DASAKLWDVREGMCRQTFTGH 225
Query: 219 SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF--VQAVRYSPSGSH 276
IN+ F P+ TGS+D T +F+ + MT + + +V +S SG
Sbjct: 226 ESDINAICFFPNGNA-FATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL 284
Query: 277 FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD 334
+ D ++D AD L H V + DG + T S D K+W+
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVL--AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 124 bits (312), Expect = 7e-33
Identities = 57/292 (19%), Positives = 101/292 (34%), Gaps = 6/292 (2%)
Query: 130 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR 189
H + + + S GK+ IWD+ + + + A++P
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV--HAIPLRSSWVMTCAYAPSGNY 111
Query: 190 MVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG 249
+ G + + G + +I+T S D T A+++
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171
Query: 250 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV 309
+ T H+ V ++ +P F S D L+D H+ +
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF--TGHESDI 229
Query: 310 YAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVED-QQVSCLWQGDYLLTVS 368
A+ + P+G T S D TC+L+D+ + + N + VS G LL
Sbjct: 230 NAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGY 289
Query: 369 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 420
+ D V+ GH+ ++ L ++ D V TGS D F+ WN
Sbjct: 290 DDFNCNVWDALKA-DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 99.0 bits (245), Expect = 9e-24
Identities = 42/278 (15%), Positives = 81/278 (29%), Gaps = 7/278 (2%)
Query: 16 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 75
L++ S G + D + I + + A +P V G D + +N
Sbjct: 67 SRLLVSASQDGKLIIWDSYTT-NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 76 AKTEYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGN---SVIIRNIENPAISDIYTEHSC 132
KT + R G L + + + + +IE + +T H+
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG 185
Query: 133 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV 192
V +P SG ++WD H I I + P+
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE--SDINAICFFPNGNAFAT 243
Query: 193 VGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF 252
+ ++ I S F S ++ G +D V++
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL-LLAGYDDFNCNVWDALKA 302
Query: 253 KFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYD 290
H V + + G A+ +D + +++
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 57.1 bits (136), Expect = 1e-09
Identities = 31/215 (14%), Positives = 62/215 (28%), Gaps = 47/215 (21%)
Query: 250 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV 309
+ + T + H + A+ + SA DGK+ ++D + + V + P V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI--PLRSSWV 100
Query: 310 YAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFL------------------------ 345
A+ P G + D C +++++T+
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160
Query: 346 --------------------MGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPI 385
G+ + +S ++ + DV
Sbjct: 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG-MCR 219
Query: 386 RVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 420
+ GH I A+ P+ TGS D ++
Sbjct: 220 QTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254
Score = 44.3 bits (103), Expect = 2e-05
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 384 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
R ++GH I A+ D + + S DG + W++ T
Sbjct: 47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT 86
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 120 bits (301), Expect = 4e-31
Identities = 67/427 (15%), Positives = 136/427 (31%), Gaps = 86/427 (20%)
Query: 38 TPIRVIKGHNKPITALALSPDR---GTVFTGSHDGFITRWNAKTEYIFA-TLPRTQRGQP 93
P H+KPI L D + + +N L ++
Sbjct: 4 VPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSL---- 59
Query: 94 IVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG 153
+H+ V K+S G Y+A+G +
Sbjct: 60 -----------------------------------DHTSVVCCVKFSNDGEYLATGC-NK 83
Query: 154 KVRIWDTVNKEHILKNEFHPIG----------------GPIKDIAWSPDNQRMVVVGEGR 197
+++ + + + I+ + +SPD + + G
Sbjct: 84 TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT---GA 140
Query: 198 ERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMT 257
E + I + ++++GS D T+ +++ + +T
Sbjct: 141 EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT 200
Query: 258 KQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP-----AHKGGVYAV 312
G + A+ D V ++D + LV L + HK VY+V
Sbjct: 201 LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 260
Query: 313 AWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQ-----------G 361
+ DG +++ S D++ KLW+++ + S+ N + +
Sbjct: 261 VFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND 320
Query: 362 DYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALA------LSPDRGTVFTGSHDGF 415
+Y+L+ S + + D + P+ +++GH + ++A L P+ TGS D
Sbjct: 321 EYILSGSKDRGVLFWDKKS-GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 379
Query: 416 ITRWNAK 422
W K
Sbjct: 380 ARIWKYK 386
Score = 93.3 bits (230), Expect = 2e-21
Identities = 56/341 (16%), Positives = 107/341 (31%), Gaps = 47/341 (13%)
Query: 7 DQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS 66
++ D L LS S + + + + I ++ SPD + TG+
Sbjct: 82 NKTTQVYRVSDGSLVARLSDD-SAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 140
Query: 67 HDGFITRWNAKTEYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDI 126
D I W+ + I L ++ + K + +V I ++ S
Sbjct: 141 EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT 200
Query: 127 YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG-----GPIKDI 181
+ VA G YIA+G + VR+WD+ + + + + +
Sbjct: 201 LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 260
Query: 182 AWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSED 241
++ D Q +V R + + + +
Sbjct: 261 VFTRDGQSVVSGSLDRS-----------------------VKLWNLQNANNKSDS----- 292
Query: 242 NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELG 301
++T H FV +V + + + S D V +D S + + L
Sbjct: 293 -----KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML- 346
Query: 302 NPAHKGGVYAVA------WKPDGTQLLTASGDKTCKLWDIE 336
H+ V +VA P+ T SGD ++W +
Sbjct: 347 -QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 66.7 bits (161), Expect = 1e-12
Identities = 42/270 (15%), Positives = 80/270 (29%), Gaps = 68/270 (25%)
Query: 221 PINSCDFKPSRPFRIITGSEDNTIAVFE-GPPFKFKMTKQ---EHSRFVQAVRYSPSGSH 276
P D + ++ ++ P + + +H+ V V++S G +
Sbjct: 17 PPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEY 76
Query: 277 FASAGFDGKVFLYDGASADLVSEL----------------GNPAHKGGVYAVAWKPDGTQ 320
A+ G + +Y + LV+ L +P+ + +V + PDG
Sbjct: 77 LAT-GCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 135
Query: 321 LLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQ-------------------- 360
L T + D+ ++WDIE + V Q
Sbjct: 136 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 195
Query: 361 ---------------------GDYLLTVSLSGFISYLDVNNPS------TPIRVIKGHNK 393
G Y+ SL + D + GH
Sbjct: 196 QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 255
Query: 394 PITALALSPDRGTVFTGSHDGFITRWNAKT 423
+ ++ + D +V +GS D + WN +
Sbjct: 256 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 285
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 96.8 bits (239), Expect = 6e-23
Identities = 58/385 (15%), Positives = 112/385 (29%), Gaps = 64/385 (16%)
Query: 34 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQP 93
+V+KGH+ + L + +GS D + W+A T TL
Sbjct: 3 RGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-------- 53
Query: 94 IVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISG 153
H+ V ++ + S D +
Sbjct: 54 ----------------------------------VGHTGGVWSSQMRDNIIISGSTDRTL 79
Query: 154 KVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVG 213
KV +T H L + R + G G
Sbjct: 80 KVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHV-- 137
Query: 214 EISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPS 273
+ R+++G+ D + V++ T Q H+ V
Sbjct: 138 ---------AAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY--SLQFD 186
Query: 274 GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLW 333
G H S D + ++D + + + H+ + K + L++ + D T K+W
Sbjct: 187 GIHVVSGSLDTSIRVWDVETGNCIHT--LTGHQSLTSGMELKDN--ILVSGNADSTVKIW 242
Query: 334 DIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNP----STPIRVIK 389
DI+T + N+ + + ++++T S G + D+ +
Sbjct: 243 DIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG 302
Query: 390 GHNKPITALALSPDRGTVFTGSHDG 414
G + + S + GS +G
Sbjct: 303 GSGGVVWRIRASNTKLVCAVGSRNG 327
Score = 91.0 bits (224), Expect = 7e-21
Identities = 43/338 (12%), Positives = 112/338 (33%), Gaps = 25/338 (7%)
Query: 6 EDQQVSCL-WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT 64
+D ++CL + G+ +++ S + +R + GH + + + + +
Sbjct: 16 DDHVITCLQFCGNRIVSGSDDNTLKVWSAVT-GKCLRTLVGHTGGVWSSQMRDNIIISGS 74
Query: 65 GSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAIS 124
+ + + + + ++ + +IE
Sbjct: 75 TDRTLKVWNAETGECIHT----LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL 130
Query: 125 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS 184
+ H AV +Y + D V++WD + + + H + +
Sbjct: 131 HVLMGHVAAVRCVQYDGRRVVSGAYD--FMVKVWDPETETCLHTLQGHTN----RVYSLQ 184
Query: 185 PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTI 244
D +V + V+ ETG + ++G + + K + +++G+ D+T+
Sbjct: 185 FDGIHVVSGS--LDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI---LVSGNADSTV 239
Query: 245 AVFEGPPFKFKMTKQEHSRFV-QAVRYSPSGSHFASAGFDGKVFLYDGASADLVSEL--- 300
+++ + T Q ++ + + ++ DG V L+D + + + L
Sbjct: 240 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL 299
Query: 301 GNPAHKGGVYAVAWKPDGTQLLTASGDKT----CKLWD 334
+ G V+ + S + T + D
Sbjct: 300 ESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 82.9 bits (203), Expect = 3e-18
Identities = 45/298 (15%), Positives = 96/298 (32%), Gaps = 19/298 (6%)
Query: 126 IYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSP 185
+ H V G I SG +++W V + + H G +
Sbjct: 11 VLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT--GGVWSSQMRD 67
Query: 186 DNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIA 245
+ + I ++ R+++GS D T+
Sbjct: 68 NIIIS-------GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 246 VFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAH 305
V++ + H V+ V+Y S +D V ++D + + L +
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGR--RVVSGAYDFMVKVWDPETETCLHTLQGHTN 178
Query: 306 KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLL 365
+ + DG +++ S D + ++WD+ET + + + + + L+
Sbjct: 179 ----RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---TGHQSLTSGMELKDNILV 231
Query: 366 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
+ + + D+ + + L ++ V T S DG + W+ KT
Sbjct: 232 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 289
Score = 40.6 bits (93), Expect = 2e-04
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 379 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
+V+KGH+ + L + +GS D + W+A T
Sbjct: 3 RGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVT 46
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 94.2 bits (232), Expect = 8e-22
Identities = 48/349 (13%), Positives = 95/349 (27%), Gaps = 34/349 (9%)
Query: 16 GDYLLTVSLSGFISYLDV-NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW 74
+ + + + N + +K HN +T + +PD + T D W
Sbjct: 19 RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 78
Query: 75 NAKTEYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNS------VIIRNIENPAISDIYT 128
K TL + + + S + + I
Sbjct: 79 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK 138
Query: 129 EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE----------------HILKNEFH 172
V + P+ +A+G K RI+ KE L E
Sbjct: 139 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS 198
Query: 173 PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRP 232
G + + +S + R+ V V +++ + + S+ +
Sbjct: 199 SSCGWVHGVCFSANGSRVAWVSH----DSTVCLADADKKMAVATLASETLPLLAVTFITE 254
Query: 233 FRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGA 292
++ D +F K++ + + D K A
Sbjct: 255 SSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 314
Query: 293 SADLVSELGNPAHKGGVYAVAWKPDG----TQLLTASGDKTCKLWDIET 337
+A + HK V ++ G +Q T D +WD+ +
Sbjct: 315 AAG---AGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360
Score = 80.7 bits (197), Expect = 3e-17
Identities = 49/401 (12%), Positives = 102/401 (25%), Gaps = 69/401 (17%)
Query: 46 HNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGGDPKGKNF 105
+PI+ A + DR + ++ + +
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-------------------------- 39
Query: 106 LYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEH 165
EH+ V ++P I + +W +
Sbjct: 40 --------------KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 85
Query: 166 ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPIN-S 224
I + + W+P+ ++ V R F E V + +
Sbjct: 86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL 145
Query: 225 CDFKPSRPFRIITGSEDNTIAVFEG------------------PPFKFKMTKQEHSRFVQ 266
+ GS D +F P + +V
Sbjct: 146 SLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVH 205
Query: 267 AVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG 326
V +S +GS A D V L D V+ + + AV + + L+ A
Sbjct: 206 GVCFSANGSRVAWVSHDSTVCLADADKKMAVAT--LASETLPLLAVTFITES-SLVAAGH 262
Query: 327 DKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIR 386
D L+ ++ + F D +G + + +
Sbjct: 263 DCFPVLFTYDSAAGKLSF---GGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 319
Query: 387 VIKGHNKPITALALSPDRGT----VFTGSHDGFITRWNAKT 423
+ H ++ +++ T DG ++ W+ ++
Sbjct: 320 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360
Score = 35.2 bits (79), Expect = 0.013
Identities = 7/76 (9%), Positives = 22/76 (28%), Gaps = 4/76 (5%)
Query: 7 DQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGT----V 62
D +G + + + + H ++ +++
Sbjct: 285 DVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQF 344
Query: 63 FTGSHDGFITRWNAKT 78
T DG ++ W+ ++
Sbjct: 345 CTTGMDGGMSIWDVRS 360
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 92.0 bits (226), Expect = 2e-21
Identities = 54/297 (18%), Positives = 94/297 (31%), Gaps = 5/297 (1%)
Query: 40 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGGD 99
+V GHNK ITAL+ S D T+F+ +G I W+ T P + G
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATM--ITGIK 62
Query: 100 PKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD 159
K L+T ++ + PA N P G +++ +
Sbjct: 63 TTSKGDLFTVSWDDHLKVV--PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 120
Query: 160 TVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQS 219
+ K PI +A S D Q + V G+ + + + + V I +
Sbjct: 121 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPA 180
Query: 220 KPINSCDFKPSRPFRIITGSEDNTIAVFE-GPPFKFKMTKQEHSRFVQAVRYSPSGSHFA 278
+ + S + H+ V V +SP A
Sbjct: 181 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA 240
Query: 279 SAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI 335
+ D V +++ + AH + T +++A D K W++
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 53.5 bits (126), Expect = 2e-08
Identities = 11/56 (19%), Positives = 20/56 (35%)
Query: 305 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQ 360
H + A++ DG L +A + WDI T + F + + +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 66
Score = 48.8 bits (114), Expect = 5e-07
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 385 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
+V GHNK ITAL+ S D T+F+ +G I W+ T
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIST 43
Score = 36.5 bits (82), Expect = 0.004
Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 12 CLWQGDYLLTVSLSGFISYLDVNNPS-TPIRVIKGHNKPITALALSPDRGTVFTGSHDGF 70
L T SL + ++N PS PI + H + + T+ + D
Sbjct: 232 WSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSN 291
Query: 71 ITRWN 75
I WN
Sbjct: 292 IKFWN 296
Score = 31.5 bits (69), Expect = 0.18
Identities = 28/249 (11%), Positives = 57/249 (22%), Gaps = 7/249 (2%)
Query: 176 GPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS-GQSKPINSCDFKPSRPFR 234
I ++ S D + + E + + TG S + I
Sbjct: 13 KAITALSSSADGKTLFSADA--EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF 70
Query: 235 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA 294
++ + + G + A A + +Y
Sbjct: 71 TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS---- 126
Query: 295 DLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQ 354
++ A++ + + S V + ++
Sbjct: 127 HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVA 186
Query: 355 VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG 414
S S + N H + ++ SPD + TGS D
Sbjct: 187 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDN 246
Query: 415 FITRWNAKT 423
+ WN
Sbjct: 247 SVIVWNMNK 255
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 89.5 bits (220), Expect = 2e-20
Identities = 39/295 (13%), Positives = 85/295 (28%), Gaps = 12/295 (4%)
Query: 45 GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQ----RGQPIVLGGDP 100
H + + A+ +S V+TG G + W+ + + + P
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 101 KGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDT 160
G L G + + + A + + A Y+ + + S
Sbjct: 108 DGC-TLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 161 VNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSK 220
V H G N + G + + + +
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE-GRQLQQHDFTS 225
Query: 221 PINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASA 280
I S + P+ + + +++ K H V +++++ G F S
Sbjct: 226 QIFSLGYCPTGEWLAVG--MESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVST 283
Query: 281 GFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI 335
G D + + + + V + D ++T SGDK ++++
Sbjct: 284 GKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 82.2 bits (201), Expect = 7e-18
Identities = 42/295 (14%), Positives = 92/295 (31%), Gaps = 12/295 (4%)
Query: 129 EHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVN---KEHILKNEFHPIGGPIKDIAWSP 185
H V S ++ +G G V++WD + K + + + I+ P
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 186 DNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIA 245
D ++V GE + T E++ + + P S+ N
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA- 166
Query: 246 VFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAH 305
V++ Q H+ + S G+ + G D V +D + +
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD---F 223
Query: 306 KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLL 365
++++ + P G L ++ + L ++ + + G + +
Sbjct: 224 TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP--DKYQLHLHESCVLSLKFAYCGKWFV 281
Query: 366 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 420
+ ++ I + + + +S D + TGS D T +
Sbjct: 282 STGKDNLLNAWRTPY-GASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 43.3 bits (100), Expect = 3e-05
Identities = 13/116 (11%), Positives = 26/116 (22%), Gaps = 43/116 (37%)
Query: 46 HNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGGDPKGKNF 105
H + +L + + D + W G I
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY------------GASIFQ--------- 302
Query: 106 LYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTV 161
++ S +V S YI +G K +++ +
Sbjct: 303 ----------------------SKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 85.8 bits (210), Expect = 2e-19
Identities = 46/297 (15%), Positives = 94/297 (31%), Gaps = 15/297 (5%)
Query: 39 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGG 98
++ I GHNK ITAL ++P + +GS+DG I W++ + + IV
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-------QDHSNLIVSLD 53
Query: 99 DPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW 158
+ K + + + + + N + + A N + +
Sbjct: 54 NSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDI 113
Query: 159 DTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQ 218
+ + + + + ++ + + F S IS
Sbjct: 114 IKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS 173
Query: 219 SKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFA 278
I + D + E T ++ + + A
Sbjct: 174 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEE--EIEEDLVA 231
Query: 279 SAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI 335
+ D +F+Y + + N AHK GV + W+ T L+++ D K W++
Sbjct: 232 TGSLDTNIFIYSVKRPMKIIKALN-AHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
Score = 65.4 bits (157), Expect = 1e-12
Identities = 38/301 (12%), Positives = 75/301 (24%), Gaps = 37/301 (12%)
Query: 130 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR 189
H+ + +P + SG G++ W + I + S +
Sbjct: 12 HNKGITALTVNP----LISGSYDGRIMEWS-------SSSMHQDHSNLIVSLDNSKAQEY 60
Query: 190 MVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG 249
+ + + + E G+ S + +
Sbjct: 61 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLI--------------- 105
Query: 250 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV 309
+ S S ++ A +G S VS +
Sbjct: 106 LQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKP 165
Query: 310 YAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLL---- 365
++ P T + L+D++++ + + +S
Sbjct: 166 SYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEI 225
Query: 366 ------TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW 419
T SL I V P I+ + H + L T+ + D I RW
Sbjct: 226 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-STLVSSGADACIKRW 284
Query: 420 N 420
N
Sbjct: 285 N 285
Score = 50.7 bits (119), Expect = 1e-07
Identities = 17/75 (22%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Query: 1 MGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRG 60
E + D + T SL I V P I+ + H + L
Sbjct: 212 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-S 270
Query: 61 TVFTGSHDGFITRWN 75
T+ + D I RWN
Sbjct: 271 TLVSSGADACIKRWN 285
Score = 47.6 bits (111), Expect = 1e-06
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 384 PIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
++ I GHNK ITAL ++P + +GS+DG I W++ +
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSS 40
Score = 33.8 bits (75), Expect = 0.032
Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 111 NSVIIRNIENPA-ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTV 161
++ I +++ P I H VN + + S ++ W+ V
Sbjct: 237 TNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNVV 287
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 83.4 bits (204), Expect = 1e-18
Identities = 52/304 (17%), Positives = 102/304 (33%), Gaps = 23/304 (7%)
Query: 38 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLG 97
I +K + L D + +G D I W+ T R G +
Sbjct: 6 QRIHCRSETSKGVYCL--QYDDQKIVSGLRDNTIKIWDKNT----LECKRILTGHTGSVL 59
Query: 98 GDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRI 157
+ + T + +R + + T V + + + + +
Sbjct: 60 CLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV 119
Query: 158 WDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISG 217
WD + I + D +V +R V+ + T V ++G
Sbjct: 120 WDMASPTDITLRRVLVGH---RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG 176
Query: 218 QSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF 277
+ I + R +++GS DNTI +++ + H V+ +R+
Sbjct: 177 HKRGIACLQY---RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK--RI 231
Query: 278 ASAGFDGKVFLYDGASADLVSELGNP-------AHKGGVYAVAWKPDGTQLLTASGDKTC 330
S +DGK+ ++D +A H G V+ + + D Q++++S D T
Sbjct: 232 VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTI 289
Query: 331 KLWD 334
+WD
Sbjct: 290 LIWD 293
Score = 74.1 bits (180), Expect = 2e-15
Identities = 43/301 (14%), Positives = 88/301 (29%), Gaps = 27/301 (8%)
Query: 128 TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDN 187
+E S V I SG ++IWD E H
Sbjct: 12 SETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGH------TGSVLCLQY 63
Query: 188 QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF 247
V++ + V+ TG + + + + F +
Sbjct: 64 DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMA 123
Query: 248 EGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKG 307
+ H V V + AS D + +++ ++ + V L
Sbjct: 124 SPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCEFVRTLNGHKR-- 179
Query: 308 GVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTV 367
+ +++ S D T +LWDIE + + ++ + +++
Sbjct: 180 --GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC---IRFDNKRIVSG 234
Query: 368 SLSGFISYLDVNN--------PSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW 419
+ G I D+ + +R + H+ + L + + + SHD I W
Sbjct: 235 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIW 292
Query: 420 N 420
+
Sbjct: 293 D 293
Score = 46.0 bits (107), Expect = 4e-06
Identities = 36/208 (17%), Positives = 79/208 (37%), Gaps = 12/208 (5%)
Query: 216 SGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGS 275
S SK + + + I++G DNTI +++ + K H+ V ++Y
Sbjct: 12 SETSKGVYCLQYDDQK---IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 68
Query: 276 HFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI 335
S+ +V+ + E+ N + + + ++T S D++ +WD+
Sbjct: 69 ITGSSDSTVRVWDVN------TGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 336 ETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPI 395
+ + ++ + + Y+++ S I + + +R + GH + I
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHKRGI 181
Query: 396 TALALSPDRGTVFTGSHDGFITRWNAKT 423
L V +GS D I W+ +
Sbjct: 182 ACLQYRDRL--VVSGSSDNTIRLWDIEC 207
Score = 41.8 bits (96), Expect = 8e-05
Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 12/155 (7%)
Query: 12 CLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFI 71
+ Y+++ S I + + +R + GH + I L V +GS D I
Sbjct: 144 VDFDDKYIVSASGDRTIKVWNTSTCE-FVRTLNGHKRGIACLQYRDRL--VVSGSSDNTI 200
Query: 72 TRWNAKT-------EYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAIS 124
W+ + E + + ++ G GK ++ ++ R
Sbjct: 201 RLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCL 260
Query: 125 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD 159
EHS V + F I S + IWD
Sbjct: 261 RTLVEHSGRVF--RLQFDEFQIVSSSHDDTILIWD 293
Score = 34.4 bits (77), Expect = 0.022
Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 383 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
I +K + L D + +G D I W+ T
Sbjct: 6 QRIHCRSETSKGVYCL--QYDDQKIVSGLRDNTIKIWDKNT 44
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 80.3 bits (196), Expect = 5e-17
Identities = 60/424 (14%), Positives = 119/424 (28%), Gaps = 93/424 (21%)
Query: 38 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLG 97
K H+ I +++ + S DG++ W+ K ++ G
Sbjct: 5 ATANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSG 62
Query: 98 GDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAV-NVAKYSPSGFYIASGDISGKVR 156
H + + + + +A+ SG +
Sbjct: 63 ------------------------------LHHVDVLQAIERDAFELCLVATTSFSGDLL 92
Query: 157 IWDTVNKEHILKNEFHPI--------GGPIKDIAWSPD-----NQRMVVVGE-------- 195
+ ++ K F + + W + R+V
Sbjct: 93 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWK 152
Query: 196 --------GRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAV- 246
E +V S+ S D I TG + T+ +
Sbjct: 153 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQIS 210
Query: 247 -----FEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFL------------- 288
F+ + + +S +++V++SP GS A A
Sbjct: 211 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG 270
Query: 289 -YDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLM- 346
+ + LG AH V ++++ G L +A D + WD++TK ++ M
Sbjct: 271 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH 330
Query: 347 GNQVEDQQVSCLW--QGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDR 404
+ +E ++ GD L + DV R G + + + DR
Sbjct: 331 CDDIEIEEDILAVDEHGDSLAEPGV------FDVKFLKKGWRSGMGADLNESLCCVCLDR 384
Query: 405 GTVF 408
+
Sbjct: 385 SIRW 388
Score = 52.9 bits (125), Expect = 3e-08
Identities = 13/129 (10%), Positives = 34/129 (26%), Gaps = 15/129 (11%)
Query: 304 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCL----- 358
AH +++V+ ++ SGD K+WD + + +
Sbjct: 12 AHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 359 -------WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGS 411
++ + T S SG + + + + + + +
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITR-EDETKKVIFEKLDLLDSDMKKHSFWALKWG 128
Query: 412 HDGFITRWN 420
+
Sbjct: 129 ASNDRLLSH 137
Score = 45.2 bits (105), Expect = 1e-05
Identities = 28/188 (14%), Positives = 51/188 (27%), Gaps = 25/188 (13%)
Query: 37 STPIRVIKGHNKPITALALSPDRGTVFTGSHDGFI-----------------TRWNAKTE 79
+ ++ T++ +S G + TG ++G + +
Sbjct: 174 QGTVESPMTPSQFATSVDISER-GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN 232
Query: 80 YIFATLPRTQRGQPIVLGGD-----PKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAV 134
I + Q + + + + S HS V
Sbjct: 233 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWV 292
Query: 135 NVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFH--PIGGPIKDIAWSPDNQRMVV 192
++ SG + S GK+R WD KE I H I +A +
Sbjct: 293 MSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE 352
Query: 193 VGEGRERF 200
G +F
Sbjct: 353 PGVFDVKF 360
Score = 37.5 bits (85), Expect = 0.002
Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 383 TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
K H+ I +++ + S DG++ W+ K
Sbjct: 5 ATANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKL 43
Score = 29.1 bits (63), Expect = 1.2
Identities = 11/52 (21%), Positives = 22/52 (42%)
Query: 34 NNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATL 85
+ S H+ + +L+ + T+ + DG + W+ KT+ TL
Sbjct: 276 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 327
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 79.1 bits (193), Expect = 8e-17
Identities = 39/325 (12%), Positives = 89/325 (27%), Gaps = 28/325 (8%)
Query: 40 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGGD 99
+++ + I+ + + P + + S DG +T + + L ++ R + +L +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 100 --PKGKNFLYTNGNSVIIR--------NIENPAISDIYTEHSCAVNVAKYSPSGFYIASG 149
+Y I + + ++
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123
Query: 150 DISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETG 209
R + N + + ++ +V + + ++ + + E
Sbjct: 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183
Query: 210 TSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAV---------------FEGPPFKF 254
E SG I P S D +AV F +
Sbjct: 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRL 243
Query: 255 KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW 314
+ + V ++ +SP +AG DG + ++ + + A V
Sbjct: 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF---AKFNEDSVVKI 300
Query: 315 KPDGTQLLTASGDKTCKLWDIETKS 339
L A+ D T K ++
Sbjct: 301 ACSDNILCLATSDDTFKTNAAIDQT 325
Score = 73.0 bits (177), Expect = 8e-15
Identities = 27/315 (8%), Positives = 77/315 (24%), Gaps = 26/315 (8%)
Query: 130 HSCAVNVAKYSPSGFYIASGDISGKVRIWDT-VNKEHILKNEFHPIGGPIKDIAWSPDNQ 188
++ K PS + G + ++ + +++ + P+ + +
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD 69
Query: 189 RMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFE 248
+ VG + S ++ + C ++I S D I V +
Sbjct: 70 LQIYVG-TVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVID 128
Query: 249 GPPFKFKMTKQEHSRFVQAVRYSPS------GSHFASAGFDGKVFLYDGASADLVSELGN 302
+ + ++ + S + +V + + +
Sbjct: 129 PRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIE 188
Query: 303 --PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQ------ 354
+ +S D + + + +
Sbjct: 189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDT 248
Query: 355 --------VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGT 406
+ + +L T G IS ++ I+ N + + ++
Sbjct: 249 NLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT-RKKIKNFAKFN-EDSVVKIACSDNI 306
Query: 407 VFTGSHDGFITRWNA 421
+ + D A
Sbjct: 307 LCLATSDDTFKTNAA 321
Score = 57.9 bits (138), Expect = 6e-10
Identities = 10/80 (12%), Positives = 29/80 (36%)
Query: 304 AHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDY 363
A K + + P + LL S D + ++ + ++ + L + + + C + +
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT 68
Query: 364 LLTVSLSGFISYLDVNNPST 383
L + + + +
Sbjct: 69 DLQIYVGTVQGEILKVDLIG 88
Score = 40.6 bits (93), Expect = 2e-04
Identities = 6/39 (15%), Positives = 17/39 (43%)
Query: 385 IRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
+++ + I+ + + P + + S DG +T +
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDI 42
Score = 31.0 bits (68), Expect = 0.25
Identities = 8/67 (11%), Positives = 19/67 (28%), Gaps = 2/67 (2%)
Query: 10 VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG 69
+ + +L T G IS ++ K + + ++ + + D
Sbjct: 257 IEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVV--KIACSDNILCLATSDD 314
Query: 70 FITRWNA 76
A
Sbjct: 315 TFKTNAA 321
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 77.1 bits (188), Expect = 3e-16
Identities = 32/345 (9%), Positives = 76/345 (22%), Gaps = 33/345 (9%)
Query: 16 GDYLLTVSLSGFISYLDVNNPSTPIRVIK-GHNKPITALALSPDRGTVF-TGSHDGFITR 73
+Y++ + + +DV + T + ++PD T + +H G I
Sbjct: 8 HEYMIVTNYPNNLHVVDVAS-DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 74 WNAKTEYIFATLPRTQ-----RGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIY- 127
+ T + P GK T + + + +
Sbjct: 67 IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV 126
Query: 128 ----TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAW 183
P Y+ G + + + +
Sbjct: 127 FSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDV---------------K 171
Query: 184 SPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNT 243
+ + + + + + + T
Sbjct: 172 TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 231
Query: 244 IAVFEGPPFKFKM-TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN 302
+ K + + SP + ++ YD L+
Sbjct: 232 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN- 289
Query: 303 PAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMG 347
Y VA+ G +L +++ +T V +
Sbjct: 290 --LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 332
Score = 43.2 bits (100), Expect = 3e-05
Identities = 12/116 (10%), Positives = 33/116 (28%), Gaps = 6/116 (5%)
Query: 312 VAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLL-TVSLS 370
A K ++ + + D+ + + +M ++ +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 371 GFISYLDVNNPSTPIRVIKG-----HNKPITALALSPDRGTVFTGSHDGFITRWNA 421
G I +D++ + + + A+SPD V+ + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 117
Score = 26.6 bits (57), Expect = 5.4
Identities = 2/26 (7%), Positives = 8/26 (30%)
Query: 398 LALSPDRGTVFTGSHDGFITRWNAKT 423
AL + ++ + + +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVAS 27
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 73.7 bits (179), Expect = 4e-15
Identities = 27/314 (8%), Positives = 69/314 (21%), Gaps = 25/314 (7%)
Query: 45 GHNKPITALALSPDRGTVFTGSHDG--FITRWNAKTEYIFATLPRTQRGQPIVLGGDPKG 102
I + D F F+ ++ +T + + + K
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99
Query: 103 KNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASG------DISGKVR 156
+ + + + + S F ++
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159
Query: 157 IWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGR-----ERFGHVFMSETGTS 211
+ E A+ D++ + + +R F E +
Sbjct: 160 AIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSK 219
Query: 212 VGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGP------PFKFKMTKQEHSRFV 265
I N P + N + P ++ + +
Sbjct: 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279
Query: 266 QAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS 325
+ +++ A G + YD + + K + + D ++
Sbjct: 280 SVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT------EVKNNLTDLRLSADRKTVMVRK 333
Query: 326 GDKTCKLWDIETKS 339
D + +E
Sbjct: 334 DDGKIYTFPLEKPE 347
Score = 69.9 bits (169), Expect = 9e-14
Identities = 32/338 (9%), Positives = 67/338 (19%), Gaps = 23/338 (6%)
Query: 102 GKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIA--SGDISGKVRIWD 159
G + + I+++ + + + + + I+D
Sbjct: 15 GDLIAFVSRGQAFIQDVSGTYV--LKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD 72
Query: 160 TVNKEHILKNEFHPI---GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS 216
+ E G ++ ++ + G + E
Sbjct: 73 YRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 132
Query: 217 GQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSH 276
+ T + + A + +
Sbjct: 133 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKN 192
Query: 277 FASAGFDGKVFLYDGASADLVSELGN-----PAHKGGVYAVAWKPDGTQLLTASGDKTCK 331
+ D + E+ + P G P D
Sbjct: 193 LYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDM 252
Query: 332 LWDIETKSAVSEFLMGNQVEDQQVSCLWQ------GDYLLTVSLSGFISYLDVNNPSTPI 385
+ + + Y G + DV
Sbjct: 253 YKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT----- 307
Query: 386 RVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
R + +T L LS DR TV DG I + +
Sbjct: 308 RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345
Score = 56.4 bits (134), Expect = 2e-09
Identities = 19/304 (6%), Positives = 50/304 (16%), Gaps = 24/304 (7%)
Query: 16 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 75
+ + + + + A+ + + + I +
Sbjct: 54 TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVD 113
Query: 76 AKTEYIFATL---------PRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDI 126
+T + G P I
Sbjct: 114 LETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA 173
Query: 127 YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG-----GPIKDI 181
T + + + D V + P G
Sbjct: 174 ATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPT 233
Query: 182 AWSPDNQRMVVV-----GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRII 236
P + + + + +
Sbjct: 234 KLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA-AYYQ 292
Query: 237 TGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADL 296
E + ++ E + +R S DGK++ + +
Sbjct: 293 GAPEKGVLLKYDVK----TRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPED 348
Query: 297 VSEL 300
+
Sbjct: 349 ERTV 352
Score = 49.5 bits (116), Expect = 3e-07
Identities = 15/100 (15%), Positives = 25/100 (25%), Gaps = 8/100 (8%)
Query: 267 AVRYSPS-GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTAS 325
A +SP G A G+ F+ D + ++ + V D
Sbjct: 7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV----PEPLRIRYVRRGGDTKVAFIHG 61
Query: 326 GD--KTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDY 363
++D T A V V +
Sbjct: 62 TREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAV 101
Score = 31.8 bits (70), Expect = 0.17
Identities = 9/113 (7%), Positives = 29/113 (25%), Gaps = 5/113 (4%)
Query: 309 VYAVAWKP-DGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTV 367
+A + P DG + S + + D+ + + + + V
Sbjct: 5 KFAEDFSPLDGDLIAFVSRGQA-FIQDVSGTYVLK---VPEPLRIRYVRRGGDTKVAFIH 60
Query: 368 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWN 420
+ + + + + A+ + + + I +
Sbjct: 61 GTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVD 113
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 72.9 bits (177), Expect = 8e-15
Identities = 32/347 (9%), Positives = 77/347 (22%), Gaps = 50/347 (14%)
Query: 17 DYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKP--ITALALSPDRGTVF-TGSHDGFITR 73
DY+L + + +D +VI + ++P + T + + +
Sbjct: 2 DYILAPARPDKLVVIDTEK-MAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 74 WNAKTEYIFATL----PRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDI--- 126
+ T + P + P GK + + +
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 127 ---------YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGP 177
E + + ++ G + V + PI
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVE-----DKPIQSW 175
Query: 178 IKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIIT 237
+ PD + E F +
Sbjct: 176 EAETYAQPDVLAVWNQHESSGVMATPFYT---------------------ARKDIDPADP 214
Query: 238 GSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLV 297
+ + + + M + + + + + G + +D +
Sbjct: 215 TAYRTGLLTMDLETGEMAMREVRIMDVFY-FSTAVNPAKTRAFGAYNVLESFDLEKNASI 273
Query: 298 SELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEF 344
+ Y+V DG+ + +D ET +
Sbjct: 274 KRVP---LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQV 317
Score = 68.3 bits (165), Expect = 2e-13
Identities = 35/329 (10%), Positives = 91/329 (27%), Gaps = 27/329 (8%)
Query: 103 KNFLYTNG--NSVIIRNIENPAISDIYT--EHSCAVNVAKYSPSGFYI-ASGDISGKVRI 157
++++ + +++ + E A+ + T + V +P G A+ + S +
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 158 WDTVNKEHILKNEFHP---IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGE 214
D V E + + + + A SPD + + + F +
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 215 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG 274
+ + + R ++ + D + G + + ++ +
Sbjct: 121 DAETLSRRKAFEAP--RQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAE 178
Query: 275 SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD 334
++ + + D + D
Sbjct: 179 TYAQPDVLAVWNQ-------------HESSGVMATPFYTARKDIDPADPTAYRTGLLTMD 225
Query: 335 IETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKP 394
+ET + V + + D+ ++ RV
Sbjct: 226 LETGEMAMREVRIMDVFYFSTAVNPAKTRA--FGAYNVLESFDLEKNASIKRV--PLPHS 281
Query: 395 ITALALSPDRGTVFTGSHDGFITRWNAKT 423
++ +S D TV+ G G + ++A+T
Sbjct: 282 YYSVNVSTDGSTVWLGGALGDLAAYDAET 310
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 71.7 bits (174), Expect = 2e-14
Identities = 47/396 (11%), Positives = 94/396 (23%), Gaps = 83/396 (20%)
Query: 47 NKPITALALSPDRGTVF-----TGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGGDPK 101
++P A +PD V+ + + + + + P+V
Sbjct: 1 DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVV---ADD 57
Query: 102 GKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTV 161
G F+ IA G+ + V ++D V
Sbjct: 58 GS-FIAHAST------------------------------VFSRIARGERTDYVEVFDPV 86
Query: 162 NKEHILKNEFH-----PIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEIS 216
E +G + +PD + ++ V E +
Sbjct: 87 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD 146
Query: 217 GQSKPINSCD-------FKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVR 269
+ + T + F E +
Sbjct: 147 VPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF-----HPEDEFLINHPA 201
Query: 270 YSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKT 329
YS + GK+ D +S D A A W+P G Q +
Sbjct: 202 YSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD 261
Query: 330 CKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIK 389
+ Q D + S F+ LD + +
Sbjct: 262 RIYLL-----------------------VDQRDEWRHKTASRFVVVLDAKTG-ERLAKFE 297
Query: 390 GHNKPITALALSPDRGTVF--TGSHDGFITRWNAKT 423
++ ++ +S D + + D + +A++
Sbjct: 298 MGHEI-DSINVSQDEKPLLYALSTGDKTLYIHDAES 332
Score = 59.0 bits (141), Expect = 3e-10
Identities = 39/344 (11%), Positives = 89/344 (25%), Gaps = 51/344 (14%)
Query: 23 SLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT----------GSHDGFIT 72
+ +D I +I G P ++ D + G ++
Sbjct: 25 AAVTQQFVIDGEA-GRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVE 81
Query: 73 RWNAKTEYIFATLPRTQR------GQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDI 126
++ T A + P + P GK L+ + + +
Sbjct: 82 VFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 141
Query: 127 --YTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG--GPIKDIA 182
+ ++ +P F++ D S + T I E I A
Sbjct: 142 KRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA 201
Query: 183 WSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN 242
+S R+V + S + + ++ + ++P + +
Sbjct: 202 YSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW-QQVAYHRAL 260
Query: 243 TIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGN 302
+ V + D + + +++
Sbjct: 261 DRIYL----------------------LVDQRDEWRHKTASRFVVVLDAKTGERLAKF-- 296
Query: 303 PAHKGGVYAVAWKPDGTQLL--TASGDKTCKLWDIETKSAVSEF 344
+ ++ D LL ++GDKT + D E+ +
Sbjct: 297 -EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSV 339
Score = 44.0 bits (102), Expect = 2e-05
Identities = 20/176 (11%), Positives = 43/176 (24%), Gaps = 23/176 (13%)
Query: 45 GHNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGGDPKGKN 104
I A S G + ++ G I + + + + G G
Sbjct: 192 EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 251
Query: 105 FLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKE 164
H + S V + D E
Sbjct: 252 QQVAY--------------------HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE 291
Query: 165 HILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSK 220
+ +G I I S D + ++ ++ ++ +E+G + ++
Sbjct: 292 RL---AKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGH 344
Score = 39.4 bits (90), Expect = 6e-04
Identities = 32/292 (10%), Positives = 77/292 (26%), Gaps = 33/292 (11%)
Query: 14 WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITA-------LALSPDRGTVFTGS 66
+ + ++ D P I+ + P +L+PD T+
Sbjct: 66 TVFSRIARGERTDYVEVFDPVT-LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQ 124
Query: 67 HDGFITRWNAKTEYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDI 126
E + P +G+ +
Sbjct: 125 FSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEIT 184
Query: 127 YTEHSCAVN---------------VAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEF 171
+TE + + + +G SG + V +
Sbjct: 185 HTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD 244
Query: 172 HPIGGPIKDIAWSPDNQRMVVVGEGRERFGH--------VFMSETGTSVGEISGQSKPIN 223
G + +A+ R+ ++ + R+ + H V ++TG + + I+
Sbjct: 245 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEID 303
Query: 224 SCDFKP-SRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG 274
S + +P + D T+ + + + + + Q + + G
Sbjct: 304 SINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 70.6 bits (172), Expect = 7e-14
Identities = 43/348 (12%), Positives = 97/348 (27%), Gaps = 38/348 (10%)
Query: 18 YLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK 77
+ +T+ +G I+ +D + V+ LS +F DG + +
Sbjct: 34 FSVTLRDAGQIALIDGST-YEIKTVLDTGYAV-HISRLSASGRYLFVIGRDGKVNMIDLW 91
Query: 78 TE--YIFATLPRTQRGQPIV--LGGDPKGKNFLYTN--GNSVIIRNIENPAISDIYTEHS 131
+ A + + I + K + +I + E I +
Sbjct: 92 MKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG 151
Query: 132 CAVNVAKYSPSGFYIA------------SGDISGKVRIWDTVNKEHILKNEFHPIGGPIK 179
+ +Y P A + +GK+ + D + + LK +
Sbjct: 152 MTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN-LKTTEISAERFLH 210
Query: 180 DIAWSPDNQRMVVVGEGRERFGH----VFMSETGTSVGEISGQSKPINSCDFKPSRPFRI 235
D ++ + R + G + + P
Sbjct: 211 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWA 270
Query: 236 ITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASAD 295
+ D+++A+ P +++ + + G +LY A+ +
Sbjct: 271 TSHMGDDSVALIGTDPEGHP----DNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLN 326
Query: 296 LVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSE 343
+E+ +VA D + D K I + ++E
Sbjct: 327 PEAEISG--------SVAV-FDIKAMTGDGSDPEFKTLPIAEWAGITE 365
Score = 54.8 bits (131), Expect = 9e-09
Identities = 28/204 (13%), Positives = 56/204 (27%), Gaps = 16/204 (7%)
Query: 235 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASA 294
+T + IA+ +G ++ K V R S SG + G DGKV + D
Sbjct: 35 SVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDLWMK 93
Query: 295 DLVSELGNPA---HKGGVYAVAWKPDGTQLL-TASGDKTCKLWDIETKSAVSEFLMGN-- 348
+ + + + + + A + D ET
Sbjct: 94 EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT 153
Query: 349 ------QVEDQQVSCLWQGD---YLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALA 399
E + + L +++ V +G I +D + + + +
Sbjct: 154 YDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG 213
Query: 400 LSPDRGTVFTGSHDGFITRWNAKT 423
L T ++
Sbjct: 214 LDGSHRYFITAANARNKLVVIDTK 237
Score = 47.9 bits (113), Expect = 1e-06
Identities = 38/299 (12%), Positives = 72/299 (24%), Gaps = 53/299 (17%)
Query: 133 AVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVV 192
AV++++ S SG Y+ GKV + D KE E IG + I S
Sbjct: 63 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI-KIGSEARSIETSK------- 114
Query: 193 VGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPF 252
+ I + +G
Sbjct: 115 ---------------------------------MEGWEDKYAIAGAYWPPQYVIMDGETL 141
Query: 253 KFKMTKQEHSRFVQAVRYSPSGSHFA-SAGFDGKVFLYDGASADLVSELG---------- 301
+ K + Y P A A F+ + + +
Sbjct: 142 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTT 201
Query: 302 NPAHKGGVYAVAWKPDGTQLLTASG-DKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQ 360
+ + ++ +TA+ + D + V+ G Q +
Sbjct: 202 EISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFV 261
Query: 361 GDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRW 419
V + + V T + I + G++F +H +
Sbjct: 262 HPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLY 320
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 61.4 bits (147), Expect = 5e-11
Identities = 52/362 (14%), Positives = 113/362 (31%), Gaps = 35/362 (9%)
Query: 6 EDQQVSCL-WQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFT 64
++CL ++ +Y++T + I D N + + GH+ + AL + G + +
Sbjct: 12 MTSVITCLQFEDNYVITGADDKMIRVYDSIN-KKFLLQLSGHDGGVWALKYAHG-GILVS 69
Query: 65 GSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAIS 124
GS D + W+ K + + K ++ T + +
Sbjct: 70 GSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH------VW 123
Query: 125 DIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWS 184
+ E S V + Y + + V + H+ G I
Sbjct: 124 KLPKESS----VPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY 179
Query: 185 PDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTI 244
+ + V + + + R I+ S D TI
Sbjct: 180 DNTLIVWDVAQMKCLYILSGH--------------TDRIYSTIYDHERKRCISASMDTTI 225
Query: 245 AVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPA 304
+++ + T Q H+ V +R S A+A + + + S
Sbjct: 226 RIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRK------FSY 279
Query: 305 HKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYL 364
H + A+ +L + + ++++ + V ++ + DQ S ++G L
Sbjct: 280 HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDA--DQIWSVNFKGKTL 337
Query: 365 LT 366
+
Sbjct: 338 VA 339
Score = 54.9 bits (130), Expect = 6e-09
Identities = 37/307 (12%), Positives = 86/307 (28%), Gaps = 18/307 (5%)
Query: 130 HSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQR 189
H +V Y+ +G +R++D++NK+ +L+ H G + + ++
Sbjct: 11 HMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGH--DGGVWALKYAHGGI- 66
Query: 190 MVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG 249
+V G + + + S + I+TGS DNT+ V++
Sbjct: 67 -LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125
Query: 250 PPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGV 309
P E + +F + + + G+ + V
Sbjct: 126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIV 185
Query: 310 YAVAWKPDGTQLLTASGDK------------TCKLWDIETKSAVSEFLMGNQVEDQQVSC 357
+ VA L + D + E +
Sbjct: 186 WDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 245
Query: 358 LWQGDYLLTVSLSGF-ISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFI 416
+ +S + + + R H+ ++A+ + +
Sbjct: 246 VGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQF 305
Query: 417 TRWNAKT 423
+N ++
Sbjct: 306 NIYNLRS 312
Score = 54.1 bits (128), Expect = 1e-08
Identities = 26/152 (17%), Positives = 54/152 (35%), Gaps = 3/152 (1%)
Query: 215 ISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSG 274
+ G + +C + +ITG++D I V++ KF + H V A++Y+ G
Sbjct: 8 LRGHMTSVITC-LQFE-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-G 64
Query: 275 SHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWD 334
S D V ++D + + ++T S D T +W
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 335 IETKSAVSEFLMGNQVEDQQVSCLWQGDYLLT 366
+ +S+V + + + ++
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 156
Score = 38.0 bits (86), Expect = 0.001
Identities = 7/65 (10%), Positives = 17/65 (26%), Gaps = 1/65 (1%)
Query: 10 VSCLWQGDYLLTVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDG 69
++ + D +L + ++ + I I ++ V DG
Sbjct: 287 ITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDG 345
Query: 70 FITRW 74
Sbjct: 346 QSFLE 350
Score = 27.2 bits (58), Expect = 4.3
Identities = 5/50 (10%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Query: 111 NSVIIRNIENPA-ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWD 159
N I N+ + + + + + + +A+ + G+ +
Sbjct: 303 NQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL-VAAVEKDGQSFLEI 351
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 60.4 bits (145), Expect = 1e-10
Identities = 24/331 (7%), Positives = 71/331 (21%), Gaps = 50/331 (15%)
Query: 38 TPIRVIKGHNKPITALALSPDRGT----------VFTGSHDGFITRWNAKTEYIFATLP- 86
+ G G ++ ++ T A +
Sbjct: 57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIEL 114
Query: 87 -----RTQRGQPIVLGGDPKGKNFLYTNG--NSVIIRNIENPAISDIYTEHSCAVNVAKY 139
+ + ++G L+ ++ ++ + + SC +
Sbjct: 115 PDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH-IHPG 173
Query: 140 SPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRER 199
+ + Y+ S S + A + M+V
Sbjct: 174 AAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSI 233
Query: 200 FGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ 259
+ T I G + +F+ + +++ ++ +
Sbjct: 234 LQGDIPAAGATMKAAIDGNESGRKADNFRSAGF-QMVAKLKNTDGIMI------------ 280
Query: 260 EHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGT 319
+ + + + A+ DG
Sbjct: 281 -----------LTVEHSRSCLAAAENTSSVTASVGQTSGPIS---NGHDSDAIIAAQDGA 326
Query: 320 QLL--TASGDKTCKLWDIETKSAVSEFLMGN 348
++G + ++D + S +
Sbjct: 327 SDNYANSAGTEVLDIYDAASDQDQSSVELDK 357
Score = 39.2 bits (90), Expect = 8e-04
Identities = 12/191 (6%), Positives = 33/191 (17%), Gaps = 18/191 (9%)
Query: 46 HNKPITALALSPDRGTVFTGSHDGFITRWNAKTEYIFATLPRTQRGQP----IVLGGDPK 101
T S + + A +Q Q +++
Sbjct: 172 PGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVAS 231
Query: 102 GKNFLYTNGNSVIIRNIENPAISDIYTE--HSCAVNVAKYSPSGFYI---------ASGD 150
++ + S + S + + I +
Sbjct: 232 SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291
Query: 151 ISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGT 210
+ + G I + D ++ + +
Sbjct: 292 AAENTSSVTASVGQTSGPI---SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348
Query: 211 SVGEISGQSKP 221
+ P
Sbjct: 349 DQSSVELDKGP 359
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 57.3 bits (137), Expect = 1e-09
Identities = 32/297 (10%), Positives = 64/297 (21%), Gaps = 32/297 (10%)
Query: 136 VAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIG-GPIKDIAWSPDNQRMVVVG 194
+ + G + V I D +H + + + + +
Sbjct: 31 SVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLY 90
Query: 195 EGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDN-TIAVFE---GP 250
S +S P+ R E + V G
Sbjct: 91 VANITPAASVTVIDAVSKKMLSEIDTA-ACVLAYPAGDDRFTALCESGKALTVTLDANGK 149
Query: 251 PFKFKMTKQEHSRFVQAVRYSPS--GSHFASAGFDGKVFLYDGASADLVSELGNPAHKGG 308
K M+ + S + + G V D +
Sbjct: 150 EAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDA 209
Query: 309 VYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVS 368
A W+P G Q + + + S G +
Sbjct: 210 ERAEGWRPGGMQQTAVQAKQNRYYVLMHKGTDGSHKDPG-------------TQVWVYDL 256
Query: 369 LSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF--TGSHDGFITRWNAKT 423
S +P+ ++ +S D +F + + +A+T
Sbjct: 257 KSKQRVARWDLAQQKV--------EPLVSIQVSEDDKPLFYGLTATSDLVV-MDART 304
Score = 56.2 bits (134), Expect = 2e-09
Identities = 24/253 (9%), Positives = 50/253 (19%), Gaps = 52/253 (20%)
Query: 175 GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFR 234
GG A +PD + VV R
Sbjct: 16 GGFGPGFAIAPDRKASVVATTY-----------------------------------FSR 40
Query: 235 IITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGK-VFLYDGAS 293
G+ + + + + + + + DGK +++ +
Sbjct: 41 GSHGTRTDVVEIIDNTTLDHAGEIVIPA----KHAQHVPSPYNTAFSADGKRLYVANITP 96
Query: 294 ADLVSELGNPAHKG-----GVYAVAWKPDGTQLL-TASGD-KTCKLWDIETKSAVSEFLM 346
A V+ + + K V P G K + +
Sbjct: 97 AASVTVIDAVSKKMLSEIDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMS 156
Query: 347 GNQVEDQQVSCLWQGD----YLLTVSLSGFISYLDVNNPS-TPIRVIKGHNKPITALALS 401
++ + L + G + D + + A
Sbjct: 157 DAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWR 216
Query: 402 PDRGTVFTGSHDG 414
P
Sbjct: 217 PGGMQQTAVQAKQ 229
Score = 40.4 bits (93), Expect = 3e-04
Identities = 17/190 (8%), Positives = 39/190 (20%), Gaps = 24/190 (12%)
Query: 31 LDVNNPSTPIRVIKGHNKPITALALSPDR--GTVFTGSHDGFITRWNAKTEYIFATLPRT 88
+ + ++ R G ++ G + + + P +
Sbjct: 145 DANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWS 204
Query: 89 -QRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIA 147
G P G Y + + P
Sbjct: 205 LLTDAERAEGWRPGGMQQTAVQAKQNR-----------YYVLMHKGTDGSHKDPGTQVWV 253
Query: 148 SGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSE 207
S + + ++ + P+ I S D++ + V +
Sbjct: 254 YDLKSKQRVARWDLAQQKV---------EPLVSIQVSEDDKPLFYGLTATSDL-VVMDAR 303
Query: 208 TGTSVGEISG 217
TG
Sbjct: 304 TGALQHVEKQ 313
Score = 28.4 bits (62), Expect = 1.6
Identities = 14/151 (9%), Positives = 25/151 (16%), Gaps = 23/151 (15%)
Query: 19 LLTVSLSGFISYLDVNNPS-TPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAK 77
L + G + D + + A P
Sbjct: 178 YLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQ-------- 229
Query: 78 TEYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVA 137
+ + + G G + R + S V
Sbjct: 230 -NRYYVLMHKGTDGSHKDPGTQV---WVYDLKSKQRVARWDLAQQK--VEPLVSIQV--- 280
Query: 138 KYSPSG--FYIASGDISGKVRIWDTVNKEHI 166
S + S V + D
Sbjct: 281 --SEDDKPLFYGLTATSDLV-VMDARTGALQ 308
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 51.4 bits (121), Expect = 8e-08
Identities = 41/282 (14%), Positives = 92/282 (32%), Gaps = 8/282 (2%)
Query: 21 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKTE 79
S S IS +DV + I + P +SPD V+ +H ++ + T
Sbjct: 7 ANSESDNISVIDVTSN-KVTATIPVGSNP-MGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 80 YIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKY 139
+ AT+P Q + + D K +++ + + + ++ + +A
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALS 124
Query: 140 SPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRER 199
+ + V + +TV K I K IA +PD ++ V
Sbjct: 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG---RSPKGIAVTPDGTKVYVANFDSMS 181
Query: 200 FGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQ 259
+ + + + + ++ + NT+++ + K
Sbjct: 182 ISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241
Query: 260 EHSRFVQAVRYSPSGSH-FASAGFDGKVFLYDGASADLVSEL 300
+ +P G + + F V + D A+ + + +
Sbjct: 242 VGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
Score = 50.3 bits (118), Expect = 2e-07
Identities = 36/281 (12%), Positives = 81/281 (28%), Gaps = 12/281 (4%)
Query: 145 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVF 204
YIA+ + S + + D + + P+G SPD ++ V V
Sbjct: 5 YIANSE-SDNISVIDVTSNKVTAT---IPVGSNPMGAVISPDGTKVYVANAHS---NDVS 57
Query: 205 MSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRF 264
+ +T T+ + + ++ + ++ + +
Sbjct: 58 IIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS 117
Query: 265 VQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA 324
+ SP G K + + + +A PDGT++ A
Sbjct: 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTK--AVINTVSVGRSPKGIAVTPDGTKVYVA 175
Query: 325 SGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPS-T 383
+ D ++V + + +T F + ++ +
Sbjct: 176 NFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235
Query: 384 PIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKT 423
I P +A++PD V+ S ++ + T
Sbjct: 236 ITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTAT 275
Score = 44.5 bits (103), Expect = 1e-05
Identities = 34/287 (11%), Positives = 80/287 (27%), Gaps = 7/287 (2%)
Query: 64 TGSHDGFITRWNAKTEYIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAI 123
S I+ + + + AT+P V+ P G N +S + I + A
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNPMGAVI--SPDGTKVYVANAHSNDVSII-DTAT 63
Query: 124 SDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAW 183
+++ + + S + ++ G +A
Sbjct: 64 NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLAL 123
Query: 184 SPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNT 243
SPD +++ V G + + G+S + ++ + S +
Sbjct: 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSIS 183
Query: 244 IAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNP 303
+ + + + + V + D + + + +
Sbjct: 184 VIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI--- 240
Query: 304 AHKGGVYAVAWKPDGTQLL-TASGDKTCKLWDIETKSAVSEFLMGNQ 349
+A PDG ++ S T + D T + + +G
Sbjct: 241 PVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKN 287
>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 381
Score = 48.0 bits (114), Expect = 1e-06
Identities = 21/160 (13%), Positives = 41/160 (25%), Gaps = 5/160 (3%)
Query: 239 SEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF-ASAGFDGKVFLYDGASADLV 297
S N + + T + V ++ + S + L ++ L
Sbjct: 102 STRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLA 161
Query: 298 SELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSC 357
+ + AV K Q + K ++ S + E E +S
Sbjct: 162 QNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELP---VEEYSPLSV 218
Query: 358 LWQGDYLLTVSLSGFISYLDVNNP-STPIRVIKGHNKPIT 396
IS D + +IK + +
Sbjct: 219 TILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDGSAS 258
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 44.1 bits (102), Expect = 2e-05
Identities = 33/293 (11%), Positives = 85/293 (29%), Gaps = 28/293 (9%)
Query: 31 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKTEYIFATLPRTQ 89
L+ T +V+ + + +SPD+ ++ + + + + T
Sbjct: 21 LNHEGALTLTQVVDVPGQV-QPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES 79
Query: 90 R--GQPIVLGGDPKGKNFLYTNGN-----SVIIRNIENPAISDIYTEHSCAVNVAKYSPS 142
G + D +G+ + N + + + D+ + +
Sbjct: 80 ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDN 139
Query: 143 GFYIASGDISGKVRIWDTVNKEHILKNEFHPI----GGPIKDIAWSPDNQRMV------- 191
++ ++ + H++ + + G + + + P+ Q
Sbjct: 140 RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 199
Query: 192 --VVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEG 249
V E ++ G++ +T + E ++ P + I VF
Sbjct: 200 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSV 259
Query: 250 PPFKFKMTKQEHS---RFVQAVRYSPSGSHFASAGFDG---KVFLYDGASADL 296
++K+ + SG + +AG V+ G L
Sbjct: 260 SEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 312
Score = 36.7 bits (83), Expect = 0.004
Identities = 7/77 (9%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Query: 277 FASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTA-SGDKTCKLWDI 335
+ ++ ++ +++ ++ G V + PD L + + I
Sbjct: 7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 66
Query: 336 ETKSAVSEFLMGNQVED 352
F + +
Sbjct: 67 APDDGALTFAAESALPG 83
Score = 35.2 bits (79), Expect = 0.013
Identities = 11/52 (21%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 145 YIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG 196
YIAS + S ++ +W+ ++ + + + G ++ + SPD + + V
Sbjct: 7 YIASPE-SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP 57
Score = 27.9 bits (60), Expect = 2.7
Identities = 6/49 (12%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 376 LDVNNPSTPIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITRWNAKT 423
L+ T +V+ + + +SPD+ ++ + + +
Sbjct: 21 LNHEGALTLTQVVDVPGQV-QPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 42.6 bits (99), Expect = 6e-05
Identities = 37/344 (10%), Positives = 89/344 (25%), Gaps = 36/344 (10%)
Query: 93 PIVLGGDPKGKNFLY---TNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASG 149
P D N + + + + ++ I + AV++++ S SG Y+
Sbjct: 21 PKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVI 79
Query: 150 DISGKVRIWDTVNKEHILKNEFHPIGGP---IKDIAWSPDNQRMVVVGEGRERFGHVFMS 206
++ + D KE E +++ + +F +
Sbjct: 80 GRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG- 138
Query: 207 ETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQ 266
ET +S + +++ + P I S ++ + +
Sbjct: 139 ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL 198
Query: 267 AVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASG 326
V + A G+D + A+ + + + A
Sbjct: 199 TVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA--------------- 243
Query: 327 DKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSLSGFISYLDVNNPSTPIR 386
+ + F+ S L G ++SL G +
Sbjct: 244 --LVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDG----SISLIGTDPKNHPQYAWKKVA 297
Query: 387 VIKGHNKPITALALSPDRGTVF-------TGSHDGFITRWNAKT 423
++G + P ++ + ++ K
Sbjct: 298 ELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 341
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 38.0 bits (88), Expect = 0.002
Identities = 40/298 (13%), Positives = 81/298 (27%), Gaps = 44/298 (14%)
Query: 147 ASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFG----H 202
SG G+VR+ V L P+ W N+ ++G ++ H
Sbjct: 15 WSGGHQGEVRVLG-VPSMRELMR--IPVFNVDSATGWGITNESKEILGGDQQYLNGDCHH 71
Query: 203 VFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKF-KMTKQEH 261
+S T D + + I + +A K K+T +
Sbjct: 72 PHISMT-----------------DGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPN 114
Query: 262 SRFVQAVRYSP---------SGSHFASAGFDGKVFLYDGA-------SADLVSELGNPAH 305
+ + +R + DG F D + A+ +
Sbjct: 115 VQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIV 174
Query: 306 KGGVYAVAWKPDGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLL 365
G + G + + + T ++++ VE + + + G++
Sbjct: 175 DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVE-RIAAAVKAGNF-K 232
Query: 366 TVSLSGFISYLDVNNPSTPIRVIKGHNKPITALALSPDRGTVFTGSHDGFITRWNAKT 423
T+ S +D S R I P + + G ++
Sbjct: 233 TIGDSKVPV-VDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDK 289
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 32.4 bits (72), Expect = 0.082
Identities = 26/259 (10%), Positives = 69/259 (26%), Gaps = 19/259 (7%)
Query: 99 DPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW 158
D G ++ + + ++++ + I + +N A++ P G IA + G
Sbjct: 9 DIHGDRIIFVCCDDLWEHDLKSGSTRKI-VSNLGVINNARFFPDGRKIAIRVMRGSSLNT 67
Query: 159 DTVNKEHILKNEFHPI----------GGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSET 208
+ + E I + PD ++ + +
Sbjct: 68 ADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRV 127
Query: 209 GTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAV 268
+ + I + + + K+ + +S + +
Sbjct: 128 ENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI 187
Query: 269 RYSPSGSHFASAGFDGKVFLYDGASADLV-------SELGNPAHKGGVYAVAWKPDGTQL 321
+ F+ D + +L Y DG ++
Sbjct: 188 VDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRI 247
Query: 322 LTASGDKTCKLWDIETKSA 340
L + G +++ +T+
Sbjct: 248 LFSKGGSI-YIFNPDTEKI 265
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 32.4 bits (72), Expect = 0.12
Identities = 32/196 (16%), Positives = 65/196 (33%), Gaps = 27/196 (13%)
Query: 137 AKYSPSGFYIASGDISGKVRIWD--TVNKEHILKNE-FHPIGGPIKDIAWSPDNQRMVVV 193
++ Y+ + + +++ N L+N F G I D + SPD Q +++
Sbjct: 22 LRWISDHEYLYKQE--NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLE 79
Query: 194 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK 253
+++ H + + + D R +NT V P
Sbjct: 80 YNYVKQWRHSYTAS--------------YDIYDLN-KRQLITEERIPNNTQWVTWSPVGH 124
Query: 254 FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVA 313
+ +V+ P+ + + +Y+G + + E A+
Sbjct: 125 KLAYVWNNDIYVKIE---PNLPSYRITWTGKEDIIYNGITDWVYEE----EVFSAYSALW 177
Query: 314 WKPDGTQLLTASGDKT 329
W P+GT L A + T
Sbjct: 178 WSPNGTFLAYAQFNDT 193
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 31.0 bits (68), Expect = 0.21
Identities = 19/214 (8%), Positives = 46/214 (21%), Gaps = 3/214 (1%)
Query: 128 TEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDN 187
+ +SP G +A + + A+SPD
Sbjct: 35 HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDG 94
Query: 188 QRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVF 247
++ M + +++ + P T + V+
Sbjct: 95 SKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY 154
Query: 248 EGPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKG 307
+ + S F + + +
Sbjct: 155 KVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF 214
Query: 308 GVYAVAWKPDGTQLLTAS---GDKTCKLWDIETK 338
+ P+GT ++ +S L + +
Sbjct: 215 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 248
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 31.2 bits (69), Expect = 0.24
Identities = 29/238 (12%), Positives = 62/238 (26%), Gaps = 17/238 (7%)
Query: 99 DPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIW 158
D +G F + G + +S + V + SP+ VR +
Sbjct: 50 DKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKF 108
Query: 159 DTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQ 218
+H G + + ++ G G +
Sbjct: 109 GATILQHPRGVTVDNKG--RIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVND 166
Query: 219 SKPINSCDFKPSRPFRII-TGSEDNTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPSGSHF 277
+ I D + G I + + + + A ++
Sbjct: 167 KQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHN------ 220
Query: 278 ASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKPDGTQLLTASGDKTCKLWDI 335
+ + ++ L+S L + + VA DG ++ AS D ++
Sbjct: 221 -----NFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDG-SVVLASKDYRLYIYRY 271
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 30.6 bits (68), Expect = 0.37
Identities = 34/309 (11%), Positives = 75/309 (24%), Gaps = 35/309 (11%)
Query: 25 SGFISYLDVNNPSTPIRVIK----GHNKPITALALSPDRGTVFTGSHDGFIT-RWNAKTE 79
G I + ++ ++IK ++PI+ + +R ++ + + + + TE
Sbjct: 13 PGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTE 72
Query: 80 YIFATLPRTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKY 139
I G P D + AV +
Sbjct: 73 -IVHEASHPIGGHPRANDADTNTRAIFLLAAKQ-----------------PPYAVYANPF 114
Query: 140 SPSGFYIASGDISGKVRIWDTV-NKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE 198
Y +S ++ V N E+ + G + + P +
Sbjct: 115 YKFAGYGNVFSVSETGKLEKNVQNYEY--QENTGIHG-----MVFDPTETYLYSADLTAN 167
Query: 199 RFGHVFMSETG--TSVGEISGQSKPINSCDFK--PSRPFRIITGSEDNTIAVFEGPPFKF 254
+ +G VG + + P+ + N I + P
Sbjct: 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH 227
Query: 255 KMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAW 314
HS + + V + + + + Y +
Sbjct: 228 MPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGF 287
Query: 315 KPDGTQLLT 323
K +
Sbjct: 288 KLRDCGSIE 296
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 28.1 bits (61), Expect = 2.0
Identities = 27/283 (9%), Positives = 65/283 (22%), Gaps = 23/283 (8%)
Query: 139 YSPSGFYIASGDISGKVRIWDTVNKEH--ILKNEFHPIGGPIKDIAWSPDNQRMVVVGEG 196
Y + +G +G++ D + I K E + GG D ++ V
Sbjct: 32 YIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR 91
Query: 197 RERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFKFKM 256
V T + + + + + E N
Sbjct: 92 L-GLLVVQTDGTFEEIAKKDSEGRRMQ-------GCNDCAFDYEGNLWITAPAGEVAPAD 143
Query: 257 TKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVAWKP 316
+ ++ + + N +
Sbjct: 144 YTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHM------NDGRPYQLIVAETPT 197
Query: 317 DGTQLLTASGDKTCKLWDIETKSAVSEFLMGNQVEDQQVSCLWQGDYLLTVSLSGFISYL 376
G + + + + ++ + + L ++ S I
Sbjct: 198 KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SSHIEVF 252
Query: 377 DVNNPSTPIRVIKGHNKPITALALSPDRGTVF-TGSHDGFITR 418
+ P I+ + + L P T+F T + + +
Sbjct: 253 GPDG-GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWK 294
Score = 27.3 bits (59), Expect = 3.4
Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 5/132 (3%)
Query: 123 ISDIYTEHSCAVNVAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNE----FHPIGGPI 178
+ + AV I + + K+ +D I +
Sbjct: 168 DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG 227
Query: 179 KDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITG 238
D ++ ++V G VF + G I + ++ FKP +T
Sbjct: 228 ADGMDFDEDNNLLVANWGSSHI-EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE 286
Query: 239 SEDNTIAVFEGP 250
E+N + FE
Sbjct: 287 HENNAVWKFEWQ 298
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 28.0 bits (61), Expect = 2.6
Identities = 30/194 (15%), Positives = 55/194 (28%), Gaps = 25/194 (12%)
Query: 137 AKYSPSGFYIASGDISGKVRIWDTV-NKEHIL--KNEFHPIGGPIKDIAWSPDNQRMVVV 193
AK+ +I G VR+W+ N +L + + SPD + +
Sbjct: 22 AKWISDTEFIYREQ-KGTVRLWNVETNTSTVLIEGKKIESL--RAIRYEISPDREYALFS 78
Query: 194 GEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPSRPFRIITGSEDNTIAVFEGPPFK 253
+ H + ++ + S GP +
Sbjct: 79 YNVEPIYQHSYTGYYV------------LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQ 126
Query: 254 FKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGGVYAVA 313
+ E++ + + +Y+G S L E A
Sbjct: 127 QLIFIFENNIY---YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE----EILKTHIAHW 179
Query: 314 WKPDGTQLLTASGD 327
W PDGT+L A+ +
Sbjct: 180 WSPDGTRLAYAAIN 193
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 27.7 bits (60), Expect = 2.8
Identities = 34/306 (11%), Positives = 70/306 (22%), Gaps = 40/306 (13%)
Query: 30 YLDVNNPSTPIRVIKG--HNKPITALALSPDRGTVFTGSHDGFITRWNAKTEY-IFATLP 86
Y D P ++I N + LA +PD T G I I AT+
Sbjct: 8 YADKPIELAPAKIITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVE 67
Query: 87 RTQRGQPIVLGGDPKGKNFLYTNGNSVIIRNIENPAISDIYTEHSCAVNVAKYSPSGFYI 146
G GD + + V + + + + + +N Y+
Sbjct: 68 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYL 127
Query: 147 ASGDISGKVRIWDT--------VNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRE 198
+ G + + D + + ++ + + + + +
Sbjct: 128 TADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLL 187
Query: 199 RFGHVFMSETGTSVGEISGQSKP----------INSCDFKPSRPFRIITGSEDNTIAVFE 248
V ++ Q+ + + RI IA E
Sbjct: 188 LRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAE 247
Query: 249 GPPFKFKMTKQEHSRFVQAVRYSPSGSHFASAGFDGKVFLYDGASADLVSELGNPAHKGG 308
+ F D +Y + +
Sbjct: 248 QGV------------------IGSTAVAFGQTEGDCTA-IYVVTNGGMFLPPPTGVVPAN 288
Query: 309 VYAVAW 314
V +
Sbjct: 289 VVRLEV 294
>d1y14b1 b.40.4.5 (B:81-171) C-terminal domain of RNA polymerase II
subunit RBP7 (RpoE) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 91
Score = 26.0 bits (57), Expect = 3.1
Identities = 10/64 (15%), Positives = 17/64 (26%)
Query: 136 VAKYSPSGFYIASGDISGKVRIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGE 195
V S GF + G + V P +D+ R+ + G
Sbjct: 11 VVSCSQHGFEVQVGPMKVFVTKHLMPQDLTFNAGSNPPSYQSSEDVITIKSRIRVKIEGC 70
Query: 196 GRER 199
+
Sbjct: 71 ISQV 74
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.135 0.415
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,623,103
Number of extensions: 77091
Number of successful extensions: 648
Number of sequences better than 10.0: 1
Number of HSP's gapped: 320
Number of HSP's successfully gapped: 151
Length of query: 423
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 335
Effective length of database: 1,199,356
Effective search space: 401784260
Effective search space used: 401784260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)