BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1308
         (607 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|91080595|ref|XP_973935.1| PREDICTED: similar to Caseinolytic peptidase B protein homolog
           (Suppressor of potassium transport defect 3) [Tribolium
           castaneum]
 gi|270005512|gb|EFA01960.1| hypothetical protein TcasGA2_TC007578 [Tribolium castaneum]
          Length = 593

 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/565 (61%), Positives = 432/565 (76%), Gaps = 13/565 (2%)

Query: 48  CLSVFPKIRQSNNTCMYNNLLFASACSLALTLLECQSIKDLT-----LFRAARYGSAKEL 102
           C   FP  +Q+     +N+    S   L  T L   S  + T     LFRAA+YG  +EL
Sbjct: 22  CAPKFPSFQQNEEKRGFNHPKTDSLAFLGFTGLVIASCDNRTQSNKRLFRAAQYGVVEEL 81

Query: 103 KTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEK 162
           KT I+N K ++N RH LGWTPL VAA+N + + V+ LLEAGA PNLG+ F +  RTA EK
Sbjct: 82  KTLIKN-KANLNARHELGWTPLMVAAVNNQYEAVKALLEAGAEPNLGEEFISAKRTAKEK 140

Query: 163 KMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSG 222
            ++P EVL+ RE+EF++ LN  ++F GF+ALHY V+  N  +V+LL+  GADPT+++ +G
Sbjct: 141 GLHPIEVLMTREEEFSNSLNAKVSFRGFTALHYAVLINNLSIVKLLIDQGADPTIENEAG 200

Query: 223 HIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISA 282
           H P  YA + ++K  LQ+   K+ +++++ E EERR++PLE+RLK RIVGQE AI I+SA
Sbjct: 201 HTPLAYAVEGDLKNYLQEKTSKFEEIKKQNELEERRRFPLEERLKTRIVGQEGAITIVSA 260

Query: 283 AIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHE 342
            I+RKENGW DD+HPLVFLFLGSSGIGKTELAKQLA YIH++K +AFIRLDMSEYQEKHE
Sbjct: 261 TIRRKENGWGDDEHPLVFLFLGSSGIGKTELAKQLAAYIHKEKPQAFIRLDMSEYQEKHE 320

Query: 343 VAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDG 402
           VAKLIGAPPGY+GHD+GGQLT RLK+CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDG
Sbjct: 321 VAKLIGAPPGYIGHDEGGQLTSRLKQCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDG 380

Query: 403 KGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHF 462
            GKTIECK+AIF+MTSNLAS+EIAQH L+LR+E E       S +  +  + ++TISR F
Sbjct: 381 HGKTIECKNAIFIMTSNLASDEIAQHGLKLRQEIENLRANRLSNTTDEEISDNITISRKF 440

Query: 463 KDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIV 522
           KD VV+PILKRHF+RDEFLGRINEIVYFLPFS++EL  LV RE++ WA++A DKH I++ 
Sbjct: 441 KDEVVKPILKRHFKRDEFLGRINEIVYFLPFSRTELLQLVSREMSVWAQRAKDKHKIDLN 500

Query: 523 WDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQW-SKEV 581
           WD  VE+ LADGYDVHYGARSIK+EVER+VV+QLAAAHE   IGKGS V++   W  K +
Sbjct: 501 WDRSVESALADGYDVHYGARSIKYEVERRVVNQLAAAHESGFIGKGSVVQVTTVWHEKTL 560

Query: 582 SEDSAKGGIIKLKVKKKGMKDFIDV 606
           S +      IKL+VK KG K F+DV
Sbjct: 561 SPE------IKLRVKSKGAKGFVDV 579


>gi|242023901|ref|XP_002432369.1| suppressor of potassium transport defect, putative [Pediculus
           humanus corporis]
 gi|212517792|gb|EEB19631.1| suppressor of potassium transport defect, putative [Pediculus
           humanus corporis]
          Length = 682

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/566 (59%), Positives = 435/566 (76%), Gaps = 12/566 (2%)

Query: 52  FPKIRQSNNTCMYNNLLFASAC---SLALTLLEC---QSIKDLTLFRAARYGSAKELKTF 105
           + + ++SN    Y+N          SL+L +  C    ++ +  LFRAA+YG+  E+K  
Sbjct: 105 YERYQRSNEKQWYDNDFIKWKILPGSLSLVVAGCFGEINVNEKRLFRAAQYGNDTEIKN- 163

Query: 106 IENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMN 165
           + +  +D+N RHP+GWT LHVA+IN ++  V+ LL+AGA+P+LGD F  + RTA EK ++
Sbjct: 164 LASEGMDMNTRHPMGWTALHVASINSRLGVVKALLKAGADPDLGDDFINIQRTAIEKGLH 223

Query: 166 PFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIP 225
              VL+ RE+EF++ LN   TF GF+ALHY V+A + EV+E LL+ GA+P  ++++GH P
Sbjct: 224 SMNVLMVREEEFSNRLNNRATFQGFTALHYAVLADDVEVIEALLEGGANPLKENDAGHRP 283

Query: 226 SDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIK 285
           SDYA + ++K +L KYA K+ ++Q+++EA+ERR++P+E RLK+ IVGQE  I I++AAI+
Sbjct: 284 SDYAREGDVKNMLLKYAVKFDEIQKQREADERRRFPIEMRLKEHIVGQEGPIAIVAAAIR 343

Query: 286 RKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAK 345
           RKENGW DD+HPLVFLFLGSSGIGKTELAKQLA YIH+DK+ AFIRLDMSEYQEKHEVAK
Sbjct: 344 RKENGWADDEHPLVFLFLGSSGIGKTELAKQLARYIHKDKQNAFIRLDMSEYQEKHEVAK 403

Query: 346 LIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGK 405
           LIGAPPGY+GHDDGGQLTKRLKK PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKG+
Sbjct: 404 LIGAPPGYIGHDDGGQLTKRLKKFPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGR 463

Query: 406 TIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD----VTISRH 461
           TI CKDA+FVMTSNLAS+EIA++A+QLRKE EE +K    +      N      VT+SR 
Sbjct: 464 TIMCKDAVFVMTSNLASDEIAEYAIQLRKEAEEINKNKYKMEGKGEDNASMTEQVTVSRD 523

Query: 462 FKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI 521
           FK+ VVQPILKRHFRRDEFLGRINEIVYFLPFS+SEL  LV +EL++W K+A +KH I +
Sbjct: 524 FKEEVVQPILKRHFRRDEFLGRINEIVYFLPFSQSELLKLVTKELDYWKKRAFEKHGIEL 583

Query: 522 VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSK-E 580
            WD +V   LADGYDVHYGARSIK+EVER+++SQ+AA HE+ V+  G  V++ V W K +
Sbjct: 584 TWDPEVAAALADGYDVHYGARSIKYEVERRLISQIAAGHEQGVVTPGCAVKIKVTWPKSD 643

Query: 581 VSEDSAKGGIIKLKVKKKGMKDFIDV 606
            S  +     + L V++KG KDF++V
Sbjct: 644 GSTKTETHSTLNLHVRQKGQKDFVEV 669


>gi|307180438|gb|EFN68464.1| Caseinolytic peptidase B protein-like protein [Camponotus
           floridanus]
          Length = 642

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/540 (60%), Positives = 412/540 (76%), Gaps = 8/540 (1%)

Query: 68  LFASACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           +  S     + L +  ++ +   FRA +YG+  EL+  I +  +DVN+RH LGWT LH A
Sbjct: 97  MLLSGLGFIVALCDAPNLAEKRFFRAVQYGNISELRKAIADG-IDVNVRHSLGWTALHTA 155

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF 187
           AIN KV+ +++LL  GA+ N GD F  V+RTA EK ++  +VL+KRE+EF+D LN   TF
Sbjct: 156 AINQKVEVIKILLHNGADINAGDNFVNVYRTAMEKGLHSLDVLMKREEEFSDRLNNRATF 215

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            GF+ALHY V+A +   V+ LL  GA+PTV++ +GH   DYA++  IK++L K+A KY +
Sbjct: 216 QGFTALHYAVLADSKICVKTLLDEGANPTVENEAGHRAVDYAKEGEIKEMLIKHAIKYDE 275

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
           + +EKEAEERR++PLEQRLK  IVGQE  I+I+++ I+RKENGW D++HPLVFLFLGSSG
Sbjct: 276 IVKEKEAEERRRFPLEQRLKQHIVGQEGPISIVASTIRRKENGWIDEEHPLVFLFLGSSG 335

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQLA YIH+DK+++FIRLDMSEYQ+KHEVAKLIGAPPGY+GHDDGGQLTK LK
Sbjct: 336 IGKTELAKQLAAYIHKDKRDSFIRLDMSEYQQKHEVAKLIGAPPGYVGHDDGGQLTKLLK 395

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           K P+AVVLFDEVDKAHPDVLT+LLQLFDEGRLTDGKGKTIECK+AIFVMTSNL S EIA+
Sbjct: 396 KYPSAVVLFDEVDKAHPDVLTILLQLFDEGRLTDGKGKTIECKNAIFVMTSNLGSEEIAE 455

Query: 428 HALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEI 487
           HA+QLR E E         S        + ISR+FKD VV+PILK HFRRDEFLGRINEI
Sbjct: 456 HAMQLRAEAERLLNHRLINSDEDQEPERIEISRNFKDQVVRPILKAHFRRDEFLGRINEI 515

Query: 488 VYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHE 547
           VYFLPFS++EL  LV REL  WA +A ++H I + WD ++ ++LADGYDVHYGARSIK+E
Sbjct: 516 VYFLPFSRAELMKLVTRELETWATRAKERHMIELKWDREILSVLADGYDVHYGARSIKYE 575

Query: 548 VERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKGMKDFIDVV 607
           VER+VV+QLAAAHE+  +GKG  V L  +W +        G  I L V++KG K+F+D++
Sbjct: 576 VERRVVNQLAAAHERGQLGKGCCVLLKAKWHE-------SGASITLSVRQKGSKNFVDII 628


>gi|332026312|gb|EGI66446.1| Caseinolytic peptidase B protein-like protein [Acromyrmex
           echinatior]
          Length = 609

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/541 (60%), Positives = 410/541 (75%), Gaps = 9/541 (1%)

Query: 68  LFASACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           +F  +    +   +    K+   FRA +YG+  ELK  I  S +DVN+RHPLGWT L  A
Sbjct: 63  IFLGSLGFVVAFCDTSHFKEKKFFRAVQYGNISELKRSIA-SGIDVNIRHPLGWTALQTA 121

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF 187
           AIN K D +++LL+ GA+ N GD F  V+RTA EK +   +VL KRE+EF+D LN   TF
Sbjct: 122 AINQKEDIIKILLDNGADVNAGDNFVNVYRTAMEKGLPSLDVLTKREEEFSDRLNNRATF 181

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            GF+ALHY V+A +   V+ LL  GA+PT+++ +GH   +YA++  +K++L K+A KY +
Sbjct: 182 QGFTALHYAVLANSETCVKALLDGGANPTIENEAGHRAVEYAKEREMKEMLIKHAIKYDE 241

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
           + +EKEAEERR++PLEQRLK  IVGQE +I+I+++ I+RKENGW D++HPLVFLFLGSSG
Sbjct: 242 IVKEKEAEERRRFPLEQRLKQHIVGQEGSISIVASTIRRKENGWIDEEHPLVFLFLGSSG 301

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQLA YIHR+K ++FIRLDMSEYQ KHEVAKLIGAPPGY+GHDDGGQLTK LK
Sbjct: 302 IGKTELAKQLAAYIHRNKSDSFIRLDMSEYQGKHEVAKLIGAPPGYVGHDDGGQLTKLLK 361

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           K P+AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECK+AIF+MTSNL S EIA+
Sbjct: 362 KYPSAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLGSEEIAE 421

Query: 428 HALQLRKEGEE-FSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           HA+QLR E E   + R  + +        + ISR+FKD VV+PILK HFRRDEFLGRINE
Sbjct: 422 HAIQLRAEAERLLNHRLANTTDENQEPEHIEISRNFKDQVVRPILKNHFRRDEFLGRINE 481

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           IVYFLPFS++EL  LV REL  WAK+A ++H I + WD +V ++LADGYDVHYGARSIK+
Sbjct: 482 IVYFLPFSRTELIELVARELKTWAKRAKERHMIELKWDREVLSVLADGYDVHYGARSIKY 541

Query: 547 EVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKGMKDFIDV 606
           EVER+VV+QLAAAHE+  +GKG  V L  +W +        G  I L V+KKG + F+D+
Sbjct: 542 EVERRVVNQLAAAHERGELGKGCCVLLKAKWHE-------SGASITLSVQKKGSEKFVDI 594

Query: 607 V 607
            
Sbjct: 595 A 595


>gi|322792402|gb|EFZ16386.1| hypothetical protein SINV_11479 [Solenopsis invicta]
          Length = 642

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/533 (60%), Positives = 407/533 (76%), Gaps = 9/533 (1%)

Query: 76  ALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDN 135
           A+   +    K+   FRA +YG+  ELK  I +  +DVN RH +GWT L  AAIN + D 
Sbjct: 108 AVVFCDASHFKEKRFFRAVQYGNIAELKKCIADG-IDVNTRHQMGWTALQTAAINQREDV 166

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           +++LL+ GA+ N GD F  V++TA EK ++  +VL+KRE+EF+D LN   TF GF+ALHY
Sbjct: 167 IKILLDNGADINAGDNFVNVYKTAMEKGLHSLDVLMKREEEFSDRLNNRATFKGFTALHY 226

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+PT+++ +G+   +Y ++  I+++L K+A KY ++ +EKEAE
Sbjct: 227 AVLADSKACVKALLDGGANPTIENEAGYRAVEYTKEGEIREMLVKHAIKYDEMVKEKEAE 286

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK  IVGQE  I+I+++ I+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 287 ERRRFPLEQRLKQHIVGQEGPISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAK 346

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           QLA YIH++K +AFIRLDMSEYQ KHEVAKLIGAPPGY+GHDDGGQLTK LKKCP+AVVL
Sbjct: 347 QLAAYIHKNKLDAFIRLDMSEYQGKHEVAKLIGAPPGYVGHDDGGQLTKLLKKCPSAVVL 406

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECK+AIF+MTSNL S EIA+HALQLR E
Sbjct: 407 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLGSEEIAEHALQLRAE 466

Query: 436 GEE-FSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFS 494
            E   + R  + S        + ISR+FKD VV+PILK HFRRDEFLGRINEIVYFLPFS
Sbjct: 467 AERLLNHRLVNTSNEDQEPEHIEISRNFKDQVVRPILKNHFRRDEFLGRINEIVYFLPFS 526

Query: 495 KSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVS 554
           ++EL  LV REL  W+ +A ++H I + WD +V ++LADGYDVHYGARSIK+EVER+V++
Sbjct: 527 RAELIELVARELKAWSTRAKERHMIELKWDREVLSVLADGYDVHYGARSIKYEVERRVIN 586

Query: 555 QLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKGMKDFIDVV 607
           QLAAAHE+  +GKG  V L  +W +        G  I L V++KG K F+D++
Sbjct: 587 QLAAAHERGELGKGCCVLLKAKWHE-------SGATITLSVQQKGSKKFVDII 632


>gi|383853509|ref|XP_003702265.1| PREDICTED: caseinolytic peptidase B protein homolog [Megachile
           rotundata]
          Length = 670

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/541 (60%), Positives = 411/541 (75%), Gaps = 10/541 (1%)

Query: 68  LFASACSLALTLLECQSI-KDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHV 126
           + +S   +++ L E  +  K+   F+AA+YG  K+LK  ++ S +DVN+RHPLGWT LHV
Sbjct: 124 IVSSGFGISIALCEASNFHKEKEFFQAAKYGDIKKLKAILK-SGIDVNVRHPLGWTALHV 182

Query: 127 AAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMT 186
           AAIN +   V++L+E GA+ N  D F  V+ TA EK +   +VL  RE EF+D LN   T
Sbjct: 183 AAINFQPKVVKLLIEHGADVNAQDEFINVYATAIEKGLQILDVLSTREQEFSDYLNSRAT 242

Query: 187 FLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYA 246
           F GF+ LHY V+  + +    L+ + ADPT+K  SGH P +YAE+  +K+IL KY+ KY 
Sbjct: 243 FKGFTPLHYAVLVNSKDCAVELMNAAADPTIKAESGHGPIEYAENGELKEILTKYSIKYD 302

Query: 247 DLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSS 306
           ++++EKE EERRK+PLEQRLK  IVGQ+ AI+I+++ I+RKENGW D+ HPLVFLFLGSS
Sbjct: 303 NIKKEKEMEERRKFPLEQRLKKYIVGQDGAISIVASTIRRKENGWIDEKHPLVFLFLGSS 362

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           GIGKTELAKQLA YIH++K E FIRLDMSEYQEKHEVAKLIGAPPGY+GHDDGGQLTK+L
Sbjct: 363 GIGKTELAKQLAAYIHKNKPEGFIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTKQL 422

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           +KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECK+AIFVMTSNLAS  IA
Sbjct: 423 RKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFVMTSNLASEVIA 482

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLD-VTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           +HA+QLR+E +  S +    S     N + + ISR+FKD VV+PILK HFRRDEFLGRIN
Sbjct: 483 EHAVQLREETQRVSDQKHDQSMDINENSEHIEISRNFKDKVVRPILKSHFRRDEFLGRIN 542

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPFS+SEL  LV +EL  WA++A ++H I + W+ +V ++LA+GYD HYGARSIK
Sbjct: 543 EIVYFLPFSQSELIKLVAKELEAWAERAKERHKIELKWNREVLSLLAEGYDTHYGARSIK 602

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKGMKDFID 605
           +EVER+VV+QLAAAHE+  +G G  V L V W K        G  I L +++K  KDF+D
Sbjct: 603 YEVERRVVNQLAAAHERGQLGTGCSVLLKVIWQK-------GGASIALSIRRKDSKDFVD 655

Query: 606 V 606
           +
Sbjct: 656 I 656


>gi|350400658|ref|XP_003485912.1| PREDICTED: caseinolytic peptidase B protein homolog [Bombus
           impatiens]
          Length = 643

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/532 (60%), Positives = 409/532 (76%), Gaps = 13/532 (2%)

Query: 78  TLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVR 137
            L E ++ +D   F AA+YG+ +EL   I+   +DVNMRHPLGWT LH+AAIN K + V+
Sbjct: 109 ALCEAKNHRDKQFFLAAKYGNIRELTNIIKEG-IDVNMRHPLGWTALHLAAINAKPEVVK 167

Query: 138 VLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGV 197
           +LL+ GA+ NL D F  V+ TA EK ++  +VL+ RE+EF D LN   TF GF+ALHY V
Sbjct: 168 LLLKHGADANLQDEFINVYGTAIEKGLHTLDVLMIREEEFCDHLNSRATFKGFTALHYAV 227

Query: 198 VAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEER 257
           +A +   V+ LL++GADPT+K+ SGH   +YA+D  +K++L K A KY ++ +EKE EER
Sbjct: 228 LADSKPCVQALLEAGADPTMKNESGHRAVEYAKDGELKEMLIKRAIKYDEIMKEKELEER 287

Query: 258 RKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQL 317
           R++PLEQRL+  IVGQ  AI+I+++ I+RKENGW D+ HPLVFLFLGSSGIGKTELAKQL
Sbjct: 288 RRFPLEQRLRQYIVGQTGAISIVASTIRRKENGWIDEKHPLVFLFLGSSGIGKTELAKQL 347

Query: 318 AFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFD 377
           A YIH++K+E FIRLDMSEYQEKHEVAKLIGAPPGY+GHDDGGQLTK L+KCPNAVVLFD
Sbjct: 348 AAYIHKNKQEGFIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTKLLRKCPNAVVLFD 407

Query: 378 EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGE 437
           EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECK+AIF+MTSNLAS  IA HA+ LR+E +
Sbjct: 408 EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLASEVIADHAVHLREEAQ 467

Query: 438 EFSKRTPSISKSQGSNLD---VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFS 494
              ++   + K+  +  D   + ISR FKD VV+PILK HF RDEFLGRINEIVYFLPFS
Sbjct: 468 RVMEQ--KLDKNVDTEEDPEHIEISRKFKDEVVRPILKSHFGRDEFLGRINEIVYFLPFS 525

Query: 495 KSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVS 554
           +SEL +LV +EL  WA +A  +H I + W+ +V ++LA+GYD HYGARSIK+E+ER+VV+
Sbjct: 526 QSELISLVVKELETWADRAKKRHKIELKWNREVLSLLAEGYDTHYGARSIKYEIERRVVN 585

Query: 555 QLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKGMKDFIDV 606
           QLAAAHE+  + KG  V L V+W K        G  I L +++KG KDF+D+
Sbjct: 586 QLAAAHERGQLEKGCCVLLKVKWYK-------NGANIALSIRRKGAKDFVDL 630


>gi|340711024|ref|XP_003394082.1| PREDICTED: caseinolytic peptidase B protein homolog [Bombus
           terrestris]
          Length = 643

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/547 (59%), Positives = 416/547 (76%), Gaps = 14/547 (2%)

Query: 64  YNNLLFA-SACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWT 122
           + NL F      + + L E ++ +D   F AA+YG+ +EL   I+   +DVNMRHPLGWT
Sbjct: 94  FKNLGFILGGIGITIALCEAKNHRDKQFFLAAKYGNIEELTNIIKEG-IDVNMRHPLGWT 152

Query: 123 PLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLN 182
            LH+AAIN K + V++LL+ GA+ N  D F  V+ TA EK ++  +VL+ RE+EF D LN
Sbjct: 153 ALHLAAINAKPEVVKLLLKHGADVNAQDEFINVYGTAIEKGLHTLDVLMIREEEFCDHLN 212

Query: 183 PNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYA 242
              TF GF+ALHY V+A +   V+ LL++GADPT+K+ SG+   +YA+D  +K++L K A
Sbjct: 213 SRATFKGFTALHYAVLADSKPCVQALLEAGADPTMKNESGYRAVEYAKDGEVKEMLIKRA 272

Query: 243 EKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLF 302
            KY ++ +EKE EERR++PLEQRL+  IVGQ  AI+I+++ I+RKENGW D+ HPLVFLF
Sbjct: 273 IKYDEIMKEKELEERRRFPLEQRLRQYIVGQTGAISIVASTIRRKENGWIDEKHPLVFLF 332

Query: 303 LGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQL 362
           LGSSGIGKTELAKQLA YIH++K+E FIRLDMSEYQEKHEVAKLIGAPPGY+GHDDGGQL
Sbjct: 333 LGSSGIGKTELAKQLAAYIHKNKQEGFIRLDMSEYQEKHEVAKLIGAPPGYIGHDDGGQL 392

Query: 363 TKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLAS 422
           TK L+KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECK+AIF+MTSNLAS
Sbjct: 393 TKLLRKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKNAIFIMTSNLAS 452

Query: 423 NEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD---VTISRHFKDHVVQPILKRHFRRDE 479
             IA HA+ LR+E +   ++   + K+  +  D   + ISR FKD VV+PILK HF RDE
Sbjct: 453 EVIADHAVHLREEAQRVMEQ--KLDKNADTEEDPEHIEISRKFKDEVVRPILKSHFGRDE 510

Query: 480 FLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHY 539
           FLGRINEIVYFLPFS+SEL +LV +EL  WA +A  +H I + W+ +V ++LA+GYD HY
Sbjct: 511 FLGRINEIVYFLPFSQSELISLVVKELETWADRAKKRHKIELKWNREVLSLLAEGYDTHY 570

Query: 540 GARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKG 599
           GARSIK+E+ER+VV+QLAAAHE+  + KG  V L V+W K    +SA    I L +++KG
Sbjct: 571 GARSIKYEIERRVVNQLAAAHERGQLEKGCCVLLKVKWHK----NSAN---IALSIRRKG 623

Query: 600 MKDFIDV 606
            KDF+D+
Sbjct: 624 AKDFVDL 630


>gi|345486795|ref|XP_001607140.2| PREDICTED: caseinolytic peptidase B protein homolog [Nasonia
           vitripennis]
          Length = 631

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/520 (63%), Positives = 405/520 (77%), Gaps = 10/520 (1%)

Query: 90  LFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLG 149
            F AA+YG+  +LK  I +S LDVN RH LGWT L  AAING+V+ +R L+E GA+ N G
Sbjct: 107 FFLAAQYGNILDLKKAI-DSGLDVNTRHSLGWTALQTAAINGRVEALRYLIERGADINAG 165

Query: 150 DLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLL 209
           D F  V++TA EK+M+P +VL +RE+EF+D L    TF GF+ALHY V+A + + V+ LL
Sbjct: 166 DNFVNVYKTAMEKRMHPSDVLSEREEEFSDRLIARATFKGFTALHYAVLARSKDCVKALL 225

Query: 210 KSGADPTVKDNSGHIPSDYA-EDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKD 268
            +GA+PT+++ +G    DYA  D  I+ +L K+A KY ++ +EKEAEERR++PLEQRLK 
Sbjct: 226 DAGANPTIENEAGRRAVDYAYMDKEIEDMLIKHALKYDEIIKEKEAEERRRFPLEQRLKQ 285

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEA 328
            IVGQE AI+I+++ I+RKENGW D++HPLVFLFLGSSGIGKTELAKQLA YIHR+K ++
Sbjct: 286 FIVGQEGAISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKTELAKQLAAYIHRNKPDS 345

Query: 329 FIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLT 388
           FIRLDMSEYQEKHEVAKLIGAPPGY+GHDDGGQLTK L+K P+AVVLFDEVDKAHPDVLT
Sbjct: 346 FIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTKLLRKSPSAVVLFDEVDKAHPDVLT 405

Query: 389 VLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEE-FSKRTPSIS 447
           VLLQLFDEGRLTDGKGKTIECKDAIF+MTSNLAS EIA+HA+QLR+E E   +KR    +
Sbjct: 406 VLLQLFDEGRLTDGKGKTIECKDAIFIMTSNLASEEIAEHAMQLREEAERLLTKRLDDKT 465

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  ++ ISR+FKD VV+PILK HFRRDEFLGRINEIVYFLPFS++EL  LV REL 
Sbjct: 466 NDDQEPENIEISRNFKDQVVRPILKSHFRRDEFLGRINEIVYFLPFSRAELIKLVVRELE 525

Query: 508 FWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGK 567
            WA +A ++H I + WD +V ++LADGYD HYGARSIKHEVER+VV+QLA AHE+  +  
Sbjct: 526 AWASRARERHKIELKWDREVLSVLADGYDAHYGARSIKHEVERRVVNQLATAHERGQLDP 585

Query: 568 GSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKGMKDFIDVV 607
           G  V L  +W K        G  I L VK KG+KDF+D+V
Sbjct: 586 GCCVLLKARWHK-------NGASIGLSVKPKGVKDFVDLV 618


>gi|390351646|ref|XP_786389.2| PREDICTED: caseinolytic peptidase B protein homolog
           [Strongylocentrotus purpuratus]
          Length = 544

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/522 (59%), Positives = 401/522 (76%), Gaps = 6/522 (1%)

Query: 91  FRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGD 150
           F A+R     E+   +  S  +VN RH LGWT LHVA IN     +R LL+AGA+PN+GD
Sbjct: 9   FLASRKDDVDEISRLLR-SGFNVNARHQLGWTALHVATINRHEKALRALLKAGADPNIGD 67

Query: 151 LFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLK 210
            F++V +TA EK +N  +VL  RED+F+D LN   +F G +ALHY V++ +  +V +LL+
Sbjct: 68  EFSSVWQTAQEKSLNSLQVLYDREDDFSDRLNNRASFRGCTALHYAVLSNDINIVRILLE 127

Query: 211 SGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRI 270
           +GADP + + +GH P  YA+   IKQ+L++ ++K++ LQ ++ AEERR++PLEQRL + I
Sbjct: 128 AGADPMITNENGHTPMQYAKGQAIKQLLEENSKKFSALQAKRAAEERRRFPLEQRLTEFI 187

Query: 271 VGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFI 330
           +GQ+ AI  ++AA++RKENGW D+DHPLVFLFLGSSGIGKTELAKQ+A Y+H+D K  FI
Sbjct: 188 IGQDGAIATVAAAVRRKENGWMDEDHPLVFLFLGSSGIGKTELAKQIARYMHKDVKNGFI 247

Query: 331 RLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVL 390
           R+DMSEYQEKHEVAK IGAPPGY+GHD GGQLTK+LK+ PNAVVLFDEVDKAHPDVLT++
Sbjct: 248 RMDMSEYQEKHEVAKFIGAPPGYVGHDQGGQLTKKLKQNPNAVVLFDEVDKAHPDVLTIM 307

Query: 391 LQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSK-RTPSISKS 449
           LQLFDEGRLTDGKGKTIECKDAIFVMTSN+AS+EIA HALQLR+E +   K R  +  +S
Sbjct: 308 LQLFDEGRLTDGKGKTIECKDAIFVMTSNIASDEIASHALQLRREAKAMMKQRQTAQVES 367

Query: 450 QGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFW 509
                 VTIS+ FK+ VVQPILKRHFRRDEFLGRINE+VYFLPFS++EL  LV +ELNFW
Sbjct: 368 AEMTEQVTISKRFKEDVVQPILKRHFRRDEFLGRINEMVYFLPFSRAELIRLVSKELNFW 427

Query: 510 AKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGS 569
           A +A D+H + + WD++V  +LADGYDVHYGARSIKHEVER++V+QLAAA EK +I +G 
Sbjct: 428 ATRAKDRHEMELTWDVEVLEVLADGYDVHYGARSIKHEVERRIVNQLAAAQEKLLISQGC 487

Query: 570 FVRLYVQWSKEVSEDSAKGGI----IKLKVKKKGMKDFIDVV 607
            + + V      ++ S    +    +KL+V KKG K+ ++++
Sbjct: 488 KLHIAVDAGSHDNKMSGSQDLQQTKLKLQVIKKGKKETVNIL 529


>gi|442760143|gb|JAA72230.1| Hypothetical protein [Ixodes ricinus]
          Length = 609

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 317/569 (55%), Positives = 412/569 (72%), Gaps = 9/569 (1%)

Query: 39  QSTQADFKSCLSVFPKIRQSNNTCMYNNLLFASACSLALTLLECQSIKDLTLFRAARYGS 98
           QS++ + +  ++V           +   L    AC L        +  +  L RA++ G 
Sbjct: 26  QSSRRNLRRMVAVSQATSVQWKAGLACALPVGVACCLVANSSRGSNPGEDKLLRASKLGH 85

Query: 99  AKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRT 158
             E++  ++NSK+D N RH LGWTPLHVAAING  + +  LL+AGA+ N GD F+ V++T
Sbjct: 86  VDEVQRLLKNSKVDPNCRHALGWTPLHVAAINGHCNVMAALLDAGADVNAGDEFSNVYQT 145

Query: 159 AAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVK 218
           A EK MN  EVL+ REDEF++ L+   +F G +ALHY V+A +   V  LL+  ADPT  
Sbjct: 146 AREKDMNSLEVLVLREDEFSNRLSNRASFSGCTALHYAVLADDVATVRTLLERNADPTCC 205

Query: 219 DNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAIN 278
           ++ GH P+DY  + ++++ILQ++ +K+ +  ++ EAEERR++PLEQR+K  IVGQE AI 
Sbjct: 206 NDQGHQPADYTRNPSVREILQEHVDKHKERMQKLEAEERRRFPLEQRVKQVIVGQEGAIA 265

Query: 279 IISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDK-----KEAFIRLD 333
           +++A I+RKE GW DD+HPLVFLFLGSSGIGKTELAKQLA Y+H DK     K+ FIRLD
Sbjct: 266 LVAATIRRKELGWFDDEHPLVFLFLGSSGIGKTELAKQLAEYLHGDKRGKGTKKGFIRLD 325

Query: 334 MSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQL 393
           MSEYQEKHEVAKLIG+PPGY+GHDDGGQLT+RL++CP AVVL DEVDKAHPDVLTVLLQL
Sbjct: 326 MSEYQEKHEVAKLIGSPPGYVGHDDGGQLTRRLRECPTAVVLLDEVDKAHPDVLTVLLQL 385

Query: 394 FDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISK--SQG 451
           FDEGRLTDGKGKTI CKDAIFVMTSNLAS+EIAQHA +LR+E E  +++  ++ +  SQ 
Sbjct: 386 FDEGRLTDGKGKTIVCKDAIFVMTSNLASDEIAQHATELRREVERLAQQRMALHRVESQD 445

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAK 511
              +V+I   FK+ VV+PILKRHFRRDEFLGRINEIVYFLPFS+ EL  LV REL  W +
Sbjct: 446 PAEEVSIRNDFKERVVRPILKRHFRRDEFLGRINEIVYFLPFSRKELTALVTRELEGWTR 505

Query: 512 KALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
           +A ++H I + W+  V  +LADGY+VHYGARS+KHEVERQVV++LA AHEK +I  G  V
Sbjct: 506 RARERHGIELTWERRVVELLADGYNVHYGARSVKHEVERQVVNRLAEAHEKQLIDAGCTV 565

Query: 572 RLYVQWSKEVSEDSAKGGIIKLKVKKKGM 600
            L V+  +  +  S K G++     +KG+
Sbjct: 566 HLVVEGPE--AGHSPKVGLLVRSKSQKGI 592


>gi|241120636|ref|XP_002402954.1| suppressor of potassium transport defect, putative [Ixodes
           scapularis]
 gi|215493368|gb|EEC03009.1| suppressor of potassium transport defect, putative [Ixodes
           scapularis]
          Length = 609

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 315/541 (58%), Positives = 402/541 (74%), Gaps = 9/541 (1%)

Query: 67  LLFASACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHV 126
           L    AC L        +  +  L RAA+ G   E++  ++NSK+D N RH LGWTPLHV
Sbjct: 54  LPVGVACCLVANSSRGSNPGEDKLLRAAKLGHVDEVQRLLKNSKVDPNCRHALGWTPLHV 113

Query: 127 AAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMT 186
           AAING  + +  LL+AGA+ N GD F+ V++TA EK MN  EVL+ REDEF++ L+   +
Sbjct: 114 AAINGHCNVMAALLDAGADVNAGDEFSNVYQTAREKNMNSLEVLVLREDEFSNRLSNRAS 173

Query: 187 FLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYA 246
           F G +ALHY V+A +   V  LL+  ADPT  ++ GH P+DY  + ++++ILQ++ +K+ 
Sbjct: 174 FSGCTALHYAVLADDVATVRTLLERNADPTCCNDQGHQPADYTRNPSVRKILQEHVDKHK 233

Query: 247 DLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSS 306
           +  ++ EAEERR++PLEQR+K  IVGQE AI +++A I+RKE GW DD+HPLVFLFLGSS
Sbjct: 234 ERMQKLEAEERRRFPLEQRVKQVIVGQEGAIALVAATIRRKELGWFDDEHPLVFLFLGSS 293

Query: 307 GIGKTELAKQLAFYIHRDK-----KEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQ 361
           GIGKTELAKQLA Y+H DK     K+ FIRLDMSEYQEKHEVAKLIG+PPGY+GHDDGGQ
Sbjct: 294 GIGKTELAKQLAEYLHGDKRGKGTKKGFIRLDMSEYQEKHEVAKLIGSPPGYVGHDDGGQ 353

Query: 362 LTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLA 421
           LT+RL++CP AVVL DEVDKAHPDVLTVLLQLFDEGRLTDGKGKTI CKDAIFVMTSNLA
Sbjct: 354 LTRRLRECPTAVVLLDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIVCKDAIFVMTSNLA 413

Query: 422 SNEIAQHALQLRKEGEEFSKRTPSISK--SQGSNLDVTISRHFKDHVVQPILKRHFRRDE 479
           S+EIAQHA +LR+E E  +++  ++ +  SQ    +V+I   FK+ VV+PILKRHFRRDE
Sbjct: 414 SDEIAQHATELRREVERLAQQRMALHRDESQDPAEEVSIRNDFKERVVRPILKRHFRRDE 473

Query: 480 FLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHY 539
           FLGRINEIVYFLPFS+ EL  LV REL  W ++A ++H I + W+  V  +LADGY+VHY
Sbjct: 474 FLGRINEIVYFLPFSRKELTALVTRELEGWTRRARERHGIELTWERRVVELLADGYNVHY 533

Query: 540 GARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKG 599
           GARS+KHEVERQVV++LA AHEK +I  G  V L V+  +  +  S K G++     +KG
Sbjct: 534 GARSVKHEVERQVVNRLAEAHEKQLIDAGCTVHLVVEGPE--AGHSPKVGLLVRSKSQKG 591

Query: 600 M 600
           +
Sbjct: 592 I 592


>gi|427785551|gb|JAA58227.1| Putative caseinolytic peptidase b protein [Rhipicephalus
           pulchellus]
          Length = 606

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 307/523 (58%), Positives = 396/523 (75%), Gaps = 17/523 (3%)

Query: 90  LFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLG 149
           LFRAA+ G+A EL+  + +  +D N RH LGWTPLHVAAI+G  D V  LLEAGA+ + G
Sbjct: 77  LFRAAKLGNADELRRLLADKSVDPNCRHSLGWTPLHVAAISGHCDCVLALLEAGADIDAG 136

Query: 150 DLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLL 209
           D F+ V++ A EK+++  EVL+ REDEF++ L+   +F G +ALHY V+  +T++V+ LL
Sbjct: 137 DEFSNVYQMAREKQLHSLEVLVVREDEFSNRLSNRASFRGCTALHYAVLTDDTQLVKTLL 196

Query: 210 KSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDR 269
           + GADPT+ ++  H+P+DY+ +  ++++L++Y +++   ++++EAEERR++PLEQR+K  
Sbjct: 197 EKGADPTLANDQNHLPADYSRNPVMRKLLKEYTDEHIKKRKQREAEERRRFPLEQRVKQV 256

Query: 270 IVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIH------- 322
           IVGQE AI +++A I+RKE GW DD+HPLVFLFLGSSGIGKTELAKQ+A Y+H       
Sbjct: 257 IVGQEGAIALVAATIRRKELGWFDDEHPLVFLFLGSSGIGKTELAKQMAEYLHGGSTGRS 316

Query: 323 RDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKA 382
               + FIRLDMSEYQEKHEVAKLIG+PPGY+GHDDGGQLT+RL++CPNAVVL DEVDKA
Sbjct: 317 SSGGKGFIRLDMSEYQEKHEVAKLIGSPPGYVGHDDGGQLTQRLRECPNAVVLLDEVDKA 376

Query: 383 HPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR 442
           HPDVLTVLLQLFDEGRLTDGKGKT+ CKDAIFVMTSNLAS EIAQHA  LR++ E  + +
Sbjct: 377 HPDVLTVLLQLFDEGRLTDGKGKTVVCKDAIFVMTSNLASEEIAQHATDLRRDAELLALQ 436

Query: 443 TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLV 502
             S+  S  +  +V+I   FK+ VV+PILKRHFRRDEFLGRINEIVYFLPFS+ EL  LV
Sbjct: 437 RQSLQPSSVAE-EVSIRSDFKERVVRPILKRHFRRDEFLGRINEIVYFLPFSRKELTVLV 495

Query: 503 CRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            REL  W ++A DKH I + W+  V  +LADGY+VHYGARS+KHEVERQVV++LA AHEK
Sbjct: 496 TRELEGWTRRAKDKHGIELTWERRVVELLADGYNVHYGARSVKHEVERQVVNRLAEAHEK 555

Query: 563 SVIGKGSFVRLYVQWSKEVSEDSAKGGI--IKLKVKKKGMKDF 603
            ++  G  V L V       EDS  GG   I L V+ K  ++ 
Sbjct: 556 QLLDSGCAVHLVV-------EDSDDGGPARIALLVRPKSHRNM 591


>gi|443702035|gb|ELU00197.1| hypothetical protein CAPTEDRAFT_151350 [Capitella teleta]
          Length = 620

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 311/521 (59%), Positives = 390/521 (74%), Gaps = 17/521 (3%)

Query: 90  LFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLG 149
           LF AA+ G   +L+  +    L+VN RH LGWT LHVA +N  +  VR+LLEAGA+PN+G
Sbjct: 93  LFAAAKSGDLNQLQRALSQG-LNVNERHELGWTSLHVAVMNKNMKAVRLLLEAGADPNIG 151

Query: 150 DLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGF---SALHYGVVAGNTEVVE 206
           D F    +TA +K MN   VL+ REDEF+D LN + TF  F   ++LHY V+  +  +V+
Sbjct: 152 DEFINAIKTAKDKNMNSLHVLVTREDEFSDRLNNHATFANFKGCTSLHYAVLTDDEAMVQ 211

Query: 207 LLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRL 266
           +LL +GADPT +++ GH P  Y    +IK++L     K+  +++E+EAEERRK+PLE RL
Sbjct: 212 ILLDAGADPTKENDRGHTPMAYVHKQSIKEMLHAGKAKFVQIRKEQEAEERRKFPLELRL 271

Query: 267 KDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKK 326
           K+ I+GQ+ AI  +++AI+RKENGW D+DHPLVFLFLGSSGIGKTELAKQ+A Y+H++ K
Sbjct: 272 KENIIGQDGAITTVASAIRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQVARYLHKNPK 331

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
           + FIR+DMSEYQEKHEVAK IG+PPGY+GHD+GGQLTK+L + PNAVVLFDEVDKAHPDV
Sbjct: 332 KGFIRIDMSEYQEKHEVAKFIGSPPGYVGHDEGGQLTKKLTEQPNAVVLFDEVDKAHPDV 391

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
           LT++LQLFDEGRLTDGKGKTIECKDAIF+MTSNLAS EIA HA+ LR+E EE  ++    
Sbjct: 392 LTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNLASEEIADHAISLRREAEEVHQK---- 447

Query: 447 SKSQGS------NLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            +SQG+      N +VTISR FK++VV+PILK  FRRDEFLGRINEIVYFLPFS SEL  
Sbjct: 448 -RSQGTLSDLELNENVTISRKFKENVVRPILKYQFRRDEFLGRINEIVYFLPFSHSELTK 506

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAH 560
           LV REL+ WA KA  KH I + WD  V  +LADGYDVHYGARSIKHEVER+VVSQLA AH
Sbjct: 507 LVIRELDIWAGKAQQKHGIELTWDRQVVDVLADGYDVHYGARSIKHEVERRVVSQLALAH 566

Query: 561 EKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIK--LKVKKKG 599
           E+ +I KG  + L V  + +      K       +K++KKG
Sbjct: 567 ERLLIEKGCALHLSVHNAHDSLTKGEKNTHTPPVIKIQKKG 607


>gi|170284743|gb|AAI61411.1| LOC100145643 protein [Xenopus (Silurana) tropicalis]
          Length = 675

 Score =  619 bits (1597), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 305/513 (59%), Positives = 388/513 (75%), Gaps = 14/513 (2%)

Query: 71  SACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAIN 130
           +A  LA         K   L  AAR G A E++  +   K+D N RH LGWTPL VAA+ 
Sbjct: 121 TAALLAYCYSRGNKSKGEELLVAARDGIAPEVERLLAE-KVDPNSRHRLGWTPLMVAAMG 179

Query: 131 GKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGF 190
                V+ LL AGA+PNLGD F  VH T+ EK ++  EVL+ REDEF+D LN   +F G 
Sbjct: 180 RNQSIVKSLLRAGADPNLGDEFCNVHETSKEKGLHSLEVLVTREDEFSDRLNNRASFRGC 239

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           +ALHY V+A +   V  LL+ GA+P  K++ GH P DYA +  +KQ+L+ +   + + QR
Sbjct: 240 TALHYAVLADDYGTVRELLEGGANPQQKNDMGHTPIDYAREGELKQLLRGWESWFQEEQR 299

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGK 310
           +++ EERR++PLE+RLK+ IVGQESAI  ++AAI+RKENGW D++HPLVFLFLGSSGIGK
Sbjct: 300 KRDMEERRRFPLERRLKEHIVGQESAIATVAAAIRRKENGWYDEEHPLVFLFLGSSGIGK 359

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TELAKQ A Y+H+D K+ FIRLDMSE+QEKHEVAK IG+PPGY+GH++GGQLTK+LK+CP
Sbjct: 360 TELAKQTARYMHKDIKKGFIRLDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKKLKQCP 419

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL 430
           +AVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTIECKDAIF+MT N  S+EIAQ+ L
Sbjct: 420 DAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTCNAGSDEIAQYGL 479

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLD-------VTISRHFKDHVVQPILKRHFRRDEFLGR 483
           QLR+E  E +K      K    NLD       +TIS+ FK++V++PILK HFRRDEFLGR
Sbjct: 480 QLRQEAHEINK------KRLAQNLDDIQTSEKITISKQFKENVIRPILKAHFRRDEFLGR 533

Query: 484 INEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARS 543
           INEIVYFLPF +SEL  LV +ELN WAKKA  +H+I ++WD +V  +LADGY+VHYGARS
Sbjct: 534 INEIVYFLPFCRSELSQLVRKELNSWAKKAKQRHSITLMWDPEVIDVLADGYNVHYGARS 593

Query: 544 IKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           IKHEVER+VV+QLAAA+E+ ++ +G  +R+ V+
Sbjct: 594 IKHEVERRVVNQLAAAYEQDLLPRGCTLRITVE 626


>gi|426369655|ref|XP_004051800.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Gorilla gorilla gorilla]
          Length = 677

 Score =  613 bits (1581), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 309/511 (60%), Positives = 397/511 (77%), Gaps = 9/511 (1%)

Query: 73  CSLALTLL-----ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           C+LA  L+     +  S KD  L  AAR  + +E+   +     DVN +H LGWT L VA
Sbjct: 116 CALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMVA 174

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF 187
           AIN     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F
Sbjct: 175 AINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASF 234

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +   V+ LL  GADP  ++  GH P DYA +  + ++L+    KY +
Sbjct: 235 KGCTALHYAVLADDYRTVKELLDGGADPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQE 294

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 295 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 354

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 355 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLK 414

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 415 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 474

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FKD+V++PILK HFRRDEFLGRIN
Sbjct: 475 HALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKDNVIRPILKAHFRRDEFLGRIN 533

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 534 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 593

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 594 HEVERRVVNQLAAAYEQDLLPGGCTLRITVE 624


>gi|47718016|gb|AAH70917.1| ClpB caseinolytic peptidase B homolog (E. coli) [Rattus norvegicus]
 gi|149068722|gb|EDM18274.1| rCG39494, isoform CRA_a [Rattus norvegicus]
          Length = 677

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 316/557 (56%), Positives = 418/557 (75%), Gaps = 11/557 (1%)

Query: 26  KRGFQSSKLFYTTQSTQADFKSCLSVFPKIRQSNNTCMYNNLLFASACSLALTLLEC--- 82
           +RG + +++ Y T ++     S     P  + S N       L   A ++AL +++C   
Sbjct: 73  RRG-ERTEIPYLTAASSGRGPSPEETLPG-QDSWNGVPNKAGLGMWALAMAL-VVQCYNK 129

Query: 83  -QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLE 141
             S KD  L  AAR  + +E++  +     DVN RH LGWT L VAAI+     V+VLL 
Sbjct: 130 NPSNKDAALMEAARANNVQEVRRLLSEGA-DVNARHKLGWTALMVAAISHNESVVQVLLA 188

Query: 142 AGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGN 201
           AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +
Sbjct: 189 AGADPNLGDDFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASFKGCTALHYAVLADD 248

Query: 202 TEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYP 261
             +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++P
Sbjct: 249 YSIVKELLGGGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRFP 308

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYI 321
           LEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+
Sbjct: 309 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368

Query: 322 HRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDK 381
           H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDK
Sbjct: 369 HKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDK 428

Query: 382 AHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSK 441
           AHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+
Sbjct: 429 AHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSR 488

Query: 442 R--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELH 499
                ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL 
Sbjct: 489 NRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELI 547

Query: 500 TLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
            LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA
Sbjct: 548 QLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAA 607

Query: 560 HEKSVIGKGSFVRLYVQ 576
           +E+ ++  G  +R+ V+
Sbjct: 608 YEQDLLPGGCTLRITVE 624


>gi|410045547|ref|XP_003952015.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
           troglodytes]
 gi|410045550|ref|XP_003952016.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
           troglodytes]
 gi|410334181|gb|JAA36037.1| ClpB caseinolytic peptidase B homolog [Pan troglodytes]
          Length = 677

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 307/511 (60%), Positives = 397/511 (77%), Gaps = 9/511 (1%)

Query: 73  CSLALTLL-----ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           C+LA  L+     +  S KD  L  AAR  + +E+   +     DVN +H LGWT L VA
Sbjct: 116 CALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMVA 174

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF 187
           AIN     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F
Sbjct: 175 AINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASF 234

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY +
Sbjct: 235 KGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQE 294

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 295 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 354

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 355 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLK 414

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 415 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 474

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRIN
Sbjct: 475 HALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRIN 533

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 534 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 593

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 594 HEVERRVVNQLAAAYEQDLLPGGCTLRITVE 624


>gi|385719194|ref|NP_001245321.1| caseinolytic peptidase B protein homolog isoform 2 [Homo sapiens]
 gi|10435042|dbj|BAB14467.1| unnamed protein product [Homo sapiens]
 gi|119595265|gb|EAW74859.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_b
           [Homo sapiens]
          Length = 677

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 307/511 (60%), Positives = 397/511 (77%), Gaps = 9/511 (1%)

Query: 73  CSLALTLL-----ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           C+LA  L+     +  S KD  L  AAR  + +E+   +     DVN +H LGWT L VA
Sbjct: 116 CALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMVA 174

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF 187
           AIN     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F
Sbjct: 175 AINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASF 234

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY +
Sbjct: 235 KGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQE 294

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 295 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 354

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 355 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLK 414

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 415 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 474

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRIN
Sbjct: 475 HALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRIN 533

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 534 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 593

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 594 HEVERRVVNQLAAAYEQDLLPGGCTLRITVE 624


>gi|148684573|gb|EDL16520.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_d [Mus
           musculus]
          Length = 563

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 306/511 (59%), Positives = 401/511 (78%), Gaps = 9/511 (1%)

Query: 72  ACSLALTLLEC----QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           A ++AL +++C     S KD  L  AAR  + +E++  +     DVN RH LGWT L VA
Sbjct: 3   ALAMAL-VVQCYSKNPSNKDAALMEAARANNVQEVRRLLSEGA-DVNARHKLGWTALMVA 60

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF 187
           +I+     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F
Sbjct: 61  SISHNESVVQVLLAAGADPNLGDEFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASF 120

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +  +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY +
Sbjct: 121 KGCTALHYAVLADDYSIVKELLDRGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYME 180

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 181 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 240

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 241 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLK 300

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 301 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 360

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRIN
Sbjct: 361 HALQLRQEALEMSRNRIAENLGDVQMSD-KITISKNFKENVIRPILKAHFRRDEFLGRIN 419

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 420 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 479

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 480 HEVERRVVNQLAAAYEQDLLPGGCTLRITVE 510


>gi|6677983|ref|NP_033217.1| caseinolytic peptidase B protein homolog [Mus musculus]
 gi|2493735|sp|Q60649.1|CLPB_MOUSE RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
           Full=Suppressor of potassium transport defect 3
 gi|563129|gb|AAA62869.1| SKD3 [Mus musculus]
 gi|29165797|gb|AAH48175.1| ClpB caseinolytic peptidase B homolog (E. coli) [Mus musculus]
 gi|74194260|dbj|BAE24667.1| unnamed protein product [Mus musculus]
 gi|74216057|dbj|BAE23708.1| unnamed protein product [Mus musculus]
 gi|148684572|gb|EDL16519.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_c [Mus
           musculus]
          Length = 677

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 314/558 (56%), Positives = 417/558 (74%), Gaps = 10/558 (1%)

Query: 25  YKRGFQSSKLFYTTQSTQADFKSCLSVFPKIRQSNNTCMYNNLLFASACSLALTLLEC-- 82
           + R  + +++ Y T ++     S     P  + S N       L   A ++AL +++C  
Sbjct: 71  WGRRGERTEIPYLTAASSERGPSPEETLPG-QDSWNGVPNKTGLGMWALAMAL-VVQCYS 128

Query: 83  --QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLL 140
              S KD  L  AAR  + +E++  +     DVN RH LGWT L VA+I+     V+VLL
Sbjct: 129 KNPSNKDAALMEAARANNVQEVRRLLSEGA-DVNARHKLGWTALMVASISHNESVVQVLL 187

Query: 141 EAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAG 200
            AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A 
Sbjct: 188 AAGADPNLGDEFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASFKGCTALHYAVLAD 247

Query: 201 NTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKY 260
           +  +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++
Sbjct: 248 DYSIVKELLDRGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRF 307

Query: 261 PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFY 320
           PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y
Sbjct: 308 PLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKY 367

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVD
Sbjct: 368 MHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVD 427

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S
Sbjct: 428 KAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMS 487

Query: 441 KR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSEL 498
           +     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL
Sbjct: 488 RNRIAENLGDVQMSD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSEL 546

Query: 499 HTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAA 558
             LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAA
Sbjct: 547 IQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAA 606

Query: 559 AHEKSVIGKGSFVRLYVQ 576
           A+E+ ++  G  +R+ V+
Sbjct: 607 AYEQDLLPGGCTLRITVE 624


>gi|74185590|dbj|BAE32689.1| unnamed protein product [Mus musculus]
          Length = 677

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 314/558 (56%), Positives = 417/558 (74%), Gaps = 10/558 (1%)

Query: 25  YKRGFQSSKLFYTTQSTQADFKSCLSVFPKIRQSNNTCMYNNLLFASACSLALTLLEC-- 82
           + R  + +++ Y T ++     S     P  + S N       L   A ++AL +++C  
Sbjct: 71  WGRRGERTEIPYLTAASSERGPSPEETLPG-QDSWNGVPNKTGLGMWALAMAL-VVQCYS 128

Query: 83  --QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLL 140
              S KD  L  AAR  + +E++  +     DVN RH LGWT L VA+I+     V+VLL
Sbjct: 129 KNPSNKDAALMEAARANNVQEVRRLLSEGA-DVNARHKLGWTALMVASISHNESVVQVLL 187

Query: 141 EAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAG 200
            AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A 
Sbjct: 188 AAGADPNLGDEFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASFKGCTALHYAVLAD 247

Query: 201 NTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKY 260
           +  +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++
Sbjct: 248 DYSIVKELLDRGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRF 307

Query: 261 PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFY 320
           PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y
Sbjct: 308 PLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKY 367

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVD
Sbjct: 368 MHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVD 427

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S
Sbjct: 428 KAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMS 487

Query: 441 KR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSEL 498
           +     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL
Sbjct: 488 RNRIAENLGDVQMSD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSEL 546

Query: 499 HTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAA 558
             LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAA
Sbjct: 547 IQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAA 606

Query: 559 AHEKSVIGKGSFVRLYVQ 576
           A+E+ ++  G  +R+ V+
Sbjct: 607 AYEQDLLPGGCTLRITVE 624


>gi|343961061|dbj|BAK62120.1| caseinolytic peptidase B protein homolog [Pan troglodytes]
          Length = 677

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 307/511 (60%), Positives = 397/511 (77%), Gaps = 9/511 (1%)

Query: 73  CSLALTLL-----ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           C+LA  L+     +  S KD  L  AAR  + +E+   +     DVN +H LGWT L VA
Sbjct: 116 CALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMVA 174

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF 187
           AIN     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F
Sbjct: 175 AINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASF 234

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY +
Sbjct: 235 KGCTALHYAVLADDYRTVKELLDGGANPLQRNEVGHTPLDYAREGEVMKLLRTSEAKYQE 294

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 295 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 354

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 355 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLK 414

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 415 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 474

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRIN
Sbjct: 475 HALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRIN 533

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 534 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 593

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 594 HEVERRVVNQLAAAYEQDLLPGGCTLRITVE 624


>gi|26328241|dbj|BAC27861.1| unnamed protein product [Mus musculus]
          Length = 678

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 314/558 (56%), Positives = 417/558 (74%), Gaps = 10/558 (1%)

Query: 25  YKRGFQSSKLFYTTQSTQADFKSCLSVFPKIRQSNNTCMYNNLLFASACSLALTLLEC-- 82
           + R  + +++ Y T ++     S     P  + S N       L   A ++AL +++C  
Sbjct: 71  WGRRGERTEIPYLTAASSERGPSPEETLPG-QDSWNGVPNKTGLGMWALAMAL-VVQCYS 128

Query: 83  --QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLL 140
              S KD  L  AAR  + +E++  +     DVN RH LGWT L VA+I+     V+VLL
Sbjct: 129 KNPSNKDAALMEAARANNVQEVRRLLSEGA-DVNARHKLGWTALMVASISHNESVVQVLL 187

Query: 141 EAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAG 200
            AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A 
Sbjct: 188 AAGADPNLGDEFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASFKGCTALHYAVLAD 247

Query: 201 NTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKY 260
           +  +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++
Sbjct: 248 DYSIVKELLDRGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRF 307

Query: 261 PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFY 320
           PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y
Sbjct: 308 PLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKY 367

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVD
Sbjct: 368 MHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVD 427

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S
Sbjct: 428 KAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMS 487

Query: 441 KR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSEL 498
           +     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL
Sbjct: 488 RNRIAENLGDVQMSD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSEL 546

Query: 499 HTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAA 558
             LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAA
Sbjct: 547 IQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAA 606

Query: 559 AHEKSVIGKGSFVRLYVQ 576
           A+E+ ++  G  +R+ V+
Sbjct: 607 AYEQDLLPGGCTLRITVE 624


>gi|301783551|ref|XP_002927187.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Ailuropoda melanoleuca]
          Length = 677

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/496 (61%), Positives = 391/496 (78%), Gaps = 6/496 (1%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAI+     V++LL AG
Sbjct: 132 SNKDAALMEAARANNVQEVSRLLSEGA-DVNARHRLGWTALMVAAISRNDSMVQILLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 250

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 251 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLE 310

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 311 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 370

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 371 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 430

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 431 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRN- 489

Query: 444 PSISKSQGS---NLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
             I+++ G    N  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  
Sbjct: 490 -RIAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQ 548

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAH 560
           LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+
Sbjct: 549 LVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAY 608

Query: 561 EKSVIGKGSFVRLYVQ 576
           E+ ++  G  +R+ V+
Sbjct: 609 EQDLLPGGCTLRITVE 624


>gi|354501326|ref|XP_003512743.1| PREDICTED: caseinolytic peptidase B protein homolog [Cricetulus
           griseus]
          Length = 677

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/495 (61%), Positives = 392/495 (79%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E++  +     DVN RH LGWT L VAAI+     V+VLL AG
Sbjct: 132 SNKDAALMEAARANNEQEVRRLLSEGA-DVNARHKLGWTALMVAAISRNDSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 250

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
           +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 251 IVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRFPLE 310

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 311 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 370

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 371 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 430

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 431 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNR 490

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 491 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 549

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 550 VNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYE 609

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 610 QDLLPGGCTLRITVE 624


>gi|307212388|gb|EFN88178.1| Caseinolytic peptidase B protein-like protein [Harpegnathos
           saltator]
          Length = 502

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 310/500 (62%), Positives = 383/500 (76%), Gaps = 5/500 (1%)

Query: 74  SLALTLLEC--QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAING 131
           S  L  + C     K+     AA+YG+  ELK  I N  ++VN RH LGWT L VAAING
Sbjct: 5   SFGLIAVSCDYSPYKEEKFLHAAQYGNVLELKKAIANG-VNVNSRHSLGWTALQVAAING 63

Query: 132 KVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFS 191
           + + +++LL+ GA+ N GD F  V+R + +K MN  EVL+KRE+EF+  LN   TF GF+
Sbjct: 64  QAEILKILLDNGADINAGDEFTNVNRLSTKKGMNFMEVLMKREEEFSSRLNNAATFQGFT 123

Query: 192 ALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQRE 251
           ALHY V+A +   V++LL  G DPT+++ +GH   +YA++  IK++L +Y  KY +L +E
Sbjct: 124 ALHYAVLADSKACVKILLDKGIDPTIENEAGHRAIEYAKE-EIKEMLTEYTIKYDELLKE 182

Query: 252 KEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKT 311
           KEAEERR++PLEQRLK  IVGQE  I+I+++ I+RKENGW D++HPLVFLFLGSSGIGKT
Sbjct: 183 KEAEERRRFPLEQRLKQHIVGQEGPISIVASTIRRKENGWIDEEHPLVFLFLGSSGIGKT 242

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAKQLA YIH++K  +FIRLDMSEYQEKHE AKLIGAPPGY+GHD GGQLTK LK+CP 
Sbjct: 243 ELAKQLAAYIHKNKTNSFIRLDMSEYQEKHEAAKLIGAPPGYIGHDSGGQLTKLLKQCPT 302

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECK+AIF+MTSNL + EIA+HA+Q
Sbjct: 303 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKEAIFIMTSNLGNKEIAEHAIQ 362

Query: 432 LRKEGEEFSK-RTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
           LR E  +  K R  + S        + ISR FKD VV+PILK HFRRDEFLGRINEIVYF
Sbjct: 363 LRAESAKLLKHRLENTSDEDQEPERIEISRKFKDQVVRPILKAHFRRDEFLGRINEIVYF 422

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
           LPFS++EL  LV REL  WA +A ++H I + WD +V ++LADGYDVHYGARSIK+EVER
Sbjct: 423 LPFSRAELLKLVTRELEAWATRAKERHMIELKWDREVLSVLADGYDVHYGARSIKYEVER 482

Query: 551 QVVSQLAAAHEKSVIGKGSF 570
           +VV+QLAAAHE+ +I   S 
Sbjct: 483 RVVNQLAAAHERGLISMHSL 502


>gi|74192958|dbj|BAE34982.1| unnamed protein product [Mus musculus]
          Length = 677

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 314/558 (56%), Positives = 417/558 (74%), Gaps = 10/558 (1%)

Query: 25  YKRGFQSSKLFYTTQSTQADFKSCLSVFPKIRQSNNTCMYNNLLFASACSLALTLLEC-- 82
           + R  + +++ Y T ++     S     P  + S N       L   A ++AL +++C  
Sbjct: 71  WGRRGERTEIPYLTAASSERGPSPEETLPG-QDSWNGVPNKTGLGMWALAMAL-VVQCYS 128

Query: 83  --QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLL 140
              S KD  L  AAR  + +E++  +     DVN RH LGWT L VA+I+     V+VLL
Sbjct: 129 KNPSNKDAALMEAARANNVQEVRRLLSEGA-DVNARHKLGWTALMVASISHNESVVQVLL 187

Query: 141 EAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAG 200
            AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A 
Sbjct: 188 AAGADPNLGDEFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASFKGCTALHYAVLAD 247

Query: 201 NTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKY 260
           +  +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++
Sbjct: 248 DYSIVKELLDRGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRF 307

Query: 261 PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFY 320
           PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y
Sbjct: 308 PLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKY 367

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVD
Sbjct: 368 MHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVD 427

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S
Sbjct: 428 KAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMS 487

Query: 441 KR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSEL 498
           +     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL
Sbjct: 488 RNRIAENLGDVQMSD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSEL 546

Query: 499 HTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAA 558
             LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAA
Sbjct: 547 IQLVNKELNFWAKRAKQRHNITLLWDREVADVLFDGYNVHYGARSIKHEVERRVVNQLAA 606

Query: 559 AHEKSVIGKGSFVRLYVQ 576
           A+E+ ++  G  +R+ V+
Sbjct: 607 AYEQDLLPGGCTLRITVE 624


>gi|417403825|gb|JAA48699.1| Putative caseinolytic peptidase b protein [Desmodus rotundus]
          Length = 676

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/496 (61%), Positives = 391/496 (78%), Gaps = 6/496 (1%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   + +   DVN RH LGWT L VAAI+     V+VLL AG
Sbjct: 131 SSKDAALLEAARTNNVQEVSRLLSDGA-DVNARHKLGWTALMVAAISRNYSVVQVLLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E  ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 190 ADPNLGDDFSSVYKTAKEHGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYH 249

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P +++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 250 TVKELLDGGANPLLRNEMGHTPLDYAREGEVMKLLRTSETKYQEKQRKREAEERRRFPLE 309

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQE+AI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 310 QRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 369

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 370 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 429

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S   
Sbjct: 430 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSHN- 488

Query: 444 PSISKSQGS---NLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
             I+++ G    N  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  
Sbjct: 489 -RIAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQ 547

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAH 560
           LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+
Sbjct: 548 LVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAY 607

Query: 561 EKSVIGKGSFVRLYVQ 576
           E+ ++  G  +R+ V+
Sbjct: 608 EQDLLPGGCTLRITVE 623


>gi|344257982|gb|EGW14086.1| Caseinolytic peptidase B protein-like [Cricetulus griseus]
          Length = 676

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/495 (61%), Positives = 392/495 (79%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E++  +     DVN RH LGWT L VAAI+     V+VLL AG
Sbjct: 131 SNKDAALMEAARANNEQEVRRLLSEGA-DVNARHKLGWTALMVAAISRNDSVVQVLLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 190 ADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 249

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
           +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 250 IVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRFPLE 309

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 310 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 369

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 370 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 429

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 430 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNR 489

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 490 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 548

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 549 VNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYE 608

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 609 QDLLPGGCTLRITVE 623


>gi|348523708|ref|XP_003449365.1| PREDICTED: caseinolytic peptidase B protein homolog [Oreochromis
           niloticus]
          Length = 641

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 304/508 (59%), Positives = 393/508 (77%), Gaps = 4/508 (0%)

Query: 71  SACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAIN 130
           SA ++A  L +    KD  L  AAR  +A+++   ++   +D N RH LGWT L VAA+N
Sbjct: 100 SAAAVAFCLKKDPDNKDDALLEAARTNNAQDVARLLKEG-VDPNHRHRLGWTALMVAAMN 158

Query: 131 GKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGF 190
            +   V+VLLEAGA+PN GD FN V+ T+ EK ++  EVL+ REDEF+  L+    F G 
Sbjct: 159 RQHSVVKVLLEAGADPNAGDHFNNVYDTSREKGIHSLEVLVSREDEFSSRLSSRAGFRGC 218

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           +ALHY  +A +   V +LL++GA+P   +  GH    YA++  +  +LQ++  K+ +LQ 
Sbjct: 219 TALHYATLADDPRAVRMLLEAGANPLQTNGVGHTARAYAKEGEVSTLLQEWEGKFLELQA 278

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGK 310
            +EAEERR++PLE+RLK+ I+GQE AIN +++AI+RKENGW D++HPLVFLFLGSSGIGK
Sbjct: 279 RREAEERRRFPLERRLKEHIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGK 338

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TELAKQ+A Y+H+D K+ FIR+DMSE+QEKHEVAK IG+PPGY+GH++GGQLTK L+ CP
Sbjct: 339 TELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKLLRACP 398

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL 430
           NAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTIECKDAIF+MTSN+AS+EIAQHAL
Sbjct: 399 NAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMTSNVASDEIAQHAL 458

Query: 431 QLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
           QLR+E E+ S+R    ++   Q S+ D+ ISR FK+ V++PILK HFRRDEFLGRINEIV
Sbjct: 459 QLRQEAEQVSRRKLADNLEDVQKSD-DIKISRQFKESVIRPILKAHFRRDEFLGRINEIV 517

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
           YFLPF  SEL  LV +ELNFWAKKA  +H+I + WD  V  +LA GY++HYGARSIKHEV
Sbjct: 518 YFLPFCHSELLQLVSKELNFWAKKAKQRHDITLQWDRPVLDLLAGGYNMHYGARSIKHEV 577

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           ER+VV+QLAAA+E+ ++ KG  +RL VQ
Sbjct: 578 ERRVVNQLAAAYEQELLPKGCTLRLSVQ 605


>gi|74188805|dbj|BAE28128.1| unnamed protein product [Mus musculus]
          Length = 598

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 305/511 (59%), Positives = 401/511 (78%), Gaps = 9/511 (1%)

Query: 72  ACSLALTLLEC----QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           A ++AL +++C     S KD  L  AAR  + +E++  +     DVN RH LGWT L VA
Sbjct: 38  ALAMAL-VVQCYSKNPSNKDAALMEAARANNVQEVRRLLSEGA-DVNARHKLGWTALMVA 95

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF 187
           +I+     V+V+L AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F
Sbjct: 96  SISHNESVVQVMLAAGADPNLGDEFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASF 155

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +  +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY +
Sbjct: 156 KGCTALHYAVLADDYSIVKELLDRGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYME 215

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 216 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 275

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 276 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLK 335

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 336 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 395

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRIN
Sbjct: 396 HALQLRQEALEMSRNRIAENLGDVQMSD-KITISKNFKENVIRPILKAHFRRDEFLGRIN 454

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 455 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 514

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 515 HEVERRVVNQLAAAYEQDLLPGGCTLRITVE 545


>gi|432892483|ref|XP_004075803.1| PREDICTED: caseinolytic peptidase B protein homolog [Oryzias
           latipes]
          Length = 675

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/490 (60%), Positives = 378/490 (77%), Gaps = 4/490 (0%)

Query: 89  TLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNL 148
            L   AR  +++++   ++   +D N RH LGWT L VAA+N +   V+VLLEAGANPN 
Sbjct: 152 ALLEGARTNNSEDVIRLLKEG-VDPNHRHRLGWTALMVAAMNRQHSVVKVLLEAGANPNA 210

Query: 149 GDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELL 208
           GD FN V+ T+ EK ++  EVL+ REDEF+  L+    F G +ALHY  +A +   V +L
Sbjct: 211 GDEFNNVYDTSREKGIHSLEVLVSREDEFSSRLSSRAGFRGCTALHYATLADDALAVRML 270

Query: 209 LKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKD 268
           L++GA+P   +  GH    YA++  +  +L ++  K+ +LQ  +EA ERRK+PLE+RLK+
Sbjct: 271 LEAGANPLQTNGLGHTARAYAKEGEVSTVLLEWEGKFKELQARREAAERRKFPLERRLKE 330

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEA 328
            I+GQE AIN +++AI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ+A Y+H+D K+ 
Sbjct: 331 HIIGQEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQVARYMHKDIKKG 390

Query: 329 FIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLT 388
           FIR+DMSE+QEKHEVAK IG+PPGY+GH++GGQLTK L+ CPNAVVLFDEVDKAHPDVLT
Sbjct: 391 FIRMDMSEFQEKHEVAKFIGSPPGYVGHEEGGQLTKLLRACPNAVVLFDEVDKAHPDVLT 450

Query: 389 VLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSI 446
           ++LQLFDEGRLTDGKGKTIECKDAIF+MTSN+AS EIAQHALQLR+E EE S+R    ++
Sbjct: 451 IMLQLFDEGRLTDGKGKTIECKDAIFIMTSNVASEEIAQHALQLRQEAEEVSRRKLADNL 510

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
              Q  + DV ISR FK+ V+QPILK HFRRDEFLGRINEIVYFLPF  SEL  LV +EL
Sbjct: 511 EDVQKGD-DVKISRQFKESVIQPILKAHFRRDEFLGRINEIVYFLPFCHSELLQLVGKEL 569

Query: 507 NFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
           +FWAKKA  +H+I + WD  V  +LA GY++HYGARSIKHEVER+VV+QLAAA+E+ ++ 
Sbjct: 570 SFWAKKAKQRHDITLQWDQPVLDLLAGGYNLHYGARSIKHEVERRVVNQLAAAYEQELLP 629

Query: 567 KGSFVRLYVQ 576
           KG  +RL V 
Sbjct: 630 KGCTLRLSVH 639


>gi|338727038|ref|XP_003365425.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Equus caballus]
          Length = 676

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 304/496 (61%), Positives = 391/496 (78%), Gaps = 6/496 (1%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E++  +     DVN RH LGWT L VAAI+     V+VLL AG
Sbjct: 131 SNKDAALMEAARANNVQEVRRLLSEGA-DVNARHRLGWTALMVAAISRNDSVVQVLLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 190 ADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHYAVLADDYR 249

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 250 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLE 309

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 310 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 369

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 370 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 429

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S   
Sbjct: 430 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSHN- 488

Query: 444 PSISKSQGS---NLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
             I+++ G    N  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  
Sbjct: 489 -RIAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQ 547

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAH 560
           LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+
Sbjct: 548 LVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAY 607

Query: 561 EKSVIGKGSFVRLYVQ 576
           E+ ++  G  +R+ V+
Sbjct: 608 EQDLLPGGCTLRITVE 623


>gi|397489412|ref|XP_003815722.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1 [Pan
           paniscus]
          Length = 677

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 306/512 (59%), Positives = 398/512 (77%), Gaps = 5/512 (0%)

Query: 68  LFASACSLALTLL-ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHV 126
           +FA A +L +    +  S KD  L  AAR  + +E+   +     DVN +H LGWT L V
Sbjct: 115 MFALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMV 173

Query: 127 AAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMT 186
           AAIN     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +
Sbjct: 174 AAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRAS 233

Query: 187 FLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYA 246
           F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY 
Sbjct: 234 FKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQ 293

Query: 247 DLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSS 306
           + QR++EAEERR++PLEQRL++ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSS
Sbjct: 294 EKQRKREAEERRRFPLEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSS 353

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           GIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+L
Sbjct: 354 GIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKL 413

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           K+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIA
Sbjct: 414 KQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIA 473

Query: 427 QHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRI 484
           QHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRI
Sbjct: 474 QHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRI 532

Query: 485 NEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSI 544
           NEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSI
Sbjct: 533 NEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSI 592

Query: 545 KHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           KHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 593 KHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 624


>gi|67969551|dbj|BAE01124.1| unnamed protein product [Macaca fascicularis]
          Length = 677

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/495 (61%), Positives = 390/495 (78%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN +H LGWT L VAAIN     V+VLL AG
Sbjct: 132 SNKDAALLEAARANNVQEVTRLLSEGA-DVNAKHRLGWTALMVAAINRNNSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHYAVLADDYR 250

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 251 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSETKYQEKQRKREAEERRRFPLE 310

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 311 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 370

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 371 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 430

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 431 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNR 490

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 491 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 549

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 550 VNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYE 609

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 610 QDLLPGGCTLRITVE 624


>gi|402894548|ref|XP_003910416.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Papio anubis]
          Length = 677

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/495 (61%), Positives = 390/495 (78%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN +H LGWT L VAAIN     V+VLL AG
Sbjct: 132 SNKDAALLEAARANNMQEVTRLLSEGA-DVNAKHRLGWTALMVAAINRNNSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHYAVLADDYR 250

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 251 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLE 310

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 311 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 370

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 371 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 430

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 431 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNR 490

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 491 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 549

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 550 VNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYE 609

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 610 QDLLPGGCTLRITVE 624


>gi|197098332|ref|NP_001127139.1| caseinolytic peptidase B protein homolog [Pongo abelii]
 gi|55725021|emb|CAH89378.1| hypothetical protein [Pongo abelii]
          Length = 677

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/495 (61%), Positives = 390/495 (78%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN +H LGWT L VAAIN     V+VLL AG
Sbjct: 132 SNKDAALLEAARANNTQEVSRLLSEGA-DVNAKHRLGWTALMVAAINRNNSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHYAVLADDYR 250

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 251 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLE 310

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 311 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 370

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 371 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 430

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 431 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNR 490

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 491 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 549

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 550 VNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYE 609

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 610 QDLLPGGCTLRITVE 624


>gi|348555397|ref|XP_003463510.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Cavia porcellus]
          Length = 674

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 301/495 (60%), Positives = 390/495 (78%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +EL   +     D+N RH LGWT L VAAIN     V++LL AG
Sbjct: 131 SDKDAALMEAARTNNIQELNRLLSQGA-DINARHRLGWTALMVAAINRNDSVVQILLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 190 ADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 249

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 250 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLE 309

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRL++ I+GQE+AI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 310 QRLREHIIGQENAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 369

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 370 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 429

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 430 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEISRNR 489

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 490 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 548

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 549 VNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYE 608

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 609 QDLLPGGCTLRITVE 623


>gi|62751534|ref|NP_001015625.1| caseinolytic peptidase B protein homolog [Bos taurus]
 gi|75070048|sp|Q5E9N5.1|CLPB_BOVIN RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
           Full=Suppressor of potassium transport defect 3
 gi|59858135|gb|AAX08902.1| suppressor of potassium transport defect 3 [Bos taurus]
 gi|74268281|gb|AAI03470.1| ClpB caseinolytic peptidase B homolog (E. coli) [Bos taurus]
 gi|296479834|tpg|DAA21949.1| TPA: caseinolytic peptidase B protein homolog [Bos taurus]
          Length = 677

 Score =  607 bits (1564), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 302/495 (61%), Positives = 390/495 (78%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAIN     V+VLL AG
Sbjct: 132 SSKDAALMEAARANNVQEVSRLLSEGA-DVNARHRLGWTALMVAAINRNDSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA ++ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 191 ADPNLGDDFSSVYKTAKDQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 250

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 251 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSETKYQEKQRKREAEERRRFPLE 310

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 311 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 370

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 371 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 430

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 431 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNR 490

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 491 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 549

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L +GY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 550 VNKELNFWAKRAKQRHNITLLWDREVADVLVEGYNVHYGARSIKHEVERRVVNQLAAAYE 609

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 610 QDLLPGGCTLRITVE 624


>gi|395814897|ref|XP_003780974.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Otolemur garnettii]
          Length = 677

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 302/495 (61%), Positives = 390/495 (78%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E++  +     DVN RH LGWT L VAAI+     V++LL AG
Sbjct: 132 SNKDAALLEAARANNVQEVRRLLSEGA-DVNARHRLGWTALMVAAISRNDSVVQILLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 250

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 251 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLE 310

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 311 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 370

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 371 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 430

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS EIAQHALQLR+E  E S+  
Sbjct: 431 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQHALQLRQEALEMSRNR 490

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 491 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 549

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 550 VNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYE 609

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 610 QDLLPGGCTLRITVE 624


>gi|426245077|ref|XP_004016341.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1 [Ovis
           aries]
          Length = 677

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 302/495 (61%), Positives = 390/495 (78%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAIN     V+VLL AG
Sbjct: 132 SSKDAALMEAARANNVQEVSRLLSEGA-DVNARHRLGWTALMVAAINRNDSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA ++ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 191 ADPNLGDDFSSVYKTAKDQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 250

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 251 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSETKYQEKQRKREAEERRRFPLE 310

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 311 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 370

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 371 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 430

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 431 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNR 490

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 491 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 549

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L +GY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 550 VNKELNFWAKRAKQRHNITLLWDREVADVLVEGYNVHYGARSIKHEVERRVVNQLAAAYE 609

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 610 QDLLPGGCTLRITVE 624


>gi|403262174|ref|XP_003923470.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 677

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 302/495 (61%), Positives = 391/495 (78%), Gaps = 4/495 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAIN     ++VLL AG
Sbjct: 132 SNKDAALMEAARANNPQEVSRLLSEGA-DVNARHRLGWTALMVAAINRNDSVIQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 250

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA + ++ ++L+    KY + QR++EAEERR++PLE
Sbjct: 251 TVKELLDGGANPLQRNEMGHTPLDYAREGDVMKLLRTSEAKYQEKQRKREAEERRRFPLE 310

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 311 QRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 370

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+L++CPNAVVLFDEVDKAH
Sbjct: 371 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQCPNAVVLFDEVDKAH 430

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR- 442
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+  
Sbjct: 431 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNR 490

Query: 443 -TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
              ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  L
Sbjct: 491 IAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQL 549

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E
Sbjct: 550 VNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYE 609

Query: 562 KSVIGKGSFVRLYVQ 576
           + ++  G  +R+ V+
Sbjct: 610 QDLLPGGCTLRITVE 624


>gi|410909810|ref|XP_003968383.1| PREDICTED: caseinolytic peptidase B protein homolog [Takifugu
           rubripes]
          Length = 660

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 295/527 (55%), Positives = 396/527 (75%), Gaps = 12/527 (2%)

Query: 57  QSNNTC--MYNNLLFASACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVN 114
           +S+ TC  +   +   +A ++A  L +    K   L  AA+  ++++++  ++    D N
Sbjct: 107 ESHETCRAVLAPVGLLTAAAVAFCLRKDSDNKGDALLEAAKTSNSEDVERLLKEGA-DPN 165

Query: 115 MRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKRE 174
            RH LGWT L VAA+N +   V+VLL+ GA+PN GD FN V+ T+ E+ ++  EVL+ RE
Sbjct: 166 HRHRLGWTALMVAAMNQQHGVVKVLLKKGADPNAGDEFNNVYETSRERGIHSLEVLVSRE 225

Query: 175 DEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANI 234
           DEF+  L+    F G +ALHY  +A +   V +LL++GA+P + +  GH    YA++ ++
Sbjct: 226 DEFSSRLSSRAGFRGCTALHYATLADDQHTVSMLLEAGANPMLTNGLGHTARAYAKEGDV 285

Query: 235 KQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDD 294
           K +L+++  K+ + Q ++E EERR++PLE+RLK+ IVGQE AIN +++AI+RK+NGW D+
Sbjct: 286 KTMLEEWEVKFQEAQAQRETEERRRFPLERRLKEHIVGQEGAINTVASAIRRKQNGWYDE 345

Query: 295 DHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYL 354
           +HPLVFLFLGSSGIGKTELAKQ+A Y+H+D K+ FIR+DMSE+QEKHEVAK IG+PPGY+
Sbjct: 346 EHPLVFLFLGSSGIGKTELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYV 405

Query: 355 GHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIF 414
           GH++GG LTK LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTIECKDA+F
Sbjct: 406 GHEEGGHLTKLLKECPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAVF 465

Query: 415 VMTSNLASNEIAQHALQLRKEGEEFSKRT-----PSISKSQGSNLDVTISRHFKDHVVQP 469
           +MTSN+AS+EIAQHAL LR+E E+ S R        I KS+G    + IS+ FK+ V+QP
Sbjct: 466 IMTSNVASDEIAQHALHLRQETEQVSHRKLADNLEEIQKSEG----IAISKQFKESVIQP 521

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ILK HFRRDEFLGRI EIVYFLPF  SEL  LV +EL+FWAKKA  +H+I + WD  V  
Sbjct: 522 ILKAHFRRDEFLGRITEIVYFLPFGHSELMQLVSKELSFWAKKAKQRHDITLQWDRPVLD 581

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           +LA GY++HYGARSIKHEVER+VV+QLAAA+E+ ++ KG  +RL VQ
Sbjct: 582 LLACGYNMHYGARSIKHEVERRVVNQLAAAYEQDLLPKGCTLRLSVQ 628


>gi|12621118|ref|NP_075236.1| caseinolytic peptidase B protein homolog [Rattus norvegicus]
 gi|25009257|sp|Q9WTT2.1|CLPB_RAT RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
           Full=Suppressor of potassium transport defect 3
 gi|4958935|dbj|BAA78095.1| SKD3 [Rattus norvegicus]
          Length = 677

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 313/557 (56%), Positives = 416/557 (74%), Gaps = 11/557 (1%)

Query: 26  KRGFQSSKLFYTTQSTQADFKSCLSVFPKIRQSNNTCMYNNLLFASACSLALTLLEC--- 82
           +RG + +++ Y T ++     S     P  + S N       L   A ++AL +++C   
Sbjct: 73  RRG-ERTEIPYLTAASSGRGPSPEETLPG-QDSWNGVPNKAGLGMWALAMAL-VVQCYNK 129

Query: 83  -QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLE 141
             S KD  L  AAR  + +E++  +     DVN RH LGWT L VAAI+     V+VLL 
Sbjct: 130 NPSNKDAALMEAARANNVQEVRRLLSEGA-DVNARHKLGWTALMVAAISHNESVVQVLLA 188

Query: 142 AGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGN 201
           AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +
Sbjct: 189 AGADPNLGDDFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRASFKGCTALHYAVLADD 248

Query: 202 TEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYP 261
             +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++P
Sbjct: 249 YSIVKELLGGGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKYMEKQRKREAEERRRFP 308

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYI 321
           LEQRL+  I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+
Sbjct: 309 LEQRLEQHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 368

Query: 322 HRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDK 381
           H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDK
Sbjct: 369 HKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDK 428

Query: 382 AHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSK 441
           AHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+
Sbjct: 429 AHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSR 488

Query: 442 R--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELH 499
                ++   Q S+  +TIS++FK+++++PILK HFRRDEFLGRINEIVYFLPF  SEL 
Sbjct: 489 NRIAENLGDVQISD-KITISKNFKENMIRPILKAHFRRDEFLGRINEIVYFLPFCHSELI 547

Query: 500 TLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
            LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+V YGARSIKHEVER+VV+QLAAA
Sbjct: 548 QLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVQYGARSIKHEVERRVVNQLAAA 607

Query: 560 HEKSVIGKGSFVRLYVQ 576
           +E+ ++  G  +R+ V+
Sbjct: 608 YEQDLLPGGCTLRITVE 624


>gi|321475126|gb|EFX86089.1| hypothetical protein DAPPUDRAFT_313073 [Daphnia pulex]
          Length = 587

 Score =  603 bits (1555), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 297/524 (56%), Positives = 395/524 (75%), Gaps = 3/524 (0%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           +I D  LFRAA+ G+A  ++   +N   D N RHPLGWTPLHVAA+ G VD V+VLL+ G
Sbjct: 46  TIYDHPLFRAAKKGNAIAVERLCKNGA-DPNQRHPLGWTPLHVAAVQGNVDVVKVLLKCG 104

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           ANP+LGD F+ V+  A EK ++   V+  RE+EF+D LN   TF G +ALHY  +  +  
Sbjct: 105 ANPDLGDDFSNVNLKAREKGLHWLGVMETREEEFSDRLNNRATFSGCTALHYACIIDDAA 164

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V  LL +GA+P++ +  GH P DYA    ++++L+ Y  KY D+ +E+ AEERRKYPLE
Sbjct: 165 CVAALLDAGANPSLANLGGHKPIDYANSDAMRELLESYIIKYEDMVKERAAEERRKYPLE 224

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
            RLK++I+GQE+AI  +++AI+RKE GW D++HPLVFLFLGSSGIGKTELAKQ++ Y++ 
Sbjct: 225 LRLKEKIIGQEAAIATVASAIRRKEGGWIDEEHPLVFLFLGSSGIGKTELAKQVSNYLNP 284

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
              E FIRLDMSEYQ KHEVAKLIG+PPGY+G+++GGQLTK+LKKCPNAVVL DEVDKAH
Sbjct: 285 KSSEGFIRLDMSEYQNKHEVAKLIGSPPGYVGYEEGGQLTKKLKKCPNAVVLLDEVDKAH 344

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSK-R 442
           PDVLTVLLQLFDEGR+TDG+GKTI CKDAIF+MTSNLA++EIA HALQLR E E  +K R
Sbjct: 345 PDVLTVLLQLFDEGRITDGRGKTIFCKDAIFIMTSNLANDEIADHALQLRHEAEVAAKQR 404

Query: 443 TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLV 502
           T +  +++  ++ + ISR F + +V+PILKRHF RDEFLGRINE V+F PFS++ELH LV
Sbjct: 405 TKNDKEAEMPSISLCISREFCEFIVRPILKRHFGRDEFLGRINEFVFFFPFSRNELHQLV 464

Query: 503 CRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            +EL+FWAKKA D++++++ WD  V   L  GY+V YGARS+K+EVER+VVS L+ + + 
Sbjct: 465 KKELDFWAKKAKDRYDVDLSWDGQVLDALCLGYNVAYGARSVKYEVEREVVSLLSNSQQF 524

Query: 563 SVIGKGSFVRLYVQWSKE-VSEDSAKGGIIKLKVKKKGMKDFID 605
               +G+ ++LYV +     S DSA+   I+L++K K   +F +
Sbjct: 525 HGFPRGALLQLYVDYGGNGSSTDSARNPQIRLRIKNKDSVEFTE 568


>gi|444731498|gb|ELW71851.1| Caseinolytic peptidase B protein like protein [Tupaia chinensis]
          Length = 677

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 308/530 (58%), Positives = 403/530 (76%), Gaps = 6/530 (1%)

Query: 51  VFPKIRQSNNTCMYNNL-LFASACSLALTLL-ECQSIKDLTLFRAARYGSAKELKTFIEN 108
            FP+    N       L ++A A +L +    +  S KD  L  AAR  + +E++  +  
Sbjct: 97  TFPEPDSWNGVPSRAGLGMWALAAALVVHCYSKSPSNKDAALMEAARANNVQEVRRLLSE 156

Query: 109 SKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFE 168
              DVN RH LGWT L VAAI+     V+VLL AGA+PNLGD F++V++TA E+ ++  E
Sbjct: 157 GA-DVNARHKLGWTALMVAAISRNDSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLE 215

Query: 169 VLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDY 228
           VL+ RED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH   DY
Sbjct: 216 VLVTREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTALDY 275

Query: 229 AEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKE 288
           A +  + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKE
Sbjct: 276 AREGEVMKLLKTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKE 335

Query: 289 NGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIG 348
           NGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG
Sbjct: 336 NGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIG 395

Query: 349 APPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIE 408
           +PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+
Sbjct: 396 SPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTID 455

Query: 409 CKDAIFVMTSNLASNEIAQHALQLRKEGEEFS--KRTPSISKSQGSNLDVTISRHFKDHV 466
           CKDAIF+MTSN+AS+EIA+HALQLR+E  E S  +   ++   Q S+  +TIS++FK++V
Sbjct: 456 CKDAIFIMTSNVASDEIAEHALQLRQEALEMSHNRIAENLGDVQISD-KITISKNFKENV 514

Query: 467 VQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID 526
           ++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +
Sbjct: 515 IRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDRE 574

Query: 527 VETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 575 VADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 624


>gi|427778767|gb|JAA54835.1| Putative caseinolytic peptidase b protein [Rhipicephalus
           pulchellus]
          Length = 647

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 307/564 (54%), Positives = 396/564 (70%), Gaps = 58/564 (10%)

Query: 90  LFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLG 149
           LFRAA+ G+A EL+  + +  +D N RH LGWTPLHVAAI+G  D V  LLEAGA+ + G
Sbjct: 77  LFRAAKLGNADELRRLLADKSVDPNCRHSLGWTPLHVAAISGHCDCVLALLEAGADIDAG 136

Query: 150 DLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLL 209
           D F+ V++ A EK+++  EVL+ REDEF++ L+   +F G +ALHY V+  +T++V+ LL
Sbjct: 137 DEFSNVYQMAREKQLHSLEVLVVREDEFSNRLSNRASFRGCTALHYAVLTDDTQLVKTLL 196

Query: 210 KSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDR 269
           + GADPT+ ++  H+P+DY+ +  ++++L++Y +++   ++++EAEERR++PLEQR+K  
Sbjct: 197 EKGADPTLANDQNHLPADYSRNPVMRKLLKEYTDEHIKKRKQREAEERRRFPLEQRVKQV 256

Query: 270 IVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIH------- 322
           IVGQE AI +++A I+RKE GW DD+HPLVFLFLGSSGIGKTELAKQ+A Y+H       
Sbjct: 257 IVGQEGAIALVAATIRRKELGWFDDEHPLVFLFLGSSGIGKTELAKQMAEYLHGGSTGRS 316

Query: 323 RDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKA 382
               + FIRLDMSEYQEKHEVAKLIG+PPGY+GHDDGGQLT+RL++CPNAVVL DEVDKA
Sbjct: 317 SSGGKGFIRLDMSEYQEKHEVAKLIGSPPGYVGHDDGGQLTQRLRECPNAVVLLDEVDKA 376

Query: 383 HPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR 442
           HPDVLTVLLQLFDEGRLTDGKGKT+ CKDAIFVMTSNLAS EIAQHA  LR++ E  + +
Sbjct: 377 HPDVLTVLLQLFDEGRLTDGKGKTVVCKDAIFVMTSNLASEEIAQHATDLRRDAELLALQ 436

Query: 443 TPSISKSQGSNLDVTISRHFKDHVVQP--------------------------------- 469
             S+  S  +  +V+I   FK+ VV+P                                 
Sbjct: 437 RQSLQPSSVAE-EVSIRSDFKERVVRPILKRHFRRDEFLGRINEIVYFLPFSRKELTVLV 495

Query: 470 --------ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI 521
                   ILKRHFRRDEFLGRINEIVYFLPFS+ EL  LV REL  W ++A DKH I +
Sbjct: 496 TRELEGXXILKRHFRRDEFLGRINEIVYFLPFSRKELTVLVTRELEGWTRRAKDKHGIEL 555

Query: 522 VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
            W+  V  +LADGY+VHYGARS+KHEVERQVV++LA AHEK ++  G  V L V      
Sbjct: 556 TWERRVVELLADGYNVHYGARSVKHEVERQVVNRLAEAHEKQLLDSGCAVHLVV------ 609

Query: 582 SEDSAKGGI--IKLKVKKKGMKDF 603
            EDS  GG   I L V+ K  ++ 
Sbjct: 610 -EDSDDGGPARIALLVRPKSHRNM 632


>gi|156408431|ref|XP_001641860.1| predicted protein [Nematostella vectensis]
 gi|156229000|gb|EDO49797.1| predicted protein [Nematostella vectensis]
          Length = 454

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 295/445 (66%), Positives = 355/445 (79%), Gaps = 6/445 (1%)

Query: 164 MNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGH 223
           M   EVL++RE  F+D LN    F GF+ LHY  ++ + E V LLL++GADPT+KD+SGH
Sbjct: 1   MRSLEVLIQRETYFSDQLNKGADFSGFTPLHYAALSDSYECVHLLLQAGADPTLKDDSGH 60

Query: 224 IPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAA 283
           +P  Y    NIKQ LQ+Y EKY  L+++KEAEERR+YPLEQRLK+ IVGQE  I ++S A
Sbjct: 61  LPISYCGKENIKQTLQEYTEKYEKLKKQKEAEERRRYPLEQRLKEHIVGQEGPILVVSGA 120

Query: 284 IKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEV 343
           I+RKENGW D+DHPLVFLFLGSSGIGKTELAKQ+A YIH+D K+ FIRLDMSEYQEKHEV
Sbjct: 121 IRRKENGWHDEDHPLVFLFLGSSGIGKTELAKQVAHYIHKDNKKGFIRLDMSEYQEKHEV 180

Query: 344 AKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGK 403
           AK+IGAPPGY+G+D GGQLTK+LK+CPNAVVLFDEVDKAHPDVLTV+LQLFDEGRLTDGK
Sbjct: 181 AKMIGAPPGYIGYDQGGQLTKKLKECPNAVVLFDEVDKAHPDVLTVMLQLFDEGRLTDGK 240

Query: 404 GKTIECKDAIFVMTSNLASNEIAQHALQLRKEGE-EFSKRTPSISKSQGSNLDVTISRHF 462
           GKTIECKDAIFVMTSNLASNEIA HAL+LRKE +   ++R    + S+     +TISR F
Sbjct: 241 GKTIECKDAIFVMTSNLASNEIANHALELRKEADMAAAQRQDDRAMSE----QITISRRF 296

Query: 463 KDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIV 522
           K+ VVQPILK +F+RDEFLGRINEIVYFLPFS+SEL  LV REL  W+K AL +H+I I 
Sbjct: 297 KEQVVQPILKYNFKRDEFLGRINEIVYFLPFSRSELIKLVSRELESWSKTALSRHDIRIT 356

Query: 523 WDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
           W+ DV  +LADGYDVHYGARSIKHEVER+VV+QLAAAHE+ +IG GS + L V +     
Sbjct: 357 WERDVLDVLADGYDVHYGARSIKHEVERRVVNQLAAAHERELIGSGSSLHLIVDYPDNTP 416

Query: 583 EDSAK-GGIIKLKVKKKGMKDFIDV 606
           ED      +I++++ + G +  IDV
Sbjct: 417 EDGKDISPVIRVQLLQDGSRRNIDV 441


>gi|119595266|gb|EAW74860.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_c
           [Homo sapiens]
          Length = 690

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 307/524 (58%), Positives = 397/524 (75%), Gaps = 22/524 (4%)

Query: 73  CSLALTLL-----ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           C+LA  L+     +  S KD  L  AAR  + +E+   +     DVN +H LGWT L VA
Sbjct: 116 CALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMVA 174

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF 187
           AIN     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F
Sbjct: 175 AINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASF 234

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY +
Sbjct: 235 KGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQE 294

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 295 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 354

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 355 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLK 414

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 415 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 474

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL-------------K 472
           HALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL             K
Sbjct: 475 HALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKVRGLSWHFLLEPK 533

Query: 473 RHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA 532
            HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L 
Sbjct: 534 AHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLV 593

Query: 533 DGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 594 DGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 637


>gi|426369657|ref|XP_004051801.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Gorilla gorilla gorilla]
          Length = 707

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 309/541 (57%), Positives = 397/541 (73%), Gaps = 39/541 (7%)

Query: 73  CSLALTLL-----ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           C+LA  L+     +  S KD  L  AAR  + +E+   +     DVN +H LGWT L VA
Sbjct: 116 CALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMVA 174

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFE------------------- 168
           AIN     V+VLL AGA+PNLGD F++V++TA E+ ++  E                   
Sbjct: 175 AINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASWHITNQWTSAL 234

Query: 169 -----------VLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTV 217
                      VL+ RED+FN+ LN   +F G +ALHY V+A +   V+ LL  GADP  
Sbjct: 235 EFRRWLGLPAGVLITREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGADPLQ 294

Query: 218 KDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAI 277
           ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI
Sbjct: 295 RNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAI 354

Query: 278 NIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEY 337
             + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+
Sbjct: 355 ATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEF 414

Query: 338 QEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEG 397
           QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEG
Sbjct: 415 QERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEG 474

Query: 398 RLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLD 455
           RLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  
Sbjct: 475 RLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-K 533

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
           +TIS++FKD+V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  
Sbjct: 534 ITISKNFKDNVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQ 593

Query: 516 KHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V
Sbjct: 594 RHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITV 653

Query: 576 Q 576
           +
Sbjct: 654 E 654


>gi|426245083|ref|XP_004016344.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 4 [Ovis
           aries]
          Length = 580

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 295/469 (62%), Positives = 379/469 (80%), Gaps = 3/469 (0%)

Query: 112 DVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLL 171
           DVN RH LGWT L VAAIN     V+VLL AGA+PNLGD F++V++TA ++ ++  EVL+
Sbjct: 62  DVNARHRLGWTALMVAAINRNDSVVQVLLAAGADPNLGDDFSSVYKTAKDQGIHSLEVLV 121

Query: 172 KREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAED 231
            RED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +
Sbjct: 122 TREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYARE 181

Query: 232 ANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGW 291
             + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW
Sbjct: 182 GEVMKLLRTSETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGW 241

Query: 292 TDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
            D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PP
Sbjct: 242 YDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPP 301

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKD
Sbjct: 302 GYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKD 361

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQP 469
           AIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++P
Sbjct: 362 AIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRP 420

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  
Sbjct: 421 ILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVAD 480

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           +L +GY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 481 VLVEGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 529


>gi|296217139|ref|XP_002754880.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
           [Callithrix jacchus]
          Length = 562

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 293/469 (62%), Positives = 379/469 (80%), Gaps = 3/469 (0%)

Query: 112 DVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLL 171
           DVN RH LGWT L VAAIN     ++VLL AGA+PNLGD F+++++TA E+ ++  EVL+
Sbjct: 44  DVNARHRLGWTALMVAAINRNYSVIQVLLAAGADPNLGDDFSSIYKTAKEQGIHSLEVLV 103

Query: 172 KREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAED 231
            RED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +
Sbjct: 104 TREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYARE 163

Query: 232 ANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGW 291
             + ++L+    K+ + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW
Sbjct: 164 GEVMKLLRTSEAKHQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGW 223

Query: 292 TDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
            D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PP
Sbjct: 224 YDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPP 283

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+GH++GGQLTK+L++CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKD
Sbjct: 284 GYVGHEEGGQLTKKLRQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKD 343

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQP 469
           AIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++P
Sbjct: 344 AIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRP 402

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  
Sbjct: 403 ILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVAD 462

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 463 VLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 511


>gi|226501824|ref|NP_001141154.1| uncharacterized protein LOC100273240 [Zea mays]
 gi|194702950|gb|ACF85559.1| unknown [Zea mays]
          Length = 707

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 316/587 (53%), Positives = 418/587 (71%), Gaps = 41/587 (6%)

Query: 26  KRGFQSSKLFYTTQSTQADFKSCLSVFPKIRQSNNTCMYNNLLFASACSLALTLLEC--- 82
           +RG + +++ Y T ++     S     P  + S N       L   A ++AL +++C   
Sbjct: 73  RRG-ERTEIPYLTAASSGRGPSPEETLPG-QDSWNGVPNKAGLGMWALAMAL-VVQCYNK 129

Query: 83  -QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLE 141
             S KD  L  AAR  + +E++  +     DVN RH LGWT L VAAI+     V+VLL 
Sbjct: 130 NPSNKDAALMEAARANNVQEVRRLLSEGA-DVNARHKLGWTALMVAAISHNESVVQVLLA 188

Query: 142 AGANPNLGDLFNTVHRTAAEKKMN------------------------------PFEVLL 171
           AGA+PNLGD F++V++TA E+ ++                              P  VL+
Sbjct: 189 AGADPNLGDDFSSVYKTANEQGVHSLEDGRQDCASWRITNQWTSALEFRRWLGVPVGVLV 248

Query: 172 KREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAED 231
            RED+FN+ LN   +F G +ALHY V+A +  +V+ LL  GA+P  ++  GH P DYA +
Sbjct: 249 TREDDFNNRLNHRASFKGCTALHYAVLADDYSIVKELLGGGANPLQRNEMGHTPLDYARE 308

Query: 232 ANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGW 291
             + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW
Sbjct: 309 GEVMKLLKTSETKYMEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGW 368

Query: 292 TDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
            D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PP
Sbjct: 369 YDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPP 428

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKD
Sbjct: 429 GYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKD 488

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQP 469
           AIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++P
Sbjct: 489 AIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRP 547

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  
Sbjct: 548 ILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVAD 607

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 608 VLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|345788349|ref|XP_861363.2| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
           [Canis lupus familiaris]
          Length = 713

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 304/526 (57%), Positives = 391/526 (74%), Gaps = 36/526 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD+ L  AAR  + +E+   +     DVN RH LGWT L VAAI+     VR+LL AG
Sbjct: 138 SNKDIALMEAARANNVQEVSRLLSEGA-DVNARHRLGWTALMVAAISRNDSVVRILLAAG 196

Query: 144 ANPNLGDLFNTVHRTAAEKKMN------------------------------PFEVLLKR 173
           A+PNLGD F++V++TA E+ ++                              P  VL+ R
Sbjct: 197 ADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASWRITNQWTSALDFRRWLGVPTGVLVTR 256

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 257 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 316

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 317 VMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 376

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 377 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 436

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 437 IGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 496

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGS---NLDVTISRHFKDHVVQPI 470
           F+MTSN+AS+EIAQHALQLR+E  E S     I+++ G    N  +TIS++FK++V++PI
Sbjct: 497 FIMTSNVASDEIAQHALQLRQEALEMSHN--RIAENLGDVQINDKITISKNFKENVIRPI 554

Query: 471 LKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI 530
           LK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +
Sbjct: 555 LKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADV 614

Query: 531 LADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 615 LVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 660


>gi|13540606|ref|NP_110440.1| caseinolytic peptidase B protein homolog isoform 1 [Homo sapiens]
 gi|25009267|sp|Q9H078.1|CLPB_HUMAN RecName: Full=Caseinolytic peptidase B protein homolog; AltName:
           Full=Suppressor of potassium transport defect 3
 gi|12053313|emb|CAB66843.1| hypothetical protein [Homo sapiens]
 gi|13623579|gb|AAH06404.1| ClpB caseinolytic peptidase B homolog (E. coli) [Homo sapiens]
 gi|119595264|gb|EAW74858.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_a
           [Homo sapiens]
 gi|157928554|gb|ABW03573.1| ClpB caseinolytic peptidase B homolog (E. coli) [synthetic
           construct]
 gi|157929202|gb|ABW03886.1| ClpB caseinolytic peptidase B homolog (E. coli) [synthetic
           construct]
          Length = 707

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/541 (56%), Positives = 397/541 (73%), Gaps = 39/541 (7%)

Query: 73  CSLALTLL-----ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           C+LA  L+     +  S KD  L  AAR  + +E+   +     DVN +H LGWT L VA
Sbjct: 116 CALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMVA 174

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFE------------------- 168
           AIN     V+VLL AGA+PNLGD F++V++TA E+ ++  E                   
Sbjct: 175 AINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASRHITNQWTSAL 234

Query: 169 -----------VLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTV 217
                      VL+ RED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  
Sbjct: 235 EFRRWLGLPAGVLITREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQ 294

Query: 218 KDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAI 277
           ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI
Sbjct: 295 RNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAI 354

Query: 278 NIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEY 337
             + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+
Sbjct: 355 ATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEF 414

Query: 338 QEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEG 397
           QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEG
Sbjct: 415 QERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEG 474

Query: 398 RLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLD 455
           RLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  
Sbjct: 475 RLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-K 533

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
           +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  
Sbjct: 534 ITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQ 593

Query: 516 KHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V
Sbjct: 594 RHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITV 653

Query: 576 Q 576
           +
Sbjct: 654 E 654


>gi|114639256|ref|XP_001174710.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3 [Pan
           troglodytes]
          Length = 707

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/541 (56%), Positives = 397/541 (73%), Gaps = 39/541 (7%)

Query: 73  CSLALTLL-----ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVA 127
           C+LA  L+     +  S KD  L  AAR  + +E+   +     DVN +H LGWT L VA
Sbjct: 116 CALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMVA 174

Query: 128 AINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFE------------------- 168
           AIN     V+VLL AGA+PNLGD F++V++TA E+ ++  E                   
Sbjct: 175 AINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASRHITNQWTSAL 234

Query: 169 -----------VLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTV 217
                      VL+ RED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  
Sbjct: 235 EFRRWLGLPAGVLITREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQ 294

Query: 218 KDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAI 277
           ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI
Sbjct: 295 RNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAI 354

Query: 278 NIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEY 337
             + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+
Sbjct: 355 ATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEF 414

Query: 338 QEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEG 397
           QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEG
Sbjct: 415 QERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEG 474

Query: 398 RLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLD 455
           RLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  
Sbjct: 475 RLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-K 533

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
           +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  
Sbjct: 534 ITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQ 593

Query: 516 KHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V
Sbjct: 594 RHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITV 653

Query: 576 Q 576
           +
Sbjct: 654 E 654


>gi|301783549|ref|XP_002927186.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Ailuropoda melanoleuca]
 gi|281340521|gb|EFB16105.1| hypothetical protein PANDA_016950 [Ailuropoda melanoleuca]
          Length = 707

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/526 (57%), Positives = 391/526 (74%), Gaps = 36/526 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAI+     V++LL AG
Sbjct: 132 SNKDAALMEAARANNVQEVSRLLSEGA-DVNARHRLGWTALMVAAISRNDSMVQILLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASWRITNQWTSALEFRRWLGVPTGVLVTR 250

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 251 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 310

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 311 VMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 370

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 371 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 430

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 431 IGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 490

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGS---NLDVTISRHFKDHVVQPI 470
           F+MTSN+AS+EIAQHALQLR+E  E S+    I+++ G    N  +TIS++FK++V++PI
Sbjct: 491 FIMTSNVASDEIAQHALQLRQEALEMSRN--RIAENLGDVQINDKITISKNFKENVIRPI 548

Query: 471 LKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI 530
           LK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +
Sbjct: 549 LKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADV 608

Query: 531 LADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 609 LVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|194213476|ref|XP_001917508.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Equus caballus]
          Length = 706

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/526 (57%), Positives = 391/526 (74%), Gaps = 36/526 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E++  +     DVN RH LGWT L VAAI+     V+VLL AG
Sbjct: 131 SNKDAALMEAARANNVQEVRRLLSEGA-DVNARHRLGWTALMVAAISRNDSVVQVLLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 190 ADPNLGDDFSSVYKTAKEQGIHSLEDGGQDDASWHITNQWTSALEFRRWLGVPTGVLITR 249

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 250 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 309

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 310 VMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 369

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 370 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 429

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 430 IGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 489

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGS---NLDVTISRHFKDHVVQPI 470
           F+MTSN+AS+EIAQHALQLR+E  E S     I+++ G    N  +TIS++FK++V++PI
Sbjct: 490 FIMTSNVASDEIAQHALQLRQEALEMSHN--RIAENLGDVQINDKITISKNFKENVIRPI 547

Query: 471 LKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI 530
           LK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +
Sbjct: 548 LKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADV 607

Query: 531 LADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 608 LVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 653


>gi|67970204|dbj|BAE01446.1| unnamed protein product [Macaca fascicularis]
          Length = 707

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/525 (57%), Positives = 390/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN +H LGWT L VAAIN     V+VLL AG
Sbjct: 132 SNKDAALLEAARANNVQEVTRLLSEGA-DVNAKHRLGWTALMVAAINRNNSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEDGRQDGASRHITNQWTSALEFRRWLGLPAGVLITR 250

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 251 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 310

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 311 VMKLLRTSETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 370

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 371 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 430

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 431 VGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 490

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 491 FIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPIL 549

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 550 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 609

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 610 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|397489414|ref|XP_003815723.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2 [Pan
           paniscus]
          Length = 707

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/542 (56%), Positives = 398/542 (73%), Gaps = 35/542 (6%)

Query: 68  LFASACSLALTLL-ECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHV 126
           +FA A +L +    +  S KD  L  AAR  + +E+   +     DVN +H LGWT L V
Sbjct: 115 MFALAAALVVHCYSKSPSNKDAALLEAARANNMQEVSRLLSEGA-DVNAKHRLGWTALMV 173

Query: 127 AAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFE------------------ 168
           AAIN     V+VLL AGA+PNLGD F++V++TA E+ ++  E                  
Sbjct: 174 AAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASRHITNQWTSA 233

Query: 169 ------------VLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPT 216
                       VL+ RED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P 
Sbjct: 234 LEFRRWLGLPAGVLITREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPL 293

Query: 217 VKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESA 276
            ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLEQRL++ I+GQESA
Sbjct: 294 QRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLREHIIGQESA 353

Query: 277 INIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSE 336
           I  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE
Sbjct: 354 IATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSE 413

Query: 337 YQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDE 396
           +QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDE
Sbjct: 414 FQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDE 473

Query: 397 GRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNL 454
           GRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+ 
Sbjct: 474 GRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD- 532

Query: 455 DVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKAL 514
            +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A 
Sbjct: 533 KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAK 592

Query: 515 DKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ 
Sbjct: 593 QRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRIT 652

Query: 575 VQ 576
           V+
Sbjct: 653 VE 654


>gi|386782123|ref|NP_001248231.1| caseinolytic peptidase B protein homolog [Macaca mulatta]
 gi|355566841|gb|EHH23220.1| Suppressor of potassium transport defect 3 [Macaca mulatta]
 gi|383421895|gb|AFH34161.1| caseinolytic peptidase B protein homolog [Macaca mulatta]
          Length = 707

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/525 (57%), Positives = 390/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN +H LGWT L VAAIN     V+VLL AG
Sbjct: 132 SNKDAALLEAARANNVQEVTRLLSEGA-DVNAKHRLGWTALMVAAINRNNSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEDGRQDGASRHITNQWTSALEFRRWLGLPAGVLITR 250

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 251 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 310

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 311 VMKLLRTSETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 370

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 371 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 430

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 431 VGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 490

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 491 FIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPIL 549

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 550 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 609

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 610 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|348555399|ref|XP_003463511.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Cavia porcellus]
          Length = 704

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 301/525 (57%), Positives = 390/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +EL   +     D+N RH LGWT L VAAIN     V++LL AG
Sbjct: 131 SDKDAALMEAARTNNIQELNRLLSQGA-DINARHRLGWTALMVAAINRNDSVVQILLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 190 ADPNLGDDFSSVYKTAKEQGIHSLEDGGLDGASWLITNQWTSALEFRRWLGVPTGVLVTR 249

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 250 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 309

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRL++ I+GQE+AI  + AAI+RKENGW D
Sbjct: 310 VMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLREHIIGQENAITTVGAAIRRKENGWYD 369

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 370 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 429

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 430 IGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 489

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 490 FIMTSNVASDEIAQHALQLRQEALEISRNRIAENLGDVQISD-KITISKNFKENVIRPIL 548

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 549 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 608

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 609 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 653


>gi|355752436|gb|EHH56556.1| Suppressor of potassium transport defect 3 [Macaca fascicularis]
          Length = 707

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/525 (57%), Positives = 390/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN +H LGWT L VAAIN     V+VLL AG
Sbjct: 132 SNKDAALLEAARANNVQEVTRLLSEGT-DVNAKHRLGWTALMVAAINRNNSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEDGRQDGASRHITNQWTSALEFRRWLGLPAGVLITR 250

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 251 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 310

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 311 VMKLLRTSETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 370

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 371 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 430

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 431 VGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 490

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 491 FIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPIL 549

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 550 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 609

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 610 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|402894550|ref|XP_003910417.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Papio anubis]
          Length = 707

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 303/525 (57%), Positives = 390/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN +H LGWT L VAAIN     V+VLL AG
Sbjct: 132 SNKDAALLEAARANNMQEVTRLLSEGA-DVNAKHRLGWTALMVAAINRNNSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEDGRQDGASRHITNQWTSALEFRRWLGLPAGVLITR 250

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 251 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 310

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 311 VMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 370

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 371 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 430

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 431 VGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 490

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 491 FIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPIL 549

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 550 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 609

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 610 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|440907877|gb|ELR57966.1| Caseinolytic peptidase B protein-like protein [Bos grunniens mutus]
          Length = 707

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 302/525 (57%), Positives = 391/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAIN     V+VLL AG
Sbjct: 132 SSKDAALMEAARANNVQEVSRLLSEGA-DVNARHRLGWTALMVAAINRNDSVVQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA ++ ++  E                              VL+ R
Sbjct: 191 ADPNLGDDFSSVYKTAKDQGIHSLEDGGQDDASWHITNQWTSALEFRRWLGVPTGVLVTR 250

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA + +
Sbjct: 251 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGD 310

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 311 VMKLLRTSETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 370

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 371 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 430

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 431 IGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 490

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 491 FIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPIL 549

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 550 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 609

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            +GY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 610 VEGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|395814899|ref|XP_003780975.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Otolemur garnettii]
          Length = 707

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 302/525 (57%), Positives = 390/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E++  +     DVN RH LGWT L VAAI+     V++LL AG
Sbjct: 132 SNKDAALLEAARANNVQEVRRLLSEGA-DVNARHRLGWTALMVAAISRNDSVVQILLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASWLITNQWTSALEFRRWLGLPAGVLVTR 250

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 251 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 310

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 311 VMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 370

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 371 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 430

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 431 VGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 490

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 491 FIMTSNVASEEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPIL 549

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 550 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 609

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 610 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|403262176|ref|XP_003923471.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 707

 Score =  590 bits (1520), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 302/525 (57%), Positives = 391/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAIN     ++VLL AG
Sbjct: 132 SNKDAALMEAARANNPQEVSRLLSEGA-DVNARHRLGWTALMVAAINRNDSVIQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMN------------------------------PFEVLLKR 173
           A+PNLGD F++V++TA E+ ++                              P  VL+ R
Sbjct: 191 ADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASWRITNQWTSALEFRKWLGLPAGVLVTR 250

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA + +
Sbjct: 251 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGD 310

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 311 VMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 370

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 371 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 430

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+L++CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 431 VGHEEGGQLTKKLRQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 490

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 491 FIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPIL 549

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 550 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 609

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 610 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|426245079|ref|XP_004016342.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2 [Ovis
           aries]
          Length = 707

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 313/577 (54%), Positives = 407/577 (70%), Gaps = 40/577 (6%)

Query: 36  YTTQSTQADFKSCLSVFPKIRQSNNTCMYNNLLFASACSLALTLLEC----QSIKDLTLF 91
           Y   +T     S     P  + S N  +    L   A + AL ++ C     S KD  L 
Sbjct: 82  YLAAATWGHLPSPEDTLPG-QDSWNGVLSRAGLGVWALATAL-VVHCYSKSPSSKDAALM 139

Query: 92  RAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDL 151
            AAR  + +E+   +     DVN RH LGWT L VAAIN     V+VLL AGA+PNLGD 
Sbjct: 140 EAARANNVQEVSRLLSEGA-DVNARHRLGWTALMVAAINRNDSVVQVLLAAGADPNLGDD 198

Query: 152 FNTVHRTAAEKKMNPFE------------------------------VLLKREDEFNDVL 181
           F++V++TA ++ ++  E                              VL+ RED+FN+ L
Sbjct: 199 FSSVYKTAKDQGIHSLEDGGQDDASWHITNQWTSALEFRRWLGVPTGVLVTREDDFNNRL 258

Query: 182 NPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKY 241
           N   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+  
Sbjct: 259 NNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTS 318

Query: 242 AEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFL 301
             KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFL
Sbjct: 319 ETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFL 378

Query: 302 FLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQ 361
           FLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQ
Sbjct: 379 FLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQ 438

Query: 362 LTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLA 421
           LTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+A
Sbjct: 439 LTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVA 498

Query: 422 SNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDE 479
           S+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDE
Sbjct: 499 SDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDE 557

Query: 480 FLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHY 539
           FLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L +GY+VHY
Sbjct: 558 FLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVEGYNVHY 617

Query: 540 GARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           GARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 618 GARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|291384328|ref|XP_002708761.1| PREDICTED: caseinolytic peptidase B [Oryctolagus cuniculus]
          Length = 706

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 301/525 (57%), Positives = 390/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAIN     V++LL AG
Sbjct: 131 SNKDAALMEAARANNVQEVSRLLSEGA-DVNARHKLGWTALMVAAINRNDSVVQILLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 190 ADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASWRVTNQWTSALEFRRWLGIPAGVLVTR 249

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P +++  GH   DYA +  
Sbjct: 250 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLLRNEMGHTALDYAREGE 309

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRL++ I+GQESAI  + AAI+RKENGW D
Sbjct: 310 VMKLLKTAETKYQEKQRKREAEERRRFPLEQRLREHIIGQESAITTVGAAIRRKENGWYD 369

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 370 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 429

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 430 IGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 489

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 490 FIMTSNVASDEIAQHALQLRQEALEMSRSRLAENLGDVQISD-KITISKNFKENVIRPIL 548

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 549 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 608

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 609 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 653


>gi|296217135|ref|XP_002754878.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Callithrix jacchus]
          Length = 707

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 300/525 (57%), Positives = 390/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAIN     ++VLL AG
Sbjct: 132 SNKDAALMEAARANNPQEVSRLLSEGA-DVNARHRLGWTALMVAAINRNYSVIQVLLAAG 190

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F+++++TA E+ ++  E                              VL+ R
Sbjct: 191 ADPNLGDDFSSIYKTAKEQGIHSLEDGGQDGASWRITNQWTSALEFRKWLGLPAGVLVTR 250

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 251 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 310

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    K+ + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D
Sbjct: 311 VMKLLRTSEAKHQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYD 370

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 371 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 430

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+L++CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 431 VGHEEGGQLTKKLRQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 490

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PIL
Sbjct: 491 FIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPIL 549

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 550 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 609

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 610 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 654


>gi|344296832|ref|XP_003420106.1| PREDICTED: caseinolytic peptidase B protein homolog [Loxodonta
           africana]
          Length = 706

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 301/525 (57%), Positives = 390/525 (74%), Gaps = 34/525 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAI+     V+VLL AG
Sbjct: 131 SNKDAALMEAARTNNVQEVSRLLSEGA-DVNARHKLGWTALMVAAISRNYSVVQVLLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMN------------------------------PFEVLLKR 173
           A+PNLGD F++V++T+ E+ ++                              P  VL+ R
Sbjct: 190 ADPNLGDDFSSVYKTSKEQGIHSLEDKGQDGACWRITNQWTSALAFRRWLGVPTGVLVTR 249

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 250 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 309

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQE+AI  + AAI+RKENGW D
Sbjct: 310 VMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQENAIATVGAAIRRKENGWYD 369

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 370 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 429

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 430 IGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 489

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFS--KRTPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           F+MTSN+AS+EIAQHALQLR+E  E S  +   ++   Q S+  +TIS++FK++V++PIL
Sbjct: 490 FIMTSNVASDEIAQHALQLRQEALELSHNRIAENLGDVQISD-KITISKNFKENVIRPIL 548

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           K HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L
Sbjct: 549 KAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVL 608

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 609 VDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 653


>gi|351698232|gb|EHB01151.1| Caseinolytic peptidase B protein-like protein [Heterocephalus
           glaber]
          Length = 726

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 299/547 (54%), Positives = 386/547 (70%), Gaps = 56/547 (10%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     D+N RH LGWT L VAAIN     V++LL AG
Sbjct: 131 SNKDAALMEAARTNNVQEVTRLLSEGA-DINARHKLGWTALMVAAINRNDSVVQILLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 190 ADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 249

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEK------------------- 244
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    K                   
Sbjct: 250 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKSLDLTLRLLGLPQSQKKMK 309

Query: 245 ----------------YA------DLQREKEAEERRK-----------YPLEQRLKDRIV 271
                           YA       L R  EA+ + K           +PLEQRL++ I+
Sbjct: 310 GANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLREHII 369

Query: 272 GQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIR
Sbjct: 370 GQESAITTVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIR 429

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++L
Sbjct: 430 LDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIML 489

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKS 449
           QLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   
Sbjct: 490 QLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDV 549

Query: 450 QGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFW 509
           Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFW
Sbjct: 550 QISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFW 608

Query: 510 AKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGS 569
           AK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G 
Sbjct: 609 AKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGC 668

Query: 570 FVRLYVQ 576
            +R+ V+
Sbjct: 669 TLRITVE 675


>gi|426369659|ref|XP_004051802.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
           [Gorilla gorilla gorilla]
          Length = 662

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 299/511 (58%), Positives = 383/511 (74%), Gaps = 33/511 (6%)

Query: 98  SAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHR 157
           S+ E    + +   DVN +H LGWT L VAAIN     V+VLL AGA+PNLGD F++V++
Sbjct: 100 SSSEWPLRLLSEGADVNAKHRLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYK 159

Query: 158 TAAEKKMNPFE------------------------------VLLKREDEFNDVLNPNMTF 187
           TA E+ ++  E                              VL+ RED+FN+ LN   +F
Sbjct: 160 TAKEQGIHSLEDGGQDGASWHITNQWTSALEFRRWLGLPAGVLITREDDFNNRLNNRASF 219

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +   V+ LL  GADP  ++  GH P DYA +  + ++L+    KY +
Sbjct: 220 KGCTALHYAVLADDYRTVKELLDGGADPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQE 279

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 280 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 339

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 340 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLK 399

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 400 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 459

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FKD+V++PILK HFRRDEFLGRIN
Sbjct: 460 HALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKDNVIRPILKAHFRRDEFLGRIN 518

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 519 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 578

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 579 HEVERRVVNQLAAAYEQDLLPGGCTLRITVE 609


>gi|449485970|ref|XP_002187730.2| PREDICTED: caseinolytic peptidase B protein homolog [Taeniopygia
           guttata]
          Length = 576

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 300/511 (58%), Positives = 385/511 (75%), Gaps = 10/511 (1%)

Query: 78  TLLECQSIKDLTLFRAARYGSAKELKTFIEN----SKL-----DVNMRHPLGWTPLHVAA 128
            LLE   I +++   ++R      L  F ++    S+L     DVN RH LGWT L VAA
Sbjct: 14  ALLEAARINNVSEVNSSRMLEVLSLYLFPDHISPLSRLLEEGADVNTRHRLGWTALMVAA 73

Query: 129 INGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFL 188
           I+     V+ LL+A A+PNLGD F++V+  A EK ++  EVL+ RED+FN+ LN    F 
Sbjct: 74  ISRNSSVVKALLKANADPNLGDDFSSVYEIAKEKGLHSLEVLVTREDDFNNRLNIRANFK 133

Query: 189 GFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADL 248
           G +ALHY V+A +   V+LLL +GA+P  K+  GH P DYA +  +  +L+    K+ + 
Sbjct: 134 GCTALHYAVLADDYLTVKLLLDAGANPLQKNEMGHTPLDYAREGEVMNLLRASEAKFQEE 193

Query: 249 QREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGI 308
            R +E EERR++PLEQRLK+ I+GQE+AI  + AAI+RKENGW D++HPLVFLFLGSS  
Sbjct: 194 LRRREVEERRRFPLEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSEK 253

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAKQ A YIH+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+L++
Sbjct: 254 GKTELAKQTAKYIHKDIKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQ 313

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
           CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS EIAQH
Sbjct: 314 CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQH 373

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLD-VTISRHFKDHVVQPILKRHFRRDEFLGRINEI 487
           ALQLR+E  E SK+  + +       D +TIS+ FK+ V++PILK HFRRDEFLGRINEI
Sbjct: 374 ALQLRQEAMEMSKKRIAENLEDVQITDKITISKQFKEKVIRPILKAHFRRDEFLGRINEI 433

Query: 488 VYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHE 547
           VYFLPF  SEL  LV +ELNFWAKKA  +HNI + WD +V  +LADGY++HYGARSIKHE
Sbjct: 434 VYFLPFCHSELIQLVNKELNFWAKKAKARHNITLQWDREVMDVLADGYNLHYGARSIKHE 493

Query: 548 VERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           VER+VV+QLAAA+E+ ++ +G  +R+ V+ S
Sbjct: 494 VERRVVNQLAAAYEQDLLPQGCTLRIIVEDS 524


>gi|385719198|ref|NP_001245323.1| caseinolytic peptidase B protein homolog isoform 4 [Homo sapiens]
          Length = 662

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 297/511 (58%), Positives = 383/511 (74%), Gaps = 33/511 (6%)

Query: 98  SAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHR 157
           S+ E    + +   DVN +H LGWT L VAAIN     V+VLL AGA+PNLGD F++V++
Sbjct: 100 SSSEWPLRLLSEGADVNAKHRLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYK 159

Query: 158 TAAEKKMNPFE------------------------------VLLKREDEFNDVLNPNMTF 187
           TA E+ ++  E                              VL+ RED+FN+ LN   +F
Sbjct: 160 TAKEQGIHSLEDGGQDGASRHITNQWTSALEFRRWLGLPAGVLITREDDFNNRLNNRASF 219

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY +
Sbjct: 220 KGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQE 279

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 280 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 339

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 340 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLK 399

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 400 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 459

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRIN
Sbjct: 460 HALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRIN 518

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 519 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 578

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 579 HEVERRVVNQLAAAYEQDLLPGGCTLRITVE 609


>gi|126327952|ref|XP_001369464.1| PREDICTED: caseinolytic peptidase B protein homolog [Monodelphis
           domestica]
          Length = 701

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 296/523 (56%), Positives = 384/523 (73%), Gaps = 34/523 (6%)

Query: 86  KDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGAN 145
           K+  L  AAR  + +E+   +     +VN RH LGWT L VAAI+     V+VLL AGA+
Sbjct: 128 KEAALLEAARTNNVQEVSRLLSEGA-NVNARHKLGWTALMVAAISRNYSVVQVLLAAGAD 186

Query: 146 PNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKRED 175
           PNLGD F++V++TA E+ ++  E                              VL+ RED
Sbjct: 187 PNLGDEFSSVYKTAKEQGVHSLEDRGKDNADSSISCQWTNALEFRRWLGTPTGVLVTRED 246

Query: 176 EFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIK 235
           +FN+ LN   +F G +ALHY  +A +   V+ L+  GA P   +  GH P DYA D  + 
Sbjct: 247 DFNNRLNNRASFRGCTALHYAALADDYRTVKELVDGGASPLQSNEMGHTPVDYARDGEVM 306

Query: 236 QILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDD 295
           ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++
Sbjct: 307 KLLKASETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEE 366

Query: 296 HPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLG 355
           HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+G
Sbjct: 367 HPLVFLFLGSSGIGKTELAKQTAKYMHKDGKKGFIRLDMSEFQERHEVAKFIGSPPGYIG 426

Query: 356 HDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFV 415
           H++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+
Sbjct: 427 HEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFI 486

Query: 416 MTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKR 473
           MTSN+AS EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK 
Sbjct: 487 MTSNVASEEIAQHALQLRQEALEMSRNRIAENLGDVQLSD-KITISKNFKENVIRPILKA 545

Query: 474 HFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD 533
           HFRRDEFLGRINEIVYFLPF  SEL  LV +EL FWAK+A  +H+I ++WD +V  +L D
Sbjct: 546 HFRRDEFLGRINEIVYFLPFCHSELIQLVNKELTFWAKRAKQRHDITLLWDREVADVLVD 605

Query: 534 GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           GY+VHYGARSI+HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 606 GYNVHYGARSIRHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 648


>gi|332211401|ref|XP_003254808.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Nomascus leucogenys]
          Length = 561

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 295/497 (59%), Positives = 378/497 (76%), Gaps = 33/497 (6%)

Query: 112 DVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFE--- 168
           DVN +H LGWT L VAAIN     V+VLL AGA+PNLGD F++V++TA E+ ++  E   
Sbjct: 13  DVNAKHRLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEDGG 72

Query: 169 ---------------------------VLLKREDEFNDVLNPNMTFLGFSALHYGVVAGN 201
                                      VL+ RED+FN+ LN   +F G +ALHY V+A +
Sbjct: 73  QDGASRHITNQWTSALEFRRWLGLPAGVLITREDDFNNRLNNRASFKGCTALHYAVLADD 132

Query: 202 TEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYP 261
              V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++P
Sbjct: 133 YRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFP 192

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYI 321
           LEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+
Sbjct: 193 LEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYM 252

Query: 322 HRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDK 381
           H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDK
Sbjct: 253 HKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDK 312

Query: 382 AHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSK 441
           AHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+
Sbjct: 313 AHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSR 372

Query: 442 R--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELH 499
                ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL 
Sbjct: 373 NRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELI 431

Query: 500 TLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
            LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA
Sbjct: 432 QLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAA 491

Query: 560 HEKSVIGKGSFVRLYVQ 576
           +E+ ++  G  +R+ V+
Sbjct: 492 YEQDLLPGGCTLRITVE 508


>gi|397489416|ref|XP_003815724.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3 [Pan
           paniscus]
          Length = 662

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 296/511 (57%), Positives = 383/511 (74%), Gaps = 33/511 (6%)

Query: 98  SAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHR 157
           S+ E    + +   DVN +H LGWT L VAAIN     V+VLL AGA+PNLGD F++V++
Sbjct: 100 SSSEWPLRLLSEGADVNAKHRLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYK 159

Query: 158 TAAEKKMNPFE------------------------------VLLKREDEFNDVLNPNMTF 187
           TA E+ ++  E                              VL+ RED+FN+ LN   +F
Sbjct: 160 TAKEQGIHSLEDGGQDGASRHITNQWTSALEFRRWLGLPAGVLITREDDFNNRLNNRASF 219

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY +
Sbjct: 220 KGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQE 279

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRL++ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 280 KQRKREAEERRRFPLEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 339

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 340 IGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLK 399

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 400 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 459

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRIN
Sbjct: 460 HALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRIN 518

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 519 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 578

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 579 HEVERRVVNQLAAAYEQDLLPGGCTLRITVE 609


>gi|194378722|dbj|BAG63526.1| unnamed protein product [Homo sapiens]
          Length = 506

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/455 (63%), Positives = 369/455 (81%), Gaps = 3/455 (0%)

Query: 126 VAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNM 185
           VAAIN     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   
Sbjct: 2   VAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRA 61

Query: 186 TFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKY 245
           +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY
Sbjct: 62  SFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKY 121

Query: 246 ADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGS 305
            + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGS
Sbjct: 122 QEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGS 181

Query: 306 SGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKR 365
           SGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+
Sbjct: 182 SGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKK 241

Query: 366 LKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEI 425
           LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EI
Sbjct: 242 LKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 301

Query: 426 AQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGR 483
           AQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGR
Sbjct: 302 AQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGR 360

Query: 484 INEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARS 543
           INEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARS
Sbjct: 361 INEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARS 420

Query: 544 IKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           IKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 421 IKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 455


>gi|332211399|ref|XP_003254807.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Nomascus leucogenys]
          Length = 506

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/455 (63%), Positives = 369/455 (81%), Gaps = 3/455 (0%)

Query: 126 VAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNM 185
           VAAIN     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   
Sbjct: 2   VAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRA 61

Query: 186 TFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKY 245
           +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY
Sbjct: 62  SFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKY 121

Query: 246 ADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGS 305
            + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGS
Sbjct: 122 QEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGS 181

Query: 306 SGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKR 365
           SGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+
Sbjct: 182 SGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKK 241

Query: 366 LKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEI 425
           LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EI
Sbjct: 242 LKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 301

Query: 426 AQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGR 483
           AQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGR
Sbjct: 302 AQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGR 360

Query: 484 INEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARS 543
           INEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARS
Sbjct: 361 INEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARS 420

Query: 544 IKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           IKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 421 IKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 455


>gi|397489420|ref|XP_003815726.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 5 [Pan
           paniscus]
          Length = 506

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/455 (62%), Positives = 369/455 (81%), Gaps = 3/455 (0%)

Query: 126 VAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNM 185
           VAAIN     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   
Sbjct: 2   VAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRA 61

Query: 186 TFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKY 245
           +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY
Sbjct: 62  SFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKY 121

Query: 246 ADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGS 305
            + QR++EAEERR++PLEQRL++ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGS
Sbjct: 122 QEKQRKREAEERRRFPLEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGS 181

Query: 306 SGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKR 365
           SGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+
Sbjct: 182 SGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKK 241

Query: 366 LKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEI 425
           LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EI
Sbjct: 242 LKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 301

Query: 426 AQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGR 483
           AQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGR
Sbjct: 302 AQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGR 360

Query: 484 INEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARS 543
           INEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARS
Sbjct: 361 INEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARS 420

Query: 544 IKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           IKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 421 IKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 455


>gi|345788351|ref|XP_003433059.1| PREDICTED: caseinolytic peptidase B protein homolog [Canis lupus
           familiaris]
          Length = 506

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 287/456 (62%), Positives = 369/456 (80%), Gaps = 5/456 (1%)

Query: 126 VAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNM 185
           VAAI+     VR+LL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   
Sbjct: 2   VAAISRNDSVVRILLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRA 61

Query: 186 TFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKY 245
           +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY
Sbjct: 62  SFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKY 121

Query: 246 ADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGS 305
            + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGS
Sbjct: 122 QEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGS 181

Query: 306 SGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKR 365
           SGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+
Sbjct: 182 SGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKK 241

Query: 366 LKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEI 425
           LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EI
Sbjct: 242 LKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 301

Query: 426 AQHALQLRKEGEEFSKRTPSISKSQGS---NLDVTISRHFKDHVVQPILKRHFRRDEFLG 482
           AQHALQLR+E  E S     I+++ G    N  +TIS++FK++V++PILK HFRRDEFLG
Sbjct: 302 AQHALQLRQEALEMSHN--RIAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLG 359

Query: 483 RINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGAR 542
           RINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGAR
Sbjct: 360 RINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGAR 419

Query: 543 SIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           SIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 420 SIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 455


>gi|194378588|dbj|BAG63459.1| unnamed protein product [Homo sapiens]
          Length = 662

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 295/511 (57%), Positives = 382/511 (74%), Gaps = 33/511 (6%)

Query: 98  SAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHR 157
           S+ E    + +   DVN +H LGWT L VAAIN     V+VLL AGA+PNLGD F++V++
Sbjct: 100 SSSEWPLRLLSEGADVNAKHRLGWTALMVAAINRNNSVVQVLLAAGADPNLGDDFSSVYK 159

Query: 158 TAAEKKMNPFE------------------------------VLLKREDEFNDVLNPNMTF 187
           TA E+ ++  E                              VL+ RED+FN+ LN   +F
Sbjct: 160 TAKEQGIHSLEDGGQDGASRHITNQWTSALEFRRWLGLPAGVLITREDDFNNRLNNRASF 219

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
            G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY +
Sbjct: 220 KGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQE 279

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
            QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSG
Sbjct: 280 KQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSG 339

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           IGKTELAKQ A Y+H+D K+ FIRLDMS++QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 340 IGKTELAKQTAKYMHKDAKKGFIRLDMSKFQERHEVAKFIGSPPGYVGHEEGGQLTKKLK 399

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 400 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 459

Query: 428 HALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           HALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRIN
Sbjct: 460 HALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRIN 518

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIK
Sbjct: 519 EIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIK 578

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           HEVER+VV+QLAAA+E+ ++  G  + + V+
Sbjct: 579 HEVERRVVNQLAAAYEQDLLPGGCTLCITVE 609


>gi|148684570|gb|EDL16517.1| ClpB caseinolytic peptidase B homolog (E. coli), isoform CRA_a [Mus
           musculus]
          Length = 506

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 285/455 (62%), Positives = 370/455 (81%), Gaps = 3/455 (0%)

Query: 126 VAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNM 185
           VA+I+     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   
Sbjct: 2   VASISHNESVVQVLLAAGADPNLGDEFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRA 61

Query: 186 TFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKY 245
           +F G +ALHY V+A +  +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY
Sbjct: 62  SFKGCTALHYAVLADDYSIVKELLDRGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKY 121

Query: 246 ADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGS 305
            + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGS
Sbjct: 122 MEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGS 181

Query: 306 SGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKR 365
           SGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+
Sbjct: 182 SGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKK 241

Query: 366 LKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEI 425
           LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EI
Sbjct: 242 LKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 301

Query: 426 AQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGR 483
           AQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGR
Sbjct: 302 AQHALQLRQEALEMSRNRIAENLGDVQMSD-KITISKNFKENVIRPILKAHFRRDEFLGR 360

Query: 484 INEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARS 543
           INEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARS
Sbjct: 361 INEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARS 420

Query: 544 IKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           IKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 421 IKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 455


>gi|426369661|ref|XP_004051803.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 4
           [Gorilla gorilla gorilla]
          Length = 648

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 283/443 (63%), Positives = 363/443 (81%), Gaps = 3/443 (0%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 154 VQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHY 213

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GADP  ++  GH P DYA +  + ++L+    KY + QR++EAE
Sbjct: 214 AVLADDYRTVKELLDGGADPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAE 273

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 274 ERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 333

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVL
Sbjct: 334 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVL 393

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E
Sbjct: 394 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 453

Query: 436 GEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
             E S+     ++   Q S+  +TIS++FKD+V++PILK HFRRDEFLGRINEIVYFLPF
Sbjct: 454 ALEMSRNRIAENLGDVQISD-KITISKNFKDNVIRPILKAHFRRDEFLGRINEIVYFLPF 512

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
             SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV
Sbjct: 513 CHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVV 572

Query: 554 SQLAAAHEKSVIGKGSFVRLYVQ 576
           +QLAAA+E+ ++  G  +R+ V+
Sbjct: 573 NQLAAAYEQDLLPGGCTLRITVE 595


>gi|149068723|gb|EDM18275.1| rCG39494, isoform CRA_b [Rattus norvegicus]
 gi|149068724|gb|EDM18276.1| rCG39494, isoform CRA_b [Rattus norvegicus]
          Length = 506

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/455 (62%), Positives = 370/455 (81%), Gaps = 3/455 (0%)

Query: 126 VAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNM 185
           VAAI+     V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   
Sbjct: 2   VAAISHNESVVQVLLAAGADPNLGDDFSSVYKTANEQGVHSLEVLVTREDDFNNRLNHRA 61

Query: 186 TFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKY 245
           +F G +ALHY V+A +  +V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY
Sbjct: 62  SFKGCTALHYAVLADDYSIVKELLGGGANPLQRNEMGHTPLDYAREGEVMKLLKTSETKY 121

Query: 246 ADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGS 305
            + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGS
Sbjct: 122 MEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGS 181

Query: 306 SGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKR 365
           SGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+
Sbjct: 182 SGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKK 241

Query: 366 LKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEI 425
           LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EI
Sbjct: 242 LKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEI 301

Query: 426 AQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGR 483
           AQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGR
Sbjct: 302 AQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGR 360

Query: 484 INEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARS 543
           INEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARS
Sbjct: 361 INEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARS 420

Query: 544 IKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           IKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 421 IKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 455


>gi|345788353|ref|XP_850367.2| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Canis lupus familiaris]
          Length = 654

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 282/444 (63%), Positives = 363/444 (81%), Gaps = 5/444 (1%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           VR+LL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 160 VRILLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHY 219

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAE
Sbjct: 220 AVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAE 279

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 280 ERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 339

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVL
Sbjct: 340 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVL 399

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E
Sbjct: 400 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 459

Query: 436 GEEFSKRTPSISKSQGS---NLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
             E S     I+++ G    N  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLP
Sbjct: 460 ALEMSHN--RIAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLP 517

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
           F  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+V
Sbjct: 518 FCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRV 577

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQ 576
           V+QLAAA+E+ ++  G  +R+ V+
Sbjct: 578 VNQLAAAYEQDLLPGGCTLRITVE 601


>gi|328723476|ref|XP_001943960.2| PREDICTED: caseinolytic peptidase B protein homolog [Acyrthosiphon
           pisum]
          Length = 589

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/583 (51%), Positives = 395/583 (67%), Gaps = 28/583 (4%)

Query: 3   RILVQR---RQLVLCILSNYFKQKPYKRGFQSSKLFYTTQSTQADFKSCLSVFPKIRQSN 59
           + LVQR   RQL   I S  ++  P  R    S +         D  +  SVFP  +   
Sbjct: 19  KYLVQRKICRQL--SIQSVKYENYPNVR---CSNIHVIGDCLPHDNNTTTSVFPSWK--- 70

Query: 60  NTCMYNNLLFASACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPL 119
                    +  A SL     + ++I DL        GSA+EL  F++++    N  H  
Sbjct: 71  ---------WLLAISLLYAGYDSENIFDLI-----NQGSAEELTRFLKDNSKAANKLHSF 116

Query: 120 GWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFND 179
           GW PLHVAA N K +++ VLL++GA+PNL D F+     A ++ ++P +VL  RE+ F  
Sbjct: 117 GWAPLHVAASNNKYEHLAVLLKSGADPNLSDGFSNCINVARKRNIHPSDVLSIRENHFMH 176

Query: 180 VLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQ 239
             N N TF GF+ALHY  +  N E +++L+  GADP +K  SGH P D   D  I ++L 
Sbjct: 177 NFNVNATFQGFTALHYAALLNNIESLKVLMDHGADPNLKSVSGHKPIDLVTDITIYELLA 236

Query: 240 KYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV 299
            Y +++  ++ +KEAE R+ +PLE RLK +I+GQE+AIN +S+AI+RKENGWTDD+HPLV
Sbjct: 237 DYEKEFELIKNKKEAEIRKNFPLELRLKQKIIGQENAINEVSSAIRRKENGWTDDEHPLV 296

Query: 300 FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDG 359
           FLFLGSSGIGKTELAKQ+A Y+H++ K+ FIRLDMSEYQEKHEVAK+IG+PPGY+G+DDG
Sbjct: 297 FLFLGSSGIGKTELAKQIASYLHKNNKDGFIRLDMSEYQEKHEVAKMIGSPPGYVGYDDG 356

Query: 360 GQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSN 419
           G LTK+L K PNAVVLFDEV+KAH D+LT+LLQLFDEGR+TDGKGKTI CK+AIFVMTSN
Sbjct: 357 GYLTKQLAKNPNAVVLFDEVEKAHTDILTILLQLFDEGRITDGKGKTIVCKNAIFVMTSN 416

Query: 420 LASNEIAQHALQLRKEGEE---FSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFR 476
           LAS EIA+HAL+LR E  +      R       +   +   IS+ FKD +V+PILK+HF+
Sbjct: 417 LASEEIAEHALELRNEQRQNKLIEDRLSDKKIEKHEEVVTFISKKFKDQIVKPILKKHFK 476

Query: 477 RDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYD 536
           RDEFLGRINE+VYFLPFS+ EL  +V REL +W + AL KH+I I WD  VE ++   YD
Sbjct: 477 RDEFLGRINEVVYFLPFSEMELKFIVQRELQYWQELALKKHSIQIEWDSAVEHVIIGAYD 536

Query: 537 VHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSK 579
           V+YGARSIKHEVER VVSQLA AHEK ++ K + V++    +K
Sbjct: 537 VNYGARSIKHEVERSVVSQLAKAHEKGLLKKNTVVKIEADITK 579


>gi|380014869|ref|XP_003691438.1| PREDICTED: caseinolytic peptidase B protein homolog [Apis florea]
          Length = 589

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 299/536 (55%), Positives = 383/536 (71%), Gaps = 34/536 (6%)

Query: 71  SACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAIN 130
           S   + +TL E ++ +D   FRA +YG+  ELK+ I+   +D+N RH LGWT LH+AAIN
Sbjct: 75  SGIGITITLCEAKNYRDKQFFRAVKYGNIPELKSIIKEG-IDINTRHLLGWTALHLAAIN 133

Query: 131 GKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGF 190
            + + V++LL+ GA+ N  D F  V+ +A EK ++  +VL+ RE+EF D LN   TF GF
Sbjct: 134 SQPEVVKLLLKYGADVNAQDEFINVYGSAIEKGLHTLDVLMIREEEFCDHLNSRATFKGF 193

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           + LHY V+A +   V+ LL++GADPT+K+ SGH   +YA+D  +K++L K A KY ++ +
Sbjct: 194 TPLHYAVLADSKACVQALLEAGADPTMKNESGHRAVEYAKDGELKEMLIKRAIKYDEIMK 253

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGK 310
           EKE EERR++PLEQRLK  IVGQ  AI+I+++ I+RKENGW D+ HPLVFLFLGSSGIGK
Sbjct: 254 EKEIEERRRFPLEQRLKQYIVGQAGAISIVASTIRRKENGWIDEKHPLVFLFLGSSGIGK 313

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TELAKQLA YIH++K+E FIRLDMSEYQEKHEVAKLIGAPPGY+GHDDGGQLTK L+KCP
Sbjct: 314 TELAKQLAAYIHKNKQEGFIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTKLLRKCP 373

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL 430
           NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGK                          +
Sbjct: 374 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGK--------------------------V 407

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
           QLR+E +   K+       +  +  + ISR FKD VV+PILK HF RDEFLGRINEIVYF
Sbjct: 408 QLREEAQRVEKKQDINCDVEEDSEQIEISRKFKDEVVRPILKAHFGRDEFLGRINEIVYF 467

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
           LPFS+SEL  LV +EL  WA +A  +H I + W+ +V ++LA+GYD HYGARSIK+EVER
Sbjct: 468 LPFSQSELIKLVAKELEAWADRAKKRHKIELKWNREVLSLLAEGYDTHYGARSIKYEVER 527

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKGMKDFIDV 606
           +VV+QLAAAHE+  +  G  V + V+W K        G  I L +++KG KDF+D+
Sbjct: 528 RVVNQLAAAHERGQLEIGCCVLVKVKWYK-------NGASIALSIRRKGAKDFVDL 576


>gi|410045552|ref|XP_003952017.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
           troglodytes]
          Length = 648

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/443 (63%), Positives = 363/443 (81%), Gaps = 3/443 (0%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 154 VQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHY 213

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAE
Sbjct: 214 AVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAE 273

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 274 ERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 333

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVL
Sbjct: 334 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVL 393

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E
Sbjct: 394 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 453

Query: 436 GEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
             E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF
Sbjct: 454 ALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPF 512

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
             SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV
Sbjct: 513 CHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVV 572

Query: 554 SQLAAAHEKSVIGKGSFVRLYVQ 576
           +QLAAA+E+ ++  G  +R+ V+
Sbjct: 573 NQLAAAYEQDLLPGGCTLRITVE 595


>gi|385719196|ref|NP_001245322.1| caseinolytic peptidase B protein homolog isoform 3 [Homo sapiens]
          Length = 648

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/443 (63%), Positives = 363/443 (81%), Gaps = 3/443 (0%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 154 VQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHY 213

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAE
Sbjct: 214 AVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAE 273

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 274 ERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 333

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVL
Sbjct: 334 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVL 393

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E
Sbjct: 394 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 453

Query: 436 GEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
             E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF
Sbjct: 454 ALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPF 512

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
             SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV
Sbjct: 513 CHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVV 572

Query: 554 SQLAAAHEKSVIGKGSFVRLYVQ 576
           +QLAAA+E+ ++  G  +R+ V+
Sbjct: 573 NQLAAAYEQDLLPGGCTLRITVE 595


>gi|402894552|ref|XP_003910418.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
           [Papio anubis]
          Length = 648

 Score =  574 bits (1479), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/443 (63%), Positives = 363/443 (81%), Gaps = 3/443 (0%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 154 VQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHY 213

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAE
Sbjct: 214 AVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAE 273

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 274 ERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 333

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVL
Sbjct: 334 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVL 393

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E
Sbjct: 394 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 453

Query: 436 GEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
             E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF
Sbjct: 454 ALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPF 512

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
             SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV
Sbjct: 513 CHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVV 572

Query: 554 SQLAAAHEKSVIGKGSFVRLYVQ 576
           +QLAAA+E+ ++  G  +R+ V+
Sbjct: 573 NQLAAAYEQDLLPGGCTLRITVE 595


>gi|397489418|ref|XP_003815725.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 4 [Pan
           paniscus]
          Length = 648

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 280/443 (63%), Positives = 363/443 (81%), Gaps = 3/443 (0%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 154 VQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHY 213

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAE
Sbjct: 214 AVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAE 273

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRL++ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 274 ERRRFPLEQRLREHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 333

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVL
Sbjct: 334 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVL 393

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E
Sbjct: 394 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 453

Query: 436 GEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
             E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF
Sbjct: 454 ALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPF 512

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
             SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV
Sbjct: 513 CHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVV 572

Query: 554 SQLAAAHEKSVIGKGSFVRLYVQ 576
           +QLAAA+E+ ++  G  +R+ V+
Sbjct: 573 NQLAAAYEQDLLPGGCTLRITVE 595


>gi|410972743|ref|XP_003992816.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Felis catus]
          Length = 675

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 291/496 (58%), Positives = 380/496 (76%), Gaps = 7/496 (1%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAI+     V+VLL AG
Sbjct: 131 SNKDAALMEAARTNNVQEVSRLLSEGA-DVNARHRLGWTALMVAAISRNDSVVQVLLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 190 ADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYR 249

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLE
Sbjct: 250 TVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLE 309

Query: 264 QRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR 323
           QRLK+ I+GQE+AI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+
Sbjct: 310 QRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHK 369

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAH
Sbjct: 370 DAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAH 429

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S   
Sbjct: 430 PDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSHN- 488

Query: 444 PSISKSQGS---NLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
             ++++ G    N  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF       
Sbjct: 489 -RLAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHXXXXX 547

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAH 560
                L+  + +A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+
Sbjct: 548 XXGTLLSDLS-QAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAY 606

Query: 561 EKSVIGKGSFVRLYVQ 576
           E+ ++  G  +R+ V+
Sbjct: 607 EQDLLPGGCTLRITVE 622


>gi|395521288|ref|XP_003764750.1| PREDICTED: caseinolytic peptidase B protein homolog [Sarcophilus
           harrisii]
          Length = 669

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 294/529 (55%), Positives = 385/529 (72%), Gaps = 42/529 (7%)

Query: 89  TLFRAARYGSAKELKTF---------IENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVL 139
            L  AAR  + +E+ +          + +  ++VN RH LGWT L VAAI+     V+VL
Sbjct: 89  ALLEAARTNNVQEVSSSALKPSVSFRLLSEGVNVNARHKLGWTALMVAAISRNYSVVQVL 148

Query: 140 LEAGANPNLGDLFNTVHRTAAEKKMN------------------------------PFEV 169
           L AGA+PNLGD F++V++TA E+ ++                              P  V
Sbjct: 149 LAAGADPNLGDEFSSVYKTAKEQGVHSLEDRGKDDASSNIPCQWTSALEFGRWLGAPIGV 208

Query: 170 LLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYA 229
           L+ RED+FN+ LN   +F G +ALHY  +A +   V+ L+  GA P   +  GH P DYA
Sbjct: 209 LVTREDDFNNRLNNRASFKGCTALHYAALADDYRTVKELVDGGASPLQCNEMGHTPVDYA 268

Query: 230 EDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKEN 289
            D  + ++L+    K+ + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKEN
Sbjct: 269 RDGEVLKLLKTSETKFQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKEN 328

Query: 290 GWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
           GW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+
Sbjct: 329 GWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDGKKGFIRLDMSEFQERHEVAKFIGS 388

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+C
Sbjct: 389 PPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDC 448

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVV 467
           KDAIF+MTSN+AS EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V+
Sbjct: 449 KDAIFIMTSNVASEEIAQHALQLRQEALELSRNRLAENLGDVQLSD-KITISKNFKENVI 507

Query: 468 QPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV 527
           +PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +EL FWAK+A  +H+I ++WD +V
Sbjct: 508 RPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELTFWAKRAKQRHDITLLWDREV 567

Query: 528 ETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
             +L DGY+VHYGARSI+HEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 568 ADVLVDGYNVHYGARSIRHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 616


>gi|395814901|ref|XP_003780976.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
           [Otolemur garnettii]
          Length = 648

 Score =  573 bits (1476), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 280/443 (63%), Positives = 362/443 (81%), Gaps = 3/443 (0%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           V++LL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 154 VQILLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHY 213

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAE
Sbjct: 214 AVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAE 273

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 274 ERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 333

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVL
Sbjct: 334 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVL 393

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS EIAQHALQLR+E
Sbjct: 394 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASEEIAQHALQLRQE 453

Query: 436 GEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
             E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF
Sbjct: 454 ALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPF 512

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
             SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV
Sbjct: 513 CHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVV 572

Query: 554 SQLAAAHEKSVIGKGSFVRLYVQ 576
           +QLAAA+E+ ++  G  +R+ V+
Sbjct: 573 NQLAAAYEQDLLPGGCTLRITVE 595


>gi|194378488|dbj|BAG63409.1| unnamed protein product [Homo sapiens]
          Length = 648

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 280/443 (63%), Positives = 363/443 (81%), Gaps = 3/443 (0%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           V+VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 154 VQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLITREDDFNNRLNNRASFKGCTALHY 213

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAE
Sbjct: 214 AVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAE 273

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 274 ERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 333

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVL
Sbjct: 334 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVL 393

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E
Sbjct: 394 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 453

Query: 436 GEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
             E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRI+EIVYFLPF
Sbjct: 454 ALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRISEIVYFLPF 512

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
             SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV
Sbjct: 513 CHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVV 572

Query: 554 SQLAAAHEKSVIGKGSFVRLYVQ 576
           +QLAAA+E+ ++  G  +R+ V+
Sbjct: 573 NQLAAAYEQDLLPGGCTLRITVE 595


>gi|403262178|ref|XP_003923472.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 648

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 279/443 (62%), Positives = 364/443 (82%), Gaps = 3/443 (0%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           ++VLL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 154 IQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHY 213

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+P  ++  GH P DYA + ++ ++L+    KY + QR++EAE
Sbjct: 214 AVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGDVMKLLRTSEAKYQEKQRKREAE 273

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 274 ERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 333

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+L++CPNAVVL
Sbjct: 334 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQCPNAVVL 393

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E
Sbjct: 394 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 453

Query: 436 GEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
             E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF
Sbjct: 454 ALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPF 512

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
             SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV
Sbjct: 513 CHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVV 572

Query: 554 SQLAAAHEKSVIGKGSFVRLYVQ 576
           +QLAAA+E+ ++  G  +R+ V+
Sbjct: 573 NQLAAAYEQDLLPGGCTLRITVE 595


>gi|296217137|ref|XP_002754879.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 2
           [Callithrix jacchus]
          Length = 648

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 277/443 (62%), Positives = 363/443 (81%), Gaps = 3/443 (0%)

Query: 136 VRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHY 195
           ++VLL AGA+PNLGD F+++++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY
Sbjct: 154 IQVLLAAGADPNLGDDFSSIYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHY 213

Query: 196 GVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
            V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    K+ + QR++EAE
Sbjct: 214 AVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKHQEKQRKREAE 273

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAK 315
           ERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAK
Sbjct: 274 ERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAK 333

Query: 316 QLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVL 375
           Q A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+L++CPNAVVL
Sbjct: 334 QTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLRQCPNAVVL 393

Query: 376 FDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE 435
           FDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E
Sbjct: 394 FDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQE 453

Query: 436 GEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
             E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF
Sbjct: 454 ALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPF 512

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
             SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV
Sbjct: 513 CHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVV 572

Query: 554 SQLAAAHEKSVIGKGSFVRLYVQ 576
           +QLAAA+E+ ++  G  +R+ V+
Sbjct: 573 NQLAAAYEQDLLPGGCTLRITVE 595


>gi|426245081|ref|XP_004016343.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3 [Ovis
           aries]
          Length = 648

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 277/440 (62%), Positives = 360/440 (81%), Gaps = 3/440 (0%)

Query: 139 LLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVV 198
           LL AGA+PNLGD F++V++TA ++ ++  EVL+ RED+FN+ LN   +F G +ALHY V+
Sbjct: 157 LLAAGADPNLGDDFSSVYKTAKDQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVL 216

Query: 199 AGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERR 258
           A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR
Sbjct: 217 ADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSETKYQEKQRKREAEERR 276

Query: 259 KYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLA 318
           ++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A
Sbjct: 277 RFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTA 336

Query: 319 FYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDE 378
            Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDE
Sbjct: 337 KYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDE 396

Query: 379 VDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEE 438
           VDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E
Sbjct: 397 VDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALE 456

Query: 439 FSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKS 496
            S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  S
Sbjct: 457 MSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHS 515

Query: 497 ELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQL 556
           EL  LV +ELNFWAK+A  +HNI ++WD +V  +L +GY+VHYGARSIKHEVER+VV+QL
Sbjct: 516 ELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVEGYNVHYGARSIKHEVERRVVNQL 575

Query: 557 AAAHEKSVIGKGSFVRLYVQ 576
           AAA+E+ ++  G  +R+ V+
Sbjct: 576 AAAYEQDLLPGGCTLRITVE 595


>gi|410045554|ref|XP_003952018.1| PREDICTED: caseinolytic peptidase B protein homolog [Pan
           troglodytes]
          Length = 536

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 286/483 (59%), Positives = 368/483 (76%), Gaps = 33/483 (6%)

Query: 126 VAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFE----------------- 168
           VAAIN     V+VLL AGA+PNLGD F++V++TA E+ ++  E                 
Sbjct: 2   VAAINRNNSVVQVLLAAGADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASRHITNQWTS 61

Query: 169 -------------VLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADP 215
                        VL+ RED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P
Sbjct: 62  ALEFRRWLGLPAGVLITREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANP 121

Query: 216 TVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQES 275
             ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQES
Sbjct: 122 LQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQES 181

Query: 276 AINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMS 335
           AI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMS
Sbjct: 182 AIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMS 241

Query: 336 EYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFD 395
           E+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFD
Sbjct: 242 EFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFD 301

Query: 396 EGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSN 453
           EGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+
Sbjct: 302 EGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD 361

Query: 454 LDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKA 513
             +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A
Sbjct: 362 -KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRA 420

Query: 514 LDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
             +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+
Sbjct: 421 KQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRI 480

Query: 574 YVQ 576
            V+
Sbjct: 481 TVE 483


>gi|327289429|ref|XP_003229427.1| PREDICTED: caseinolytic peptidase B protein homolog, partial
           [Anolis carolinensis]
          Length = 594

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 283/499 (56%), Positives = 365/499 (73%), Gaps = 34/499 (6%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S  + +L  AAR  +  E+   ++   + VN RH LGWT L VAAIN     V +LL AG
Sbjct: 17  SFPEDSLLEAARINNISEVDRLLKEG-VSVNSRHKLGWTALMVAAINRNTSVVTLLLAAG 75

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
           A+PNLGD F++V+ TA EK ++  EVL+ RED+FN+ LN   +F G +ALHY V+A +  
Sbjct: 76  ADPNLGDEFSSVYETAKEKGLHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVLADDYP 135

Query: 204 VVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLE 263
            V+LLL+ GA+P  ++  GH P DYA +  + ++L+  A K                   
Sbjct: 136 TVKLLLEGGANPLQRNEMGHTPMDYAREGEVTKLLKASATK------------------- 176

Query: 264 QRLKDRIVG-QESAINIIS-----AAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQL 317
                  VG  +  + ++S     +AI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ 
Sbjct: 177 -------VGLAKDGLFVVSGYTKHSAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQT 229

Query: 318 AFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFD 377
           A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFD
Sbjct: 230 AKYLHKDVKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFD 289

Query: 378 EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGE 437
           EVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  
Sbjct: 290 EVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEAM 349

Query: 438 EFSKRTPSISKSQGSNLD-VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKS 496
           E S++  +         D +TIS+HFK+ V++PILK HFRRDEFLGRINEIVYFLPF  S
Sbjct: 350 EMSRKRIAEKLDDVQMTDKITISKHFKEKVIRPILKGHFRRDEFLGRINEIVYFLPFCHS 409

Query: 497 ELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQL 556
           EL  LV +EL+FWAKKA  +HNI +VWD +V  +LADGY++HYGARSIKHEVER+VV+QL
Sbjct: 410 ELIQLVNKELSFWAKKAKARHNITLVWDREVMDVLADGYNLHYGARSIKHEVERRVVNQL 469

Query: 557 AAAHEKSVIGKGSFVRLYV 575
           AAA+E+ ++ +G  +R+ V
Sbjct: 470 AAAYEQELLPRGCTLRIAV 488


>gi|449676249|ref|XP_002157935.2| PREDICTED: caseinolytic peptidase B protein homolog [Hydra
           magnipapillata]
          Length = 527

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 283/500 (56%), Positives = 372/500 (74%), Gaps = 7/500 (1%)

Query: 105 FIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKM 164
            I+NSK DVN +HPLGWT LH AA+ G    V++LL+AGA+P+  D F+T ++ A+   +
Sbjct: 15  LIKNSK-DVNKKHPLGWTALHSAAMAGNARAVKMLLDAGADPDALDDFSTAYKIASRHGL 73

Query: 165 NPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHI 224
             F+V+  R+  FN   N    F GF+ LHY  +A + E + LLL++GADPT+KD S H 
Sbjct: 74  RVFDVIDSRQSCFNRTTNNRADFSGFTPLHYACLADDYETICLLLEAGADPTIKDKSNHF 133

Query: 225 PSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAI 284
             +Y    + K +++KY EK+ + Q   E+EERR+YPLEQR ++ IVGQ+ AI  +S+AI
Sbjct: 134 AYEYVYKESNKNLIKKYQEKFNEKQALLESEERRRYPLEQRFREVIVGQQGAIQAVSSAI 193

Query: 285 KRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVA 344
           +R++NGW DD HPLVFLFLGSSGIGKTELAKQLA ++H+D +++FIRLDMSEYQEKHEV+
Sbjct: 194 RRRQNGWVDDQHPLVFLFLGSSGIGKTELAKQLARFLHKDVEKSFIRLDMSEYQEKHEVS 253

Query: 345 KLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKG 404
           KLIG+PPGY+G++ GGQLT +LK  P AVVLFDEV+KAHPDVLTV+LQLFDEGRLTDG G
Sbjct: 254 KLIGSPPGYVGYEQGGQLTTKLKAFPKAVVLFDEVEKAHPDVLTVMLQLFDEGRLTDGHG 313

Query: 405 KTIECKDAIFVMTSNLASNEIAQHALQLRKEGEE--FSKRTPSISKSQGSNLDVTISRHF 462
           KT+ECKDAIFVMTSNLAS EIA HAL+LR+  +E   +K    IS+ +     + I ++F
Sbjct: 314 KTVECKDAIFVMTSNLASEEIADHALELRQMAKENKVNKLGHDISEDEHQ---IQIGQNF 370

Query: 463 KDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIV 522
           K++ + PILK HFRRDEFLGRI E V+FLPFSK EL  LV +EL FW++ A  KH+I + 
Sbjct: 371 KENTIYPILKYHFRRDEFLGRITEFVFFLPFSKQELLKLVEKELLFWSQIAKKKHSIELS 430

Query: 523 WDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
           W+ DV  +LADGY++HYGARSIKHEVER+V++QLAAAHE+ +I K + VRL   + K  +
Sbjct: 431 WETDVLEVLADGYNIHYGARSIKHEVERRVINQLAAAHERKLITKNNIVRLKTMYPKVEN 490

Query: 583 ED-SAKGGIIKLKVKKKGMK 601
           +D +     IKL+V    +K
Sbjct: 491 DDITVLKPTIKLEVTDSNLK 510


>gi|198422963|ref|XP_002129983.1| PREDICTED: similar to Caseinolytic peptidase B protein homolog
           (Suppressor of potassium transport defect 3) [Ciona
           intestinalis]
          Length = 644

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 293/552 (53%), Positives = 388/552 (70%), Gaps = 30/552 (5%)

Query: 63  MYNNLLFASACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDV-NMRHPLGW 121
           M N+LL A++ S    L+E + I               E+K   E  K  V N RH LGW
Sbjct: 95  MGNSLLLAASRS---NLVEVRRI-------------LAEVKGLSETDKSKVLNKRHKLGW 138

Query: 122 TPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVL 181
           T L V+A+ G    V  LL AGA+PNLGD+FN   RT   + +   E  + RE EF+ +L
Sbjct: 139 TALMVSAMGGISHIVEELLVAGADPNLGDVFNA--RTV--RSLPQVEARMIREQEFSGLL 194

Query: 182 NPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYA--EDANIKQILQ 239
            P   F GF+ALHY VVA + E V++L+K G DPT K++ GH P +Y+  ++ +I + L 
Sbjct: 195 YPGADFRGFTALHYAVVADSVETVKVLVKYGTDPTKKNHMGHTPDEYSVSDNGDIAKFLA 254

Query: 240 KYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV 299
               +    ++ +EA ER  YPLE+RLK+ IVGQ+ AIN +++AI+RK+NGW D+DHPLV
Sbjct: 255 GAKVQAEQNRKLEEARERTLYPLERRLKENIVGQDGAINCVASAIRRKQNGWYDEDHPLV 314

Query: 300 FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDG 359
           FLFLGSSGIGKTELAKQ+A Y+H+D K+ FIRLDMSEYQEKHEVAKLIG+PPGY+GH+ G
Sbjct: 315 FLFLGSSGIGKTELAKQVANYLHKDNKKGFIRLDMSEYQEKHEVAKLIGSPPGYIGHEQG 374

Query: 360 GQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSN 419
           GQLTK+LK  PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDG+GKTI+CKDA+FVMTSN
Sbjct: 375 GQLTKKLKAMPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGRGKTIDCKDAVFVMTSN 434

Query: 420 LASNEIAQHALQLRKEGEEFSKRTPSI------SKSQGSNLDVTISRHFKDHVVQPILKR 473
           LA++EIA++  +LR E +E  K+  +       ++++ S+    +SR FK+ VV+PILKR
Sbjct: 435 LAADEIAEYGARLRYEAKETRKKKLATAPNSIDAQNESSDESAVVSRQFKESVVRPILKR 494

Query: 474 HFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILA 532
           HF RDEFLGRINE VYFLPFS+ EL  LV +E+  W K A ++H I++ W   +VETI+A
Sbjct: 495 HFGRDEFLGRINEFVYFLPFSEDELFLLVEKEMQLWKKHAKNRHGIDLYWKSPEVETIVA 554

Query: 533 DGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIK 592
           DGY++HYGARSIK+EV+R+VV+ LAAAHE+ ++ KG  V +      +  +DS     ++
Sbjct: 555 DGYNIHYGARSIKYEVDRRVVALLAAAHERGLLQKGCSVTVQNSVPVQSLQDSLNKCRLQ 614

Query: 593 LKVKKKGMKDFI 604
           LK++ +  K  +
Sbjct: 615 LKIQGQNSKPLL 626


>gi|410972745|ref|XP_003992817.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 3
           [Felis catus]
          Length = 705

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 291/526 (55%), Positives = 380/526 (72%), Gaps = 37/526 (7%)

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
           S KD  L  AAR  + +E+   +     DVN RH LGWT L VAAI+     V+VLL AG
Sbjct: 131 SNKDAALMEAARTNNVQEVSRLLSEGA-DVNARHRLGWTALMVAAISRNDSVVQVLLAAG 189

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFE------------------------------VLLKR 173
           A+PNLGD F++V++TA E+ ++  E                              VL+ R
Sbjct: 190 ADPNLGDDFSSVYKTAKEQGIHSLEDGGQDGASWRITNQWTSALEFRRWLGVPTGVLVTR 249

Query: 174 EDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDAN 233
           ED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA +  
Sbjct: 250 EDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGE 309

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQE+AI  + AAI+RKENGW D
Sbjct: 310 VMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQENAIATVGAAIRRKENGWYD 369

Query: 294 DDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGY 353
           ++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY
Sbjct: 370 EEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGY 429

Query: 354 LGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAI 413
           +GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAI
Sbjct: 430 IGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAI 489

Query: 414 FVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGS---NLDVTISRHFKDHVVQPI 470
           F+MTSN+AS+EIAQHALQLR+E  E S     ++++ G    N  +TIS++FK++V++PI
Sbjct: 490 FIMTSNVASDEIAQHALQLRQEALEMSHN--RLAENLGDVQINDKITISKNFKENVIRPI 547

Query: 471 LKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI 530
           LK HFRRDEFLGRINEIVYFLPF            L+  + +A  +HNI ++WD +V  +
Sbjct: 548 LKAHFRRDEFLGRINEIVYFLPFCHXXXXXXXGTLLSDLS-QAKQRHNITLLWDREVADV 606

Query: 531 LADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+
Sbjct: 607 LVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVE 652


>gi|357613731|gb|EHJ68690.1| hypothetical protein KGM_13300 [Danaus plexippus]
          Length = 612

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 295/562 (52%), Positives = 384/562 (68%), Gaps = 46/562 (8%)

Query: 71  SACSLALTLLECQSI-KDLTLFRAARYGSAKELKTFIENSKLD-------------VNMR 116
           SA ++ L L+    +  +   F+AA+ G+ +EL+  +E  + D              N R
Sbjct: 48  SAAAVGLALIAADYVFNERNFFKAAKVGNVQELRKQLEGVRDDRQNSGGGGGEGGAANRR 107

Query: 117 HPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDE 176
           H LGWT L VAA N +   VR LL  GA P++ + +     TA    ++P EV+ +REDE
Sbjct: 108 HSLGWTALMVAAANDQPAAVRELLRLGARPDMRERYAGASATANGAGLHPLEVMQRREDE 167

Query: 177 FNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAED-ANIK 235
           F   +N   +FLG++ALHY  +A +    + LL++GADPTV+D++G     YA D +  +
Sbjct: 168 FCSAMNARASFLGWTALHYAALADSPNTAKALLEAGADPTVRDHAGRRALHYARDPSTTR 227

Query: 236 QILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDD 295
            ++ ++ +++ +    + AEERR++PLEQRLK  IVGQ +AI  ++AA++RKENGW D++
Sbjct: 228 NLIMEHMKQWEEKAAAEAAEERRRFPLEQRLKQYIVGQSAAIETVAAAVRRKENGWADEE 287

Query: 296 HPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLG 355
           HPLVFLFLGSSGIGKTELAKQLA Y+HRD   AFIRLDMSEYQEKHEVAKLIGAPPGY+G
Sbjct: 288 HPLVFLFLGSSGIGKTELAKQLARYMHRDDPAAFIRLDMSEYQEKHEVAKLIGAPPGYVG 347

Query: 356 HDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFV 415
           H++GGQLT+ L +  +AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGK IECK+AIFV
Sbjct: 348 HEEGGQLTRALARRADAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKLIECKNAIFV 407

Query: 416 MTSNLASNEIAQHALQLRKEGEEFS-KRTPSISKSQG---SNLDVT-------------- 457
           MTSNLA++EIAQ+ LQLR+E E  S +R   I+ +     + +DV+              
Sbjct: 408 MTSNLAADEIAQYGLQLRREAEARSAQRVRPITTTANESKTEVDVSSEREGEPVGEAEEA 467

Query: 458 --ISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
             +SR FKD VV+PILKRHF RDEFLGRINEIVYFLPFS+ EL TLV  EL  WA+KA  
Sbjct: 468 LQVSRKFKDTVVRPILKRHFGRDEFLGRINEIVYFLPFSRQELLTLVHMELKAWAEKARA 527

Query: 516 KHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           +H + + W+  V   LADGYDVHYGARSIKHEVER+VV+QLA A E+  + +G  V L  
Sbjct: 528 RHAVELRWEGGVLGALADGYDVHYGARSIKHEVERRVVNQLALAAERGAVARGCGVLL-- 585

Query: 576 QWSKEVSEDSAKGGIIKLKVKK 597
                    SA+ G ++L V++
Sbjct: 586 ---------SARAGRLQLAVRR 598


>gi|196012549|ref|XP_002116137.1| hypothetical protein TRIADDRAFT_60107 [Trichoplax adhaerens]
 gi|190581460|gb|EDV21537.1| hypothetical protein TRIADDRAFT_60107 [Trichoplax adhaerens]
          Length = 613

 Score =  540 bits (1391), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 272/527 (51%), Positives = 373/527 (70%), Gaps = 25/527 (4%)

Query: 77  LTLLECQ---SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKV 133
           L+++ C    S + + L  AA+      LK  I+N   DVN RHPLGWT L  A  NG  
Sbjct: 85  LSIIPCSKTDSGEIIKLCYAAKVNDITILKRLIQNGT-DVNQRHPLGWTALQCATANGCQ 143

Query: 134 DNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSAL 193
           + V+VLL+AGA+ + GD ++T  R A +K ++ + V+ KRE EFN  L PN    GF+AL
Sbjct: 144 EAVKVLLDAGADVDAGDFYSTPFRIAQQKGIDVYSVIQKREAEFNSSLRPNYDCRGFTAL 203

Query: 194 HYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKE 253
           HY V+   T+++E+LL++GA P +K   GH+P +Y +D  I + L+    KY   + ++ 
Sbjct: 204 HYAVLFRKTQIIEILLEAGAAPNLKSQMGHLPVEYTDDEEIIETLKNAEVKYRAQKLKEA 263

Query: 254 AEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTEL 313
           A ER++YPLE+R+K++I+GQE  I  +++AI+RKENGW ++D P+VFLFLGSSGIGKTEL
Sbjct: 264 AVERKRYPLEKRIKEQIIGQELPIAAVASAIRRKENGWHNEDRPMVFLFLGSSGIGKTEL 323

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           AKQ+A YIH+D +                VAK+IG+PPGY+GHD+GGQLTKRLKKC NAV
Sbjct: 324 AKQVAKYIHKDLE---------------NVAKMIGSPPGYIGHDEGGQLTKRLKKCSNAV 368

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           VL DEVDKAHPDVLT+LLQLFDEGRLTDGKGKTI+CKDAIF+MT NL + EIA +A++LR
Sbjct: 369 VLLDEVDKAHPDVLTILLQLFDEGRLTDGKGKTIDCKDAIFIMTCNLGNAEIANYAMELR 428

Query: 434 KEGEEFS-KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
           K+ +E + +R  S ++       +T+S+ F D V++PILK HFRRDEFLGRINEI+YFLP
Sbjct: 429 KKAKELAIERKKSDAEISDLEDKITLSKSFCDKVIKPILKSHFRRDEFLGRINEILYFLP 488

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
           FS+SEL  LV +EL +W+K A  +HNIN+ WD +V  ++ADGYDV+YGARSIK+E E+++
Sbjct: 489 FSRSELLLLVNKELCYWSKIAKHRHNINLTWDKEVLEVIADGYDVYYGARSIKYETEKRI 548

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKG 599
           ++QLAAAHE+ +I     + + V  +K+  E       I L++ K+G
Sbjct: 549 INQLAAAHERDLIQPNCDIHVAVTHNKKNQEQK-----ITLEMLKEG 590


>gi|226483493|emb|CAX74047.1| ClpB caseinolytic peptidase B homolog [Schistosoma japonicum]
          Length = 597

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 274/517 (52%), Positives = 351/517 (67%), Gaps = 22/517 (4%)

Query: 69  FASACSLALTLLECQ---------SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPL 119
           FA   S AL     Q         S K+  +F      +   L + +++SK     RH L
Sbjct: 42  FAKLASFALAFPSTQLDTIGFFGDSYKNSDIFECILSMNNTSLASILKSSKEAYKSRHSL 101

Query: 120 GWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFND 179
           GWTPL +A +    + V  LL++GANPN  D ++   +TA E +M   EV   R  +F+D
Sbjct: 102 GWTPLMLAVVTRNYEAVSALLKSGANPNDTDNYSGTVKTAHELRMLSSEVEWIRLTKFSD 161

Query: 180 VLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQ 239
            LNP+  F G +ALHY V+  + ++V LLL  GADPT+ +  GH P  YA+D++I+Q+L 
Sbjct: 162 FLNPSADFRGCTALHYAVLINDIKLVRLLLDKGADPTMTNERGHRPVMYAKDSSIRQLLV 221

Query: 240 KYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV 299
               K A+    KE EERR  PLE RL+  IVGQE+AI  +SAAI+RKENGW D+DHPLV
Sbjct: 222 VSESKKAEEMAVKEREERRLQPLESRLRKVIVGQEAAILTVSAAIRRKENGWYDEDHPLV 281

Query: 300 FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDG 359
           FLFLGSSGIGKTELAKQ+A Y+H+D K+ FIR+DMSEYQEKHEV+K IG+PPGY+GH++G
Sbjct: 282 FLFLGSSGIGKTELAKQVAAYLHKDIKKGFIRIDMSEYQEKHEVSKFIGSPPGYVGHEEG 341

Query: 360 GQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSN 419
           GQLT+ L  CPNAVVLFDE +KAHPDVLT LLQLFDEGRLTDG+G TI CKDAIF+MTSN
Sbjct: 342 GQLTRALATCPNAVVLFDETEKAHPDVLTALLQLFDEGRLTDGRGATINCKDAIFIMTSN 401

Query: 420 LASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDE 479
           + S  IA+HA  LR               S     D+ ISR FK+ V++PIL+RHF RDE
Sbjct: 402 VGSQVIAEHAQDLRH-------------SSGNDEADIEISRDFKEKVMRPILRRHFLRDE 448

Query: 480 FLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHY 539
           FLGRINE+VYFLPFS SEL  LV R L  W++KAL +H++ I W+ +V  ++ DGYDV+Y
Sbjct: 449 FLGRINEMVYFLPFSTSELTELVNRSLKSWSEKALKRHSLTITWNREVVDLIVDGYDVYY 508

Query: 540 GARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           GARSI +E+ER+++S LA A E+  +  GS V + V 
Sbjct: 509 GARSINYEIERRIISLLALADEQGYLHPGSHVNISVS 545


>gi|432106670|gb|ELK32323.1| Caseinolytic peptidase B protein like protein [Myotis davidii]
          Length = 596

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 275/458 (60%), Positives = 356/458 (77%), Gaps = 5/458 (1%)

Query: 124 LHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMN-PFEVLLKREDEFNDVLN 182
           L V A++  +  V +L EA  +  LG ++  V   AA        +VL+ RED+FN+ LN
Sbjct: 90  LKVGALDNGIHRVGLLAEATVDA-LGHVYVIVSGPAAAIGSRLSLDVLVTREDDFNNRLN 148

Query: 183 PNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYA 242
              +F G +ALHY  +A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+   
Sbjct: 149 NRASFKGCTALHYAALADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSE 208

Query: 243 EKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLF 302
            KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLF
Sbjct: 209 AKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLF 268

Query: 303 LGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQL 362
           LGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQL
Sbjct: 269 LGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQL 328

Query: 363 TKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLAS 422
           TK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS
Sbjct: 329 TKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVAS 388

Query: 423 NEIAQHALQLRKEGEEFS--KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEF 480
           +EIAQHALQLR+E  E S  +   ++   Q S+  +TIS++FK++V++PILK HFRRDEF
Sbjct: 389 DEIAQHALQLRQEALEMSHNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEF 447

Query: 481 LGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYG 540
           LGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYG
Sbjct: 448 LGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYG 507

Query: 541 ARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           ARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 508 ARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 545


>gi|410972741|ref|XP_003992815.1| PREDICTED: caseinolytic peptidase B protein homolog isoform 1
           [Felis catus]
          Length = 646

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 267/441 (60%), Positives = 350/441 (79%), Gaps = 6/441 (1%)

Query: 139 LLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVV 198
           LL AGA+PNLGD F++V++TA E+ ++  EVL+ RED+FN+ LN   +F G +ALHY V+
Sbjct: 156 LLAAGADPNLGDDFSSVYKTAKEQGIHSLEVLVTREDDFNNRLNNRASFKGCTALHYAVL 215

Query: 199 AGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERR 258
           A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR
Sbjct: 216 ADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERR 275

Query: 259 KYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLA 318
           ++PLEQRLK+ I+GQE+AI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A
Sbjct: 276 RFPLEQRLKEHIIGQENAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTA 335

Query: 319 FYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDE 378
            Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDE
Sbjct: 336 KYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDE 395

Query: 379 VDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEE 438
           VDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E
Sbjct: 396 VDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALE 455

Query: 439 FSKRTPSISKSQGS---NLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSK 495
            S     ++++ G    N  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  
Sbjct: 456 MSHN--RLAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCH 513

Query: 496 SELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQ 555
                     L+  + +A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+Q
Sbjct: 514 XXXXXXXGTLLSDLS-QAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQ 572

Query: 556 LAAAHEKSVIGKGSFVRLYVQ 576
           LAAA+E+ ++  G  +R+ V+
Sbjct: 573 LAAAYEQDLLPGGCTLRITVE 593


>gi|380798225|gb|AFE70988.1| caseinolytic peptidase B protein homolog, partial [Macaca mulatta]
          Length = 461

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 263/411 (63%), Positives = 336/411 (81%), Gaps = 3/411 (0%)

Query: 170 LLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYA 229
           L+ RED+FN+ LN   +F G +ALHY V+A +   V+ LL  GA+P  ++  GH P DYA
Sbjct: 1   LITREDDFNNRLNNRASFKGCTALHYAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYA 60

Query: 230 EDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKEN 289
            +  + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + AAI+RKEN
Sbjct: 61  REGEVMKLLRTSETKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVGAAIRRKEN 120

Query: 290 GWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
           GW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+
Sbjct: 121 GWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGS 180

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+C
Sbjct: 181 PPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDC 240

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVV 467
           KDAIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS++FK++V+
Sbjct: 241 KDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVI 299

Query: 468 QPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV 527
           +PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V
Sbjct: 300 RPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREV 359

Query: 528 ETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
             +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 360 ADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 410


>gi|326429238|gb|EGD74808.1| caseinolytic protease C [Salpingoeca sp. ATCC 50818]
          Length = 659

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 266/514 (51%), Positives = 366/514 (71%), Gaps = 39/514 (7%)

Query: 80  LECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVL 139
           ++C+      L +AA++   + L+  ++    DV+ RH LGWT LHVAA+NG VD  RVL
Sbjct: 101 VQCRQTNAPLLCKAAQFNDTQALEKLLQQGA-DVDDRHQLGWTALHVAAVNGNVDACRVL 159

Query: 140 LEAGANPNLGD-LFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVV 198
           LE GA+ +L D  F  + R A          +++R+ +F+  L P+M+ +G +ALHY  +
Sbjct: 160 LEHGASVDLEDEYFPNMSRAA----------IIQRQRDFSSRLYPHMSTVGMTALHYAAL 209

Query: 199 AGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERR 258
             + E+VELL+   ADP +KD++     +Y ++ +IK+ L+ Y E++A L+ E+E  E  
Sbjct: 210 VDSAELVELLIHHSADPNIKDHNECTAIEYTDNEHIKRRLRAYMEEHAALKEERERREAE 269

Query: 259 K-----------YPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
           +           +PLE+RL   +VGQ+  I  ++AA++R+ENGW D+DHPLVFLFLGSSG
Sbjct: 270 ERAEEAKRRRREFPLEERLHQYVVGQDGPIMAVAAAVRRRENGWHDEDHPLVFLFLGSSG 329

Query: 308 IGKTELAKQLAFYIHRDKK------EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQ 361
           +GKTELAK+LA YIH D+K      + FIRLDM+EYQEKHE AKLIGAPPGY+GHD+GGQ
Sbjct: 330 VGKTELAKRLAQYIHHDEKATSNRSKGFIRLDMTEYQEKHEAAKLIGAPPGYVGHDEGGQ 389

Query: 362 LTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLA 421
           LTK LK CPNAVVL DEV+KAHPDVLTV+LQLFDEGRLTDG+GKTI+CKDAIFVMTSNLA
Sbjct: 390 LTKMLKSCPNAVVLLDEVEKAHPDVLTVMLQLFDEGRLTDGQGKTIDCKDAIFVMTSNLA 449

Query: 422 SNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFL 481
           S+ IA+HA +LRK  EE           QGS+   ++S+ FK+ +++PILK HF+RDEFL
Sbjct: 450 SDVIAEHAWELRKRAEEL----------QGSDEHFSLSKQFKEQIIRPILKAHFKRDEFL 499

Query: 482 GRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGA 541
           GRI+EI+YF+PFSKSEL+ LV  EL  W ++A ++HN+ + WD  V   +A+ YD+HYGA
Sbjct: 500 GRIDEILYFVPFSKSELNQLVLLELKKWQQRAKERHNMELTWDDAVVQRVAEEYDIHYGA 559

Query: 542 RSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           RS++H V++ ++++LAAAHE+  I KG  V+L+V
Sbjct: 560 RSLQHAVDQLIINRLAAAHEQDKISKGCSVQLFV 593


>gi|360042934|emb|CCD78344.1| putative suppressor of potassium transport defect 3 (skd3 protein)
           [Schistosoma mansoni]
          Length = 506

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/472 (55%), Positives = 333/472 (70%), Gaps = 24/472 (5%)

Query: 104 TFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKK 163
           + +  SK  V  RH LGWTPL +A +    + VR LL+AG+NPN  D +  + RTA + +
Sbjct: 5   SILRGSKDAVKERHSLGWTPLMLAVVTKNYEAVRELLKAGSNPNDVDNYAGIVRTAHDLR 64

Query: 164 MNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGH 223
           M   EV   R  +F+D LNP+  F G SALHY V+  ++++V LLL+ GADPT+ +  GH
Sbjct: 65  MMSSEVEWIRLTQFSDFLNPSADFRGCSALHYAVLINDSKLVHLLLEFGADPTIVNERGH 124

Query: 224 IPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAA 283
            P+ YA+D++I+++L +   K A+    KE EERR  PLE RL+  IVGQE+AI  +SAA
Sbjct: 125 RPAMYAKDSSIRELLAEAESKKAEEVAAKEREERRLQPLENRLRKVIVGQEAAIRTVSAA 184

Query: 284 IKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEV 343
           I+RKENGW D+DHPLVFLFLGSSGIGKTELAKQ+A Y+H+D K+ FIR+DMSEYQEKHEV
Sbjct: 185 IRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQVAAYLHKDIKKGFIRIDMSEYQEKHEV 244

Query: 344 AKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGK 403
           +K IG+PPGY+GH++GGQLT+ L  CPNAVVLFDE +KAHPDVLT LLQLFDEGRLTDG+
Sbjct: 245 SKFIGSPPGYVGHEEGGQLTRALAACPNAVVLFDETEKAHPDVLTALLQLFDEGRLTDGR 304

Query: 404 GKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFK 463
           G TI CKDAIF+MTSN+ S  IA+HA QLR            +S + G        RH  
Sbjct: 305 GTTINCKDAIFIMTSNVGSQVIAEHAQQLRH-----------VSGNDG-------LRHLN 346

Query: 464 DHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVW 523
                    RHF RDEFLGRINE+VYFLPFS SEL  LV R L  W++KAL +H++ I W
Sbjct: 347 ------WTPRHFLRDEFLGRINEMVYFLPFSTSELTELVNRSLKSWSEKALKRHSLTITW 400

Query: 524 DIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           + +V  ++ DGYDV+YGARSI +E+ER+++S LA A E+  +  GS V + V
Sbjct: 401 NREVVDLIVDGYDVYYGARSINYEIERRIISLLALADEQGHLNPGSRVNISV 452


>gi|256078931|ref|XP_002575746.1| suppressor of potassium transport defect 3 (skd3 protein)
           [Schistosoma mansoni]
          Length = 506

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/473 (54%), Positives = 335/473 (70%), Gaps = 26/473 (5%)

Query: 104 TFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKK 163
           + +  SK  V  RH LGWTPL +A +    + VR LL+AG+NPN  D +  + RTA + +
Sbjct: 5   SILRGSKDAVKERHSLGWTPLMLAVVTKNYEAVRELLKAGSNPNDVDNYAGIVRTAHDLR 64

Query: 164 MNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGH 223
           M   EV   R  +F+D LNP+  F G SALHY V+  ++++V LLL+ GADPT+ +  GH
Sbjct: 65  MMSSEVEWIRLTQFSDFLNPSADFRGCSALHYAVLINDSKLVHLLLEFGADPTIVNERGH 124

Query: 224 IPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAA 283
            P+ YA+D++I+++L +   K A+    KE EERR  PLE RL+  IVGQE+AI  +SAA
Sbjct: 125 RPAMYAKDSSIRELLAEAESKKAEEVAAKEREERRLQPLENRLRKVIVGQEAAIRTVSAA 184

Query: 284 IKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEV 343
           I+RKENGW D+DHPLVFLFLGSSGIGKTELAKQ+A Y+H+D K+ FIR+DMSEYQEKHEV
Sbjct: 185 IRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQVAAYLHKDIKKGFIRIDMSEYQEKHEV 244

Query: 344 AKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGK 403
           +K IG+PPGY+GH++GGQLT+ L  CPNAVVLFDE +KAHPDVLT LLQLFDEGRLTDG+
Sbjct: 245 SKFIGSPPGYVGHEEGGQLTRALAACPNAVVLFDETEKAHPDVLTALLQLFDEGRLTDGR 304

Query: 404 GKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG-SNLDVTISRHF 462
           G TI CKDAIF+MTSN+ S  IA+HA QLR            +S + G  +L+ T     
Sbjct: 305 GTTINCKDAIFIMTSNVGSQVIAEHAQQLRH-----------VSGNDGLKHLNWT----- 348

Query: 463 KDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIV 522
                     RHF RDEFLGRINE+VYFLPFS SEL  LV R L  W++KAL +H++ I 
Sbjct: 349 ---------PRHFLRDEFLGRINEMVYFLPFSTSELTELVNRSLKSWSEKALKRHSLTIT 399

Query: 523 WDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           W+ +V  ++ DGYDV+YGARSI +E+ER+++S LA A E+  +  GS V + V
Sbjct: 400 WNREVVDLIVDGYDVYYGARSINYEIERRIISLLALADEQGHLNPGSRVNISV 452


>gi|292621865|ref|XP_002664799.1| PREDICTED: caseinolytic peptidase B protein homolog, partial [Danio
           rerio]
          Length = 409

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 242/365 (66%), Positives = 305/365 (83%), Gaps = 3/365 (0%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           ADP++K++ GH P  YA D  +  +L+   + +A+ QR++EAEERRK+PLE+RLK+ I+G
Sbjct: 1   ADPSLKNDLGHTPLSYARDGELSAVLRDAQDTFAEAQRKREAEERRKFPLERRLKEHIIG 60

Query: 273 QESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRL 332
           QE AIN +++AI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ+A Y+H+D K+ FIR+
Sbjct: 61  QEGAINTVASAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQVARYMHKDIKKGFIRM 120

Query: 333 DMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQ 392
           DMSE+QEKHEVAK IG+PPGY+GHD+GGQLTK+LK+ P+AVVLFDEV+KAHPDVLTV+LQ
Sbjct: 121 DMSEFQEKHEVAKFIGSPPGYVGHDEGGQLTKQLKQSPSAVVLFDEVEKAHPDVLTVMLQ 180

Query: 393 LFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQ 450
           LFDEGRLTDGKGKTIECKDAIF+MTSN AS+EIAQHALQLR+E +E S+R    ++   Q
Sbjct: 181 LFDEGRLTDGKGKTIECKDAIFIMTSNAASDEIAQHALQLRQEAQEQSRRRLAENLDDVQ 240

Query: 451 GSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA 510
            S  ++TIS  FK+ V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV REL++WA
Sbjct: 241 KSE-NITISNTFKEQVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELLQLVSRELHYWA 299

Query: 511 KKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSF 570
           KKA  +HNI ++W+  V  +L  GY++HYGARSIKHEVER+VV+QLAAA E+ ++ KG  
Sbjct: 300 KKAKQRHNITLLWERPVLELLVKGYNLHYGARSIKHEVERRVVNQLAAAFEQELLPKGCT 359

Query: 571 VRLYV 575
           +RL V
Sbjct: 360 LRLTV 364


>gi|350588232|ref|XP_003129658.3| PREDICTED: caseinolytic peptidase B protein homolog [Sus scrofa]
          Length = 504

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/369 (66%), Positives = 310/369 (84%), Gaps = 5/369 (1%)

Query: 211 SGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRI 270
            GA+P  ++  GH P DYA +  + ++L+    KY + QR++EAEERR++PLEQRLK+ I
Sbjct: 85  GGANPLQRNEMGHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHI 144

Query: 271 VGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFI 330
           +GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FI
Sbjct: 145 IGQESAIAAVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTARYMHKDAKKGFI 204

Query: 331 RLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVL 390
           RLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++
Sbjct: 205 RLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIM 264

Query: 391 LQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQ 450
           LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+    I+++ 
Sbjct: 265 LQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRN--RIAENL 322

Query: 451 G---SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
           G   S   +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELN
Sbjct: 323 GDVQSGDKITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELN 382

Query: 508 FWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGK 567
           FWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++ +
Sbjct: 383 FWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPE 442

Query: 568 GSFVRLYVQ 576
           G  +R+ V+
Sbjct: 443 GCCLRISVE 451


>gi|340383722|ref|XP_003390365.1| PREDICTED: caseinolytic peptidase B protein homolog [Amphimedon
           queenslandica]
          Length = 590

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 255/504 (50%), Positives = 339/504 (67%), Gaps = 45/504 (8%)

Query: 93  AARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLE-AGANPNLGDL 151
           AA+  +   LK  + N  +DVN RH LGWT LHV+ ING    V  L++  GAN N  D 
Sbjct: 107 AAKNSNIASLKRGLSNG-VDVNCRHQLGWTALHVSVINGNKKAVEWLIKVGGANVNTQDE 165

Query: 152 FNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKS 211
           +++  R A   K +  ++   RE  F   +NP  T+ GF+ LHY V+  N ++++LLL +
Sbjct: 166 YSSARRMARVLKASHHQIAQLREHHFCSFINPYATYTGFTPLHYAVITDNEDIIQLLLDN 225

Query: 212 GADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIV 271
           GA+P+++D+ G  P +Y  + +++++L+KY+ K+ + +  K  EERRKYPLE RL++ +V
Sbjct: 226 GANPSIEDSMGRTPINYCTNESVRKLLEKYSVKFEENELRKRLEERRKYPLEDRLRNHLV 285

Query: 272 GQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           GQE AI  +++AI+R+E GW D DHPLVFLFLGSSGI                       
Sbjct: 286 GQEGAITTVASAIRRRELGWNDTDHPLVFLFLGSSGI----------------------- 322

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
                      VAKLIGAPPGY+G+D GGQLT  LK+CPNA+VLFDEV+KAHPDVLTVLL
Sbjct: 323 ----------VVAKLIGAPPGYIGYDQGGQLTSLLKQCPNALVLFDEVEKAHPDVLTVLL 372

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           QLFDEGRLTDG+G TI CKDA+FVMTSNLAS EIAQH L+LR+E         +I +   
Sbjct: 373 QLFDEGRLTDGQGNTISCKDAVFVMTSNLASEEIAQHGLRLRQEA------INNIMRDDD 426

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAK 511
               V ISR+FK++V++PILK HF RDEF+GRINEIVYFLPFS+SEL  LV +EL  W K
Sbjct: 427 GKETVEISRNFKENVIEPILKHHFHRDEFIGRINEIVYFLPFSRSELQKLVEQELIVWQK 486

Query: 512 KALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
           +A+++H I + WD +V  +++DGY+V YGARSI HEVER VV+QLA A+EK  I KGS V
Sbjct: 487 RAMERHQIKLTWDREVLDVVSDGYNVKYGARSIHHEVERTVVNQLALAYEKEYISKGSSV 546

Query: 572 RLYVQWSKEVSEDSAKGGIIKLKV 595
            L V+  KE +E   +G ++ +KV
Sbjct: 547 HLIVK--KEGNE--GRGPLVSIKV 566


>gi|431898077|gb|ELK06780.1| Caseinolytic peptidase B protein like protein [Pteropus alecto]
          Length = 425

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/369 (65%), Positives = 309/369 (83%), Gaps = 3/369 (0%)

Query: 212 GADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIV 271
           GA+P  ++  GH P DYA +  + ++L+    K+ + QR++EAEERR++PLEQRLK+ I+
Sbjct: 7   GANPLQRNEMGHTPLDYAREGEVMKLLRTSEVKFQEKQRKREAEERRRFPLEQRLKEHII 66

Query: 272 GQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIR
Sbjct: 67  GQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIR 126

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++L
Sbjct: 127 LDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIML 186

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEF--SKRTPSISKS 449
           QLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E   ++   ++   
Sbjct: 187 QLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMNHNRIAENLGDV 246

Query: 450 QGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFW 509
           Q S+  +TIS++F+++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFW
Sbjct: 247 QISD-KITISKNFRENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFW 305

Query: 510 AKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGS 569
           AK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G 
Sbjct: 306 AKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGC 365

Query: 570 FVRLYVQWS 578
            +R+ V+ S
Sbjct: 366 TLRITVEDS 374


>gi|343958262|dbj|BAK62986.1| caseinolytic peptidase B protein homolog [Pan troglodytes]
          Length = 410

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/359 (67%), Positives = 303/359 (84%), Gaps = 3/359 (0%)

Query: 222 GHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIIS 281
           GH P DYA +  + ++L+    KY + QR++EAEERR++PLEQRLK+ I+GQESAI  + 
Sbjct: 2   GHTPLDYAREGEVMKLLRTSEAKYQEKQRKREAEERRRFPLEQRLKEHIIGQESAIATVG 61

Query: 282 AAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKH 341
           AAI+RKENGW D++HPLVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIRLDMSE+QE+H
Sbjct: 62  AAIRRKENGWYDEEHPLVFLFLGSSGIGKTELAKQTAKYMHKDAKKGFIRLDMSEFQERH 121

Query: 342 EVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTD 401
           EVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTD
Sbjct: 122 EVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTD 181

Query: 402 GKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TPSISKSQGSNLDVTIS 459
           GKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+     ++   Q S+  +TIS
Sbjct: 182 GKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAENLGDVQISD-KITIS 240

Query: 460 RHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNI 519
           ++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAK+A  +HNI
Sbjct: 241 KNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKRAKQRHNI 300

Query: 520 NIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
            ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 301 TLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 359


>gi|358341276|dbj|GAA48992.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Clonorchis
           sinensis]
          Length = 489

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 243/437 (55%), Positives = 318/437 (72%), Gaps = 13/437 (2%)

Query: 139 LLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVV 198
           LL+ GANPNL D +    + A E  +   ++  +R  +F D LNP+  F G +ALHY V+
Sbjct: 5   LLDLGANPNLVDQYPGSLKLARETHVYHGDIEWRRLTQFTDFLNPSADFRGCTALHYAVL 64

Query: 199 AGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERR 258
             +  +V LL+  GAD ++ +  GH P  YA+D +IK++L K   +    + EKE EERR
Sbjct: 65  VNDLSLVRLLVDKGADVSIVNERGHRPIMYAKDRSIKELLTKAETELEKKKAEKEREERR 124

Query: 259 KYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLA 318
             PLE RL+  +VGQE+AI  +SAAI+RKENGW D+DHPLVFLFLGSSGIGKTELAKQ+A
Sbjct: 125 LQPLESRLRKALVGQEAAIRTVSAAIRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQIA 184

Query: 319 FYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDE 378
            Y+H+D K+ FIR+DMSEYQ+KHEV+K IG+PPGY+GH+ GGQLT+ L  CPNAVVLFDE
Sbjct: 185 AYLHKDVKKGFIRIDMSEYQQKHEVSKFIGSPPGYIGHEQGGQLTQALSACPNAVVLFDE 244

Query: 379 VDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEE 438
            +KAHPDVLT LLQLFDEGRLTDG+G TI+CKDAIF+MTSN+ S  IA+HA  LR+    
Sbjct: 245 TEKAHPDVLTALLQLFDEGRLTDGRGHTIDCKDAIFIMTSNVGSQVIAEHAQALRQ---- 300

Query: 439 FSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSEL 498
                     S  S  D+ +SR FK++V++PIL+ +F RDEFLGRINE+VYFLPFS SEL
Sbjct: 301 ---------ASGDSEADIELSRDFKENVMRPILRHNFLRDEFLGRINEMVYFLPFSTSEL 351

Query: 499 HTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAA 558
             LV R L+ W ++A  +H+I++ WD +V  ++ DGYDV+YGARSI++EVER+++S LA 
Sbjct: 352 TQLVYRYLSMWQERASKRHSISLCWDREVIDLIVDGYDVYYGARSIQYEVERRIISLLAL 411

Query: 559 AHEKSVIGKGSFVRLYV 575
           A E+ +I  G  VR+ V
Sbjct: 412 ADEQGLISPGCQVRISV 428


>gi|167519455|ref|XP_001744067.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777153|gb|EDQ90770.1| predicted protein [Monosiga brevicollis MX1]
          Length = 486

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/481 (48%), Positives = 324/481 (67%), Gaps = 20/481 (4%)

Query: 105 FIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKM 164
            + + ++D ++RH  GW+ LH+A + G+ D VR LL+AGA+PN  D +     T      
Sbjct: 3   LLTSHQVDADLRHEAGWSALHLAVVRGQADVVRALLDAGADPNQEDRYGAARFTRHSVIA 62

Query: 165 NPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHI 224
                  +RE  F+  L+P    LG +ALHY  + G  ++++LL+   ADP +   +G +
Sbjct: 63  RQVRTFGQRE--FSSDLDPLQPGLGLTALHYAALFGQADIIKLLMDRAADPGMHSAAGDV 120

Query: 225 PSDYAEDANIKQILQKYAEKYADLQREKEAEERRK-------YPLEQRLKDRIVGQESAI 277
           P D A    I+ +L  YA++Y  ++ + +  +  +       +PLE RL   IVGQ+  I
Sbjct: 121 PRDLAATPAIEAMLDDYAQQYETIKAKHQQAQAAEARRRRQLFPLEDRLHRYIVGQDGPI 180

Query: 278 NIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKK-------EAFI 330
             ++AAI+RKENGW ++DHPLVFLFLGSSG+GKTELAK++A YIH D+        E F+
Sbjct: 181 MSVAAAIRRKENGWHNEDHPLVFLFLGSSGVGKTELAKRIAQYIHDDESPRVPASFEGFV 240

Query: 331 RLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVL 390
           RLDMSE+QEKHEV+KLIG+P GY+GH+DGG LT  L KC NAVVLFDEV+KAHPDVLTVL
Sbjct: 241 RLDMSEFQEKHEVSKLIGSPAGYVGHEDGGVLTNALSKCKNAVVLFDEVEKAHPDVLTVL 300

Query: 391 LQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKE--GEEFSKR--TPSI 446
           LQLFDEGR+TDG+G+T+ECKDA+F+MTSNLAS+ IAQHA +LR+         R  +P  
Sbjct: 301 LQLFDEGRITDGRGQTVECKDAVFIMTSNLASDVIAQHAWELRQATCARRLITRFDSPLT 360

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
                S     +SR FK HV++PILKRHF+RDEFLGRI++ VYF PF+ +E   L+  EL
Sbjct: 361 RIVYQSETSFQLSREFKQHVIRPILKRHFQRDEFLGRIDQTVYFTPFTDAEQRDLIRMEL 420

Query: 507 NFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
           + WA KA ++HNI + W   V ++LA  +D+H+GARS++H +++ V++++A  HEK  IG
Sbjct: 421 DNWAVKAAERHNIELSWSDAVYSVLASEFDIHFGARSLQHAIDQLVINRIAMVHEKVRIG 480

Query: 567 K 567
           +
Sbjct: 481 R 481


>gi|313230285|emb|CBY07989.1| unnamed protein product [Oikopleura dioica]
          Length = 537

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/481 (49%), Positives = 325/481 (67%), Gaps = 31/481 (6%)

Query: 113 VNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLK 172
            N  H  GWTPLH+AA       V++LLE+GA+P+L + +  V   A +   +  + +L+
Sbjct: 61  TNQYHKYGWTPLHLAAAWNDEKMVKMLLESGADPDLQEKY--VKPVAKQFGQHYTQAMLR 118

Query: 173 REDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDA 232
           +E +F   L+P + + G +AL Y V+  N ++ +LL+ +GADP VK + G  P +  +++
Sbjct: 119 KE-QFPTHLSPKIDYRGATALFYAVLNDNHQMAKLLIDAGADPLVKLHQGISPIEVVDES 177

Query: 233 NIKQILQKYAEKYADLQREKEA---EERRKYPLEQRLKDRIVGQESAINIISAAIKRKEN 289
           +   ++ K   K  +  + ++A   E+R+KYPLE RL + I+GQ++AI  ++AAI+RKEN
Sbjct: 178 SKNGLMIKV--KVNNTIKNRDALLKEKRKKYPLESRLSENIIGQKAAIKQVAAAIRRKEN 235

Query: 290 GWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
           GW D DHP+V +FLGSSGIGKTELAKQ+A YIH + KE F+R+DMSEY  +HEVA+LIGA
Sbjct: 236 GWVDSDHPVVMIFLGSSGIGKTELAKQVAKYIHGNMKEGFVRIDMSEYSSQHEVARLIGA 295

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+GHD GGQLT+ L KCPNAVVLFDE++KAHPD L +LLQLFDEGR+TDG+GKTIEC
Sbjct: 296 PPGYVGHDKGGQLTEALTKCPNAVVLFDEIEKAHPDALPILLQLFDEGRMTDGQGKTIEC 355

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           KDAIF+MTSNLAS +IA + + LR +GEE                  T+ + F+  VV+P
Sbjct: 356 KDAIFIMTSNLASGQIADYGVALRSKGEE----------------KTTVDKEFRQSVVKP 399

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFS-------KSELHTLVCRELNFWAKKALDKHNINIV 522
           ILK HF+RDEFLGRINE VYFLPFS       ++  H      L  W + A DKH+I + 
Sbjct: 400 ILKFHFKRDEFLGRINEFVYFLPFSVLQSRRIRTRAHKFFGTMLGLWKRIAKDKHDIELS 459

Query: 523 WDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
           W+  V ++LADGY+V YGARS+KHE ER+VVS LA A+E   + K   V L     K V 
Sbjct: 460 WEEAVISVLADGYEVSYGARSVKHESERKVVSALAEAYETGKLSKNMKVVLSCNLPKNVE 519

Query: 583 E 583
           +
Sbjct: 520 D 520


>gi|339243907|ref|XP_003377879.1| chaperone protein ClpB [Trichinella spiralis]
 gi|316973256|gb|EFV56876.1| chaperone protein ClpB [Trichinella spiralis]
          Length = 408

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/363 (60%), Positives = 284/363 (78%), Gaps = 14/363 (3%)

Query: 212 GADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIV 271
           GADP   + SG +P +YA++  I+++L+ Y +KY + +   E  ER+ YP E+R+K  ++
Sbjct: 17  GADPLSSNESGQLPVNYAQNQQIEELLKGYTKKYTEKKALLERLERQNYPFEERVKKNMI 76

Query: 272 GQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           GQ+ AI+ +++AI+R+ENGWT+D+HPLVFLFLGSSG+GKTELAKQ+A Y+++D K++FIR
Sbjct: 77  GQDGAISSVASAIRRRENGWTNDEHPLVFLFLGSSGVGKTELAKQVAQYLYKDNKKSFIR 136

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           +DMSEYQEKHEVAK IG+PPGY+GH  GGQLTK L +CPNAVVLFDEV+KAHPDVLT++L
Sbjct: 137 IDMSEYQEKHEVAKFIGSPPGYVGHQQGGQLTKSLTECPNAVVLFDEVEKAHPDVLTIML 196

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEF-SKRTPSISKSQ 450
           QLFDEGRLTDG GKT++CK+AIF+MTSNLA+ EIA HAL+LRKE  +   KR  +  +  
Sbjct: 197 QLFDEGRLTDGMGKTVDCKEAIFIMTSNLAAEEIASHALKLRKETADMVEKRLSNTLEDL 256

Query: 451 GSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA 510
               +VTISR FK+ VVQPILKRH +RDEF+GRI EI             LV REL FW 
Sbjct: 257 NEAENVTISRKFKETVVQPILKRHLKRDEFIGRITEI-------------LVTRELEFWK 303

Query: 511 KKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSF 570
            KAL KH I++ WD +V  +LADGY+V YGARSIKHE+ERQVVS+LAAAHE+S+I  GS 
Sbjct: 304 MKALQKHKIHLTWDQNVLEVLADGYNVRYGARSIKHEIERQVVSKLAAAHERSLINDGSE 363

Query: 571 VRL 573
           VR+
Sbjct: 364 VRI 366


>gi|405959363|gb|EKC25409.1| Caseinolytic peptidase B-like protein [Crassostrea gigas]
          Length = 523

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/434 (56%), Positives = 320/434 (73%), Gaps = 27/434 (6%)

Query: 188 LGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
           LG++ALH   +  +T ++ELLL+ GADP + D       +Y+    I +  Q++      
Sbjct: 88  LGWTALHIAAINQDTRLLELLLRLGADPNIGD-------EYSTYFAIAR-EQRFDPMSVL 139

Query: 248 LQREKEAEERRKYPLEQR--------LKDRIVGQESAIN--IISAAIKRKENGWTDDDHP 297
           + RE+E  +R    L QR        L   ++ ++  I   ++ AAI+RKENGW D+DHP
Sbjct: 140 MVREEEFNDR----LSQRANFKGCTPLHYAVLMEDFTIVKLLLDAAIRRKENGWYDEDHP 195

Query: 298 LVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHD 357
           LVFLFLGSSGIGKTELAKQ A Y+H+D K+ FIR+DMSEYQEKHEVAK IG+PPGY+GH+
Sbjct: 196 LVFLFLGSSGIGKTELAKQAAKYLHKDVKKGFIRIDMSEYQEKHEVAKFIGSPPGYVGHE 255

Query: 358 DGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMT 417
           +GGQLTK+L +CPNAVVLFDEV+KAHPDVLT++LQLFDEGRLTDGKGKTIECKDAIF+MT
Sbjct: 256 EGGQLTKKLTECPNAVVLFDEVEKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIFIMT 315

Query: 418 SNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD-VTISRHFKDHVVQPILKRHFR 476
           SNLAS  IA HALQLR E  E++K   +         + +TISR FKD VV+PILKR FR
Sbjct: 316 SNLASEVIASHALQLRAEAAEYNKHKDAQKLEDLEAAERITISRKFKDDVVRPILKRAFR 375

Query: 477 RDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYD 536
           RDEFLGRINEIVYFLPFS+SEL  LV +EL +W+++A  KH+I++VWD +V  +LADGYD
Sbjct: 376 RDEFLGRINEIVYFLPFSRSELSKLVTKELQYWSEQAKKKHDISLVWDHNVVDVLADGYD 435

Query: 537 VHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS---EDSAKGGIIKL 593
           VHYGARSIK+EVER+VV+QLA AHE+ +I KG  +RL    +++++   + S +   IKL
Sbjct: 436 VHYGARSIKYEVERRVVTQLAMAHERQLIEKGCVIRLLATNAEDLTKTDKSSVEPPTIKL 495

Query: 594 KVKKKGMKD-FIDV 606
           ++ +KG  D ++D+
Sbjct: 496 QLLQKGKGDKYVDI 509



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/102 (45%), Positives = 66/102 (64%)

Query: 111 LDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVL 170
           +DVN RH LGWT LH+AAIN     + +LL  GA+PN+GD ++T    A E++ +P  VL
Sbjct: 80  VDVNCRHQLGWTALHIAAINQDTRLLELLLRLGADPNIGDEYSTYFAIAREQRFDPMSVL 139

Query: 171 LKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSG 212
           + RE+EFND L+    F G + LHY V+  +  +V+LLL + 
Sbjct: 140 MVREEEFNDRLSQRANFKGCTPLHYAVLMEDFTIVKLLLDAA 181


>gi|301622957|ref|XP_002940790.1| PREDICTED: caseinolytic peptidase B protein homolog [Xenopus
           (Silurana) tropicalis]
          Length = 811

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/420 (54%), Positives = 302/420 (71%), Gaps = 44/420 (10%)

Query: 169 VLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDY 228
           VL+ REDEF+D LN   +F G +ALHY V+A +   V  LL+ GA+P  K++ GH P DY
Sbjct: 375 VLVTREDEFSDRLNNRASFRGCTALHYAVLADDYGTVRELLEGGANPQQKNDMGHTPIDY 434

Query: 229 AEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKE 288
           A +  +KQ+L+ +  ++ + QR+++ EERR++PLE+RLK+ IVGQESAI  ++A      
Sbjct: 435 AREGELKQLLRGWESRFQEEQRKRDMEERRRFPLERRLKEHIVGQESAIATVAA------ 488

Query: 289 NGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKH-----EV 343
                               GKTELAKQ A Y+H+D K+    L    Y+ ++     +V
Sbjct: 489 --------------------GKTELAKQTARYMHKDIKKRNCWLVAMGYRTRYLFLLPQV 528

Query: 344 AKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGK 403
           AK IG+PPGY+GH++GGQLTK+LK+CP+AVVLFDEVDKAHPDVLT++LQLFDEGRLTDGK
Sbjct: 529 AKFIGSPPGYVGHEEGGQLTKKLKQCPDAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGK 588

Query: 404 GKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD-------V 456
           GKTIECKDAIF+MT N  S+EIAQ+ LQLR+E  E +K      K    NLD       +
Sbjct: 589 GKTIECKDAIFIMTCNAGSDEIAQYGLQLRQEAHEINK------KRLAQNLDDIQTSEKI 642

Query: 457 TISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDK 516
           TIS+ FK++V++PILK HFRRDEFLGRINEIVYFLPF +SEL  LV +ELN WAKKA  +
Sbjct: 643 TISKQFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCRSELSQLVRKELNSWAKKAKQR 702

Query: 517 HNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           H+I ++WD +V  +LADGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++ +G  +R+ V+
Sbjct: 703 HSITLMWDPEVIDVLADGYNVHYGARSIKHEVERRVVNQLAAAYEQDLLPRGCTLRITVE 762



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 40/50 (80%)

Query: 244 KYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           K+ + QR+++ EERR++PLE+RLK+ IVGQESAI  ++A +  +E+ ++D
Sbjct: 336 KFQEEQRKRDMEERRRFPLERRLKEHIVGQESAIATVAAVLVTREDEFSD 385


>gi|321458204|gb|EFX69276.1| hypothetical protein DAPPUDRAFT_329298 [Daphnia pulex]
          Length = 542

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/491 (47%), Positives = 326/491 (66%), Gaps = 39/491 (7%)

Query: 120 GWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFND 179
           GWTPLH+AA  G V  ++VLL+ GANPNLG                            +D
Sbjct: 59  GWTPLHIAASQGNVHVIKVLLKCGANPNLG----------------------------HD 90

Query: 180 VLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQ 239
           + N ++   G +ALHY  +  +   V  LL +GA+P++ ++ G  P D       +++L 
Sbjct: 91  I-NNHLILSGCTALHYACIIDDAACVAALLNAGANPSLTNHCGKKPFDCTNSYATRKLL- 148

Query: 240 KYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV 299
                Y ++  ++  E RRKYP +  LK +I+GQ++AI+ +++ I+RKENGW D++ PLV
Sbjct: 149 -----YENMAEKRGVENRRKYPFDFWLKGKIIGQKAAIDTVASTIRRKENGWVDEERPLV 203

Query: 300 FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDG 359
           FLFLGSSGIGKTE+AKQ+A Y++    EAFIRLDMSEYQ K+EV+K+IG+PPGY+G  + 
Sbjct: 204 FLFLGSSGIGKTEIAKQVANYLNPKDSEAFIRLDMSEYQHKNEVSKIIGSPPGYVGFKES 263

Query: 360 GQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSN 419
           GQLTK+L+KCP AVVL DEVDKAHPD+L+VLLQLFDEGR+T+GKG+TI CKDAIF+MTSN
Sbjct: 264 GQLTKKLEKCPYAVVLLDEVDKAHPDILSVLLQLFDEGRITNGKGQTIFCKDAIFIMTSN 323

Query: 420 LASNEIAQHALQLRKEGEEFS--KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRR 477
           LA++EI  HA Q R+   E +  +RT +  +     + ++ISR F + +++PILKRHF R
Sbjct: 324 LANDEITNHAEQQRRLKVEVASKQRTQNDEEVNMPTISISISREFDEFIIRPILKRHFGR 383

Query: 478 DEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDV 537
           DEFLGRINEIVYF PFS  E+H LV +EL+F AKKA D++++N+ WD  V   L  GY V
Sbjct: 384 DEFLGRINEIVYFQPFSSDEIHQLVKKELDFLAKKAKDRYDVNLSWDEQVLKELGLGYKV 443

Query: 538 HYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKE--VSEDSAKGGIIKLKV 595
            YGARSIK+E +R+  S L+   E     +G+ ++LY++ S     +++S     I L++
Sbjct: 444 AYGARSIKYEADRKAASLLSNFQELHGFQRGAMLQLYIENSGNGPSTDESPFPRQIHLRI 503

Query: 596 KKKGMKDFIDV 606
           K K   +F  V
Sbjct: 504 KNKDSVEFTAV 514


>gi|328780549|ref|XP_003249816.1| PREDICTED: caseinolytic peptidase B protein homolog [Apis
           mellifera]
          Length = 528

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/420 (55%), Positives = 284/420 (67%), Gaps = 50/420 (11%)

Query: 187 FLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYA 246
            LG++ALH   +    EVV+LLLK GAD   +D   ++     E                
Sbjct: 146 LLGWTALHLAAINSQPEVVKLLLKYGADVNAQDEFINVYGSAIEKG-------------- 191

Query: 247 DLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSS 306
                   EERR++PLEQRLK  IVGQ  AI+I+++ I+RKENGW D+ HPLVFLFLGSS
Sbjct: 192 ---LHTLDEERRRFPLEQRLKQYIVGQAGAISIVASTIRRKENGWIDEKHPLVFLFLGSS 248

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           GIGKTELAKQLA YIH++K+E FIRLDMSEYQEKHEVAKLIGAPPGY+GHDDGGQLTK L
Sbjct: 249 GIGKTELAKQLAAYIHKNKQEGFIRLDMSEYQEKHEVAKLIGAPPGYVGHDDGGQLTKLL 308

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           +KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGK                       
Sbjct: 309 RKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGK----------------------- 345

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
              +QLR+E +   K+       +  +  + ISR FKD VV+PILK HF RDEFLGRINE
Sbjct: 346 ---VQLREEAQRVEKKQDINCDVEEDSEQIEISRKFKDEVVRPILKTHFGRDEFLGRINE 402

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           IVYFLPFS+SEL  LV +EL  WA +A  +H I + W+ +V ++LA+GYD HYGARSIK+
Sbjct: 403 IVYFLPFSQSELIKLVAKELEAWADRAKKRHKIELKWNREVLSLLAEGYDTHYGARSIKY 462

Query: 547 EVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKGMKDFIDV 606
           EVER+VV+QLAAAHE+  +  G  V + V+W K        G  I L +++KG KDF+D+
Sbjct: 463 EVERRVVNQLAAAHERGQLEIGCCVLVKVKWYK-------NGASIALSIRRKGAKDFVDL 515



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 1/98 (1%)

Query: 71  SACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAIN 130
           S   + +TL E ++ +D   FRA +YG+  ELK+ I+   +D+N RH LGWT LH+AAIN
Sbjct: 100 SGIGITITLCEAKNYRDKQFFRAVKYGNIPELKSIIKEG-IDINTRHLLGWTALHLAAIN 158

Query: 131 GKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFE 168
            + + V++LL+ GA+ N  D F  V+ +A EK ++  +
Sbjct: 159 SQPEVVKLLLKYGADVNAQDEFINVYGSAIEKGLHTLD 196


>gi|384490395|gb|EIE81617.1| hypothetical protein RO3G_06322 [Rhizopus delemar RA 99-880]
          Length = 951

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 251/600 (41%), Positives = 347/600 (57%), Gaps = 70/600 (11%)

Query: 29  FQSSKLFYTTQSTQADFKSCLSV------FPKIRQSNNTCMYNNLLFASACSLALTLLEC 82
           FQ +K    T++T A    C++       FP I ++        L+  ++      L E 
Sbjct: 23  FQPTKYLSPTKTTAASI--CVATRRHQNQFPFIWKATAFIATAALVNETSVGQVFALEEN 80

Query: 83  QSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEA 142
           +   D+ + +A      K LK   E+   + N+ H  GWTPL VA I      V+ LLE 
Sbjct: 81  EPTGDI-ICQAIVQNDFKALKRMAEHPNFNPNVYHRYGWTPLQVAVIQDNDQMVKFLLEK 139

Query: 143 GANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNT 202
           GA     DL   +            E+  + E   N             ALHY V+  N 
Sbjct: 140 GA-----DLIKLL----IHDNWISLEIYYRTEIIENT-----------HALHYAVIICNP 179

Query: 203 EVVELLLKSGADPTVKDNSGHIPSDY---------AEDANIKQILQKYAEKYAD------ 247
           ++V LLL   ADP  +++ G    +Y          ++  I+++L K    Y        
Sbjct: 180 QIVSLLLNYMADPFARNSHGLTAREYLYYVERYTGEQNIEIEEMLYKKEASYPKDKAEHD 239

Query: 248 -----LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLF 302
                 Q +KE E R+K+PLE  LK RIVGQ   I  +++AI+RK+NGW D++HPLVFLF
Sbjct: 240 DRVRKAQLQKEKEYRKKHPLEDALKSRIVGQLGPIYALASAIRRKQNGWHDEEHPLVFLF 299

Query: 303 LGSSGIGKTELAKQLAFYIH-RDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQ 361
            GSSG+GKTELAK LA  +H +   + FIR+DMSE+Q KH+V++ IG+PPGY+G+D+GGQ
Sbjct: 300 CGSSGVGKTELAKALAQNLHGKQMDKGFIRIDMSEFQHKHDVSRFIGSPPGYVGYDEGGQ 359

Query: 362 LTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLA 421
           LT++LK+CPNAVVL DEV+KAHPDVLT++LQLFDEGR+TDGKG T+ECKDAIF+MTSNLA
Sbjct: 360 LTEKLKECPNAVVLLDEVEKAHPDVLTIMLQLFDEGRITDGKGTTVECKDAIFIMTSNLA 419

Query: 422 SNEIAQHALQLRKE--------------------GEEFSKRTPSISKSQGSNLDVTISRH 461
            +EIA  A  LR E                    G    K+   + + Q     +++SR 
Sbjct: 420 QHEIADEAELLRLEASVSSDAQTTGVATVAPTDSGTISQKKLSELQEEQLKQGQISLSRQ 479

Query: 462 FKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI 521
           F +H + PIL +HF+RDEFLGRINE+++FLPFS  EL  +  REL+ WA+K+  +H I +
Sbjct: 480 FIEHTIYPILYQHFKRDEFLGRINEVLFFLPFSDDELREITSRELSKWAEKSRKRHGITM 539

Query: 522 VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
            WD DV  +LADGY++ YGARSIK+EVER+VV+ +A AHE   +  G  V + V+ S +V
Sbjct: 540 TWDADVVDVLADGYNIRYGARSIKYEVERKVVNLIAKAHENDEVLDGGRVHIVVEKSLDV 599


>gi|355679756|gb|AER96406.1| ClpB caseinolytic peptidase B-like protein [Mustela putorius furo]
          Length = 326

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/328 (65%), Positives = 267/328 (81%), Gaps = 12/328 (3%)

Query: 195 YGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEA 254
           Y V+A +   V+ LL  GA+P  ++  GH P DYA +  + ++L+    KY + QR++EA
Sbjct: 1   YAVLADDYRTVKELLDGGANPLQRNEMGHTPLDYAREGEVMKLLRTSEVKYQEKQRKREA 60

Query: 255 EERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELA 314
           EERR++PLEQRLK+ I+GQESAI  + AAI+RKENGW D++HPLVFLFLGSSGIGKTELA
Sbjct: 61  EERRRFPLEQRLKEHIIGQESAIATVGAAIRRKENGWYDEEHPLVFLFLGSSGIGKTELA 120

Query: 315 KQLAFYIHR-------DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           KQ A Y+H+       D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK
Sbjct: 121 KQTAKYMHKTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYIGHEEGGQLTKKLK 180

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           +CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQ
Sbjct: 181 QCPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQ 240

Query: 428 HALQLRKEGEEFSKRTPSISKSQGS---NLDVTISRHFKDHVVQPILKRHFRRDEFLGRI 484
           HALQLR+E  E S+    I+++ G    N  +TIS++FK++V++PILK HFRRDEFLGRI
Sbjct: 241 HALQLRQEALEMSRN--RIAENLGDVQINDKITISKNFKENVIRPILKAHFRRDEFLGRI 298

Query: 485 NEIVYFLPFSKSELHTLVCRELNFWAKK 512
           NEIVYFLPF  SEL  LV +ELNFWAK+
Sbjct: 299 NEIVYFLPFCHSELIQLVNKELNFWAKR 326


>gi|291223471|ref|XP_002731733.1| PREDICTED: suppressor of K+ transport defect 3-like [Saccoglossus
           kowalevskii]
          Length = 513

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/332 (58%), Positives = 253/332 (76%), Gaps = 8/332 (2%)

Query: 71  SACSLALTLLECQ--SIKDLT----LFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPL 124
           +AC    T+  C   SI D T    LF AA+  +  ELK  I+    DVN  H LGWTPL
Sbjct: 66  TACGFC-TVAYCSTGSIDDRTSSERLFNAAKRNNIIELKRLIKQGS-DVNQIHELGWTPL 123

Query: 125 HVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPN 184
            VAA++G    VRVLLEAGA+PN+ D F  V   +   K+N   VL+ RED+F D LN  
Sbjct: 124 MVAAVHGNEGAVRVLLEAGADPNMKDGFTNVFDMSQRTKINSLHVLVTREDDFCDRLNVR 183

Query: 185 MTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEK 244
             F G +ALHY +++ + EVV+LLL SGADPT++++SGH P +Y  +  I+++L+++  K
Sbjct: 184 ANFKGCTALHYAILSDSCEVVKLLLNSGADPTLENDSGHHPMEYTRNEEIRKLLKEHETK 243

Query: 245 YADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLG 304
           Y +LQ+++EAEERRK+PL++R+K+ +VGQ+ AI  +++AI+RKENGW D+DHPLVFLFLG
Sbjct: 244 YEELQKQREAEERRKFPLDKRIKEVLVGQDGAITTVASAIRRKENGWYDEDHPLVFLFLG 303

Query: 305 SSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTK 364
           SSGIGKTELAKQ+A Y+HRD K+ FIRLDMSEYQE+HEVAK IG+PPGY+GH+ GGQLTK
Sbjct: 304 SSGIGKTELAKQVAKYLHRDHKKGFIRLDMSEYQERHEVAKFIGSPPGYVGHEQGGQLTK 363

Query: 365 RLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDE 396
           +LK+CPNAVVLFDEVDKAHPDVLT++LQLFDE
Sbjct: 364 QLKQCPNAVVLFDEVDKAHPDVLTIMLQLFDE 395


>gi|21740264|emb|CAD39142.1| hypothetical protein [Homo sapiens]
          Length = 322

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/272 (68%), Positives = 233/272 (85%), Gaps = 3/272 (1%)

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAKQ A Y+H+D K+ FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+
Sbjct: 1   GKTELAKQTAKYMHKDAKKGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQ 60

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
           CPNAVVLFDEVDKAHPDVLT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQH
Sbjct: 61  CPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQH 120

Query: 429 ALQLRKEGEEFSKR--TPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           ALQLR+E  E S+     ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINE
Sbjct: 121 ALQLRQEALEMSRNRIAENLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINE 179

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           IVYFLPF  SEL  LV +ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKH
Sbjct: 180 IVYFLPFCHSELIQLVNKELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKH 239

Query: 547 EVERQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           EVER+VV+QLAAA+E+ ++  G  +R+ V+ S
Sbjct: 240 EVERRVVNQLAAAYEQDLLPGGCTLRITVEDS 271


>gi|345310242|ref|XP_001511439.2| PREDICTED: caseinolytic peptidase B protein homolog, partial
           [Ornithorhynchus anatinus]
          Length = 321

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 175/253 (69%), Positives = 216/253 (85%), Gaps = 1/253 (0%)

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
           + FIRLDMSE+QE+HEVAK IG+PPGY+GHD+GGQLTK+LK+CPNAVVLFDEVDKAHPDV
Sbjct: 17  QGFIRLDMSEFQERHEVAKFIGSPPGYIGHDEGGQLTKKLKQCPNAVVLFDEVDKAHPDV 76

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
           LT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+   + 
Sbjct: 77  LTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALELSRNRIAE 136

Query: 447 SKSQGSNLD-VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRE 505
           +     N D +TIS++FK+ V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +E
Sbjct: 137 NLGDVQNSDKITISKNFKETVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKE 196

Query: 506 LNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVI 565
           LNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ ++
Sbjct: 197 LNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDLL 256

Query: 566 GKGSFVRLYVQWS 578
             G  +R+ V+ S
Sbjct: 257 PGGCTLRITVEDS 269


>gi|31417113|gb|AAH06257.1| CLPB protein [Homo sapiens]
          Length = 315

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 174/254 (68%), Positives = 218/254 (85%), Gaps = 3/254 (1%)

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
           + FIRLDMSE+QE+HEVAK IG+PPGY+GH++GGQLTK+LK+CPNAVVLFDEVDKAHPDV
Sbjct: 12  QGFIRLDMSEFQERHEVAKFIGSPPGYVGHEEGGQLTKKLKQCPNAVVLFDEVDKAHPDV 71

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKR--TP 444
           LT++LQLFDEGRLTDGKGKTI+CKDAIF+MTSN+AS+EIAQHALQLR+E  E S+     
Sbjct: 72  LTIMLQLFDEGRLTDGKGKTIDCKDAIFIMTSNVASDEIAQHALQLRQEALEMSRNRIAE 131

Query: 445 SISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCR 504
           ++   Q S+  +TIS++FK++V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +
Sbjct: 132 NLGDVQISD-KITISKNFKENVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNK 190

Query: 505 ELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSV 564
           ELNFWAK+A  +HNI ++WD +V  +L DGY+VHYGARSIKHEVER+VV+QLAAA+E+ +
Sbjct: 191 ELNFWAKRAKQRHNITLLWDREVADVLVDGYNVHYGARSIKHEVERRVVNQLAAAYEQDL 250

Query: 565 IGKGSFVRLYVQWS 578
           +  G  +R+ V+ S
Sbjct: 251 LPGGCTLRITVEDS 264


>gi|390351648|ref|XP_003727698.1| PREDICTED: caseinolytic peptidase B protein homolog
           [Strongylocentrotus purpuratus]
          Length = 465

 Score =  342 bits (878), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 170/296 (57%), Positives = 218/296 (73%), Gaps = 18/296 (6%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYI 321
           LE+ L++ IVGQE A+++++  I+RKE GW   + PLVFLFLGSSGIGKTE+AK ++ ++
Sbjct: 143 LEKHLQENIVGQEHAVSLVAQTIRRKELGWQSSEKPLVFLFLGSSGIGKTEMAKAVSTHL 202

Query: 322 HRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDK 381
            + K+ AFIR+DMSEYQ +HEV+K IGAPPGY  HD GGQLT++LKK P AVVLFDEV+K
Sbjct: 203 -KLKETAFIRIDMSEYQNRHEVSKFIGAPPGYCNHDAGGQLTEKLKKTPKAVVLFDEVEK 261

Query: 382 AHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSK 441
           AHPDVLT++LQLFDEGRLTDGKG+T+ C +A+F MTSNL S+ I            +F K
Sbjct: 262 AHPDVLTIMLQLFDEGRLTDGKGETVMCNEALFFMTSNLGSDAIT-----------DFWK 310

Query: 442 RTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
                 K +  +  V I   FK  V+QPILKRHF+RDEFLGRINE V+FLPF+  +L  L
Sbjct: 311 ------KEKKRSGQVQIPDDFKQEVIQPILKRHFKRDEFLGRINETVFFLPFTDVDLLQL 364

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           V RE++ W+K A  +H I + WD  V  +LA+GY V YGARSI HEVER++V+ LA
Sbjct: 365 VTREMDKWSKLANSRHRIRVSWDDSVLKVLANGYKVDYGARSIIHEVERRIVNNLA 420


>gi|76156579|gb|AAX27762.2| SJCHGC04151 protein [Schistosoma japonicum]
          Length = 230

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 161/241 (66%), Positives = 191/241 (79%), Gaps = 13/241 (5%)

Query: 280 ISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQE 339
           +SAAI+RKENGW D+DHPLVFLFLGSSGIGKTELAKQ+A Y+H+D K+ FIR+DMSEYQE
Sbjct: 3   VSAAIRRKENGWYDEDHPLVFLFLGSSGIGKTELAKQVAAYLHKDIKKGFIRIDMSEYQE 62

Query: 340 KHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRL 399
           KHEV+K IG+PPGY+GH++GGQLT+ L  CPNAVVLFDE +KAHPDVLT LLQLFDEGRL
Sbjct: 63  KHEVSKFIGSPPGYVGHEEGGQLTRALATCPNAVVLFDETEKAHPDVLTALLQLFDEGRL 122

Query: 400 TDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTIS 459
           TDG+G TI CKDAIF+MTSN+ S  IA+HA  LR               S     D+ IS
Sbjct: 123 TDGRGATINCKDAIFIMTSNVGSQVIAEHAQDLRH-------------SSGNDEADIEIS 169

Query: 460 RHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNI 519
           R FK+ V++PIL+RHF RDEFLGRINE+VYFLPFS SEL  LV R L  W++KAL +H++
Sbjct: 170 RDFKEKVMRPILRRHFLRDEFLGRINEMVYFLPFSTSELTELVNRSLKSWSEKALKRHSL 229

Query: 520 N 520
            
Sbjct: 230 T 230


>gi|393221748|gb|EJD07232.1| hypothetical protein FOMMEDRAFT_149744 [Fomitiporia mediterranea
           MF3/22]
          Length = 881

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 195/579 (33%), Positives = 291/579 (50%), Gaps = 84/579 (14%)

Query: 62  CMYNNLLFASACSLALTLLECQSIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGW 121
           C  N +LF  +    + +L+   I  +   RA        L  F E +           +
Sbjct: 267 CQNNFVLFQQSVPFLVDILDILGIDKVCAARA--------LSEFPEEASRFTYY----DF 314

Query: 122 TPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVL 181
           T LH+A I+ +   V +LL         DL N +   ++    N           F   +
Sbjct: 315 TLLHLAVIHQRRSFVELLLT-----TCPDLINRIDDRSSYTSDNSLS-------SFAPPI 362

Query: 182 NPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSD--YAEDANIKQILQ 239
            P+      +ALHY  + G+ +++ LL+ +GAD  +KD  G  P +  Y +  + + + +
Sbjct: 363 FPHKYVKDATALHYACLTGDLDIITLLINAGADWNIKDGKGRKPEELLYPKRTDHQHVKR 422

Query: 240 KYAEKYADLQREKEAEER--------RKYP-------------------LEQRLKDRIVG 272
            +++  A  Q E+   E+        R  P                     QR KD    
Sbjct: 423 FFSDLCA-AQEERSKPEKSQPENGDVRDDPEHIDSESSSESCESDDDSSESQRDKDDDDS 481

Query: 273 QESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYIHR--------- 323
                  ++ A++ ++  W D D PL  LFLGSSG+GKTELAKQLA ++H          
Sbjct: 482 PPRVPIPVAHAVRLRKAEWLDPDRPLTMLFLGSSGVGKTELAKQLALFVHGENGLATNKG 541

Query: 324 ------DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFD 377
                 +K++AF+R+DMSEYQ  H    LIG+P  Y+G+ DGG LT  LKK P A+VL D
Sbjct: 542 ERIKELEKEKAFVRIDMSEYQSSHTAYNLIGSPKSYVGYGDGGALTNPLKKNPKAIVLLD 601

Query: 378 EVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGE 437
           E++KAHPDVLT+ L++FD+GR+TD K   I CKDAIF+MTSN+AS++I + + +LR    
Sbjct: 602 EIEKAHPDVLTLFLRVFDDGRITDSKDGVIYCKDAIFIMTSNIASDKIKERSPELR---- 657

Query: 438 EFSKRTPSISKSQG-SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKS 496
               R  + ++++G   L +   R F    + P LK   +RDEF+GRINEI  FLP S+ 
Sbjct: 658 ----RLVAHAETEGRPELYLNAIRGFT-RSIHPQLKCALKRDEFIGRINEIAVFLPLSEE 712

Query: 497 ELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQL 556
           E+ T+V REL  W K+A +KH+I + W  +V   LA  YD++YG RS+ HEV+R  +  +
Sbjct: 713 EIGTVVERELGIWTKRAEEKHSITLSWSEEVVQKLATAYDINYGVRSVTHEVQRIAIHLV 772

Query: 557 AAAHEKSVIGKGSFVRLYVQWSKEV-----SEDSAKGGI 590
           A A     I  G   RL      ++      ED+ K G+
Sbjct: 773 ADAQISGRISAGYKARLSTDELGDIKLDIDPEDAPKDGL 811



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 15/167 (8%)

Query: 90  LFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLG 149
           LF+A      K +   +E +   VN +H  GW PLH A + G V+ V+++L   +NPN  
Sbjct: 99  LFKALVRRDHKSVFRILEVAPSLVNRQHEGGWFPLHAAVLTGDVELVKLIL---SNPNTD 155

Query: 150 DLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLL 209
               T      E + N    LL  E E     +      G S LHY  + GN +++++L+
Sbjct: 156 ---VTAVYEPGESETN--SALLDLESELGICADGTS---GASPLHYACMIGNADIIDVLM 207

Query: 210 KSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEE 256
           + GA P   D     P +Y    N++  L+  A K+ +L  E++A E
Sbjct: 208 RHGALPDSLDGKKQEPIEY---FNLEHDLE-VAIKFRELCAERQARE 250


>gi|390351650|ref|XP_003727699.1| PREDICTED: caseinolytic peptidase B protein homolog
           [Strongylocentrotus purpuratus]
          Length = 423

 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 158/326 (48%), Positives = 210/326 (64%), Gaps = 45/326 (13%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTELAKQLAFYI 321
           LE+ L++ IVGQE A+++++                            KTE+AK ++ ++
Sbjct: 143 LEKHLQENIVGQEHAVSLVAQR--------------------------KTEMAKAVSTHL 176

Query: 322 HRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDK 381
            + K+ AFIR+DMSEYQ +HEV+K IGAPPGY  HD GGQLT++LKK P AVVLFDEV+K
Sbjct: 177 -KLKETAFIRIDMSEYQNRHEVSKFIGAPPGYCNHDAGGQLTEKLKKTPKAVVLFDEVEK 235

Query: 382 AHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSK 441
           AHPDVLT++LQLFDEGRLTDGKG+T+ C +A+F MTSNL S+ I            +F K
Sbjct: 236 AHPDVLTIMLQLFDEGRLTDGKGETVMCNEALFFMTSNLGSDAIT-----------DFWK 284

Query: 442 RTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTL 501
                 K +  +  V I   FK  V+QPILKRHF+RDEFLGRINE V+FLPF+  +L  L
Sbjct: 285 ------KEKKRSGQVQIPDDFKQEVIQPILKRHFKRDEFLGRINETVFFLPFTDVDLLQL 338

Query: 502 VCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHE 561
           V RE++ W+K A  +H I + WD  V   LA  Y+V YGARSI HEVER++V+ LA  H+
Sbjct: 339 VTREMDKWSKLANSRHGIKVSWDNSVLKALAASYNVDYGARSIIHEVERKIVNNLARLHD 398

Query: 562 KSVIGKGSFVRLYVQWSKEVSEDSAK 587
           +      SF R+ V  +++VS  S +
Sbjct: 399 EYGDIVKSF-RISVVQNRDVSRLSQR 423


>gi|393221747|gb|EJD07231.1| hypothetical protein FOMMEDRAFT_149742 [Fomitiporia mediterranea
           MF3/22]
          Length = 812

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 171/442 (38%), Positives = 245/442 (55%), Gaps = 80/442 (18%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSD--YAEDANIKQILQKYA------ 242
           +ALHY  +  + +++ LL+K+GAD  +KD  G  P D  Y +  N   I   ++      
Sbjct: 350 TALHYACLIEDLDIITLLIKAGADWNIKDYRGRKPEDLFYPKSENYDHIKNVFSCLCVAE 409

Query: 243 -EK----------YADLQREKEAEE--------------RRKYPL--------------- 262
            EK          + D+   KEAE                 K PL               
Sbjct: 410 EEKRKMAVEESVCHGDVNAWKEAERIGMNAWSDWGECHANTKEPLLEVKREECVDVPPPK 469

Query: 263 ---------EQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGKTEL 313
                    E+ L++ +VGQ   I  ++ A++ +E  W D D PL  LFLGSSG+GKTEL
Sbjct: 470 PPAQSFLSLEKVLEETLVGQRGPIRTVANAVRLREGKWVDPDRPLTMLFLGSSGVGKTEL 529

Query: 314 AKQLAFYIHR---------------DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDD 358
           AKQLA +IH                +K+ AF+R+DMSEYQE+H    LIGAP  Y+G+ D
Sbjct: 530 AKQLALFIHGQNGLSTNNGDRVKQLEKEHAFVRIDMSEYQERHSAYNLIGAPKSYVGYGD 589

Query: 359 GGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTS 418
           GG LT+ LKK P A+VL DE++KAHPDVL + LQ+FD+GR+TD K   + CKDAIF+MTS
Sbjct: 590 GGALTQPLKKNPKAIVLLDEIEKAHPDVLNMFLQVFDDGRITDSKDGVVCCKDAIFIMTS 649

Query: 419 NLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRD 478
           N+AS+EI + + +LR    E    T +  + +     + + R F    ++PILK+  +RD
Sbjct: 650 NIASDEIKESSSELR----ELVALTETEDRPESY---LHVIREFT-RSIRPILKQSLKRD 701

Query: 479 EFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVH 538
           EF+GRINEI  FLP S+ E+  +V REL  WA++A ++H I + W  +V   LA  Y+++
Sbjct: 702 EFIGRINEIAVFLPLSEEEIEIVVERELGVWARRAEEEHGIKLSWSNEVVKKLASAYEIN 761

Query: 539 YGARSIKHEVERQVVSQLAAAH 560
           YG RS+ +EV+R  +  +A A 
Sbjct: 762 YGVRSVANEVQRVAIHLVADAQ 783



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 24/205 (11%)

Query: 27  RGFQSSKLFYTT-QSTQADFKSCLSVFPKIRQSNNTCMYN--NLLFASACSLALTLLECQ 83
           RG  S +  YT  ++++ + + CL   P    ++ T   +  +      CSL   + +  
Sbjct: 42  RGITSLESLYTQLRASRLERRRCLGGIPSRGPASETDSEDTTSTFGVYDCSLDSAVQQ-- 99

Query: 84  SIKDLTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAG 143
                 L RA      + +   ++     V+ RH  GW PLH A ++G +D +R++L   
Sbjct: 100 ------LCRAIVRRDCEAVSCMLKAVPCLVSKRHRGGWFPLHAAVLSGDIDLIRLILSC- 152

Query: 144 ANPNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTE 203
             PN     N V+       + P    L+RE      L+ + T  G   LHY  + GN +
Sbjct: 153 --PNTD--VNAVYEVGTTSVLFPD---LERELG----LHVDGT-TGARPLHYACMIGNAD 200

Query: 204 VVELLLKSGADPTVKDNSGHIPSDY 228
           ++ LL   GA    +D     P DY
Sbjct: 201 IINLLTHHGALLNARDEWQREPIDY 225


>gi|46446362|ref|YP_007727.1| endopeptidase Clp ATP-binding chain [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|54035763|sp|Q6MD97.1|CLPB_PARUW RecName: Full=Chaperone protein ClpB
 gi|46400003|emb|CAF23452.1| probable endopeptidase Clp ATP-binding chain [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 868

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 146/345 (42%), Positives = 223/345 (64%), Gaps = 29/345 (8%)

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           I QI+ K+         E EAE  R   LE  L+ R+VGQE A++ +S AI+R  +G +D
Sbjct: 537 IAQIVSKWTGIPVHKMLEGEAE--RLLHLENELEKRVVGQEIAVSAVSEAIRRSRSGLSD 594

Query: 294 DDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPG 352
            + P+ VFLFLG +G+GKTELAK LAF +  ++ EA IRLDMSEY EKH V+KLIG+PPG
Sbjct: 595 PNRPMGVFLFLGPTGVGKTELAKALAFQLF-NQDEALIRLDMSEYMEKHTVSKLIGSPPG 653

Query: 353 YLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDA 412
           Y+G+++GGQLT+ L++ P AVVLFDE++KAHPDV  +LLQ+FD+GRLTD KG+ + CK+A
Sbjct: 654 YIGYEEGGQLTEALRRRPYAVVLFDEIEKAHPDVFNILLQVFDDGRLTDSKGRVVNCKNA 713

Query: 413 IFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILK 472
           +F+MTSN+ S+ + +   Q                  QG   D  +       V+ P++K
Sbjct: 714 LFIMTSNIGSDLLLEKMEQ----------------NKQGLAKDEIML------VLDPVIK 751

Query: 473 RHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA 532
           +HF R EF+ R+++I+ F+P  + ++  +V  +LN  AK+  D+ ++ ++W       LA
Sbjct: 752 KHF-RPEFINRLDDILPFVPLREHDMEKIVVIQLNLLAKRLKDR-DVELMWTPQALAHLA 809

Query: 533 -DGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            +GYD H+GAR +K  ++++V++QL+ A  +  I   S ++L ++
Sbjct: 810 KEGYDPHFGARPLKRYIQQEVINQLSTAILEGKIPPHSHIKLELE 854


>gi|297621075|ref|YP_003709212.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Waddlia
           chondrophila WSU 86-1044]
 gi|297376376|gb|ADI38206.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Waddlia
           chondrophila WSU 86-1044]
 gi|337292299|emb|CCB90336.1| chaperone protein ClpB [Waddlia chondrophila 2032/99]
          Length = 869

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/344 (41%), Positives = 215/344 (62%), Gaps = 29/344 (8%)

Query: 234 IKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTD 293
           I QI+ K+         E EAE  +   LE+ +  R++GQE  +  +S AI+R  +G +D
Sbjct: 536 IAQIVSKWTGIPVSKMMEGEAE--KLLHLEKEIGKRVIGQEMGVKAVSEAIRRSRSGLSD 593

Query: 294 DDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPG 352
            + P+  FLFLG +G+GKTELAK LA  +  D++EA IRLDMSEY EKH V+KLIG+PPG
Sbjct: 594 PNRPIGAFLFLGPTGVGKTELAKSLAEQLF-DQEEAMIRLDMSEYMEKHAVSKLIGSPPG 652

Query: 353 YLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDA 412
           Y+G+D+GGQLT+ L++ P  VVL DEV+KAH DV  +LLQ+FD+GRLTD KG+ + CK+A
Sbjct: 653 YVGYDEGGQLTEALRRRPYTVVLLDEVEKAHHDVFNILLQIFDDGRLTDSKGRVVNCKNA 712

Query: 413 IFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILK 472
           +F+MTSNL S+ + Q   Q+ K+    +K   SI K                 +++P+++
Sbjct: 713 LFIMTSNLGSDLLLQ---QMEKDPSSITKE--SIVK-----------------LLEPVIR 750

Query: 473 RHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA 532
           +HF R EF+ R++EI+ FLP  + ++  +V  +L    ++  D+    + W  DV   LA
Sbjct: 751 QHF-RPEFINRLDEILPFLPLQQKDMEKIVMIQLQHLKRRMADRET-KLTWSDDVVKFLA 808

Query: 533 D-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           + GYD  +GAR +K  ++ +VV++L+ A  +  I   S V L +
Sbjct: 809 NKGYDPSFGARPLKRLIQHEVVNKLSTAILEGKIPSNSTVHLML 852


>gi|338733671|ref|YP_004672144.1| chaperone protein ClpB [Simkania negevensis Z]
 gi|336483054|emb|CCB89653.1| chaperone protein ClpB [Simkania negevensis Z]
          Length = 877

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/309 (43%), Positives = 202/309 (65%), Gaps = 27/309 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   LE  L+ R+VGQ  A+  +S AI+R   G +D + PL  FLF+G +G+GKT
Sbjct: 554 EGEADRLLSLESSLEKRVVGQHFAVEAVSEAIRRSRAGLSDPNRPLGAFLFVGPTGVGKT 613

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  +++EA  RLDMSEY EKH V+KLIG+PPGY+G+D+GGQLT+ L++ P 
Sbjct: 614 ELAKTLAEELF-NQEEAITRLDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLTEALRRRPY 672

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAH DV  +LLQ+FD+GR+TD KG+ + C+ A+F+MTSNL S ++  +   
Sbjct: 673 SVVLFDEIEKAHHDVFNILLQMFDDGRITDSKGRVVNCRHALFIMTSNLGSEQLLDYI-- 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                           K +GS+L    S+     +V P++K HF R EF+ R++EI+ FL
Sbjct: 731 ----------------KQKGSDL----SKEAILQIVDPVIKNHF-RPEFINRLDEILPFL 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
           P  + ++  +V  +L+   KK LD+ +I++ +   V   LA +GYD ++GAR +K  +++
Sbjct: 770 PLQEKDMEKIVLIQLD-RVKKRLDERDISLDYSPQVLAYLAKEGYDPYFGARPLKRLIQQ 828

Query: 551 QVVSQLAAA 559
            VV++L+ A
Sbjct: 829 TVVNELSQA 837


>gi|282889749|ref|ZP_06298288.1| hypothetical protein pah_c004o115 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500323|gb|EFB42603.1| hypothetical protein pah_c004o115 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 479

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 203/309 (65%), Gaps = 27/309 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE+ L+ R+VGQ+ A+  IS AI+R  +G +D   P+  FLFLG +G+GKT
Sbjct: 169 EGEAAKLLHLEKELEKRVVGQDIAVKAISEAIRRSRSGLSDPGRPMGAFLFLGPTGVGKT 228

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  ++ EA IRLDMSEY EKH V+KLIG+PPGY+G+++GGQLT+ L++ P 
Sbjct: 229 ELAKALAEQLF-NQDEALIRLDMSEYMEKHSVSKLIGSPPGYVGYEEGGQLTEALRRRPY 287

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVL DE++KAH DV  +LLQ+FD+GR+TD KG+ + CK+A+F+MTSNL S ++ +   Q
Sbjct: 288 AVVLLDEIEKAHHDVFNILLQIFDDGRITDSKGRVVNCKNALFIMTSNLGSGQLLEKMEQ 347

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                            S   N ++ ++      ++ P++K HF R EF+ R+++I+ FL
Sbjct: 348 ----------------ASSAINKEMILA------ILDPVIKAHF-RPEFINRLDDILPFL 384

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P  K ++  +V  +L   +K+  +K  +++ W  +V + LA+ GYD +YGAR +K  +++
Sbjct: 385 PLRKEDMQKIVLIQLQRLSKRLAEKQ-VSLKWTPEVVSQLAEMGYDPYYGARPLKRLIQQ 443

Query: 551 QVVSQLAAA 559
           ++V+ L+ A
Sbjct: 444 EIVNMLSMA 452


>gi|338175969|ref|YP_004652779.1| chaperone protein ClpB [Parachlamydia acanthamoebae UV-7]
 gi|336480327|emb|CCB86925.1| chaperone protein ClpB [Parachlamydia acanthamoebae UV-7]
          Length = 865

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 203/309 (65%), Gaps = 27/309 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE+ L+ R+VGQ+ A+  IS AI+R  +G +D   P+  FLFLG +G+GKT
Sbjct: 555 EGEAAKLLHLEKELEKRVVGQDIAVKAISEAIRRSRSGLSDPGRPMGAFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  ++ EA IRLDMSEY EKH V+KLIG+PPGY+G+++GGQLT+ L++ P 
Sbjct: 615 ELAKALAEQLF-NQDEALIRLDMSEYMEKHSVSKLIGSPPGYVGYEEGGQLTEALRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVL DE++KAH DV  +LLQ+FD+GR+TD KG+ + CK+A+F+MTSNL S ++ +   Q
Sbjct: 674 AVVLLDEIEKAHHDVFNILLQIFDDGRITDSKGRVVNCKNALFIMTSNLGSGQLLEKMEQ 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                            S   N ++ ++      ++ P++K HF R EF+ R+++I+ FL
Sbjct: 734 ----------------ASSAINKEMILA------ILDPVIKAHF-RPEFINRLDDILPFL 770

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P  K ++  +V  +L   +K+  +K  +++ W  +V + LA+ GYD +YGAR +K  +++
Sbjct: 771 PLRKEDMQKIVLIQLQRLSKRLAEKQ-VSLKWTPEVVSQLAEMGYDPYYGARPLKRLIQQ 829

Query: 551 QVVSQLAAA 559
           ++V+ L+ A
Sbjct: 830 EIVNMLSMA 838


>gi|260806619|ref|XP_002598181.1| hypothetical protein BRAFLDRAFT_204705 [Branchiostoma floridae]
 gi|229283453|gb|EEN54193.1| hypothetical protein BRAFLDRAFT_204705 [Branchiostoma floridae]
          Length = 178

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 118/172 (68%), Positives = 143/172 (83%), Gaps = 1/172 (0%)

Query: 302 FLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQ 361
           ++  S IGKTELAKQ+A Y+H+D K+ F+R+DMSEYQEKHEVAK IG+PPGY+GH+ GGQ
Sbjct: 5   YVCLSLIGKTELAKQIANYMHKDVKKGFVRMDMSEYQEKHEVAKFIGSPPGYVGHEQGGQ 64

Query: 362 LTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLA 421
           LTK+LK+CPNAVVLFDEV+KAHPDVLT++LQLFDEGRLTDGKGKT+ECKDAIFVMTSNLA
Sbjct: 65  LTKKLKQCPNAVVLFDEVEKAHPDVLTIMLQLFDEGRLTDGKGKTVECKDAIFVMTSNLA 124

Query: 422 SNEIAQHALQLRKEGEE-FSKRTPSISKSQGSNLDVTISRHFKDHVVQPILK 472
           S  IA H LQLRKE +E +++R     +       +T+SR FK+ VV PILK
Sbjct: 125 SEVIADHGLQLRKEAQEVWAQRRQETDQDVLLTERITVSRQFKEKVVYPILK 176


>gi|434389225|ref|YP_007099836.1| ATP-dependent chaperone ClpB [Chamaesiphon minutus PCC 6605]
 gi|428020215|gb|AFY96309.1| ATP-dependent chaperone ClpB [Chamaesiphon minutus PCC 6605]
          Length = 907

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 144/371 (38%), Positives = 220/371 (59%), Gaps = 30/371 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           D +I +I+ K+      + R   +E ++   LE  L +R++GQ  A++ +SAAI+R   G
Sbjct: 545 DGDIAEIVAKWT--GIPVNRLLASERQKLLQLESHLHNRVIGQNEAVSAVSAAIRRARAG 602

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLF+G +G+GKTELA+ LA ++  D +EA +RLDMSEY EKH V++L+GA
Sbjct: 603 MKDPNRPIGSFLFMGPTGVGKTELARALAEFLF-DSEEAMVRLDMSEYMEKHAVSRLVGA 661

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+GH+DGGQLT+ +++ P +VVLFDEV+KAHPDV  +LLQ+ D+GR+TD KGKT+  
Sbjct: 662 PPGYVGHEDGGQLTEAVRRHPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSKGKTVSF 721

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
            + + VMTSN+AS++I    L             P   K+Q  NLD       ++ V   
Sbjct: 722 ANTVIVMTSNIASDQIITTLL------------NPDRDKNQ--NLD------LREQVTST 761

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +L  HF R EF+ R++E+  F P  K+EL  +V  +++   ++ L    I I      + 
Sbjct: 762 LLS-HF-RPEFINRVDELTIFEPLKKTELRQIVTLQIH-QIERMLADQKIKIHLSTSAQD 818

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGS--FVRLYVQWSKEVSEDSA 586
            LAD GYD  YGAR ++  ++R++ + +A    ++  G+G   FV   V  S  V   + 
Sbjct: 819 YLADVGYDPIYGARPLRRAIQRELQNPIATKILETTFGEGDTIFVDCVVSSSASVETRTL 878

Query: 587 KGGIIKLKVKK 597
             G  + K +K
Sbjct: 879 TFGTKQTKSQK 889


>gi|390364093|ref|XP_003730519.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory
           ankyrin repeat subunit C-like [Strongylocentrotus
           purpuratus]
          Length = 1400

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 174/261 (66%), Gaps = 44/261 (16%)

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSGIGK 310
           +  +++R+   LE+ LK+ IVGQ  A+++++    R+                      K
Sbjct: 236 QNPSKDRKLTKLERHLKENIVGQTHAVSLVA----RR----------------------K 269

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TE+ K ++ ++ + K+  FIR+DMSEYQ++H+V K  G+PPGY+GHDDGGQLT++LKK P
Sbjct: 270 TEMVKAVSTHL-KLKEAGFIRIDMSEYQQQHQVNKFTGSPPGYIGHDDGGQLTEKLKKSP 328

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL 430
           NAVVLFDEV+KAH DVLT+LLQLFDEGRLTDGKG+T+ C DAIF MTSNL S+ I     
Sbjct: 329 NAVVLFDEVEKAHRDVLTILLQLFDEGRLTDGKGETVRCNDAIFFMTSNLGSDAIT---- 384

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                  +F K+     K  G    V I  +FK  V+QPILKRHF+RDEFLGRINE V+F
Sbjct: 385 -------DFWKKE---KKQSGQ---VKIPDNFKQEVIQPILKRHFQRDEFLGRINETVFF 431

Query: 491 LPFSKSELHTLVCRELNFWAK 511
           LPF++ +L  LV RE++ W+K
Sbjct: 432 LPFTEDDLVQLVSREMDKWSK 452



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 9/147 (6%)

Query: 88  LTLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGAN-- 145
           +T  R A  G+  E+  ++   K + NM    GWTPLH AA+NG+ D ++ L  +GA+  
Sbjct: 587 ITPLRMAVAGNHVEVTKYLLRQKAEPNMTDHTGWTPLHSAALNGRADIIKCLKTSGADVT 646

Query: 146 PNLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTF-------LGFSALHYGVV 198
                 +  +   +    ++  + L + E   N++     ++        GF+ALH   +
Sbjct: 647 KQTDRGYTPLFLASLNGHVDCVKELFEIEAGTNELEAERCSYQLNMVDDAGFAALHCAAL 706

Query: 199 AGNTEVVELLLKSGADPTVKDNSGHIP 225
            G+ ++ ++LL+ GA P  K  SG +P
Sbjct: 707 KGHAKITKMLLQEGASPQQKSESGMVP 733



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 9/140 (6%)

Query: 89  TLFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNL 148
           ++ +AA  G  +E++  ++ ++  +  R       LH A+ NG ++ V++L+EA    N 
Sbjct: 522 SIIKAAYNGELEEVRRHLQENREAIYERTQADRNALHAASTNGHLEIVQLLVEANLTING 581

Query: 149 GDL--FNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMT-FLGFSALHYGVVAGNTEVV 205
           GD      +    A   +   + LL+++ E      PNMT   G++ LH   + G  +++
Sbjct: 582 GDAAGITPLRMAVAGNHVEVTKYLLRQKAE------PNMTDHTGWTPLHSAALNGRADII 635

Query: 206 ELLLKSGADPTVKDNSGHIP 225
           + L  SGAD T + + G+ P
Sbjct: 636 KCLKTSGADVTKQTDRGYTP 655



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 74/192 (38%), Gaps = 48/192 (25%)

Query: 90   LFRAARYGSAKELKTFIENSKLDVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANP--- 146
            L  AA  G A+ L T +E +  DVN +     TP+ +AA++G    V  L+   A+P   
Sbjct: 1045 LHIAASNGFAEPLATLLEYNA-DVNAQSNHNSTPILLAAVHGHQSCVEKLIAHDADPMKR 1103

Query: 147  -NLGDLFNTVHRTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVV 205
             N GD    VH  A   +++  E +L  +     + + N    G   LHY    GN + V
Sbjct: 1104 DNDGDSL--VHHAALGGRLDTLEYVLDLDGMSELISSKNNA--GHLPLHYAAREGNKDCV 1159

Query: 206  ELLLK-----------------------------------SGADPTVKDNSG----HIPS 226
            ELLL                                     GADPT +DN G    H+ S
Sbjct: 1160 ELLLALGMSQEEGEESNHNSTPLLLAAEYGHQSCVEKLVAHGADPTKRDNDGDSLVHVAS 1219

Query: 227  DYAEDANIKQIL 238
                   +K +L
Sbjct: 1220 SGGSLETLKYVL 1231



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 24/130 (18%)

Query: 112  DVNMRHPLGWTPLHVAAINGKVDNVRVLLEAGANPNLGDLFNTV---------HRTAAEK 162
            DVN  +  G T LH+AA NG  + +  LLE  A+ N     N+          H++  EK
Sbjct: 1033 DVNKANNTGNTALHIAASNGFAEPLATLLEYNADVNAQSNHNSTPILLAAVHGHQSCVEK 1092

Query: 163  KMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLK-SGADPTV--KD 219
             +      +KR+++            G S +H+  + G  + +E +L   G    +  K+
Sbjct: 1093 LIAHDADPMKRDND------------GDSLVHHAALGGRLDTLEYVLDLDGMSELISSKN 1140

Query: 220  NSGHIPSDYA 229
            N+GH+P  YA
Sbjct: 1141 NAGHLPLHYA 1150


>gi|224157429|ref|XP_002196426.1| PREDICTED: caseinolytic peptidase B protein homolog, partial
           [Taeniopygia guttata]
          Length = 235

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 117/181 (64%), Positives = 146/181 (80%), Gaps = 1/181 (0%)

Query: 397 GRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD- 455
           GRLTDGKGKTI+CKDAIF+MTSN+AS EIAQHALQLR+E  E SK+  + +       D 
Sbjct: 1   GRLTDGKGKTIDCKDAIFIMTSNVASEEIAQHALQLRQEAMEMSKKRIAENLEDVQITDK 60

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
           +TIS+ FK+ V++PILK HFRRDEFLGRINEIVYFLPF  SEL  LV +ELNFWAKKA  
Sbjct: 61  ITISKQFKEKVIRPILKAHFRRDEFLGRINEIVYFLPFCHSELIQLVNKELNFWAKKAKA 120

Query: 516 KHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           +HNI + WD +V  +LADGY++HYGARSIKHEVER+VV+QLAAA+E+ ++ +G  +R+ V
Sbjct: 121 RHNITLQWDREVMDVLADGYNLHYGARSIKHEVERRVVNQLAAAYEQDLLPQGCTLRIIV 180

Query: 576 Q 576
           +
Sbjct: 181 E 181


>gi|421076357|ref|ZP_15537350.1| ATP-dependent chaperone ClpB [Pelosinus fermentans JBW45]
 gi|392525739|gb|EIW48872.1| ATP-dependent chaperone ClpB [Pelosinus fermentans JBW45]
          Length = 865

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/326 (41%), Positives = 195/326 (59%), Gaps = 35/326 (10%)

Query: 254 AEERRKYP-LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A ER K   LE  L  R+VGQE A+  +S AI R   G  D + P+  F+FLG +G+GKT
Sbjct: 557 AGEREKLANLESILHTRVVGQEDAVQAVSEAIIRARAGVKDPNRPIGSFIFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D++ + IR+DMSEY EKH VA+LIGAPPGY+GHD+GGQLT+ +++ P 
Sbjct: 617 ELAKTLAEVLFDDER-SMIRVDMSEYMEKHTVARLIGAPPGYVGHDEGGQLTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  VLLQ+ D+GRLTDGKG+T+  K+ + +MTSNL S EI Q+  +
Sbjct: 676 SVILLDEIEKAHSDVFNVLLQILDDGRLTDGKGRTVNFKNTVVIMTSNLGSAEILQNEFE 735

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             KE                               V  +LK HF R EFL RI++I+ F 
Sbjct: 736 RAKEK------------------------------VLSMLKSHF-RPEFLNRIDDIIVFN 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
             ++ ++  +    L    K+   + NI +VWD  V T+L+  GYD  +GAR ++ ++ R
Sbjct: 765 ALTEQQVSKIAGILLENLNKRLQKQMNITLVWDEAVLTLLSKKGYDSAFGARPLRRQISR 824

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            + ++L+    +  I +G+ V+L  Q
Sbjct: 825 SIETELSKKIVRGEIMEGNTVKLKAQ 850


>gi|392959314|ref|ZP_10324798.1| ATP-dependent chaperone ClpB [Pelosinus fermentans DSM 17108]
 gi|421052821|ref|ZP_15515807.1| ATP-dependent chaperone ClpB [Pelosinus fermentans B4]
 gi|421059333|ref|ZP_15521940.1| ATP-dependent chaperone ClpB [Pelosinus fermentans B3]
 gi|421066891|ref|ZP_15528434.1| ATP-dependent chaperone ClpB [Pelosinus fermentans A12]
 gi|421070225|ref|ZP_15531359.1| ATP-dependent chaperone ClpB [Pelosinus fermentans A11]
 gi|392442779|gb|EIW20349.1| ATP-dependent chaperone ClpB [Pelosinus fermentans B4]
 gi|392448403|gb|EIW25592.1| ATP-dependent chaperone ClpB [Pelosinus fermentans A11]
 gi|392452529|gb|EIW29463.1| ATP-dependent chaperone ClpB [Pelosinus fermentans A12]
 gi|392456697|gb|EIW33439.1| ATP-dependent chaperone ClpB [Pelosinus fermentans DSM 17108]
 gi|392459135|gb|EIW35576.1| ATP-dependent chaperone ClpB [Pelosinus fermentans B3]
          Length = 865

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/326 (41%), Positives = 194/326 (59%), Gaps = 35/326 (10%)

Query: 254 AEERRKYP-LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A ER K   LE  L  R+VGQE A+  +S AI R   G  D + P+  F+FLG +G+GKT
Sbjct: 557 AGEREKLANLESILHTRVVGQEDAVQAVSEAIIRARAGVKDPNRPIGSFIFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D++ + IR+DMSEY EKH VA+LIGAPPGY+GHD+GGQLT+ +++ P 
Sbjct: 617 ELAKTLAEVLFDDER-SMIRVDMSEYMEKHTVARLIGAPPGYVGHDEGGQLTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  VLLQ+ D+GRLTDGKG+T+  K+ + +MTSNL S EI Q+  +
Sbjct: 676 SVILLDEIEKAHSDVFNVLLQILDDGRLTDGKGRTVNFKNTVVIMTSNLGSAEILQNEFE 735

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             KE                               V  +LK HF R EFL RI++I+ F 
Sbjct: 736 RAKEK------------------------------VLSMLKSHF-RPEFLNRIDDIIVFN 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
             ++ ++  +    L    K+   + NI +VWD  V T+L+  GYD  +GAR ++ ++ R
Sbjct: 765 ALTEQQVSKIAGILLENLNKRLQKQMNITLVWDEAVLTLLSKKGYDSAFGARPLRRQISR 824

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            + ++L+    +  I +G  V+L  Q
Sbjct: 825 SIETELSKKIVRGEIMEGGTVKLKAQ 850


>gi|281205439|gb|EFA79630.1| AAA ATPase domain-containing protein [Polysphondylium pallidum
           PN500]
          Length = 880

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 197/307 (64%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E++R   L + L +R+VGQ+ A++ ++ A+ R   G    + PL  FLFLG +G+GKT
Sbjct: 555 QTEKQRTLSLGKHLHERVVGQDEAVDAVADAVLRSRAGLARLNQPLGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+K   IR+DMSEY E+H VA+LIGAPPGY+G+D GGQLT+ +++ P 
Sbjct: 615 ELAKALAVELFDDEKH-MIRIDMSEYMEQHAVARLIGAPPGYVGYDQGGQLTEAVRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAHP V  VLLQ+ D+GRLTDG+G+TI+  + + ++TSNL S  +      
Sbjct: 674 SVVLFDEVEKAHPQVWNVLLQVLDDGRLTDGQGRTIDFSNVVIILTSNLGSQYL------ 727

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         +++S     +  +S+H KD V+  + ++HF R EFL R+++IV F 
Sbjct: 728 --------------LAESNAEIFNTGLSQHVKDQVINEV-RKHF-RPEFLNRLDDIVVFS 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P +K+ L +++  +L    K+ L+  NI++ V    +++IL   YD  YGAR +K  +E+
Sbjct: 772 PLTKANLESIITLQLRSVTKR-LESQNISVNVSKPAMDSILKSAYDPSYGARPLKRYLEK 830

Query: 551 QVVSQLA 557
            +V++L+
Sbjct: 831 HIVTELS 837


>gi|372221869|ref|ZP_09500290.1| ATP-dependent chaperone ClpB [Mesoflavibacter zeaxanthinifaciens
           S86]
          Length = 866

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/309 (43%), Positives = 191/309 (61%), Gaps = 30/309 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLQLENVLHKRVVGQEEAIEAVSDAIRRSRAGLQDTKKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKTLAAYLF-DDENAITRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+AI +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNAIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F       S ++ + ++V             +LK+   R EFL RI++IV F 
Sbjct: 725 -----EKFESANDIYSATEAARVEVL-----------GLLKKSI-RPEFLNRIDDIVMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL---ADGYDVHYGARSIKHEV 548
           P S+  +  +V  ++    KK L K NI +  D   E I    A GYD  YGAR IK  V
Sbjct: 768 PLSRENIKAIVGLQIESL-KKMLAKQNITL--DATAEAIAYLSAKGYDPQYGARPIKRLV 824

Query: 549 ERQVVSQLA 557
           +++V+++L+
Sbjct: 825 QKEVLNKLS 833


>gi|328871453|gb|EGG19823.1| AAA ATPase domain-containing protein [Dictyostelium fasciculatum]
          Length = 892

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/307 (42%), Positives = 195/307 (63%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E +R   L   L  R+VGQ  A++ ++ A+ R + G    + PL  FLFLG +G+GKT
Sbjct: 553 QTERQRTLHLADHLHQRVVGQYEAVDAVADAVMRSKAGLARLNQPLGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA+ +  D+K   +R+DMSE+ E+H VA+LIGAPPGY+G+D+GGQL++ +++ P 
Sbjct: 613 ELAKALAYELFDDEKH-MVRIDMSEFMEQHSVARLIGAPPGYVGYDEGGQLSEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAHP V  VLLQ+ D+GRLTDGKGKT++  + + +MTSNL S  +   A Q
Sbjct: 672 SVVLFDEVEKAHPQVWNVLLQVLDDGRLTDGKGKTVDFSNVVIIMTSNLGSQYLLAEA-Q 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L                        TIS+H KD V+  + ++HF R EFL R++++V F 
Sbjct: 731 LE-----------------------TISQHVKDSVMGEV-RKHF-RPEFLNRLDDMVIFS 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
           P SK  L ++V  +L    K+ L++ NI+I  D+  ++ IL   YD  YGAR +K  +E+
Sbjct: 766 PLSKKNLESIVTLQLGSVTKR-LEQQNISIKVDLKAIDYILQQAYDPVYGARPLKRFLEK 824

Query: 551 QVVSQLA 557
            +V++L+
Sbjct: 825 NIVTELS 831


>gi|330795076|ref|XP_003285601.1| hypothetical protein DICPUDRAFT_46211 [Dictyostelium purpureum]
 gi|325084423|gb|EGC37851.1| hypothetical protein DICPUDRAFT_46211 [Dictyostelium purpureum]
          Length = 882

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 202/307 (65%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E++R   L + L  R+VGQ+ A++ ++ A+ R ++G   ++ PL  FLFLG +G+GKT
Sbjct: 555 QTEKQRLLHLGEHLHKRVVGQDEAVDAVADAVLRSKSGLARENQPLGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LAF +  D+K   IR+DMSEY E+H V++LIGAPPGY+G+D GGQLT+ +++ P 
Sbjct: 615 ELAKALAFELFDDEKH-MIRIDMSEYMEQHSVSRLIGAPPGYVGYDQGGQLTEAVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAH  V  VLLQ+ D+GRLTDG+G+T++  + + +MTSNL S    Q+ LQ
Sbjct: 674 SVVLFDEVEKAHQQVWNVLLQVLDDGRLTDGQGRTVDFSNVVIIMTSNLGS----QYILQ 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            +   + FS                T+S+  KD V   + ++HF R EFL R+++I+ F 
Sbjct: 730 EQSNQDNFS----------------TLSQSCKDKVTNEV-RKHF-RPEFLNRLDDIIVFS 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
           P SK+ LH ++  +L    K+ L+  N+++  + D +++I+A  YD  +GAR ++  +E+
Sbjct: 772 PLSKNNLHGIINLQLQSVEKR-LEAQNMSMTVEKDALDSIIAKSYDAIFGARPLRRYLEK 830

Query: 551 QVVSQLA 557
            +V++L+
Sbjct: 831 NIVTELS 837


>gi|305667220|ref|YP_003863507.1| putative heat shock ClpB protein [Maribacter sp. HTCC2170]
 gi|88708154|gb|EAR00392.1| putative heat shock ClpB protein [Maribacter sp. HTCC2170]
          Length = 866

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/307 (42%), Positives = 191/307 (62%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE+ L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLKLEEVLHKRVVGQEEAIQAVSDAIRRSRAGLQDTKKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKTLAAYLF-DDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F       S S+ + ++V              L R   R EFL RI++I+ F 
Sbjct: 725 -----EKFENNKDIHSASETARIEVL------------GLLRKTIRPEFLNRIDDIIMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P SKS++  +V  ++    KK L K +I I    +  T LA+ GYD  YGAR IK  +++
Sbjct: 768 PLSKSDITQIVVLQIE-QLKKMLSKQHITIDATNEAITHLANKGYDPQYGARPIKRVIQK 826

Query: 551 QVVSQLA 557
           +V++ L+
Sbjct: 827 EVLNSLS 833


>gi|269836474|ref|YP_003318702.1| ATP-dependent chaperone ClpB [Sphaerobacter thermophilus DSM 20745]
 gi|269785737|gb|ACZ37880.1| ATP-dependent chaperone ClpB [Sphaerobacter thermophilus DSM 20745]
          Length = 870

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/316 (42%), Positives = 198/316 (62%), Gaps = 32/316 (10%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +E RL  R+VGQ+ AI  +S AI+R  +G  D + PL  F+FLG +G+GKTELA+ LA +
Sbjct: 566 MESRLHQRVVGQDEAIEAVSNAIRRARSGLQDPNRPLGSFIFLGPTGVGKTELARALAEF 625

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D++ A +R+DMSEYQE+H VA+LIGAPPGY+G+D+GGQLT+ +++ P AVVLFDE++
Sbjct: 626 LFDDER-AMVRIDMSEYQERHTVARLIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIE 684

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHP+V  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  I     Q    GE   
Sbjct: 685 KAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSAYIQAAGPQ----GEAEM 740

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
           +R                 R F+       L+ HF R EFL RI+EIV F   ++  L  
Sbjct: 741 RR-----------------RVFE------ALRNHF-RPEFLNRIDEIVIFHALTREHLAM 776

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  +L   A++  D+ NI +      +  LAD GYD  +GAR +K  ++R+++ +LA A
Sbjct: 777 IVDIQLRQVAERLADR-NITLQVTQRAKEWLADRGYDPVFGARPLKRTIQRELLDRLAKA 835

Query: 560 HEKSVIGKGSFVRLYV 575
             +  I +G  V + V
Sbjct: 836 LLEGKIHEGDTVTVDV 851


>gi|221632469|ref|YP_002521690.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
 gi|221157168|gb|ACM06295.1| chaperone clpB 1 [Thermomicrobium roseum DSM 5159]
          Length = 870

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/298 (41%), Positives = 194/298 (65%), Gaps = 32/298 (10%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +E+RL +R+VGQ+ A+  +S AI+R   G  D + PL  F+FLG +G+GKTELA+ LA +
Sbjct: 566 MEERLHERVVGQDEAVRAVSNAIRRARAGLQDPNRPLGSFIFLGPTGVGKTELARALAEF 625

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D++ A +R+DMSEYQE+H V++LIGAPPGY+G+++GGQLT+ +++ P +VVLFDE++
Sbjct: 626 LFDDER-AMVRIDMSEYQERHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVVLFDEIE 684

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHP+V  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  I   AL   +E E + 
Sbjct: 685 KAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSEYI--QALLPHREEEAYE 742

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
           +                        V+Q + + HF R EFL RI+EI+ F P ++ +L  
Sbjct: 743 R------------------------VMQAV-RAHF-RPEFLNRIDEIIMFRPLTREQLSQ 776

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    ++ L + NI +   +  +  LA+ GYD  YGAR +K  ++R+++  LA
Sbjct: 777 IVDIQLR-QVRQRLKQRNITLQVTLRAKEWLAERGYDPVYGARPLKRVIQRELLDPLA 833


>gi|254561541|ref|YP_003068636.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
 gi|254268819|emb|CAX24780.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
          Length = 874

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/385 (36%), Positives = 218/385 (56%), Gaps = 36/385 (9%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREK 252
           L YGV+ G  + +  +  +      +D    +  +    A+I  ++ ++     D   E 
Sbjct: 502 LAYGVIPGLEKQLSEIEAAAESAVARDG---MVEEAVTPAHIAGVVSRWTGVPVDKMLEG 558

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 ERE--KLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +      
Sbjct: 676 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNLGSEYL------ 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         +++  G + DV      +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 730 --------------VNQPAGQDTDV-----VRDEVMG-VVRGHF-RPEFLNRVDEIILFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L   A K L+   I +  D +  T LAD GYD  YGAR +K  +++
Sbjct: 769 RLARSEMGAIVDIQLGRLA-KLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQK 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
            V   LA A    VI  G  V + V
Sbjct: 828 NVQDPLAEAILSGVIHDGETVPVRV 852


>gi|418062922|ref|ZP_12700659.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens DSM
           13060]
 gi|373563519|gb|EHP89711.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens DSM
           13060]
          Length = 874

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 142/385 (36%), Positives = 218/385 (56%), Gaps = 36/385 (9%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREK 252
           L YGV+ G  + +  +  +      +D    +  +    A+I  ++ ++     D   E 
Sbjct: 502 LAYGVIPGLEKQLSEIEAAAESAVARDG---MVEEAVTPAHIAGVVSRWTGVPVDKMLEG 558

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 ERE--KLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +      
Sbjct: 676 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNLGSEYL------ 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         +++  G + DV      +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 730 --------------VNQPAGQDTDV-----VRDEVMG-VVRGHF-RPEFLNRVDEIILFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L   A K L+   I +  D +  T LAD GYD  YGAR +K  +++
Sbjct: 769 RLARSEMGAIVDIQLGRLA-KLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQK 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
            V   LA A    VI  G  V + V
Sbjct: 828 NVQDPLAEAILSGVIHDGETVPVRV 852


>gi|218530577|ref|YP_002421393.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens CM4]
 gi|218522880|gb|ACK83465.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens CM4]
          Length = 874

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 142/385 (36%), Positives = 218/385 (56%), Gaps = 36/385 (9%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREK 252
           L YGV+ G  + +  +  +      +D    +  +    A+I  ++ ++     D   E 
Sbjct: 502 LAYGVIPGLEKQLSEIEAAAESAVARDG---MVEEAVTPAHIAGVVSRWTGVPVDKMLEG 558

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 ERE--KLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +      
Sbjct: 676 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNLGSEYL------ 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         +++  G + DV      +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 730 --------------VNQPAGQDTDV-----VRDEVMG-VVRGHF-RPEFLNRVDEIILFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L   A K L+   I +  D +  T LAD GYD  YGAR +K  +++
Sbjct: 769 RLARSEMGAIVDIQLGRLA-KLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQK 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
            V   LA A    VI  G  V + V
Sbjct: 828 NVQDPLAEAILSGVIHDGETVPVRV 852


>gi|163851769|ref|YP_001639812.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens PA1]
 gi|240138934|ref|YP_002963409.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
 gi|163663374|gb|ABY30741.1| ATP-dependent chaperone ClpB [Methylobacterium extorquens PA1]
 gi|240008906|gb|ACS40132.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
          Length = 874

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 142/385 (36%), Positives = 218/385 (56%), Gaps = 36/385 (9%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREK 252
           L YGV+ G  + +  +  +      +D    +  +    A+I  ++ ++     D   E 
Sbjct: 502 LAYGVIPGLEKQLSEIEAAAESAVARDG---MVEEAVTPAHIAGVVSRWTGVPVDKMLEG 558

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 ERE--KLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +      
Sbjct: 676 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNLGSEYL------ 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         +++  G + DV      +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 730 --------------VNQPAGQDTDV-----VRDEVMG-VVRGHF-RPEFLNRVDEIILFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L   A K L+   I +  D +  T LAD GYD  YGAR +K  +++
Sbjct: 769 RLARSEMGAIVDIQLGRLA-KLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQK 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
            V   LA A    VI  G  V + V
Sbjct: 828 NVQDPLAEAILSGVIHDGETVPVRV 852


>gi|374309006|ref|YP_005055436.1| ATP-dependent chaperone ClpB [Granulicella mallensis MP5ACTX8]
 gi|358751016|gb|AEU34406.1| ATP-dependent chaperone ClpB [Granulicella mallensis MP5ACTX8]
          Length = 877

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/347 (38%), Positives = 209/347 (60%), Gaps = 31/347 (8%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD    D++  +  +  ++ +I +I+ K+      + +  E E ++   +EQRL++R+VG
Sbjct: 527 ADAKSGDSASRLLKEEVDEEDIAKIVSKWT--GIPIAKMLEGEVQKLTQMEQRLRERVVG 584

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q+ A+ +++ AI+R   G +D   P+  F+FLG +G+GKTE A+ LA ++  D ++A +R
Sbjct: 585 QDEALVVVANAIRRSRAGLSDPKRPIGSFIFLGPTGVGKTETARALAEFLF-DDEQAMVR 643

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           +DMSEY EKH VA+LIGAPPGY+G D+GGQLT+ +++ P AVVLFDE++KAHPDV  VLL
Sbjct: 644 IDMSEYMEKHAVARLIGAPPGYVGFDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVLL 703

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEE-FSKRTPSISKSQ 450
           Q+ D+GRLTD KG+T++ K+ + +MTSNL + +++        EGE+ F++         
Sbjct: 704 QVLDDGRLTDSKGRTVDFKNTVLIMTSNLGAGQLSTAW----AEGEDGFAE--------- 750

Query: 451 GSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA 510
                       K+ V++  L++HF R EFL R+++ V F P  +S+L  +V   L    
Sbjct: 751 -----------AKNRVMEE-LRKHF-RPEFLNRVDDTVVFHPLGESQLTHIVDLRLADLQ 797

Query: 511 KKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           K   D+     + D     I   GYD  YGAR +K  ++R V   LA
Sbjct: 798 KMLADRRITLTLTDAARTAIFKAGYDRAYGARPLKRAIQRLVQDPLA 844


>gi|288801140|ref|ZP_06406596.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332074|gb|EFC70556.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 864

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 180/291 (61%), Gaps = 24/291 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R++GQE AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA Y+  D+  
Sbjct: 567 RVIGQEEAITAVSDAVRRSRAGMQDPKRPIASFIFLGTTGVGKTELAKALAEYLFNDET- 625

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV 
Sbjct: 626 MLTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVF 685

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ SN I Q    +  E  E         
Sbjct: 686 NILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSNLIQQKMATINDENRE--------- 736

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  +V +   ++   V  +LK+   R EFL RI+E + FLP +K E+  +V  +LN
Sbjct: 737 -------EVIVDTKYE---VMEMLKKTI-RPEFLNRIDETIMFLPLNKEEIAQVVELQLN 785

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
              KK L     ++ W       L + GYD  +GAR +K  ++R V++ L+
Sbjct: 786 -SVKKMLTAQGFDLQWTSKAVDFLTEVGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|282860238|ref|ZP_06269309.1| ATP-dependent chaperone protein ClpB [Prevotella bivia JCVIHMP010]
 gi|424899253|ref|ZP_18322799.1| ATP-dependent chaperone ClpB [Prevotella bivia DSM 20514]
 gi|282586971|gb|EFB92205.1| ATP-dependent chaperone protein ClpB [Prevotella bivia JCVIHMP010]
 gi|388593467|gb|EIM33705.1| ATP-dependent chaperone ClpB [Prevotella bivia DSM 20514]
          Length = 863

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 189/312 (60%), Gaps = 24/312 (7%)

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGI 308
           R  ++E  +   LE  L  R++GQE AI  ++ A++R   G  D   P+  F+FLG++G 
Sbjct: 549 RMMQSEREKLLHLEDELHQRVIGQEEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGT 608

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAK LA Y+  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++
Sbjct: 609 GKTELAKALADYLFNDET-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRR 667

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q 
Sbjct: 668 KPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQ 727

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
             +LR++      R   I+K++     VT+    K  +          R EFL RI+E +
Sbjct: 728 FQELREDN-----REEVINKTK-----VTVMDMLKQTI----------RPEFLNRIDETI 767

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHE 547
            FLP ++ E+  +V  +L    K  L    + + W       LA+ GYD  +GAR +K  
Sbjct: 768 MFLPLTQKEIAGVVKLQLE-RVKAMLQPQGLTLEWTDPAVNYLAEMGYDPEFGARPVKRA 826

Query: 548 VERQVVSQLAAA 559
           ++R V++ L+ +
Sbjct: 827 IQRYVLNNLSKS 838


>gi|359462099|ref|ZP_09250662.1| chaperone ClpB [Acaryochloris sp. CCMEE 5410]
          Length = 874

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/353 (35%), Positives = 208/353 (58%), Gaps = 30/353 (8%)

Query: 220 NSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINI 279
           N+  +  +   DA+I +I+ K+      + +   +E  +   LE  L  R++GQE A+  
Sbjct: 528 NTNSLLREEVTDADIAEIISKWT--GIPVSKLVASEMEKLLHLEDELHQRVIGQEEAVTA 585

Query: 280 ISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQ 338
           +S AI+R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D ++A +R+DMSEY 
Sbjct: 586 VSDAIQRSRAGLADPNRPIASFIFLGPTGVGKTELGKALAAYLF-DTEDAMVRIDMSEYM 644

Query: 339 EKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGR 398
           EKH VA++IGAPPGY+G+D+GGQLT+ +++ P AV+LFDE++KAHPDV  ++LQ+ D+GR
Sbjct: 645 EKHTVARMIGAPPGYVGYDEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGR 704

Query: 399 LTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTI 458
           +TD +G+T++ K+A+ +MTSN+ S    QH L L  +   +S+                 
Sbjct: 705 VTDSQGRTVDFKNAVIIMTSNIGS----QHILDLAGDDSRYSE----------------- 743

Query: 459 SRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHN 518
                 + V   ++ HF R EFL RI+E++ F    K +L  +   ++   AK+  D+  
Sbjct: 744 ----MQNRVMDAMRSHF-RPEFLNRIDELIIFRSLRKDQLRRITQLQVQRLAKRLSDRKM 798

Query: 519 INIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
              + +  ++ +   GYD  YGAR +K  ++R++ +Q+A A  +   G+G  +
Sbjct: 799 SLKLSESALDFLAEVGYDPVYGARPLKRAIQRELETQIAKAILRGDFGEGDTI 851


>gi|254255396|ref|ZP_04948712.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
            dolosa AUO158]
 gi|124901133|gb|EAY71883.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
            dolosa AUO158]
          Length = 1065

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/321 (39%), Positives = 203/321 (63%), Gaps = 25/321 (7%)

Query: 254  AEER-RKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
            AEE+ R   +E RL++R++GQ+ A+  +S A++R   G      P  VFLFLG +G+GKT
Sbjct: 723  AEEKARLLNMESRLRERVIGQDEAVTAVSDAVRRARAGLQARRRPTAVFLFLGPTGVGKT 782

Query: 312  ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
            ELAK LA  +  D+ +A +R+DMSEY E+H VA+LIG+PPGY+G+D+GGQLT+R+++ P 
Sbjct: 783  ELAKALAEVVFGDE-DAIVRVDMSEYMERHAVARLIGSPPGYVGYDEGGQLTERVRRRPY 841

Query: 372  AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            +VVLFDE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + + + TSNLAS+ IA     
Sbjct: 842  SVVLFDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLLIATSNLASDVIAGP--- 898

Query: 432  LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                    ++  P  + S G   D ++     +  V  +L++HF R EFL RI++++ F 
Sbjct: 899  --------TRPAPGFTSSDG---DASV-----EAAVMNVLRQHF-RPEFLNRIDDVILFK 941

Query: 492  PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
               + E   +V  +L+   ++     ++++V+D  V   LA +GY   +GAR ++ ++ +
Sbjct: 942  ALGRDETARIVRLQLD-AVRRLAGSQDVDLVFDDSVVDHLAREGYRPEFGARELRRQIRQ 1000

Query: 551  QVVSQLAAAHEKSVIGKGSFV 571
             + ++LA A     + +G  V
Sbjct: 1001 SIENELAKAMLDGKVAEGMRV 1021


>gi|158335282|ref|YP_001516454.1| chaperone ClpB [Acaryochloris marina MBIC11017]
 gi|158305523|gb|ABW27140.1| chaperone ClpB [Acaryochloris marina MBIC11017]
          Length = 875

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/353 (35%), Positives = 208/353 (58%), Gaps = 30/353 (8%)

Query: 220 NSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINI 279
           N+  +  +   DA+I +I+ K+      + +   +E  +   LE  L  R++GQE A+  
Sbjct: 528 NTNSLLREEVTDADIAEIISKWT--GIPVSKLVASEMEKLLHLEDELHQRVIGQEEAVTA 585

Query: 280 ISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQ 338
           +S AI+R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D ++A +R+DMSEY 
Sbjct: 586 VSDAIQRSRAGLADPNRPIASFIFLGPTGVGKTELGKALAAYLF-DTEDAMVRIDMSEYM 644

Query: 339 EKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGR 398
           EKH VA++IGAPPGY+G+D+GGQLT+ +++ P AV+LFDE++KAHPDV  ++LQ+ D+GR
Sbjct: 645 EKHTVARMIGAPPGYVGYDEGGQLTEAVRRRPYAVILFDEIEKAHPDVFNIMLQILDDGR 704

Query: 399 LTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTI 458
           +TD +G+T++ K+A+ +MTSN+ S    QH L L  +   +S+                 
Sbjct: 705 VTDSQGRTVDFKNAVIIMTSNIGS----QHILDLAGDDSRYSE----------------- 743

Query: 459 SRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHN 518
                 + V   ++ HF R EFL RI+E++ F    K +L  +   ++   AK+  D+  
Sbjct: 744 ----MQNRVMDAMRSHF-RPEFLNRIDELIIFRSLRKDQLRRITQLQVQRLAKRLSDRKM 798

Query: 519 INIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
              + +  ++ +   GYD  YGAR +K  ++R++ +Q+A A  +   G+G  +
Sbjct: 799 SLKLSESALDFLAEVGYDPVYGARPLKRAIQRELETQIAKAILRGDFGEGDTI 851


>gi|254558918|ref|YP_003066013.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
 gi|254266196|emb|CAX21953.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
          Length = 874

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/381 (37%), Positives = 216/381 (56%), Gaps = 36/381 (9%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREK 252
           L YGV+ G  + +  +  +      +D    +  +    A+I  ++ ++     D   E 
Sbjct: 502 LAYGVIPGLEKQLSEIEAAAESAVARDG---MVEEAVTPAHIAGVVSRWTGVPVDKMLEG 558

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 ERE--KLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +      
Sbjct: 676 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNLGSEYL------ 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         +++  G + DV      +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 730 --------------VNQPAGQDTDV-----VRDEVMG-VVRGHF-RPEFLNRVDEIILFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L   A K L+   I +  D +  T LAD GYD  YGAR +K  +++
Sbjct: 769 RLARSEMGAIVDIQLGRLA-KLLEDRKITLDVDGEARTWLADKGYDPAYGARPLKRVIQK 827

Query: 551 QVVSQLAAAHEKSVIGKGSFV 571
            V   LA A    VI  G  V
Sbjct: 828 NVQDPLAEAILSGVIHDGETV 848


>gi|374856627|dbj|BAL59480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [uncultured
           candidate division OP1 bacterium]
          Length = 889

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/320 (42%), Positives = 202/320 (63%), Gaps = 27/320 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LE+RL +R+VGQ+ AI  +S AI+    G  + + P+  FLFLG +G+GKTE
Sbjct: 572 EERDKLLHLEERLHERVVGQDEAIRAVSNAIRLARAGLKEKNRPIATFLFLGPTGVGKTE 631

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA+ +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+++GGQLT+R+++ P +
Sbjct: 632 LAKALAWAVFGDE-DAIIRIDMSEYMERHSVARLIGAPPGYVGYEEGGQLTERVRRRPYS 690

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           VVL DE++KAHPDV  +LLQ+FDEGRLTDGKG+T++  + I + TSNL S EI Q  L L
Sbjct: 691 VVLLDEIEKAHPDVHNILLQVFDEGRLTDGKGRTVDFTNTIIIATSNLGS-EIIQRNLTL 749

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
               EE+ +   ++ +                  +  IL+R+F R EFL RI+EI+ F  
Sbjct: 750 ---PEEYKRSYEALKEE-----------------LMTILRRNF-RPEFLNRIDEIIIFHA 788

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQ 551
            +  ++  +V  +L   A + + +  I + WD  +   LA+ GY   +GAR +K ++  +
Sbjct: 789 LTPEQIKEIVKLQLKKVA-EMVQEQEITVQWDDSLIEHLAEVGYQPEFGARELKRKIRSE 847

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           V ++L++A  +  I  G  V
Sbjct: 848 VETELSSAILQGTIRAGDTV 867


>gi|296535581|ref|ZP_06897762.1| ATPase with chaperone activity, ATP-binding subunit [Roseomonas
           cervicalis ATCC 49957]
 gi|296264097|gb|EFH10541.1| ATPase with chaperone activity, ATP-binding subunit [Roseomonas
           cervicalis ATCC 49957]
          Length = 938

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 200/327 (61%), Gaps = 28/327 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE  +   +E+RL  R++GQE AI+ +S A++    G  +   P+  FLFLG +G+GKT
Sbjct: 609 EAEREKLLKMEERLHQRVIGQEEAISAVSDAVRLARAGLREGSKPVATFLFLGPTGVGKT 668

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  ++ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P 
Sbjct: 669 ELAKALAEVVYGDEN-ALLRIDMSEYMERHAVARLVGAPPGYVGYDEGGQLTEKVRRKPY 727

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL ++ I Q  L 
Sbjct: 728 SVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGADRI-QKRLH 786

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           LR    E     P   K++                +  +L+ HF R EFL RI+EI+ F 
Sbjct: 787 LRGTMAE----QPDKLKAE----------------LMEVLRGHF-RPEFLNRIDEIIVFH 825

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVER 550
             SK+E+  +V  +L    K+      +++ +D  +  +L A+GY   YGAR +K ++  
Sbjct: 826 ALSKAEIRQIVLLQLE-RVKRTAASQGVSLEFDESLIAMLAAEGYRPEYGARELKRQIRS 884

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQW 577
            V ++LA A     + KG  V L  +W
Sbjct: 885 LVETRLARAMLGGEVAKGDAVTL--RW 909


>gi|340621095|ref|YP_004739546.1| chaperone protein clpB [Capnocytophaga canimorsus Cc5]
 gi|339901360|gb|AEK22439.1| Chaperone protein clpB [Capnocytophaga canimorsus Cc5]
          Length = 860

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/306 (40%), Positives = 190/306 (62%), Gaps = 23/306 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE  L  R+VGQE AI  IS AI+R + G  D   P+  FLFLG++G+GKT
Sbjct: 550 QGEREKLLKLESELHKRVVGQEEAIEAISDAIRRSKAGLQDPKKPIGSFLFLGTTGVGKT 609

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 610 ELAKALAEYLF-DDENAMTRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 668

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S     H +Q
Sbjct: 669 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNIGS-----HLIQ 723

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K T  + K+         +   KD V+Q  L +   R EF+ RI++IV F 
Sbjct: 724 -----ESFEKYTNDLEKA---------TEVAKDDVLQ--LLKQTVRPEFINRIDDIVMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P S+  + ++V  +L    K    ++ +    D  ++ +   G+D  +GAR +K  ++++
Sbjct: 768 PLSRENIRSIVRLQLRSIIKMVARENILLDATDQAIDYLAEKGFDPQFGARPVKRTLQKE 827

Query: 552 VVSQLA 557
           V+++L+
Sbjct: 828 VLNRLS 833


>gi|282876956|ref|ZP_06285805.1| ATP-dependent chaperone protein ClpB [Prevotella buccalis ATCC
           35310]
 gi|281300910|gb|EFA93230.1| ATP-dependent chaperone protein ClpB [Prevotella buccalis ATCC
           35310]
          Length = 863

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 190/307 (61%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 552 QSEKDKLLHLESELHKRVIGQDEAITAVSDAVRRSRAGLHDPKRPIASFIFLGTTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 612 ELAKALAEYLFNDES-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I     Q
Sbjct: 671 SVILFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYI-----Q 725

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            +  G +   R   + +++              H V  +LK+   R EFL RI+E + FL
Sbjct: 726 EQMAGIDAHNREDKLRETK--------------HTVMEMLKKTI-RPEFLNRIDETIMFL 770

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +++E+ ++V  ++N   KK L +    + W  +    L   GYD  +GAR +K  ++R
Sbjct: 771 PLTRTEIDSVVKLQMN-AVKKMLSEQGFTLEWTPNAIDFLGKVGYDPEFGARPVKRAIQR 829

Query: 551 QVVSQLA 557
            V++ L+
Sbjct: 830 YVLNDLS 836


>gi|319955158|ref|YP_004166425.1| ATP-dependent chaperone clpb [Cellulophaga algicola DSM 14237]
 gi|319423818|gb|ADV50927.1| ATP-dependent chaperone ClpB [Cellulophaga algicola DSM 14237]
          Length = 865

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/307 (41%), Positives = 192/307 (62%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLQLEAVLHKRVVGQEEAIEAVSDAIRRSRAGLQDTKRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKTLASYLF-DDESAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   VLLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDTFNVLLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                ++F     + S ++ + ++V             +LK+   R EFL RI++I+ F 
Sbjct: 725 -----DKFETNPDAYSATEAARVEVL-----------GLLKKTI-RPEFLNRIDDIIMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P SK ++  +V  +L+   KK L K +I +   D  ++ +   GYD  YGAR IK  +++
Sbjct: 768 PLSKKDIVKIVRLQLD-GLKKMLAKQHITVDATDETIKYLAEKGYDPQYGARPIKRVIQK 826

Query: 551 QVVSQLA 557
           +V++ L+
Sbjct: 827 EVLNTLS 833


>gi|325287550|ref|YP_004263340.1| ATP-dependent chaperone ClpB [Cellulophaga lytica DSM 7489]
 gi|324323004|gb|ADY30469.1| ATP-dependent chaperone ClpB [Cellulophaga lytica DSM 7489]
          Length = 862

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/307 (42%), Positives = 186/307 (60%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  ++ AI+R  +G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLDLESVLHKRVVGQEEAIEAVANAIRRSRSGLQDAKRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKTLASYLF-DDENALTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S+ I Q +  
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGSS-IIQESFN 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             K                    D TI+       V  +LK    R EFL RI++IV F 
Sbjct: 729 THK--------------------DATIATEAAKTDVLGLLKASI-RPEFLNRIDDIVMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P SK  +  +V  +LN   KK + + NI I   D  V  +   GYD  YGAR +K  +++
Sbjct: 768 PLSKDNIKKIVRLQLNAL-KKLVAEQNITIDATDEAVGFLALKGYDPQYGARPVKRIIQK 826

Query: 551 QVVSQLA 557
           +V++ L+
Sbjct: 827 EVLNNLS 833


>gi|188582962|ref|YP_001926407.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
 gi|179346460|gb|ACB81872.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
          Length = 874

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 134/325 (41%), Positives = 194/325 (59%), Gaps = 31/325 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 557 EGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL           
Sbjct: 676 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNL----------- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G E+    P+    Q +N         +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 725 ----GAEYLVNQPA---GQDTN-------AVRDEVMG-VVRGHF-RPEFLNRVDEIILFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L   A K L+   I I  D +  T LAD GYD  YGAR +K  +++
Sbjct: 769 RLARSEMGAIVDIQLGRLA-KLLEDRKITIDVDDEARTWLADKGYDPAYGARPLKRVIQK 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
            V   LA A    VI  G  V + V
Sbjct: 828 NVQDPLAEAILSGVIHDGETVPIRV 852


>gi|186474276|ref|YP_001861618.1| ATPase [Burkholderia phymatum STM815]
 gi|184196608|gb|ACC74572.1| ATPase AAA-2 domain protein [Burkholderia phymatum STM815]
          Length = 902

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/338 (39%), Positives = 207/338 (61%), Gaps = 25/338 (7%)

Query: 255 EERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           E++R   +E+RL  R++GQ+ A+  +S A++R   G      P  VFLFLG +G+GKTEL
Sbjct: 574 EKQRLLNMEERLHQRVIGQDEAVVAVSDAVRRSRAGLQARHRPTAVFLFLGPTGVGKTEL 633

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           AK LA  +  D+ +A +R DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +V
Sbjct: 634 AKALAEVVFGDE-DAMLRFDMSEYMERHTVARLIGAPPGYVGYDEGGQLTERVRRKPYSV 692

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           +L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + + + TSNL ++ IA  +    
Sbjct: 693 ILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNLGADVIAGQS---- 748

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
           + G  F     S S  QGS ++V              L++HF R EFL RI++I+ F   
Sbjct: 749 RTGPGFLSEAGSASL-QGSVMNV--------------LRQHF-RPEFLNRIDDIILFKSL 792

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQV 552
            + E   +V  +L   ++ A    +I + +D   V+ +  +GY   +GAR ++ ++++Q+
Sbjct: 793 GREETRHIVSLQLEHVSRLA-SSQDITLAFDDSIVDHLATEGYRPEFGARELRRQIQQQI 851

Query: 553 VSQLAAAHEKSVIGKGSFVRL-YVQWSKEVSEDSAKGG 589
            +QLA A     + +G  V   Y    ++V+ + A GG
Sbjct: 852 ENQLAKAMLNGDVQEGMHVICRYDAERRQVTFEPAAGG 889


>gi|163848669|ref|YP_001636713.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl]
 gi|222526605|ref|YP_002571076.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl]
 gi|163669958|gb|ABY36324.1| ATP-dependent chaperone ClpB [Chloroflexus aurantiacus J-10-fl]
 gi|222450484|gb|ACM54750.1| ATP-dependent chaperone ClpB [Chloroflexus sp. Y-400-fl]
          Length = 861

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/316 (39%), Positives = 193/316 (61%), Gaps = 28/316 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +E+RL  R+VGQ+ A+  +S A++R   G  D + PL  FLFLG +G+GKTELA+ LA +
Sbjct: 564 MEERLHQRVVGQDEAVIAVSNAVRRARAGLQDPNRPLGSFLFLGPTGVGKTELARALAEF 623

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D ++A IR+DMSEY EKH VA+LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 624 LF-DDEQAMIRIDMSEYMEKHSVARLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 682

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  VLLQ+ D+GRLTDG+G+ +  K+ + +MTSN+AS  I           +E +
Sbjct: 683 KAHPDVFNVLLQVLDDGRLTDGQGRIVNFKNTVIIMTSNIASTTI-----------QELT 731

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
           +     S+ + + ++                 R   R EFL RI+E++ F P S+  +  
Sbjct: 732 RAGAGQSEIRAAVMEEL---------------RGVLRPEFLNRIDEVIVFSPLSREHIDR 776

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAH 560
           +V  +LN   K   D+    ++ D     + A+GYD  YGAR +K  +++++ + LA   
Sbjct: 777 IVEIQLNRLRKLLADRKLNLVLTDAARAQLAAEGYDPVYGARPLKRVIQQRIQNPLALQL 836

Query: 561 EKSVIGKGSFVRLYVQ 576
            +    +GS + + V+
Sbjct: 837 LQGAFPEGSTIVVDVE 852


>gi|188581554|ref|YP_001924999.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
 gi|179345052|gb|ACB80464.1| ATP-dependent chaperone ClpB [Methylobacterium populi BJ001]
          Length = 874

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/325 (40%), Positives = 195/325 (60%), Gaps = 31/325 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 557 EGEREKLLAMEEALGKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL           
Sbjct: 676 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNL----------- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G E+    P+     G + D       +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 725 ----GAEYLVNQPA-----GQDTDA-----VRDEVMG-VVRSHF-RPEFLNRVDEIILFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L   A K L+   I++  D +  T LAD GYD  YGAR +K  +++
Sbjct: 769 RLARSEMGAIVDIQLGRLA-KLLEDRKISLDVDDEARTWLADKGYDPAYGARPLKRVIQK 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
            V   LA A    VI  G  V + V
Sbjct: 828 NVQDPLAEAILSGVIHDGETVPVRV 852


>gi|395212959|ref|ZP_10400037.1| ATP-dependent chaperone clpb [Pontibacter sp. BAB1700]
 gi|394456926|gb|EJF11144.1| ATP-dependent chaperone clpb [Pontibacter sp. BAB1700]
          Length = 871

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 198/320 (61%), Gaps = 24/320 (7%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R+ GQE AI  IS A++R   G  D   P+  F+FLG++G+GKTELAK LA Y
Sbjct: 561 LERELGRRVAGQEEAIEAISDAVRRSRAGMQDPKRPIGSFIFLGTTGVGKTELAKALADY 620

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+  A +R+DMSEYQE+H V+++IGAPPGY+G+D+GGQLT+ +++ P +VVL DE++
Sbjct: 621 LFNDEN-AMVRIDMSEYQERHAVSRMIGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIE 679

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I  +  Q+    +EF 
Sbjct: 680 KAHPDVFNILLQVLDDGRLTDSKGRVVNFKNTIIIMTSNIGSHIIQSNFEQM----DEF- 734

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                       N D  I R  KD V + +LK+   R EFL RI+E+V F P S+ ++  
Sbjct: 735 ------------NHDEVIERT-KDEVFE-LLKKSV-RPEFLNRIDELVMFRPLSREDIRK 779

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  +      + L++  I ++   +V   L + GYD  +GAR +K  ++RQV+++L+  
Sbjct: 780 IVSIQFGHIQDR-LEEAGIKLIATDEVLDYLGEQGYDPQFGARPLKRVLQRQVLNELSKE 838

Query: 560 HEKSVIGKGSFVRLYVQWSK 579
                I K S V   ++  +
Sbjct: 839 ILAGTINKDSVVEAVLEGGQ 858


>gi|325856627|ref|ZP_08172265.1| ATP-dependent chaperone protein ClpB [Prevotella denticola CRIS
           18C-A]
 gi|325483341|gb|EGC86316.1| ATP-dependent chaperone protein ClpB [Prevotella denticola CRIS
           18C-A]
          Length = 862

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 126/298 (42%), Positives = 181/298 (60%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V +LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDES-MMTRIDMSEYQEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q    L       S
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFENLTD-----S 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I K++ +              V  +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 734 NREEVIEKARAA--------------VMEMLKKTI-RPEFLNRIDETIMFLPLTKEQIGG 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K  L+   IN+ W D  +  +   GYD  +GAR +K  ++R V++ L+
Sbjct: 779 VVRLQLE-RVKAMLEPQGINLQWTDPAISYLAGVGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|303236051|ref|ZP_07322654.1| ATP-dependent chaperone protein ClpB [Prevotella disiens
           FB035-09AN]
 gi|302483924|gb|EFL46916.1| ATP-dependent chaperone protein ClpB [Prevotella disiens
           FB035-09AN]
          Length = 863

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 191/309 (61%), Gaps = 24/309 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           ++E  +   LE  L  R++GQE AI  ++ A++R   G  D   P+  F+FLG++G GKT
Sbjct: 551 QSEREKLLNLEHELHKRVIGQEEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLFNDET-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+G LTD KG+ +  K+ I +MTSNL S  I Q    
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGHLTDNKGRVVNFKNTIIIMTSNLGSQYIQQ---- 725

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                 EF+K T     ++ + +D T +       V  +LK+   R EFL RI+E + FL
Sbjct: 726 ------EFAKLT---EDNRQNIIDSTRT------TVMDMLKKTI-RPEFLNRIDETIMFL 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVER 550
           P +++E+  +V  +L   AK+ L+     + W D  V+ +   GYD  +GAR +K  ++R
Sbjct: 770 PLTQTEISKVVSLQLE-RAKQMLEPQGFTLQWTDSAVDYLAQVGYDPEFGARPVKRAIQR 828

Query: 551 QVVSQLAAA 559
            V++ L+ A
Sbjct: 829 YVLNDLSKA 837


>gi|390955167|ref|YP_006418925.1| ATP-dependent chaperone ClpB [Aequorivita sublithincola DSM 14238]
 gi|390421153|gb|AFL81910.1| ATP-dependent chaperone ClpB [Aequorivita sublithincola DSM 14238]
          Length = 866

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 127/300 (42%), Positives = 190/300 (63%), Gaps = 30/300 (10%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE +L  R+VGQE AI  +S AI+R   G  D+  P+  FLFLG++G+GKTELAK LA Y
Sbjct: 560 LEDQLHKRVVGQEEAIIAVSDAIRRSRAGLQDEKKPIGSFLFLGTTGVGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D + A  R+DMSEYQE+H V++L+GAPPGY+G+++GGQLT+ +++ P +VVL DE++
Sbjct: 620 LF-DDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVVLLDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S+ I Q   +  K+ E   
Sbjct: 679 KAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGSD-IIQQRFEAVKDPE--- 734

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                 +  +G+ ++V             +LK+   R EFL RI++I+ F P SK ++H 
Sbjct: 735 ------TAMEGAKVEVL-----------ALLKQTV-RPEFLNRIDDIIMFTPLSKKDIHK 776

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETIL---ADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L   ++  L +   NIV D   E I      GYD  +GAR +K  ++R+V+++L+
Sbjct: 777 IVELQLKGVSRMLLKQ---NIVLDATPEAITYLSEKGYDPQFGARPVKRVIQREVLNELS 833


>gi|337287439|ref|YP_004626912.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
 gi|335360267|gb|AEH45948.1| ATP-dependent chaperone ClpB [Thermodesulfatator indicus DSM 15286]
          Length = 872

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 198/339 (58%), Gaps = 40/339 (11%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E  +   +E+RL  R+VGQ+ AI  I+ A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 557 ESEREKLLKMEERLAQRVVGQDHAIKAIANAVRRARAGLKDPNRPIGSFMFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D +EA IR DMSEY EKH V+KLIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 617 ELAKALAEFMF-DTEEALIRFDMSEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  ++ I +MTSN+ S+ + +  L+
Sbjct: 676 SVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFQNTIIIMTSNIGSHYVME--LE 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            RK+ E                            +V   ++ HF R EFL RI+EI+ F 
Sbjct: 734 DRKDAE---------------------------RLVMDAVRSHF-RPEFLNRIDEIIIFN 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             +K +L  +V  ++ +  ++  DKH    + D   E +   GYD  YGAR +K  ++R 
Sbjct: 766 KLTKEQLKKIVDIQIRYLQQRLEDKHITIELTDRAKEWLAEVGYDPVYGARPLKRAIQRY 825

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGI 590
           +   LA    +    +G  +         V  D  KGG+
Sbjct: 826 IEDPLAVKILEGTFQEGDHIL--------VDYDETKGGL 856


>gi|383774614|ref|YP_005453683.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium sp.
           S23321]
 gi|381362741|dbj|BAL79571.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium sp.
           S23321]
          Length = 879

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 139/353 (39%), Positives = 205/353 (58%), Gaps = 35/353 (9%)

Query: 208 LLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLK 267
           L K  AD   K+NSG +  +     +I Q++ ++     D   E E E+  K  +E +L 
Sbjct: 511 LEKQLADIEAKENSGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLK--MEGQLG 568

Query: 268 DRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKK 326
            R+VGQ  A+  ++ A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+ 
Sbjct: 569 QRVVGQAEAVRAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDET 628

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
            A +RLDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV
Sbjct: 629 -AMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDV 687

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
             VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S      
Sbjct: 688 FNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSA----- 737

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
                           ++HV+  + + HF R EFL R++EI+ F    KSE+  +V  E+
Sbjct: 738 ---------------VREHVMATV-RTHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EI 778

Query: 507 NFWA-KKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
            F   ++ L    I +  D      LA+ G+D  YGAR +K  V+R V   LA
Sbjct: 779 QFSRLERLLTDRKIVLTLDGKARDWLAEKGWDPAYGARPLKRVVQRYVQDPLA 831


>gi|15894191|ref|NP_347540.1| ABC transporter ATPase [Clostridium acetobutylicum ATCC 824]
 gi|337736121|ref|YP_004635568.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
 gi|384457630|ref|YP_005670050.1| ATPase with chaperon activity, two ATP-binding domains [Clostridium
           acetobutylicum EA 2018]
 gi|15023802|gb|AAK78880.1|AE007605_13 ATPase with chaperon activity, two ATP-binding domains, ClpC
           orthologs [Clostridium acetobutylicum ATCC 824]
 gi|325508319|gb|ADZ19955.1| ATPase with chaperon activity, two ATP-binding domains [Clostridium
           acetobutylicum EA 2018]
 gi|336290362|gb|AEI31496.1| ABC transporter ATPase [Clostridium acetobutylicum DSM 1731]
          Length = 752

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 203/333 (60%), Gaps = 28/333 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
           +Q+  E E  +   LE+RL  R++GQ  A++ ++  I+R  +G+     P  F+F+G +G
Sbjct: 443 VQKITEIEAEKLLNLEERLHKRVIGQNEAVSSVARTIRRNRSGFKKLKKPSSFIFVGPTG 502

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           +GKTEL K LA  + +++K A IR+DMSEY EKH V+KLIGAPPGY+G+D+GGQLT++++
Sbjct: 503 VGKTELVKTLASELFQNEK-ALIRVDMSEYMEKHTVSKLIGAPPGYVGYDNGGQLTEKVR 561

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           + P +V+L DE++KAHPDV  +LLQ+ ++GRLTD +G+T+  ++ I +MTSN  +N    
Sbjct: 562 RNPYSVILLDEIEKAHPDVFNILLQILEDGRLTDSQGRTVNFENTIIIMTSNAGTN---- 617

Query: 428 HALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEI 487
               L+  G  FS+   S           ++S   KD     +L+  F R EFL RI+E 
Sbjct: 618 ----LKSSGIGFSRDDYS-----------SLSGKIKD-----VLRETF-RPEFLNRIDET 656

Query: 488 VYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET-ILADGYDVHYGARSIKH 546
           + F   +K EL  ++   L     +  DK +I I    DV+  I ++GYD  YGAR ++ 
Sbjct: 657 IIFTELNKDELMKIIDLMLKEIINEGKDK-DIAIEISEDVKDFIFSNGYDKKYGARPLRR 715

Query: 547 EVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSK 579
            +++ +  +LA  + K +  +GS VR+Y+Q  K
Sbjct: 716 TIQKYIEDELAEFYIKGIYKEGSKVRIYIQDEK 748


>gi|323344493|ref|ZP_08084718.1| chaperone protein ClpB [Prevotella oralis ATCC 33269]
 gi|323094620|gb|EFZ37196.1| chaperone protein ClpB [Prevotella oralis ATCC 33269]
          Length = 863

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 190/312 (60%), Gaps = 24/312 (7%)

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGI 308
           R  ++E  +   LE+ L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+
Sbjct: 549 RMMQSERDKLLHLEEELHKRVIGQDEAITAVADAVRRSRAGLQDPKRPIASFIFLGTTGV 608

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAK LA Y+  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++
Sbjct: 609 GKTELAKALAEYLFNDET-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRR 667

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+LFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q 
Sbjct: 668 KPYSVLLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQ 727

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
             Q+       + R   I++++                V  +LKR   R EFL RI+E +
Sbjct: 728 FEQMND-----TNREEKIAETK--------------REVMEMLKRTI-RPEFLNRIDETI 767

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHE 547
            F+P +K E+  +V  ++    +K L      + W  D    LAD G+D  +GAR +K  
Sbjct: 768 MFMPLTKDEIAKVVILQMK-NVQKMLLAQGFTLNWTPDAIDYLADVGFDPEFGARPVKRA 826

Query: 548 VERQVVSQLAAA 559
           ++R V++ L+ +
Sbjct: 827 IQRYVLNDLSKS 838


>gi|340620706|ref|YP_004739159.1| chaperone ClpB [Zobellia galactanivorans]
 gi|339735503|emb|CAZ98880.1| Chaperone ClpB [Zobellia galactanivorans]
          Length = 866

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 128/307 (41%), Positives = 189/307 (61%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  +S AI+R   G  D + P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLKLEDVLHKRVVGQEEAIVAVSDAIRRSRAGLQDANKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKTLASYLF-DDESAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S+ I      
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGSSIIQ----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E++       S ++ + ++V              L R   R EFL RI++I+ F 
Sbjct: 725 -----EKYENNKDPFSAAEAARVEVL------------GLLRKTIRPEFLNRIDDIIMFS 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P S+ ++  +V  +LN   KK + K +I I    +    LA+ GYD  YGAR IK  ++R
Sbjct: 768 PLSREDISKIVRLQLNSL-KKTIAKQHITIDATEEAINYLANKGYDPQYGARPIKRVIQR 826

Query: 551 QVVSQLA 557
           +V++ L+
Sbjct: 827 EVLNNLS 833


>gi|443474687|ref|ZP_21064658.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
 gi|443020577|gb|ELS34522.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
          Length = 872

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 190/306 (62%), Gaps = 28/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   LE  L DR+VGQE A+  I+ AI+R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 ESEKEKLLQLENVLHDRVVGQEEAVTAIADAIQRSRAGLADPNRPIASFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +E+ +R+DMSEY EKH V++L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKALAAYLF-DTEESMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  ++LQ+ D+GR+TD +G+T++ K+AI +MTSN+ S    Q+ L 
Sbjct: 678 AVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKNAIIIMTSNVGS----QYILD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  +   + +    + +S  ++                       R EFL RI+EIV F 
Sbjct: 734 IAGDDSRYEEMRERVMESMRASF----------------------RPEFLNRIDEIVIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              + EL  +V  ++    K+  D+     + D+ ++ +   GYD  YGAR +K  ++RQ
Sbjct: 772 ALRRDELRRIVKLQVQRLEKRLSDRRMTLKIADVALDFLAEVGYDPVYGARPLKRIIQRQ 831

Query: 552 VVSQLA 557
           + +++A
Sbjct: 832 LETKIA 837


>gi|383812607|ref|ZP_09968042.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 306
           str. F0472]
 gi|383354808|gb|EID32357.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 306
           str. F0472]
          Length = 862

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/298 (42%), Positives = 183/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V +LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDES-MMTRIDMSEYQEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q    L       +
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFEHLND-----T 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I K++ + +D              +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 734 NREEVIDKAKVAVMD--------------MLKKTI-RPEFLNRIDETIMFLPLTKDQIGG 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K+ L+   IN+ W       L+D GYD  +GAR +K  ++R V++ L+
Sbjct: 779 VVRLQLE-RVKEMLEPQGINLEWTDPAINYLSDVGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|325269262|ref|ZP_08135880.1| chaperone protein ClpB [Prevotella multiformis DSM 16608]
 gi|324988389|gb|EGC20354.1| chaperone protein ClpB [Prevotella multiformis DSM 16608]
          Length = 862

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/298 (42%), Positives = 181/298 (60%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V +LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDES-MMTRIDMSEYQEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q    L       S
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFENLTD-----S 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I K++ +              V  +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 734 NREEVIEKARTA--------------VMEMLKKTI-RPEFLNRIDETIMFLPLTKEQIGG 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K  L+   IN+ W D  +  +   GYD  +GAR +K  ++R V++ L+
Sbjct: 779 VVRLQLE-RVKAMLEPQGINLQWTDPAISYLAGVGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|327313393|ref|YP_004328830.1| ATP-dependent chaperone protein ClpB [Prevotella denticola F0289]
 gi|326945354|gb|AEA21239.1| ATP-dependent chaperone protein ClpB [Prevotella denticola F0289]
          Length = 862

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 126/298 (42%), Positives = 181/298 (60%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V +LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDES-MMTRIDMSEYQEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q    L       S
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFENLTD-----S 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I K++ +              V  +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 734 NREEVIEKARTA--------------VMEMLKKTI-RPEFLNRIDETIMFLPLTKEQIGG 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K  L+   IN+ W D  +  +   GYD  +GAR +K  ++R V++ L+
Sbjct: 779 VVRLQLE-RVKAMLEPQGINLQWTDPAISYLAGVGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|225873988|ref|YP_002755447.1| ATP-dependent chaperone protein ClpB [Acidobacterium capsulatum
           ATCC 51196]
 gi|225792293|gb|ACO32383.1| ATP-dependent chaperone protein ClpB [Acidobacterium capsulatum
           ATCC 51196]
          Length = 874

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E ++   +E+RL+DR+VGQ+ A++ ++ AI+R   G +D   P+  F+FLG +G+GKT
Sbjct: 559 EGEVQKLVQMEERLRDRVVGQDEALSTVANAIRRSRAGLSDPKRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E A+ LA ++  D ++A IR+DMSEY EKH VA+LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ETARALAEFLF-DDEQAMIRIDMSEYMEKHAVARLIGAPPGYVGYDEGGQLTEAVRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  VLLQ+ D+GRLTD KG+T++ K+ + +MTSNL +  +   ALQ
Sbjct: 678 SVVLFDEIEKAHPDVFNVLLQVLDDGRLTDSKGRTVDFKNTVLIMTSNLGAQALHAEALQ 737

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                  D       ++ V++ +L++ F R EFL R+++IV F 
Sbjct: 738 -----------------------DEAAFEQAREQVME-VLRQSF-RPEFLNRVDDIVIFR 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +++L  +V   L    +   ++H    + D     +   GYD  YGAR +K  ++R 
Sbjct: 773 PLGEAQLVHIVDLRLKDLEQLLKERHITIELTDAARHQLFLSGYDRAYGARPLKRAMQRL 832

Query: 552 VVSQLA 557
           +   LA
Sbjct: 833 IQDPLA 838


>gi|340352261|ref|ZP_08675144.1| chaperone protein ClpB [Prevotella pallens ATCC 700821]
 gi|339614638|gb|EGQ19329.1| chaperone protein ClpB [Prevotella pallens ATCC 700821]
          Length = 862

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 125/300 (41%), Positives = 182/300 (60%), Gaps = 24/300 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI+ ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEEELHKRVIGQDEAISAVANAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDET-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S  I Q          EF+
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRMVNFKNTIIIMTSNLGSQYIQQ----------EFA 728

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
           K T +  +    N   T+    K  +          R EFL RI+E + FLP ++SE+  
Sbjct: 729 KLTDNNRQEVIDNARNTVMDMLKQTI----------RPEFLNRIDETIMFLPLTQSEIAQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  +L    +  L      + W D  VE +   GYD  +GAR +K  ++R V++ L+ A
Sbjct: 779 IVTLQLK-RVEAMLAPQGFTLKWTDSAVEYLTKVGYDPEFGARPVKRAIQRYVLNDLSKA 837


>gi|345883482|ref|ZP_08834925.1| chaperone ClpB [Prevotella sp. C561]
 gi|345043773|gb|EGW47826.1| chaperone ClpB [Prevotella sp. C561]
          Length = 862

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/298 (42%), Positives = 183/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V +LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDES-MMTRIDMSEYQEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q    L       +
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFEHLND-----T 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I K++ + +D              +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 734 NREEVIDKAKIAVMD--------------MLKKTI-RPEFLNRIDETIMFLPLTKDQIGG 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K+ L+   IN+ W       L+D GYD  +GAR +K  ++R V++ L+
Sbjct: 779 VVRLQLE-RVKEMLEPQGINLEWTDPAINYLSDVGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|220925227|ref|YP_002500529.1| ATP-dependent chaperone ClpB [Methylobacterium nodulans ORS 2060]
 gi|219949834|gb|ACL60226.1| ATP-dependent chaperone ClpB [Methylobacterium nodulans ORS 2060]
          Length = 878

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/370 (36%), Positives = 216/370 (58%), Gaps = 40/370 (10%)

Query: 193 LHYGVVAG-NTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQRE 251
           L YG++ G   E+ E+  +S AD T  + SG +     E+A     +     ++  +  +
Sbjct: 502 LAYGIIPGLERELAEIEARS-ADGTRGNGSGLM-----EEAVTPNHVASVVSRWTGVPVD 555

Query: 252 K--EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           K  E E  +   +E+ L  R+VGQ  A+  ++ A++R   G  D + P+  F+FLG +G+
Sbjct: 556 KMLEGEREKLLAMEEALSKRVVGQREAVEAVATAVRRARAGLQDPNRPIGSFMFLGPTGV 615

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D + A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++
Sbjct: 616 GKTELTKALANFLF-DDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRR 674

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P  VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + VMTSNL +  +   
Sbjct: 675 RPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLVMTSNLGAEYL--- 731

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
                            +++ +G + D       +D V+  +++ HF R EFL R++EI+
Sbjct: 732 -----------------VTQPEGQDTDA-----VRDEVMA-VVRGHF-RPEFLNRVDEII 767

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHE 547
            F    ++E+  +V  +L    +K LD+  I +  + D    LA+ GYD  YGAR +K  
Sbjct: 768 LFHRLKRAEMGAIVDIQLGRL-QKLLDERKITLEVEPDARAWLAERGYDPAYGARPLKRV 826

Query: 548 VERQVVSQLA 557
           +++ V   LA
Sbjct: 827 IQKAVQDPLA 836


>gi|254560110|ref|YP_003067205.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
 gi|254267388|emb|CAX23225.1| protein disaggregation chaperone [Methylobacterium extorquens DM4]
          Length = 874

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/325 (40%), Positives = 193/325 (59%), Gaps = 31/325 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 557 EGEREKLLAMEEALGKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL           
Sbjct: 676 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNL----------- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G E+    P+     G + D       +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 725 ----GAEYLVNQPA-----GQDTDA-----VRDEVMG-VVRGHF-RPEFLNRVDEIILFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L   A K L+   I +  D    T LAD GYD  YGAR +K  +++
Sbjct: 769 RLARSEMGAIVDIQLGRLA-KLLEDRKITLDVDEAARTWLADKGYDPAYGARPLKRVIQK 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
            V   LA A    VI  G  V + V
Sbjct: 828 NVQDPLAEAILSGVIHDGETVAIRV 852


>gi|91204090|emb|CAJ71743.1| strongly similar to ATP-dependent protease Clp (chain B)
           [Candidatus Kuenenia stuttgartiensis]
          Length = 864

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/307 (42%), Positives = 194/307 (63%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E+ +   +E+RLK+R+VGQE AI+ +S  I+R   G  D + P+  FLFLG +G+GKT
Sbjct: 559 ESEKEKLLKMEERLKERVVGQEEAISAVSNGIRRARAGLQDPNRPIGTFLFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ E+H VA+LIGAPPGY+G+++GG+LT+ +++ P 
Sbjct: 619 ELCKALAAFLF-DNEDAMVRIDMSEFMEQHSVARLIGAPPGYVGYEEGGRLTEAIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVLFDE++KAH DV  VLLQ+FD+GRLTDG G+T++ K+ I VMTSN+AS  I      
Sbjct: 678 AVVLFDEIEKAHRDVFNVLLQVFDDGRLTDGHGRTVDFKNTIIVMTSNIASQWIQDLT-- 735

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              E EE  KR                        V+  LK  FR  EFL RI+E + F 
Sbjct: 736 -GPENEEELKRE-----------------------VKQALKETFR-PEFLNRIDETIVFH 770

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
             SK  +  +   +LN   K+ L ++N+ + V D   ET++ +GYD H+GAR +K  +++
Sbjct: 771 SLSKELIKQIADIQLNDLRKR-LARNNLKLTVTDRVKETLIEEGYDPHFGARPLKRTIQQ 829

Query: 551 QVVSQLA 557
            + + L+
Sbjct: 830 LIENPLS 836


>gi|325954928|ref|YP_004238588.1| ATP-dependent chaperone ClpB [Weeksella virosa DSM 16922]
 gi|323437546|gb|ADX68010.1| ATP-dependent chaperone ClpB [Weeksella virosa DSM 16922]
          Length = 869

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/354 (37%), Positives = 216/354 (61%), Gaps = 26/354 (7%)

Query: 206 ELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQR 265
           E+ L    +   KD S  +  +Y +  +I +++ K+    A  Q+  ++E  +   LE  
Sbjct: 506 EVRLAQAEENLSKDKSNKLVKEYVDADDIAEVVSKWTGVPA--QKMMQSEREKLLHLEAD 563

Query: 266 LKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRD 324
           L  R++GQ+ AI  ++ AI+R   G +D+  P+  FLFLGS+G+GKTELAK LA Y+  D
Sbjct: 564 LHKRVIGQDEAIEAVADAIRRSRAGLSDEGKPIGSFLFLGSTGVGKTELAKALAEYLF-D 622

Query: 325 KKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHP 384
            + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P +V+L DE++KAHP
Sbjct: 623 DENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEMEKAHP 682

Query: 385 DVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTP 444
           DV  +LLQ+ D+GRLTD KG+ I  K+ I +MTSN  ++ I +              R  
Sbjct: 683 DVFNILLQVLDDGRLTDNKGRYINFKNTIIIMTSNFGAHTILE--------------RFE 728

Query: 445 SISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCR 504
           +I+    S    T+ +  K+ V +  LK+ F R EFL RI+EI+ F P S++++  +V  
Sbjct: 729 NITDENAS----TVYQETKEVVFEE-LKQGF-RPEFLNRIDEIILFKPLSENQISGIVGL 782

Query: 505 ELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
            ++  A+K L + +I I    +    LA  GY+  +GAR +K  +++ V+++L+
Sbjct: 783 YMDSVARK-LAQRDITIDITPEATAYLAQKGYNPQFGARPLKRVIQQDVLNELS 835


>gi|227494319|ref|ZP_03924635.1| endopeptidase Clp [Actinomyces coleocanis DSM 15436]
 gi|226832053|gb|EEH64436.1| endopeptidase Clp [Actinomyces coleocanis DSM 15436]
          Length = 885

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 199/307 (64%), Gaps = 21/307 (6%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E ++   +E+ L  R++GQ++A+  +S A++R   G +D + P   FLFLG +G+GKT
Sbjct: 565 QGETQKLLQMEEELGKRLIGQKAAVIAVSDAVRRARAGVSDPNRPTGSFLFLGPTGVGKT 624

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 625 ELAKSLADFLFDDER-AIVRIDMSEYSEKHAVARLVGAPPGYVGYEEGGQLTEAVRRRPY 683

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHP+V  +LLQ+ D+GRLTDG+G+ ++ ++AI V+TSNL           
Sbjct: 684 SVVLLDEVEKAHPEVFNILLQVLDDGRLTDGQGRVVDFRNAIIVLTSNL----------- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G +F  +  S+S++  +  + TIS   ++ V+Q +  R   + EFL R++EI+ F 
Sbjct: 733 ----GSQFLTQGTSLSENPENTSETTISSEQQEAVMQVV--RSVFKPEFLNRLDEIITFQ 786

Query: 492 PFSKSELHTLVCRELNFWAKK-ALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
           P  K EL  +V  ++  +A + A+ +  +NI      + +  +GYD  YGAR ++  V+R
Sbjct: 787 PLQKHELAQIVDLQIREFANRLAVRRIRLNISEGAK-QWLTENGYDPAYGARPLRRLVQR 845

Query: 551 QVVSQLA 557
           +V  +LA
Sbjct: 846 EVGDKLA 852


>gi|347758181|ref|YP_004865743.1| ATP-dependent chaperone ClpB [Micavibrio aeruginosavorus ARL-13]
 gi|347590699|gb|AEP09741.1| ATP-dependent chaperone ClpB [Micavibrio aeruginosavorus ARL-13]
          Length = 870

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/384 (37%), Positives = 216/384 (56%), Gaps = 49/384 (12%)

Query: 221 SGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINII 280
           +G +  +  ED +I  ++ K+     D  +  E E  +   ++++L +R+VGQE+A++ +
Sbjct: 525 TGAMIKEQVEDDDIAAVVSKWTGIPVD--KMLEGERDKLLKMDEKLMERVVGQEAAVHAV 582

Query: 281 SAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQE 339
           S A++R   G  D   P+  FLFLG +G+GKTEL K LA ++  D   A IRLDMSEY E
Sbjct: 583 SNAVRRARAGLQDPRRPIGSFLFLGPTGVGKTELTKALAEFLF-DDDTALIRLDMSEYME 641

Query: 340 KHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRL 399
           KH VA++IGAPPGY+G+++GG LT+ +++ P  VVLFDEV+KAHPDV  VLLQ+ D+GRL
Sbjct: 642 KHSVARMIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRL 701

Query: 400 TDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSK-RTPSISKSQGSNLDVTI 458
           TDG+G+T++  + + +MTSNL ++ +        KEGE+  K R P              
Sbjct: 702 TDGQGRTVDFSNTVLIMTSNLGADHLVNQ-----KEGEDVEKVRGP-------------- 742

Query: 459 SRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHN 518
                   V   +++ FR  EFL R++EI+ F    + ++  +V  +L +  K   DK  
Sbjct: 743 --------VMEAVRKAFR-PEFLNRLDEILLFRRLGRDQMAGIVEIQLGYLRKLLADKR- 792

Query: 519 INIVWDIDVETI--LAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
             I  ++D + I  LAD GYD  YGAR +K  ++  + + LA    +  I  GS V + V
Sbjct: 793 --ITLEMDAKAIQWLADKGYDPAYGARPLKRVIQNTMQNPLAGMILQGDIRDGSTVAVTV 850

Query: 576 QWSKEVSEDSAKGGIIKLKVKKKG 599
                      KG  +  KV K G
Sbjct: 851 ----------GKGDQLDFKVTKTG 864


>gi|66802530|ref|XP_635137.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
 gi|60463456|gb|EAL61641.1| AAA ATPase domain-containing protein [Dictyostelium discoideum AX4]
          Length = 886

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 198/307 (64%), Gaps = 25/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E++R   L   L +R+VGQ+ A++ ++ A+ R ++G   ++ PL  FLFLG +G+GKT
Sbjct: 555 QTEKQRLLSLADHLHNRVVGQDEAVDAVADAVLRSKSGLARENQPLGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+    +R+DMSEY E+H V++LIGAPPGY+G+D GGQLT+ +++ P 
Sbjct: 615 ELAKALALELFDDESH-MVRIDMSEYMEQHSVSRLIGAPPGYVGYDQGGQLTEAVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAH  V  VLLQ+ DEGRLTDG+G+T++  + + +MTSNL S  I     Q
Sbjct: 674 SVVLFDEVEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSNVVIIMTSNLGSQYILGE--Q 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             KEG              G+N   ++S+  KD V+  + ++HF R EFL R+++I+ F 
Sbjct: 732 ANKEG--------------GNN---SLSQACKDKVIDEV-RKHF-RPEFLNRLDDIIVFT 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
           P SK  LH+++  +L    K+ L+  N+++    D +++I+   YD  +G R +K  +E+
Sbjct: 773 PLSKENLHSIITLQLRSVEKR-LEDQNMSLKISNDALDSIINAAYDPIFGGRPLKRYIEK 831

Query: 551 QVVSQLA 557
            +V++L+
Sbjct: 832 NIVTELS 838


>gi|365898598|ref|ZP_09436548.1| Chaperone [Bradyrhizobium sp. STM 3843]
 gi|365420664|emb|CCE09090.1| Chaperone [Bradyrhizobium sp. STM 3843]
          Length = 879

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 204/348 (58%), Gaps = 35/348 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD   K+N+G +  +     +I Q++ ++     D   E E E+  K  +E+ L  R+VG
Sbjct: 516 ADIEAKENAGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLK--MEESLGKRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A+  ++ A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+  A +R
Sbjct: 574 QAEAVRAVATAVRRSRAGLQDPNRPIGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S+          
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSE---------- 737

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA- 510
                      +D V+  + + HF R EFL R++EI+ F    KSE+  +V  E+ F   
Sbjct: 738 ----------VRDQVMATV-RAHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EIQFARL 783

Query: 511 KKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVERQVVSQLA 557
           +K L++  I +  D      LA  G+D  YGAR +K  ++R +   LA
Sbjct: 784 QKLLEERKIELSLDGAARDWLAVKGWDPAYGARPLKRVIQRHLQDPLA 831


>gi|296447416|ref|ZP_06889341.1| ATP-dependent chaperone ClpB [Methylosinus trichosporium OB3b]
 gi|296255036|gb|EFH02138.1| ATP-dependent chaperone ClpB [Methylosinus trichosporium OB3b]
          Length = 871

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/323 (40%), Positives = 194/323 (60%), Gaps = 31/323 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L  R+VGQ+ A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 553 EGEREKLLLMEDELARRVVGQKEAVAAVSTAVRRARAGLQDPNRPIGSFIFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D + A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELTKALASFLF-DDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ K+ + +MTSNL S       L 
Sbjct: 672 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTLIIMTSNLGS-----EFLV 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +++EGE+                    S    D V+Q +++ HF R EFL R++EIV F 
Sbjct: 727 MQQEGED--------------------STAVHDEVMQ-VVRAHF-RPEFLNRVDEIVLFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVER 550
              + ++  +V  +L    +K LD   I +  D     +L A GYD  YGAR +K  +++
Sbjct: 765 RLRREDMGAIVDIQLERL-QKLLDDRKIVLQLDEKARAVLAAKGYDPAYGARPLKRVIQK 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
           ++   LA A     I  GS VR+
Sbjct: 824 ELQDPLAEALLAGDIVDGSTVRV 846


>gi|262381636|ref|ZP_06074774.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_33B]
 gi|262296813|gb|EEY84743.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_33B]
          Length = 862

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 195/309 (63%), Gaps = 24/309 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AIN I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKDKLLRLESELHTRVIGQEEAINAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K TP+   +    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFEKMTPA---THDKVVDET-----KIQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ E+  +V  +LN   KK L  + + + +  +    +AD G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVSLQLN-SVKKMLATNGVALDFTNEAVDFIADKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLAAA 559
            V+++L+ A
Sbjct: 829 YVLNELSKA 837


>gi|255013436|ref|ZP_05285562.1| endopeptidase Clp ATP-binding chain B [Bacteroides sp. 2_1_7]
 gi|298376776|ref|ZP_06986731.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 3_1_19]
 gi|410103710|ref|ZP_11298631.1| chaperone ClpB [Parabacteroides sp. D25]
 gi|298266654|gb|EFI08312.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 3_1_19]
 gi|409236439|gb|EKN29246.1| chaperone ClpB [Parabacteroides sp. D25]
          Length = 862

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 195/309 (63%), Gaps = 24/309 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AIN I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKDKLLRLESELHTRVIGQEEAINAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K TP+   +    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFEKMTPA---THDKVVDET-----KIQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ E+  +V  +LN   KK L  + + + +  +    +AD G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVSLQLN-SVKKMLATNGVALDFTNEAVDFIADKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLAAA 559
            V+++L+ A
Sbjct: 829 YVLNELSKA 837


>gi|365885016|ref|ZP_09424039.1| Chaperone [Bradyrhizobium sp. ORS 375]
 gi|365286359|emb|CCD96570.1| Chaperone [Bradyrhizobium sp. ORS 375]
          Length = 879

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/348 (38%), Positives = 203/348 (58%), Gaps = 35/348 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD   K+N+G +  +     +I Q++ ++     D  +  E E+ +   +E  L  R+VG
Sbjct: 516 ADIEAKENAGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLRMEDSLGKRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A++ ++ A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+  A +R
Sbjct: 574 QFEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S+          
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSEVR-------- 739

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA- 510
                         +V   ++ HF R EFL R++EI+ F    KSE+  +V  E+ F   
Sbjct: 740 -------------ELVMGTVRSHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EIQFSRL 783

Query: 511 KKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVERQVVSQLA 557
           +K L++  I +  D D    L A G+D  YGAR +K  ++R V   LA
Sbjct: 784 QKLLEERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLA 831


>gi|256840120|ref|ZP_05545629.1| ATP-dependent chaperone ClpB [Parabacteroides sp. D13]
 gi|256739050|gb|EEU52375.1| ATP-dependent chaperone ClpB [Parabacteroides sp. D13]
          Length = 862

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 195/309 (63%), Gaps = 24/309 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AIN I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKDKLLRLESELHTRVIGQEEAINAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K TP+   +    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFEKMTPA---THDKVVDET-----KIQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ E+  +V  +LN   KK L  + + + +  +    +AD G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVSLQLN-SVKKMLATNGVALDFTNEALDFIADKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLAAA 559
            V+++L+ A
Sbjct: 829 YVLNELSKA 837


>gi|326336693|ref|ZP_08202861.1| chaperone protein ClpB [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691163|gb|EGD33134.1| chaperone protein ClpB [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 860

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/304 (41%), Positives = 189/304 (62%), Gaps = 24/304 (7%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKTELAK LA Y+  D + 
Sbjct: 565 RVVGQEEAIAAVSDAIRRSRAGLQDPKKPIGSFLFLGTTGVGKTELAKALAEYLF-DDEN 623

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++KAHPD  
Sbjct: 624 AMTRIDMSEYQEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVVLLDEIEKAHPDTF 683

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S+ I Q + +  K+ E+ +++     
Sbjct: 684 NILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGSHLI-QESFENNKDIEQATEKA---- 738

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                          KD V+Q  L +   R EF+ RI++IV F P +++ +  +V  +LN
Sbjct: 739 ---------------KDEVLQ--LLKQTVRPEFINRIDDIVMFTPLTEANIKQIVRLQLN 781

Query: 508 FWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGK 567
              K    ++ +    D  ++ +   GYD  +GAR +K  ++++V++ L+    K  I  
Sbjct: 782 AIIKLVARENILLEATDEAIDYLAKKGYDPQFGARPVKRVLQKEVMNALSKEILKGSIKA 841

Query: 568 GSFV 571
           GS V
Sbjct: 842 GSIV 845


>gi|357042124|ref|ZP_09103830.1| chaperone ClpB [Prevotella histicola F0411]
 gi|355369583|gb|EHG16974.1| chaperone ClpB [Prevotella histicola F0411]
          Length = 864

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/300 (41%), Positives = 187/300 (62%), Gaps = 24/300 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 561 LEDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 620

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 621 LFNDES-MLTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 679

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q   +L       +
Sbjct: 680 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQFIQQEFEKLND-----T 734

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   ISK++ + +D              +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 735 NREEVISKAKTTVMD--------------MLKKTI-RPEFLNRIDETIMFLPLTKEQIGG 779

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  +L    K+ L    +++ W D  ++ +   GYD  +GAR +K  ++R V++ L+ +
Sbjct: 780 VVRLQLE-RVKEILRAQGVDLQWTDPAIDYLAEVGYDPEFGARPVKRAIQRYVLNDLSKS 838


>gi|228990252|ref|ZP_04150220.1| Chaperone protein clpB 1 [Bacillus pseudomycoides DSM 12442]
 gi|228769491|gb|EEM18086.1| Chaperone protein clpB 1 [Bacillus pseudomycoides DSM 12442]
          Length = 866

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 192/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A+++++ A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQIIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSG----HLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D TI    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLQEDGTIKEEARD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     + +D+H    + ++  E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLIDRHITVELTEVAKEFVVESGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|301310109|ref|ZP_07216048.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 20_3]
 gi|423336350|ref|ZP_17314097.1| chaperone ClpB [Parabacteroides distasonis CL09T03C24]
 gi|300831683|gb|EFK62314.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 20_3]
 gi|409240825|gb|EKN33599.1| chaperone ClpB [Parabacteroides distasonis CL09T03C24]
          Length = 862

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 195/309 (63%), Gaps = 24/309 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AIN I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKDKLLRLESELHTRVIGQEEAINAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K TP+   +    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFEKMTPA---THDKVVDET-----KIQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ E+  +V  +LN   KK L  + + + +  +    +AD G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVSLQLN-SVKKMLATNGVALDFTNEALDFIADKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLAAA 559
            V+++L+ A
Sbjct: 829 YVLNELSKA 837


>gi|423331641|ref|ZP_17309425.1| chaperone ClpB [Parabacteroides distasonis CL03T12C09]
 gi|409230211|gb|EKN23079.1| chaperone ClpB [Parabacteroides distasonis CL03T12C09]
          Length = 862

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 195/309 (63%), Gaps = 24/309 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AIN I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKDKLLRLESELHTRVIGQEEAINAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K TP+   +    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFEKMTPA---THDKVVDET-----KIQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ E+  +V  +LN   KK L  + + + +  +    +AD G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVSLQLN-SVKKMLATNGVALDFTNEAVDFIADKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLAAA 559
            V+++L+ A
Sbjct: 829 YVLNELSKA 837


>gi|307729784|ref|YP_003907008.1| ATPase AAA-2 domain-containing protein [Burkholderia sp. CCGE1003]
 gi|307584319|gb|ADN57717.1| ATPase AAA-2 domain protein [Burkholderia sp. CCGE1003]
          Length = 962

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/301 (42%), Positives = 189/301 (62%), Gaps = 26/301 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +E RL  R++GQE AI  +S A++R   G      PL VFLFLG +G+GKTELAK LA  
Sbjct: 588 MESRLHKRVIGQEEAIGAVSDAVRRSRAGLQSRRQPLAVFLFLGPTGVGKTELAKALAEV 647

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+ +A +R+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P++V+L DE++
Sbjct: 648 VFGDE-DAIVRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPHSVILLDEIE 706

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + + + TSNLAS  I              S
Sbjct: 707 KAHPDVYNVLLQVFDDGRLTDGKGRVVDFTNTLIIATSNLASEVIMG-----------TS 755

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQP-------ILKRHFRRDEFLGRINEIVYFLPF 493
           +  P     QG       +R  K+  ++P       +L+ HF R EFL RI+EI+ F   
Sbjct: 756 RSRPGF--MQGETGHAPGTRTAKERQLEPVREGVMAVLRSHF-RPEFLNRIDEIIIFESL 812

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVERQV 552
           S  ++ ++V  +L+  A+ A  + +I+I +D  V   LA + Y   YGAR ++  + RQV
Sbjct: 813 SAEQIRSIVRLQLDQVARVARSQ-DIDIEFDEGVVDHLATEAYRPEYGARELRRRI-RQV 870

Query: 553 V 553
           +
Sbjct: 871 I 871


>gi|312129428|ref|YP_003996768.1| ATP-dependent chaperone clpb [Leadbetterella byssophila DSM 17132]
 gi|311905974|gb|ADQ16415.1| ATP-dependent chaperone ClpB [Leadbetterella byssophila DSM 17132]
          Length = 863

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/319 (39%), Positives = 192/319 (60%), Gaps = 26/319 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LEQ L+ R+ GQ+ AI ++S A++R   G  D   P+  FLFLGS+G+GKTELAK LA Y
Sbjct: 554 LEQELEKRVAGQKEAIQVVSDAVRRSRAGMQDPKKPIGSFLFLGSTGVGKTELAKTLANY 613

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D   A +R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +V+L DE++
Sbjct: 614 LFNDDN-AMVRIDMSEYQEKHTVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIE 672

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  VLLQ+ D+GRLTD KG+    K+ I +MTSN+ S+ I    L+  K G +  
Sbjct: 673 KAHPDVWNVLLQVLDDGRLTDNKGRVANFKNTIIIMTSNIGSHLIQDKYLEASKAGAD-- 730

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILK--RHFRRDEFLGRINEIVYFLPFSKSEL 498
                              +++KD  V+ +++  +   R EFL RI+EIV F P  + E+
Sbjct: 731 ----------------AWEKYYKDEAVEQVMELLKSSVRPEFLNRIDEIVLFDPLGREEI 774

Query: 499 HTLVCRELNFWAKKA-LDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQL 556
             +V   + F   KA L +  I +   D  ++ +   GYD  +GAR +K  ++R ++++L
Sbjct: 775 RKIVA--IQFDGIKARLQEQGIYLDATDEALDRLGEQGYDPVFGARPLKRVIQRNILNEL 832

Query: 557 AAAHEKSVIGKGSFVRLYV 575
           +       + K   + L V
Sbjct: 833 SKMILSGTVNKDKVILLDV 851


>gi|387133735|ref|YP_006299707.1| ATP-dependent chaperone protein ClpB [Prevotella intermedia 17]
 gi|386376583|gb|AFJ08016.1| ATP-dependent chaperone protein ClpB [Prevotella intermedia 17]
          Length = 862

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/293 (42%), Positives = 179/293 (61%), Gaps = 24/293 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R++GQE AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y+  D+  
Sbjct: 567 RVIGQEEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALAEYLFNDET- 625

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV 
Sbjct: 626 MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVF 685

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ D+G LTD KG+ +  K+ I +MTSNL S  I Q    L +E      R  SI 
Sbjct: 686 NILLQVLDDGHLTDNKGRVVNFKNTIIIMTSNLGSQYIQQEFANLTEEN-----RQESID 740

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
            ++               +V  +LK++  R EFL RI+E + FLP ++SE+  +V  +LN
Sbjct: 741 NAR--------------DIVMEMLKQNI-RPEFLNRIDETIMFLPLTQSEISEIVTLQLN 785

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAA 559
              K  L      + W  +    LA  GYD  +GAR +K  ++R V++ L+ A
Sbjct: 786 -RVKAMLAPQGFALNWTDNAVAYLAKVGYDPEFGARPVKRAIQRYVLNDLSKA 837


>gi|339446255|ref|YP_004712259.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
 gi|338906007|dbj|BAK45858.1| hypothetical protein EGYY_28870 [Eggerthella sp. YY7918]
          Length = 907

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/359 (37%), Positives = 210/359 (58%), Gaps = 26/359 (7%)

Query: 217 VKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESA 276
           VK   G I  +   D  I +++  +      +Q+  + E  +   LE++L +R+VGQ+ A
Sbjct: 529 VKQQDGAILKEEVSDDEIAEVVSTWT--GIPVQKMMQGEMAKLIDLEEKLHERVVGQDEA 586

Query: 277 INIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMS 335
           ++ ++ AI+R   G +D D P+  FLFLG +G+GKTELAK LA Y+  D +++ +R+DMS
Sbjct: 587 VSAVAGAIRRNRAGLSDPDRPIGSFLFLGPTGVGKTELAKALAEYLF-DSEKSMVRIDMS 645

Query: 336 EYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFD 395
           EY EK  V +LIGAPPGY+G+D+GGQLT+ +++ P +V+L DE++KAHPDV  +LLQ+ D
Sbjct: 646 EYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIEKAHPDVFNILLQVLD 705

Query: 396 EGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQ----- 450
           +GRLTDG+G+ +  K+AI +MTSN+ S  I            EFS +  S S  Q     
Sbjct: 706 DGRLTDGQGRVVSFKNAIIIMTSNVGSQSI-----------REFSNQGGSGSMGQMMEDM 754

Query: 451 -GSNLDVTISRHFKDHV-VQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNF 508
              ++  T  R  +    +   L+  F R EFL RI++I+ F   S   +  +V  +LN 
Sbjct: 755 MSGDIASTAKRLAELQTQINDALRATF-RPEFLNRIDDIITFNALSIEAMEPIVELQLND 813

Query: 509 WAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGK 567
              +  D+     V    +E +  DGYD  +GAR ++  ++R+VV ++A   +K V GK
Sbjct: 814 VRDRLADRRITLDVTPAAMEHLSIDGYDPVFGARPLRRLIQREVVDRIA---QKVVEGK 869


>gi|456358085|dbj|BAM92530.1| chaperone [Agromonas oligotrophica S58]
          Length = 879

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/348 (38%), Positives = 202/348 (58%), Gaps = 35/348 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD   K+N+G +  +     +I Q++ ++     D  +  E E+ +   +E  L  R+VG
Sbjct: 516 ADIEAKENAGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLRMEDSLGKRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A++ ++ A++R   G  D   P+  F+FLG +G+GKTEL K LA Y+  D+  A +R
Sbjct: 574 QFEAVHAVATAVRRSRAGLQDPHRPMGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + +MTSNL S+ +         EGE+ S+          
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSDFLVNQP-----EGEDTSEVR-------- 739

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA- 510
                         +V   ++ HF R EFL R++EI+ F    KSE+  +V  E+ F   
Sbjct: 740 -------------ELVMGTVRSHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EIQFARL 783

Query: 511 KKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVERQVVSQLA 557
            K L++  I +  D D    L A G+D  YGAR +K  ++R V   LA
Sbjct: 784 SKLLEERKITLSLDADARDWLAAKGWDPAYGARPLKRVIQRSVQDPLA 831


>gi|429749270|ref|ZP_19282403.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           332 str. F0381]
 gi|429168701|gb|EKY10519.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           332 str. F0381]
          Length = 861

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 201/334 (60%), Gaps = 25/334 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE  L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLKLESELHKRVVGQEEAIEAVSDAIRRSRAGLQDPRRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGS-----HLIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K      ++  ++         K+ V+Q  L +   R EFL RI++I+ F 
Sbjct: 725 -----EAFEKYANDTERAIETS---------KNEVLQ--LLKQTVRPEFLNRIDDIIMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P + + + ++V  +L+    K + K  I I   D  V+ +   G+D  +GAR +K  +++
Sbjct: 769 PLNANNIRSIVRLQLDAVI-KMVAKEGITIQATDEAVDYLAQKGFDPQFGARPVKRIIQK 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSED 584
           +V+++L+       + K S ++L V   K V E+
Sbjct: 828 EVLNRLSKEILGGSVHKDSVIKLLVADGKLVFEN 861


>gi|217967288|ref|YP_002352794.1| ATPase [Dictyoglomus turgidum DSM 6724]
 gi|217336387|gb|ACK42180.1| ATPase AAA-2 domain protein [Dictyoglomus turgidum DSM 6724]
          Length = 894

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 128/328 (39%), Positives = 204/328 (62%), Gaps = 28/328 (8%)

Query: 255 EERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           E  R   LE++L +R+VGQ+ AI  +S AI+    G  + + P+  FLFLG +G+GKTEL
Sbjct: 577 ERERLLKLEEKLHERVVGQDEAIKAVSDAIRLARAGLREKNRPIATFLFLGPTGVGKTEL 636

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           A+ LA+ +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+++GGQLT+++++ P +V
Sbjct: 637 ARALAWAVFGDE-DAIIRIDMSEYMERHTVSRLIGAPPGYVGYEEGGQLTEKVRRRPYSV 695

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           +L DE++KAHPDV  +LLQ+FD GRLTDGKG+ ++  + I +MTSN+ S+ I Q  L   
Sbjct: 696 ILLDEIEKAHPDVHNILLQVFDAGRLTDGKGRVVDFTNTIIIMTSNIGSD-IIQANLS-- 752

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
                             +  D       K+ ++  ILKR+FR  EFL RI+EI+ F   
Sbjct: 753 -----------------AAGRDKLSYEQLKEKLMD-ILKRYFR-PEFLNRIDEIIVFHAL 793

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQV 552
           +K ++  +V  +L    ++     NI +++D  V   LAD GY   +GAR +K ++  ++
Sbjct: 794 TKEQVRDIVKLQLE-RVRRTARAQNIELIFDESVVDFLADIGYSPEFGARELKRKIRNEL 852

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
            ++LA A  +  + +G   ++ V+++KE
Sbjct: 853 ETKLAKAMLEGAVQEGD--KIMVRYNKE 878


>gi|265756195|ref|ZP_06090524.1| ATP-dependent chaperone ClpB [Bacteroides sp. 3_1_33FAA]
 gi|345516500|ref|ZP_08795990.1| chaperone ClpB [Bacteroides dorei 5_1_36/D4]
 gi|423232186|ref|ZP_17218588.1| chaperone ClpB [Bacteroides dorei CL02T00C15]
 gi|423246737|ref|ZP_17227790.1| chaperone ClpB [Bacteroides dorei CL02T12C06]
 gi|229436999|gb|EEO47076.1| chaperone ClpB [Bacteroides dorei 5_1_36/D4]
 gi|263233786|gb|EEZ19395.1| ATP-dependent chaperone ClpB [Bacteroides sp. 3_1_33FAA]
 gi|392625250|gb|EIY19321.1| chaperone ClpB [Bacteroides dorei CL02T00C15]
 gi|392634713|gb|EIY28627.1| chaperone ClpB [Bacteroides dorei CL02T12C06]
          Length = 862

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 182/291 (62%), Gaps = 24/291 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA Y+  D + 
Sbjct: 567 RVVGQDEAIAAVSDAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALADYLF-DDES 625

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQEKH V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV 
Sbjct: 626 LMTRIDMSEYQEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVF 685

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I     ++  E            
Sbjct: 686 NILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSAYIQSQFEKINDE------------ 733

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                N +V I    K+  V  +LK+   R EFL RI+E + FLP ++ E+  +V  ++N
Sbjct: 734 -----NREVVIEETKKE--VMSMLKKTI-RPEFLNRIDETIMFLPLNREEIEQIVMLQIN 785

Query: 508 FWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
              K  L  + I + + D  V  I + GYD  +GAR +K  ++R +++ L+
Sbjct: 786 -GIKNMLAGNGITLEMTDEAVRFIASTGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|413961747|ref|ZP_11400975.1| ATPase [Burkholderia sp. SJ98]
 gi|413930619|gb|EKS69906.1| ATPase [Burkholderia sp. SJ98]
          Length = 911

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/343 (37%), Positives = 210/343 (61%), Gaps = 27/343 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   +E+RL  R++GQ+ A+  +S A++R   G    + P+ VFLFLG +G+GKT
Sbjct: 579 EEERARLLQMEERLHKRVIGQQEAVVAVSDAVRRARTGLQGRNRPIAVFLFLGPTGVGKT 638

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +   +++A +R+DMSEY E+H V++LIG+PPGY+G+D+GGQLT+R+++ P 
Sbjct: 639 ELAKALAEVVF-GEEDAMLRVDMSEYMERHAVSRLIGSPPGYVGYDEGGQLTERVRRRPY 697

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + + + TSNL S+ IA     
Sbjct: 698 SVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNLGSDVIAGQ--- 754

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                    KR      +  S+ D ++      + V  +L++HF R EFL RI++I+ F 
Sbjct: 755 ---------KRATLGFTTNASDADASVQ-----NGVMSVLRQHF-RPEFLNRIDDIILFS 799

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI--LAD-GYDVHYGARSIKHEV 548
              + E+  +V   L+   + A   H+ ++V + D   +  LAD GY   +GAR ++ ++
Sbjct: 800 SLGRDEVRQIVRLMLDQVQRLA---HSQDVVLEFDESVVDHLADVGYRPEFGARELRRQI 856

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL-YVQWSKEVSEDSAKGGI 590
            + + +QLA    K  + +G+ V+  Y   +K ++ D  + G+
Sbjct: 857 RQSIENQLAKEMLKGDVTEGAQVKCHYDAENKRLAFDVKRAGL 899


>gi|325294725|ref|YP_004281239.1| ATPase AAA [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065173|gb|ADY73180.1| ATPase AAA-2 domain protein [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 844

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 216/366 (59%), Gaps = 40/366 (10%)

Query: 223 HIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISA 282
           ++P   AED  I +++ +     A   +E+E ++  K  +E+ L  R++GQE AI  IS 
Sbjct: 482 NVPVVTAED--IAEVISEMTGIPASKLQEEEIQKLLK--MEEELHKRVIGQERAIKAISE 537

Query: 283 AIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKH 341
           AI+R   G    + PL  FLFLG +G+GKTELAK LA Y+  D+  A IRLDMSEY EKH
Sbjct: 538 AIRRARAGLQPPNRPLGSFLFLGPTGVGKTELAKTLAEYLFGDET-AIIRLDMSEYMEKH 596

Query: 342 EVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTD 401
            V+KLIGAPPGY+G+++GGQLT+ +++ P +V+L DE++KAHPDV  +LLQ+ D+GRLTD
Sbjct: 597 AVSKLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPDVFNILLQILDDGRLTD 656

Query: 402 GKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRH 461
            KG+T++  + + +MTSN+ S    ++ + L K  EEF KR   I               
Sbjct: 657 AKGRTVDFSNTVIIMTSNVGS----EYLMNLSK--EEFEKRYDEI--------------- 695

Query: 462 FKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLV---CRELNFWAKKALDKHN 518
            K+ ++  + KR   R EFL RI+EI+ F P S+ E+  +V     +LN    K L+   
Sbjct: 696 -KEQIMNELKKRF--RPEFLNRIDEIIIFHPLSEEEIKQIVDLLITKLN----KRLEDRG 748

Query: 519 INIVWDIDVETILA-DGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQW 577
           I IV   + ++ LA  GY   +GAR ++  ++R + + L+    +  +  G  V+  + +
Sbjct: 749 IKIVLTEEAKSALAKKGYVPEFGARPLRRTIQRDIETPLSVKILEGTVKDGDKVK--IDY 806

Query: 578 SKEVSE 583
            KE  E
Sbjct: 807 DKEKGE 812


>gi|254419857|ref|ZP_05033581.1| ATPase, AAA family [Brevundimonas sp. BAL3]
 gi|196186034|gb|EDX81010.1| ATPase, AAA family [Brevundimonas sp. BAL3]
          Length = 862

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/307 (42%), Positives = 186/307 (60%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ+ A+  +S A++R   G  D + PL  FLFLG +G+GKT
Sbjct: 554 EGEREKLLKMEEALGGRVVGQDEALAAVSDAVRRARAGLNDPNRPLGSFLFLGPTGVGKT 613

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D + A  RLDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 614 ELTKALAEFLF-DDEAAITRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPY 672

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+TI+ ++ + +MTSNL S  +A+    
Sbjct: 673 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTIDFRNTLIIMTSNLGSQYLAE---- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             QG   DV   R F    V   ++ HF R EFL RI+EI+ F 
Sbjct: 729 ------------------QGEGDDVEAVRPF----VMDAVRAHF-RPEFLNRIDEIILFH 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              + ++  +V  +L+ + K   D+  +N+  D      LAD GYD  YGAR +K  +++
Sbjct: 766 RLGREQMGGIVRIQLSRFEKLLADRR-LNLSLDDAALAWLADRGYDPAYGARPLKRVIQK 824

Query: 551 QVVSQLA 557
           ++V  +A
Sbjct: 825 ELVDPIA 831


>gi|344204724|ref|YP_004789867.1| ATP-dependent chaperone ClpB [Muricauda ruestringensis DSM 13258]
 gi|343956646|gb|AEM72445.1| ATP-dependent chaperone ClpB [Muricauda ruestringensis DSM 13258]
          Length = 866

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 191/307 (62%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQ+ AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLQLEDVLHKRVVGQDEAIIAVSDAIRRSRAGLQDAKKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + +  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKTLAAYLF-DDENSITRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+  + K++I +MTSN+ S     H +Q
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNSIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F       S S+ + ++V              L R   R EFL RI++I+ F 
Sbjct: 725 -----EKFEDAVDLESASESARIEVL------------GLLRKTIRPEFLNRIDDIIMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P SKS++  +V  +L+   KK L K NI +   +  ++ +   G+D  YGAR +K  +++
Sbjct: 768 PLSKSDIKDIVGLQLDNL-KKMLTKQNITLDATEEAIDYLATKGFDPQYGARPVKRLIQK 826

Query: 551 QVVSQLA 557
           +V++ L+
Sbjct: 827 EVLNNLS 833


>gi|294776288|ref|ZP_06741772.1| ATP-dependent chaperone protein ClpB [Bacteroides vulgatus PC510]
 gi|319641439|ref|ZP_07996131.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 3_1_40A]
 gi|345520331|ref|ZP_08799727.1| chaperone ClpB [Bacteroides sp. 4_3_47FAA]
 gi|423314457|ref|ZP_17292391.1| chaperone ClpB [Bacteroides vulgatus CL09T03C04]
 gi|254836680|gb|EET16989.1| chaperone ClpB [Bacteroides sp. 4_3_47FAA]
 gi|294449875|gb|EFG18391.1| ATP-dependent chaperone protein ClpB [Bacteroides vulgatus PC510]
 gi|317386958|gb|EFV67845.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 3_1_40A]
 gi|392682272|gb|EIY75618.1| chaperone ClpB [Bacteroides vulgatus CL09T03C04]
          Length = 862

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 182/291 (62%), Gaps = 24/291 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA Y+  D + 
Sbjct: 567 RVVGQDEAIAAVSDAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALADYLF-DDES 625

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQEKH V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV 
Sbjct: 626 LMTRIDMSEYQEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVF 685

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I     ++  E            
Sbjct: 686 NILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSAYIQSQFEKINDE------------ 733

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                N +V I    K+  V  +LK+   R EFL RI+E + FLP ++ E+  +V  ++N
Sbjct: 734 -----NREVVIEETKKE--VMSMLKKTI-RPEFLNRIDETIMFLPLNREEIEQIVMLQIN 785

Query: 508 FWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
              K  L  + I + + D  V  I + GYD  +GAR +K  ++R +++ L+
Sbjct: 786 -GIKNMLAGNGITLEMTDEAVRFIASTGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|212691841|ref|ZP_03299969.1| hypothetical protein BACDOR_01336 [Bacteroides dorei DSM 17855]
 gi|237708047|ref|ZP_04538528.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 9_1_42FAA]
 gi|423241999|ref|ZP_17223110.1| chaperone ClpB [Bacteroides dorei CL03T12C01]
 gi|212665597|gb|EEB26169.1| ATP-dependent chaperone protein ClpB [Bacteroides dorei DSM 17855]
 gi|229457875|gb|EEO63596.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 9_1_42FAA]
 gi|392640228|gb|EIY34033.1| chaperone ClpB [Bacteroides dorei CL03T12C01]
          Length = 862

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 182/291 (62%), Gaps = 24/291 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA Y+  D + 
Sbjct: 567 RVVGQDEAIAAVSDAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALADYLF-DDES 625

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQEKH V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV 
Sbjct: 626 LMTRIDMSEYQEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVF 685

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I     ++  E            
Sbjct: 686 NILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSAYIQSQFEKINDE------------ 733

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                N +V I    K+  V  +LK+   R EFL RI+E + FLP ++ E+  +V  ++N
Sbjct: 734 -----NREVVIEETKKE--VMSMLKKTI-RPEFLNRIDETIMFLPLNREEIEQIVMLQIN 785

Query: 508 FWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
              K  L  + I + + D  V  I + GYD  +GAR +K  ++R +++ L+
Sbjct: 786 -GIKNMLAGNGITLEMTDEAVRFIASTGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|150006304|ref|YP_001301048.1| endopeptidase Clp ATP-binding subunit B [Bacteroides vulgatus ATCC
           8482]
 gi|149934728|gb|ABR41426.1| endopeptidase Clp ATP-binding chain B [Bacteroides vulgatus ATCC
           8482]
          Length = 862

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 182/291 (62%), Gaps = 24/291 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA Y+  D + 
Sbjct: 567 RVVGQDEAIAAVSDAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALADYLF-DDES 625

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQEKH V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV 
Sbjct: 626 LMTRIDMSEYQEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVF 685

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I     ++  E            
Sbjct: 686 NILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSAYIQSQFEKINDE------------ 733

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                N +V I    K+  V  +LK+   R EFL RI+E + FLP ++ E+  +V  ++N
Sbjct: 734 -----NREVVIEETKKE--VMSMLKKTI-RPEFLNRIDETIMFLPLNREEIEQIVMLQIN 785

Query: 508 FWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
              K  L  + I + + D  V  I + GYD  +GAR +K  ++R +++ L+
Sbjct: 786 -GIKNMLAGNGITLEMTDEAVRFIASTGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|189460390|ref|ZP_03009175.1| hypothetical protein BACCOP_01029 [Bacteroides coprocola DSM 17136]
 gi|189432942|gb|EDV01927.1| ATP-dependent chaperone protein ClpB [Bacteroides coprocola DSM
           17136]
          Length = 862

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/298 (41%), Positives = 189/298 (63%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDESLMTRIDMSEYQEKHTVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S+ I     Q  K  ++  
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSSYIQS---QFEKINDQNH 735

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            +    +K++  N+                LK+   R EFL RI+E + F P +K+E+  
Sbjct: 736 DQVVEETKAEVMNM----------------LKKTI-RPEFLNRIDETIMFQPLNKNEIEQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++N   KK L+++ + + + D  V+ I   GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVRLQIN-GIKKMLEENGVTLQMSDQAVDFIATAGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|410084770|ref|ZP_11281491.1| ClpB protein [Morganella morganii SC01]
 gi|409768415|gb|EKN52475.1| ClpB protein [Morganella morganii SC01]
          Length = 812

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/386 (33%), Positives = 222/386 (57%), Gaps = 39/386 (10%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YG      ++ EL  +  A    +D    +  +   D  I +IL ++      + 
Sbjct: 453 MSELQYG------KIPELEKQLAAANAAEDKEMKLLRNKVTDVEIAEILARWT--GIPVS 504

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  E E  +   +EQ +  R++GQ+ A++ ++ AI+R   G +D + P+  FLFLG +G+
Sbjct: 505 RMLEGEREKLLRMEQVMHSRVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGV 564

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D  +A +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++
Sbjct: 565 GKTELCKALADFLF-DSDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 623

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I +H
Sbjct: 624 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDRIQEH 683

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
             +L  +              +G+ ++V +S HF              R EF+ RI+E+V
Sbjct: 684 FGELNYDA------------MKGAVMEV-VSHHF--------------RPEFINRIDEVV 716

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHE 547
            F P +K ++H +   +L    K+ L++H   + + D  ++ +   G+D  +GAR +K  
Sbjct: 717 VFHPLAKEQIHAIAKIQLKRLYKR-LEEHGYQVTITDSALDKLAEAGFDPVFGARPLKRA 775

Query: 548 VERQVVSQLAAAHEKSVIGKGSFVRL 573
           +++++ + +A A     +  G  + L
Sbjct: 776 IQQEIENPMAQAMLSGKLIPGKMITL 801


>gi|288956987|ref|YP_003447328.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
           B510]
 gi|288909295|dbj|BAI70784.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
           B510]
          Length = 867

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 224/402 (55%), Gaps = 41/402 (10%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREK 252
           L YGV+ G    +E  LK   +      S  + ++   D +I  ++ ++     D   + 
Sbjct: 503 LAYGVIPG----LEKALKDAEEHA----SSRMLNEEVRDGDIAAVVSRWTGVPVD---KM 551

Query: 253 EAEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGK 310
            A ER K   +E++L+ R++GQ+ AI  +S A++R   G  D + P+  FLFLG +G+GK
Sbjct: 552 LAGEREKLLAMEEKLRGRVIGQDEAIVAVSNAVRRARAGLQDPNRPIGSFLFLGPTGVGK 611

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TEL K LA ++  D + A +RLDMSEY EKH VA++IGAPPGY+G+++GG LT+ +++ P
Sbjct: 612 TELTKALAEFLF-DDETAMVRLDMSEYMEKHSVARMIGAPPGYVGYEEGGALTEAVRRRP 670

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL 430
             VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +A+ A 
Sbjct: 671 YQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVVIIMTSNLGSQALAEQA- 729

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
               EGE+                    S   +D V++ + + HF R EFL R++EI+ F
Sbjct: 730 ----EGED--------------------SAAVRDEVMEAV-RAHF-RPEFLNRLDEILLF 763

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
               +  +  +V  +L    +   D+     V +   E +   GYD  YGAR +K  ++R
Sbjct: 764 HRLDRRHMGGIVKIQLGRLTRMLADREITLTVDEAATEWLAEAGYDPVYGARPLKRVIQR 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIK 592
           ++ + LA    +  I  G  V +  +      +    GG+++
Sbjct: 824 ELQNPLATLILEGRIKDGQTVAVGAEAGSLTIDGQPVGGLVR 865


>gi|421494136|ref|ZP_15941488.1| CLPB [Morganella morganii subsp. morganii KT]
 gi|455738463|ref|YP_007504729.1| ClpB protein [Morganella morganii subsp. morganii KT]
 gi|400191693|gb|EJO24837.1| CLPB [Morganella morganii subsp. morganii KT]
 gi|455420026|gb|AGG30356.1| ClpB protein [Morganella morganii subsp. morganii KT]
          Length = 857

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/386 (33%), Positives = 222/386 (57%), Gaps = 39/386 (10%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YG      ++ EL  +  A    +D    +  +   D  I +IL ++      + 
Sbjct: 498 MSELQYG------KIPELEKQLAAANAAEDKEMKLLRNKVTDVEIAEILARWT--GIPVS 549

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  E E  +   +EQ +  R++GQ+ A++ ++ AI+R   G +D + P+  FLFLG +G+
Sbjct: 550 RMLEGEREKLLRMEQVMHSRVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGV 609

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D  +A +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++
Sbjct: 610 GKTELCKALADFLF-DSDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I +H
Sbjct: 669 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDRIQEH 728

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
             +L  +              +G+ ++V +S HF              R EF+ RI+E+V
Sbjct: 729 FGELNYDA------------MKGAVMEV-VSHHF--------------RPEFINRIDEVV 761

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHE 547
            F P +K ++H +   +L    K+ L++H   + + D  ++ +   G+D  +GAR +K  
Sbjct: 762 VFHPLAKEQIHAIAKIQLKRLYKR-LEEHGYQVTITDSALDKLAEAGFDPVFGARPLKRA 820

Query: 548 VERQVVSQLAAAHEKSVIGKGSFVRL 573
           +++++ + +A A     +  G  + L
Sbjct: 821 IQQEIENPMAQAMLSGKLIPGKMITL 846


>gi|291280297|ref|YP_003497132.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Deferribacter
           desulfuricans SSM1]
 gi|290754999|dbj|BAI81376.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Deferribacter
           desulfuricans SSM1]
          Length = 867

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/328 (39%), Positives = 202/328 (61%), Gaps = 30/328 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ+ AI  +S AI+R   G  D   P+  F+FLG +G+GKT
Sbjct: 557 EEEADKLIKMEEYLHKRVIGQDKAIKAVSEAIRRSRAGLNDPKRPIGSFIFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D ++A IR+DMSEY EKH VAKLIGAPPGY+G+++GGQLT+R+++ P 
Sbjct: 617 ELAKALAEFLF-DSEDAMIRIDMSEYMEKHAVAKLIGAPPGYVGYEEGGQLTERVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  +LLQ+ D+GRLTD KG+T+  ++ + +MTSN+ S+ I Q   +
Sbjct: 676 SVILLDEIEKAHPDVFNLLLQILDDGRLTDSKGRTVNFRNTVIIMTSNIGSDLIQQ---E 732

Query: 432 LRKEG--EEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
             KEG  EE  +R  ++   Q SN       +FK               EFL R+++I+ 
Sbjct: 733 FAKEGSWEEKYERIHNLVFHQLSN-------YFK--------------PEFLNRVDDIIV 771

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEV 548
           F P     L  +    LN +AK+ L ++NI + +D   ++ ++  GYD  +GAR +K  +
Sbjct: 772 FHPLGDEHLREIAKLLLNNFAKR-LAENNIEVEFDDSAIDMVVKAGYDPKFGARPMKRAI 830

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           +R + +++A    K  I +G  +++  Q
Sbjct: 831 QRLIENKIAEEIIKGNIKQGEKIKVVFQ 858


>gi|169830648|ref|YP_001716630.1| ATPase [Candidatus Desulforudis audaxviator MP104C]
 gi|169637492|gb|ACA58998.1| ATPase AAA-2 domain protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 862

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/395 (35%), Positives = 223/395 (56%), Gaps = 41/395 (10%)

Query: 184 NMTFLGFSALHYGVV-AGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYA 242
           N  F   + + YG++ A   E+ EL  +      +++  G +  +  ++ ++ +I+ K+ 
Sbjct: 495 NADFTRMAEIRYGIIPALQKELAELKTR------LENRPGRLLKEEVDEQDVAEIVAKWT 548

Query: 243 EKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFL 301
                + R  E E  R   LE+ L  R+VGQ  A+  ++ AI+R   G  D + P+  F+
Sbjct: 549 --GIPVSRMLEGETERLIRLEENLHRRVVGQHHAVTAVADAIRRARAGIGDPNRPMGSFM 606

Query: 302 FLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQ 361
           FLG +G+GKTELAK LA ++  D++ A  R DMSEY EKH VA+LIGAPPGY+G+++GGQ
Sbjct: 607 FLGPTGVGKTELAKALAEFLFNDER-ALQRFDMSEYMEKHAVARLIGAPPGYVGYEEGGQ 665

Query: 362 LTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLA 421
           LT+ +++ P AV+LFDE++KAHP+V  +LLQL D+GRLTDG G+T++  + + +MTSN+ 
Sbjct: 666 LTETVRRRPYAVLLFDEMEKAHPEVFNILLQLLDDGRLTDGHGRTVDFTNTVVIMTSNVG 725

Query: 422 SNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFL 481
           S+   + A + R E E                            +V   L++H  R EFL
Sbjct: 726 SHYFREMAGRPRTEIE---------------------------GLVLETLRQHL-RPEFL 757

Query: 482 GRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYG 540
            RI+EI+ F P     L  +V  +L   A + L K NI +    + + +LA +GYD  YG
Sbjct: 758 NRIDEILVFEPLGAEHLQAIVDIQLERLAAR-LAKQNITLEVTAEAKELLAREGYDQVYG 816

Query: 541 ARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           AR +K  +++++ + LA +     I  G  VR+ +
Sbjct: 817 ARPLKRVIQKRLENPLAKSILAGEITPGQEVRVTL 851


>gi|91783924|ref|YP_559130.1| ATP-dependent Clp protease, ATP- binding subunit [Burkholderia
           xenovorans LB400]
 gi|91687878|gb|ABE31078.1| Putative ATP-dependent Clp protease, ATP- binding subunit
           [Burkholderia xenovorans LB400]
          Length = 961

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/313 (42%), Positives = 199/313 (63%), Gaps = 21/313 (6%)

Query: 246 ADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLG 304
           ADL +E   E+ R   +E RL  R++GQE AI+ +S A++R   G      PL VFLFLG
Sbjct: 574 ADLTQE---EKTRLLQMEDRLHRRVIGQEEAISAVSDAVRRSRAGLQARHQPLAVFLFLG 630

Query: 305 SSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTK 364
            +G+GKTELAK LA  +  D+ +A +R+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+
Sbjct: 631 PTGVGKTELAKALAEVVFGDE-DAIVRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTE 689

Query: 365 RLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNE 424
           R+++ P++V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ I+  + + + TSNLAS+ 
Sbjct: 690 RVRRRPHSVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVIDFANTLIIATSNLASDV 749

Query: 425 IAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHV---VQPILKRHFRRDEFL 481
           I    +   ++   F      ++  +G+  D        D V   V  +L+ HF R EFL
Sbjct: 750 I----MGTPRKRPGFIAADNDLAADKGARKD-----RQPDGVREGVMTVLRSHF-RPEFL 799

Query: 482 GRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYG 540
            RI+EI+ F   +  ++ ++V  +L+  A  A    +I+IV+D  +   LA + Y   YG
Sbjct: 800 NRIDEIIIFESLNADQIRSIVRLQLDKVAHIA-KSQDIDIVFDDSIVDQLAKEAYRPEYG 858

Query: 541 ARSIKHEVERQVV 553
           AR ++  + RQV+
Sbjct: 859 ARELRRRI-RQVI 870


>gi|365888187|ref|ZP_09426975.1| Chaperone [Bradyrhizobium sp. STM 3809]
 gi|365336144|emb|CCD99506.1| Chaperone [Bradyrhizobium sp. STM 3809]
          Length = 879

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 134/348 (38%), Positives = 202/348 (58%), Gaps = 35/348 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD   K+ SG +  +     +I Q++ ++     D  +  E E+ +   +E  L  R+VG
Sbjct: 516 ADIEAKETSGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLRMEDSLGKRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A++ ++ A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+  A +R
Sbjct: 574 QFEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S+          
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSEVR-------- 739

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA- 510
                         +V   ++ HF R EFL R++EI+ F    KSE+  +V  E+ F   
Sbjct: 740 -------------ELVMGTVRSHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EIQFSRL 783

Query: 511 KKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVERQVVSQLA 557
           +K L++  I +  D D    L A G+D  YGAR +K  ++R V   LA
Sbjct: 784 QKLLEERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLA 831


>gi|260592293|ref|ZP_05857751.1| ATP-dependent chaperone protein ClpB [Prevotella veroralis F0319]
 gi|260535743|gb|EEX18360.1| ATP-dependent chaperone protein ClpB [Prevotella veroralis F0319]
          Length = 862

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 125/298 (41%), Positives = 183/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V +LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDES-MMTRIDMSEYQEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q    L       +
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFEHLND-----T 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I K++ + +D              +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 734 NREEVIDKAKVAVMD--------------MLKKTI-RPEFLNRIDETIMFLPLTKEQIGG 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K+ L+   IN+ W       L+D GY+  +GAR +K  ++R V++ L+
Sbjct: 779 VVRLQLE-RVKEMLEPQGINLEWTDPAINYLSDVGYNPEFGARPVKRAIQRYVLNDLS 835


>gi|315500966|ref|YP_004079853.1| ATP-dependent chaperone clpb [Micromonospora sp. L5]
 gi|315407585|gb|ADU05702.1| ATP-dependent chaperone ClpB [Micromonospora sp. L5]
          Length = 863

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/329 (38%), Positives = 195/329 (59%), Gaps = 31/329 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L+ R+VGQ  A+  +S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 558 EGETAKLLRMEETLRGRVVGQAEAVGAVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 618 ELAKALAEFLFDDER-AMVRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++AI ++TSNL S+ I+     
Sbjct: 677 SVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNAILILTSNLGSSVIS----- 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                  D+T++ + +   V  +++ HF + EFL R+++IV F 
Sbjct: 732 -----------------------DLTLTENERREGVLAVVRSHF-KPEFLNRLDDIVVFA 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
                +L ++V  +L+    +  D+     + D     +   GYD  YGAR ++  V+  
Sbjct: 768 ALQGEDLRSIVDIQLDRMRTRLADRRLALDISDSARNWLAEHGYDPIYGARPLRRLVQSA 827

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
           +  QLA A     I  G  VR+ +  SKE
Sbjct: 828 IGDQLAKALLAGDIRDGDTVRVDLSDSKE 856


>gi|156740924|ref|YP_001431053.1| ATPase [Roseiflexus castenholzii DSM 13941]
 gi|156232252|gb|ABU57035.1| ATPase AAA-2 domain protein [Roseiflexus castenholzii DSM 13941]
          Length = 871

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 120/297 (40%), Positives = 191/297 (64%), Gaps = 28/297 (9%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +E+RL  R+VGQ+ A++ ++ A++R   G  D + PL  FLFLG +G+GKTELA+ LA +
Sbjct: 565 MEERLHQRVVGQDEAVSAVANAVRRARAGLQDPNRPLGSFLFLGPTGVGKTELARALAEF 624

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D ++A +R+DMSEY EKH VA+LIGAPPGY+G+++GGQLT+ +++ P +VVLFDEV+
Sbjct: 625 LF-DDEQAMVRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEVE 683

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTDG G+ +  K+ + +MTSN+AS  I           +E +
Sbjct: 684 KAHPDVFNILLQILDDGRLTDGHGRVVNFKNTVIIMTSNIASPTI-----------QELA 732

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
           +R        G++ D+      +  V++ +  R   R EFL RI+EI+ F P S+ ++  
Sbjct: 733 QR--------GASQDI-----IRASVMEEL--RTQLRPEFLNRIDEIIVFKPLSREQIGQ 777

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +LN   +   D+     +     E ++A+GYD  +GAR +K  +++++ + LA
Sbjct: 778 IVEIQLNRLRRLLADRKISLELSPAAREKLVAEGYDPVFGARPLKRVIQQRIQNPLA 834


>gi|261880646|ref|ZP_06007073.1| chaperone ClpB [Prevotella bergensis DSM 17361]
 gi|270332599|gb|EFA43385.1| chaperone ClpB [Prevotella bergensis DSM 17361]
          Length = 862

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/310 (40%), Positives = 188/310 (60%), Gaps = 24/310 (7%)

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGI 308
           R  ++E  +   LE+ L +R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G 
Sbjct: 548 RMMQSEREKLLHLEKELHNRVIGQDEAIQAVADAVRRSRAGLQDPKKPIASFIFLGTTGT 607

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAK LA Y+  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++
Sbjct: 608 GKTELAKALAEYLFNDEN-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRR 666

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I + 
Sbjct: 667 KPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQER 726

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
              L         R   IS ++              H V  +LK+   R EFL RI++I+
Sbjct: 727 FADLND-----YNREEVISDTR--------------HNVMEMLKKTI-RPEFLNRIDDII 766

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHE 547
            FLP +K E+  +V  +L    +  L+   I I W  D    LA  GY+  +GAR +K  
Sbjct: 767 MFLPLTKQEIGQVVTLQLQH-VRNMLEPQGIRIEWTPDAVDWLAGVGYNPEFGARPVKRA 825

Query: 548 VERQVVSQLA 557
           ++  ++++L+
Sbjct: 826 IQEYMLNKLS 835


>gi|373499621|ref|ZP_09590027.1| chaperone ClpB [Prevotella micans F0438]
 gi|371957045|gb|EHO74818.1| chaperone ClpB [Prevotella micans F0438]
          Length = 862

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/298 (41%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R+VGQ  AI+ ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEDELHKRVVGQNEAIDAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDET-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q   ++  +     
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFAEMTDQN---- 734

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I+ ++ + +D              +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 735 -RNNVIADTKAAVMD--------------MLKKTI-RPEFLNRIDETIMFLPLTKKQIGG 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K+ L+     + W D  V+ + + GYD  +GAR +K  ++R V++ L+
Sbjct: 779 IVRLQLE-RVKEMLEPQGFGLQWTDPAVDYLSSVGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|428299923|ref|YP_007138229.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
 gi|428236467|gb|AFZ02257.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
          Length = 889

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 208/340 (61%), Gaps = 32/340 (9%)

Query: 220 NSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINI 279
            S ++  +   +A+I +I+ K+      + R  E+E ++   LE  L  R++GQ+ A+  
Sbjct: 531 TSANLLREQVTEADIAEIVAKWT--GIPVNRLLESERQKLLQLESHLHQRVIGQQEALEA 588

Query: 280 ISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQ 338
           +SAAI+R   G  D + P+  F+F+G +G+GKTELA+ LA ++  D ++A IRLDMSEY 
Sbjct: 589 VSAAIRRARAGMKDPNRPIGSFMFMGPTGVGKTELARALAQFLF-DAEDALIRLDMSEYM 647

Query: 339 EKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGR 398
           EKH V++L+GAPPGY+G+++GGQL++ +++ P +VVL DEV+KAHPDV  +LLQ+ D+GR
Sbjct: 648 EKHSVSRLVGAPPGYVGYEEGGQLSETVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGR 707

Query: 399 LTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTI 458
           +TD +G+T++ ++ + VMTSN+ S    +H L +  +  ++ K    +  +         
Sbjct: 708 ITDSQGRTVDFQNTVIVMTSNIGS----EHILDVSSDESQYEKMRTRVMDA--------- 754

Query: 459 SRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHN 518
                       L+ HF R EFL R+++++ F P ++SE+  +V  +L    +K L +  
Sbjct: 755 ------------LRSHF-RPEFLNRVDDLIIFHPLNRSEMGEIVKIQLK-RVEKLLGEQK 800

Query: 519 INI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           IN+ +     + ++  GYD  YGAR IK  ++RQV + +A
Sbjct: 801 INLEISPAACDHLVEVGYDPVYGARPIKRAIQRQVENAIA 840


>gi|373459155|ref|ZP_09550922.1| ATP-dependent chaperone ClpB [Caldithrix abyssi DSM 13497]
 gi|371720819|gb|EHO42590.1| ATP-dependent chaperone ClpB [Caldithrix abyssi DSM 13497]
          Length = 872

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/313 (39%), Positives = 204/313 (65%), Gaps = 26/313 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           +QR  E+E+ +   +E RL+ R+VGQE AI  ++ A++R   G  D + P+  F+FLGS+
Sbjct: 551 VQRMLESEKEKLLKMEDRLRKRVVGQEEAIRAVADAVRRSRAGLADQNRPIGSFIFLGST 610

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA ++  D + A IR+DMSEY E+H V++LIG+PPGY+G+++GGQLT+++
Sbjct: 611 GVGKTELAKALAEFLF-DDENAMIRIDMSEYMERHSVSRLIGSPPGYVGYEEGGQLTEQV 669

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVL DE++KAHP+V  +LLQ+ ++GRLTD KG+T++ K+ I +MTSNL +  I 
Sbjct: 670 RRKPYSVVLLDEIEKAHPEVFNILLQVLEDGRLTDNKGRTVDFKNTIIIMTSNLGAGYIR 729

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           + +  + +E                  L+ T     + +V++  LK+   R EFL RI++
Sbjct: 730 EKSENITQE-----------------KLEETYE-EIRKNVIE-FLKQSL-RPEFLNRIDD 769

Query: 487 IVYFLPFSKSELHTLVCRELNF-WAKKALDKHNINIVWDID-VETILADGYDVHYGARSI 544
           I+ F P +K ++  +V   L F   KK L++ +++   D   VE ++  GYD  +GAR +
Sbjct: 770 IIVFRPLNKEDMKQIV--RLQFERIKKMLEQQDLSAELDESAVEYLVNKGYDPAFGARPL 827

Query: 545 KHEVERQVVSQLA 557
           K  +++++V++LA
Sbjct: 828 KRLMQKELVNELA 840


>gi|120553812|ref|YP_958163.1| ATPase [Marinobacter aquaeolei VT8]
 gi|120323661|gb|ABM17976.1| ATPase AAA-2 domain protein [Marinobacter aquaeolei VT8]
          Length = 859

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 199/331 (60%), Gaps = 31/331 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ L DR++GQ+ A+  +S A++R   G +D + P   FLFLG +G+GKT
Sbjct: 553 EGERDKLMRMEEALHDRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKALANFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S     H +Q
Sbjct: 672 SVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGS-----HIIQ 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             K GEE  +   S                     V  ++  HF R EF+ R++E+V F 
Sbjct: 727 -EKAGEENYEDMKS--------------------AVMEVVGSHF-RPEFINRVDEVVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++S++  +   ++   A++ L   ++ +    DV  +LA+ GYD  YGAR +K  ++R
Sbjct: 765 PLAESQIQGIARIQIENLARR-LKDQDMKLELGDDVMQLLAEVGYDPVYGARPLKRAIQR 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
            + + LA    +     G  +R  VQ  + V
Sbjct: 824 MIENPLAQKLLQGAFVPGDIIRATVQEDRLV 854


>gi|146343231|ref|YP_001208279.1| chaperone [Bradyrhizobium sp. ORS 278]
 gi|146196037|emb|CAL80064.1| Chaperone [Bradyrhizobium sp. ORS 278]
          Length = 879

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/348 (38%), Positives = 202/348 (58%), Gaps = 35/348 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD   K+ SG +  +     +I Q++ ++     D  +  E E+ +   +E  L  R+VG
Sbjct: 516 ADIEAKETSGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLRMEDSLGKRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A++ ++ A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+  A +R
Sbjct: 574 QFEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S+          
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSEVR-------- 739

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA- 510
                         +V   ++ HF R EFL R++EI+ F    KSE+  +V  E+ F   
Sbjct: 740 -------------ELVMGTVRGHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EIQFSRL 783

Query: 511 KKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVERQVVSQLA 557
           +K L++  I +  D D    L A G+D  YGAR +K  ++R V   LA
Sbjct: 784 QKLLEERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLA 831


>gi|423434767|ref|ZP_17411748.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
 gi|401126062|gb|EJQ33817.1| chaperone ClpB [Bacillus cereus BAG4X12-1]
          Length = 866

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+ ++V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKSIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|389696003|ref|ZP_10183645.1| ATP-dependent chaperone ClpB [Microvirga sp. WSM3557]
 gi|388584809|gb|EIM25104.1| ATP-dependent chaperone ClpB [Microvirga sp. WSM3557]
          Length = 873

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 211/367 (57%), Gaps = 40/367 (10%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREK 252
           L YGV+ G       L K  ++   + + G +  +     ++ Q++ ++     D   E 
Sbjct: 502 LSYGVIPG-------LEKQLSEVEARADGGGLMEEAVTPDHVAQVVSRWTGVPVDKMLEG 554

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +EQ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 555 ERE--KLLHMEQDLAKRVVGQAEAVTAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D + A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELTKALASFLF-DDETALVRIDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL +  +      
Sbjct: 672 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYL------ 725

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         +++ +G + D       +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 726 --------------VNQPEGQDTDA-----VRDEVMS-VVRSHF-RPEFLNRVDEIILFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              +SE+  +V  ++    +K L+   I +  D +    LAD GYD  YGAR +K  +++
Sbjct: 765 RLKRSEMGAIVDIQMRRL-QKLLEDRKITLQLDEEARNWLADKGYDPAYGARPLKRVIQK 823

Query: 551 QVVSQLA 557
            V   LA
Sbjct: 824 NVQDPLA 830


>gi|325280827|ref|YP_004253369.1| ATP-dependent chaperone ClpB [Odoribacter splanchnicus DSM 20712]
 gi|324312636|gb|ADY33189.1| ATP-dependent chaperone ClpB [Odoribacter splanchnicus DSM 20712]
          Length = 863

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 222/370 (60%), Gaps = 29/370 (7%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            + L YG +    + +E++ K  AD  +K     I  +   D +I  ++ K+      + 
Sbjct: 493 VAELRYGKIKEAEQRIEVVKKKLAD--MKHGESLIREEVTSD-DIAAVVSKWT--GIPVN 547

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  ++E  +   LE+ L  R+VGQE AI  ++ A++R   G  D   P+  F+FLG++G+
Sbjct: 548 RMMQSERTKLLHLEEELHKRVVGQEVAIAALADAVRRNRAGLQDARRPIGSFIFLGTTGV 607

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAK LA ++  D+ +   R+DMSEYQEKH V++LIGAPPGY+G+D+GGQLT+ +++
Sbjct: 608 GKTELAKALAEFLFDDETQ-MTRIDMSEYQEKHSVSRLIGAPPGYIGYDEGGQLTEAVRR 666

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+T++ K+ I +MTSN+ ++ I + 
Sbjct: 667 KPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNTIVIMTSNIGAHIIQER 726

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
              L +             K++   L+ T      ++ V  +LK+   R EFL RI+E++
Sbjct: 727 LKDLNE-------------KNRDQVLETT------NNEVYELLKQTI-RPEFLNRIDEVI 766

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHE 547
            F P  K+E+  +V  ++    +K L  ++I I V D  VE I  +GYD  +GAR +K  
Sbjct: 767 MFTPLQKNEIVDIVRLQVKSL-QKMLANNSITIEVTDKAVEWIAQEGYDPQFGARPVKRV 825

Query: 548 VERQVVSQLA 557
           ++R +++ L+
Sbjct: 826 IQRNLLNDLS 835


>gi|206967764|ref|ZP_03228720.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus AH1134]
 gi|365161970|ref|ZP_09358106.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
 gi|423415025|ref|ZP_17392145.1| chaperone ClpB [Bacillus cereus BAG3O-2]
 gi|423429192|ref|ZP_17406196.1| chaperone ClpB [Bacillus cereus BAG4O-1]
 gi|206736684|gb|EDZ53831.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus AH1134]
 gi|363619629|gb|EHL70943.1| chaperone ClpB [Bacillus sp. 7_6_55CFAA_CT2]
 gi|401097083|gb|EJQ05113.1| chaperone ClpB [Bacillus cereus BAG3O-2]
 gi|401123170|gb|EJQ30953.1| chaperone ClpB [Bacillus cereus BAG4O-1]
          Length = 866

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+ ++V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKSIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|148252760|ref|YP_001237345.1| chaperone [Bradyrhizobium sp. BTAi1]
 gi|146404933|gb|ABQ33439.1| Chaperone [Bradyrhizobium sp. BTAi1]
          Length = 879

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/348 (38%), Positives = 202/348 (58%), Gaps = 35/348 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD   K+N+G +  +     +I Q++ ++     D  +  E E+ +   +E  L  R+VG
Sbjct: 516 ADIEAKENAGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLRMEDSLGKRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A++ ++ A++R   G  D   P+  F+FLG +G+GKTEL K LA Y+  D+  A +R
Sbjct: 574 QFEAVHAVATAVRRSRAGLQDPHRPMGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S+          
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSEVR-------- 739

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA- 510
                         +V   ++ HF R EFL R++EI+ F    KSE+  +V  E+ F   
Sbjct: 740 -------------ELVMGTVRSHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EIQFSRL 783

Query: 511 KKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVERQVVSQLA 557
           +K L++  I +  D D    L A G+D  YGAR +K  ++R V   LA
Sbjct: 784 QKLLEERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLA 831


>gi|384917654|ref|ZP_10017769.1| ATPase [Citreicella sp. 357]
 gi|384468463|gb|EIE52893.1| ATPase [Citreicella sp. 357]
          Length = 952

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/329 (40%), Positives = 207/329 (62%), Gaps = 31/329 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           +EER K   LE RL +R++GQ+ AI  ++ A++    G  +   P   FLFLG +G+GKT
Sbjct: 591 SEEREKLLKLEDRLHERVIGQDEAIASVADAVRLARAGLREGSAPTATFLFLGPTGVGKT 650

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  ++ D+ +A IR+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 651 ELAKALAETVYGDE-DAMIRIDMSEYGERHAVARLVGAPPGYVGYDEGGQLTERVRRRPY 709

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I ++   
Sbjct: 710 SVVLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRN--- 766

Query: 432 LRKEG-EEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
           L+K G +EF +     SK +G  ++V              L+RHF R EF+ RI+EI+ F
Sbjct: 767 LKKRGTKEFDE-----SKQRGELMEV--------------LRRHF-RPEFINRIDEIIVF 806

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVE 549
              +++E+  +V  +L+  A+ AL    + +V+D  V +   A G+   +GAR ++  + 
Sbjct: 807 HSLNRAEIREIVGLQLDRVARTAL-TQGVELVFDESVTDHFAAIGFQPEFGARELRRLIR 865

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
            ++ ++LA A     +  G  V+  V WS
Sbjct: 866 SELETELARAMLAGAVEDGDTVQ--VAWS 892


>gi|387813183|ref|YP_005428664.1| ATP-dependent protease [Marinobacter hydrocarbonoclasticus ATCC
           49840]
 gi|381338194|emb|CCG94241.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
          Length = 859

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 199/331 (60%), Gaps = 31/331 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ L DR++GQ+ A+  +S A++R   G +D + P   FLFLG +G+GKT
Sbjct: 553 EGERDKLMRMEEALHDRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKALANFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S     H +Q
Sbjct: 672 SVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGS-----HIIQ 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             K GEE  +   S                     V  ++  HF R EF+ R++E+V F 
Sbjct: 727 -EKAGEENYEDMKS--------------------AVMEVVGTHF-RPEFINRVDEVVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++S++  +   ++   A++ L   ++ +    DV  +LA+ GYD  YGAR +K  ++R
Sbjct: 765 PLAESQIQGIARIQIENLARR-LKDQDMKLELGDDVMQLLAEVGYDPVYGARPLKRAIQR 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
            + + LA    +     G  +R  VQ  + V
Sbjct: 824 MIENPLAQKLLQGAFVPGDIIRATVQEDRLV 854


>gi|338812538|ref|ZP_08624710.1| ATP-dependent chaperone ClpB [Acetonema longum DSM 6540]
 gi|337275468|gb|EGO63933.1| ATP-dependent chaperone ClpB [Acetonema longum DSM 6540]
          Length = 866

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 128/322 (39%), Positives = 197/322 (61%), Gaps = 35/322 (10%)

Query: 256 ERRKYP-LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           ER K   LE+ L  R+VGQ++A+  ++ AI R   G  D   P+  F+FLG +G+GKTEL
Sbjct: 559 EREKLSRLEEILHQRVVGQDAAVTAVTEAIIRARAGIKDPQRPIGSFIFLGPTGVGKTEL 618

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           AK L+  +  D++ + IR+DMSEY EKH V++L+GAPPGY+G+D+GGQLT+ +++ P +V
Sbjct: 619 AKALSEVLFDDER-SMIRIDMSEYMEKHTVSRLVGAPPGYIGYDEGGQLTEAVRRRPYSV 677

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           +L DEV+KAH DV  +LLQ+ D+GRLTDGKG+T++ K+ + +MTSN+ S EI        
Sbjct: 678 ILLDEVEKAHSDVFNILLQILDDGRLTDGKGRTVDFKNTVVIMTSNIGSQEIL------- 730

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
                              N D   +   K+ V++ ++KRHF R EFL RI++I+ F   
Sbjct: 731 -------------------NGDFAAA---KERVLE-MMKRHF-RPEFLNRIDDIIVFNAL 766

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVERQV 552
           ++ ++ ++    L    ++   + NI + WD D   +LA  GYD +YGAR ++  + R V
Sbjct: 767 NRDQVASIAGLLLQSLGERLKKQLNITLSWDSDTLNLLAKQGYDPNYGARPLRRLIGRLV 826

Query: 553 VSQLAAAHEKSVIGKGSFVRLY 574
            ++L+    K  I +GS V L+
Sbjct: 827 ETELSKKIVKGEIPEGSHVALH 848


>gi|154245846|ref|YP_001416804.1| ATPase [Xanthobacter autotrophicus Py2]
 gi|154159931|gb|ABS67147.1| ATPase AAA-2 domain protein [Xanthobacter autotrophicus Py2]
          Length = 879

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 184/307 (59%), Gaps = 18/307 (5%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L  R+VGQ  A+  +S A++R   G  D + P+  FLFLG +G+GKT
Sbjct: 553 EGEREKLLRMELELAKRVVGQSEAVAAVSTAVRRARAGLQDPNRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D + A +R+DMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 613 ELTKALAEFLF-DDETAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + VMTSNL +  +A     
Sbjct: 672 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVLIVMTSNLGAEFLA----- 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                     R P   K  G   +  +S      +V   ++RHF R EF+ RI+EIV F 
Sbjct: 727 --------DPRQPMGFKVPGHEGETVVSDEEAYDMVMGAVRRHF-RPEFINRIDEIVMFH 777

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              + ++ ++V  ++    +K L+   I I    +    LA+ GYD  YGAR +K  +++
Sbjct: 778 RLKREQMDSIVDIQMGRL-RKLLEDRKITIELSPEARAFLAEKGYDPAYGARPLKRTIQK 836

Query: 551 QVVSQLA 557
            V   LA
Sbjct: 837 LVQDPLA 843


>gi|423530858|ref|ZP_17507303.1| chaperone ClpB [Bacillus cereus HuB1-1]
 gi|402445422|gb|EJV77292.1| chaperone ClpB [Bacillus cereus HuB1-1]
          Length = 866

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKAIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|167379615|ref|XP_001735209.1| heat shock protein [Entamoeba dispar SAW760]
 gi|165902897|gb|EDR28604.1| heat shock protein, putative [Entamoeba dispar SAW760]
          Length = 575

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 126/316 (39%), Positives = 196/316 (62%), Gaps = 33/316 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E+ R   LE+ L  R++GQ  A+  +S AI R   G  ++  P   F+FLG SG+GKT
Sbjct: 264 QTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKT 323

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D ++  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 324 ELAKALAVELF-DDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPY 382

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ I +MTSNL S EI    ++
Sbjct: 383 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGS-EIIMKGVE 441

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             +EG+                    +SR  K+ V++ I+K+ F + EFL R+++I+ F 
Sbjct: 442 --REGQ--------------------VSRKVKETVME-IVKKTF-KPEFLNRLDDIIVFS 477

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID--VETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++ ++ V   +  +E I+  GY + YGAR ++  +E
Sbjct: 478 PLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIE 537

Query: 550 RQVVSQLAAAHEKSVI 565
           + VV+ +     KS+I
Sbjct: 538 KTVVTSIT----KSII 549


>gi|406040493|ref|ZP_11047848.1| putative ATPase with chaperone activity, clpB [Acinetobacter
           ursingii DSM 16037 = CIP 107286]
          Length = 949

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 200/327 (61%), Gaps = 31/327 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGGKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           VVL DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +KS+                V  +L+ HF R EF+ RI+EI+ F 
Sbjct: 777 RSAAGEEYEK-----TKSE----------------VMDVLRGHF-RPEFINRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D  +    A +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLTDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQW 577
           ++ + LA       IGKG      V+W
Sbjct: 874 ELETALAREMLGGGIGKGDHA--SVRW 898


>gi|300774344|ref|ZP_07084208.1| chaperone protein ClpB [Chryseobacterium gleum ATCC 35910]
 gi|300506988|gb|EFK38122.1| chaperone protein ClpB [Chryseobacterium gleum ATCC 35910]
          Length = 864

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 128/298 (42%), Positives = 190/298 (63%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R+VGQ+ AI  ++ AI+R   G +DD  P+  FLFLG++G+GKTELAK LA +
Sbjct: 558 LETELHHRVVGQDEAIQAVADAIRRNRAGLSDDKKPIGSFLFLGTTGVGKTELAKALAEF 617

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++
Sbjct: 618 LFDDENN-MTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVVLLDEIE 676

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV   LLQ+ D+GRLTD KG+ +  K++I +MTSNL S     H +Q     E F 
Sbjct: 677 KAHPDVFNTLLQVLDDGRLTDNKGRVVNFKNSIIIMTSNLGS-----HLIQ-----ENFE 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
             T    ++Q   +D T    F       +LK+   R EFL RI+EIV F P  K E+  
Sbjct: 727 NLT---EENQDEIVDKTKEEVFD------LLKQTL-RPEFLNRIDEIVLFQPLRKKEIGK 776

Query: 501 LVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L  +  + L K NI + +  D V+ ++  GYD  +GAR +K  ++++V+++L+
Sbjct: 777 IVQYQLRGF-NEMLSKRNIIMTFTQDAVDYLMDKGYDPAFGARPLKRVIQQEVLNKLS 833


>gi|167386832|ref|XP_001733400.1| heat shock protein [Entamoeba dispar SAW760]
 gi|165899086|gb|EDR25773.1| heat shock protein, putative [Entamoeba dispar SAW760]
          Length = 840

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 125/316 (39%), Positives = 194/316 (61%), Gaps = 33/316 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E+ R   LE+ L  R++GQ  A+  +S AI R   G  ++  P   F+FLG SG+GKT
Sbjct: 529 QTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKT 588

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D ++  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 589 ELAKALAVELF-DDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPY 647

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ I +MTSNL S  I +    
Sbjct: 648 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIMKG--- 704

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           + +EG+                    +SR  K+ V++ I+K+ F + EFL R+++I  F 
Sbjct: 705 VEREGQ--------------------VSRKVKETVME-IVKKTF-KPEFLNRLDDITVFS 742

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++ ++ V   +  +E I+  GY + YGAR ++  +E
Sbjct: 743 PLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIE 802

Query: 550 RQVVSQLAAAHEKSVI 565
           + VV+ +     KS+I
Sbjct: 803 KTVVTSIT----KSII 814


>gi|443477588|ref|ZP_21067424.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
 gi|443017260|gb|ELS31741.1| ATP-dependent chaperone ClpB [Pseudanabaena biceps PCC 7429]
          Length = 891

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 122/331 (36%), Positives = 200/331 (60%), Gaps = 25/331 (7%)

Query: 254 AEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           +E ++   LE+ L +R++GQE A+  +++AI+R   G  D + PL  FLFLG +G+GKTE
Sbjct: 581 SERQKLLMLEKHLHERVIGQEEAVTSVASAIRRARAGMNDPNRPLGSFLFLGPTGVGKTE 640

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LA+ LA ++  D   + +R+DMSEY EKH V++LIGAPPGY+G+++GGQ ++ +++ P +
Sbjct: 641 LARALAEFLF-DSDASMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQFSEAVRRHPYS 699

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           VVLFDEV+KAHPDV  +LLQ+ D+GR+TD +G+ ++CK+ + +MTSN+ S+ I +     
Sbjct: 700 VVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRLVDCKNTVIIMTSNIGSDRILE----- 754

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRH--FKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                         SK    ++D   SR+   +D V+  +L+ HF R EFL RI+E V F
Sbjct: 755 -------------TSKDLAEDIDAD-SRYDEMRDRVID-VLRNHF-RPEFLNRIDETVIF 798

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
               +SE+  +   ++     +  D+     + +   + I A GYD  YGAR +K  ++R
Sbjct: 799 HALRRSEIRAIATLQIKRIESRLSDRKISLKLSEEAKDYIAAVGYDPSYGARPLKRAIQR 858

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           ++ + +A    +    +G  + + V+  K V
Sbjct: 859 EIENPIATKIIEGTFSEGQTISITVEEDKLV 889


>gi|170751814|ref|YP_001758074.1| ATP-dependent chaperone ClpB [Methylobacterium radiotolerans JCM
           2831]
 gi|170658336|gb|ACB27391.1| ATP-dependent chaperone ClpB [Methylobacterium radiotolerans JCM
           2831]
          Length = 874

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 187/307 (60%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 555 EGEREKLLAMEEALSKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 615 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL           
Sbjct: 674 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNL----------- 722

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G E+    P+     G + D       +D V+  +++ HF R EFL R++EI+ F 
Sbjct: 723 ----GAEYLVNQPA-----GQDTDA-----VRDEVMG-VVRGHF-RPEFLNRVDEIILFH 766

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L    +K LD   I +  D D +  LAD GYD  YGAR +K  +++
Sbjct: 767 RLARSEMGAIVEIQLGRL-QKLLDDRKIALDVDEDAKNWLADKGYDPAYGARPLKRVIQK 825

Query: 551 QVVSQLA 557
            V   LA
Sbjct: 826 NVQDPLA 832


>gi|228996347|ref|ZP_04155990.1| Chaperone protein clpB 1 [Bacillus mycoides Rock3-17]
 gi|229004011|ref|ZP_04161815.1| Chaperone protein clpB 1 [Bacillus mycoides Rock1-4]
 gi|228757225|gb|EEM06466.1| Chaperone protein clpB 1 [Bacillus mycoides Rock1-4]
 gi|228763386|gb|EEM12290.1| Chaperone protein clpB 1 [Bacillus mycoides Rock3-17]
          Length = 866

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 192/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A+++++ A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQIIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSG----HLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D TI    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLQEDGTIKEEARN-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     + +D+H    + ++  E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLIDRHITVELTEVAKEFVVESGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|444909617|ref|ZP_21229807.1| ClpB protein [Cystobacter fuscus DSM 2262]
 gi|444719989|gb|ELW60776.1| ClpB protein [Cystobacter fuscus DSM 2262]
          Length = 867

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 200/328 (60%), Gaps = 33/328 (10%)

Query: 233 NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWT 292
           +I Q++ K+   +  + +  E E ++   +E RL  R++GQ SAI  +S A++R  +G  
Sbjct: 537 DIAQVVAKWT--HIPVSKLLEGEVQKLVHMEDRLAKRVIGQRSAIEAVSNAVRRARSGLQ 594

Query: 293 DDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
           D + P+  F+FLG +G+GKTE AK LA ++  D   A +R+DMSEY EKH VA+L+GAPP
Sbjct: 595 DPNRPIGSFIFLGPTGVGKTETAKALAEFLF-DDDTAMVRIDMSEYMEKHSVARLVGAPP 653

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+G+D+GGQLT+ +++ P  V+LFDE++KAHPDV  +LLQL DEGRLTD +G+T++ K+
Sbjct: 654 GYVGYDEGGQLTEAVRRRPYTVILFDEIEKAHPDVFNILLQLLDEGRLTDSQGRTVDFKN 713

Query: 412 AIFVMTSNLASNEIAQHALQLRKEG-EEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPI 470
            + +MTSN+ S      ALQ    G +E  +RT                   ++ V+  I
Sbjct: 714 TVLIMTSNIGS-----QALQEGMAGKDELDERT-------------------REDVLG-I 748

Query: 471 LKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI 530
           L++HF R EFL R++EI+ F P  K ++  +V  ++    K   DK  + +        +
Sbjct: 749 LRQHF-RPEFLNRVDEIILFEPLRKRDIQRIVDIQVGRLQKLLADKR-LTLSLSEKAAAV 806

Query: 531 LAD-GYDVHYGARSIKHEVERQVVSQLA 557
           LA+ GYD  YGAR +K  +++ ++  LA
Sbjct: 807 LAERGYDPVYGARPLKRAIQKHLMDPLA 834


>gi|384109230|ref|ZP_10010111.1| ATP-dependent chaperone ClpB [Treponema sp. JC4]
 gi|383869188|gb|EID84806.1| ATP-dependent chaperone ClpB [Treponema sp. JC4]
          Length = 862

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/305 (42%), Positives = 186/305 (60%), Gaps = 32/305 (10%)

Query: 256 ERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           E++KY  LE  L  R++GQ  A+ ++S AI+R  +G  D + PL  F+F+G +G+GKTEL
Sbjct: 559 EKQKYLELENVLHKRVIGQNEAVQVVSDAIRRNRSGLNDPNRPLGSFMFIGPTGVGKTEL 618

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           AK LA ++  D+K A  R+DMSEY EK  V +LIGAPPGY+G+D+GGQLT+ +++ P +V
Sbjct: 619 AKTLADFLFNDEK-ALTRIDMSEYMEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRRPYSV 677

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           +LFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+ ++ K+ I +MTSNL S+ I +   Q  
Sbjct: 678 ILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRVVDFKNTIIIMTSNLGSDLILEADSQ-- 735

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
              E+ +   PSI        D+ + + F              R EFL RI+EIV F   
Sbjct: 736 ---EKLNALRPSI--------DILLKKTF--------------RPEFLNRIDEIVMFGQL 770

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQV 552
            K  +  +V  +L   A +  D+  I + +D      LA+ GYD   GAR +K  ++  V
Sbjct: 771 GKEHITGIVRNQLERVAARLADRR-ITLSFDDSAVNFLAEKGYDPSMGARPVKRAIQTYV 829

Query: 553 VSQLA 557
            +QLA
Sbjct: 830 ENQLA 834


>gi|291543530|emb|CBL16639.1| ATP-dependent chaperone ClpB [Ruminococcus champanellensis 18P13]
          Length = 868

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 125/308 (40%), Positives = 189/308 (61%), Gaps = 27/308 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E ++   +E  L  R++GQ+ A+  +S AI R   G  D D P+  FLFLG +G+GKT
Sbjct: 559 EGERQKLLGMESILHQRVIGQDEAVEKVSEAILRSRAGIQDPDRPIGSFLFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D++   +R+DMSEY EK+ V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ELAKALAEALFDDERN-IVRIDMSEYMEKYSVSRLIGAPPGYVGYDEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GR+TD +G+T++ K+ I ++TSNL S+ I      
Sbjct: 678 SVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTIIILTSNLGSDAIL----- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D  IS   ++  V+ +LKR F R EFL R++EIV++ 
Sbjct: 733 ------------------NGITADNQISPEAREQ-VEALLKRQF-RPEFLNRLDEIVFYK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +K+E+  +V   L    K+  DK     V D   + I+  GYD  YGAR +K  ++++
Sbjct: 773 PLAKAEIGAIVDLMLKDLEKRLADKQITLRVTDKAKDHIIECGYDPLYGARPLKRYIQQK 832

Query: 552 VVSQLAAA 559
           + + +A A
Sbjct: 833 LETLIARA 840


>gi|384568034|ref|ZP_10015138.1| ATP-dependent chaperone ClpB [Saccharomonospora glauca K62]
 gi|384523888|gb|EIF01084.1| ATP-dependent chaperone ClpB [Saccharomonospora glauca K62]
          Length = 868

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/322 (40%), Positives = 191/322 (59%), Gaps = 31/322 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+ ++S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 559 EGESGKLLRMEEELTRRVVGQPDAVRVVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 619 ELAKALAEFLFDDER-AILRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA     
Sbjct: 678 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIAD---- 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                       P++S+SQ            KD V+  ++++HF + EFL R+++IV F 
Sbjct: 734 ------------PTLSESQ-----------RKDSVMA-VVQQHF-KPEFLNRLDDIVVFG 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
                +L  +V  ++   AK+   +     V     E +  +GYD  YGAR ++  V+  
Sbjct: 769 ALDTEQLGAIVDIQVERLAKRLSQRRLTLEVTPAAREWLAINGYDPIYGARPLRRLVQSA 828

Query: 552 VVSQLAAAHEKSVIGKGSFVRL 573
           +  QLA       I  G  VR+
Sbjct: 829 IGDQLAKKLLAGEIHDGDRVRV 850


>gi|407455459|ref|YP_006734350.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci GR9]
 gi|405782002|gb|AFS20751.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci GR9]
          Length = 864

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 201/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADREVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A + +   K+G E SK      
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYCV---KKGSEVSK------ 738

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  D  +S      VV P L+++F   EF+ RI++I+ F+P S  ++  +V  ++ 
Sbjct: 739 -------DTVLS------VVAPTLRKYF-SPEFINRIDDILPFIPLSTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRMLERR-VTLTWDDSVILYLSEQGYDSAFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  SK+V
Sbjct: 844 PDTSIELTM--SKDV 856


>gi|209883928|ref|YP_002287785.1| ATP-dependent chaperone ClpB [Oligotropha carboxidovorans OM5]
 gi|337742364|ref|YP_004634092.1| chaperone protein ClpB [Oligotropha carboxidovorans OM5]
 gi|386031329|ref|YP_005952104.1| chaperone protein ClpB [Oligotropha carboxidovorans OM4]
 gi|209872124|gb|ACI91920.1| ATP-dependent chaperone ClpB [Oligotropha carboxidovorans OM5]
 gi|336096395|gb|AEI04221.1| chaperone protein ClpB [Oligotropha carboxidovorans OM4]
 gi|336100028|gb|AEI07851.1| chaperone protein ClpB [Oligotropha carboxidovorans OM5]
          Length = 877

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 129/327 (39%), Positives = 198/327 (60%), Gaps = 33/327 (10%)

Query: 233 NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWT 292
           NI Q++ ++     D  +  E E+ +   +E+ L  R++GQ  A+  +S A++R   G  
Sbjct: 535 NIAQVVSRWTGVPVD--KMLEGEKDKLLRMEEMLGQRVIGQAQAVRAVSTAVRRARAGLQ 592

Query: 293 DDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
           D + P+  F+FLG +G+GKTEL K LA Y+  D + A +R+DMSEY EKH VA+LIGAPP
Sbjct: 593 DPNRPIGSFMFLGPTGVGKTELTKALAEYLF-DDETALVRMDMSEYMEKHSVARLIGAPP 651

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++
Sbjct: 652 GYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN 711

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPIL 471
            + +MTSN+               G EF      +++ +G +     +   +D V+  ++
Sbjct: 712 TLIIMTSNI---------------GAEF-----LVNQPEGED-----TGAVRDQVMG-MV 745

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           + HF R EFL RI+EI+ F    KSE+  +V  +LN   +K L+   I +  D      L
Sbjct: 746 RTHF-RPEFLNRIDEIILFHRLQKSEMGRIVDIQLNRL-RKLLEDRKIELHLDAKARDWL 803

Query: 532 AD-GYDVHYGARSIKHEVERQVVSQLA 557
           A+ G+D  YGAR +K  ++R V   LA
Sbjct: 804 AEKGWDPAYGARPLKRVIQRSVQDSLA 830


>gi|256380924|ref|YP_003104584.1| ATP-dependent chaperone ClpB [Actinosynnema mirum DSM 43827]
 gi|255925227|gb|ACU40738.1| ATP-dependent chaperone ClpB [Actinosynnema mirum DSM 43827]
          Length = 860

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 189/324 (58%), Gaps = 31/324 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L  R+VGQ  A+ ++S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 555 EGETTKLLRMEDELTGRVVGQAEAVRVVSDAVRRTRAGVADPDRPTGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A IR+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 615 ELAKALAQFLFDDER-AMIRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S+ IA     
Sbjct: 674 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSHAIA----- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                  DV++    ++  V  +++ HF + EFL R++++V F 
Sbjct: 729 -----------------------DVSLDERGREDAVMQVVRGHF-KPEFLNRLDDVVVFR 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             +  EL ++V  ++   A +   +  +  V     E +  +G+D  YGAR ++  V+  
Sbjct: 765 SLATEELTSIVDIQVAKLAARLAQRRLVLEVTPAAREWLALNGFDPVYGARPLRRLVQSS 824

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYV 575
           +  QLA       +  G  VR+ V
Sbjct: 825 IGDQLARELLSGEVRDGDAVRVDV 848


>gi|170743190|ref|YP_001771845.1| ATP-dependent chaperone ClpB [Methylobacterium sp. 4-46]
 gi|168197464|gb|ACA19411.1| ATP-dependent chaperone ClpB [Methylobacterium sp. 4-46]
          Length = 878

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 134/385 (34%), Positives = 217/385 (56%), Gaps = 38/385 (9%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREK 252
           L YG++ G    +  +   G D +  + SG     + E+A     +     ++  +  +K
Sbjct: 502 LAYGIIPGLERELGDIEARGPDGSRGNGSG-----FMEEAVTPNHVAGVVSRWTGVPVDK 556

Query: 253 --EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  +   +E+ L  R+VGQ  A+  ++ A++R   G  D + P+  F+FLG +G+G
Sbjct: 557 MLEGEREKLLAMEEALGRRVVGQREAVEAVATAVRRARAGLQDPNRPIGSFMFLGPTGVG 616

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL K LA ++  D + A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ 
Sbjct: 617 KTELTKALASFLF-DDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRR 675

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + VMTSNL +  +    
Sbjct: 676 PYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLVMTSNLGAEYL---- 731

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
                           +++ +G + D       +D V+  +++ HF R EFL R++EI+ 
Sbjct: 732 ----------------VNQPEGQDTDA-----VRDEVMA-VVRAHF-RPEFLNRVDEIIL 768

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F    ++E+  +V  +L    +K LD+  I +  + D    LA+ GYD  YGAR +K  +
Sbjct: 769 FHRLKRAEMGAIVDIQLGRL-QKLLDERKITLDVEPDARAWLAERGYDPAYGARPLKRVI 827

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL 573
           ++ V   +A       +  G  VR+
Sbjct: 828 QKSVQDPMAEQILAGSVHDGEAVRV 852


>gi|126663793|ref|ZP_01734788.1| putative heat shock ClpB protein [Flavobacteria bacterium BAL38]
 gi|126624057|gb|EAZ94750.1| putative heat shock ClpB protein [Flavobacteria bacterium BAL38]
          Length = 867

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 190/310 (61%), Gaps = 31/310 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE  L  R+VGQE AI  +S A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLKLEDELHHRVVGQEEAIEAVSDAVRRSRAGLQDMKKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D+K A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLFDDEK-AMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S  I      
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGSAIIQ----- 724

Query: 432 LRKEGEEFSKRTPSI-SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                E+F     S+ + ++ + ++V             +LK+   R EF+ RI+EIV F
Sbjct: 725 -----EKFENLKGSVEAATEAAKIEVL-----------GVLKQTV-RPEFINRIDEIVMF 767

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI--LAD-GYDVHYGARSIKHE 547
            P +++ +  +V  +L    K  +  H  NI  D   E I  LA  GYD  YGAR +K  
Sbjct: 768 TPLTEANIKQIVSLQLKGVTK--MLAHQ-NITMDATQEAIDYLAQKGYDPQYGARPVKRV 824

Query: 548 VERQVVSQLA 557
           ++R+V++QL+
Sbjct: 825 IQREVLNQLS 834


>gi|407003686|gb|EKE20227.1| hypothetical protein ACD_8C00036G0001 [uncultured bacterium]
          Length = 871

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 203/333 (60%), Gaps = 21/333 (6%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E  +   +E  L+ R++GQ  AI  +S AI+R   G  +++ P+  F+FLG +G+GKT
Sbjct: 557 ESELEKLANMEDDLEKRVIGQGEAIKAVSNAIRRSRAGIAEENRPIGSFIFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D K + IRLDMSEY E H  AK+IG+PPGY+G+++GGQLT+ +++ P 
Sbjct: 617 ELAKTLAEFLFNDPK-SMIRLDMSEYMESHSTAKMIGSPPGYVGYEEGGQLTEIIRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  +LLQ+ D+GRLTD KG+ +  K+A+ VMTSN+ S+ I +    
Sbjct: 676 SVILFDEIEKAHPQVFNILLQILDDGRLTDAKGRVVSFKNAVIVMTSNVGSDIIYKM--- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                + F          QG  ++  ++ +     VQ  L+  F + EFL RI+E++ F 
Sbjct: 733 -----QSFG--------FQGEPMEENVNENDMRAKVQASLREQF-KPEFLNRIDEMIIFH 778

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P  K  L  +V  +LN   +K LD+ NI +    DV+  L + G+D  YGAR +K  ++ 
Sbjct: 779 PLGKKVLQKIVNLQLN-AVQKRLDEKNIKLRVSNDVKEYLTEKGFDPTYGARPLKRIIQN 837

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
           +++ +LA    +  I  G  +++ +Q +K V E
Sbjct: 838 EILDELALEIIEKKILDGDTIKVQLQKNKIVFE 870


>gi|116619644|ref|YP_821800.1| ATPase [Candidatus Solibacter usitatus Ellin6076]
 gi|116222806|gb|ABJ81515.1| ATPase AAA-2 domain protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 869

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 122/322 (37%), Positives = 195/322 (60%), Gaps = 26/322 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E ++   LE+ L  R++GQ+ A+  ++ A+ R  +G  D   P+  F+F+G +G+GKT
Sbjct: 550 EGEMQKLLHLEEELHKRVIGQDEAVTAVAEAVIRARSGLKDPQRPIGSFIFMGPTGVGKT 609

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA Y+  D + A IR+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 610 ELARALAEYMF-DDEHAMIRIDMSEYQEKHTVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 668

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAH DV  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSN+ S  I ++   
Sbjct: 669 SVILFDEIEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFKNTIVIMTSNVGSARILEY--- 725

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             QG+       R  K+ V++  ++R F R EFL R++EI+ F 
Sbjct: 726 ------------------QGAYSGAGFER-MKEAVLEE-MRRQF-RPEFLNRVDEIIVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             S+ +L  +V  +L     +  D+H    + D     ++  GYD HYGAR +K  ++++
Sbjct: 765 ALSEEDLKKIVEIQLGRLRARLADRHITLELTDAARANLVHTGYDPHYGARPLKRAIQKK 824

Query: 552 VVSQLAAAHEKSVIGKGSFVRL 573
           + + L     +  I  G  V++
Sbjct: 825 IETPLGRQLIQGAIRDGQVVKV 846


>gi|150007863|ref|YP_001302606.1| endopeptidase Clp ATP-binding subunit B [Parabacteroides distasonis
           ATCC 8503]
 gi|149936287|gb|ABR42984.1| endopeptidase Clp ATP-binding chain B [Parabacteroides distasonis
           ATCC 8503]
          Length = 862

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 127/309 (41%), Positives = 195/309 (63%), Gaps = 24/309 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AIN I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKDKLLRLESELHTRVIGQEEAINAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K TP+   +    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFEKMTPA---THDKVVDET-----KIQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ E+  +V  +L+   KK L  + + + +  +    +AD G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVSLQLS-SVKKMLATNGVALDFTNEAVDFIADKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLAAA 559
            V+++L+ A
Sbjct: 829 YVLNELSKA 837


>gi|449512492|ref|XP_002199578.2| PREDICTED: chaperone protein ClpB-like, partial [Taeniopygia
           guttata]
          Length = 479

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 123/307 (40%), Positives = 182/307 (59%), Gaps = 23/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R+VGQE AI  I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 166 QSEKEKLLHLEAELHQRVVGQEDAIRAIADAVRRSRAGLNDPRRPIGSFIFLGTTGVGKT 225

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEKH V++L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 226 ELAKALAEYLF-DDENMMTRIDMSEYQEKHSVSRLVGAPPGYVGYEEGGQLTESVRRKPY 284

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPD   +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S  I      
Sbjct: 285 QVVLFDEIEKAHPDTFNILLQVLDDGRLTDNKGRNVNFKNTIIIMTSNMGSQLIR----- 339

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E FSK TP             +    K+++          R EFL RI+EI+ F 
Sbjct: 340 -----ENFSKLTPQNKPKVVEETKAQVLEMLKENI----------RPEFLNRIDEIIMFT 384

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +++E+  +V  +L+   +       I +       + LAD GYD  +GAR +K  + R
Sbjct: 385 PLNRTEIEEIVGLQLHSIQRMLQKSSGIELKITPKALSYLADEGYDPEFGARPVKRAIHR 444

Query: 551 QVVSQLA 557
            V++QL+
Sbjct: 445 LVLNQLS 451


>gi|298372184|ref|ZP_06982174.1| chaperone protein ClpB [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275088|gb|EFI16639.1| chaperone protein ClpB [Bacteroidetes oral taxon 274 str. F0058]
          Length = 717

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 123/307 (40%), Positives = 192/307 (62%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E+ +   LE  L  R++GQ  AI+ I+ AI+R   G  D   P+  F+FLG++G+GKT
Sbjct: 406 QTEKEKLLNLEAELHKRVIGQSEAISAIANAIRRSRAGLQDTKRPIGSFIFLGTTGVGKT 465

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEKH  ++L+GAPPGY+G+D+GGQLT+ ++  P 
Sbjct: 466 ELAKALAEYLF-DNENLMTRIDMSEYQEKHSASRLVGAPPGYVGYDEGGQLTEAIRHKPY 524

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  VLLQ+ D+GRLTD KG+ +  K+ I +MTSNL S  I ++  +
Sbjct: 525 SVVLFDEIEKAHPDVFNVLLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSQLIRENFDK 584

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           + +     S R   I K+Q                V  +LK+   R EFL RI+E++ F 
Sbjct: 585 INE-----SNREEVIEKTQNE--------------VFELLKQTI-RPEFLNRIDELIMFT 624

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P ++ E+  +V  +++   ++ L  + I++ + D  ++ I A GYD  +GAR +K  ++R
Sbjct: 625 PLTEDEIRQVVVLQID-AVRRMLQHNGISMEITDNAIDLIAAKGYDPQFGARPVKRVIQR 683

Query: 551 QVVSQLA 557
            ++++L+
Sbjct: 684 LLLNELS 690


>gi|322434287|ref|YP_004216499.1| ATP-dependent chaperone ClpB [Granulicella tundricola MP5ACTX9]
 gi|321162014|gb|ADW67719.1| ATP-dependent chaperone ClpB [Granulicella tundricola MP5ACTX9]
          Length = 888

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 123/308 (39%), Positives = 189/308 (61%), Gaps = 31/308 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E ++   +E RL++R+VGQ+ A++ ++ AI+R   G +D   P+  F+FLG +G+GKT
Sbjct: 575 EGEVQKLVEMEARLRERVVGQDEALSAVANAIRRSRAGLSDPKRPIGSFIFLGPTGVGKT 634

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E A+ LA ++  D + A +R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 635 ETARALAEFLF-DDEAAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPY 693

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTD KG+T++ K+ + +MTSN+ + +++  A  
Sbjct: 694 GVVLFDEIEKAHPDVFNVLLQVLDDGRLTDSKGRTVDFKNTVLIMTSNIGAGQLST-AWA 752

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPI--LKRHFRRDEFLGRINEIVY 489
             +EG                         F+D  V+ I  LK+HF R EFL R+++IV 
Sbjct: 753 ENEEG-------------------------FEDAKVRVIDSLKQHF-RPEFLNRVDDIVV 786

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVE 549
           F P  + +L  ++   L    +   D+  +  + D     I   GYD  YGAR +K  ++
Sbjct: 787 FHPLGEEQLAHIIDLRLAELTQMLADRKIVIELTDEARAAIFKAGYDRAYGARPLKRAIQ 846

Query: 550 RQVVSQLA 557
           R V  +LA
Sbjct: 847 RMVQDKLA 854


>gi|167383993|ref|XP_001736770.1| heat shock protein [Entamoeba dispar SAW760]
 gi|165900729|gb|EDR26975.1| heat shock protein, putative [Entamoeba dispar SAW760]
          Length = 866

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 125/316 (39%), Positives = 195/316 (61%), Gaps = 33/316 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E+ R   LE+ L  R++GQ  A+  +S AI R   G  ++  P   F+FLG SG+GKT
Sbjct: 555 QTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D ++  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAVELF-DDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ I +MTSNL S  I +    
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIMKG--- 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           + +EG+                    +SR  K+ V++ I+K+ F + EFL R+++I+ F 
Sbjct: 731 VEREGQ--------------------VSRKVKETVME-IVKKTF-KPEFLNRLDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++ ++ V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVI 565
           + VV+ +     KS+I
Sbjct: 829 KTVVTSIT----KSII 840


>gi|414172088|ref|ZP_11426999.1| chaperone ClpB [Afipia broomeae ATCC 49717]
 gi|410893763|gb|EKS41553.1| chaperone ClpB [Afipia broomeae ATCC 49717]
          Length = 879

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 136/358 (37%), Positives = 207/358 (57%), Gaps = 39/358 (10%)

Query: 225 PSDYAEDA----NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINII 280
           P +  E+A    +I Q++ ++     D  +  E E+ +   +E+ L  R+VGQ  A+  +
Sbjct: 524 PGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLKMEEALGKRVVGQAEAVRAV 581

Query: 281 SAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQE 339
           + A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+  A +RLDMSEY E
Sbjct: 582 ATAVRRSRAGLQDPNRPIGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVRLDMSEYME 640

Query: 340 KHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRL 399
           KH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLLQ+ D+GRL
Sbjct: 641 KHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRL 700

Query: 400 TDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTIS 459
           TDG+G+T++ ++ + +MTSNL S  +         EGE+ S                   
Sbjct: 701 TDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSA------------------ 737

Query: 460 RHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA-KKALDKHN 518
              ++ V+  +++ HF R EFL RI+EI+ F    KSE+  +V  E+ F   +K L++  
Sbjct: 738 --VREQVMG-LVRAHF-RPEFLNRIDEIILFHRLQKSEMGRIV--EIQFTRLQKLLEERK 791

Query: 519 INIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           I +  D      LAD G+D  YGAR +K  ++R V   LA       +  G  V++ V
Sbjct: 792 IALTLDAAARDWLADKGWDPAYGARPLKRVIQRSVQDPLAEMILAGEVSDGDKVKISV 849


>gi|328948343|ref|YP_004365680.1| ATP-dependent chaperone ClpB [Treponema succinifaciens DSM 2489]
 gi|328448667|gb|AEB14383.1| ATP-dependent chaperone ClpB [Treponema succinifaciens DSM 2489]
          Length = 861

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/309 (43%), Positives = 188/309 (60%), Gaps = 36/309 (11%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E++KY  LE+ L  R++GQ  A+ ++S AI+R  +G +D + PL  FLF+G +G+GKT
Sbjct: 558 SSEKQKYLQLEEVLHKRVIGQNEAVQVVSDAIRRNRSGLSDPNRPLGSFLFIGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D+K +  R+DMSEY EK  V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 618 ELAKTLADFLFNDEK-SLTRIDMSEYMEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+ ++ K+ I +MTSNL S  I      
Sbjct: 677 SVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRVVDFKNTIIIMTSNLGSELI------ 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQ--PILKRHFRRDEFLGRINEIVY 489
                                 LD       KD   Q   +LK HF R EFL RI+EIV 
Sbjct: 731 ----------------------LDADTDEKMKDSRTQIDGLLKTHF-RPEFLNRIDEIVM 767

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEV 548
           F    KS +  +V  +L   AK+ L+   I I +D   V+ I   GYD  +GAR +K  V
Sbjct: 768 FGRLDKSCIGGIVKIQLERVAKR-LEDRRIAIKFDDSAVDFIAEKGYDPAFGARPVKRAV 826

Query: 549 ERQVVSQLA 557
           +  V + L+
Sbjct: 827 QTWVENPLS 835


>gi|253699226|ref|YP_003020415.1| ATP-dependent chaperone ClpB [Geobacter sp. M21]
 gi|251774076|gb|ACT16657.1| ATP-dependent chaperone ClpB [Geobacter sp. M21]
          Length = 862

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 194/323 (60%), Gaps = 32/323 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+RLK R+VGQ+ A+ ++S A++R  +G +D + P+  F+FLG +G+GKT
Sbjct: 557 ETESEKLVKMEERLKSRVVGQDEALTLVSNAVRRARSGLSDPNRPIGSFIFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E A+ LA ++  D  +A +R+DMSEYQEKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 617 ETARALASFLF-DDDQAVVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            +VLFDE++KAHP+V  V LQ+ D+GRLTDG+G+T++ K+++ +MTSNL S  I Q+   
Sbjct: 676 CIVLFDEIEKAHPEVFNVFLQILDDGRLTDGQGRTVDFKNSVIIMTSNLGSQWIQQYG-- 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                           K Q   ++ T+   FK               EFL R++EIV + 
Sbjct: 734 -----------ATDYGKMQSEVME-TLREAFK--------------PEFLNRVDEIVIYH 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
                 +  +VC +L    K+ L++  I + V +   E +  +GYD  YGAR +K  ++R
Sbjct: 768 ALPLERIKEIVCIQLQSLTKR-LEEKGIGLEVTEQAREFLAREGYDPAYGARPLKRALQR 826

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
           ++   LA    ++    G  VR+
Sbjct: 827 KIQDPLALMLLENKFAPGDTVRV 849


>gi|167383345|ref|XP_001736499.1| heat shock protein [Entamoeba dispar SAW760]
 gi|165901109|gb|EDR27269.1| heat shock protein, putative [Entamoeba dispar SAW760]
          Length = 866

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/316 (39%), Positives = 192/316 (60%), Gaps = 33/316 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E+ R   LE+ L  R++GQ  A+  +S AI R   G  ++  P   F+FLG SG+GKT
Sbjct: 555 QTEKTRLMNLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D ++  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAVELF-DDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ I +MTSNL S  I      
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIM----- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   +  +SR  K+ V++ I+K+ F + EFL R+++I+ F 
Sbjct: 729 ------------------KGVETEGQVSRKVKETVME-IVKKTF-KPEFLNRLDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++ ++ V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVI 565
           + VV+ +     KS+I
Sbjct: 829 KTVVTSIT----KSII 840


>gi|167386790|ref|XP_001737903.1| heat shock protein [Entamoeba dispar SAW760]
 gi|165899112|gb|EDR25793.1| heat shock protein, putative [Entamoeba dispar SAW760]
          Length = 866

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/316 (39%), Positives = 192/316 (60%), Gaps = 33/316 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E+ R   LE+ L  R++GQ  A+  +S AI R   G  ++  P   F+FLG SG+GKT
Sbjct: 555 QTEKTRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D ++  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAVELF-DDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ I +MTSNL S  I      
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIM----- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   +  +SR  K+ V++ I+K+ F + EFL R+++I+ F 
Sbjct: 729 ------------------KGVETEGQVSRKVKETVME-IVKKTF-KPEFLNRLDDIIIFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID--VETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++ ++ V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVI 565
           + VV+ +     KS+I
Sbjct: 829 KTVVTSIT----KSII 840


>gi|423382682|ref|ZP_17359938.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
 gi|401644602|gb|EJS62291.1| chaperone ClpB [Bacillus cereus BAG1X1-2]
          Length = 866

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|374597159|ref|ZP_09670163.1| ATP-dependent chaperone ClpB [Gillisia limnaea DSM 15749]
 gi|373871798|gb|EHQ03796.1| ATP-dependent chaperone ClpB [Gillisia limnaea DSM 15749]
          Length = 868

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 185/307 (60%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  +S A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLKLEDELHKRVVGQEEAIEAVSDAVRRSRAGLQDQKKPIGTFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDEAAMTRIDMSEYQERHSVSRLVGAPPGYIGYEEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S +I Q   +
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS-QIIQEKFE 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                               + LDV  +       V  +LK+   R EF+ RI++IV F 
Sbjct: 729 --------------------AVLDVETAMEAAKTEVLALLKQSV-RPEFINRIDDIVMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P S   +H +V  +L    KK L K  I +    +    LA  GYD  +GAR +K  V+R
Sbjct: 768 PLSAKNIHQIVGLQLK-GVKKMLLKQGITLDATEEAINFLAKRGYDPQFGARPVKRVVQR 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNKLS 833


>gi|115379537|ref|ZP_01466628.1| AAA ATPase [Stigmatella aurantiaca DW4/3-1]
 gi|115363446|gb|EAU62590.1| AAA ATPase [Stigmatella aurantiaca DW4/3-1]
          Length = 803

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 188/307 (61%), Gaps = 29/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E ++   +E RL +R++GQ SAI  +S A++R  +G  D + P+  F+FLG +G+GKT
Sbjct: 482 EGEVQKLVKMEDRLSNRVIGQHSAIEAVSNAVRRARSGLQDPNRPIGSFIFLGPTGVGKT 541

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E AK LA ++  D   + IR+DMSEY EKH VA+L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 542 ETAKALAEFLF-DDDSSMIRIDMSEYMEKHSVARLVGAPPGYVGYDEGGQLTEAVRRRPY 600

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAH DV  +LLQ+ DEGRLTD +G+T++ K+ + ++TSN+ S      ALQ
Sbjct: 601 SVILFDEIEKAHHDVFNILLQILDEGRLTDSQGRTVDFKNTVLILTSNIGS-----QALQ 655

Query: 432 LRKEGEE-FSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
               G+E   +RT      +G  +D               L+ HF R EFL R++EIV F
Sbjct: 656 EGMAGKETLDERT------RGEVMDA--------------LRSHF-RPEFLNRVDEIVLF 694

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
            P  +SE+H +V  +L    K   DK     + D     +   GYD  YGAR +K  +++
Sbjct: 695 EPLKRSEIHRIVDLQLARLQKLLADKRLTLDLTDAARNFLGERGYDPTYGARPLKRVIQK 754

Query: 551 QVVSQLA 557
            ++  LA
Sbjct: 755 HLMDPLA 761


>gi|423579476|ref|ZP_17555587.1| chaperone ClpB [Bacillus cereus VD014]
 gi|401218336|gb|EJR25018.1| chaperone ClpB [Bacillus cereus VD014]
          Length = 866

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|365876974|ref|ZP_09416480.1| ClpB protein [Elizabethkingia anophelis Ag1]
 gi|442587284|ref|ZP_21006102.1| ClpB protein [Elizabethkingia anophelis R26]
 gi|365755248|gb|EHM97181.1| ClpB protein [Elizabethkingia anophelis Ag1]
 gi|442562954|gb|ELR80171.1| ClpB protein [Elizabethkingia anophelis R26]
          Length = 864

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 193/307 (62%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  ++ AI+R   G +D+  P+  FLFLG++G+GKT
Sbjct: 549 QSEREKLLHLEDELHKRVVGQEEAIQAVADAIRRNRAGLSDEKKPIGSFLFLGTTGVGKT 608

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D+     R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 609 ELAKALAEFLFDDENN-MTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 667

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV   LLQ+ D+GRLTD KG+ +  K++I +MTSNL S+ I ++   
Sbjct: 668 SVVLLDEIEKAHPDVFNTLLQVLDDGRLTDNKGRVVNFKNSIIIMTSNLGSHLIQENFEN 727

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  E  E       I K++    D              +LK+   R EFL RI+E+V F 
Sbjct: 728 LTDENHE-----EVIEKTKTEVFD--------------LLKQSL-RPEFLNRIDEVVLFQ 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
           P SK E+  +V  +L  +  + L K NI +    D V+ ++  GYD  +GAR +K  +++
Sbjct: 768 PLSKKEIGRIVQYQLRGF-NEMLAKRNIIMTATQDAVDYLMNKGYDPVFGARPLKRVIQQ 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNKLS 833


>gi|373957808|ref|ZP_09617768.1| ATP-dependent chaperone ClpB [Mucilaginibacter paludis DSM 18603]
 gi|373894408|gb|EHQ30305.1| ATP-dependent chaperone ClpB [Mucilaginibacter paludis DSM 18603]
          Length = 870

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/325 (39%), Positives = 193/325 (59%), Gaps = 28/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+ GQE AI  IS AI+R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEREKLLHLEDELHKRVAGQEEAIEAISDAIRRSRAGLQDKRKPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D+  A +R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLFNDES-ALVRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNIGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +G E   R   I+K++    +               L R   R EFL RI+EI+ F 
Sbjct: 725 ENFQGYEEINRDEVIAKTKNELFE---------------LLRKTIRPEFLNRIDEIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI--LAD-GYDVHYGARSIKHEV 548
           P S+ E+  +V  +     +   +   + I  D   E +  LA  GYD  YGAR +K  +
Sbjct: 770 PLSRDEISDIVKLQFKHLQQTLAE---MGITLDASEEALDWLAQLGYDPQYGARPLKRVI 826

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL 573
           +++++++L+       + K S ++L
Sbjct: 827 QKKILNELSKQILAGKVDKDSKIKL 851


>gi|310823094|ref|YP_003955452.1| ATP-dependent chaperone protein clpb [Stigmatella aurantiaca
           DW4/3-1]
 gi|309396166|gb|ADO73625.1| ATP-dependent chaperone protein ClpB [Stigmatella aurantiaca
           DW4/3-1]
          Length = 876

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 188/307 (61%), Gaps = 29/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E ++   +E RL +R++GQ SAI  +S A++R  +G  D + P+  F+FLG +G+GKT
Sbjct: 555 EGEVQKLVKMEDRLSNRVIGQHSAIEAVSNAVRRARSGLQDPNRPIGSFIFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E AK LA ++  D   + IR+DMSEY EKH VA+L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 615 ETAKALAEFLF-DDDSSMIRIDMSEYMEKHSVARLVGAPPGYVGYDEGGQLTEAVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAH DV  +LLQ+ DEGRLTD +G+T++ K+ + ++TSN+ S      ALQ
Sbjct: 674 SVILFDEIEKAHHDVFNILLQILDEGRLTDSQGRTVDFKNTVLILTSNIGS-----QALQ 728

Query: 432 LRKEGEE-FSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
               G+E   +RT      +G  +D               L+ HF R EFL R++EIV F
Sbjct: 729 EGMAGKETLDERT------RGEVMDA--------------LRSHF-RPEFLNRVDEIVLF 767

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
            P  +SE+H +V  +L    K   DK     + D     +   GYD  YGAR +K  +++
Sbjct: 768 EPLKRSEIHRIVDLQLARLQKLLADKRLTLDLTDAARNFLGERGYDPTYGARPLKRVIQK 827

Query: 551 QVVSQLA 557
            ++  LA
Sbjct: 828 HLMDPLA 834


>gi|86751350|ref|YP_487846.1| ATPase AAA [Rhodopseudomonas palustris HaA2]
 gi|86574378|gb|ABD08935.1| AAA_5 ATPase [Rhodopseudomonas palustris HaA2]
          Length = 879

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/368 (36%), Positives = 208/368 (56%), Gaps = 37/368 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD    +N+G +  +     +I Q++ ++     D   E E E+  +  +E+++  R+VG
Sbjct: 516 ADIEANENAGEMMEEAVTADHIAQVVSRWTGVPVDKMLEGEKEKLLR--MEEQIGKRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A++ +S A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D + A +R
Sbjct: 574 QFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAQYLF-DDETAMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH VA+LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVARLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + VMTSNL S  +         EGE              
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQ-----PEGE-------------- 733

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAK 511
              D  + R      V  +++ HF R EFL R++EI+ F    K+E+  +V  + +  AK
Sbjct: 734 ---DTGVVR----EQVMDMVRAHF-RPEFLNRVDEIILFHRLQKNEMGRIVDIQFSRLAK 785

Query: 512 KALDKHNINIVWDIDVET---ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKG 568
              D+    IV D+D      +   G+D  YGAR +K  ++R V   LA       +  G
Sbjct: 786 LLEDR---KIVLDLDPAARDWLAEKGWDPAYGARPLKRVIQRHVQDPLAEMILDGTVSDG 842

Query: 569 SFVRLYVQ 576
           + V +  +
Sbjct: 843 AKVAISTE 850


>gi|229149475|ref|ZP_04277711.1| Chaperone protein clpB 1 [Bacillus cereus m1550]
 gi|228634117|gb|EEK90710.1| Chaperone protein clpB 1 [Bacillus cereus m1550]
          Length = 866

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|123967762|ref|YP_001008620.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
           [Prochlorococcus marinus str. AS9601]
 gi|123197872|gb|ABM69513.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
           ClpB [Prochlorococcus marinus str. AS9601]
          Length = 920

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/308 (41%), Positives = 190/308 (61%), Gaps = 23/308 (7%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + ER+K   LE  L ++++GQE AI ++SAAI+R   G      P+  FLF+G +G+GKT
Sbjct: 603 SNERKKLVNLETELSEKVIGQEKAIEVVSAAIRRARVGMKSPKRPIGSFLFMGPTGVGKT 662

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+++A +RLDMSEY EK+ VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 663 ELAKSLATVLF-DEEDALLRLDMSEYMEKNAVARLLGAPPGYIGYEEGGQLTEAVRRKPY 721

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH +V  +LLQ+ DEGRLTD +G+T++ K+ + +MTSNLA   I +++  
Sbjct: 722 SVILLDEIEKAHAEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKSILEYS-- 779

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                ++ SK    + K Q + LD +IS                 R EFL RI+E+V F 
Sbjct: 780 -----QKISKSEGKLEKDQQT-LDDSISNALS----------SIFRPEFLNRIDEVVKFD 823

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVER 550
           P S  EL  ++  +     K  L +  INI  D  V   I  D Y+  YGAR +  E+ R
Sbjct: 824 PLSIDELQKIIILQTEDL-KNLLLEQKINIAIDKKVINKIANDSYEPEYGARPLSRELRR 882

Query: 551 QVVSQLAA 558
           Q+ + LAA
Sbjct: 883 QIENPLAA 890


>gi|30019323|ref|NP_830954.1| ClpB protein [Bacillus cereus ATCC 14579]
 gi|218235585|ref|YP_002365956.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus B4264]
 gi|228951654|ref|ZP_04113757.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228957544|ref|ZP_04119296.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229043019|ref|ZP_04190750.1| Chaperone protein clpB 1 [Bacillus cereus AH676]
 gi|229108730|ref|ZP_04238340.1| Chaperone protein clpB 1 [Bacillus cereus Rock1-15]
 gi|229126580|ref|ZP_04255594.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-Cer4]
 gi|229143880|ref|ZP_04272299.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST24]
 gi|296501865|ref|YP_003663565.1| ClpB protein [Bacillus thuringiensis BMB171]
 gi|423423352|ref|ZP_17400383.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
 gi|423505134|ref|ZP_17481725.1| chaperone ClpB [Bacillus cereus HD73]
 gi|423629860|ref|ZP_17605608.1| chaperone ClpB [Bacillus cereus VD154]
 gi|449088057|ref|YP_007420498.1| ClpB protein [Bacillus thuringiensis serovar kurstaki str. HD73]
 gi|54035819|sp|Q81GM5.1|CLPB_BACCR RecName: Full=Chaperone protein ClpB
 gi|29894866|gb|AAP08155.1| ClpB protein [Bacillus cereus ATCC 14579]
 gi|218163542|gb|ACK63534.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus B4264]
 gi|228639641|gb|EEK96052.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST24]
 gi|228656969|gb|EEL12793.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-Cer4]
 gi|228674760|gb|EEL29994.1| Chaperone protein clpB 1 [Bacillus cereus Rock1-15]
 gi|228726359|gb|EEL77585.1| Chaperone protein clpB 1 [Bacillus cereus AH676]
 gi|228802136|gb|EEM49001.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228808047|gb|EEM54563.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|296322917|gb|ADH05845.1| ClpB protein [Bacillus thuringiensis BMB171]
 gi|401115634|gb|EJQ23482.1| chaperone ClpB [Bacillus cereus BAG3X2-2]
 gi|401266145|gb|EJR72224.1| chaperone ClpB [Bacillus cereus VD154]
 gi|402454533|gb|EJV86324.1| chaperone ClpB [Bacillus cereus HD73]
 gi|449021814|gb|AGE76977.1| ClpB protein [Bacillus thuringiensis serovar kurstaki str. HD73]
          Length = 866

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|406592507|ref|YP_006739687.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci CP3]
 gi|406594159|ref|YP_006741789.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci MN]
 gi|407456864|ref|YP_006735437.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci VS225]
 gi|407460816|ref|YP_006738591.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci WC]
 gi|405782591|gb|AFS21339.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci MN]
 gi|405784125|gb|AFS22872.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci VS225]
 gi|405787202|gb|AFS25946.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci WC]
 gi|405788379|gb|AFS27122.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci CP3]
          Length = 384

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 89  RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 147

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 148 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADREVF 207

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G E SK      
Sbjct: 208 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYCA---KKGSEVSK------ 258

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  D  +S      VV P L+++F   EF+ RI++I+ F+P S  ++  +V  ++ 
Sbjct: 259 -------DTVLS------VVAPTLRKYF-SPEFINRIDDILPFIPLSTEDIVKIVGIQMR 304

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 305 RVAQRMLERR-VTLTWDDSVILYLSEQGYDSAFGARPLKRLIQQKVVTLLSKALLKGDIK 363

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  SK+V
Sbjct: 364 PDTSIELTM--SKDV 376


>gi|336398905|ref|ZP_08579705.1| ATP-dependent chaperone ClpB [Prevotella multisaccharivorax DSM
           17128]
 gi|336068641|gb|EGN57275.1| ATP-dependent chaperone ClpB [Prevotella multisaccharivorax DSM
           17128]
          Length = 862

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/378 (36%), Positives = 211/378 (55%), Gaps = 39/378 (10%)

Query: 187 FLGFSALHYGVVAG-----NTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKY 241
           +   + + YG + G     N   ++L    G D  V++    + SD     +I +++ ++
Sbjct: 490 YAKVAEIRYGKLKGLQDDINAIQLQLHATQGGDAMVRE---EVTSD-----DIAEVVSRW 541

Query: 242 AEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-F 300
                 + R  ++E  +   LE  L  R+VGQ+ AIN ++ A++R   G  D   P+  F
Sbjct: 542 T--GIPVTRMMQSEREKLLHLEDELHKRVVGQDEAINAVADAVRRSRAGLQDPKRPIASF 599

Query: 301 LFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGG 360
           +FLG++G GKTELAK LA Y+  D+     R+DMSEYQEK  V +LIGAPPGY+G+D+GG
Sbjct: 600 IFLGTTGTGKTELAKALADYLFNDEN-MMTRIDMSEYQEKFSVTRLIGAPPGYVGYDEGG 658

Query: 361 QLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNL 420
           QLT+ +++ P +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL
Sbjct: 659 QLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNL 718

Query: 421 ASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEF 480
            S  I      L     E                  ++    + HV+  +LK+   R EF
Sbjct: 719 GSQYIQSRFADLNDYNRE------------------SVINDTRSHVMD-MLKKTI-RPEF 758

Query: 481 LGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHY 539
           L RI++I+ FLP +K ++  +V  ++N  A K L+     + W       LA  GYD  +
Sbjct: 759 LNRIDDIIMFLPLTKDQIGKVVTLQMNRVA-KMLEPQGFTLKWTTSAIDWLAGVGYDPEF 817

Query: 540 GARSIKHEVERQVVSQLA 557
           GAR +K  ++  V++ L+
Sbjct: 818 GARPVKRAIQDYVLNDLS 835


>gi|423618579|ref|ZP_17594413.1| chaperone ClpB [Bacillus cereus VD115]
 gi|401253156|gb|EJR59400.1| chaperone ClpB [Bacillus cereus VD115]
          Length = 866

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARTGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   LK HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLKGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|423588334|ref|ZP_17564421.1| chaperone ClpB [Bacillus cereus VD045]
 gi|423647208|ref|ZP_17622778.1| chaperone ClpB [Bacillus cereus VD169]
 gi|401226319|gb|EJR32859.1| chaperone ClpB [Bacillus cereus VD045]
 gi|401286602|gb|EJR92422.1| chaperone ClpB [Bacillus cereus VD169]
          Length = 866

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|91978556|ref|YP_571215.1| ATPase [Rhodopseudomonas palustris BisB5]
 gi|91685012|gb|ABE41314.1| ATPase AAA-2 [Rhodopseudomonas palustris BisB5]
          Length = 879

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/354 (37%), Positives = 208/354 (58%), Gaps = 37/354 (10%)

Query: 208 LLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLK 267
           L K  AD    +N+G +  +     +I Q++ ++     D   E E E+  +  +E ++ 
Sbjct: 511 LEKKLADIEANENAGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLR--MEDQIG 568

Query: 268 DRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKK 326
            R+VGQ  A++ +S A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D +
Sbjct: 569 KRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAQYLF-DDE 627

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
            A +RLDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV
Sbjct: 628 TAMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDV 687

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
             VLLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S  +                    +
Sbjct: 688 FNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYL--------------------V 727

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
           ++ +G + +V      ++ V+  +++ HF R EFL R++EI+ F    K+E+  +V  +L
Sbjct: 728 NQPEGEDTEV-----VREQVIG-MVRGHF-RPEFLNRVDEIILFHRLQKTEMGRIVDIQL 780

Query: 507 NFWAKKALDKHNINIVWDIDVET---ILADGYDVHYGARSIKHEVERQVVSQLA 557
              AK   D+    IV D+D      +   G+D  YGAR +K  ++R V   LA
Sbjct: 781 GRLAKLLEDR---KIVLDLDPAARDWLAEKGWDPAYGARPLKRVIQRHVQDPLA 831


>gi|269216425|ref|ZP_06160279.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
 gi|269129954|gb|EEZ61036.1| ATP-dependent chaperone protein ClpB [Slackia exigua ATCC 700122]
          Length = 891

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/298 (40%), Positives = 189/298 (63%), Gaps = 9/298 (3%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE RL +R++GQ+ A++ ++ AI+R   G +D + P+  FLFLG +G+GKTELAK LA Y
Sbjct: 567 LEDRLHERVIGQDEAVHAVAGAIRRNRAGLSDPNRPIGSFLFLGPTGVGKTELAKALAEY 626

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D ++A +R+DMSEY EK  V +LIGAPPGY+G+D+GGQLT+ +++ P  VVL DE++
Sbjct: 627 LF-DTEKAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYTVVLLDEIE 685

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAH DV  VLLQ+ D+GRLTDG+G+ +  K+AI +MTSN+ S  I +++   R+  E   
Sbjct: 686 KAHQDVFNVLLQVLDDGRLTDGQGREVSFKNAIIIMTSNVGSQSIREYS--AREAEESMG 743

Query: 441 KRTPSISKSQGSNLDVTISR-HFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELH 499
           K    + ++  S     ++  H K   +   L + F R EFL RI++++ F   S  E+ 
Sbjct: 744 KMVEDMMQADMSTAAQRLAELHRK---ISESLSQTF-RPEFLNRIDDVITFNGLSSQEME 799

Query: 500 TLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
            +V  +L    ++  D+     V    +E +  DG+D  YGAR +K  ++R+VV ++A
Sbjct: 800 PIVRLQLKAVRERLEDRRITLDVTPAAIEQLAIDGFDPVYGARPLKRLIQREVVDRIA 857


>gi|229068826|ref|ZP_04202122.1| Chaperone protein clpB 1 [Bacillus cereus F65185]
 gi|229078466|ref|ZP_04211027.1| Chaperone protein clpB 1 [Bacillus cereus Rock4-2]
 gi|228704888|gb|EEL57313.1| Chaperone protein clpB 1 [Bacillus cereus Rock4-2]
 gi|228714334|gb|EEL66213.1| Chaperone protein clpB 1 [Bacillus cereus F65185]
          Length = 866

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|402828693|ref|ZP_10877578.1| ATP-dependent chaperone protein ClpB [Slackia sp. CM382]
 gi|402285851|gb|EJU34331.1| ATP-dependent chaperone protein ClpB [Slackia sp. CM382]
          Length = 891

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/298 (40%), Positives = 189/298 (63%), Gaps = 9/298 (3%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE RL +R++GQ+ A++ ++ AI+R   G +D + P+  FLFLG +G+GKTELAK LA Y
Sbjct: 567 LEDRLHERVIGQDEAVHAVAGAIRRNRAGLSDPNRPIGSFLFLGPTGVGKTELAKALAEY 626

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D ++A +R+DMSEY EK  V +LIGAPPGY+G+D+GGQLT+ +++ P  VVL DE++
Sbjct: 627 LF-DTEKAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYTVVLLDEIE 685

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAH DV  VLLQ+ D+GRLTDG+G+ +  K+AI +MTSN+ S  I +++   R+  E   
Sbjct: 686 KAHQDVFNVLLQVLDDGRLTDGQGREVSFKNAIIIMTSNVGSQSIREYS--AREAEESMG 743

Query: 441 KRTPSISKSQGSNLDVTISR-HFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELH 499
           K    + ++  S     ++  H K   +   L + F R EFL RI++++ F   S  E+ 
Sbjct: 744 KMVEDMMQADVSTAAQRLAELHRK---INESLSQTF-RPEFLNRIDDVITFNGLSSQEME 799

Query: 500 TLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
            +V  +L    ++  D+     V    +E +  DG+D  YGAR +K  ++R+VV ++A
Sbjct: 800 PIVRLQLKAVRERLEDRRITLDVTPAAIEQLAIDGFDPVYGARPLKRLIQREVVDRIA 857


>gi|384098339|ref|ZP_09999456.1| chaperone protein clpB [Imtechella halotolerans K1]
 gi|383835835|gb|EID75255.1| chaperone protein clpB [Imtechella halotolerans K1]
          Length = 866

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 196/328 (59%), Gaps = 35/328 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 550 QSEREKLLKLEDELHKRVVGQEEAIQAVSDAIRRSRAGLQDAKRPVGSFLFLGTTGVGKT 609

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  RLDMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 610 ELAKALAEYLF-DDENAMTRLDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 668

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q
Sbjct: 669 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGS-----HLIQ 723

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F     S+  +        I R   D  V  +LK+  R  EFL RI++IV F 
Sbjct: 724 -----EAFDTFPKSVESA--------IERAKID--VLGLLKQTVR-PEFLNRIDDIVMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI--LAD-GYDVHYGARSIKHEV 548
           P ++  +  +V  +L   +K    +H   I  D   E I  LA  GYD+ +GAR +K  +
Sbjct: 768 PLTEKHIRDIVRLQLKSVSKMLAQQH---ITLDATEEAIDYLAQRGYDIQFGARPVKRTI 824

Query: 549 ERQVVSQLA------AAHEKSVIGKGSF 570
           +++V++ L+      A H +S+I   +F
Sbjct: 825 QKEVLNALSKEILKGAIHTESIILLDAF 852


>gi|219852795|ref|YP_002467227.1| ATP-dependent chaperone ClpB [Methanosphaerula palustris E1-9c]
 gi|219547054|gb|ACL17504.1| ATP-dependent chaperone ClpB [Methanosphaerula palustris E1-9c]
          Length = 863

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 199/312 (63%), Gaps = 24/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  ++E+++   LE  L  R+VGQE AI  +S AI+R   G  D   P+  F+FLG++
Sbjct: 546 VSRMLQSEKQKLLSLEVELHKRVVGQEEAIGAVSDAIRRSRAGLQDTKRPIGSFIFLGTT 605

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA  +  ++  + +R+DMSEYQE+H V++LIGAPPGY+G+++ GQLT+ +
Sbjct: 606 GVGKTELAKALAEILFNNEN-SMVRIDMSEYQERHTVSRLIGAPPGYVGYEESGQLTEAV 664

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+T++ K+ I +MTSN+ S    
Sbjct: 665 RRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNTIIIMTSNIGS---- 720

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
            H +Q             ++ ++   N D    R  ++  V  +LK+   R EFL RI+E
Sbjct: 721 -HIIQ------------ENLEEATNKNRDEVFDRTREE--VFDLLKKTI-RPEFLNRIDE 764

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIK 545
           IV F P ++ E+ T+V  +L    +K L+K +I +    +  T++A  G+D  +GAR IK
Sbjct: 765 IVMFKPLTQDEIQTVVELQLGL-VQKMLEKSDIRLKVSKNAITLIAIQGFDPQFGARPIK 823

Query: 546 HEVERQVVSQLA 557
             +++ ++++L+
Sbjct: 824 RVIQKNLLNELS 835


>gi|320539058|ref|ZP_08038732.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
 gi|320030898|gb|EFW12903.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
          Length = 859

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/397 (34%), Positives = 224/397 (56%), Gaps = 37/397 (9%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YG      ++ EL  +  A    + N+  +  +   DA I ++L +       + 
Sbjct: 498 MSELQYG------KLPELEKQLAAATQAEGNTMKLLRNRVTDAEIAEVLARAT--GIPVA 549

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  E E  +   LEQ L  R++GQ+ A++ +S AI+R   G +D + P+  FLFLG +G+
Sbjct: 550 RMLEGERDKLLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGV 609

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++
Sbjct: 610 GKTELCKALASFLF-DSDEAIVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ + +H
Sbjct: 669 RPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLVQEH 728

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
             Q+  E                           K+ V++ ++  HF R EF+ RI+E+V
Sbjct: 729 FGQMSYE-------------------------QMKESVME-MVSHHF-RPEFINRIDEVV 761

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F P S++ +  +V  +L    K+  ++     + +  +E +   G+D  YGAR +K  +
Sbjct: 762 VFHPLSQNHIAEIVKIQLARLYKRLEERGYEVTMTEPALELLGKTGFDPVYGARPLKRAI 821

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDS 585
           ++++ + LA      ++  G  V L V+    V+  S
Sbjct: 822 QQEIENPLAQEILSGMLIPGKLVTLDVENEHIVAHQS 858


>gi|206900106|ref|YP_002250615.1| ATPase, AAA family [Dictyoglomus thermophilum H-6-12]
 gi|206739209|gb|ACI18267.1| ATPase, AAA family [Dictyoglomus thermophilum H-6-12]
          Length = 894

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 203/328 (61%), Gaps = 28/328 (8%)

Query: 255 EERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           E+ R   LE++L +R+VGQ+ AI  +S AI+    G  + + P+  FLFLG +G+GKTEL
Sbjct: 577 EKERLLKLEEKLHERVVGQDEAIKAVSDAIRLARAGLREKNRPIATFLFLGPTGVGKTEL 636

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           A+ LA+ +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+++GGQLT+++++ P +V
Sbjct: 637 ARALAWAVFGDE-DAIIRIDMSEYMERHTVSRLIGAPPGYVGYEEGGQLTEKVRRRPYSV 695

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           +L DE++KAHPDV  +LLQ+FD GRLTDGKG+ ++  + I +MTSN+ S+ I Q  L   
Sbjct: 696 ILLDEIEKAHPDVHNILLQVFDAGRLTDGKGRVVDFTNTIIIMTSNIGSD-IIQANL--- 751

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
                             +  D       K+ ++  ILKR+F R EFL RI+EI+ F   
Sbjct: 752 ----------------TATGRDKLSYEQLKEKLMD-ILKRYF-RPEFLNRIDEIIVFHAL 793

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQV 552
           +K ++  +V  +L    ++     NI +V+D  V    A+ GY   +GAR +K ++  ++
Sbjct: 794 TKEQVRDIVKLQLE-RVRRTARAQNIELVFDESVVDFFAEIGYSPEFGARELKRKIRNEL 852

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
            ++LA A  +  I +G  +R  V ++KE
Sbjct: 853 ETKLAKAMLEGAIQEGDKIR--VVYNKE 878


>gi|154490198|ref|ZP_02030459.1| hypothetical protein PARMER_00430 [Parabacteroides merdae ATCC
           43184]
 gi|154089090|gb|EDN88134.1| ATP-dependent chaperone protein ClpB [Parabacteroides merdae ATCC
           43184]
          Length = 862

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 195/307 (63%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AI+ I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKEKLLHLESELHTRVIGQEEAISAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K TP   ++    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFEKMTP---ETHDKVVDET-----KVQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ E+  +V  +LN   KK L ++ I + +     T ++D G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVIVQLN-SVKKMLAQNGIALEFTDAALTFISDKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLA 557
            V+++L+
Sbjct: 829 YVLNELS 835


>gi|415884520|ref|ZP_11546448.1| ATPase [Bacillus methanolicus MGA3]
 gi|387590189|gb|EIJ82508.1| ATPase [Bacillus methanolicus MGA3]
          Length = 879

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/325 (37%), Positives = 199/325 (61%), Gaps = 27/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE  L +R+VGQ+ A+N++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLESILHERVVGQDEAVNLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D ++  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKALAQSLF-DSEDHIIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRNPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S+ +      
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSSILL----- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G+N D  I+   KD V+   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGTNKDGEITDETKDKVLSQ-LRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P S  E+  +V + ++   K+  D+    ++ +   E I  +G+D  YGAR +K  ++R 
Sbjct: 773 PLSFEEIKQIVAKLISDLQKRLNDQEIRLVITNEAQEYIAENGFDPIYGARPLKRFIQRH 832

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           V ++LA    K  I + + V + ++
Sbjct: 833 VETKLAREIVKGSIREQAVVEIGIE 857


>gi|414165245|ref|ZP_11421492.1| chaperone ClpB [Afipia felis ATCC 53690]
 gi|410883025|gb|EKS30865.1| chaperone ClpB [Afipia felis ATCC 53690]
          Length = 878

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/323 (39%), Positives = 197/323 (60%), Gaps = 31/323 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E+ L  R++GQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 553 EGEKDKLLRMEEMLGKRVIGQAQAVRAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA Y+  D + A +R+DMSEY EKH VA+LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 613 ELTKALAEYLF-DDETALVRMDMSEYMEKHSVARLIGAPPGYVGYDEGGALTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSN+           
Sbjct: 672 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNI----------- 720

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G EF      +++ +G + +       +D V+  +++ HF R EFL RI+EI+ F 
Sbjct: 721 ----GAEF-----LVNQPEGEDTNA-----VRDQVMG-MVRTHF-RPEFLNRIDEIILFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              KSE+ ++V  + N   +K L+   I++V D      LA+ G+D  YGAR +K  ++R
Sbjct: 765 RLQKSEMGSIVEIQFNRL-RKLLEDRKIDLVLDKKGRDWLAEKGWDPAYGARPLKRVIQR 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
            V   LA       +  G+ V++
Sbjct: 824 SVQDPLAEMVLAGEVQDGATVKI 846


>gi|257062871|ref|YP_003142543.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
 gi|256790524|gb|ACV21194.1| ATP-dependent chaperone ClpB [Slackia heliotrinireducens DSM 20476]
          Length = 891

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 193/315 (61%), Gaps = 14/315 (4%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE +L +R+VGQ+ A++ ++ AI+R   G +D D P+  FLFLG +G+GKTELAK LA Y
Sbjct: 567 LEAKLHERVVGQDEAVSAVAGAIRRNRAGLSDPDRPIGSFLFLGPTGVGKTELAKALAEY 626

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D + A +R+DMSEY EK  V +LIGAPPGY+G+D+GGQLT+ +++ P  V+L DE++
Sbjct: 627 LF-DTERAMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYTVILLDEIE 685

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTDG+G+ +  K+AI +MTSN+ S  I  +  Q +++ +  +
Sbjct: 686 KAHPDVFNILLQVLDDGRLTDGQGRVVNFKNAIIIMTSNVGSQSIRDYGTQRQQQQQSGN 745

Query: 441 ----KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKS 496
                 +  I K   S  D+          V   L+  F R EFL RI+EI+ F   +  
Sbjct: 746 MMEDMMSGDIEKLAQSMADLQTK-------VNDALRNTF-RPEFLNRIDEIITFNALTSK 797

Query: 497 ELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQL 556
           E+  +V  ++    K+  ++    +V    VE +  DGYD  +GAR +K  ++R+VV ++
Sbjct: 798 EIEPIVGLQIKDVQKRLAERRIDLVVSPAAVEQLAIDGYDPVFGARPLKRLIQREVVDRV 857

Query: 557 AAAHEKSVIGKGSFV 571
           A       I +G+ V
Sbjct: 858 ANEMVAGHIMEGATV 872


>gi|300916538|ref|ZP_07133268.1| ATPase family protein [Escherichia coli MS 115-1]
 gi|300416162|gb|EFJ99472.1| ATPase family protein [Escherichia coli MS 115-1]
          Length = 964

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 195/317 (61%), Gaps = 27/317 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  + D P+  FLFLG +G+GKTE
Sbjct: 614 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGDKPVATFLFLGPTGVGKTE 673

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 674 LAKALAESIYGDEG-ALLRIDMSEYGERHAVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 732

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I +     
Sbjct: 733 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKAG 792

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
              GEE+ K     +KS+                V  +L+ HF R EF+ RI+EI+ F  
Sbjct: 793 GAAGEEYEK-----TKSE----------------VMDVLRGHF-RPEFINRIDEIIVFHA 830

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  +
Sbjct: 831 LGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSE 889

Query: 552 VVSQLAAAHEKSVIGKG 568
           + + LA       IGKG
Sbjct: 890 LETALAREMLGGGIGKG 906


>gi|300867974|ref|ZP_07112613.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
 gi|300333995|emb|CBN57791.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
          Length = 870

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/382 (35%), Positives = 222/382 (58%), Gaps = 42/382 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGH-IPSDYAEDANIKQILQKYAEKYADLQ 249
           + L YG +   TE+ + L ++    T    +G  +  +   +++I +I+ K+      + 
Sbjct: 501 AELKYGTL---TELQKQLEEAETKLTATQTTGQTLLREEVTESDIAEIISKWT--GIPIS 555

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGI 308
           +  E+E ++   LE  L  R++GQ+ A+  ++ AI+R   G  D + P+  F+FLG +G+
Sbjct: 556 KLVESEMQKLLHLEDELHKRVIGQDEAVTAVADAIQRSRAGLADPNRPVASFIFLGPTGV 615

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAK LA Y+  D ++A +R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ +++
Sbjct: 616 GKTELAKALAAYLF-DTEDAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRR 674

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P AV+LFDE++KAHPDV  ++LQ+ D+GR+TD +G T++ K+A+ +MTSN+ S    Q+
Sbjct: 675 RPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNAVIIMTSNVGS----QY 730

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
            L +  + EE   R                        V   ++  F R EFL RI+E +
Sbjct: 731 ILDVGGDDEEMRSR------------------------VMEAMRGTF-RPEFLNRIDETI 765

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F   SK EL  +V  ++    K+  D+     + D  ++ +   GYD  YGAR +K  +
Sbjct: 766 IFQGLSKQELRQIVKLQIGRLDKRLADRKMSIKLSDSALDFLAEVGYDPVYGARPLKRAI 825

Query: 549 ERQVVSQLAAAHEKSVIGKGSF 570
           +R++ +Q+A    KS++ +G F
Sbjct: 826 QRELETQIA----KSIL-RGDF 842


>gi|442322518|ref|YP_007362539.1| ATP-dependent chaperone protein ClpB [Myxococcus stipitatus DSM
           14675]
 gi|441490160|gb|AGC46855.1| ATP-dependent chaperone protein ClpB [Myxococcus stipitatus DSM
           14675]
          Length = 874

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/311 (39%), Positives = 191/311 (61%), Gaps = 27/311 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  E E ++   +E RL  R++GQ SAI  +S A++R  +G  D + P+  F+FLG +
Sbjct: 550 VSRLMEGEVQKLVHMEDRLGQRVIGQRSAIEAVSNAVRRARSGLQDPNRPIGSFIFLGPT 609

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTE AK LA ++  D   A +R+DMSEY EKH V++L+GAPPGY+G+++GGQLT+ +
Sbjct: 610 GVGKTETAKALAEFLF-DDDTAMVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEAV 668

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P  VVLFDE++KAHPDV  +LLQ+ DEGRLTD +G+T++ K+A+ +MTSN+ S +I 
Sbjct: 669 RRRPYTVVLFDEIEKAHPDVFNILLQILDEGRLTDSQGRTVDFKNAVLIMTSNIGSADI- 727

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           Q  +  + E +E         K++   +D               L+ HF R EFL R++E
Sbjct: 728 QAGMAGKDELDE---------KTRNDAMDA--------------LRAHF-RPEFLNRVDE 763

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           IV F P  K +++ +V  +L   ++   +K     + +   E +   GYD  YGAR +K 
Sbjct: 764 IVIFEPLRKKDIYRIVDLQLAKLSQLLAEKRLTLELTEPARELLAERGYDPTYGARPLKR 823

Query: 547 EVERQVVSQLA 557
            V+R ++  LA
Sbjct: 824 AVQRNLLDPLA 834


>gi|229189360|ref|ZP_04316380.1| Chaperone protein clpB 1 [Bacillus cereus ATCC 10876]
 gi|228594154|gb|EEK51953.1| Chaperone protein clpB 1 [Bacillus cereus ATCC 10876]
          Length = 866

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELSDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|423609680|ref|ZP_17585541.1| chaperone ClpB [Bacillus cereus VD107]
 gi|401250695|gb|EJR56987.1| chaperone ClpB [Bacillus cereus VD107]
          Length = 866

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPTYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|408671904|ref|YP_006871652.1| ATP-dependent chaperone ClpB [Emticicia oligotrophica DSM 17448]
 gi|387853528|gb|AFK01625.1| ATP-dependent chaperone ClpB [Emticicia oligotrophica DSM 17448]
          Length = 876

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/332 (38%), Positives = 201/332 (60%), Gaps = 23/332 (6%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L+ R+ GQE AI +++ A++R   G  D   P+  FLFLGS+G+GKT
Sbjct: 553 QSEREKLLHLEDELRRRVAGQEEAIELVADAVRRSRAGMQDPKKPIGSFLFLGSTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D   A +R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 613 ELAKALAEYLFNDDS-AMVRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  +LLQ+ DEGRLTD KG+T   K+ I +MTSN+ S+ I +  L+
Sbjct: 672 SVILLDEIEKAHPDVWNILLQVLDEGRLTDNKGRTANFKNTIIIMTSNIGSHFIQEKYLE 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                          SK       +      K+ V+  +LK    R EFL RI+EIV F 
Sbjct: 732 ---------------SKGDEKGWQLFYKEEAKNEVMN-LLKASV-RPEFLNRIDEIVLFD 774

Query: 492 PFSKSELHTLVCRELNF-WAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVE 549
           P +K+ +  +V  ++ F   +  L +  I +   D  ++ +  +GYD+ +GAR +K  ++
Sbjct: 775 PLTKNNIRRIV--QIQFKQIQSRLAEQGITLEASDAVLDKLGEEGYDITFGARPLKRVLQ 832

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           R+V+++L+       + K S V + V  + E+
Sbjct: 833 RRVLNELSKQILSGKVLKDSVVMMEVDNAGEI 864


>gi|407459446|ref|YP_006737549.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci M56]
 gi|405786047|gb|AFS24792.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci M56]
          Length = 864

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADREVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G E SK      
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYC---AKKGSEVSK------ 738

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  D  +S      VV P L+++F   EF+ RI++I+ F+P S  ++  +V  ++ 
Sbjct: 739 -------DTVLS------VVAPTLRKYF-SPEFINRIDDILPFIPLSTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRMLERR-VTLTWDDSVILYLSEQGYDSAFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  SK+V
Sbjct: 844 PDTSIELTM--SKDV 856


>gi|194292427|ref|YP_002008334.1| ATP-dependent protease [Cupriavidus taiwanensis LMG 19424]
 gi|193226331|emb|CAQ72280.1| ATP-dependent protease [Cupriavidus taiwanensis LMG 19424]
          Length = 929

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/306 (40%), Positives = 193/306 (63%), Gaps = 27/306 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E+RL++RIVGQ+ A+  +S A++    G    + P+  FLFLG +G+GKTE
Sbjct: 581 EERQKLLKMEERLRERIVGQDDAVVAVSDAVRLSRAGLGQANRPIATFLFLGPTGVGKTE 640

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D ++A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 641 LAKALAESVFGD-EQAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRQPYS 699

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + + + TSNL +  I ++    
Sbjct: 700 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTVIIATSNLGAPIIMEN---- 755

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                        + KS+ S +D    R      +  +LK HF R EFL RI++I+ F  
Sbjct: 756 -------------LEKSEASRMDDKALR----EALMKVLKGHF-RPEFLNRIDDIIVFHA 797

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
            S+  +  +V  +L   A+ A    +I + +D   ++ ++  GY   +GAR ++ ++ +Q
Sbjct: 798 LSRENIRAIVQIQLERVARTAA-AQDIAVRFDAALIDHLVEVGYQPEFGARELRRQIRQQ 856

Query: 552 VVSQLA 557
           V + LA
Sbjct: 857 VETALA 862


>gi|445115470|ref|ZP_21378256.1| chaperone ClpB [Prevotella nigrescens F0103]
 gi|444840407|gb|ELX67440.1| chaperone ClpB [Prevotella nigrescens F0103]
          Length = 862

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 181/300 (60%), Gaps = 24/300 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI+ ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEEELHKRVIGQDEAISAVANAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDET-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S  I Q          EF+
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSQYIQQ----------EFA 728

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
           K T +  +    N   T+    K  +          R EFL RI+E + FLP ++SE+  
Sbjct: 729 KLTDNNRQEIIDNARNTVMDMLKQTI----------RPEFLNRIDETIMFLPLTQSEIAQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  +L    +  L      + W D  V+ +   GYD  +GAR +K  ++  V++ L+ A
Sbjct: 779 IVTLQLK-RVEAMLAPQGFTLKWTDSAVDYLTKVGYDPEFGARPVKRAIQHYVLNDLSKA 837


>gi|228919991|ref|ZP_04083345.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228839704|gb|EEM84991.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 866

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/306 (40%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAANEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|146301164|ref|YP_001195755.1| ATPase [Flavobacterium johnsoniae UW101]
 gi|146155582|gb|ABQ06436.1| ATPase AAA-2 domain protein [Flavobacterium johnsoniae UW101]
          Length = 867

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/301 (43%), Positives = 183/301 (60%), Gaps = 31/301 (10%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R+VGQE AI  +S A++R   G  D   P+  FLFLG++G+GKTELAK LA Y
Sbjct: 560 LEDELHKRVVGQEEAIEAVSDAVRRSRAGLQDMKKPVGSFLFLGTTGVGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++
Sbjct: 620 LF-DDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPD   +LLQ+ DEGRLTD KG+  + ++ I +MTSN+ SN I           E+F 
Sbjct: 679 KAHPDTFNILLQVLDEGRLTDNKGRLADFRNTIIIMTSNMGSNIIQ----------EKFE 728

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
               S+  +         +   K+ V+   L +   R EF+ RI+EIV F P +   +  
Sbjct: 729 NLKGSVEAA---------TEAAKNEVLG--LLKQTVRPEFINRIDEIVMFTPLTVENISR 777

Query: 501 LVCRELNFWAKK-ALDKHNINIVWDIDVETI--LAD-GYDVHYGARSIKHEVERQVVSQL 556
           +V  +L    K  AL      I  D   E I  LAD GYD H+GAR +K  V+R+V++QL
Sbjct: 778 IVSLQLKSVTKMLALQ----GITMDATPEAIAYLADKGYDPHFGARPVKRVVQREVLNQL 833

Query: 557 A 557
           +
Sbjct: 834 S 834


>gi|399026014|ref|ZP_10727984.1| ATP-dependent chaperone ClpB [Chryseobacterium sp. CF314]
 gi|398076983|gb|EJL68020.1| ATP-dependent chaperone ClpB [Chryseobacterium sp. CF314]
          Length = 864

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/307 (42%), Positives = 194/307 (63%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQ+ AI  ++ AI+R   G +D+  P+  FLFLG++G+GKT
Sbjct: 549 QSEREKLLHLETELHHRVVGQDEAIQAVADAIRRNRAGLSDEKKPIGSFLFLGTTGVGKT 608

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D+     R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 609 ELAKALAEFLFDDENN-MTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 667

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV   LLQ+ D+GRLTD KG+ +  K++I +MTSNL S     H +Q
Sbjct: 668 SVVLLDEIEKAHPDVFNTLLQVLDDGRLTDNKGRVVNFKNSIIIMTSNLGS-----HLIQ 722

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F   T         N DV +++  KD V   +LK+   R EFL RI+EIV F 
Sbjct: 723 -----ENFENITD-------ENQDVIVAKT-KDEVFD-LLKQTL-RPEFLNRIDEIVLFQ 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
           P  K E+  +V  +L  +    L K NI +    D V+ ++  GYD  +GAR +K  +++
Sbjct: 768 PLRKKEIGKIVQYQLRGF-NDMLAKRNIIMTATQDAVDYLMNKGYDPAFGARPLKRIIQQ 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNKLS 833


>gi|329942975|ref|ZP_08291749.1| ATPase associated with various cellular activities family protein
           [Chlamydophila psittaci Cal10]
 gi|332287558|ref|YP_004422459.1| chaperone protease clpB [Chlamydophila psittaci 6BC]
 gi|384450713|ref|YP_005663313.1| ATP-dependent Clp protease, subunit B [Chlamydophila psittaci 6BC]
 gi|384451709|ref|YP_005664307.1| chaperone protease clpB [Chlamydophila psittaci 01DC11]
 gi|384452683|ref|YP_005665280.1| chaperone protease clpB [Chlamydophila psittaci 08DC60]
 gi|384453662|ref|YP_005666258.1| chaperone protease clpB [Chlamydophila psittaci C19/98]
 gi|384454641|ref|YP_005667236.1| chaperone protease clpB [Chlamydophila psittaci 02DC15]
 gi|392376789|ref|YP_004064567.1| putative ClpB ATPase stress response protein [Chlamydophila
           psittaci RD1]
 gi|407454178|ref|YP_006733286.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci 84/55]
 gi|313848132|emb|CBY17133.1| putative ClpB ATPase stress response protein [Chlamydophila
           psittaci RD1]
 gi|325506688|gb|ADZ18326.1| chaperone protease clpB [Chlamydophila psittaci 6BC]
 gi|328814522|gb|EGF84512.1| ATPase associated with various cellular activities family protein
           [Chlamydophila psittaci Cal10]
 gi|328914807|gb|AEB55640.1| ATP-dependent Clp protease, subunit B [Chlamydophila psittaci 6BC]
 gi|334692443|gb|AEG85662.1| chaperone protease clpB [Chlamydophila psittaci C19/98]
 gi|334693419|gb|AEG86637.1| chaperone protease clpB [Chlamydophila psittaci 01DC11]
 gi|334694398|gb|AEG87615.1| chaperone protease clpB [Chlamydophila psittaci 02DC15]
 gi|334695372|gb|AEG88588.1| chaperone protease clpB [Chlamydophila psittaci 08DC60]
 gi|405780937|gb|AFS19687.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci 84/55]
          Length = 864

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADREVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G E SK      
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYC---AKKGSEVSK------ 738

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  D  +S      VV P L+++F   EF+ RI++I+ F+P S  ++  +V  ++ 
Sbjct: 739 -------DTVLS------VVAPTLRKYF-SPEFINRIDDILPFIPLSTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRMLERR-VTLTWDDSVILYLSEQGYDSAFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  SK+V
Sbjct: 844 PDTSIELTM--SKDV 856


>gi|410858573|ref|YP_006974513.1| putative ClpB ATPase stress response protein [Chlamydia psittaci
           01DC12]
 gi|410811468|emb|CCO02120.1| putative ClpB ATPase stress response protein [Chlamydia psittaci
           01DC12]
          Length = 864

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADREVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G E SK      
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYC---AKKGSEVSK------ 738

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  D  +S      VV P L+++F   EF+ RI++I+ F+P S  ++  +V  ++ 
Sbjct: 739 -------DTVLS------VVAPTLRKYF-SPEFINRIDDILPFIPLSTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRMLERR-VTLTWDDSVILYLSEQGYDSAFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  SK+V
Sbjct: 844 PDTSIELTM--SKDV 856


>gi|406593570|ref|YP_006740749.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci NJ1]
 gi|407458194|ref|YP_006736499.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci WS/RT/E30]
 gi|405784556|gb|AFS23302.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci WS/RT/E30]
 gi|405789442|gb|AFS28184.1| ATPase associated with various cellular activities family protein
           [Chlamydia psittaci NJ1]
          Length = 864

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADREVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G E SK      
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYC---AKKGSEVSK------ 738

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  D  +S      VV P L+++F   EF+ RI++I+ F+P S  ++  +V  ++ 
Sbjct: 739 -------DTVLS------VVAPTLRKYF-SPEFINRIDDILPFIPLSTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRMLERR-VTLTWDDSVILYLSEQGYDSAFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  SK+V
Sbjct: 844 PDTSIELTM--SKDV 856


>gi|340348958|ref|ZP_08671982.1| chaperone protein ClpB [Prevotella nigrescens ATCC 33563]
 gi|339612524|gb|EGQ17327.1| chaperone protein ClpB [Prevotella nigrescens ATCC 33563]
          Length = 862

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 181/300 (60%), Gaps = 24/300 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI+ ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEEELHKRVIGQDEAISAVANAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDET-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S  I Q          EF+
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSQYIQQ----------EFA 728

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
           K T +  +    N   T+    K  +          R EFL RI+E + FLP ++SE+  
Sbjct: 729 KLTDNNRQEIIDNARNTVMDMLKQTI----------RPEFLNRIDETIMFLPLTQSEIAQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  +L    +  L      + W D  V+ +   GYD  +GAR +K  ++  V++ L+ A
Sbjct: 779 IVTLQLK-RVEAMLAPQGFTLKWTDSAVDYLTKVGYDPEFGARPVKRAIQHYVLNDLSKA 837


>gi|218130541|ref|ZP_03459345.1| hypothetical protein BACEGG_02130 [Bacteroides eggerthii DSM 20697]
 gi|217986885|gb|EEC53216.1| ATP-dependent chaperone protein ClpB [Bacteroides eggerthii DSM
           20697]
          Length = 864

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/298 (39%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  +S A++R   G  D   P+  FLFLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQDEAIEAVSDAVRRSRAGLQDPKRPIGSFLFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSGYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  +    K+  V  +LK+   R EFL RI+E + FLP +++E+  
Sbjct: 727 -----MEKLNGSNKEEIVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTETEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + + + + D  ++ +   GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-SVQKMLSGNGVELELTDAAIDFLANAGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|423654046|ref|ZP_17629345.1| chaperone ClpB [Bacillus cereus VD200]
 gi|401296812|gb|EJS02427.1| chaperone ClpB [Bacillus cereus VD200]
          Length = 866

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++E++ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEVILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|317474140|ref|ZP_07933417.1| ATP-dependent chaperone ClpB [Bacteroides eggerthii 1_2_48FAA]
 gi|316909711|gb|EFV31388.1| ATP-dependent chaperone ClpB [Bacteroides eggerthii 1_2_48FAA]
          Length = 864

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/298 (39%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  +S A++R   G  D   P+  FLFLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQDEAIEAVSDAVRRSRAGLQDPKRPIGSFLFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSGYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  +    K+  V  +LK+   R EFL RI+E + FLP +++E+  
Sbjct: 727 -----MEKLNGSNKEEIVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTETEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + + + + D  ++ +   GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-SVQKMLSGNGVELELTDAAIDFLANAGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|37678899|ref|NP_933508.1| clpB protein [Vibrio vulnificus YJ016]
 gi|54035791|sp|Q7MNK1.1|CLPB_VIBVY RecName: Full=Chaperone protein ClpB
 gi|37197640|dbj|BAC93479.1| clpB protein [Vibrio vulnificus YJ016]
          Length = 857

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/307 (38%), Positives = 195/307 (63%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E+ L  R++GQ+ A+ +++ AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAM 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G                          K+ V++ ++ +HF R EFL R++E V F 
Sbjct: 732 LDYQG-------------------------IKEQVME-VVTKHF-RPEFLNRVDETVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P S+  + ++   +LN  A + +++H   + V D  +E I   G+D  YGAR +K  +++
Sbjct: 765 PLSQDHIKSIAAIQLNRLANR-MEEHGYQLEVSDKALELIAQVGFDPVYGARPLKRAIQQ 823

Query: 551 QVVSQLA 557
            + + LA
Sbjct: 824 SIENPLA 830


>gi|159186054|ref|NP_356471.2| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
           fabrum str. C58]
 gi|54035788|sp|Q7CU92.2|CLPB_AGRT5 RecName: Full=Chaperone protein ClpB
 gi|159141188|gb|AAK89256.2| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
           fabrum str. C58]
          Length = 874

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/431 (35%), Positives = 226/431 (52%), Gaps = 53/431 (12%)

Query: 154 TVHRTAAEKKMNPFEVLLKREDEFNDVL---NPNMTFLGFSALHYGVVAGNTEVVELLLK 210
           T    A ++K+     L KR DE  + L     N  F     L YG++ G       L K
Sbjct: 460 TARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPG-------LEK 512

Query: 211 SGADPTVKDNSG--HIPSDYAEDANIKQILQKYA----EKYADLQREKEAEERRKYPLEQ 264
             A    +D+SG   +  +     NI  ++ ++     +K  + QREK         +E 
Sbjct: 513 ELAAAEARDSSGAGSMVQEVVTPDNIAHVVSRWTGIPVDKMLEGQREK------LLRMED 566

Query: 265 RLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHR 323
            L   +VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  
Sbjct: 567 ELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLF- 625

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D + A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P  VVLFDE++KAH
Sbjct: 626 DDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAH 685

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDV  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSNL S  + Q                
Sbjct: 686 PDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQ---------------- 729

Query: 444 PSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVC 503
                  G N DV   R      V   ++ HF R EFL RI++I+ F    + E+  +V 
Sbjct: 730 ------MGDNDDVDSVREL----VMERVRSHF-RPEFLNRIDDIILFHRLRRDEMGAIVE 778

Query: 504 RELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            +L        D+  I +  D D  + LA+ GYD  YGAR +K  +++ V  +LA     
Sbjct: 779 IQLKRLVSLLADR-KITLELDEDARSWLANKGYDPAYGARPLKRVIQKSVQDRLAEMILG 837

Query: 563 SVIGKGSFVRL 573
             I  GS V++
Sbjct: 838 GEIPDGSRVKV 848


>gi|424825258|ref|ZP_18250245.1| putative ClpB ATPase stress response protein [Chlamydophila abortus
           LLG]
 gi|333410357|gb|EGK69344.1| putative ClpB ATPase stress response protein [Chlamydophila abortus
           LLG]
          Length = 864

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 196/307 (63%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI+ +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAISAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADREVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G E SK T    
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYC---AKKGSEVSKET---- 740

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                     +S      VV P L+++F   EF+ RI++I+ F+P S  ++  +V  ++ 
Sbjct: 741 ---------VLS------VVSPTLRKYF-SPEFINRIDDILPFIPLSTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRMLERR-VTLTWDDSVILYLSEQGYDSAFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRL 573
             + + L
Sbjct: 844 ADTSIEL 850


>gi|229016522|ref|ZP_04173463.1| Chaperone protein clpB 1 [Bacillus cereus AH1273]
 gi|229022730|ref|ZP_04179254.1| Chaperone protein clpB 1 [Bacillus cereus AH1272]
 gi|228738542|gb|EEL89014.1| Chaperone protein clpB 1 [Bacillus cereus AH1272]
 gi|228744789|gb|EEL94850.1| Chaperone protein clpB 1 [Bacillus cereus AH1273]
          Length = 866

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ V+   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRERVMGQ-LRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|423420779|ref|ZP_17397868.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
 gi|401100489|gb|EJQ08483.1| chaperone ClpB [Bacillus cereus BAG3X2-1]
          Length = 866

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L+
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLLE 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             KE     + +  +   Q                    L+ HF R EFL R++EI+ F 
Sbjct: 734 GLKEDGSIKEESRELVMGQ--------------------LRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|398822258|ref|ZP_10580643.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. YR681]
 gi|398227082|gb|EJN13319.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. YR681]
          Length = 879

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/354 (37%), Positives = 205/354 (57%), Gaps = 37/354 (10%)

Query: 208 LLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLK 267
           L K  AD   K+NSG +  +     +I Q++ ++     D  +  E E+ +   +E++L 
Sbjct: 511 LEKQLADIEAKENSGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLKMEEQLG 568

Query: 268 DRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKK 326
            R+VGQ  A+  ++ A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+ 
Sbjct: 569 TRVVGQAEAVRAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDET 628

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
            A +RLDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV
Sbjct: 629 -AMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDV 687

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
             VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S      
Sbjct: 688 FNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQ-----PEGEDTSA----- 737

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
                           ++ V+  +++ HF R EFL R++EI+ F    +SE+  +V  + 
Sbjct: 738 ---------------VREQVMG-MVRGHF-RPEFLNRVDEIILFHRLQRSEMGRIVEIQF 780

Query: 507 NFWAKKALDKHNINIVWDIDV---ETILADGYDVHYGARSIKHEVERQVVSQLA 557
               K   D+    IV  +D    + + A G+D  YGAR +K  ++R V   LA
Sbjct: 781 ARLQKLLADR---KIVLTLDAAGRDWLAAKGWDPAYGARPLKRVIQRYVQDPLA 831


>gi|389866755|ref|YP_006368996.1| protein disaggregation chaperone [Modestobacter marinus]
 gi|388488959|emb|CCH90537.1| Protein disaggregation chaperone [Modestobacter marinus]
          Length = 888

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/368 (35%), Positives = 208/368 (56%), Gaps = 35/368 (9%)

Query: 233 NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWT 292
           +I +++Q +    A   R  E E ++   +E+ L  R+VGQ  A+  +S A++R  +G +
Sbjct: 537 DIAEVVQAWTGIPAG--RLLEGETQKLLRMEEELGKRVVGQPDAVRAVSDAVRRARSGVS 594

Query: 293 DDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
           D D P   FLFLG +G+GKTELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPP
Sbjct: 595 DPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDER-AMVRIDMSEYSEKHSVARLVGAPP 653

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+G++ GGQLT+ +++ P  VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++
Sbjct: 654 GYVGYEAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRN 713

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPIL 471
            I V+TSNL S  IA                            D ++    ++  VQ I+
Sbjct: 714 VILVLTSNLGSQVIA----------------------------DQSVPEEQRNRAVQDIV 745

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL 531
           + HF + EFL R++++V F      EL  +V  ++   A++   +     V D   + + 
Sbjct: 746 RAHF-KPEFLNRLDDVVTFRALGSEELAGIVDIQVRVLARRLAARRLTLTVTDSARDWLA 804

Query: 532 ADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGII 591
            +G+D  YGAR ++  V+  +  QLA A     +  G  V   V W  +V+    +  + 
Sbjct: 805 LNGFDPVYGARPLRRLVQSAIGDQLARALLSGEVRDGDQV--LVDWPGDVTTGDGQLSVT 862

Query: 592 KLKVKKKG 599
           +++    G
Sbjct: 863 RVEPAGAG 870


>gi|167539748|ref|XP_001741332.1| heat shock protein [Entamoeba dispar SAW760]
 gi|165894033|gb|EDR22117.1| heat shock protein, putative [Entamoeba dispar SAW760]
          Length = 866

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/316 (39%), Positives = 192/316 (60%), Gaps = 33/316 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E+ R   LE+ L  R++GQ  A+  +S AI R   G  ++  P   F+FLG SG+GKT
Sbjct: 555 QTEKIRLMKLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D ++  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAVELF-DDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ I +MTSNL S  I      
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIM----- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   +  +SR  K+ V++ I+K+ F + EFL R+++I+ F 
Sbjct: 729 ------------------KGVETEGQVSRKVKETVME-IVKKTF-KPEFLNRLDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID--VETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++ ++ V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVI 565
           + VV+ +     KS+I
Sbjct: 829 KTVVTSIT----KSII 840


>gi|157412565|ref|YP_001483431.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
           ClpB [Prochlorococcus marinus str. MIT 9215]
 gi|157387140|gb|ABV49845.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
           ClpB [Prochlorococcus marinus str. MIT 9215]
          Length = 918

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/308 (43%), Positives = 193/308 (62%), Gaps = 23/308 (7%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + ER+K   LE+ L ++++GQE AI  +SAAI+R   G      P+  FLF+G +G+GKT
Sbjct: 601 SNERKKLVNLEKELSEKVIGQEKAIETVSAAIRRARVGMKSPKRPIGSFLFMGPTGVGKT 660

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+++A +RLDMSEY EK+ VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 661 ELAKSLATALF-DEEDALLRLDMSEYMEKNAVARLLGAPPGYIGYEEGGQLTEAVRRKPY 719

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH +V  +LLQ+ DEGRLTD +G+T++ K+ + +MTSNLA          
Sbjct: 720 SVILLDEIEKAHTEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLA---------- 769

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G+   +R+  ISKSQ   LD    + F D  +  IL   F R EFL RI+E+V F 
Sbjct: 770 ----GKSILERSQKISKSQ-EFLDKD-QQTFNDS-INNILSSFF-RPEFLNRIDEVVKFD 821

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVER 550
           P S +EL  ++  +     K  L +  INI  D  V   I  D Y+  YGAR +  E+ R
Sbjct: 822 PLSINELQKIIILQTEDL-KNLLLEQKINIAIDKKVINKIANDSYEPEYGARPLSRELRR 880

Query: 551 QVVSQLAA 558
           Q+ + LAA
Sbjct: 881 QIENPLAA 888


>gi|419925000|ref|ZP_14442860.1| ATPase AAA-2 [Escherichia coli 541-15]
 gi|388388188|gb|EIL49780.1| ATPase AAA-2 [Escherichia coli 541-15]
          Length = 949

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 195/317 (61%), Gaps = 27/317 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  + D P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGDKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHAVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I +     
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKAG 777

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
              GEE+ K     +KS+                V  +L+ HF R EF+ RI+EI+ F  
Sbjct: 778 GAAGEEYEK-----TKSE----------------VMDVLRGHF-RPEFINRIDEIIVFHA 815

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  +
Sbjct: 816 LGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSE 874

Query: 552 VVSQLAAAHEKSVIGKG 568
           + + LA       IGKG
Sbjct: 875 LETALAREMLGGGIGKG 891


>gi|309780955|ref|ZP_07675694.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
           5_7_47FAA]
 gi|330824649|ref|YP_004387952.1| ATPase AAA-2 domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|404394131|ref|ZP_10985935.1| hypothetical protein HMPREF0989_02542 [Ralstonia sp. 5_2_56FAA]
 gi|57282291|emb|CAD32531.1| putative clp protease [uncultured bacterium]
 gi|308920258|gb|EFP65916.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
           5_7_47FAA]
 gi|329310021|gb|AEB84436.1| ATPase AAA-2 domain protein [Alicycliphilus denitrificans K601]
 gi|348614517|gb|EGY64064.1| hypothetical protein HMPREF0989_02542 [Ralstonia sp. 5_2_56FAA]
          Length = 949

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 198/318 (62%), Gaps = 33/318 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+        K++G  +DV              L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEY-------EKTKGEVMDV--------------LRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K    R
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLAFDQTLIDHFAEEGYKPEFGARELK----R 869

Query: 551 QVVSQLAAAHEKSVIGKG 568
            + S+L  A  + ++G G
Sbjct: 870 LIRSELETALAREMLGGG 887


>gi|228964216|ref|ZP_04125338.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|402561741|ref|YP_006604465.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis HD-771]
 gi|228795467|gb|EEM42952.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|401790393|gb|AFQ16432.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis HD-771]
          Length = 866

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|407002513|gb|EKE19242.1| hypothetical protein ACD_9C00073G0003 [uncultured bacterium]
          Length = 871

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/331 (38%), Positives = 201/331 (60%), Gaps = 21/331 (6%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E  +   +E+ L  R+V Q+ AIN +S AI+R   G ++++ P+  F+FLG +G+GKT
Sbjct: 557 ESELEKLVDMEKELGKRVVSQDEAINAVSNAIRRSRAGISEENRPIGSFIFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D K + IRLDMSEY E H  AK+IG+PPGY+G+++GGQLT+ +++ P 
Sbjct: 617 ELAKTLAEFLFNDPK-SMIRLDMSEYMESHSTAKMIGSPPGYVGYEEGGQLTEMVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  +LLQ+ ++GRLTD KG+ +  K+++ VMTSN+ S+ I +    
Sbjct: 676 SVILFDEIEKAHPQVFNILLQILEDGRLTDAKGRIVNFKNSVIVMTSNVGSDIIYKM--- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F          QG   +  ++       VQ  L+ +F + EFL RI+E++ F 
Sbjct: 733 -----ETFG--------FQGEPREDIVNEKDMRAKVQASLRENF-KPEFLNRIDELIIFH 778

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P  K  L  +   +LN   K+ LD+ NI +    DV+  L   GYD  YGAR +K  ++ 
Sbjct: 779 PLDKKALQQVANLQLNLVQKR-LDEKNIKLRVSNDVKAYLTQKGYDPTYGARPLKRIIQN 837

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           +++ +LA    +  I  G  V++ ++ +K V
Sbjct: 838 EILDELALEIIEKKIQDGDTVKVQLENNKIV 868


>gi|329890890|ref|ZP_08269233.1| ATP-dependent chaperone ClpB [Brevundimonas diminuta ATCC 11568]
 gi|328846191|gb|EGF95755.1| ATP-dependent chaperone ClpB [Brevundimonas diminuta ATCC 11568]
          Length = 861

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 186/321 (57%), Gaps = 31/321 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ+ A+  +S A++R   G  D + PL  FLFLG +G+GKT
Sbjct: 553 EGEREKLLKMEEELGRRVVGQDEALAAVSDAVRRARAGLNDPNKPLGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA Y+  D   A  R+DMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 613 ELTKALAGYLF-DDDNAITRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+TI+ K+ + +MTSNL S  +A     
Sbjct: 672 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTIDFKNTLIIMTSNLGSQFLADQ--- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              EGE+     P                     +V   ++ HF R EFL RI+EI+ F 
Sbjct: 729 --PEGEDVEAVRP---------------------LVMEQVRAHF-RPEFLNRIDEIILFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              + ++  +V  +L    K   D+  + +  D    T LAD GYD  YGAR +K  +++
Sbjct: 765 RLGREQMGGIVRIQLARLEKLMADRR-LTLALDDSALTWLADKGYDPVYGARPLKRVIQK 823

Query: 551 QVVSQLAAAHEKSVIGKGSFV 571
           ++V  +A       I  GS V
Sbjct: 824 ELVDPMAKKLLAGEIEDGSVV 844


>gi|404373223|ref|ZP_10978494.1| hypothetical protein ESCG_01087 [Escherichia sp. 1_1_43]
 gi|226840427|gb|EEH72429.1| hypothetical protein ESCG_01087 [Escherichia sp. 1_1_43]
          Length = 949

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 199/318 (62%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R+  GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 REAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  + ++ + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARSAASQ-DVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|218896206|ref|YP_002444617.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus G9842]
 gi|228899853|ref|ZP_04064098.1| Chaperone protein clpB 1 [Bacillus thuringiensis IBL 4222]
 gi|228906906|ref|ZP_04070773.1| Chaperone protein clpB 1 [Bacillus thuringiensis IBL 200]
 gi|423361240|ref|ZP_17338742.1| chaperone ClpB [Bacillus cereus VD022]
 gi|434374216|ref|YP_006608860.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis HD-789]
 gi|218542688|gb|ACK95082.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus G9842]
 gi|228852654|gb|EEM97441.1| Chaperone protein clpB 1 [Bacillus thuringiensis IBL 200]
 gi|228859757|gb|EEN04172.1| Chaperone protein clpB 1 [Bacillus thuringiensis IBL 4222]
 gi|401080345|gb|EJP88634.1| chaperone ClpB [Bacillus cereus VD022]
 gi|401872773|gb|AFQ24940.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis HD-789]
          Length = 866

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|449071268|ref|YP_007438348.1| putative ClpB ATPase stress response protein [Chlamydophila
           psittaci Mat116]
 gi|449039776|gb|AGE75200.1| putative ClpB ATPase stress response protein [Chlamydophila
           psittaci Mat116]
          Length = 864

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADREVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G E SK      
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSEELADYC---AKKGSEVSK------ 738

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  D  +S      VV P L+++F   EF+ RI++I+ F+P S  ++  +V  ++ 
Sbjct: 739 -------DTVLS------VVAPTLRKYF-SPEFINRIDDILPFIPLSTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRMLERR-VTLTWDDSVILYLSEQGYDSAFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  SK+V
Sbjct: 844 PDTSIELTM--SKDV 856


>gi|62185213|ref|YP_219998.1| ClpB ATPase stress response protein [Chlamydophila abortus S26/3]
 gi|62148280|emb|CAH64046.1| putative ClpB ATPase stress response protein [Chlamydophila abortus
           S26/3]
          Length = 864

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 196/307 (63%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI+ +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAISAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADREVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G E SK T    
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYC---AKKGSEVSKET---- 740

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                     +S      VV P L+++F   EF+ RI++I+ F+P S  ++  +V  ++ 
Sbjct: 741 ---------VLS------VVSPTLRKYF-SPEFINRIDDILPFIPLSTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRMLERR-VTLTWDDSVILYLSEQGYDSAFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRL 573
             + + L
Sbjct: 844 ADTSIEL 850


>gi|16752900|ref|NP_445171.1| ATP-dependent Clp protease subunit B [Chlamydophila pneumoniae
           AR39]
 gi|7189542|gb|AAF38444.1| ATP-dependent Clp protease, subunit B [Chlamydophila pneumoniae
           AR39]
          Length = 872

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  A++ +S +I+    G  D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 575 RVVGQPFAVSAVSDSIRAARVGLNDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 633

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DMSEY EKH ++KLIG+ PGY+G+++GG L++ L++ P +VVLFDE++KA  +VL
Sbjct: 634 AMVRFDMSEYMEKHSISKLIGSSPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVL 693

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FD+G LTDGK + + CK+A+F+MTSN+ S E+A +     K+G E +K      
Sbjct: 694 NILLQVFDDGILTDGKKRKVNCKNALFIMTSNIGSPELADYC---SKKGSELTK------ 744

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  +  +S      VV P+LKR+    EF+ RI+EI+ F+P +K ++  +V  ++ 
Sbjct: 745 -------EAILS------VVSPVLKRYL-SPEFMNRIDEILPFVPLTKEDIVKIVGIQMR 790

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L    IN+ WD  V   L++ GYD  +GAR +K  ++++VV  L+ A  K  I 
Sbjct: 791 RIAQR-LKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKGDIK 849

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  +KEV
Sbjct: 850 PDTSIELTM--AKEV 862


>gi|15618068|ref|NP_224352.1| Clp protease ATPase [Chlamydophila pneumoniae CWL029]
 gi|15835679|ref|NP_300203.1| Clp protease ATPase [Chlamydophila pneumoniae J138]
 gi|384449591|ref|YP_005662193.1| chaperone ClpB [Chlamydophila pneumoniae LPCoLN]
 gi|54035783|sp|Q7AJA9.1|CLPB_CHLPN RecName: Full=Chaperone protein ClpB
 gi|4376410|gb|AAD18297.1| Clp Protease ATPase [Chlamydophila pneumoniae CWL029]
 gi|8978517|dbj|BAA98354.1| Clp protease ATPase [Chlamydophila pneumoniae J138]
 gi|269303025|gb|ACZ33125.1| chaperone ClpB [Chlamydophila pneumoniae LPCoLN]
          Length = 866

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  A++ +S +I+    G  D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAVSAVSDSIRAARVGLNDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DMSEY EKH ++KLIG+ PGY+G+++GG L++ L++ P +VVLFDE++KA  +VL
Sbjct: 628 AMVRFDMSEYMEKHSISKLIGSSPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVL 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FD+G LTDGK + + CK+A+F+MTSN+ S E+A +     K+G E +K      
Sbjct: 688 NILLQVFDDGILTDGKKRKVNCKNALFIMTSNIGSPELADYC---SKKGSELTK------ 738

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  +  +S      VV P+LKR+    EF+ RI+EI+ F+P +K ++  +V  ++ 
Sbjct: 739 -------EAILS------VVSPVLKRYL-SPEFMNRIDEILPFVPLTKEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L    IN+ WD  V   L++ GYD  +GAR +K  ++++VV  L+ A  K  I 
Sbjct: 785 RIAQR-LKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKGDIK 843

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  +KEV
Sbjct: 844 PDTSIELTM--AKEV 856


>gi|254526796|ref|ZP_05138848.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
 gi|221538220|gb|EEE40673.1| ATPase, AAA family [Prochlorococcus marinus str. MIT 9202]
          Length = 918

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/308 (40%), Positives = 190/308 (61%), Gaps = 23/308 (7%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + ER+K   LE+ L ++++GQE AI  +SAAI+R   G      P+  FLF+G +G+GKT
Sbjct: 601 SNERKKLVNLEKELSEKVIGQEKAIETVSAAIRRARVGMKSPKRPIGSFLFMGPTGVGKT 660

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+++A +RLDMSEY EK+ VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 661 ELAKSLATALF-DEEDALLRLDMSEYMEKNAVARLLGAPPGYIGYEEGGQLTEAVRRKPY 719

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH +V  +LLQ+ DEGRLTD +G+T++ K+ + +MTSNLA   I +++ +
Sbjct: 720 SVILLDEIEKAHTEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKSILEYSQK 779

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           + K  E   K   + + S                 +  +L   F R EFL RI+E+V F 
Sbjct: 780 ISKSQEILDKDQQTFNDS-----------------INNVLSSFF-RPEFLNRIDEVVKFD 821

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVER 550
           P S +EL  ++  +     K  L +  INI  D  V   I  D Y+  YGAR +  E+ R
Sbjct: 822 PLSINELQKIIILQTEDL-KNLLLEQKINIAIDKKVINKIANDSYEPEYGARPLSRELRR 880

Query: 551 QVVSQLAA 558
           Q+ + LAA
Sbjct: 881 QIENPLAA 888


>gi|154252203|ref|YP_001413027.1| ATPase [Parvibaculum lavamentivorans DS-1]
 gi|154156153|gb|ABS63370.1| ATPase AAA-2 domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 880

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/369 (37%), Positives = 209/369 (56%), Gaps = 40/369 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YG++ G       L K   +   ++ +G +  +   + +I Q++ ++     D   
Sbjct: 501 SELAYGIIPG-------LEKKLGETEKREEAGAMLEEAVTEQHIAQVVSRWTGIPVDKML 553

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
           E E E  +   +E+ L  RIVGQ  A++ +S A++R   G  D + P+  FLFLG +G+G
Sbjct: 554 EGERE--KLIGMEKALGARIVGQAEAVSAVSRAVRRARAGLQDPNRPIGSFLFLGPTGVG 611

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL K LA ++  D  +A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ 
Sbjct: 612 KTELTKALAEFLF-DDDQAIVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRR 670

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL +  +A+  
Sbjct: 671 PYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVLIIMTSNLGAEYLAEQ- 729

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
               K GE+       +       +DV  SR                R EFL R++EI+ 
Sbjct: 730 ----KAGEDVEAVREQV-------MDVVRSRF---------------RPEFLNRLDEILL 763

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F   ++ ++ T+V  ++    +  L    I I  D    T LAD GYD  YGAR +K  +
Sbjct: 764 FHRLTREQMDTIVDIQMGRL-RSLLKDRKIEIELDDTARTWLADQGYDPVYGARPLKRVI 822

Query: 549 ERQVVSQLA 557
           +R +   LA
Sbjct: 823 QRNLQDPLA 831


>gi|374624074|ref|ZP_09696555.1| ATPase with chaperone activity [Ectothiorhodospira sp. PHS-1]
 gi|373943156|gb|EHQ53701.1| ATPase with chaperone activity [Ectothiorhodospira sp. PHS-1]
          Length = 923

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/327 (40%), Positives = 200/327 (61%), Gaps = 31/327 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 573 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 632

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 633 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 691

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 692 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 750

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EFL RI EI+ F 
Sbjct: 751 RGAAGEEYEK-----TKTE----------------VMDVLRGHF-RPEFLNRIEEIIVFH 788

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR++K  +  
Sbjct: 789 ALGKEEISHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARALKRVIRS 847

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQW 577
           ++ + LA       IGKG  V    +W
Sbjct: 848 ELETALAREMLGGGIGKGDHV--IARW 872


>gi|33241480|ref|NP_876421.1| ClpB [Chlamydophila pneumoniae TW-183]
 gi|33235988|gb|AAP98078.1| ClpB [Chlamydophila pneumoniae TW-183]
          Length = 869

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  A++ +S +I+    G  D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 572 RVVGQPFAVSAVSDSIRAARVGLNDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 630

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DMSEY EKH ++KLIG+ PGY+G+++GG L++ L++ P +VVLFDE++KA  +VL
Sbjct: 631 AMVRFDMSEYMEKHSISKLIGSSPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVL 690

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FD+G LTDGK + + CK+A+F+MTSN+ S E+A +     K+G E +K      
Sbjct: 691 NILLQVFDDGILTDGKKRKVNCKNALFIMTSNIGSPELADYC---SKKGSELTK------ 741

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  +  +S      VV P+LKR+    EF+ RI+EI+ F+P +K ++  +V  ++ 
Sbjct: 742 -------EAILS------VVSPVLKRYL-SPEFMNRIDEILPFVPLTKEDIVKIVGIQMR 787

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L    IN+ WD  V   L++ GYD  +GAR +K  ++++VV  L+ A  K  I 
Sbjct: 788 RIAQR-LKARRINLSWDDSVILFLSEQGYDSAFGARPLKRLIQQKVVILLSKALLKGDIK 846

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  +KEV
Sbjct: 847 PDTSIELTM--AKEV 859


>gi|126695565|ref|YP_001090451.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
           [Prochlorococcus marinus str. MIT 9301]
 gi|126542608|gb|ABO16850.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
           ClpB [Prochlorococcus marinus str. MIT 9301]
          Length = 918

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/308 (41%), Positives = 189/308 (61%), Gaps = 23/308 (7%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + ER+K   LE  L ++++GQE AI  +SAAI+R   G      P+  FLF+G +G+GKT
Sbjct: 601 SNERKKLVNLETELSEKVIGQEKAIEAVSAAIRRARVGMKSPKRPIGSFLFMGPTGVGKT 660

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+++A +RLDMSEY EK+ VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 661 ELAKSLATALF-DEEDALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQLTEAVRRKPY 719

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH +V  +LLQ+ DEGRLTD +G+T++ K+ + +MTSNLA   I +++  
Sbjct: 720 SVILLDEIEKAHSEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKSILEYS-- 777

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                ++ S+    + K Q  NLD +IS                 R EFL RI+E+V F 
Sbjct: 778 -----QKISRSDGKLEKDQ-QNLDDSISNTLS----------SIFRPEFLNRIDEVVKFN 821

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVER 550
           P S  EL  ++  +     K  L +  INI  D  V   I  D Y+  YGAR +  E+ R
Sbjct: 822 PLSIDELQKIIILQTEDL-KNLLLEQKINIAIDKKVINKIANDSYEPEYGARPLSRELRR 880

Query: 551 QVVSQLAA 558
           Q+ + LAA
Sbjct: 881 QIENPLAA 888


>gi|418291696|ref|ZP_12903665.1| ATPase AAA-2 domain-containing protein [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
 gi|379063148|gb|EHY75891.1| ATPase AAA-2 domain-containing protein [Pseudomonas stutzeri ATCC
           14405 = CCUG 16156]
          Length = 949

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 198/318 (62%), Gaps = 33/318 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGGKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+        K++G  +DV              L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEY-------EKTKGEVMDV--------------LRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K    R
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELK----R 869

Query: 551 QVVSQLAAAHEKSVIGKG 568
            + S+L  A  + ++G G
Sbjct: 870 LIRSELETALAREMLGGG 887


>gi|329955552|ref|ZP_08296460.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056]
 gi|328525955|gb|EGF52979.1| ATP-dependent chaperone protein ClpB [Bacteroides clarus YIT 12056]
          Length = 864

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 119/298 (39%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  FLFLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFLFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSGYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  +    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLNGSNKEEIVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + + +V  D  ++ +   GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-SVQKMLSANGVELVLTDAAIDFLANAGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|386021033|ref|YP_005939057.1| putative ATPase with chaperone activity, clpB [Pseudomonas stutzeri
           DSM 4166]
 gi|327481005|gb|AEA84315.1| putative ATPase with chaperone activity, clpB [Pseudomonas stutzeri
           DSM 4166]
          Length = 949

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 197/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +KS+                V  +L+ HF R EF+ RI+EI+ F 
Sbjct: 777 RSAAGEEYEK-----TKSE----------------VMDVLRGHF-RPEFINRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|167762587|ref|ZP_02434714.1| hypothetical protein BACSTE_00943 [Bacteroides stercoris ATCC
           43183]
 gi|167699693|gb|EDS16272.1| ATP-dependent chaperone protein ClpB [Bacteroides stercoris ATCC
           43183]
          Length = 864

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 189/312 (60%), Gaps = 28/312 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           LQ EKE    +   LE  L  R++GQ  AI  ++ A++R   G  D   P+  FLFLG++
Sbjct: 550 LQSEKE----KLLHLEDELHQRVIGQNEAIEAVADAVRRSRAGLQDPKRPIGSFLFLGTT 605

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA ++  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +
Sbjct: 606 GVGKTELAKALAEFLF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAV 664

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S  I 
Sbjct: 665 RRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSGYIQ 724

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                              + K  GSN +  +    K+  V  +LK+   R EFL RI+E
Sbjct: 725 SQ-----------------MEKLNGSNKEEIVEETKKE--VMNMLKKTI-RPEFLNRIDE 764

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIK 545
            + FLP ++ E+  +V  ++    +K L  + + +V  D  ++ +   GYD  +GAR +K
Sbjct: 765 TIMFLPLTEKEIKQIVVLQIK-SVQKMLSGNGVELVLTDAAIDFLANAGYDPEFGARPVK 823

Query: 546 HEVERQVVSQLA 557
             ++  +++ L+
Sbjct: 824 RAIQHYLLNDLS 835


>gi|119509203|ref|ZP_01628353.1| ATPase [Nodularia spumigena CCY9414]
 gi|119466045|gb|EAW46932.1| ATPase [Nodularia spumigena CCY9414]
          Length = 872

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/330 (37%), Positives = 202/330 (61%), Gaps = 30/330 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + +  E+E+ +   LE  L +R++GQ  A+  ++ AI+R   G
Sbjct: 539 EADIAEIISKWTR--IPISKLVESEKEKLLHLEDELHNRVIGQAEAVTAVADAIQRSRAG 596

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  F+FLG +G+GKTELAK LA Y+  D +E+ +R+DMSEY EKH V++LIGA
Sbjct: 597 LADPNRPIASFIFLGPTGVGKTELAKALAAYMF-DTEESLVRIDMSEYMEKHAVSRLIGA 655

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P AV+LFDE++KAH DV  +LLQ+ D+GR+TD +G+T++ 
Sbjct: 656 PPGYVGYEEGGQLTEVIRRRPYAVILFDEIEKAHADVFNILLQILDDGRVTDSQGRTVDF 715

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+AI +MTSN+ S    Q+ L +  E E + +                     +  V++ 
Sbjct: 716 KNAIIIMTSNIGS----QYILDVAGEAEHYDE--------------------MRRRVMEA 751

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +  R+  R EFL RI+EI+ F    K EL  +V  ++    ++  D+     + D  ++ 
Sbjct: 752 M--RNSFRPEFLNRIDEIIIFHGLDKKELRQIVLLQVERLRERLSDRKMSLKLSDSSLDF 809

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAA 559
           +   GYD  YGAR +K  ++R++ +Q+A A
Sbjct: 810 LAEVGYDPVYGARPLKRAIQRELETQIAKA 839


>gi|423564445|ref|ZP_17540721.1| chaperone ClpB [Bacillus cereus MSX-A1]
 gi|401196578|gb|EJR03518.1| chaperone ClpB [Bacillus cereus MSX-A1]
          Length = 875

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|325298028|ref|YP_004257945.1| ATP-dependent chaperone ClpB [Bacteroides salanitronis DSM 18170]
 gi|324317581|gb|ADY35472.1| ATP-dependent chaperone ClpB [Bacteroides salanitronis DSM 18170]
          Length = 862

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/297 (41%), Positives = 179/297 (60%), Gaps = 22/297 (7%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDESLMTRIDMSEYQEKHTVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                  K    N D  +    K+  V  +LK+   R EFL RI+EI+ F P  K ++  
Sbjct: 727 -----FEKINDQNHDQIVEDTKKE--VMEMLKKTI-RPEFLNRIDEIIMFQPLDKDQIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++N   K   D      + D  VE +   G+D  +GAR +K  ++R +++ L+
Sbjct: 779 IVRLQINGIQKMLADNGVTLQMTDEAVEFLATAGFDPEFGARPVKRAIQRYLLNDLS 835


>gi|429770225|ref|ZP_19302298.1| ATP-dependent chaperone protein ClpB [Brevundimonas diminuta 470-4]
 gi|429185062|gb|EKY26052.1| ATP-dependent chaperone protein ClpB [Brevundimonas diminuta 470-4]
          Length = 861

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 185/321 (57%), Gaps = 31/321 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L  R+VGQ+ A+  +S A++R   G  D + PL  FLFLG +G+GKT
Sbjct: 553 EGEREKLLKMEDELGRRVVGQDEALAAVSDAVRRARAGLNDPNKPLGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA Y+  D   A  R+DMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 613 ELTKALAGYLF-DDDNAITRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+TI+ K+ + +MTSNL S  +A     
Sbjct: 672 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTIDFKNTLIIMTSNLGSQYLADQ--- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              EGE+     P                     +V   ++ HF R EFL RI+EI+ F 
Sbjct: 729 --PEGEDVEAVRP---------------------LVMEQVRAHF-RPEFLNRIDEIILFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              + ++  +V  +L    K   D+  + +  D    T LAD GYD  YGAR +K  +++
Sbjct: 765 RLGREQMGGIVRIQLARLEKLMADRR-LTLALDDSALTWLADKGYDSVYGARPLKRVIQK 823

Query: 551 QVVSQLAAAHEKSVIGKGSFV 571
           ++V  +A       I  GS V
Sbjct: 824 ELVDPMAKKLLAGEIEDGSVV 844


>gi|257057792|ref|YP_003135624.1| ATP-dependent chaperone ClpB [Saccharomonospora viridis DSM 43017]
 gi|256587664|gb|ACU98797.1| ATP-dependent chaperone ClpB [Saccharomonospora viridis DSM 43017]
          Length = 873

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 187/327 (57%), Gaps = 31/327 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+ ++S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 564 EGETGKLLRMEEELGKRVVGQSDAVKVVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKT 623

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 624 ELAKALAEFLFDDER-AMLRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 682

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA     
Sbjct: 683 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQVIA----- 737

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                  D T+S   +   V  ++++HF + EFL R+++IV F 
Sbjct: 738 -----------------------DPTLSEQQRKDSVMSVVQQHF-KPEFLNRLDDIVVFH 773

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
                 L  +V  ++   AK+   +     V     E +  +GYD  YGAR ++  V+  
Sbjct: 774 ALDTEHLGAIVDIQVGRLAKRLAQRRLTLDVTPAAREWLAMNGYDPIYGARPLRRLVQSA 833

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           +  +LA       I  G  VR+ V  S
Sbjct: 834 IGDELAKKLLAGEIKDGDTVRVDVPES 860


>gi|308827063|emb|CBX33349.1| putative ATPase with chaperone activity, clpB [Cronobacter
           sakazakii]
          Length = 949

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 198/318 (62%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R+  GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 REAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|410097352|ref|ZP_11292333.1| chaperone ClpB [Parabacteroides goldsteinii CL02T12C30]
 gi|409223442|gb|EKN16377.1| chaperone ClpB [Parabacteroides goldsteinii CL02T12C30]
          Length = 862

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 192/307 (62%), Gaps = 28/307 (9%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI+ I+ A++R   G  D   P+  F+FLG++G+GKTELAK LA Y
Sbjct: 560 LEDELHTRVIGQDEAISAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I           E F 
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSLIR----------ESFE 728

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
           K TP    ++   +D T  +      V  +LK++  R EFL RI+EI+ F P ++ E+  
Sbjct: 729 KITPD---NREKVIDETRIQ------VLELLKKNI-RPEFLNRIDEIIMFTPLNEEEIRK 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  +LN   KK L  + I + + D  ++ I   GYD  +GAR +K  +++ V+++L+  
Sbjct: 779 IVTLQLN-GVKKMLANNGIALNFTDAALDFISDAGYDSQFGARPVKRAIQKYVLNELS-- 835

Query: 560 HEKSVIG 566
             K ++G
Sbjct: 836 --KEILG 840


>gi|320354684|ref|YP_004196023.1| ATP-dependent chaperone ClpB [Desulfobulbus propionicus DSM 2032]
 gi|320123186|gb|ADW18732.1| ATP-dependent chaperone ClpB [Desulfobulbus propionicus DSM 2032]
          Length = 863

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 185/307 (60%), Gaps = 32/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +    E+ L  R++GQ  AI  ++ A++R   G  D D PL  F+FLG +G+GKT
Sbjct: 558 EGEKEKLVHAEEALGGRVIGQREAIVAVANAVRRARAGLQDPDRPLGSFIFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D ++A IR+DMSEY EKH VA+LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 618 ELARSLAEFLF-DSEQAMIRIDMSEYMEKHSVARLIGAPPGYVGYDEGGMLTEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+L DE++KAHPDV  VLLQ+ D+GR+TDGKG+T++ K+ I +MTSNL S+ I      
Sbjct: 677 AVILLDEIEKAHPDVFNVLLQVLDDGRMTDGKGRTVDFKNTILIMTSNLGSHIIM----- 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                 E ++  P            T+ R   D     +L R F + EFL RI+EI+ F 
Sbjct: 732 ------EMAQTDPE-----------TMRRQIDD-----LLHRQF-KPEFLNRIDEIITFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++  L  +V  ++   AK+ L +H   +    + +  L D GYD  +GAR +K  ++R
Sbjct: 769 GLTRDNLSQIVDIQIKRMAKR-LAEHKYKVTLTKEAKQFLVDTGYDPAFGARPLKRAIQR 827

Query: 551 QVVSQLA 557
            +   LA
Sbjct: 828 YIEDPLA 834


>gi|206890329|ref|YP_002249718.1| chaperone ClpB 1 [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742267|gb|ACI21324.1| chaperone ClpB 1 [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 876

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/307 (40%), Positives = 198/307 (64%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E ++   +E+RLK+R+VGQ+ AI  +S AI+R   G  D + P+  F+FLG +G+GKT
Sbjct: 558 ESETQKLIKMEERLKERVVGQDEAIIAVSNAIRRARAGLQDPNRPIGSFMFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D + A IR+DMSEYQE+H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 618 ELAKALAEFLF-DDENAMIRIDMSEYQERHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAH +V  +LLQ+ D+GRLTDG G+T++ ++ I +MTSN+ S  I      
Sbjct: 677 SVVLFDEIEKAHQEVFNILLQILDDGRLTDGHGRTVDFRNTIIIMTSNIGSAHI------ 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                +EF        +++GS     + +  K  ++  +  R F R EFL RI+EI+ F 
Sbjct: 731 -----QEF-------LENKGSEHWQDLKKDLKTRIIDDL--RAFFRPEFLNRIDEIIIFN 776

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVER 550
           P SK  +  ++  ++    K+ L +  I+I+   +  + I+  GYD  YGAR ++  +++
Sbjct: 777 PLSKEIMKDIIEIQIK-RIKQYLKQRKIDIILTEEAKDYIVRIGYDPVYGARPLRRVLQK 835

Query: 551 QVVSQLA 557
           +++  LA
Sbjct: 836 EILDALA 842


>gi|423123209|ref|ZP_17110892.1| hypothetical protein HMPREF9690_05214 [Klebsiella oxytoca 10-5246]
 gi|376391036|gb|EHT03717.1| hypothetical protein HMPREF9690_05214 [Klebsiella oxytoca 10-5246]
          Length = 949

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 198/318 (62%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R+  GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 REAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|327406003|ref|YP_004346841.1| ATP-dependent chaperone ClpB [Fluviicola taffensis DSM 16823]
 gi|327321511|gb|AEA46003.1| ATP-dependent chaperone ClpB [Fluviicola taffensis DSM 16823]
          Length = 870

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/316 (41%), Positives = 197/316 (62%), Gaps = 28/316 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E  +   LE  L  R+VGQE AI  IS A++R   G  D   P+  F+FLG +G+GKT
Sbjct: 551 ESEVSKLLRLEDELGKRVVGQEEAIEAISDAVRRSRAGLQDMRKPIGSFIFLGPTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D+  A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEFLFNDEN-AMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           ++VL DE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S     H +Q
Sbjct: 670 SIVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGS-----HLIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              EG +      +++K++           FK   V  +LK+   R EFL RI+E + F 
Sbjct: 725 ESFEGVKEENLHEAMNKAK-----------FK---VLELLKQTI-RPEFLNRIDETIIFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKH-NINIVWDIDVETILADGYDVHYGARSIKHEVER 550
           P +K  +  +V  +L+      L+K   I++  +     + A GYD H+GAR +K  +++
Sbjct: 770 PLNKRYVKQIVQLQLDQLKVMLLEKGIKIHMTEEAKAHLVEA-GYDPHFGARPVKRVIQK 828

Query: 551 QVVSQLAAAHEKSVIG 566
           QV+++L+    KS++G
Sbjct: 829 QVLNELS----KSILG 840


>gi|91227643|ref|ZP_01261920.1| ClpB protein [Vibrio alginolyticus 12G01]
 gi|269966581|ref|ZP_06180662.1| clpB protein [Vibrio alginolyticus 40B]
 gi|91188422|gb|EAS74716.1| ClpB protein [Vibrio alginolyticus 12G01]
 gi|269828766|gb|EEZ83019.1| clpB protein [Vibrio alginolyticus 40B]
          Length = 857

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E  L +R+VGQ  A++++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEDVLHNRVVGQSEAVSVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLASFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAT 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G             +   +DV +S+HF              R EFL R++EIV F 
Sbjct: 732 LDYQG------------IKSEVMDV-VSKHF--------------RPEFLNRVDEIVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +  + ++   +L   AK+  +K     V D  ++ I   G+D  YGAR +K  +++ 
Sbjct: 765 PLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGARPLKRAIQQN 824

Query: 552 VVSQLA 557
           V + LA
Sbjct: 825 VENPLA 830


>gi|399521160|ref|ZP_10761900.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pseudomonas
           pseudoalcaligenes CECT 5344]
 gi|399110398|emb|CCH38459.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Pseudomonas
           pseudoalcaligenes CECT 5344]
          Length = 949

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 197/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +KS+                V  +L+ HF R EF+ RI+EI+ F 
Sbjct: 777 RSAAGEEYEK-----TKSE----------------VMDVLRGHF-RPEFINRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|29350005|ref|NP_813508.1| endopeptidase Clp ATP-binding subunit B [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|383121018|ref|ZP_09941735.1| chaperone ClpB [Bacteroides sp. 1_1_6]
 gi|54035840|sp|Q89YY3.1|CLPB_BACTN RecName: Full=Chaperone protein ClpB
 gi|29341916|gb|AAO79702.1| endopeptidase Clp ATP-binding chain B [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251837649|gb|EES65740.1| chaperone ClpB [Bacteroides sp. 1_1_6]
          Length = 862

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 187/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK++  R EFL RI+E + FLP +++E+  
Sbjct: 727 -----MEKLSGSNKEEVIEETKKE--VMNMLKKNI-RPEFLNRIDETIMFLPLTETEIRQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + + + D  +  +   GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-GVQKMLAENGVELEMTDAALNFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|331700249|ref|YP_004336488.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190]
 gi|326954938|gb|AEA28635.1| ATP-dependent chaperone ClpB [Pseudonocardia dioxanivorans CB1190]
          Length = 871

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/340 (38%), Positives = 191/340 (56%), Gaps = 35/340 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L  R+VGQ  A+  +S A++R   G  D++ P   FLFLG +G+GKT
Sbjct: 556 EGETAKLLRMEDELGKRVVGQAEAVRSVSDAVRRARAGIADENRPTGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 616 ELAKALAEFLFDDER-AMVRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV   LLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA  AL 
Sbjct: 675 TVVLFDEVEKAHPDVFDTLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIADPALD 734

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                          KD V+  +++RHF + EFL R++++V F 
Sbjct: 735 ---------------------------DAARKDAVMS-VVQRHF-KPEFLNRLDDVVVFH 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             S  EL  +V  +L     +   +     V D   E +  +G+D  YGAR ++  V+  
Sbjct: 766 ALSTEELTHIVDIQLGVLGNRLARRRLTLDVSDAAREWLAMNGFDPVYGARPLRRLVQSS 825

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGII 591
           +  QLA       + +G  VR+ +  S         GG+I
Sbjct: 826 IGDQLAKELLAGAVREGDTVRVDLDPSAA----GGTGGLI 861


>gi|424668788|ref|ZP_18105813.1| hypothetical protein A1OC_02385 [Stenotrophomonas maltophilia
           Ab55555]
 gi|401072124|gb|EJP80633.1| hypothetical protein A1OC_02385 [Stenotrophomonas maltophilia
           Ab55555]
          Length = 949

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 197/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERVVGQDEAVRAVADAVRLARAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ +     +KS+                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEYER-----TKSE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|455641970|gb|EMF21141.1| chaperone ATPase [Citrobacter freundii GTC 09479]
          Length = 949

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 198/318 (62%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R+  GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 REAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|423117865|ref|ZP_17105554.1| hypothetical protein HMPREF9689_05611 [Klebsiella oxytoca 10-5245]
 gi|376375104|gb|EHS87902.1| hypothetical protein HMPREF9689_05611 [Klebsiella oxytoca 10-5245]
          Length = 949

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 198/318 (62%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R+  GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 REAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|335036129|ref|ZP_08529459.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
           ATCC 31749]
 gi|333792693|gb|EGL64060.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
           ATCC 31749]
          Length = 874

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/431 (35%), Positives = 225/431 (52%), Gaps = 53/431 (12%)

Query: 154 TVHRTAAEKKMNPFEVLLKREDEFNDVL---NPNMTFLGFSALHYGVVAGNTEVVELLLK 210
           T    A ++K+     L KR DE  + L     N  F     L YG++ G       L K
Sbjct: 460 TARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPG-------LEK 512

Query: 211 SGADPTVKDNSG--HIPSDYAEDANIKQILQKYA----EKYADLQREKEAEERRKYPLEQ 264
             A    +D+SG   +  +     NI  ++ ++     +K  + QREK         +E 
Sbjct: 513 ELAAAEARDSSGAGSMVQEVVTPDNIAHVVSRWTGIPVDKMLEGQREK------LLRMED 566

Query: 265 RLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHR 323
            L   +VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  
Sbjct: 567 ELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLF- 625

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D + A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P  VVLFDE++KAH
Sbjct: 626 DDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAH 685

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDV  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSNL S  + Q                
Sbjct: 686 PDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQ---------------- 729

Query: 444 PSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVC 503
                  G N DV   R      V   ++ HF R EFL RI++I+ F    + E+  +V 
Sbjct: 730 ------MGDNDDVDSVREL----VMERVRSHF-RPEFLNRIDDIILFHRLRRDEMGAIVE 778

Query: 504 RELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            +L        D+  I +  D D    LA+ GYD  YGAR +K  +++ V  +LA     
Sbjct: 779 IQLKRLVSLLADR-KITLELDEDARNWLANKGYDPAYGARPLKRVIQKSVQDRLAEMILG 837

Query: 563 SVIGKGSFVRL 573
             I  GS V++
Sbjct: 838 GEIPDGSRVKV 848


>gi|417861357|ref|ZP_12506412.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
           tumefaciens F2]
 gi|338821761|gb|EGP55730.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
           tumefaciens F2]
          Length = 874

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 227/431 (52%), Gaps = 53/431 (12%)

Query: 154 TVHRTAAEKKMNPFEVLLKREDEFNDVL---NPNMTFLGFSALHYGVVAGNTEVVELLLK 210
           T    A ++K+     L KR DE  + L     N  F     L YG++ G       L K
Sbjct: 460 TARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPG-------LEK 512

Query: 211 SGADPTVKDNSG--HIPSDYAEDANIKQILQKYA----EKYADLQREKEAEERRKYPLEQ 264
             A    +D+SG   +  +     NI  ++ ++     +K  + QREK         +E 
Sbjct: 513 ELAAAEARDSSGAASMVQEVVTADNIAHVVSRWTGIPVDKMLEGQREK------LLRMED 566

Query: 265 RLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHR 323
            L   +VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  
Sbjct: 567 ELAKSVVGQGEAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLF- 625

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D + A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P  VVLFDE++KAH
Sbjct: 626 DDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAH 685

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDV  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSNL S  + Q                
Sbjct: 686 PDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQ---------------- 729

Query: 444 PSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVC 503
                  G N DV   R      V   ++ HF R EFL R+++I+ F   ++ E+  +V 
Sbjct: 730 ------MGDNDDVDSVRDL----VMERVRSHF-RPEFLNRVDDIILFHRLARDEMGAIVE 778

Query: 504 RELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            +L       L    I++  D D  + LA+ GYD  YGAR +K  +++ V  +LA     
Sbjct: 779 IQLKRLV-SLLGDRKISLELDEDARSWLANKGYDPAYGARPLKRVIQKSVQDRLAEMILG 837

Query: 563 SVIGKGSFVRL 573
             I  GS V++
Sbjct: 838 GEIPDGSRVKV 848


>gi|225570736|ref|ZP_03779759.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
           15053]
 gi|225160198|gb|EEG72817.1| hypothetical protein CLOHYLEM_06839 [Clostridium hylemonae DSM
           15053]
          Length = 812

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 202/331 (61%), Gaps = 27/331 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           ++R  E+E  R   LEQ L  R++GQE A+  +S AIKR   G  D   P+  FLFLG +
Sbjct: 489 VKRLAESESARLNKLEQTLHKRVIGQEEAVRAVSKAIKRGRVGLKDPKRPIGSFLFLGPT 548

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL+K L+  +  ++ E+ IR+DMSEY EKH VAK+IG+PPGY+GHDDGGQL++++
Sbjct: 549 GVGKTELSKALSEALFGNE-ESMIRVDMSEYMEKHSVAKMIGSPPGYVGHDDGGQLSEQV 607

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVLFDE++KAHPDV  +LLQ+ D+G +TD +G+ ++ ++ + +MTSN      A
Sbjct: 608 RRHPYSVVLFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAG----A 663

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           Q  +  +K G  F+ R  +              +  KD+V++ I  +   R EF+ RI+E
Sbjct: 664 QAIIDPKKLG--FNAREDAAGD----------YKRMKDNVMREI--KLIFRPEFVNRIDE 709

Query: 487 IVYFLPFSKSELHTLV---CRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGAR 542
           I+ F P ++ E+  +V   CRE    A++ LD   I I V D   + I+  G D  +GAR
Sbjct: 710 IIVFHPLTQEEMKKIVGLMCREFTKRAREQLD---ITITVRDSVKKHIVETGTDQKFGAR 766

Query: 543 SIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
            ++  V+ Q+  +LA A     + +GS V +
Sbjct: 767 PLRRAVQNQLEDRLAEAILSGEVERGSAVEI 797


>gi|254230259|ref|ZP_04923650.1| chaperone ClpB [Vibrio sp. Ex25]
 gi|262395161|ref|YP_003287015.1| ClpB protein [Vibrio sp. Ex25]
 gi|451977393|ref|ZP_21927478.1| chaperone ClpB [Vibrio alginolyticus E0666]
 gi|151937239|gb|EDN56106.1| chaperone ClpB [Vibrio sp. Ex25]
 gi|262338755|gb|ACY52550.1| ClpB protein [Vibrio sp. Ex25]
 gi|451929725|gb|EMD77457.1| chaperone ClpB [Vibrio alginolyticus E0666]
          Length = 857

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E  L +R+VGQ  A++++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEDVLHNRVVGQSEAVSVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLASFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAT 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G             +   +DV +S+HF              R EFL R++EIV F 
Sbjct: 732 LDYQG------------IKSEVMDV-VSKHF--------------RPEFLNRVDEIVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +  + ++   +L   AK+  +K     V D  ++ I   G+D  YGAR +K  +++ 
Sbjct: 765 PLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGARPLKRAIQQN 824

Query: 552 VVSQLA 557
           V + LA
Sbjct: 825 VENPLA 830


>gi|372488159|ref|YP_005027724.1| chaperone ATPase [Dechlorosoma suillum PS]
 gi|359354712|gb|AEV25883.1| ATPase with chaperone activity, ATP-binding subunit [Dechlorosoma
           suillum PS]
          Length = 949

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 198/318 (62%), Gaps = 33/318 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +KS+                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEYEK-----TKSE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K    R
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELK----R 869

Query: 551 QVVSQLAAAHEKSVIGKG 568
            + S+L  A  + ++G G
Sbjct: 870 LIRSELETALAREMLGGG 887


>gi|167389932|ref|XP_001739140.1| heat shock protein [Entamoeba dispar SAW760]
 gi|165897287|gb|EDR24500.1| heat shock protein, putative [Entamoeba dispar SAW760]
          Length = 866

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 192/316 (60%), Gaps = 33/316 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E+ R   LE+ L  R++GQ  A+  +S AI R   G  ++  P   F+FLG SG+GKT
Sbjct: 555 QTEKTRLMNLEEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D ++  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAVELF-DDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ I +MTSNL S  I      
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIM----- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   +  +S+  K+ V++ I+K+ F + EFL R+++I+ F 
Sbjct: 729 ------------------KGVETEGQVSKKVKETVME-IVKKTF-KPEFLNRLDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++ ++ V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKMIKKRYPLSEVEMTEAAIEGIIKSGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVI 565
           + VV+ +     KS+I
Sbjct: 829 KTVVTSIT----KSII 840


>gi|421176337|ref|ZP_15634004.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
           aeruginosa CI27]
 gi|404531145|gb|EKA41111.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
           aeruginosa CI27]
          Length = 949

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 198/318 (62%), Gaps = 33/318 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGGKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +KS+                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEYEK-----TKSE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K    R
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELK----R 869

Query: 551 QVVSQLAAAHEKSVIGKG 568
            + S+L  A  + ++G G
Sbjct: 870 LIRSELETALAREMLGGG 887


>gi|242372741|ref|ZP_04818315.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
 gi|242349514|gb|EES41115.1| ClpB ATPase [Staphylococcus epidermidis M23864:W1]
          Length = 818

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/342 (37%), Positives = 206/342 (60%), Gaps = 26/342 (7%)

Query: 218 KDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAI 277
           K++ G + +  +E+ +I +++  +      L +  E E  R   LE  L +R++GQ  A+
Sbjct: 461 KNSQGGVSTSLSEE-DIAEVIAGWT--GIPLTKINETESERLLNLEDTLHERVIGQNDAV 517

Query: 278 NIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSE 336
           N IS A++R   G  D   P+  F+FLG +G+GKTELA+ LA  +   + +A IR+DMSE
Sbjct: 518 NSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMF-GEDDAMIRVDMSE 576

Query: 337 YQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDE 396
           + EKH V++L+GAPPGY+GHDDGGQLT+++++ P +V+LFDE++KAHPDV  +LLQ+ D+
Sbjct: 577 FMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDD 636

Query: 397 GRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDV 456
           G LTD KG+T++ ++ + +MTSN+ + E+         + + F+    +   S+G++ + 
Sbjct: 637 GHLTDTKGRTVDFRNTVIIMTSNVGAQEL---------QDQRFAGFGGA---SEGNDYET 684

Query: 457 TISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDK 516
                 K+      LK  F R EFL R+++I+ F   SK EL  +V   +N    + L +
Sbjct: 685 IRKTMMKE------LKNSF-RPEFLNRVDDIIVFHKLSKEELKEIVTMMVNKLTAR-LSE 736

Query: 517 HNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
            NINI V D   E I  +GYD  YGAR +   +++ V   L+
Sbjct: 737 QNINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLS 778


>gi|428221827|ref|YP_007105997.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 7502]
 gi|427995167|gb|AFY73862.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 7502]
          Length = 869

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/320 (37%), Positives = 199/320 (62%), Gaps = 33/320 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   LE  L +R++GQ  A+  +S AI+R   G +D + P+  F+FLG +G+GKT
Sbjct: 560 ESEKAKLLYLEDELHERVIGQSQAVTAVSDAIQRSRAGLSDPNRPIASFIFLGPTGVGKT 619

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +EA +R+DMSEY EKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 620 ELAKALANYLF-DTEEAMVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRRPY 678

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  ++LQ+ D+GR+TD +G+T++ K+AI +MTSN+ S    Q+ L 
Sbjct: 679 AVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKNAIIIMTSNIGS----QYILD 734

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  +  ++                       +D V++ +  R   R EFL RI+EI+ F 
Sbjct: 735 IGGDDSKYE--------------------IMRDRVMESM--RSSFRPEFLNRIDEIIIFH 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              + EL  +V  ++    ++  ++     + +  ++ +   GYD  YGAR +K  ++RQ
Sbjct: 773 SLRREELRQIVKLQVQRLEQRLSERKMSLHLSESALDFVAEVGYDPVYGARPLKRVIQRQ 832

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           + +Q+A    KS++ +G F+
Sbjct: 833 LETQIA----KSIL-RGDFI 847


>gi|423392449|ref|ZP_17369675.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
 gi|401634586|gb|EJS52351.1| chaperone ClpB [Bacillus cereus BAG1X1-3]
          Length = 866

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|334119144|ref|ZP_08493231.1| ATP-dependent chaperone ClpB [Microcoleus vaginatus FGP-2]
 gi|333458615|gb|EGK87232.1| ATP-dependent chaperone ClpB [Microcoleus vaginatus FGP-2]
          Length = 871

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 189/306 (61%), Gaps = 31/306 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E ++   LE  L  R++GQ+ A+  ++ AI+R   G  D + P+  F+FLG +G+GKT
Sbjct: 560 ESEMQKLLHLEDELHKRVIGQDEAVTAVADAIQRSRAGLADPNRPVASFIFLGPTGVGKT 619

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +EA +R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 620 ELAKALASYLF-DTEEAIVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPY 678

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  ++LQ+ D+GR+TD +G T++ K+++ +MTSN+ S    Q+ L 
Sbjct: 679 SVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSVIIMTSNVGS----QYILD 734

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  + EE   R                        V   ++  F R EFL RI+E++ F 
Sbjct: 735 VAGDNEEMRSR------------------------VMEAMRGTF-RPEFLNRIDEMIIFH 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             SK+EL  +V  ++    K+  D+     + +  ++ +   GYD  YGAR +K  ++R+
Sbjct: 770 GLSKAELRQIVLLQVKRLEKRLADRKMSLKLSESAIDFLAEIGYDPVYGARPLKRGIQRE 829

Query: 552 VVSQLA 557
           + +Q+A
Sbjct: 830 LETQMA 835


>gi|260063087|ref|YP_003196167.1| endopeptidase Clp ATP-binding chain B [Robiginitalea biformata
           HTCC2501]
 gi|88784656|gb|EAR15826.1| endopeptidase Clp ATP-binding chain B [Robiginitalea biformata
           HTCC2501]
          Length = 866

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 190/307 (61%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE+ L  R+VGQ+ AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLQLEEVLHKRVVGQDEAIEAVSDAIRRSRAGLQDAKRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKTLAAYLF-DDENAMTRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   VLLQ+ DEGRLTD KG+  + ++ I +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDTFNVLLQVLDEGRLTDNKGRVADFRNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F       S ++ + ++V             +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ETFEDNPDIYSATEAARVEVL-----------GLLKKSI-RPEFLNRIDDIIMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P S+ ++  +V  +L+   +  L   +I I    +    LAD G+D  YGAR IK  +++
Sbjct: 768 PLSREDIRQVVRLQLDH-VRSMLAAQHIEIDATEEAVEYLADKGFDPQYGARPIKRVIQK 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNKLS 833


>gi|326404211|ref|YP_004284293.1| chaperone protein ClpB [Acidiphilium multivorum AIU301]
 gi|338991920|ref|ZP_08634710.1| Chaperone protein clpB [Acidiphilium sp. PM]
 gi|325051073|dbj|BAJ81411.1| chaperone protein ClpB [Acidiphilium multivorum AIU301]
 gi|338205148|gb|EGO93494.1| Chaperone protein clpB [Acidiphilium sp. PM]
          Length = 860

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 140/387 (36%), Positives = 218/387 (56%), Gaps = 43/387 (11%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YGV+       E+  K  A PT     G + ++   +A I Q++ ++     D  R
Sbjct: 500 SELMYGVIP------EIERKLAAGPT----EGAMVNEAVTEAQIAQVVARWTGIPVD--R 547

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  +   +E+ L+ R+VGQE+A+  +S A++R   G  D + P+  FLFLG +G+G
Sbjct: 548 MLEGERAKLIRMEEELRKRVVGQEAALRAVSDAVRRARAGLQDPNRPIGSFLFLGPTGVG 607

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTE  K LA ++  D++ A +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ 
Sbjct: 608 KTETCKALAEFLFDDER-AMVRIDMSEFMEKHAVARLIGAPPGYVGYEEGGVLTEAVRRR 666

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  V+LFDEV+KAH DV  VLLQ+ D+GRLTDG+G+T++ K+ I V+TSNL S  +A   
Sbjct: 667 PYQVILFDEVEKAHEDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIVLTSNLGSEVLAAQ- 725

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
                EGE+     P + +                     ++++HF R EFL R++EI+ 
Sbjct: 726 ----PEGEDVVLAEPQVMR---------------------VVRQHF-RPEFLNRLDEIIL 759

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEV 548
           F    ++++  +V  +L        D+  I +  D      LA +GYD  YGAR +K  +
Sbjct: 760 FRRLQRADMARIVEIQLRHLESLLADR-KITLHLDQAARDWLANEGYDPVYGARPLKRVI 818

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           +R + ++LA    +  I  G  V + V
Sbjct: 819 QRSLQNKLATRLLEGAIHDGETVNVTV 845


>gi|313673099|ref|YP_004051210.1| ATP-dependent chaperone clpb [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939855|gb|ADR19047.1| ATP-dependent chaperone ClpB [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 866

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/346 (37%), Positives = 213/346 (61%), Gaps = 27/346 (7%)

Query: 230 EDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKEN 289
           ++ +I +I+ K+         E+EAE+  K  +E+ L  R++GQ+ AI+ IS AI+R   
Sbjct: 536 DEEDIAEIIAKWTGIPVTKLLEEEAEKLIK--MEENLHKRVIGQDKAISSISEAIRRSRA 593

Query: 290 GWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIG 348
           G ++   P+  F+FLG +G+GKTELAK LA ++  D ++A IR+DMSEY EKH VAKLIG
Sbjct: 594 GLSNPKRPIGSFIFLGPTGVGKTELAKALAEFLF-DSEDALIRIDMSEYMEKHSVAKLIG 652

Query: 349 APPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIE 408
           APPGY+G+D+GGQLT+++++ P +V+LFDE++KAHPDV  ++LQ+ D+GRLTD KG+ + 
Sbjct: 653 APPGYVGYDEGGQLTEKVRRRPYSVILFDEIEKAHPDVFNIMLQILDDGRLTDSKGRVVS 712

Query: 409 CKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQ 468
            K+ + +MTSN+ S E+ Q   +   +G  + +    ISK                 +V 
Sbjct: 713 FKNTVIIMTSNIGS-ELIQTEFE---KGGSWEEEYDRISK-----------------LVF 751

Query: 469 PILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-V 527
            I+ ++F + EFL R+++I+ F P SK  L  +    L+   K+ +    +++ +D   V
Sbjct: 752 NIISQYF-KPEFLNRVDDIIVFHPLSKDHLSKIAILLLDELKKRLMANIEVDMEYDATVV 810

Query: 528 ETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
           E ++  GYD  +GAR +K  +++ + +++A    K  I K S + +
Sbjct: 811 EELIKAGYDPKFGARPMKRALQKLIENRIAEEIIKGNIKKNSKIAI 856


>gi|110833340|ref|YP_692199.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           borkumensis SK2]
 gi|110646451|emb|CAL15927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           borkumensis SK2]
          Length = 865

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/328 (36%), Positives = 194/328 (59%), Gaps = 24/328 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E+ +   +E  L DR+VGQ  A+  ++ A++R   G +D + P   FLFLG +G+GKT
Sbjct: 556 EGEKDKLLRMEDALHDRVVGQNEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 616 ELCKALANFLF-DTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S+        
Sbjct: 675 SVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSD-------- 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         I K  GS+ +           V  ++  HF R EFL R++E V F 
Sbjct: 727 -------------LIQKLAGSDAESASDYETMKSAVMEVVGNHF-RPEFLNRVDETVVFH 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +K +L  +   +L F  K+  ++     + D  ++ ++  G+D  YGAR +K  +++Q
Sbjct: 773 PLAKDQLKGIASIQLGFLRKRLAEREMSLELSDAALDQLVDAGFDPVYGARPLKRAIQQQ 832

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSK 579
           + + LA +  K    +G  + + V+  +
Sbjct: 833 LENPLAQSLLKGEYVQGDTIHVDVEEGR 860


>gi|386821263|ref|ZP_10108479.1| ATP-dependent chaperone ClpB [Joostella marina DSM 19592]
 gi|386426369|gb|EIJ40199.1| ATP-dependent chaperone ClpB [Joostella marina DSM 19592]
          Length = 868

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/307 (41%), Positives = 190/307 (61%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  +S AI+R   G  D + P+  FLFLG++G+GKT
Sbjct: 552 QSEREKLLNLEDELHRRVVGQEEAIESVSDAIRRSRAGLQDANRPIGSFLFLGTTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 612 ELAKALADYLF-DDESAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q
Sbjct: 671 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNIGS-----HIIQ 725

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F       S +Q + ++V             +LK+   R EF+ RI++IV F 
Sbjct: 726 -----EKFEATEDIDSATQAAKVEVL-----------GLLKQSV-RPEFINRIDDIVMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +++ +  +V  +L     K + K NI I       T LA  GYD  YGAR +K  +++
Sbjct: 769 PLTEANIKDIVKLQLK-GITKMVAKQNITIDATEQAITHLAKIGYDPQYGARPVKRVLQK 827

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 828 EVLNKLS 834


>gi|228938389|ref|ZP_04100999.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228971268|ref|ZP_04131896.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977878|ref|ZP_04138259.1| Chaperone protein clpB 1 [Bacillus thuringiensis Bt407]
 gi|384185188|ref|YP_005571084.1| ClpB protein [Bacillus thuringiensis serovar chinensis CT-43]
 gi|410673483|ref|YP_006925854.1| chaperone protein ClpB [Bacillus thuringiensis Bt407]
 gi|452197498|ref|YP_007477579.1| ClpB protein [Bacillus thuringiensis serovar thuringiensis str.
           IS5056]
 gi|228781795|gb|EEM29992.1| Chaperone protein clpB 1 [Bacillus thuringiensis Bt407]
 gi|228788418|gb|EEM36369.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821251|gb|EEM67266.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326938897|gb|AEA14793.1| ClpB protein [Bacillus thuringiensis serovar chinensis CT-43]
 gi|409172612|gb|AFV16917.1| chaperone protein ClpB [Bacillus thuringiensis Bt407]
 gi|452102891|gb|AGF99830.1| ClpB protein [Bacillus thuringiensis serovar thuringiensis str.
           IS5056]
          Length = 866

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  ++H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLAERHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|254421795|ref|ZP_05035513.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
 gi|196189284|gb|EDX84248.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
          Length = 871

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/331 (37%), Positives = 202/331 (61%), Gaps = 32/331 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      L +  E+E ++   LE  L  R++GQ+ A+  ++ +I+R   G
Sbjct: 538 EADIAEIISKWT--GIPLSKLVESEMQKLLNLEDELHQRVIGQDEAVTAVADSIQRSRAG 595

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D D P+  F+FLG +G+GKTELAK LA Y+  D +EA +R+DMSEY EKH V++L+GA
Sbjct: 596 LADPDRPMASFIFLGPTGVGKTELAKALASYLF-DTEEAMVRIDMSEYMEKHSVSRLVGA 654

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+D+GGQLT+ +++ P AV+LFDE++KAHPDV  +LLQ+ D+GR+TD +G+T++ 
Sbjct: 655 PPGYVGYDEGGQLTEAVRRRPFAVILFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDF 714

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
            ++I +MTSN+ S    Q+ L +  +  ++ +    ++ +                    
Sbjct: 715 TNSIIIMTSNIGS----QYILDIAGDDTQYDEMRSRVTDA-------------------- 750

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
            L+  F R EFL RI+EI+ F    KS+L  +V  ++     + L++  + +        
Sbjct: 751 -LRSQF-RPEFLNRIDEIIIFHALVKSQLRDIVKIQIKRLEAR-LEERKLALKLSDAALD 807

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAA 559
            LAD GYD  YGAR +K  ++R++ +++A A
Sbjct: 808 FLADVGYDPTYGARPLKRAIQREIETKIAKA 838


>gi|67465519|ref|XP_648944.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
 gi|56465258|gb|EAL43558.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 866

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/317 (38%), Positives = 192/317 (60%), Gaps = 33/317 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ R   LE  +  R++GQ+ A+  +S AI R   G  ++  P+  F+FLG SGIGKT
Sbjct: 555 QSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGIGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAAELF-DSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ + +MTSNL S  I +    
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIMK---- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G      +    K+ V++ I+K+ F+  EFL R+++I+ F 
Sbjct: 730 -------------------GVETTGQVDEQVKEQVME-IVKKSFK-PEFLNRMDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++  + V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVIG 566
           + VV+++     KS+IG
Sbjct: 829 KTVVTEIT----KSIIG 841


>gi|332298105|ref|YP_004440027.1| ATP-dependent chaperone ClpB [Treponema brennaborense DSM 12168]
 gi|332181208|gb|AEE16896.1| ATP-dependent chaperone ClpB [Treponema brennaborense DSM 12168]
          Length = 865

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 191/311 (61%), Gaps = 40/311 (12%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A E++KY  LE  L  R++GQ+ A+N ++ AI+R   G +D++ PL  FLF+G +G+GKT
Sbjct: 559 AGEKQKYLELENVLHKRVIGQDEAVNSVADAIRRNRAGLSDENRPLGSFLFIGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D+K +  R+DMSEY EK  V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ELAKTLADFLFNDEK-SLTRIDMSEYMEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+ I+ K+ I +MTSNL           
Sbjct: 678 SVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRMIDFKNTIIIMTSNL----------- 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP----ILKRHFRRDEFLGRINEI 487
                              GS+L +      K + ++P    +LK  F R EFL RI+E+
Sbjct: 727 -------------------GSDLILEADTSEKLNAIKPQLDSLLKSTF-RPEFLNRIDEV 766

Query: 488 VYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKH 546
           + F    KS +  +V  ++   AK+ L++  I ++   D    LAD GYD  +GAR IK 
Sbjct: 767 ITFTRLDKSNIAAIVRNQIERVAKR-LEERRITLIVKDDAIGFLADVGYDPLFGARPIKR 825

Query: 547 EVERQVVSQLA 557
            ++  + + LA
Sbjct: 826 SIQAYLENPLA 836


>gi|295676317|ref|YP_003604841.1| ATPase AAA [Burkholderia sp. CCGE1002]
 gi|295436160|gb|ADG15330.1| ATPase AAA-2 domain protein [Burkholderia sp. CCGE1002]
          Length = 896

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/319 (39%), Positives = 193/319 (60%), Gaps = 24/319 (7%)

Query: 255 EERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           E+ R   +EQRL  R++GQ+ A+  +S A++R   G      P  VFLFLG +G+GKTEL
Sbjct: 576 EKERLLNMEQRLHQRVIGQDEAVVAVSDAVRRARAGLQARHRPTAVFLFLGPTGVGKTEL 635

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           AK LA  +  D+ +A +R DMSEY E+H VA+LIG+PPGY+G+++GGQLT+R+++ P  V
Sbjct: 636 AKALAEVVFGDE-DAMLRFDMSEYMERHTVARLIGSPPGYVGYEEGGQLTERVRRRPYCV 694

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           +L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + + + TSNLAS+ I        
Sbjct: 695 ILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNLASDVITGQ----N 750

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
           + G  F  +  S+S   G               V  +L++HF R EFL RI++I+ F   
Sbjct: 751 RTGPGFFSQAGSVSVESG---------------VMNVLRQHF-RPEFLNRIDDIIVFKSL 794

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQV 552
            + E   +V R L    ++     +I + +D   V+ +  +GY   +GAR ++ +++++V
Sbjct: 795 GRDETRHIV-RILLEQVRRIASSQDIELSFDDSLVDHVATEGYRPEFGARELRRQIQQRV 853

Query: 553 VSQLAAAHEKSVIGKGSFV 571
            + LA A     IG+G  V
Sbjct: 854 ENPLAKALINGEIGEGMRV 872


>gi|152968159|ref|YP_001363943.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
 gi|151362676|gb|ABS05679.1| ATPase AAA-2 domain protein [Kineococcus radiotolerans SRS30216]
          Length = 878

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/346 (36%), Positives = 199/346 (57%), Gaps = 31/346 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ +A+  +S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 556 EGETEKLLRMEEFLGARLIGQTTAVQAVSDAVRRSRAGVNDPDRPTGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 616 ELAKALADFLFDDER-AMVRIDMSEYSEKHAVARLVGAPPGYVGYEEGGQLTEAVRRRPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHP+V  +LLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  +      
Sbjct: 675 SVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILVLTSNLGSQYL------ 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                 +D  +S+  K   V   ++ +F + EFL R++++V F 
Sbjct: 729 ----------------------VDPELSQATKHDAVMTAVRANF-KPEFLNRLDDVVVFD 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P S  EL  +V  ++   A +  D+  +  V D   + +   GYD  YGAR ++  V+R+
Sbjct: 766 PLSTQELSRIVEIQVQRLADRLADRRFVLDVSDAAKDWLALTGYDPAYGARPLRRLVQRE 825

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKK 597
           +  +LA A     +  G  V + V       +D A  G   L V++
Sbjct: 826 IGDKLARAILSGEVRDGDTVEVDVARGSFDLDDPASAGTNGLVVRR 871


>gi|423315676|ref|ZP_17293581.1| ATP-dependent chaperone ClpB [Bergeyella zoohelcum ATCC 43767]
 gi|405585780|gb|EKB59583.1| ATP-dependent chaperone ClpB [Bergeyella zoohelcum ATCC 43767]
          Length = 866

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/291 (43%), Positives = 185/291 (63%), Gaps = 20/291 (6%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQE AI  ++ AI+R   G  D+  P+  FLFLG++G+GKTELAK LA ++  D+  
Sbjct: 565 RVVGQEEAIEAVANAIRRNRAGLNDEKKPIGSFLFLGTTGVGKTELAKALAEFLFDDENN 624

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++KAHPDV 
Sbjct: 625 -MTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVVLLDEIEKAHPDVF 683

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
             LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I  +         E ++ T S  
Sbjct: 684 NTLLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSHLIQDNF-------SEINEATTSFE 736

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
            S+       I    K  V   +LK+   R EFL RI+E V F P +KSE+  +V  +L 
Sbjct: 737 LSE-------IVEKTKTEVFD-LLKQTL-RPEFLNRIDETVLFQPLNKSEVGKIVQFQLR 787

Query: 508 FWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQVVSQLA 557
               K L+K NI +    D ++ IL+ GYD  +GAR +K  V++ V++QL+
Sbjct: 788 -GINKMLEKKNIILTATQDAIDFILSKGYDPAFGARPLKRVVQQMVLNQLS 837


>gi|91775523|ref|YP_545279.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
 gi|91709510|gb|ABE49438.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
          Length = 949

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 197/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|78778595|ref|YP_396707.1| ATPase [Prochlorococcus marinus str. MIT 9312]
 gi|78712094|gb|ABB49271.1| ATPase [Prochlorococcus marinus str. MIT 9312]
          Length = 918

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/308 (42%), Positives = 191/308 (62%), Gaps = 23/308 (7%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + ER+K   LE+ L ++++GQE AI  +SAAI+R   G      P+  FLF+G +G+GKT
Sbjct: 601 SNERKKLVNLEKELSEKVIGQEKAIEAVSAAIRRARVGMKSPKRPIGSFLFMGPTGVGKT 660

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D++EA +RLDMSEY EK+ VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 661 ELAKSLASSLF-DEEEALLRLDMSEYMEKNAVARLLGAPPGYVGYEEGGQLTEAVRRKPY 719

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH +V  +LLQ+ DEGRLTD +G+T++ K+ + +MTSNLA   I      
Sbjct: 720 SVILLDEIEKAHTEVFNILLQVLDEGRLTDSQGRTVDFKNTVIIMTSNLAGKFIL----- 774

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                 E+S++   ISKS+G    +   +   D  +   L   F R EFL RI+E+V F 
Sbjct: 775 ------EYSQK---ISKSEGK---LEKDQQILDDSISNTLSSIF-RPEFLNRIDEVVKFD 821

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVER 550
           P S  EL  ++  +     K  L +  INI  D  V   I  D Y+  YGAR +  E+ R
Sbjct: 822 PLSIDELQKIIILQTEDL-KNLLLEQKINITIDKKVINKIANDSYEPKYGARPLSRELRR 880

Query: 551 QVVSQLAA 558
           Q+ + LAA
Sbjct: 881 QIENPLAA 888


>gi|367477513|ref|ZP_09476863.1| Chaperone [Bradyrhizobium sp. ORS 285]
 gi|365270192|emb|CCD89331.1| Chaperone [Bradyrhizobium sp. ORS 285]
          Length = 879

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/348 (38%), Positives = 204/348 (58%), Gaps = 35/348 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD   K+N+G +  +     +I Q++ ++     D  +  E E+ +   +E  L  R+VG
Sbjct: 516 ADIEAKENAGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLRMEDSLGKRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A++ ++ A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+  A +R
Sbjct: 574 QFEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S+          
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSE---------- 737

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA- 510
                      ++ V+  + + HF R EFL R++EI+ F    KSE+  +V  E+ F   
Sbjct: 738 ----------VRELVIGTV-RGHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EIQFSRL 783

Query: 511 KKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVERQVVSQLA 557
           +K + +  I +  D D    L A G+D  YGAR +K  ++R V   LA
Sbjct: 784 QKLVAERKITLSLDGDARDWLAAKGWDPAYGARPLKRVIQRSVQDPLA 831


>gi|218902368|ref|YP_002450202.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus AH820]
 gi|218537757|gb|ACK90155.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus AH820]
          Length = 866

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDSSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|408492842|ref|YP_006869211.1| ATP-dependent chaperone ClpB [Psychroflexus torquis ATCC 700755]
 gi|408470117|gb|AFU70461.1| ATP-dependent chaperone ClpB [Psychroflexus torquis ATCC 700755]
          Length = 861

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/298 (41%), Positives = 185/298 (62%), Gaps = 26/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE +L  R+VGQE AI  +S A++R   G  D + P+  FLFLG++G+GKTELAK LA Y
Sbjct: 560 LEDQLHKRVVGQEEAIQAVSDAVRRSRAGLQDQNRPIGSFLFLGTTGVGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D + +  R+DMSEYQE+H V++L+GAPPGY+G+++GGQLT+ +++ P +V+L DE++
Sbjct: 620 MF-DDESSMTRIDMSEYQERHSVSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPD   +LLQ+ DEGRLTD KG+  + K++I VMTSN+ S     H +Q     E++ 
Sbjct: 679 KAHPDTFNILLQVLDEGRLTDNKGRLADFKNSIIVMTSNIGS-----HIIQ-----EKYD 728

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                 S  + + +DV              L R   R EFL RI+++V F P SK+ +  
Sbjct: 729 TTKDVESAMESAKVDVL------------GLLRQSVRPEFLNRIDDVVMFTPLSKNNIKE 776

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    KK L K  I I   +  +E I   G+D  YGAR +K  ++++V++ L+
Sbjct: 777 IVGLQLK-GLKKMLMKQGITIDATEQAIEYIAKIGFDPQYGARPVKRTIQKEVLNILS 833


>gi|198275954|ref|ZP_03208485.1| hypothetical protein BACPLE_02137 [Bacteroides plebeius DSM 17135]
 gi|198271583|gb|EDY95853.1| ATP-dependent chaperone protein ClpB [Bacteroides plebeius DSM
           17135]
          Length = 862

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 187/307 (60%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEREKLLHLEDELHKRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEKH V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDESLMTRIDMSEYQEKHTVSRLIGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSAYIQSQ--- 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                           K    N D  +    K+  V  +LK+   R EFL RI+E + F 
Sbjct: 727 --------------FEKINDQNHDQIVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFQ 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P +K ++  +V  ++N   +K L+ + + + + D  V+ +   GYD  +GAR +K  ++R
Sbjct: 770 PLNKPQIEQIVRLQIN-GIRKMLEGNGVTLQMTDAAVDFLATAGYDPEFGARPVKRAIQR 828

Query: 551 QVVSQLA 557
            +++ L+
Sbjct: 829 YLLNDLS 835


>gi|189501345|ref|YP_001960815.1| ATPase AAA [Chlorobium phaeobacteroides BS1]
 gi|189496786|gb|ACE05334.1| ATPase AAA-2 domain protein [Chlorobium phaeobacteroides BS1]
          Length = 440

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/324 (37%), Positives = 198/324 (61%), Gaps = 25/324 (7%)

Query: 256 ERRKYPL-EQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           ER+K  L +Q L  R++GQ+ A+  +S A+KR   G  D+  P+  F+FLG +G+GKTEL
Sbjct: 128 ERQKLLLIDQELHKRVIGQDKAVQAVSEAVKRSRAGMGDEKRPIGSFIFLGPTGVGKTEL 187

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           A+ LA Y+  D ++A IR+DMSEY E H V++L+GAPPGY+G+++GGQLT+ +++ P +V
Sbjct: 188 ARTLAEYLF-DDEDAMIRIDMSEYMESHSVSRLVGAPPGYIGYEEGGQLTEAVRRRPFSV 246

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           VL DE++KAHPDV  +LLQ+ D+GRLTD KG T+  K+ I +MTSN+ +  I        
Sbjct: 247 VLLDEIEKAHPDVFNILLQILDDGRLTDSKGHTVNFKNTIIIMTSNIGAQLIQSE----- 301

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
                       + K  G N D  +    +D +   +L +   + EFL RI+E++ F P 
Sbjct: 302 ------------MEKMDGENRDAVLE-TLQDKLF--LLLKQQVKPEFLNRIDEVILFTPL 346

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQV 552
           ++ +L  +V  + N   K AL + NI++  D    T L++ G+D  +GAR +K  ++R +
Sbjct: 347 TRKDLEKIVTIQFNSINKLAL-RQNISLHLDDSALTWLSNAGFDPAFGARPLKRVMQRSI 405

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQ 576
            ++L+    +  + +G  V++ V+
Sbjct: 406 TNKLSEMILEGTVREGDSVQVTVE 429


>gi|414085966|ref|YP_006973814.1| ATPase with chaperone activity [Klebsiella pneumoniae]
 gi|410475242|gb|AFV70479.1| ATPase with chaperone activity [Klebsiella pneumoniae]
          Length = 964

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 198/318 (62%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 614 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGGKPVATFLFLGPTGVGKTE 673

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 674 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 732

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 733 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 791

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R+  GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 792 REAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 829

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 830 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 888

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 889 ELETALAREMLGGGIGKG 906


>gi|320160812|ref|YP_004174036.1| chaperone ClpB [Anaerolinea thermophila UNI-1]
 gi|319994665|dbj|BAJ63436.1| chaperone ClpB [Anaerolinea thermophila UNI-1]
          Length = 861

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 193/307 (62%), Gaps = 35/307 (11%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E ++   +E+RL  R+VGQ+ A+  +S AI+R   G  D + P+  F+FLG +G+GKT
Sbjct: 554 EGEMKKLLEMEERLHQRVVGQDEAVRAVSNAIRRARAGLQDPNRPIGSFIFLGPTGVGKT 613

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D + A IR+DMSEYQEKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 614 ELARALAEFMF-DDEHAMIRIDMSEYQEKHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPY 672

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHP+V  VLLQL D+GRLTDG+G+T++ ++ + +MTSNL S       L 
Sbjct: 673 SVVLFDEIEKAHPEVFNVLLQLLDDGRLTDGQGRTVDFRNVVVIMTSNLGSE------LW 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L   G+        +S+ Q       I+R         +L+ HF R EFL RI+E+V F 
Sbjct: 727 LSNVGQ--------VSREQ-------ITR---------VLQAHF-RPEFLNRIDEVVVFH 761

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P  +  L  +V  +L    +  L++   ++    + +  LA+ GYD  +GAR +K  ++R
Sbjct: 762 PLGQEHLQKIVEIQLRRM-QNLLEERGYHLEVTKEAKAYLAEVGYDPDFGARPLKRAIQR 820

Query: 551 QVVSQLA 557
           ++   LA
Sbjct: 821 ELQDPLA 827


>gi|42780361|ref|NP_977608.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus ATCC 10987]
 gi|54035773|sp|Q73BY1.1|CLPB_BACC1 RecName: Full=Chaperone protein ClpB
 gi|42736280|gb|AAS40216.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus ATCC 10987]
          Length = 866

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/325 (38%), Positives = 196/325 (60%), Gaps = 27/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEDDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           V ++LA     S I   S V + V+
Sbjct: 833 VETKLARELIASTITDNSHVVVDVE 857


>gi|383787672|ref|YP_005472240.1| chaperone ClpB [Caldisericum exile AZM16c01]
 gi|381363308|dbj|BAL80137.1| chaperone ClpB [Caldisericum exile AZM16c01]
          Length = 868

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 195/313 (62%), Gaps = 26/313 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ LK R+VGQ+ A+  +S AI+R   G +D + P+  F+FLG +G+GKTELAK LA  
Sbjct: 566 LEETLKKRVVGQDQAVEAVSNAIRRARAGLSDPNRPIGSFIFLGPTGVGKTELAKALAEA 625

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D ++A IR+DMSEY EK  V++LIGAPPGY+G+++GGQLT+ +++ P +V+L DE++
Sbjct: 626 LF-DTEKALIRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTEAVRRQPYSVILLDEIE 684

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ-HALQLRKEGEEF 439
           KAHPDV  +LLQ+ D+GRLTD KG+T++ K+ I +MTSN+ S  I + +A+    E  E 
Sbjct: 685 KAHPDVFNILLQVLDDGRLTDSKGRTVDFKNTIIIMTSNIGSKYITEINAIPGTAEYREQ 744

Query: 440 SKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELH 499
            +R               + R +++        RH  R EFL RI+EIV F P +  EL 
Sbjct: 745 YER--------------VVERVYEEM-------RHIFRPEFLNRIDEIVVFNPLTIRELK 783

Query: 500 TLVCRELNFWAKKALDKHNINIVWDIDVET-ILADGYDVHYGARSIKHEVERQVVSQLAA 558
            +V   L+   +K L +  I + ++ DV+T I+  GYD  YGAR ++  +++ V + LA 
Sbjct: 784 AIVDLLLSKTNEK-LKEKGIIVEFEEDVKTFIINKGYDPVYGARPLRRAIQKYVENPLAE 842

Query: 559 AHEKSVIGKGSFV 571
              +  I KG  V
Sbjct: 843 FILREDIEKGEIV 855


>gi|288803299|ref|ZP_06408732.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
           D18]
 gi|288334119|gb|EFC72561.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
           D18]
          Length = 862

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/298 (41%), Positives = 180/298 (60%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V +LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDES-MMTRIDMSEYQEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+G LTD KG+T+  K+ I +MTSNL S  I Q    L       +
Sbjct: 679 KAHPDVFNILLQVLDDGHLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFEHLND-----T 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I K++ + +D              +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 734 NREEVIDKAKVAVMD--------------MLKKTI-RPEFLNRIDETIMFLPLTKEQIGD 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K  L+   I + W       L+D GYD  +GAR +K  ++R V++ L+
Sbjct: 779 VVRLQLE-RVKDMLEPQGIELQWTDPAINYLSDVGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|255654110|ref|ZP_05399519.1| ATP-dependent Clp protease [Clostridium difficile QCD-23m63]
 gi|296449851|ref|ZP_06891618.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
           difficile NAP08]
 gi|296877915|ref|ZP_06901935.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
           difficile NAP07]
 gi|296261338|gb|EFH08166.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
           difficile NAP08]
 gi|296431112|gb|EFH16939.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
           difficile NAP07]
          Length = 815

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 209/333 (62%), Gaps = 19/333 (5%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   LE+ L +R++GQE A+  IS AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 498 EEEADRLLRLEEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKT 557

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL+K LA     D+ +  IR+DMSEY EKH V+++IG+PPGY+GHD+GGQLT+++++ P 
Sbjct: 558 ELSKALAEVQFGDENQ-IIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPY 616

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQ+ D+GRLTD KG+T++ K+ I +MTSN+ ++ I +    
Sbjct: 617 SVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTIGR---- 672

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                    ++T   S ++G   + +     K++++   LK+ F R EFL RI++I+ F 
Sbjct: 673 ---------QKTLGFSIAKGDEEEKSQYEKMKENIMGE-LKQRF-RPEFLNRIDDIIVFH 721

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
             +++ +  +V   +    ++ L + +I + + D  V+ I   G+D+ YGAR +K  +++
Sbjct: 722 SLNENHISKIVLL-MAAKLQERLKEMDIKLEMSDEAVKLISKSGFDLEYGARPLKRALQK 780

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
           ++  +L+ A  K  + KGS V   V+  K V E
Sbjct: 781 ELEDELSEAILKGNVKKGSNVVAKVKDEKIVFE 813


>gi|408370006|ref|ZP_11167785.1| ATP-dependent chaperone ClpB [Galbibacter sp. ck-I2-15]
 gi|407744481|gb|EKF56049.1| ATP-dependent chaperone ClpB [Galbibacter sp. ck-I2-15]
          Length = 868

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/308 (40%), Positives = 191/308 (62%), Gaps = 28/308 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE++L  R+VGQ  AI  +S AI+R  +G  D + P+  FLFLG++G+GKT
Sbjct: 552 QSEREKLLNLEEQLHRRVVGQHEAIESVSDAIRRSRSGLQDANRPIGSFLFLGTTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 612 ELAKALAEYLF-DDESALTRIDMSEYQERHAVSRLIGAPPGYVGYDEGGQLTEAVRRKPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S  I      
Sbjct: 671 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDSKGRLADFKNTIIIMTSNIGSQIIQ----- 725

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F       S ++ + ++V             ILK+   R EF+ RI++IV F 
Sbjct: 726 -----EKFENSNDIASATESARVEVL-----------GILKQSV-RPEFINRIDDIVMFT 768

Query: 492 PFSKSELHTLVCRELNF-WAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVE 549
           P SK ++  +V  EL F    + + K NI +      +E +   G+D  YGAR +K  ++
Sbjct: 769 PLSKVDIKEIV--ELQFKGVARMVAKQNITLDATQEAIEHLSRVGFDPQYGARPVKRVIQ 826

Query: 550 RQVVSQLA 557
           ++V+++L+
Sbjct: 827 KEVLNKLS 834


>gi|126697592|ref|YP_001086489.1| class III stress response-related ATPase [Clostridium difficile
           630]
 gi|254973677|ref|ZP_05270149.1| ATP-dependent Clp protease [Clostridium difficile QCD-66c26]
 gi|255091069|ref|ZP_05320547.1| ATP-dependent Clp protease [Clostridium difficile CIP 107932]
 gi|255099184|ref|ZP_05328161.1| ATP-dependent Clp protease [Clostridium difficile QCD-63q42]
 gi|255304967|ref|ZP_05349139.1| ATP-dependent Clp protease [Clostridium difficile ATCC 43255]
 gi|255312722|ref|ZP_05354305.1| ATP-dependent Clp protease [Clostridium difficile QCD-76w55]
 gi|255515482|ref|ZP_05383158.1| ATP-dependent Clp protease [Clostridium difficile QCD-97b34]
 gi|255648575|ref|ZP_05395477.1| ATP-dependent Clp protease [Clostridium difficile QCD-37x79]
 gi|306518705|ref|ZP_07405052.1| ATP-dependent Clp protease [Clostridium difficile QCD-32g58]
 gi|384359346|ref|YP_006197198.1| ATP-dependent Clp protease [Clostridium difficile BI1]
 gi|423080678|ref|ZP_17069297.1| negative regulator of genetic competence ClpC/MecB [Clostridium
           difficile 002-P50-2011]
 gi|423085125|ref|ZP_17073582.1| negative regulator of genetic competence ClpC/MecB [Clostridium
           difficile 050-P50-2011]
 gi|423089367|ref|ZP_17077727.1| negative regulator of genetic competence ClpC/MecB [Clostridium
           difficile 70-100-2010]
 gi|115249029|emb|CAJ66840.1| class III stress response-related ATPase, AAA+ superfamily
           [Clostridium difficile 630]
 gi|357550773|gb|EHJ32582.1| negative regulator of genetic competence ClpC/MecB [Clostridium
           difficile 050-P50-2011]
 gi|357552742|gb|EHJ34509.1| negative regulator of genetic competence ClpC/MecB [Clostridium
           difficile 002-P50-2011]
 gi|357558303|gb|EHJ39802.1| negative regulator of genetic competence ClpC/MecB [Clostridium
           difficile 70-100-2010]
          Length = 815

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 209/333 (62%), Gaps = 19/333 (5%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   LE+ L +R++GQE A+  IS AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 498 EEEADRLLRLEEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKT 557

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL+K LA     D+ +  IR+DMSEY EKH V+++IG+PPGY+GHD+GGQLT+++++ P 
Sbjct: 558 ELSKALAEVQFGDENQ-IIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPY 616

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQ+ D+GRLTD KG+T++ K+ I +MTSN+ ++ I +    
Sbjct: 617 SVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTIGR---- 672

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                    ++T   S ++G   + +     K++++   LK+ F R EFL RI++I+ F 
Sbjct: 673 ---------QKTLGFSIAKGDEEEKSQYEKMKENIMGE-LKQRF-RPEFLNRIDDIIVFH 721

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
             +++ +  +V   +    ++ L + +I + + D  V+ I   G+D+ YGAR +K  +++
Sbjct: 722 SLNENHISKIVLL-MAAKLQERLKEMDIKLEMSDEAVKLISKSGFDLEYGARPLKRALQK 780

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
           ++  +L+ A  K  + KGS V   V+  K V E
Sbjct: 781 ELEDELSEAILKGNVKKGSNVVAKVKDEKIVFE 813


>gi|183230397|ref|XP_001913434.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
 gi|169802915|gb|EDS89785.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 866

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 123/317 (38%), Positives = 192/317 (60%), Gaps = 33/317 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ R   LE  +  R++GQ+ A+  +S AI R   G  ++  P+  F+FLG SGIGKT
Sbjct: 555 QSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGIGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAAELF-DSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ + +MTSNL S  I +    
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIMK---- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G      +    K+ V++ I+K+ F+  EFL R+++I+ F 
Sbjct: 730 -------------------GVETTGQVDEQVKEQVME-IVKKSFK-PEFLNRMDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++  + V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVIG 566
           + VV+++     KS+IG
Sbjct: 829 KTVVTEIT----KSIIG 841


>gi|256824427|ref|YP_003148387.1| ATPase with chaperone activity [Kytococcus sedentarius DSM 20547]
 gi|256687820|gb|ACV05622.1| ATPase with chaperone activity, ATP-binding subunit [Kytococcus
           sedentarius DSM 20547]
          Length = 865

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/376 (36%), Positives = 210/376 (55%), Gaps = 42/376 (11%)

Query: 217 VKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESA 276
           V D +  + SD     +I +++  +    A   R  E E  +   +E+ L +R++GQ +A
Sbjct: 527 VGDATAPMVSDAVTADDIAEVIAAWTGISAG--RLLEGETEKLLRMEEFLGERLIGQTAA 584

Query: 277 INIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMS 335
           +  +S A++R   G  D D P   FLFLG +G+GKTELAK LA ++  D++ A +R+DMS
Sbjct: 585 VRAVSDAVRRSRAGLADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDER-AMVRIDMS 643

Query: 336 EYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFD 395
           EY E+H VA+L+GAPPGY+GHD+GGQLT+ +++ P +VVL DEV+KAHP+   +LLQ+ D
Sbjct: 644 EYSERHAVARLVGAPPGYVGHDEGGQLTEAVRRRPYSVVLLDEVEKAHPETFDILLQVLD 703

Query: 396 EGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD 455
           +GRLTDG+G+T++ ++ I +MTSNL S  +   +L       + + RT S+  +      
Sbjct: 704 DGRLTDGQGRTVDFRNTILIMTSNLGSQYLVDPSL-------DPAVRTESVMAA------ 750

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
             +  HFK               EFL R+++ V F P S+ EL  +V  +++  A + L 
Sbjct: 751 --VRAHFK--------------PEFLNRLDDTVVFEPLSREELARIVDLQVDALASR-LA 793

Query: 516 KHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLY 574
              I +         LAD GYD  +GAR ++  V+ +V   LA A     +  G  V + 
Sbjct: 794 ARRITLQVTDAARAWLADQGYDPAFGARPLRRLVQTEVGDTLARALLAGEVRDGQEVTVD 853

Query: 575 VQWSKEVSEDSAKGGI 590
           V        D A+GG+
Sbjct: 854 VA-------DDAEGGL 862


>gi|374709167|ref|ZP_09713601.1| class III stress response-related ATPase [Sporolactobacillus
           inulinus CASD]
          Length = 816

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 196/325 (60%), Gaps = 29/325 (8%)

Query: 252 KEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGK 310
           ++ E  R   +E  L +R++GQ  AIN IS AI+R   G  D   P+  F+FLG +G+GK
Sbjct: 494 EQKESERLLNMESILHERVIGQNEAINAISHAIRRARAGLKDPKRPIGSFIFLGPTGVGK 553

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TELA+ +A  +  D+ E+ IR+DMSEY EKH  ++L+G+PPGY+GHD+GGQLT+++++ P
Sbjct: 554 TELARAVAETLFGDE-ESIIRIDMSEYMEKHTTSRLVGSPPGYVGHDEGGQLTEKVRQKP 612

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH-- 428
            +V+LFDE++KAHPDV  +LLQ+ D+GRLTD KG+T++ ++   +MTSN+ ++++ ++  
Sbjct: 613 YSVILFDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTAIIMTSNVGASQLKKNKY 672

Query: 429 -ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEI 487
               + +EG E+                    +  K+ V+   LKR F R EFL RI+EI
Sbjct: 673 VGFSVDEEGHEY--------------------KEMKERVMGE-LKRAF-RPEFLNRIDEI 710

Query: 488 VYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKH 546
           + F    K EL  +V   L    +  L    I I + D     I+ +GYD  YGAR ++ 
Sbjct: 711 IVFHELKKEELMEIVTL-LADQLRNRLSNQGIQIDLTDAAKRQIVEEGYDPEYGARPLRR 769

Query: 547 EVERQVVSQLAAAHEKSVIGKGSFV 571
            ++R+V  +L+    K  I KG+ V
Sbjct: 770 ALQRKVEDKLSEELLKGNIKKGTNV 794


>gi|392407856|ref|YP_006444464.1| chaperone ATPase [Anaerobaculum mobile DSM 13181]
 gi|390620992|gb|AFM22139.1| ATPase with chaperone activity, ATP-binding subunit [Anaerobaculum
           mobile DSM 13181]
          Length = 829

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 203/326 (62%), Gaps = 24/326 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E +R   +E+ +  RI+ QE A+++++ AI+R  +G  D   P+  FLFLG +G+GKT
Sbjct: 499 EEESQRLLRMEEEIHKRIIDQEEAVSVVARAIRRARSGLKDPKRPIGSFLFLGPTGVGKT 558

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL+K LA ++  D+  + IRLDMSE+ E+HEV+KLIGAPPGY+G+++GG+LT+ +++ P 
Sbjct: 559 ELSKALAEFLFGDEN-SMIRLDMSEFMERHEVSKLIGAPPGYVGYEEGGKLTEAVRRRPY 617

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVLFDE++KAHPDV  +LLQ+ ++GRLTDG+G+ ++ K+ + +MTSNL + ++      
Sbjct: 618 AVVLFDEIEKAHPDVFNILLQILEDGRLTDGQGRVVDFKNTVIIMTSNLGAQDLM----- 672

Query: 432 LRKEGEEFSKRTPSI--SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
                     + PSI  S +  S LD       K ++++ + +R F R EF+ RI+EIV 
Sbjct: 673 ----------KGPSIGFSVTSESGLDF---EDAKKNILEAV-RRTF-RPEFINRIDEIVV 717

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVE 549
           F P ++ EL  +V   +   AK+  +K  I  V D     +L  GY+  +GAR ++  ++
Sbjct: 718 FKPLAEKELLQIVDLMIKDVAKRLAEKGLIIEVTDAAKNFLLKKGYEPKFGARPLRRTIQ 777

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYV 575
           R +  +LA    +  I  G  +++ V
Sbjct: 778 RYIEDKLADILLEGKIKPGEVIKVDV 803


>gi|108763122|ref|YP_633246.1| ATP-dependent chaperone protein ClpB [Myxococcus xanthus DK 1622]
 gi|108467002|gb|ABF92187.1| ATP-dependent chaperone protein ClpB [Myxococcus xanthus DK 1622]
          Length = 874

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/344 (39%), Positives = 204/344 (59%), Gaps = 36/344 (10%)

Query: 229 AEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKE 288
           AED  I Q++ K+      + R  E E ++   +E RL +R++GQ SAI  +S A++R  
Sbjct: 535 AED--IAQVVAKWT--GIPVSRLMEGEVQKLVHMEDRLANRVIGQRSAIEAVSNAVRRAR 590

Query: 289 NGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLI 347
           +G  D + P+  F+FLG +G+GKTE AK LA ++  D   A +R+DMSEY EKH VA+L+
Sbjct: 591 SGLQDPNRPIGSFIFLGPTGVGKTETAKALAEFLF-DDDSAMVRIDMSEYMEKHSVARLV 649

Query: 348 GAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTI 407
           GAPPGY+G+++GGQLT+ +++ P  VVLFDE++KAH DV  VLLQ+ DEGRLTD +G+T+
Sbjct: 650 GAPPGYVGYEEGGQLTEAVRRRPYTVVLFDEIEKAHHDVFNVLLQILDEGRLTDSQGRTV 709

Query: 408 ECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVV 467
           + K+ + ++TSN+ S +I Q  +  +   EE  +RT                     + V
Sbjct: 710 DFKNTVLILTSNIGSQDI-QAGMAGK---EELDERT--------------------RNEV 745

Query: 468 QPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV 527
              L+ HF R EFL R++EIV F P  K +++ +V  +L   +K   DK     + +   
Sbjct: 746 MDALRAHF-RPEFLNRVDEIVIFEPLRKKDIYRIVDLQLARLSKLLADKRLTLELTEKAR 804

Query: 528 ETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
           E +   GYD  YGAR +K  V++ ++  LA      V+G G FV
Sbjct: 805 ELLAERGYDPTYGARPLKRAVQKNLLDPLAL----KVLG-GEFV 843


>gi|307564635|ref|ZP_07627168.1| ATP-dependent chaperone protein ClpB [Prevotella amnii CRIS 21A-A]
 gi|307346659|gb|EFN91963.1| ATP-dependent chaperone protein ClpB [Prevotella amnii CRIS 21A-A]
          Length = 863

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/293 (41%), Positives = 181/293 (61%), Gaps = 24/293 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R++GQE AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y+  D+  
Sbjct: 568 RVIGQEEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADYLFNDET- 626

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV 
Sbjct: 627 MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVF 686

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q   +LR++  E         
Sbjct: 687 NILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFQELREDNRE--------- 737

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                     +  H K  V+  +LK+   R EFL RI+E + FLP ++ ++  +V  +L 
Sbjct: 738 ---------QVIEHTKTEVMN-MLKQTI-RPEFLNRIDETIMFLPLTQEQIAGVVRLQLE 786

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAA 559
             AK+ L    + + W       LA+ GYD  +GAR +K  ++  V++ L+ +
Sbjct: 787 -RAKEMLMPQGLVLTWTEPAVKHLAEIGYDPEFGARPVKRAIQHYVLNDLSKS 838


>gi|429107069|ref|ZP_19168938.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
           malonaticus 681]
 gi|429109071|ref|ZP_19170841.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
           malonaticus 507]
 gi|426293792|emb|CCJ95051.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
           malonaticus 681]
 gi|426310228|emb|CCJ96954.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cronobacter
           malonaticus 507]
          Length = 369

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 197/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 19  EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 78

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 79  LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 137

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 138 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 196

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 197 RGAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 234

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 235 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 293

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 294 ELETALAREMLGGSIGKG 311


>gi|260681795|ref|YP_003213080.1| ATP-dependent Clp protease [Clostridium difficile CD196]
 gi|260685392|ref|YP_003216525.1| ATP-dependent Clp protease [Clostridium difficile R20291]
 gi|260207958|emb|CBA60088.1| ATP-dependent Clp protease [Clostridium difficile CD196]
 gi|260211408|emb|CBE01489.1| ATP-dependent Clp protease [Clostridium difficile R20291]
          Length = 749

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 208/333 (62%), Gaps = 19/333 (5%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   LE+ L +R++GQE A+  IS AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 432 EEEADRLLRLEEILHNRVIGQEQAVKSISKAIRRSRAGLKDPNRPIGSFLFLGPTGVGKT 491

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL+K LA     D+ +  IR+DMSEY EKH V+++IG+PPGY+GHD+GGQLT+++++ P 
Sbjct: 492 ELSKALAEVQFGDENQ-IIRIDMSEYMEKHAVSRMIGSPPGYVGHDEGGQLTEKVRRNPY 550

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQ+ D+GRLTD KG+T++ K+ I +MTSN+ ++ I +    
Sbjct: 551 SVILFDEIEKAHPDVFNILLQILDDGRLTDSKGRTVDFKNTIVIMTSNVGASTIGRQ--- 607

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                     +T   S ++G   + +     K++++   LK+ F R EFL RI++I+ F 
Sbjct: 608 ----------KTLGFSIAKGDEEEKSQYEKMKENIMGE-LKQRF-RPEFLNRIDDIIVFH 655

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
             +++ +  +V   +    ++ L + +I + + D  V+ I   G+D+ YGAR +K  +++
Sbjct: 656 SLNENHISKIVLL-MAAKLQERLKEMDIKLEMSDEAVKLISKSGFDLEYGARPLKRALQK 714

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
           ++  +L+ A  K  + KGS V   V+  K V E
Sbjct: 715 ELEDELSEAILKGNVKKGSNVVAKVKDEKIVFE 747


>gi|114799774|ref|YP_759360.1| ATP-dependent chaperone protein ClpB [Hyphomonas neptunium ATCC
           15444]
 gi|114739948|gb|ABI78073.1| ATP-dependent chaperone protein ClpB [Hyphomonas neptunium ATCC
           15444]
          Length = 872

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/341 (38%), Positives = 201/341 (58%), Gaps = 33/341 (9%)

Query: 219 DNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAIN 278
           D  G + S+     +I  ++ K+     D   E E E+  +  +E  L+ R+VGQE A+ 
Sbjct: 523 DAEGGLVSEVVRPEDIAGVVSKWTGIPVDKMMEGEREKLLR--MEDSLRGRVVGQEDALL 580

Query: 279 IISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEY 337
            +S A++R   G  D + P+  FLF+G +G+GKTEL K LA ++  D   A +RLDMSE+
Sbjct: 581 AVSNAVRRARAGLQDPNRPIGSFLFVGPTGVGKTELTKALAEFMF-DDDTAILRLDMSEF 639

Query: 338 QEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEG 397
            EKH VA+LIGAPPGY+G+D+GG LT+ +++ P  VVLFDEV+KAHPD+   LLQ+ D+G
Sbjct: 640 SEKHSVARLIGAPPGYVGYDEGGVLTESVRRRPYQVVLFDEVEKAHPDLFNTLLQVLDDG 699

Query: 398 RLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVT 457
           RLTDG+G+T++ K+ I +MTSNL ++ +A       +EGE                    
Sbjct: 700 RLTDGQGRTVDFKNTIIIMTSNLGADALASG-----EEGE-------------------- 734

Query: 458 ISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKH 517
           +S   ++HV+  I +RHF R EF+ RI+EIV+F    + E+  +V  ++    ++ L   
Sbjct: 735 VSEQAREHVMGAI-RRHF-RPEFINRIDEIVFFKRLGRGEIDHIVDIQMGRL-EQLLKDR 791

Query: 518 NINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
            + +   +D    LA  GYD  YGAR +K  +++++   LA
Sbjct: 792 KMKLDLSLDARNWLAARGYDPVYGARPLKRVIQKELQDPLA 832


>gi|423404202|ref|ZP_17381375.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
 gi|423475167|ref|ZP_17451882.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
 gi|401647409|gb|EJS65018.1| chaperone ClpB [Bacillus cereus BAG2X1-2]
 gi|402436849|gb|EJV68876.1| chaperone ClpB [Bacillus cereus BAG6X1-1]
          Length = 866

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEADGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAREFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|310657474|ref|YP_003935195.1| protein disaggregation chaperone [[Clostridium] sticklandii]
 gi|308824252|emb|CBH20290.1| protein disaggregation chaperone [[Clostridium] sticklandii]
          Length = 821

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 190/301 (63%), Gaps = 24/301 (7%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQE A+  IS AI+R   G  D   P+  F+FLG +G+GKTEL+K LA  
Sbjct: 508 LENILHKRVIGQEEAVEAISRAIRRARTGMKDPKRPIGSFIFLGPTGVGKTELSKALAEA 567

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+ ++ +R+DMSEY EKH V+KLIG+PPGY+G+D+GGQLT+++++ P +VVLFDE++
Sbjct: 568 MFEDE-DSIVRIDMSEYMEKHSVSKLIGSPPGYVGYDEGGQLTEKIRRKPYSVVLFDEIE 626

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA-QHALQLRKEGEEF 439
           KAHPDV  +LLQ+ D+GRLTD KG+T++ K+ + +MTSN+ +  I  Q  L      +E 
Sbjct: 627 KAHPDVFNMLLQILDDGRLTDSKGRTVDFKNTVLIMTSNVGATTIQKQKTLGFSTVTDEE 686

Query: 440 SKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELH 499
            K   +  K              KD+V+   LKR F + EFL R+++I+ F   +  EL 
Sbjct: 687 KKEKAAYEK-------------MKDNVMVE-LKRSF-KPEFLNRVDDIIVFHALTDRELE 731

Query: 500 TLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEVERQVVSQL 556
            +V   ++   K+ +DK   NI  ++D   ++ I  +GYD+ +GAR +K  ++R +  ++
Sbjct: 732 KIVYLMISNLEKRLMDK---NITIELDEAAMKLITKNGYDLEFGARPLKRAIQRLLEDEI 788

Query: 557 A 557
           +
Sbjct: 789 S 789


>gi|257457408|ref|ZP_05622579.1| ATP-dependent chaperone protein ClpB [Treponema vincentii ATCC
           35580]
 gi|257445330|gb|EEV20402.1| ATP-dependent chaperone protein ClpB [Treponema vincentii ATCC
           35580]
          Length = 858

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/340 (38%), Positives = 205/340 (60%), Gaps = 45/340 (13%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A E++KY  LE  L+ R+VGQ+ A+  ++ AI+R   G +D + PL  FL +G +G+GKT
Sbjct: 557 ASEQQKYLDLESVLQKRVVGQDQAVQAVADAIRRNRAGLSDPNRPLGSFLCIGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D + A  R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 617 ELARTLADFLFNDDR-ALTRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  V LQ+ D+GRLTDG+G+ I+ ++ I +MTSNL S  I      
Sbjct: 676 SVVLFDEIEKAHPDVFNVFLQILDDGRLTDGQGRVIDFRNTIIIMTSNLGSELI------ 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                   S  TP    +Q                ++ +LK+HF R EFL RI+E++ F 
Sbjct: 730 -------LSADTPEEMTAQ----------------IKDLLKQHF-RPEFLNRIDELLTFG 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              K  +  +V  +L   + + L+   ++++     +  LAD GYD  YGAR +K  ++ 
Sbjct: 766 RLGKEHIRKIVDIQLQAVSAR-LEARRLHLIVTDAAKDFLADIGYDPLYGARPLKRAIQT 824

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGI 590
           ++ ++LA    K ++  G+FV        +++ D+ KGG+
Sbjct: 825 ELENKLA----KELLS-GAFV-----GKTDITVDAGKGGL 854


>gi|148260817|ref|YP_001234944.1| ATPase [Acidiphilium cryptum JF-5]
 gi|146402498|gb|ABQ31025.1| ATPase AAA-2 domain protein [Acidiphilium cryptum JF-5]
          Length = 860

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/387 (35%), Positives = 218/387 (56%), Gaps = 43/387 (11%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YGV+       E+  K  A PT     G + ++   +A I Q++ ++     D  R
Sbjct: 500 SELMYGVIP------EIERKLAAGPT----EGAMVNEAVTEAQIAQVVARWTGIPVD--R 547

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  +   +E+ L+ R+VGQE+A+  +S A++R   G  D + P+  FLFLG +G+G
Sbjct: 548 MLEGERAKLIRMEEELRKRVVGQEAALRAVSDAVRRARAGLQDPNRPIGSFLFLGPTGVG 607

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTE  K LA ++  D++ A +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ 
Sbjct: 608 KTETCKALAEFLFDDER-AMVRIDMSEFMEKHAVARLIGAPPGYVGYEEGGVLTEAVRRR 666

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  V+LFDEV+KAH DV  VLLQ+ D+GRLTDG+G+T++ K+ I V+TSNL S  +A   
Sbjct: 667 PYQVILFDEVEKAHEDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIVLTSNLGSEVLAAQ- 725

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
                EGE+     P + +                     ++++HF R EFL R++EI+ 
Sbjct: 726 ----PEGEDVVLAEPQVMR---------------------VVRQHF-RPEFLNRLDEIIL 759

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEV 548
           F    ++++  +V  +L        D+  I +  D      LA +GYD  YGAR +K  +
Sbjct: 760 FRRLQRADMARIVEIQLRHLESLLADR-KITLHLDQAARDWLANEGYDPVYGARPLKRVI 818

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           +R + ++LA    +  I  G  V + +
Sbjct: 819 QRSLQNKLATRLLEGAIHDGETVNVTI 845


>gi|418871544|ref|ZP_13425920.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-125]
 gi|418949170|ref|ZP_13501429.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-157]
 gi|375368097|gb|EHS72024.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-125]
 gi|375369614|gb|EHS73487.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-157]
          Length = 818

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 191/312 (61%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D+ +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDE-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|423460840|ref|ZP_17437637.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
 gi|401139685|gb|EJQ47244.1| chaperone ClpB [Bacillus cereus BAG5X2-1]
          Length = 866

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLGADGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAREFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|229160228|ref|ZP_04288227.1| Chaperone protein clpB 1 [Bacillus cereus R309803]
 gi|228623189|gb|EEK80016.1| Chaperone protein clpB 1 [Bacillus cereus R309803]
          Length = 866

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTANEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|171913581|ref|ZP_02929051.1| ATP-dependent chaperone protein ClpB [Verrucomicrobium spinosum DSM
           4136]
          Length = 858

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 191/312 (61%), Gaps = 34/312 (10%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R +E E  +   +E RL +R++GQ++AI  +S A++R   G  D++ P+  FLFLG +
Sbjct: 551 VSRLQEGERSKLTHMEDRLANRVIGQKNAIKAVSNAVRRARAGLQDENRPIGSFLFLGPT 610

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL+K LA ++  D + A  R+DMSEY EKH VA+LIGAPPGY+G+++GGQLT+ +
Sbjct: 611 GVGKTELSKALAEFLF-DDENAMTRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEAV 669

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVLFDEV+KAHPDV   LLQ+ D+GR+TDG+G+T++ ++ + +MTSN+ S    
Sbjct: 670 RRRPYSVVLFDEVEKAHPDVFNSLLQVLDDGRITDGQGRTVDFRNTVIIMTSNIGS---- 725

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
            HA+Q     E+                        ++ +V+  L R F R EFL RI+E
Sbjct: 726 -HAIQEEANPEQ------------------------REALVRDAL-RQFFRPEFLNRIDE 759

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIK 545
           ++ F      +L  +V  +L     + L K NI +V  D  V  I  +GYD  +GAR +K
Sbjct: 760 VIIFDRLDARDLSAIVKVQLQRVVSR-LAKQNIGLVLTDEAVRKIADEGYDPVFGARPLK 818

Query: 546 HEVERQVVSQLA 557
             ++R V+  L+
Sbjct: 819 RAIQRLVLDPLS 830


>gi|377811246|ref|YP_005043686.1| ATPase [Burkholderia sp. YI23]
 gi|357940607|gb|AET94163.1| ATPase [Burkholderia sp. YI23]
          Length = 910

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 198/323 (61%), Gaps = 26/323 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   +E+RL  R++GQ+ A+  +S A++R   G    + P+ VFLFLG +G+GKT
Sbjct: 578 EEERARLLNMEERLHKRVIGQDEAVEAVSDAVRRARTGLQGRNRPIAVFLFLGPTGVGKT 637

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A +R+DMSEY E+H V++LIG+PPGY+G+D+GGQLT+R+++ P 
Sbjct: 638 ELAKALAEVVFGDE-DAMLRVDMSEYMERHAVSRLIGSPPGYVGYDEGGQLTERVRRRPY 696

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + + + TSNL S+ IA     
Sbjct: 697 SVILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTLIIATSNLGSDVIAGQ--- 753

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                    KR      +  ++ D ++        V  +L++HF R EFL RI++I+ F 
Sbjct: 754 ---------KRATLGFTASATDADASLQSG-----VMSVLRQHF-RPEFLNRIDDIILFR 798

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
              + E+  +V   L+   + A   H+ +IV D D   V+ +   GY   +GAR ++ ++
Sbjct: 799 SLGRDEVRHIVRLLLDQVQRMA---HSQDIVLDFDESVVDHLAEVGYRPEFGARELRRQI 855

Query: 549 ERQVVSQLAAAHEKSVIGKGSFV 571
            + + ++LA    +  + +G+ V
Sbjct: 856 RQLIENRLAKEMLRGDVAEGAKV 878


>gi|452951349|gb|EME56799.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Amycolatopsis
           decaplanina DSM 44594]
          Length = 866

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/325 (38%), Positives = 192/325 (59%), Gaps = 33/325 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ+ A+ ++S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 557 EGETGKLLRMEEELGKRVIGQKEAVQVVSDAVRRTRAGVADPDRPTGSFLFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 617 ELAKALAEFLFDDER-AMLRIDMSEYAEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA  AL 
Sbjct: 676 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIADPALD 735

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            R+                            ++  V  +++R F + EFL R+++IV F 
Sbjct: 736 ERQ----------------------------RNDAVMAVVQRQF-KPEFLNRLDDIVVFH 766

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
                EL ++V  ++   A + L +  + + V D   E +  +G+D  YGAR ++  V+ 
Sbjct: 767 ALGTDELTSIVDIQIARLATR-LSRRRLTLEVTDGAREWLALNGFDPIYGARPLRRLVQS 825

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
            +  +LA       I  G  VR+ +
Sbjct: 826 AIGDKLAKQLLAGEIRDGDTVRVDI 850


>gi|183235698|ref|XP_001914289.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
 gi|169800404|gb|EDS88935.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 866

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/317 (38%), Positives = 192/317 (60%), Gaps = 33/317 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ R   LE  +  R++GQ+ A+  +S AI R   G  ++  P+  F+FLG SG+GKT
Sbjct: 555 QSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAAELF-DSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ + +MTSNL S  I +    
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIMK---- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G      +    K+ V++ I+K+ F+  EFL R+++I+ F 
Sbjct: 730 -------------------GVETTGQVDEQVKEQVME-IVKKSFK-PEFLNRMDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++  + V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVIG 566
           + VV+++     KS+IG
Sbjct: 829 KTVVTEIT----KSIIG 841


>gi|206977690|ref|ZP_03238582.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus H3081.97]
 gi|206744118|gb|EDZ55533.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus H3081.97]
          Length = 866

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S  +      
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHL------ 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L   GE+ S +  S     G                   L+ HF R EFL R++EI+ F 
Sbjct: 732 LDGLGEDGSIKEESRELVMGQ------------------LRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|302829945|ref|XP_002946539.1| hypothetical protein VOLCADRAFT_79064 [Volvox carteri f.
           nagariensis]
 gi|300268285|gb|EFJ52466.1| hypothetical protein VOLCADRAFT_79064 [Volvox carteri f.
           nagariensis]
          Length = 867

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/320 (39%), Positives = 199/320 (62%), Gaps = 28/320 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E  +   L + L  R++GQ+ A+  ++ AI+R   G +D + P+  F+FLG +G+GKT
Sbjct: 530 ESEREKLLHLAEELHKRVIGQDGAVEAVADAIQRSRAGLSDPNRPIASFMFLGPTGVGKT 589

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  + ++A +R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 590 ELAKALAQFLF-NTEDAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPY 648

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDEV+KAH DV  VLLQ+ D+GR+TD +G+ +  K+AI ++TSNL S  I + A  
Sbjct: 649 AVILFDEVEKAHADVFNVLLQILDDGRVTDSQGRVVSFKNAIIILTSNLGSANILEMASA 708

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  EG++ +      +KS   NL            V   ++ HF R EF+ RI+E + F 
Sbjct: 709 L--EGDDLA------AKSAIKNL------------VMAQVRSHF-RPEFVNRIDEFIIFD 747

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P S+ ++ ++V  +    A++  +K     + +  V  + A GYD  YGAR +K  V+R+
Sbjct: 748 PLSQEQIASIVRLQARRVAERLAEKKIGLQLTESAVRHLAAVGYDPVYGARPVKRAVQRE 807

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           + + +A A     + +G FV
Sbjct: 808 LETNIAKA-----LLRGEFV 822


>gi|406920421|gb|EKD58489.1| hypothetical protein ACD_56C00114G0005 [uncultured bacterium]
          Length = 871

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/320 (38%), Positives = 194/320 (60%), Gaps = 21/320 (6%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +E+ L  R++GQ+ AI  +S AI+R   G ++++ P+  F+FLG +G+GKTELAK LA +
Sbjct: 566 MEEELSKRVIGQDEAIKAVSNAIRRSRAGISEENRPIGSFIFLGPTGVGKTELAKTLAEF 625

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D K A +RLDMSEY E H  AK++G+PPGY+G+++GGQLT+ +++ P +V+LFDE++
Sbjct: 626 MFNDPK-ALVRLDMSEYMESHSTAKMVGSPPGYVGYEEGGQLTEIVRRRPYSVILFDEIE 684

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHP V  +LLQ+ D+GRLTD KG+ +  K+ + VMTSN+ S+ I +         E F 
Sbjct: 685 KAHPQVFNILLQILDDGRLTDSKGRVVNFKNTVIVMTSNIGSHIIYKM--------ESFG 736

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                    QG      ++ +     VQ  LK  F + EFL RI+E++ F P  K  L  
Sbjct: 737 --------FQGERKAGEVNENDMRSKVQASLKEQF-KPEFLNRIDELIIFHPLKKKILQQ 787

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  +L    K+ LD+ NI +    +V++ L   GYD  YGAR +K  ++ +++ +LA  
Sbjct: 788 IVELQLQLVQKR-LDEKNIKLKISNEVKSYLTTKGYDPTYGARPLKRVIQNEILDELALQ 846

Query: 560 HEKSVIGKGSFVRLYVQWSK 579
             +  +  G  V++ ++  K
Sbjct: 847 IIEKKVANGDSVKIVLENEK 866


>gi|423371256|ref|ZP_17348596.1| chaperone ClpB [Bacillus cereus AND1407]
 gi|401103082|gb|EJQ11067.1| chaperone ClpB [Bacillus cereus AND1407]
          Length = 866

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S  +      
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHL------ 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L   GE+ S +  S     G                   L+ HF R EFL R++EI+ F 
Sbjct: 732 LDGLGEDGSIKEESRELVMGQ------------------LRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|183235400|ref|XP_001914216.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
 gi|169800573|gb|EDS89008.1| hypothetical protein EHI_005657 [Entamoeba histolytica HM-1:IMSS]
          Length = 866

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/317 (38%), Positives = 192/317 (60%), Gaps = 33/317 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ R   LE  +  R++GQ+ A+  +S AI R   G  ++  P+  F+FLG SG+GKT
Sbjct: 555 QSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAAELF-DSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ + +MTSNL S  I +    
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIMK---- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G      +    K+ V++ I+K+ F+  EFL R+++I+ F 
Sbjct: 730 -------------------GVETTGQVKEEVKEQVME-IVKKSFK-PEFLNRMDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++  + V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVIG 566
           + VV+++     KS+IG
Sbjct: 829 KTVVTEIT----KSIIG 841


>gi|423638065|ref|ZP_17613718.1| chaperone ClpB [Bacillus cereus VD156]
 gi|401272025|gb|EJR78025.1| chaperone ClpB [Bacillus cereus VD156]
          Length = 866

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   + +I    +D +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEENGSIKEESRD-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAANEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|153003502|ref|YP_001377827.1| ATPase [Anaeromyxobacter sp. Fw109-5]
 gi|152027075|gb|ABS24843.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 890

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 214/358 (59%), Gaps = 28/358 (7%)

Query: 218 KDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAI 277
           +  S H PS   ED  +  ++ ++    A+  R +E +  R   +E+ L+ R+VGQE A+
Sbjct: 524 EQRSTHEPSVGPED--VAHVVSEWTGIPAEKLRVEEMQ--RLLEMERALEKRVVGQEEAL 579

Query: 278 NIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSE 336
             +S A++R   G  D   P+  FLFLG +G+GKTE A+ LA Y+  D+ EA IR DMSE
Sbjct: 580 RAVSEAVRRARTGLKDPSRPIGTFLFLGPTGVGKTETARALAEYLFNDE-EAMIRFDMSE 638

Query: 337 YQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDE 396
           +QE+H V++L+GAPPGY+G+++ G+LT+ +++ P +V+LFDE++KAHPDV  VLLQL D+
Sbjct: 639 FQERHTVSRLVGAPPGYVGYEEAGKLTEAVRRRPYSVLLFDEIEKAHPDVFNVLLQLMDD 698

Query: 397 GRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDV 456
           GRLTD KG+T+  K+ I V+TSN+ ++ +A                  ++  ++G +   
Sbjct: 699 GRLTDAKGRTVSFKNTIVVLTSNVGADALAYRT---------------TVGFTRGED--- 740

Query: 457 TISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDK 516
             +R  +D  ++ +  R   R EFL RI+EIV F P S+ ++  +V R L    +K L  
Sbjct: 741 EAARSMRDQAMEAL--RGAFRPEFLNRIDEIVVFHPLSREQMGGIVERLLESTRRK-LRG 797

Query: 517 HNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
            N+ + V    +  ++  G++  +GAR ++  ++R++ + ++    +  + +G+ +R+
Sbjct: 798 QNVTLEVTPAAIGGLVDRGFEPRFGARPLRRAIQRELETPISRMMLRGEVSEGARLRV 855


>gi|15835008|ref|NP_296767.1| ATP-dependent Clp protease, subunit B [Chlamydia muridarum Nigg]
 gi|270285175|ref|ZP_06194569.1| ATP-dependent Clp protease, subunit B [Chlamydia muridarum Nigg]
 gi|270289193|ref|ZP_06195495.1| ATP-dependent Clp protease, subunit B [Chlamydia muridarum Weiss]
 gi|301336570|ref|ZP_07224772.1| ATP-dependent Clp protease, subunit B [Chlamydia muridarum
           MopnTet14]
 gi|54035913|sp|Q9PKS5.1|CLPB_CHLMU RecName: Full=Chaperone protein ClpB
 gi|7190430|gb|AAF39246.1| ATP-dependent Clp protease, subunit B [Chlamydia muridarum Nigg]
          Length = 867

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 193/307 (62%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAITAVSDSIRSARVGLSDPQRPLGVFLFLGPTGVGKTELAKALAELLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A IR DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FD+G LTD K + + CK+A+F+MTSN+ S E+A +  +                
Sbjct: 688 NILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQELADYCAK---------------- 731

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
             +G+ +D    +     VV P LK +F   EF+ RI+EI+ F+P +  ++  +V  ++N
Sbjct: 732 --KGTIVD----KEAVLSVVAPALKNYF-SPEFINRIDEILPFVPLTTEDIVKIVGIQMN 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A + L++  I++ WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVALRLLERR-ISLTWDDSVVLFLSEQGYDGAFGARPLKRLIQQKVVTMLSKALLKGDIK 843

Query: 567 KGSFVRL 573
            G  V L
Sbjct: 844 SGMSVEL 850


>gi|218259782|ref|ZP_03475371.1| hypothetical protein PRABACTJOHN_01030 [Parabacteroides johnsonii
           DSM 18315]
 gi|423344442|ref|ZP_17322154.1| chaperone ClpB [Parabacteroides johnsonii CL02T12C29]
 gi|218224910|gb|EEC97560.1| hypothetical protein PRABACTJOHN_01030 [Parabacteroides johnsonii
           DSM 18315]
 gi|409212840|gb|EKN05874.1| chaperone ClpB [Parabacteroides johnsonii CL02T12C29]
          Length = 862

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 194/307 (63%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AI+ I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKEKLLHLESELHTRVIGQEEAISAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K TP   ++    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFEKMTP---ETHDQVVDET-----KIQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVER 550
           P ++ E+  +V  +LN   KK L ++ I + + D  +  I   G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVTVQLN-SVKKMLAQNGIALEFTDAALAFISDKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLA 557
            V+++L+
Sbjct: 829 YVLNELS 835


>gi|124025347|ref|YP_001014463.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
           [Prochlorococcus marinus str. NATL1A]
 gi|123960415|gb|ABM75198.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
           [Prochlorococcus marinus str. NATL1A]
          Length = 863

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/334 (37%), Positives = 202/334 (60%), Gaps = 30/334 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSS 306
           ++R  + E  +   LE +L+ R++GQ+ A+  IS+AI+R   G +D   P+  FLFLG +
Sbjct: 554 VKRLAQTEIEKLLNLESQLQKRVIGQDKAVQSISSAIQRSRTGLSDPSRPIASFLFLGPT 613

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL+K LA  +  D + A IR+DMSEY EKH +++LIGAPPGY+G++ GGQLT+ +
Sbjct: 614 GVGKTELSKALASQLF-DSENALIRIDMSEYMEKHSISRLIGAPPGYVGYEAGGQLTEAI 672

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P  V+LFDE++KAH DV  VLLQ+ DEGR+TDG+G+T   K+ I ++TSNL S  I+
Sbjct: 673 RRKPYCVLLFDEIEKAHKDVFNVLLQILDEGRVTDGQGRTTNFKNTIIILTSNLGSELIS 732

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
            +                 ++    +N+D  I++  K +           R EFL R++E
Sbjct: 733 DN----------------DVTNDPSTNIDELINQELKSNF----------RPEFLNRLDE 766

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIK 545
           I+ F P  K  L  +V  +LN   ++ L+   I +  + DV +++ + GY+  YGAR +K
Sbjct: 767 IINFEPLKKETLLKVVDLQLNRL-RERLEAKGIELEINDDVLSLITELGYNPSYGARPLK 825

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSK 579
             +++++ S++A    K    +GS +++  + SK
Sbjct: 826 RVIQKELESEIAKYILKGKYKEGSTIKIESKESK 859


>gi|92116299|ref|YP_576028.1| ATPase [Nitrobacter hamburgensis X14]
 gi|91799193|gb|ABE61568.1| ATPase AAA-2 [Nitrobacter hamburgensis X14]
          Length = 878

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 195/328 (59%), Gaps = 35/328 (10%)

Query: 233 NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWT 292
           NI Q++ ++     D   E E E+  +  +E+ L  R+VGQ  A+  +S A++R   G  
Sbjct: 535 NIAQVVSRWTGVPVDKMLEGEKEKLLR--MEESLAARVVGQSEAVRAVSTAVRRARAGLQ 592

Query: 293 DDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
           D + P+  F+FLG +G+GKTEL K LA Y+  D + A +R+DMSEY EKH VA+LIGAPP
Sbjct: 593 DPNRPMGSFMFLGPTGVGKTELTKALAAYLF-DNETAMVRIDMSEYMEKHSVARLIGAPP 651

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++
Sbjct: 652 GYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN 711

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPIL 471
            + +MTSNL S  +         EGE+    T ++ +                  V  ++
Sbjct: 712 TLIIMTSNLGSEFLVNQP-----EGED----TGAVREQ-----------------VMGMV 745

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA-KKALDKHNINIVWDIDVETI 530
           + HF R EFL R++EI+ F    KSE+  +V  E+ F   +K L+   I +  D      
Sbjct: 746 RAHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EIQFARLQKLLEDRKIVLDLDTAARDR 802

Query: 531 LAD-GYDVHYGARSIKHEVERQVVSQLA 557
           LA+ G+D  YGAR +K  ++R V   LA
Sbjct: 803 LAEKGWDPAYGARPLKRVIQRTVQDPLA 830


>gi|196037284|ref|ZP_03104595.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus NVH0597-99]
 gi|228913847|ref|ZP_04077472.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228944880|ref|ZP_04107243.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|196031526|gb|EDX70122.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus NVH0597-99]
 gi|228814908|gb|EEM61166.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228845786|gb|EEM90812.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 866

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|442322299|ref|YP_007362320.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Myxococcus
           stipitatus DSM 14675]
 gi|441489941|gb|AGC46636.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Myxococcus
           stipitatus DSM 14675]
          Length = 892

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 198/327 (60%), Gaps = 20/327 (6%)

Query: 252 KEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGK 310
           ++ E +R   +E  LK R+VGQE A+  IS A++R   G  D + P+  FLFLG +G+GK
Sbjct: 559 RQEEGQRLLEMEDALKQRVVGQEDALRAISEAVRRARAGLKDPNRPIGSFLFLGPTGVGK 618

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TE A+ LA Y+  D+  A IRLDMSE+QE+H V++LIGAPPGY+G+++ G+LT+ +++ P
Sbjct: 619 TETARALADYLFNDEA-AMIRLDMSEFQERHTVSRLIGAPPGYVGYEEAGRLTEAVRRRP 677

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL 430
            +V+LFDEV+KAHPDV  +LLQ+ D+GRLTD +G+T++ K+A+ +MTSNL          
Sbjct: 678 YSVLLFDEVEKAHPDVFNLLLQILDDGRLTDSRGRTVDFKNAVIIMTSNL---------- 727

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                G E      +    Q S  +    R      V   L+ HF R EF+ RI+EI+ F
Sbjct: 728 -----GSEAMGAARAAMGFQRSADEERTGRERARDAVMNALRGHF-RPEFINRIDEIIVF 781

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVE 549
            P +  +L  +V   L+   +K L   N+++ + D   +++   G++  YGAR ++  ++
Sbjct: 782 HPLNAEQLRRIVDSLLDATRRK-LHGQNLSLELTDAARDSLAERGFEPRYGARPLRRVIQ 840

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           R+V ++++    +  + +G  +R+  Q
Sbjct: 841 REVETEISRMLLRGEVSEGQRIRIDFQ 867


>gi|29840383|ref|NP_829489.1| ATP-dependent Clp protease, subunit B [Chlamydophila caviae GPIC]
 gi|54035821|sp|Q822Q4.1|CLPB_CHLCV RecName: Full=Chaperone protein ClpB
 gi|29834732|gb|AAP05367.1| ATP-dependent Clp protease, subunit B [Chlamydophila caviae GPIC]
          Length = 864

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 128/315 (40%), Positives = 200/315 (63%), Gaps = 29/315 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI+ +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAISAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G   SK T    
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYC---AKKGSRVSKET---- 740

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                     +S      VV P LK++F   EF+ RI++I+ F+P +  ++  +V  ++ 
Sbjct: 741 ---------VLS------VVAPTLKKYF-SPEFINRIDDILPFVPLNTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRLLERR-VTLTWDDSVILYLSEQGYDSSFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRLYVQWSKEV 581
             + + L +  SK+V
Sbjct: 844 SDTSIELTM--SKDV 856


>gi|419753033|ref|ZP_14279437.1| ATPase [Pseudomonas aeruginosa PADK2_CF510]
 gi|420139539|ref|ZP_14647370.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
           aeruginosa CIG1]
 gi|384400155|gb|EIE46514.1| ATPase [Pseudomonas aeruginosa PADK2_CF510]
 gi|403247736|gb|EJY61361.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Pseudomonas
           aeruginosa CIG1]
          Length = 949

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 129/318 (40%), Positives = 197/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EF+ RI+EI+ F 
Sbjct: 777 RGAAGEEYEK-----TKAE----------------VMDVLRSHF-RPEFINRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|183233250|ref|XP_001913827.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
 gi|169801663|gb|EDS89397.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 866

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/317 (38%), Positives = 192/317 (60%), Gaps = 33/317 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ R   LE  +  R++GQ+ A+  +S AI R   G  ++  P+  F+FLG SG+GKT
Sbjct: 555 QSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAAELF-DSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ + +MTSNL S  I      
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIM----- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G      +    K+ V++ I+K+ F + EFL R+++I+ F 
Sbjct: 729 ------------------KGVETTGQVDEQVKEQVME-IVKKSF-KPEFLNRMDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++  + V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVIG 566
           + VV+++     KS+IG
Sbjct: 829 KTVVTEIT----KSIIG 841


>gi|152973457|ref|YP_001338508.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|296104033|ref|YP_003614179.1| ATPase [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|380083243|ref|YP_005351258.1| chaperone ATPase [Klebsiella pneumoniae]
 gi|419976211|ref|ZP_14491612.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH1]
 gi|419982068|ref|ZP_14497335.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH2]
 gi|419987611|ref|ZP_14502727.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH4]
 gi|419993475|ref|ZP_14508415.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH5]
 gi|419999395|ref|ZP_14514170.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH6]
 gi|420005258|ref|ZP_14519883.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH7]
 gi|420010920|ref|ZP_14525385.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH8]
 gi|420016708|ref|ZP_14530996.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH9]
 gi|420022501|ref|ZP_14536668.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH10]
 gi|420028229|ref|ZP_14542210.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
 gi|420034070|ref|ZP_14547864.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
 gi|420039602|ref|ZP_14553233.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
 gi|420045582|ref|ZP_14559047.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
 gi|420051299|ref|ZP_14564587.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
 gi|420057063|ref|ZP_14570210.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
 gi|420062373|ref|ZP_14575347.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
 gi|420068381|ref|ZP_14581161.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
 gi|420073763|ref|ZP_14586384.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
 gi|420080227|ref|ZP_14592655.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
 gi|420084718|ref|ZP_14596968.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
 gi|425084431|ref|ZP_18487526.1| hypothetical protein HMPREF1306_05236 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW2]
 gi|428936892|ref|ZP_19010254.1| chaperone ATPase [Klebsiella pneumoniae JHCK1]
 gi|428942019|ref|ZP_19015038.1| chaperone ATPase [Klebsiella pneumoniae VA360]
 gi|442557562|ref|YP_007366492.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Klebsiella
           pneumoniae]
 gi|449307397|ref|YP_007439753.1| chaperone ATPase [Cronobacter sakazakii SP291]
 gi|150958249|gb|ABR80278.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|295058492|gb|ADF63230.1| ATPase with chaperone activity [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|356596035|gb|AET17085.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
           pneumoniae]
 gi|397341222|gb|EJJ34406.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH1]
 gi|397341409|gb|EJJ34588.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH2]
 gi|397343913|gb|EJJ37053.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH4]
 gi|397358159|gb|EJJ50886.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH6]
 gi|397358357|gb|EJJ51079.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH5]
 gi|397362499|gb|EJJ55148.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH7]
 gi|397374504|gb|EJJ66835.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH9]
 gi|397377252|gb|EJJ69487.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH8]
 gi|397384213|gb|EJJ76334.1| ATPase with chaperone activity [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH10]
 gi|397391916|gb|EJJ83734.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
 gi|397393358|gb|EJJ85117.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
 gi|397402600|gb|EJJ94197.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
 gi|397409384|gb|EJK00699.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
 gi|397409495|gb|EJK00808.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
 gi|397419954|gb|EJK11065.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
 gi|397426491|gb|EJK17308.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
 gi|397428309|gb|EJK19052.1| ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
 gi|397437505|gb|EJK28067.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
 gi|397441959|gb|EJK32321.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
 gi|397449894|gb|EJK40014.1| chaperone ATPase [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
 gi|405596937|gb|EKB70255.1| hypothetical protein HMPREF1306_05236 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW2]
 gi|426297405|gb|EKV59906.1| chaperone ATPase [Klebsiella pneumoniae JHCK1]
 gi|426299433|gb|EKV61770.1| chaperone ATPase [Klebsiella pneumoniae VA360]
 gi|440685610|gb|AGC23577.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Klebsiella
           pneumoniae]
 gi|449097430|gb|AGE85464.1| chaperone ATPase [Cronobacter sakazakii SP291]
          Length = 931

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 196/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+        K++   +DV              L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEY-------EKTKAGVMDV--------------LRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|183236943|ref|XP_001914546.1| chaperone clpB [Entamoeba histolytica HM-1:IMSS]
 gi|169799508|gb|EDS88678.1| chaperone clpB, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 314

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/317 (38%), Positives = 192/317 (60%), Gaps = 33/317 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ R   LE  +  R++GQ+ A+  +S AI R   G  ++  P+  F+FLG SG+GKT
Sbjct: 3   QSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGVGKT 62

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 63  ELAKALAAELF-DSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRPY 121

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ + +MTSNL S  I +    
Sbjct: 122 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIMK---- 177

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G      +    K+ V++ I+K+ F+  EFL R+++I+ F 
Sbjct: 178 -------------------GVETTGQVDEQVKEQVME-IVKKSFK-PEFLNRMDDIIVFS 216

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++  + V   +  +E I+  GY + YGAR ++  +E
Sbjct: 217 PLSEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIE 276

Query: 550 RQVVSQLAAAHEKSVIG 566
           + VV+++     KS+IG
Sbjct: 277 KTVVTEIT----KSIIG 289


>gi|161525461|ref|YP_001580473.1| ATPase [Burkholderia multivorans ATCC 17616]
 gi|160342890|gb|ABX15976.1| ATPase AAA-2 domain protein [Burkholderia multivorans ATCC 17616]
          Length = 566

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 198/318 (62%), Gaps = 33/318 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 216 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 275

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 276 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 334

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 335 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 393

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +KS+                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 394 RGAAGEEYEK-----TKSE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 431

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K    R
Sbjct: 432 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLSFDQTLIDHFAEEGYKPEFGARELK----R 486

Query: 551 QVVSQLAAAHEKSVIGKG 568
            + S+L  A  + ++G G
Sbjct: 487 LIRSELETALAREMLGGG 504


>gi|425094865|ref|ZP_18497946.1| hypothetical protein HMPREF1308_05182 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW5]
 gi|405609330|gb|EKB82208.1| hypothetical protein HMPREF1308_05182 [Klebsiella pneumoniae subsp.
           pneumoniae WGLW5]
          Length = 931

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 196/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+        K++   +DV              L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEY-------EKTKAGVMDV--------------LRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|423552996|ref|ZP_17529323.1| chaperone ClpB [Bacillus cereus ISP3191]
 gi|401184722|gb|EJQ91820.1| chaperone ClpB [Bacillus cereus ISP3191]
          Length = 866

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|329996080|ref|ZP_08302384.1| negative regulator of genetic competence ClpC/MecB [Klebsiella sp.
           MS 92-3]
 gi|328539505|gb|EGF65506.1| negative regulator of genetic competence ClpC/MecB [Klebsiella sp.
           MS 92-3]
 gi|359730359|gb|AEV55104.1| ATPase with chaperone activity, ATP-binding subunit [Klebsiella
           pneumoniae]
          Length = 949

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 196/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 617 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 676

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 677 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 735

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 736 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 794

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+        K++   +DV              L+ HF R EFL RI+EI+ F 
Sbjct: 795 RGAAGEEY-------EKTKAGVMDV--------------LRGHF-RPEFLNRIDEIIVFH 832

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 833 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 891

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 892 ELETALAREMLGGGIGKG 909


>gi|334364591|ref|ZP_08513573.1| ATP-dependent chaperone protein ClpB [Alistipes sp. HGB5]
 gi|313159181|gb|EFR58554.1| ATP-dependent chaperone protein ClpB [Alistipes sp. HGB5]
          Length = 872

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 193/307 (62%), Gaps = 23/307 (7%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A ER K   +E  L  R++GQE AI  IS A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 559 ASEREKLLHMEDELHRRVIGQEQAIAAISDAVRRSRAGLNDPRKPIGSFIFLGTTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D      R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ELAKALAEFLFNDDS-MMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+T++ ++ I +MTSN+ S+ I Q    
Sbjct: 678 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFRNTIIIMTSNMGSH-IIQENFA 736

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GE+ +   P + +   + +DV             +LK+   + EFL RI+EIV F 
Sbjct: 737 AAFSGEKLA---PEVVEK--TRMDVI-----------DLLKQQL-KPEFLNRIDEIVMFE 779

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVER 550
           P ++ ++  +V  +L    ++ L ++ I + + D   E I A GYD  YGAR +K  ++R
Sbjct: 780 PLTRRDIERIVDIQLG-AVRRMLAENGIRLEYSDKAREWIAAAGYDPLYGARPVKRTIQR 838

Query: 551 QVVSQLA 557
            +V++L+
Sbjct: 839 YIVNELS 845


>gi|260903275|ref|ZP_05911670.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           AQ4037]
 gi|308107960|gb|EFO45500.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           AQ4037]
          Length = 823

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 190/306 (62%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E  L +R+VGQ  A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 519 EAEKEKLLRMEDVLHNRVVGQSEAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 578

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 579 ELCKTLASFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 637

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I ++   
Sbjct: 638 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAT 697

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G             +   +DV +S+HF              R EFL R++EIV F 
Sbjct: 698 LDYQG------------IKSEVMDV-VSKHF--------------RPEFLNRVDEIVVFH 730

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +  + ++   +L   AK+  +K     V D  ++ I   G+D  YGAR +K  +++ 
Sbjct: 731 PLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGARPLKRAIQQN 790

Query: 552 VVSQLA 557
           V + LA
Sbjct: 791 VENPLA 796


>gi|228932547|ref|ZP_04095428.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827237|gb|EEM72990.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 866

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|229195470|ref|ZP_04322238.1| Chaperone protein clpB 1 [Bacillus cereus m1293]
 gi|423607027|ref|ZP_17582920.1| chaperone ClpB [Bacillus cereus VD102]
 gi|228588010|gb|EEK46060.1| Chaperone protein clpB 1 [Bacillus cereus m1293]
 gi|401241217|gb|EJR47609.1| chaperone ClpB [Bacillus cereus VD102]
          Length = 866

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|118476751|ref|YP_893902.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis str. Al Hakam]
 gi|196044324|ref|ZP_03111560.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus 03BB108]
 gi|225863123|ref|YP_002748501.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus 03BB102]
 gi|229183474|ref|ZP_04310699.1| Chaperone protein clpB 1 [Bacillus cereus BGSC 6E1]
 gi|118415976|gb|ABK84395.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis str. Al Hakam]
 gi|196024963|gb|EDX63634.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus 03BB108]
 gi|225789526|gb|ACO29743.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus 03BB102]
 gi|228600058|gb|EEK57653.1| Chaperone protein clpB 1 [Bacillus cereus BGSC 6E1]
          Length = 866

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|423217588|ref|ZP_17204084.1| chaperone ClpB [Bacteroides caccae CL03T12C61]
 gi|392628747|gb|EIY22773.1| chaperone ClpB [Bacteroides caccae CL03T12C61]
          Length = 862

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 187/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK+   R EFL RI+E + FLP +++E+  
Sbjct: 727 -----MEKLNGSNKEEVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTENEIRQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + + + D  +  +   GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-SVQKMLAENGVELEMTDAALNFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|301052812|ref|YP_003791023.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Bacillus
           cereus biovar anthracis str. CI]
 gi|423577002|ref|ZP_17553121.1| chaperone ClpB [Bacillus cereus MSX-D12]
 gi|300374981|gb|ADK03885.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus biovar anthracis str. CI]
 gi|401206173|gb|EJR12966.1| chaperone ClpB [Bacillus cereus MSX-D12]
          Length = 866

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|319790046|ref|YP_004151679.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
 gi|317114548|gb|ADU97038.1| ATPase AAA-2 domain protein [Thermovibrio ammonificans HB-1]
          Length = 847

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 204/337 (60%), Gaps = 36/337 (10%)

Query: 252 KEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGK 310
           +E E ++   +E+ L  R++GQE AI  IS AI+R   G    + PL  FLFLG +G+GK
Sbjct: 508 QEEEIKKLLRMEEELHKRVIGQERAIKAISEAIRRARAGLQPPNRPLGSFLFLGPTGVGK 567

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TELAK LA Y+  D+  A IRLDMSEY EKH V+KLIGAPPGY+G+++GGQLT+ +++ P
Sbjct: 568 TELAKALAEYLFGDES-AIIRLDMSEYMEKHAVSKLIGAPPGYVGYEEGGQLTEAVRRKP 626

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL 430
            +V+L DE++KAHPDV  +LLQ+ D+GRLTD KG+T++  + + +MTSN+ S    ++ +
Sbjct: 627 YSVILLDEIEKAHPDVFNILLQILDDGRLTDAKGRTVDFSNTVIIMTSNVGS----EYLM 682

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
            L K  EEF K           N D       K+ +++  LKR F R EFL RI+EI+ F
Sbjct: 683 NLSK--EEFEK-----------NYD-----KIKEQIMEE-LKRRF-RPEFLNRIDEIIIF 722

Query: 491 LPFSKSELHTLV---CRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKH 546
            P ++ E+  +V     +LN    K L++  I +      ++ LA  GY   +GAR ++ 
Sbjct: 723 HPLAEEEIKKIVDLLIAKLN----KRLEERGIKVKLTEAAKSELAKRGYVPEFGARPLRR 778

Query: 547 EVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
            ++R+V + L+    +  + +G  V   V + KE  E
Sbjct: 779 TIQREVETPLSVKILEGSVKEGDTV--VVDYDKEKGE 813


>gi|28897335|ref|NP_796940.1| ClpB protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839763|ref|ZP_01992430.1| chaperone ClpB [Vibrio parahaemolyticus AQ3810]
 gi|260364016|ref|ZP_05776747.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           K5030]
 gi|260876298|ref|ZP_05888653.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           AN-5034]
 gi|260895105|ref|ZP_05903601.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           Peru-466]
 gi|417321417|ref|ZP_12107957.1| ClpB protein [Vibrio parahaemolyticus 10329]
 gi|433656841|ref|YP_007274220.1| ClpB protein [Vibrio parahaemolyticus BB22OP]
 gi|54035833|sp|Q87S63.1|CLPB_VIBPA RecName: Full=Chaperone protein ClpB
 gi|28805544|dbj|BAC58824.1| ClpB protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746716|gb|EDM57704.1| chaperone ClpB [Vibrio parahaemolyticus AQ3810]
 gi|308088902|gb|EFO38597.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           Peru-466]
 gi|308092911|gb|EFO42606.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           AN-5034]
 gi|308115632|gb|EFO53172.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           K5030]
 gi|328472097|gb|EGF42974.1| ClpB protein [Vibrio parahaemolyticus 10329]
 gi|432507529|gb|AGB09046.1| ClpB protein [Vibrio parahaemolyticus BB22OP]
          Length = 857

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 190/306 (62%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E  L +R+VGQ  A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEDVLHNRVVGQSEAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLASFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAT 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G             +   +DV +S+HF              R EFL R++EIV F 
Sbjct: 732 LDYQG------------IKSEVMDV-VSKHF--------------RPEFLNRVDEIVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +  + ++   +L   AK+  +K     V D  ++ I   G+D  YGAR +K  +++ 
Sbjct: 765 PLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGARPLKRAIQQN 824

Query: 552 VVSQLA 557
           V + LA
Sbjct: 825 VENPLA 830


>gi|423326900|ref|ZP_17304708.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CCUG 3837]
 gi|404607470|gb|EKB06972.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CCUG 3837]
          Length = 862

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 188/307 (61%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  IS A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLHLEDELHKRVVGQEEAIEAISDAVRRSRAGLQDPKKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEY E+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYGERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F   T     S+ + ++V      K  V          R EFL RI+E+V F 
Sbjct: 725 -----EKFENATNMEQASEDAKVEVL--NELKQQV----------RPEFLNRIDEVVMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P SK+ +  +V  +L     K L + NI++    + +  LA  G+D  +GAR +K  V++
Sbjct: 768 PLSKNNILQIVDIQLQ-SVFKMLAQQNIHMEATAEAKEFLATKGFDPEFGARPVKRVVQK 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNRLS 833


>gi|294648540|ref|ZP_06726012.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292825581|gb|EFF84312.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 468

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 197/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 118 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 177

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 178 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 236

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 237 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 295

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +KS+                V  +L+ HF R EF+ RI+EI+ F 
Sbjct: 296 RSAAGEEYEK-----TKSE----------------VMDVLRGHF-RPEFINRIDEIIVFH 333

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 334 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 392

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 393 ELETALAREMLGGGIGKG 410


>gi|262273641|ref|ZP_06051454.1| ClpB protein [Grimontia hollisae CIP 101886]
 gi|262222056|gb|EEY73368.1| ClpB protein [Grimontia hollisae CIP 101886]
          Length = 857

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/348 (36%), Positives = 208/348 (59%), Gaps = 33/348 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L +  +    + +  E E+ +   +E  L  R++GQE A+  ++ AI+R   G
Sbjct: 533 DAEIAEVLSR--QTGIPVAKMLEGEKEKLLHMEDELHSRVIGQEEAVTSVANAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH VA+L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKSLAEFLF-DSSDAMVRIDMSEFMEKHSVARLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNLLLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++A+ +MTSNL S+ I +H  +L   G             +   +DV +S+HF       
Sbjct: 710 RNAVVIMTSNLGSDRIQEHFGELDYSG------------IKAMVMDV-VSKHF------- 749

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
                  R EF+ R++E V F P  +  + ++   +L   AK+  ++  I  V D +  T
Sbjct: 750 -------RPEFINRVDESVVFHPLGQEHIKSIASIQLAHLAKRMAERDLILEVTD-EALT 801

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           ++AD G+D  YGAR +K  +++ V + LA +  +  +     V+L V+
Sbjct: 802 LIADAGFDPVYGARPLKRAIQQSVENPLAQSILRGEVKPSLPVKLIVE 849


>gi|302337451|ref|YP_003802657.1| ATP-dependent chaperone ClpB [Spirochaeta smaragdinae DSM 11293]
 gi|301634636|gb|ADK80063.1| ATP-dependent chaperone ClpB [Spirochaeta smaragdinae DSM 11293]
          Length = 864

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 194/307 (63%), Gaps = 35/307 (11%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A E  KY  LE  L+ R+VGQ+ AI  +S AI+R + G +D+  PL  F+F+G +G+GKT
Sbjct: 556 ASEMAKYLQLESTLEKRVVGQKEAIRAVSDAIRRNKTGLSDEARPLGSFIFIGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D++ A  R+DMSEY EKH V++LIGAPPGY+G+D GGQLT+ +++ P 
Sbjct: 616 ELARTLADFLFDDER-ALTRIDMSEYMEKHAVSRLIGAPPGYVGYDQGGQLTEAVRRRPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  ++LQL D+GRLTDG+G+ ++ ++AI +MTSN+ S+ I Q A  
Sbjct: 675 SVVLFDEIEKAHPDVFNIMLQLLDDGRLTDGQGRLVDFRNAIIIMTSNIGSDLILQAA-- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +G+E +++                        V  +++  F + EFL R++EI+ F 
Sbjct: 733 ---DGDEINEK------------------------VHQLMRATF-KPEFLNRVDEIITFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              K E+ ++V  +L    ++   +H I++V     + +LA  GYD  +GAR +K  ++ 
Sbjct: 765 RLGKEEILSIVDIQLERLERRLASQH-ISLVLKPKAKELLASLGYDPAFGARPVKRTIQN 823

Query: 551 QVVSQLA 557
            + +QLA
Sbjct: 824 LLQNQLA 830


>gi|417902906|ref|ZP_12546767.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21269]
 gi|341850525|gb|EGS91643.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21269]
          Length = 818

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|332665301|ref|YP_004448089.1| ATPase AAA [Haliscomenobacter hydrossis DSM 1100]
 gi|332334115|gb|AEE51216.1| ATPase AAA-2 domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 898

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 192/307 (62%), Gaps = 21/307 (6%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE+ +  R++GQ+ A+  +S AI+R   G  D D P+  F+FLG +G+GKT
Sbjct: 552 QSEKDKLLSLEKEIGQRLIGQDEAVKAVSDAIRRSRAGLQDADRPIGSFIFLGPTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK +A  +  D+K A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 612 ELAKTIAEVLFDDEK-AMTRIDMSEYQEKHTVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +++L DE++KAHPD   +LLQ+ D+GRLTD KG+    K+ I +MTSN+ S+ I ++   
Sbjct: 671 SIILLDEIEKAHPDTFNILLQVLDDGRLTDNKGRVANFKNTIIIMTSNMGSDLIMENFDD 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L + GE+      + +K +  NL                LK +  R EFL RI+E + FL
Sbjct: 731 LEEMGEKHRTEIIATTKEEVFNL----------------LKENL-RPEFLNRIDEQILFL 773

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +KSE+  ++   L    +K L K  I +      + +LAD GYD  +GAR +K  +++
Sbjct: 774 PLNKSEIKQILDLLLK-KTQKMLAKQGIILKVSDPAKDLLADMGYDPQFGARPMKRVLQK 832

Query: 551 QVVSQLA 557
            V+++L+
Sbjct: 833 DVINELS 839


>gi|67473761|ref|XP_652630.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
 gi|183233638|ref|XP_001913888.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
 gi|183235644|ref|XP_001914274.1| heat shock protein [Entamoeba histolytica HM-1:IMSS]
 gi|56469501|gb|EAL47244.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
 gi|169800435|gb|EDS88950.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
 gi|169801477|gb|EDS89337.1| heat shock protein, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 866

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 122/317 (38%), Positives = 192/317 (60%), Gaps = 33/317 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ R   LE  +  R++GQ+ A+  +S AI R   G  ++  P+  F+FLG SG+GKT
Sbjct: 555 QSEKARLLNLESEIHKRVIGQDEAVTAVSDAIIRSRGGLGNEKRPIGSFMFLGPSGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ELAKALAAELF-DSEENIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP V  VLLQL DEGRLTDG+G+T++ K+ + +MTSNL S  I +    
Sbjct: 674 SVILFDEIEKAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTVVIMTSNLGSEIIMK---- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G      +    K+ V++ I+K+ F+  EFL R+++I+ F 
Sbjct: 730 -------------------GVETTGQVDEQVKEQVME-IVKKSFK-PEFLNRMDDIIVFS 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIV--WDIDVETILADGYDVHYGARSIKHEVE 549
           P S+ EL  +V  ++    K    ++  + V   +  +E I+  GY + YGAR ++  +E
Sbjct: 769 PLSEKELKEIVKLQMGEVIKVIKKRYPGSEVEMTEAAIEGIIKAGYSIAYGARPMRRYIE 828

Query: 550 RQVVSQLAAAHEKSVIG 566
           + VV+++     KS+IG
Sbjct: 829 KTVVTEIT----KSIIG 841


>gi|198283746|ref|YP_002220067.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665588|ref|YP_002426377.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248267|gb|ACH83860.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517801|gb|ACK78387.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 866

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 196/328 (59%), Gaps = 29/328 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E+ +   +E+RL+ R+VGQ  A+  +S AI+R   G +D   P   FLFLG +G+GKT
Sbjct: 558 EGEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRAGLSDPKRPNGSFLFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++  +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 618 ELTKALAEFLF-DSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHP+V  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S+ I      
Sbjct: 677 SVVLLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRI------ 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                +EFS+      K +  ++ V +    +DH           R EFL RI+E+V F 
Sbjct: 731 -----QEFSR------KGEYDSMRVAVLDVVQDHF----------RPEFLNRIDELVIFR 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  +L  +   ++ F   +  ++    ++ D  ++ +   GYD  YGAR +K  ++R+
Sbjct: 770 PLTAVQLREITGIQMGFLRSRLRERDMDLVLSDGALDHLAEVGYDPVYGARPLKRVIQRE 829

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSK 579
           + + LA    +   G G  + + ++  +
Sbjct: 830 IENPLAQKLLRGDFGPGEIIEVVLEGDR 857


>gi|255022127|ref|ZP_05294130.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
 gi|340782895|ref|YP_004749502.1| ClpB protein [Acidithiobacillus caldus SM-1]
 gi|254968391|gb|EET25950.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
 gi|340557046|gb|AEK58800.1| ClpB protein [Acidithiobacillus caldus SM-1]
          Length = 865

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 124/337 (36%), Positives = 201/337 (59%), Gaps = 33/337 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E+RL+ R+VGQ+ A+  ++ AI+R   G  D   P+  FLFLG +G+GKT
Sbjct: 557 EGEKEKLLKMEERLRARVVGQDEAVTAVANAIRRSRAGLADPRRPIGSFLFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++  +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALAEFLF-DSEDHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHP+V  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S+ I ++   
Sbjct: 676 SVILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEYG-- 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                     R   +   +G+ ++V +  HF              R EFL RI+E+V F 
Sbjct: 734 ----------RLGDVEGMRGAVMEV-VQGHF--------------RPEFLNRIDELVIFQ 768

Query: 492 PFSKSELHTLVCRELNFWAKKA-LDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVE 549
           P S+ +L  +   E+   + +A L + +++IV  D  V  +   G+D  YGAR +K  ++
Sbjct: 769 PLSRQQLRAIA--EIQMGSLRARLRERDLDIVLSDAAVNLLAETGFDPVYGARPLKRVIQ 826

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSA 586
           R++ + LA    +     G  + +  Q  + V   SA
Sbjct: 827 REIENPLAQRLLRGEFAPGQVIHVDAQGGQFVFGPSA 863


>gi|298384357|ref|ZP_06993917.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 1_1_14]
 gi|298262636|gb|EFI05500.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 1_1_14]
          Length = 862

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 186/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK+   R EFL RI+E + FLP +++E+  
Sbjct: 727 -----MEKLSGSNKEEVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTETEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + + + D  +  +   GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-GVQKMLAENGVELEMTDAALSFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|308272261|emb|CBX28867.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
 gi|308272381|emb|CBX28986.1| Chaperone protein clpB [uncultured Desulfobacterium sp.]
          Length = 860

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 131/349 (37%), Positives = 206/349 (59%), Gaps = 34/349 (9%)

Query: 230 EDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKEN 289
           +D +I +++ K+      +++  E+E  +   +E RL  R++GQ+ A+  +S A++R  +
Sbjct: 535 DDEDIAEVISKWT--GIPVRKMLESEREKLVRMEDRLAMRVIGQDEALEAVSNAVRRARS 592

Query: 290 GWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIG 348
           G  D + P+  F+F+G +G+GKTELAK LA +I  D ++A +R+DMSEY EKH V++LIG
Sbjct: 593 GMQDPNRPIGSFIFMGPTGVGKTELAKALAEFIF-DSEQAMVRIDMSEYMEKHAVSRLIG 651

Query: 349 APPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIE 408
           APPGY+G+D+GG LT+ +++ P +VVLFDE++KAHP+V  VLLQ+ D+GR+TDG G+T++
Sbjct: 652 APPGYVGYDEGGYLTEAVRRKPYSVVLFDEIEKAHPEVFNVLLQILDDGRMTDGHGRTVD 711

Query: 409 CKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQ 468
            K+ I +MTSN+ S  I +  +  RKE EE                            V 
Sbjct: 712 FKNTIIIMTSNVGSQWIQELGISRRKEMEER---------------------------VT 744

Query: 469 PILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-V 527
             LK  F + EFL RI+E + F   S  ++  +V  ++     +  +K NI +V   D V
Sbjct: 745 EALKASF-KPEFLNRIDETIIFHNLSPEQIGEIVKIQIKKLEARLAEK-NIKLVLSDDAV 802

Query: 528 ETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + I+  GYD  YGAR +K  +++ + + L+    K  I  GS V   VQ
Sbjct: 803 KLIVEKGYDPVYGARPLKRAIQKYLENPLSIEILKGEIQDGSIVLAEVQ 851


>gi|421470644|ref|ZP_15919011.1| Clp amino terminal domain protein [Burkholderia multivorans ATCC
           BAA-247]
 gi|400227397|gb|EJO57403.1| Clp amino terminal domain protein [Burkholderia multivorans ATCC
           BAA-247]
          Length = 949

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 198/318 (62%), Gaps = 33/318 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEYEK-----TKTE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K    R
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLAFDQTLIDHFAEEGYKPEFGARELK----R 869

Query: 551 QVVSQLAAAHEKSVIGKG 568
            + S+L  A  + ++G G
Sbjct: 870 LIRSELETALAREMLGGG 887


>gi|153807767|ref|ZP_01960435.1| hypothetical protein BACCAC_02050 [Bacteroides caccae ATCC 43185]
 gi|149129376|gb|EDM20590.1| ATP-dependent chaperone protein ClpB [Bacteroides caccae ATCC
           43185]
          Length = 862

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 187/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK+   R EFL RI+E + FLP +++E+  
Sbjct: 727 -----MEKLNGSNKEEVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTENEIRQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + + + D  +  +   GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-SVQKMLAENGVELEMTDAALNFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|423222307|ref|ZP_17208777.1| chaperone ClpB [Bacteroides cellulosilyticus CL02T12C19]
 gi|392642965|gb|EIY36724.1| chaperone ClpB [Bacteroides cellulosilyticus CL02T12C19]
          Length = 862

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/298 (39%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSAYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  G+N +  I    K+  V  +LK+   R EFL RI+E + FLP ++SE+  
Sbjct: 727 -----MEKLNGTNKEQVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLNESEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ +  I+ D  +E +   GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-GVQKMLAQNGVELILTDGAIEFLTKVGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|289209193|ref|YP_003461259.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
 gi|288944824|gb|ADC72523.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
          Length = 862

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 198/323 (61%), Gaps = 31/323 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E+ +   +E+ +  R+VGQ  A+N ++ AI+R   G +D + P   FLFLG +G+GKT
Sbjct: 553 EGEKDKLLRMEEAIGARVVGQSEAVNAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELTKALASFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYIGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  VLLQ+ D+GRLTDG G+T++ ++ + VMTSNL S +I + A  
Sbjct: 672 SVILLDEVEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSQQIQEMA-- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GEE              N D   +       V  I+ +HF R EF+ R++++V F 
Sbjct: 730 ----GEE--------------NYDAMKA------AVMEIVGQHF-RPEFINRVDDVVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P  + ++  +   +L +  +K L++ +++I + D  ++ + A G+D  YGAR +K  ++ 
Sbjct: 765 PLEREQIRAIADIQLQYL-RKRLEERDLSITITDAALDHLGAAGFDPVYGARPLKRAIQT 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
           Q+ + LA +      G G  + +
Sbjct: 824 QLENPLAQSLLAGEFGPGDTIEV 846


>gi|85713565|ref|ZP_01044555.1| AAA ATPase [Nitrobacter sp. Nb-311A]
 gi|85699469|gb|EAQ37336.1| AAA ATPase [Nitrobacter sp. Nb-311A]
          Length = 878

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 196/328 (59%), Gaps = 35/328 (10%)

Query: 233 NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWT 292
           NI Q++ ++     D   E E E+  +  +E+ L  R+VGQ  A+  ++ A++R   G  
Sbjct: 535 NIAQVVSRWTGVPVDKMLEGEKEKLLR--MEESLAARVVGQGEAVRAVATAVRRARAGLQ 592

Query: 293 DDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
           D + P+  F+FLG +G+GKTEL K LA Y+  D + A +R+DMSEY EKH VA+LIGAPP
Sbjct: 593 DPNRPMGSFMFLGPTGVGKTELTKALAAYLF-DDETAMVRIDMSEYMEKHSVARLIGAPP 651

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++
Sbjct: 652 GYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN 711

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPIL 471
            + +MTSNL S  +         EGE+    T ++ +                  V  ++
Sbjct: 712 TLIIMTSNLGSEFLVNQ-----PEGED----TGAVREQ-----------------VMGMV 745

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA-KKALDKHNINIVWDIDVETI 530
           + HF R EFL R++EI+ F    KSE+  +V  ++ F   ++ LD   I +  D     +
Sbjct: 746 RAHF-RPEFLNRVDEIILFHRLQKSEMGRIV--DIQFARLQRLLDDRKIVLDLDAAARDL 802

Query: 531 LAD-GYDVHYGARSIKHEVERQVVSQLA 557
           LA+ G+D  YGAR +K  ++R V   LA
Sbjct: 803 LAERGWDPAYGARPLKRVIQRSVQDPLA 830


>gi|15923515|ref|NP_371049.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926202|ref|NP_373735.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
 gi|49482754|ref|YP_039978.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49485389|ref|YP_042610.1| stress response-related Clp ATPase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|87161024|ref|YP_493213.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|88194286|ref|YP_499078.1| endopeptidase [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|148266984|ref|YP_001245927.1| ATPase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393031|ref|YP_001315706.1| ATPase [Staphylococcus aureus subsp. aureus JH1]
 gi|151220699|ref|YP_001331521.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156978853|ref|YP_001441112.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161508764|ref|YP_001574423.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141039|ref|ZP_03565532.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253731128|ref|ZP_04865293.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253732532|ref|ZP_04866697.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255005318|ref|ZP_05143919.2| endopeptidase [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257795377|ref|ZP_05644356.1| endopeptidase [Staphylococcus aureus A9781]
 gi|258408936|ref|ZP_05681217.1| endopeptidase [Staphylococcus aureus A9763]
 gi|258420427|ref|ZP_05683370.1| endopeptidase [Staphylococcus aureus A9719]
 gi|258439347|ref|ZP_05690279.1| endopeptidase [Staphylococcus aureus A9299]
 gi|258444087|ref|ZP_05692424.1| endopeptidase [Staphylococcus aureus A8115]
 gi|258446355|ref|ZP_05694513.1| endopeptidase [Staphylococcus aureus A6300]
 gi|258448448|ref|ZP_05696563.1| endopeptidase [Staphylococcus aureus A6224]
 gi|258452743|ref|ZP_05700741.1| endopeptidase [Staphylococcus aureus A5948]
 gi|258453804|ref|ZP_05701778.1| endopeptidase [Staphylococcus aureus A5937]
 gi|269202147|ref|YP_003281416.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
 gi|282894957|ref|ZP_06303180.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus A8117]
 gi|282903112|ref|ZP_06311003.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus C160]
 gi|282904902|ref|ZP_06312760.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282907852|ref|ZP_06315687.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910165|ref|ZP_06317969.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282918312|ref|ZP_06326049.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus C427]
 gi|282928860|ref|ZP_06336451.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus A10102]
 gi|283957322|ref|ZP_06374775.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|284023534|ref|ZP_06377932.1| ClpA-related protein [Staphylococcus aureus subsp. aureus 132]
 gi|294850300|ref|ZP_06791034.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus A9754]
 gi|295406901|ref|ZP_06816704.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus A8819]
 gi|295427062|ref|ZP_06819698.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|297208762|ref|ZP_06925190.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297246275|ref|ZP_06930124.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus A8796]
 gi|297590586|ref|ZP_06949225.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
 gi|304381877|ref|ZP_07364524.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|379013806|ref|YP_005290042.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
 gi|379020295|ref|YP_005296957.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus aureus subsp. aureus M013]
 gi|384549389|ref|YP_005738641.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|384861187|ref|YP_005743907.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|384863853|ref|YP_005749212.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|384868552|ref|YP_005748748.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus TCH60]
 gi|384869110|ref|YP_005751824.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus T0131]
 gi|385780790|ref|YP_005756961.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus 11819-97]
 gi|386728282|ref|YP_006194665.1| hemolysin [Staphylococcus aureus subsp. aureus 71193]
 gi|386830168|ref|YP_006236822.1| putative stress response-related Clp ATPase [Staphylococcus aureus
           subsp. aureus HO 5096 0412]
 gi|387142214|ref|YP_005730607.1| putative stress response-related Clp ATPase [Staphylococcus aureus
           subsp. aureus TW20]
 gi|387149685|ref|YP_005741249.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
           regulator of genetic competence clcC/mecB
           [Staphylococcus aureus 04-02981]
 gi|387601879|ref|YP_005733400.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
           aureus subsp. aureus ST398]
 gi|387779664|ref|YP_005754462.1| putative stress response-related Clp ATPase [Staphylococcus aureus
           subsp. aureus LGA251]
 gi|404477910|ref|YP_006709340.1| stress response-related Clp ATPase [Staphylococcus aureus
           08BA02176]
 gi|415684080|ref|ZP_11449235.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|415688911|ref|ZP_11452426.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|415693998|ref|ZP_11455603.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|417648357|ref|ZP_12298183.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21189]
 gi|417650784|ref|ZP_12300549.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21172]
 gi|417654130|ref|ZP_12303857.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21193]
 gi|417796780|ref|ZP_12443984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21305]
 gi|417798480|ref|ZP_12445646.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21310]
 gi|417801347|ref|ZP_12448440.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21318]
 gi|417889316|ref|ZP_12533407.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21195]
 gi|417893562|ref|ZP_12537588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21201]
 gi|417895979|ref|ZP_12539955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21235]
 gi|417899762|ref|ZP_12543663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21259]
 gi|417902183|ref|ZP_12546052.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21266]
 gi|418279368|ref|ZP_12892731.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21178]
 gi|418310656|ref|ZP_12922192.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21331]
 gi|418312992|ref|ZP_12924490.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21334]
 gi|418315148|ref|ZP_12926612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21340]
 gi|418318082|ref|ZP_12929496.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21232]
 gi|418320331|ref|ZP_12931692.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus VCU006]
 gi|418423697|ref|ZP_12996844.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS1]
 gi|418426641|ref|ZP_12999667.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS2]
 gi|418429567|ref|ZP_13002498.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS3a]
 gi|418432462|ref|ZP_13005262.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS4]
 gi|418436176|ref|ZP_13007993.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS5]
 gi|418439075|ref|ZP_13010796.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS6]
 gi|418442055|ref|ZP_13013672.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS7]
 gi|418445183|ref|ZP_13016674.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS8]
 gi|418448123|ref|ZP_13019528.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS9]
 gi|418450947|ref|ZP_13022289.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS10]
 gi|418453964|ref|ZP_13025237.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS11a]
 gi|418456868|ref|ZP_13028083.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS11b]
 gi|418561558|ref|ZP_13126046.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21262]
 gi|418566028|ref|ZP_13130417.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21264]
 gi|418566752|ref|ZP_13131120.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21272]
 gi|418570503|ref|ZP_13134771.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21283]
 gi|418573446|ref|ZP_13137640.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21333]
 gi|418581200|ref|ZP_13145283.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1605]
 gi|418595404|ref|ZP_13159018.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21342]
 gi|418599346|ref|ZP_13162835.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21343]
 gi|418601623|ref|ZP_13165043.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21345]
 gi|418639547|ref|ZP_13201792.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-3]
 gi|418642050|ref|ZP_13204251.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-24]
 gi|418643846|ref|ZP_13206001.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-55]
 gi|418646212|ref|ZP_13208323.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-88]
 gi|418651241|ref|ZP_13213249.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-91]
 gi|418654853|ref|ZP_13216746.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-99]
 gi|418656945|ref|ZP_13218729.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-105]
 gi|418658745|ref|ZP_13220454.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-111]
 gi|418662543|ref|ZP_13224087.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-122]
 gi|418874542|ref|ZP_13428808.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC93]
 gi|418877374|ref|ZP_13431613.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1165]
 gi|418880231|ref|ZP_13434451.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1213]
 gi|418883158|ref|ZP_13437358.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1769]
 gi|418885818|ref|ZP_13439968.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1150]
 gi|418891128|ref|ZP_13445245.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1176]
 gi|418893984|ref|ZP_13448085.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1057]
 gi|418896910|ref|ZP_13450983.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC341D]
 gi|418899874|ref|ZP_13453933.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1214]
 gi|418905107|ref|ZP_13459136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC345D]
 gi|418908279|ref|ZP_13462287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG149]
 gi|418913715|ref|ZP_13467688.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC340D]
 gi|418916334|ref|ZP_13470297.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1267]
 gi|418919339|ref|ZP_13473285.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC348]
 gi|418922157|ref|ZP_13476074.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1233]
 gi|418930554|ref|ZP_13484402.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1750]
 gi|418933455|ref|ZP_13487279.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC128]
 gi|418980365|ref|ZP_13528148.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
           aureus subsp. aureus DR10]
 gi|418981392|ref|ZP_13529107.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1242]
 gi|418985025|ref|ZP_13532715.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1500]
 gi|418990419|ref|ZP_13538080.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1096]
 gi|419774829|ref|ZP_14300783.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus CO-23]
 gi|419785934|ref|ZP_14311678.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-M]
 gi|421149287|ref|ZP_15608945.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
           305]
 gi|422744661|ref|ZP_16798616.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus MRSA177]
 gi|422745104|ref|ZP_16799050.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus MRSA131]
 gi|424775944|ref|ZP_18202931.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
 gi|424784378|ref|ZP_18211188.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
 gi|440707559|ref|ZP_20888254.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21282]
 gi|440733999|ref|ZP_20913612.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
 gi|443637217|ref|ZP_21121302.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21236]
 gi|443638292|ref|ZP_21122339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21196]
 gi|448741467|ref|ZP_21723431.1| endopeptidase [Staphylococcus aureus KT/314250]
 gi|81649908|sp|Q6GBW3.1|CLPC_STAAS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|81651703|sp|Q6GJE4.1|CLPC_STAAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|81706177|sp|Q7A797.1|CLPC_STAAN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|81782085|sp|Q99W78.1|CLPC_STAAM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|122063320|sp|Q2FJB5.1|CLPC_STAA3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|122063321|sp|Q2G0P5.1|CLPC_STAA8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|122063323|sp|P0C281.1|CLPC_STAAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|13700415|dbj|BAB41713.1| endopeptidase [Staphylococcus aureus subsp. aureus N315]
 gi|14246293|dbj|BAB56687.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu50]
 gi|49240883|emb|CAG39550.1| putative stress response-related Clp ATPase [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|49243832|emb|CAG42257.1| putative stress response-related Clp ATPase [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|87126998|gb|ABD21512.1| endopeptidase [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|87201844|gb|ABD29654.1| endopeptidase, putative [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147740053|gb|ABQ48351.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149945483|gb|ABR51419.1| ATPase AAA-2 domain protein [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150373499|dbj|BAF66759.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156720988|dbj|BAF77405.1| endopeptidase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160367573|gb|ABX28544.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253725142|gb|EES93871.1| ClpB ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253729461|gb|EES98190.1| ClpB ATPase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789349|gb|EEV27689.1| endopeptidase [Staphylococcus aureus A9781]
 gi|257840287|gb|EEV64750.1| endopeptidase [Staphylococcus aureus A9763]
 gi|257843617|gb|EEV68023.1| endopeptidase [Staphylococcus aureus A9719]
 gi|257847684|gb|EEV71683.1| endopeptidase [Staphylococcus aureus A9299]
 gi|257850757|gb|EEV74702.1| endopeptidase [Staphylococcus aureus A8115]
 gi|257854949|gb|EEV77894.1| endopeptidase [Staphylococcus aureus A6300]
 gi|257858317|gb|EEV81204.1| endopeptidase [Staphylococcus aureus A6224]
 gi|257859616|gb|EEV82466.1| endopeptidase [Staphylococcus aureus A5948]
 gi|257864060|gb|EEV86814.1| endopeptidase [Staphylococcus aureus A5937]
 gi|262074437|gb|ACY10410.1| ClpA-related protein [Staphylococcus aureus subsp. aureus ED98]
 gi|269940097|emb|CBI48473.1| putative stress response-related Clp ATPase [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282317446|gb|EFB47818.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus C427]
 gi|282325557|gb|EFB55865.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328236|gb|EFB58514.1| ATP-dependent chaperone ClpB [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331727|gb|EFB61238.1| endopeptidase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282589468|gb|EFB94557.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus A10102]
 gi|282596067|gb|EFC01028.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus C160]
 gi|282762639|gb|EFC02776.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus A8117]
 gi|283469817|emb|CAQ49028.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
           aureus subsp. aureus ST398]
 gi|283790773|gb|EFC29588.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|285816224|gb|ADC36711.1| ATP-dependent Clp protease, ATP-binding subunit ClpC / Negative
           regulator of genetic competence clcC/mecB
           [Staphylococcus aureus 04-02981]
 gi|294822812|gb|EFG39247.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus A9754]
 gi|294968132|gb|EFG44158.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus A8819]
 gi|295128850|gb|EFG58480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|296886707|gb|EFH25612.1| ClpC ATPase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297176873|gb|EFH36131.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus A8796]
 gi|297576885|gb|EFH95600.1| Clpc ATPase [Staphylococcus aureus subsp. aureus MN8]
 gi|302332238|gb|ADL22431.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302750416|gb|ADL64593.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304339663|gb|EFM05610.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|312439057|gb|ADQ78128.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus TCH60]
 gi|312829020|emb|CBX33862.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315128816|gb|EFT84815.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315193888|gb|EFU24282.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315196665|gb|EFU27012.1| AAA family ATP-binding protein [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141611|gb|EFW33450.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus MRSA131]
 gi|320141761|gb|EFW33589.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus MRSA177]
 gi|329313245|gb|AEB87658.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus T0131]
 gi|329727906|gb|EGG64355.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21172]
 gi|329731020|gb|EGG67393.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21189]
 gi|329731944|gb|EGG68300.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21193]
 gi|334268166|gb|EGL86611.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21305]
 gi|334275810|gb|EGL94085.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21310]
 gi|334276873|gb|EGL95116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21318]
 gi|341841185|gb|EGS82648.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21235]
 gi|341843778|gb|EGS84999.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21266]
 gi|341844370|gb|EGS85587.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21259]
 gi|341851726|gb|EGS92637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21195]
 gi|341854333|gb|EGS95204.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21201]
 gi|344176766|emb|CCC87228.1| putative stress response-related Clp ATPase [Staphylococcus aureus
           subsp. aureus LGA251]
 gi|359829604|gb|AEV77582.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus aureus subsp. aureus M013]
 gi|364521779|gb|AEW64529.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus 11819-97]
 gi|365170702|gb|EHM61663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21178]
 gi|365227517|gb|EHM68711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus VCU006]
 gi|365236360|gb|EHM77256.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21331]
 gi|365236933|gb|EHM77809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21334]
 gi|365243778|gb|EHM84446.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21340]
 gi|365244323|gb|EHM84984.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21232]
 gi|371971902|gb|EHO89294.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21264]
 gi|371977415|gb|EHO94686.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21262]
 gi|371981811|gb|EHO98973.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21333]
 gi|371983497|gb|EHP00639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21272]
 gi|371984012|gb|EHP01140.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21283]
 gi|374362503|gb|AEZ36608.1| ClpA-related protein [Staphylococcus aureus subsp. aureus VC40]
 gi|374397453|gb|EHQ68663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21343]
 gi|374398042|gb|EHQ69240.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21345]
 gi|374401543|gb|EHQ72609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21342]
 gi|375014250|gb|EHS07942.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-99]
 gi|375017187|gb|EHS10809.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-3]
 gi|375017827|gb|EHS11430.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-24]
 gi|375026147|gb|EHS19533.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-91]
 gi|375027272|gb|EHS20637.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-55]
 gi|375031945|gb|EHS25205.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-105]
 gi|375033412|gb|EHS26605.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-88]
 gi|375036042|gb|EHS29129.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-122]
 gi|375037645|gb|EHS30664.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-111]
 gi|377696082|gb|EHT20438.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1165]
 gi|377698332|gb|EHT22680.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1057]
 gi|377704956|gb|EHT29264.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1214]
 gi|377707212|gb|EHT31505.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1242]
 gi|377708157|gb|EHT32448.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1500]
 gi|377711984|gb|EHT36207.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1605]
 gi|377716271|gb|EHT40454.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1769]
 gi|377716421|gb|EHT40603.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1750]
 gi|377722541|gb|EHT46666.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1096]
 gi|377727116|gb|EHT51223.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1150]
 gi|377732085|gb|EHT56136.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1176]
 gi|377732669|gb|EHT56719.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1213]
 gi|377735480|gb|EHT59510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1233]
 gi|377751686|gb|EHT75614.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1267]
 gi|377755618|gb|EHT79516.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG149]
 gi|377758321|gb|EHT82206.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC340D]
 gi|377761689|gb|EHT85558.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC341D]
 gi|377766647|gb|EHT90480.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC345D]
 gi|377767304|gb|EHT91102.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC348]
 gi|377771235|gb|EHT94989.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC128]
 gi|377771882|gb|EHT95635.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIGC93]
 gi|379991893|gb|EIA13355.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
           aureus subsp. aureus DR10]
 gi|383361743|gb|EID39109.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-M]
 gi|383971330|gb|EID87408.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus CO-23]
 gi|384229575|gb|AFH68822.1| Negative regulator of genetic competence clpC/mecB [Staphylococcus
           aureus subsp. aureus 71193]
 gi|385195560|emb|CCG15169.1| putative stress response-related Clp ATPase [Staphylococcus aureus
           subsp. aureus HO 5096 0412]
 gi|387720914|gb|EIK08805.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS3a]
 gi|387721079|gb|EIK08966.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS2]
 gi|387722489|gb|EIK10287.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS1]
 gi|387727528|gb|EIK15041.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS4]
 gi|387729536|gb|EIK16971.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS5]
 gi|387731576|gb|EIK18858.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS6]
 gi|387738379|gb|EIK25422.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS8]
 gi|387739630|gb|EIK26626.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS9]
 gi|387739792|gb|EIK26775.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS7]
 gi|387746895|gb|EIK33615.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS10]
 gi|387748305|gb|EIK34994.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS11a]
 gi|387749110|gb|EIK35754.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus VRS11b]
 gi|394330204|gb|EJE56296.1| endopeptidase [Staphylococcus aureus subsp. aureus str. Newbould
           305]
 gi|402346723|gb|EJU81800.1| hemolysin B [Staphylococcus aureus subsp. aureus CM05]
 gi|404439399|gb|AFR72592.1| putative stress response-related Clp ATPase [Staphylococcus aureus
           08BA02176]
 gi|408422956|emb|CCJ10367.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408424944|emb|CCJ12331.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408426933|emb|CCJ14296.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408428921|emb|CCJ26086.1| Clp protease ATP binding subunit [Staphylococcus aureus subsp.
           aureus ST228]
 gi|408430909|emb|CCJ18224.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus ST228]
 gi|408432903|emb|CCJ20188.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus ST228]
 gi|408434892|emb|CCJ22152.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus ST228]
 gi|408436877|emb|CCJ24120.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus ST228]
 gi|421956977|gb|EKU09301.1| ATP-dependent Clp protease [Staphylococcus aureus CN79]
 gi|436431894|gb|ELP29246.1| endopeptidase [Staphylococcus aureus subsp. aureus DSM 20231]
 gi|436505881|gb|ELP41740.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21282]
 gi|443406095|gb|ELS64680.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21236]
 gi|443409729|gb|ELS68221.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21196]
 gi|445547768|gb|ELY16030.1| endopeptidase [Staphylococcus aureus KT/314250]
          Length = 818

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|410726273|ref|ZP_11364512.1| ATP-dependent chaperone ClpB [Clostridium sp. Maddingley MBC34-26]
 gi|410600867|gb|EKQ55390.1| ATP-dependent chaperone ClpB [Clostridium sp. Maddingley MBC34-26]
          Length = 899

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/324 (41%), Positives = 196/324 (60%), Gaps = 36/324 (11%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE+ +  R++GQ  AI  ++ AI R   G  D + P+  F+FLG +G+GKT
Sbjct: 593 EGEREKLLRLEEDMGTRVIGQGEAIEAVTNAILRARAGLKDINRPIGSFIFLGPTGVGKT 652

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 653 ELAKTLARNLF-DSEENIIRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRSPY 711

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAH DV  + LQ+ D+GRLTD KGKT++ K+ I +MTSN+ S    ++ L+
Sbjct: 712 SVILFDEIEKAHEDVFNIFLQILDDGRLTDNKGKTVDFKNTIIIMTSNIGS----EYLLE 767

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            + EG                    TI  H K  V+   LK  F + EFL R+++ + F 
Sbjct: 768 NKNEG--------------------TIEDHIKIRVMGA-LKSRF-KPEFLNRVDDTIMFK 805

Query: 492 PFSKSELHTLV---CRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHE 547
           P S+S +  ++    RE+N   K   DK NI I    + +TI+A +GYDV YGAR +K  
Sbjct: 806 PLSESGIKKIIDIFLREVNLRLK---DK-NIEIEVTDEAKTIMAKEGYDVVYGARPLKRY 861

Query: 548 VERQVVSQLAAAHEKSVIGKGSFV 571
           ++  + ++LA    K  +G GS V
Sbjct: 862 IQNTLENRLARMIIKGELGYGSKV 885


>gi|384179203|ref|YP_005564965.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis serovar finitimus YBT-020]
 gi|324325287|gb|ADY20547.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 866

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S  +      
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHL------ 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L   GE+ S +  S     G                   L+ HF R EFL R++EI+ F 
Sbjct: 732 LDGLGEDGSIKEESRELVMGQ------------------LRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|384546805|ref|YP_005736058.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus aureus subsp. aureus ED133]
 gi|416840758|ref|ZP_11903945.1| endopeptidase [Staphylococcus aureus O11]
 gi|416846026|ref|ZP_11906369.1| endopeptidase [Staphylococcus aureus O46]
 gi|298693856|gb|ADI97078.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus aureus subsp. aureus ED133]
 gi|323439794|gb|EGA97511.1| endopeptidase [Staphylococcus aureus O11]
 gi|323443104|gb|EGB00724.1| endopeptidase [Staphylococcus aureus O46]
          Length = 818

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|257424638|ref|ZP_05601065.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257427306|ref|ZP_05603705.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257429942|ref|ZP_05606326.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257435548|ref|ZP_05611596.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
           subsp. aureus M876]
 gi|282913357|ref|ZP_06321146.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus M899]
 gi|282923274|ref|ZP_06330954.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus C101]
 gi|293500403|ref|ZP_06666254.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293509348|ref|ZP_06668059.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus M809]
 gi|293523935|ref|ZP_06670622.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus M1015]
 gi|257272208|gb|EEV04331.1| endopeptidase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275499|gb|EEV06972.1| endopeptidase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257279139|gb|EEV09740.1| endopeptidase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257284739|gb|EEV14858.1| ATPase AAA-2 domain-containing protein [Staphylococcus aureus
           subsp. aureus M876]
 gi|282314142|gb|EFB44532.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus C101]
 gi|282322389|gb|EFB52711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus M899]
 gi|290920898|gb|EFD97959.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus M1015]
 gi|291095408|gb|EFE25669.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291467445|gb|EFF09960.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus M809]
          Length = 818

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|312143562|ref|YP_003995008.1| ATP-dependent chaperone ClpB [Halanaerobium hydrogeniformans]
 gi|311904213|gb|ADQ14654.1| ATP-dependent chaperone ClpB [Halanaerobium hydrogeniformans]
          Length = 860

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/356 (37%), Positives = 209/356 (58%), Gaps = 36/356 (10%)

Query: 218 KDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAI 277
           K+N+  +  +   + +I +I+  + +    LQ+  E E+ +   LE+ L+ R+VGQ  A+
Sbjct: 526 KENTEQLVKEEVTEEDIAEIVSLWTD--IPLQKLMEEEKEKLIHLEEELEKRVVGQRDAV 583

Query: 278 NIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSE 336
             +S AI+R   G  D D PL  FLF+G +G+GKTELAK LA Y+  D+K A IRLDMSE
Sbjct: 584 VAVSNAIRRSRTGLQDADRPLASFLFMGPTGVGKTELAKTLAAYLFDDEK-ALIRLDMSE 642

Query: 337 YQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDE 396
           Y E+H V+KLIG+PPGY+G ++GGQLT+++++ P +V+LFDE++KAH DV  +LLQ+ D+
Sbjct: 643 YMERHAVSKLIGSPPGYVGFEEGGQLTEKVRRKPYSVILFDEIEKAHQDVFNILLQILDD 702

Query: 397 GRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDV 456
           G LTD +GK ++ K+ + +MTSN+ S    Q  + L+++ E   K               
Sbjct: 703 GVLTDSQGKEVDFKNTVIIMTSNIGS----QFIMDLQEKSEIREK--------------- 743

Query: 457 TISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDK 516
                     ++  LK HF R EFL RI+E + F   SK  L  ++  ++++  +   DK
Sbjct: 744 ----------IEQSLKSHF-RPEFLNRIDEKIIFNSLSKENLFDIIDIQISYLQQNLADK 792

Query: 517 HNINIVWDIDV-ETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
            +I I    +  E +L  GYD  YGAR ++  ++ Q+  +LA A  +  I +G  +
Sbjct: 793 -DIEIELTKNAKEELLEIGYDPAYGARPLRRVIQSQIKDELAMALLEGKIEEGDII 847


>gi|89898185|ref|YP_515295.1| ATP-dependent Clp endopeptidase ATP-binding chain B [Chlamydophila
           felis Fe/C-56]
 gi|89331557|dbj|BAE81150.1| ATP-dependent Clp endopeptidase ATP-binding chain B [Chlamydophila
           felis Fe/C-56]
          Length = 864

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 195/307 (63%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMVRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +     K+G E SK T    
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYC---AKKGREVSKET---- 740

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                     +S      VV P LK++F   EF+ RI++I+ F+P +  ++  +V  ++ 
Sbjct: 741 ---------VLS------VVSPELKKYF-SPEFINRIDDILPFVPLNTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L++  + + WD  V   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVAQRLLERR-VTLTWDDSVILYLSEHGYDSSFGARPLKRLIQQKVVTLLSKALLKGDIK 843

Query: 567 KGSFVRL 573
             + + L
Sbjct: 844 SDTSIEL 850


>gi|302345323|ref|YP_003813676.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
           ATCC 25845]
 gi|302149089|gb|ADK95351.1| ATP-dependent chaperone protein ClpB [Prevotella melaninogenica
           ATCC 25845]
          Length = 862

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/298 (41%), Positives = 180/298 (60%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G GKTELAK LA Y
Sbjct: 560 LEDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V +LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDES-MMTRIDMSEYQEKFSVTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+G LTD KG+T+  K+ I +MTSNL S  I Q    L       +
Sbjct: 679 KAHPDVFNILLQVLDDGHLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQFEYLND-----T 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I K++ + +D              +LK+   R EFL RI+E + FLP +K ++  
Sbjct: 734 NREEVIDKAKVAVMD--------------MLKKTI-RPEFLNRIDETIMFLPLTKEQIGD 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K  L+   I + W       L+D GYD  +GAR +K  ++R V++ L+
Sbjct: 779 VVRLQLE-RVKDMLEPQGIELQWTDPAINYLSDVGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|229154838|ref|ZP_04282953.1| Chaperone protein clpB 1 [Bacillus cereus ATCC 4342]
 gi|228628786|gb|EEK85498.1| Chaperone protein clpB 1 [Bacillus cereus ATCC 4342]
          Length = 866

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|418286169|ref|ZP_12898820.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21209]
 gi|418924752|ref|ZP_13478655.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG2018]
 gi|365167723|gb|EHM59100.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21209]
 gi|377746047|gb|EHT70018.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG2018]
          Length = 818

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIQKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|409990893|ref|ZP_11274211.1| ATPase [Arthrospira platensis str. Paraca]
 gi|291570318|dbj|BAI92590.1| ClpB protein [Arthrospira platensis NIES-39]
 gi|409938252|gb|EKN79598.1| ATPase [Arthrospira platensis str. Paraca]
          Length = 872

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 191/307 (62%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   LE  L  R+VGQ+ A+  ++ +I+R   G +D + P+  F+FLG +G+GKT
Sbjct: 559 ESEKEKLLHLEDELHQRVVGQDEAVTAVADSIQRSRAGLSDPNRPVASFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +EA +R+DMSEY EKH V++L+GAPPGY+G+DDGGQLT+ +++ P 
Sbjct: 619 ELAKALASYLF-DTEEAIVRIDMSEYMEKHSVSRLLGAPPGYVGYDDGGQLTEAIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  V+LQ+ D+GR+TD +G+T++ K+ I +MTSN+ S    Q+ L 
Sbjct: 678 AVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGRTVDFKNTIIIMTSNIGS----QYILD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  +   + +                       H V   ++  F R EFL RI+EI+ F 
Sbjct: 734 IAGDDSRYEEMR---------------------HRVMDSMRSAF-RPEFLNRIDEIIIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
                +L  +V  +L   +++ L++H +++         LAD G+D  YGAR +K  +++
Sbjct: 772 SLKPHQLREIVLLQLGNLSQR-LEQHKMSLKLSESALDYLADVGFDPVYGARPLKRAIQQ 830

Query: 551 QVVSQLA 557
           ++ +Q+A
Sbjct: 831 ELETQIA 837


>gi|229095757|ref|ZP_04226736.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-29]
 gi|423443959|ref|ZP_17420865.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
 gi|423445785|ref|ZP_17422664.1| chaperone ClpB [Bacillus cereus BAG5O-1]
 gi|423467051|ref|ZP_17443819.1| chaperone ClpB [Bacillus cereus BAG6O-1]
 gi|423536448|ref|ZP_17512866.1| chaperone ClpB [Bacillus cereus HuB2-9]
 gi|423538307|ref|ZP_17514698.1| chaperone ClpB [Bacillus cereus HuB4-10]
 gi|423544531|ref|ZP_17520889.1| chaperone ClpB [Bacillus cereus HuB5-5]
 gi|423625749|ref|ZP_17601527.1| chaperone ClpB [Bacillus cereus VD148]
 gi|228687590|gb|EEL41489.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-29]
 gi|401132878|gb|EJQ40511.1| chaperone ClpB [Bacillus cereus BAG5O-1]
 gi|401177950|gb|EJQ85136.1| chaperone ClpB [Bacillus cereus HuB4-10]
 gi|401184061|gb|EJQ91170.1| chaperone ClpB [Bacillus cereus HuB5-5]
 gi|401253493|gb|EJR59730.1| chaperone ClpB [Bacillus cereus VD148]
 gi|402412091|gb|EJV44453.1| chaperone ClpB [Bacillus cereus BAG4X2-1]
 gi|402414855|gb|EJV47182.1| chaperone ClpB [Bacillus cereus BAG6O-1]
 gi|402460884|gb|EJV92599.1| chaperone ClpB [Bacillus cereus HuB2-9]
          Length = 866

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEADGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|82750232|ref|YP_415973.1| endopeptidase [Staphylococcus aureus RF122]
 gi|282915846|ref|ZP_06323611.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus D139]
 gi|122063322|sp|Q2YSD6.1|CLPC_STAAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|82655763|emb|CAI80163.1| endopeptidase [Staphylococcus aureus RF122]
 gi|282320142|gb|EFB50487.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus D139]
          Length = 818

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|418578415|ref|ZP_13142510.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1114]
 gi|418902788|ref|ZP_13456829.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1770]
 gi|377696442|gb|EHT20797.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1114]
 gi|377741803|gb|EHT65788.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1770]
          Length = 818

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|257432644|ref|ZP_05609004.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
 gi|257282059|gb|EEV12194.1| endopeptidase [Staphylococcus aureus subsp. aureus E1410]
          Length = 818

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|418282574|ref|ZP_12895339.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21202]
 gi|365169575|gb|EHM60821.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21202]
          Length = 818

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDALHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|262049567|ref|ZP_06022436.1| endopeptidase [Staphylococcus aureus D30]
 gi|259162307|gb|EEW46880.1| endopeptidase [Staphylococcus aureus D30]
          Length = 818

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|229177685|ref|ZP_04305062.1| Chaperone protein clpB 1 [Bacillus cereus 172560W]
 gi|228605875|gb|EEK63319.1| Chaperone protein clpB 1 [Bacillus cereus 172560W]
          Length = 866

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|392378192|ref|YP_004985351.1| ATP-dependent chaperone [Azospirillum brasilense Sp245]
 gi|356879673|emb|CCD00599.1| ATP-dependent chaperone [Azospirillum brasilense Sp245]
          Length = 876

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 196/323 (60%), Gaps = 32/323 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A ER K   +E RLK R++GQ+ AI  +S A++R   G  D + P+  FLFLG +G+GKT
Sbjct: 553 AGEREKLLAMETRLKTRVIGQDEAIVAVSNAVRRARAGLQDPNRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D + A +RLDMSEY EKH VA++IGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELTKALAEFLF-DDETAMVRLDMSEYMEKHSVARMIGAPPGYVGYEEGGALTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +A     
Sbjct: 672 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVVIIMTSNLGSEVLAAQ--- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              EG++                    S   +D V++ +++ HF R EFL R++EI+ F 
Sbjct: 729 --PEGQD--------------------SGAVRDEVME-VVRAHF-RPEFLNRLDEILLFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              +S +  +V  +L    +   D+ +I +  D      LA+ GYD  YGAR +K  ++R
Sbjct: 765 RLDRSHMGGIVTIQLGRLIRMLADR-DITLEVDEAATQWLAEAGYDPVYGARPLKRVIQR 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
           ++ + LA    +  +  G  V++
Sbjct: 824 ELQNPLATMILEGRVADGQTVKV 846


>gi|224538942|ref|ZP_03679481.1| hypothetical protein BACCELL_03839 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519460|gb|EEF88565.1| hypothetical protein BACCELL_03839 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 862

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/298 (39%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRMVNFKNTIIIMTSNMGSAYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  G+N +  I    K+  V  +LK+   R EFL RI+E + FLP ++SE+  
Sbjct: 727 -----MEKLNGTNKEQVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLNESEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ +  I+ D  +E +   GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-GVQKMLAQNGVELILTDGAIEFLTKVGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|448744005|ref|ZP_21725910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus KT/Y21]
 gi|445562744|gb|ELY18910.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus KT/Y21]
          Length = 818

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|423366983|ref|ZP_17344416.1| chaperone ClpB [Bacillus cereus VD142]
 gi|401086766|gb|EJP94987.1| chaperone ClpB [Bacillus cereus VD142]
          Length = 866

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 125/325 (38%), Positives = 198/325 (60%), Gaps = 27/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           V ++LA      VI   S V + V+
Sbjct: 833 VETKLARELIAGVITDNSHVVVDVE 857


>gi|47568371|ref|ZP_00239072.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus G9241]
 gi|47554919|gb|EAL13269.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus G9241]
          Length = 866

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|418950315|ref|ZP_13502500.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-160]
 gi|375377281|gb|EHS80761.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-160]
          Length = 818

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|209525054|ref|ZP_03273598.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
 gi|209494463|gb|EDZ94774.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
          Length = 872

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 191/307 (62%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   LE  L  R+VGQ+ A+  ++ +I+R   G +D + P+  F+FLG +G+GKT
Sbjct: 559 ESEKEKLLHLEDELHQRVVGQDEAVTAVADSIQRSRAGLSDPNRPVASFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +EA +R+DMSEY EKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ELAKALASYLF-DTEEAIVRVDMSEYMEKHSVSRLLGAPPGYVGYDEGGQLTEAIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  V+LQ+ D+GR+TD +G+T++ K+ I +MTSN+ S    Q+ L 
Sbjct: 678 AVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGRTVDFKNTIIIMTSNIGS----QYILD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  +   + +                       H V   ++  F R EFL RI+EI+ F 
Sbjct: 734 IAGDDSRYEEMR---------------------HRVMDSMRSAF-RPEFLNRIDEIIIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
                +L  +V  +L   +++ L++H +++         LAD G+D  YGAR +K  ++R
Sbjct: 772 SLKPHQLREIVLLQLGNLSQR-LEQHKMSLKLSESALDYLADVGFDPVYGARPLKRAIQR 830

Query: 551 QVVSQLA 557
           ++ +Q+A
Sbjct: 831 ELETQIA 837


>gi|418299953|ref|ZP_12911783.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
           tumefaciens CCNWGS0286]
 gi|355534516|gb|EHH03824.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
           tumefaciens CCNWGS0286]
          Length = 874

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 153/431 (35%), Positives = 226/431 (52%), Gaps = 53/431 (12%)

Query: 154 TVHRTAAEKKMNPFEVLLKREDEFND---VLNPNMTFLGFSALHYGVVAGNTEVVELLLK 210
           T    A ++K+     L KR DE  +   +   N  F     L YG++ G       L K
Sbjct: 460 TARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPG-------LEK 512

Query: 211 SGADPTVKDNSG--HIPSDYAEDANIKQILQKYA----EKYADLQREKEAEERRKYPLEQ 264
             A    +D+SG   +  +     NI  ++ ++     +K  + QREK         +E 
Sbjct: 513 ELAAAEARDSSGVGSMVQEVVTADNIAHVVSRWTGIPVDKMLEGQREK------LLRMED 566

Query: 265 RLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHR 323
            L   +VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  
Sbjct: 567 ELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLF- 625

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D + A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P  VVLFDE++KAH
Sbjct: 626 DDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAH 685

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDV  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSNL S  + Q                
Sbjct: 686 PDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQ---------------- 729

Query: 444 PSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVC 503
                  G N DV   R      V   ++ HF R EFL RI++I+ F    + E+  +V 
Sbjct: 730 ------MGDNDDVDSVRDL----VMERVRSHF-RPEFLNRIDDIILFHRLRRDEMGAIVE 778

Query: 504 RELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            +L       L    I++  D D  + LA+ GYD  YGAR +K  +++ V  +LA     
Sbjct: 779 IQLKRLI-SLLGDRKISLELDEDARSWLANKGYDPAYGARPLKRVIQKAVQDRLAEMILG 837

Query: 563 SVIGKGSFVRL 573
             +  GS V++
Sbjct: 838 GEVPDGSRVKV 848


>gi|26990034|ref|NP_745459.1| chaperone-associated ATPase [Pseudomonas putida KT2440]
 gi|24984957|gb|AAN68923.1|AE016523_12 chaperone-associated ATPase, putative [Pseudomonas putida KT2440]
          Length = 940

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 131/326 (40%), Positives = 196/326 (60%), Gaps = 29/326 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLGS+G+GKTE
Sbjct: 616 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGSTGVGKTE 675

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 676 LAKALAETIYGDES-ALLRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 734

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I +     
Sbjct: 735 VLLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKAP 794

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
              GEE+ K     +K +                V  +L+ HF R EFL RI+EI+ F  
Sbjct: 795 GAAGEEYEK-----TKVE----------------VMEVLRGHF-RPEFLNRIDEIIVFHA 832

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQ 551
             K E+  +V  +L   A+ A  +  + + +D  +   LA  GY   +GAR +K  +  +
Sbjct: 833 LGKQEIRHIVGLQLERVARNAASQ-GVTLTFDETLVDHLAQVGYKPEFGARELKRLIRSE 891

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQW 577
           + + LA       IGKG     +V+W
Sbjct: 892 LETALAREMLGGGIGKGDHA--HVRW 915


>gi|282924437|ref|ZP_06332109.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus A9765]
 gi|418911193|ref|ZP_13465176.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG547]
 gi|418927840|ref|ZP_13481726.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1612]
 gi|282592848|gb|EFB97852.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus A9765]
 gi|377724571|gb|EHT48686.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG547]
 gi|377737752|gb|EHT61761.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1612]
          Length = 818

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|428301253|ref|YP_007139559.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
 gi|428237797|gb|AFZ03587.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 6303]
          Length = 872

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/328 (38%), Positives = 193/328 (58%), Gaps = 30/328 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +++ K+      + +  E+E+ +   LE  L  R++GQ  A+  ++ AI+R   G
Sbjct: 539 EADIAEVISKWT--GIPISKLVESEKEKLLHLEDELHQRVIGQNEAVTAVADAIQRSRAG 596

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  F+FLG +G+GKTELAK LA Y+  D  EA +R+DMSEY EKH V++LIGA
Sbjct: 597 LADPNRPIASFIFLGPTGVGKTELAKALAAYLF-DTDEAMVRIDMSEYMEKHAVSRLIGA 655

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+D+GGQLT+ +++ P  VVLFDE++KAHPDV  + LQ+ D+GR+TD +G+TI+ 
Sbjct: 656 PPGYVGYDEGGQLTEAIRRRPYTVVLFDEIEKAHPDVFNIFLQILDDGRVTDAQGRTIDF 715

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ I +MTSN+ S  I   A                      SN D      F+   V  
Sbjct: 716 KNTIIIMTSNIGSQYILDVA-------------------GDDSNYD---DMRFR---VTE 750

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
            ++  F R EFL R++E + F    KSEL  +V  ++N    +  D+     V D  ++ 
Sbjct: 751 AMRNAF-RPEFLNRVDEQIIFHTLQKSELRNIVQLQINRLRNRLSDRKMSLKVSDTALDF 809

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLA 557
           +   GYD  YGAR +K  ++R++ +Q+A
Sbjct: 810 LAEVGYDPVYGARPLKRAIQRELETQIA 837


>gi|228984343|ref|ZP_04144524.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775460|gb|EEM23845.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 866

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|229114707|ref|ZP_04244121.1| Chaperone protein clpB 1 [Bacillus cereus Rock1-3]
 gi|423380928|ref|ZP_17358212.1| chaperone ClpB [Bacillus cereus BAG1O-2]
 gi|228668772|gb|EEL24200.1| Chaperone protein clpB 1 [Bacillus cereus Rock1-3]
 gi|401630550|gb|EJS48351.1| chaperone ClpB [Bacillus cereus BAG1O-2]
          Length = 866

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEADGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|258422629|ref|ZP_05685535.1| endopeptidase [Staphylococcus aureus A9635]
 gi|417890327|ref|ZP_12534404.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21200]
 gi|418308157|ref|ZP_12919810.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21194]
 gi|418559680|ref|ZP_13124215.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21252]
 gi|418888425|ref|ZP_13442562.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1524]
 gi|418993239|ref|ZP_13540878.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG290]
 gi|257847201|gb|EEV71209.1| endopeptidase [Staphylococcus aureus A9635]
 gi|341855054|gb|EGS95908.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21200]
 gi|365241637|gb|EHM82381.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21194]
 gi|371974523|gb|EHO91853.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus 21252]
 gi|377747202|gb|EHT71168.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG290]
 gi|377754877|gb|EHT78782.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1524]
          Length = 818

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDALHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|407703626|ref|YP_006827211.1| Zn-dependent protease [Bacillus thuringiensis MC28]
 gi|407381311|gb|AFU11812.1| Chaperone protein clpB 1 [Bacillus thuringiensis MC28]
          Length = 866

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEADGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|322421265|ref|YP_004200488.1| ATP-dependent chaperone ClpB [Geobacter sp. M18]
 gi|320127652|gb|ADW15212.1| ATP-dependent chaperone ClpB [Geobacter sp. M18]
          Length = 871

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/325 (37%), Positives = 196/325 (60%), Gaps = 32/325 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+RLK R+VGQ+ A+ +++ A++R  +G +D + P+  F+FLG +G+GKT
Sbjct: 557 ETESEKLVRMEERLKSRVVGQDEALTLVANAVRRARSGLSDPNRPIGSFIFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E A+ LA ++  D  +A +R DMSEYQEKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 617 ETARALASFLF-DDDQAIVRFDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            +VLFDE++KAHP+V  V LQ+ D+GRLTDG+G+T++ K+A+ +MTSNL S  I Q+   
Sbjct: 676 CIVLFDEIEKAHPEVFNVFLQILDDGRLTDGQGRTVDFKNAVIIMTSNLGSQWIQQYG-- 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                 ++++    + +        T+   FK               EFL R++EIV + 
Sbjct: 734 ----ATDYARMQSEVME--------TLREAFK--------------PEFLNRVDEIVIYH 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
                 +  +V  +L    ++ L++ +I + V D   E +  +GYD  YGAR +K  ++R
Sbjct: 768 ALPLERIKEIVSIQLQSLTRR-LEEKSIGLQVTDQAQEFLAREGYDPAYGARPLKRALQR 826

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
           ++   LA    +   G G  V++ V
Sbjct: 827 KIQDPLALMLLEGKFGPGDAVQVDV 851


>gi|282880308|ref|ZP_06289022.1| ATP-dependent chaperone protein ClpB [Prevotella timonensis CRIS
           5C-B1]
 gi|281305810|gb|EFA97856.1| ATP-dependent chaperone protein ClpB [Prevotella timonensis CRIS
           5C-B1]
          Length = 863

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/298 (40%), Positives = 178/298 (59%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA Y
Sbjct: 560 LENELHRRVIGQDEAIVAVSDAVRRSRAGLQDPKRPIASFIFLGTTGVGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LFNDES-MMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q    +        
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQMQDI-------- 730

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
             TP   + +  +  + +    K  +          R EFL RI+E + FLP +K E+  
Sbjct: 731 --TPLNREEKLEHTKLEVMNMLKKTI----------RPEFLNRIDETIMFLPLTKHEIAD 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++N   K  L     ++ W       L D GY+  +GAR +K  ++R V++ L+
Sbjct: 779 VVELQMN-AVKHMLQTQGFSLEWTQGAIDYLCDKGYNPEFGARPVKRAIQRYVLNDLS 835


>gi|222094897|ref|YP_002528957.1| ATP-dependent clp protease, ATP-binding subunit clpb [Bacillus
           cereus Q1]
 gi|221238955|gb|ACM11665.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus Q1]
          Length = 866

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S  +      
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAHL------ 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L   GE+ S +  S     G                   L+ HF R EFL R++EI+ F 
Sbjct: 732 LDGLGEDGSIKEESRELVMGQ------------------LRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEVGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|224026167|ref|ZP_03644533.1| hypothetical protein BACCOPRO_02923 [Bacteroides coprophilus DSM
           18228]
 gi|224019403|gb|EEF77401.1| hypothetical protein BACCOPRO_02923 [Bacteroides coprophilus DSM
           18228]
          Length = 862

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 191/307 (62%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEREKLLHLEDELHKRVIGQDEAIQAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEKH V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDESLMTRIDMSEYQEKHTVSRLIGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I     Q
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSAYIQS---Q 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             K  ++   +    +K++  N+                LK+   R EFL RI+E + F 
Sbjct: 727 FEKINDQNHDQIVEETKTEVMNM----------------LKKTI-RPEFLNRIDETIMFQ 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P ++ ++  +V  ++N   +K L+++ + + + D  V+ I   GYD  +GAR +K  ++R
Sbjct: 770 PLNRPQIEQIVRLQIN-GIQKMLNENGVTLRMTDEAVDFIATAGYDPEFGARPVKRAIQR 828

Query: 551 QVVSQLA 557
            +++ L+
Sbjct: 829 YLLNDLS 835


>gi|423134182|ref|ZP_17121829.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CIP 101113]
 gi|371646939|gb|EHO12449.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CIP 101113]
          Length = 862

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 188/307 (61%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  IS A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLHLEDELHKRVVGQEEAIEAISDAVRRSRAGLQDPKKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEY E+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYGERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F   T     S+ + ++V      K  V          R EFL RI+E+V F 
Sbjct: 725 -----EKFENATNIEQASEDAKVEVL--NELKQQV----------RPEFLNRIDEVVMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P SK+ +  +V  +L     K L + NI++    + +  LA  G+D  +GAR +K  V++
Sbjct: 768 PLSKNNILQIVDIQLQ-SVFKMLAQQNIHMEATAEAKEFLATKGFDPEFGARPVKRVVQK 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNRLS 833


>gi|325179668|emb|CCA14066.1| heat shock protein 101 putative [Albugo laibachii Nc14]
          Length = 888

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 130/342 (38%), Positives = 202/342 (59%), Gaps = 15/342 (4%)

Query: 219 DNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAIN 278
           +N   + S+   D  I QI+ ++      + R   +   R   LE+R+ +R+VGQE A+N
Sbjct: 523 ENHPKLVSEVVRDEQICQIVSRWT--GIPVSRLTSSTSDRLLHLEERIHNRVVGQEEAVN 580

Query: 279 IISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEY 337
            +  A+ R   G +  + P   FLFLG +G+GKTELAK LAF +  D  +  +R+DMSEY
Sbjct: 581 AVCEAVVRSRAGLSRREQPTGSFLFLGPTGVGKTELAKALAFELF-DNDKHMVRIDMSEY 639

Query: 338 QEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEG 397
            E+H VA+LIGAPPGY+GH++GGQLT+ +++ P  VVL DE++KAHP VL +LLQL D+G
Sbjct: 640 MEEHSVARLIGAPPGYVGHEEGGQLTESIRRKPYNVVLLDEIEKAHPKVLNILLQLLDDG 699

Query: 398 RLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISK--SQGSNLD 455
           RLTD  G+T++  + + +MTSN+     A+H + L     + S R    ++  S+G  + 
Sbjct: 700 RLTDSHGRTVDFTNVVVIMTSNIG----AEHLMAL--GSIDVSPRHSKKARIGSEGDEVT 753

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
               R  ++ V+Q +  R   R E L R+++IV F P  +++L  +V  +    AK+  +
Sbjct: 754 PAFVRQ-RELVLQQL--RATIRPELLNRLDDIVVFSPLGRAQLRKIVSLQFESVAKRLKE 810

Query: 516 KHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
            H    V    ++ IL + YD  YGAR +K  +E+ VV+ L+
Sbjct: 811 SHISMRVSVSALDVILEEAYDPQYGARPLKRYIEKHVVTGLS 852


>gi|338536305|ref|YP_004669639.1| ATP-dependent chaperone protein ClpB [Myxococcus fulvus HW-1]
 gi|337262401|gb|AEI68561.1| ATP-dependent chaperone protein ClpB [Myxococcus fulvus HW-1]
          Length = 874

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 124/311 (39%), Positives = 188/311 (60%), Gaps = 27/311 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  E E ++   +E RL  R++GQ SAI  +S A++R  +G  D + P+  F+FLG +
Sbjct: 550 VSRLMEGEVQKLVHMEDRLAKRVIGQRSAIEAVSNAVRRARSGLQDPNRPIGSFIFLGPT 609

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTE AK LA ++  D   A +R+DMSEY EKH VA+L+GAPPGY+G+++GGQLT+ +
Sbjct: 610 GVGKTETAKALAEFLF-DDDSAMVRIDMSEYMEKHSVARLVGAPPGYVGYEEGGQLTEAV 668

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P  VVLFDE++KAH DV  VLLQ+ DEGRLTD +G+T++ K+ + ++TSNL S +I 
Sbjct: 669 RRRPYTVVLFDEIEKAHHDVFNVLLQILDEGRLTDSQGRTVDFKNTVLILTSNLGSQDI- 727

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           Q  +  + E +E ++                       + V   L+ HF R EFL R++E
Sbjct: 728 QAGMAGKDELDERTR-----------------------NEVMDALRGHF-RPEFLNRVDE 763

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           +V F P  K +++ +V  +L   +K   DK     + D   E +   GYD  YGAR +K 
Sbjct: 764 VVIFEPLRKKDIYRIVDLQLARLSKLLADKRLTLELTDKARELLAERGYDPTYGARPLKR 823

Query: 547 EVERQVVSQLA 557
            V++ ++  LA
Sbjct: 824 AVQKNLLDPLA 834


>gi|229171916|ref|ZP_04299483.1| Chaperone protein clpB 1 [Bacillus cereus MM3]
 gi|228611550|gb|EEK68805.1| Chaperone protein clpB 1 [Bacillus cereus MM3]
          Length = 866

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L  R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSKRVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLKADGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAREFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|329961410|ref|ZP_08299533.1| ATP-dependent chaperone protein ClpB [Bacteroides fluxus YIT 12057]
 gi|328531887|gb|EGF58710.1| ATP-dependent chaperone protein ClpB [Bacteroides fluxus YIT 12057]
          Length = 864

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 119/298 (39%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  +S A++R   G  D   P+  FLFLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQDEAIAAVSDAVRRSRAGLQDPKRPIGSFLFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSAYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K   SN +  +    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLNSSNKEEIVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + +++V  D  ++ +   GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-SVQKMLSANGVDLVLADAAIDFLSNTGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|27363946|ref|NP_759474.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
 gi|54035847|sp|Q8DEV2.1|CLPB_VIBVU RecName: Full=Chaperone protein ClpB
 gi|27360063|gb|AAO09001.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
          Length = 857

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 116/307 (37%), Positives = 194/307 (63%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E+ L  R++GQ+ A+ +++ AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAM 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G                          K+ V++ ++ +HF R EFL R++E V F 
Sbjct: 732 LDYQG-------------------------IKEQVME-VVTKHF-RPEFLNRVDETVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P  +  + ++   +LN  A + +++H   + V D  +E I   G+D  YGAR +K  +++
Sbjct: 765 PLGQDHIKSIAAIQLNRLANR-MEEHGYPLEVSDKALELIAQVGFDPVYGARPLKRAIQQ 823

Query: 551 QVVSQLA 557
            + + LA
Sbjct: 824 SIENPLA 830


>gi|395800990|ref|ZP_10480261.1| ATPase [Flavobacterium sp. F52]
 gi|395436857|gb|EJG02780.1| ATPase [Flavobacterium sp. F52]
          Length = 865

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/300 (42%), Positives = 182/300 (60%), Gaps = 29/300 (9%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R+VGQE AI  +S A++R   G  D   P+  FLFLG++G+GKTELAK LA Y
Sbjct: 560 LEDELHKRVVGQEEAIEAVSDAVRRSRAGLQDMKKPVGSFLFLGTTGVGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++
Sbjct: 620 LF-DDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPD   +LLQ+ DEGRLTD KG+  + ++ I +MTSN+ SN I           E+F 
Sbjct: 679 KAHPDTFNILLQVLDEGRLTDNKGRLADFRNTIIIMTSNMGSNIIQ----------EKFE 728

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
               S+  +         +   K+ V+   L +   R EF+ RI+EIV F P +   +  
Sbjct: 729 NLKGSVEAA---------TEAAKNEVLG--LLKQTVRPEFINRIDEIVMFTPLTVENISR 777

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETI--LAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K    +    I  D   E I  LA+ GYD H+GAR +K  V+R+V++QL+
Sbjct: 778 IVSLQLKSVTKMLAMQ---GITMDATPEAIGYLAEKGYDPHFGARPVKRVVQREVLNQLS 834


>gi|393775997|ref|ZP_10364294.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
           PBA]
 gi|392716940|gb|EIZ04517.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Ralstonia sp.
           PBA]
          Length = 949

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 198/318 (62%), Gaps = 33/318 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLARAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K    R
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLAFDQTLIDHFAEEGYKPEFGARELK----R 869

Query: 551 QVVSQLAAAHEKSVIGKG 568
            + S+L  A  + ++G G
Sbjct: 870 LIRSELETALAREMLGGG 887


>gi|424908660|ref|ZP_18332037.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. viciae
           USDA 2370]
 gi|392844691|gb|EJA97213.1| ATP-dependent chaperone ClpB [Rhizobium leguminosarum bv. viciae
           USDA 2370]
          Length = 874

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 225/431 (52%), Gaps = 53/431 (12%)

Query: 154 TVHRTAAEKKMNPFEVLLKREDEFNDVL---NPNMTFLGFSALHYGVVAGNTEVVELLLK 210
           T    A ++K+     L KR DE  + L     N  F     L YG++ G       + K
Sbjct: 460 TARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPG-------IEK 512

Query: 211 SGADPTVKDNSG--HIPSDYAEDANIKQILQKYA----EKYADLQREKEAEERRKYPLEQ 264
             A    +D+SG   +  +     NI  ++ ++     +K  + QREK         +E 
Sbjct: 513 ELAAAEARDSSGAGSMVQEVVTADNIAHVVSRWTGIPVDKMLEGQREK------LLRMED 566

Query: 265 RLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHR 323
            L   +VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  
Sbjct: 567 ELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLF- 625

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D + A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P  VVLFDE++KAH
Sbjct: 626 DDESAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAH 685

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDV  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSNL S  + Q                
Sbjct: 686 PDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQ---------------- 729

Query: 444 PSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVC 503
                  G N DV   R      V   ++ HF R EFL RI++I+ F    + E+  +V 
Sbjct: 730 ------MGDNDDVDSVREL----VMERVRSHF-RPEFLNRIDDIILFHRLRRDEMGAIVE 778

Query: 504 RELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            +L       L    I++  D D    LA+ GYD  YGAR +K  +++ V  +LA     
Sbjct: 779 IQLKRLV-SLLGDRKISLELDEDARNWLANKGYDPAYGARPLKRVIQKAVQDRLAEMILG 837

Query: 563 SVIGKGSFVRL 573
             I  GS V++
Sbjct: 838 GEIPDGSRVKV 848


>gi|423663845|ref|ZP_17639014.1| chaperone ClpB [Bacillus cereus VDM022]
 gi|401295745|gb|EJS01369.1| chaperone ClpB [Bacillus cereus VDM022]
          Length = 866

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/325 (38%), Positives = 198/325 (60%), Gaps = 27/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKDIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           V ++LA      VI   S V + V+
Sbjct: 833 VETKLARELIAGVITDNSHVVVDVE 857


>gi|229010560|ref|ZP_04167762.1| Chaperone protein clpB 1 [Bacillus mycoides DSM 2048]
 gi|228750758|gb|EEM00582.1| Chaperone protein clpB 1 [Bacillus mycoides DSM 2048]
          Length = 866

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/325 (38%), Positives = 198/325 (60%), Gaps = 27/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           V ++LA      VI   S V + V+
Sbjct: 833 VETKLARELIAGVITDNSHVVVDVE 857


>gi|94985312|ref|YP_604676.1| ATPase AAA [Deinococcus geothermalis DSM 11300]
 gi|94555593|gb|ABF45507.1| ATPase AAA-2 [Deinococcus geothermalis DSM 11300]
          Length = 861

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 120/318 (37%), Positives = 197/318 (61%), Gaps = 28/318 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE++L +R++GQ+ AI  ++ AI+R   G  D + PL  F+FLG +G+GKT
Sbjct: 552 EGEREKLLRLEEQLHERVIGQDRAIVSVADAIRRARAGLNDPNRPLGSFMFLGPTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D  +A IR+DMSEY EKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 612 ELAKALAEFLF-DSPDAMIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEAVRRRPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSN+ S+ I +    
Sbjct: 671 SVILLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIGSHLILE---- 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                          ++++G +         ++ V+Q +L+ HF R EFL RI++I+ F 
Sbjct: 727 ---------------AQARGDS-----PESIREQVLQ-VLQAHF-RPEFLNRIDDIIVFD 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             + + LH +V  +L    ++  ++     + D   + +   GYD  +GAR +K  + R+
Sbjct: 765 ALTPANLHKIVEIQLGGLRRRLAERRVTLHLTDAAKDKLAQIGYDPAFGARPLKRVIARE 824

Query: 552 VVSQLAAAHEKSVIGKGS 569
           + + LA    +  + +GS
Sbjct: 825 IETPLAREILQGRVPEGS 842


>gi|408374171|ref|ZP_11171861.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           hongdengensis A-11-3]
 gi|407766056|gb|EKF74503.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           hongdengensis A-11-3]
          Length = 861

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 124/328 (37%), Positives = 195/328 (59%), Gaps = 31/328 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E+ +   +E+ L  R+VGQ+ A+  ++ A++R   G +D + P   FLFLG +G+GKT
Sbjct: 557 EGEKDKLLRMEEALHQRVVGQDEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELCKALANFLF-DTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S+        
Sbjct: 676 SVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSD-------- 727

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         I K  G N             V  ++  HF R EF+ R++E V F 
Sbjct: 728 -------------LIQKLAGDN-----DYEAMKAAVMEVVGNHF-RPEFINRVDETVVFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P  K +L  +   +L+F  +K L + +I + + D  +  ++  G+D  YGAR +K  +++
Sbjct: 769 PLQKDQLKGIASIQLDFL-RKRLAERDIRLELSDAALSKLVEAGFDPVYGARPLKRAIQQ 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           Q+ + LA A  K    +G  +R+ V  S
Sbjct: 828 QLENPLAQALLKGEFAQGDTIRVDVSES 855


>gi|217958749|ref|YP_002337297.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus AH187]
 gi|229137959|ref|ZP_04266558.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST26]
 gi|375283242|ref|YP_005103680.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus NC7401]
 gi|423354238|ref|ZP_17331864.1| chaperone ClpB [Bacillus cereus IS075]
 gi|423569805|ref|ZP_17546051.1| chaperone ClpB [Bacillus cereus MSX-A12]
 gi|217067573|gb|ACJ81823.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus AH187]
 gi|228645616|gb|EEL01849.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST26]
 gi|358351768|dbj|BAL16940.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus NC7401]
 gi|401087439|gb|EJP95643.1| chaperone ClpB [Bacillus cereus IS075]
 gi|401205343|gb|EJR12146.1| chaperone ClpB [Bacillus cereus MSX-A12]
          Length = 866

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEDDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|408786051|ref|ZP_11197790.1| ATP-dependent Clp protease, ATP-binding subunit [Rhizobium lupini
           HPC(L)]
 gi|408487921|gb|EKJ96236.1| ATP-dependent Clp protease, ATP-binding subunit [Rhizobium lupini
           HPC(L)]
          Length = 874

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 225/431 (52%), Gaps = 53/431 (12%)

Query: 154 TVHRTAAEKKMNPFEVLLKREDEFNDVL---NPNMTFLGFSALHYGVVAGNTEVVELLLK 210
           T    A ++K+     L KR DE  + L     N  F     L YG++ G       + K
Sbjct: 460 TARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQFQRAGELTYGIIPG-------IEK 512

Query: 211 SGADPTVKDNSG--HIPSDYAEDANIKQILQKYA----EKYADLQREKEAEERRKYPLEQ 264
             A    +D+SG   +  +     NI  ++ ++     +K  + QREK         +E 
Sbjct: 513 ELAAAEARDSSGAGSMVQEVVTADNIAHVVSRWTGIPVDKMLEGQREK------LLRMED 566

Query: 265 RLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHR 323
            L   +VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  
Sbjct: 567 ELAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLF- 625

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D + A +RLDMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P  VVLFDE++KAH
Sbjct: 626 DDETAMVRLDMSEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAH 685

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDV  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSNL S  + Q                
Sbjct: 686 PDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQ---------------- 729

Query: 444 PSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVC 503
                  G N DV   R      V   ++ HF R EFL RI++I+ F    + E+  +V 
Sbjct: 730 ------MGDNDDVDSVREL----VMERVRSHF-RPEFLNRIDDIILFHRLRRDEMGAIVE 778

Query: 504 RELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            +L       L    I++  D D    LA+ GYD  YGAR +K  +++ V  +LA     
Sbjct: 779 IQLKRLV-SLLGDRKISLELDEDARNWLANKGYDPAYGARPLKRVIQKAVQDRLAEMILG 837

Query: 563 SVIGKGSFVRL 573
             I  GS V++
Sbjct: 838 GEIPDGSRVKV 848


>gi|381163704|ref|ZP_09872934.1| ATP-dependent chaperone ClpB [Saccharomonospora azurea NA-128]
 gi|379255609|gb|EHY89535.1| ATP-dependent chaperone ClpB [Saccharomonospora azurea NA-128]
          Length = 868

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 124/313 (39%), Positives = 184/313 (58%), Gaps = 31/313 (9%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +E+ L  R+VGQ  A+ ++S A++R   G  D D P   FLFLG +G+GKTELAK LA +
Sbjct: 568 MEEELTKRVVGQTDAVKVVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKTELAKALAEF 627

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P +VVL DEV+
Sbjct: 628 LFDDER-AMLRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPYSVVLLDEVE 686

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA              
Sbjct: 687 KAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIAD------------- 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
              P++S +Q            +   V  ++++HF + EFL R+++IV F      +L  
Sbjct: 734 ---PTLSDTQ------------RRDSVMAVVQQHF-KPEFLNRLDDIVVFHALDTEQLGR 777

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAH 560
           +V  ++   AK+   +     V     E +   GYD  YGAR ++  V+  +  QLA   
Sbjct: 778 IVDIQIERLAKRLSQRRLTLEVTPAAREWLAITGYDPIYGARPLRRLVQSAIGDQLAKKL 837

Query: 561 EKSVIGKGSFVRL 573
               +  G  VR+
Sbjct: 838 LAGEVRDGDTVRV 850


>gi|402553341|ref|YP_006594612.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus FRI-35]
 gi|401794551|gb|AFQ08410.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus FRI-35]
          Length = 866

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEDDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|260771107|ref|ZP_05880034.1| ClpB protein [Vibrio furnissii CIP 102972]
 gi|260613704|gb|EEX38896.1| ClpB protein [Vibrio furnissii CIP 102972]
          Length = 857

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/342 (36%), Positives = 207/342 (60%), Gaps = 36/342 (10%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L K  +    + +  EAE+ +   +E  L  R++GQ  A+ +++ AI+R   G
Sbjct: 533 DAEIAEVLSK--QTGIPVAKMLEAEKEKLLRMEDVLHQRVIGQVEAVEVVANAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D ++A +R+DMSE+ EKH VA+L+GA
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I ++   L  +G                          K+ V++ 
Sbjct: 710 RNTVVIMTSNLGSSRIQENFASLDYQG-------------------------IKEQVME- 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ +HFR  EFL R++E V F P  +  + ++   +L    K+ L+K     V D  ++ 
Sbjct: 744 VVSKHFR-PEFLNRVDETVVFHPLGREHIKSIASIQLERLRKRLLEKDFELQVSDEALDL 802

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
           I   G+D  YGAR +K  +++ V + LA    KS++  G+F+
Sbjct: 803 IAQVGFDPVYGARPLKRAIQQNVENPLA----KSILA-GTFL 839


>gi|251788635|ref|YP_003003356.1| protein disaggregation chaperone [Dickeya zeae Ech1591]
 gi|247537256|gb|ACT05877.1| ATP-dependent chaperone ClpB [Dickeya zeae Ech1591]
          Length = 857

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 217/388 (55%), Gaps = 37/388 (9%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YG      ++ EL  +  A    +  + H+  +   DA I ++L ++      + 
Sbjct: 498 MSELQYG------KIPELEKQLAAATQAEGKTMHLLRNRVTDAEIAEVLARWT--GIPVS 549

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  E+E  +   +EQ L  R++GQ  A+  ++ +I+R   G +D + P+  FLFLG +G+
Sbjct: 550 RMLESEREKLLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGV 609

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++
Sbjct: 610 GKTELCKTLASFLF-DSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I   
Sbjct: 669 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI--- 725

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
                       +R   ++ SQ  ++ + I  H            HF R EF+ RI+E+V
Sbjct: 726 -----------QERFGEMNYSQMRDMVLGIVSH------------HF-RPEFINRIDEVV 761

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F P  +S + ++   +L    K+  ++     + D  +E +   G+D  YGAR +K  +
Sbjct: 762 VFHPLGQSHITSIAQIQLQRLYKRMEERGYTVSISDAALELLGKSGFDPVYGARPLKRAI 821

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           ++ + + LA       +  G  V L V+
Sbjct: 822 QQMIENPLAQKILSGALVPGKSVTLDVE 849


>gi|414153531|ref|ZP_11409854.1| Chaperone protein ClpB 2 [Desulfotomaculum hydrothermale Lam5 = DSM
           18033]
 gi|411454929|emb|CCO07758.1| Chaperone protein ClpB 2 [Desulfotomaculum hydrothermale Lam5 = DSM
           18033]
          Length = 865

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 197/331 (59%), Gaps = 28/331 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   L++ L  R++GQ+ A+  ++ A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 557 EGEKEKLIHLDKILHRRVIGQDQAVQAVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA  +  D++ + +RLDMSEY EKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 617 ELARALAEALFDDER-SLMRLDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAH DV  +LLQ+ D+GRLTDG+G+T+  K+ + +MTSN+ S EI    L 
Sbjct: 676 AVILFDEIEKAHQDVFNLLLQILDDGRLTDGQGRTVNFKNTVIIMTSNIGSQEI----LA 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            RK+G      +P     + +              V  +L++HF R EFL R++E V F 
Sbjct: 732 CRKQG------SPDYDGMKAA--------------VMSLLQQHF-RPEFLNRVDETVVFH 770

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
                 +  +    L   A++  +   +N++W     T LA  GY+  YGAR +K  +++
Sbjct: 771 GLELKHMQQITVLMLTRLAQRLQETARLNLLWTDKAVTYLAQKGYEPSYGARPLKRLIQQ 830

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           QV + L+    K  +  G  ++L VQ  + V
Sbjct: 831 QVETPLSRLMVKDEVKPGDTLQLDVQQGRPV 861


>gi|406672876|ref|ZP_11080101.1| ATP-dependent chaperone ClpB [Bergeyella zoohelcum CCUG 30536]
 gi|405587420|gb|EKB61148.1| ATP-dependent chaperone ClpB [Bergeyella zoohelcum CCUG 30536]
          Length = 866

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/291 (43%), Positives = 184/291 (63%), Gaps = 20/291 (6%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQE AI  ++ AI+R   G  D+  P+  FLFLG++G+GKTELAK LA ++  D+  
Sbjct: 565 RVVGQEEAIEAVANAIRRNRAGLNDEKKPIGSFLFLGTTGVGKTELAKALAEFLFDDENN 624

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQE H V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++KAHPDV 
Sbjct: 625 -MTRIDMSEYQEHHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVVLLDEIEKAHPDVF 683

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
             LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I  +         E ++ T S  
Sbjct: 684 NTLLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSHLIQDNF-------SEINEATTSFE 736

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
            S+       I    K  V   +LK+   R EFL RI+E V F P +KSE+  +V  +L 
Sbjct: 737 LSE-------IVEKTKTEVFD-LLKQTL-RPEFLNRIDETVLFQPLNKSEVGKIVQFQLR 787

Query: 508 FWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQVVSQLA 557
               K L+K NI +    D ++ IL+ GYD  +GAR +K  V++ V++QL+
Sbjct: 788 -GINKMLEKKNIILTATQDAIDFILSKGYDPAFGARPLKRVVQQMVLNQLS 837


>gi|375130115|ref|YP_004992214.1| clpB protein [Vibrio furnissii NCTC 11218]
 gi|315179288|gb|ADT86202.1| clpB protein [Vibrio furnissii NCTC 11218]
          Length = 857

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/342 (36%), Positives = 207/342 (60%), Gaps = 36/342 (10%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L K  +    + +  EAE+ +   +E  L  R++GQ  A+ +++ AI+R   G
Sbjct: 533 DAEIAEVLSK--QTGIPVAKMLEAEKEKLLRMEDVLHQRVIGQVEAVEVVANAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D ++A +R+DMSE+ EKH VA+L+GA
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I ++   L  +G                          K+ V++ 
Sbjct: 710 RNTVVIMTSNLGSSRIQENFASLDYQG-------------------------IKEQVME- 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ +HFR  EFL R++E V F P  +  + ++   +L    K+ L+K     V D  ++ 
Sbjct: 744 VVSKHFR-PEFLNRVDETVVFHPLGREHIKSIASIQLERLRKRLLEKDFELQVSDEALDL 802

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
           I   G+D  YGAR +K  +++ V + LA    KS++  G+F+
Sbjct: 803 IAQVGFDPVYGARPLKRAIQQNVENPLA----KSILA-GTFL 839


>gi|78060113|ref|YP_366688.1| ClpA/B protease, ATPase subunit [Burkholderia sp. 383]
 gi|77964663|gb|ABB06044.1| putative ClpA/B protease, ATPase subunit [Burkholderia sp. 383]
          Length = 949

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 192/305 (62%), Gaps = 25/305 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R+VGQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 575 EERQKLLKMEEQLRERVVGQSDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 634

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 635 LAKALAETVFGDE-QAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 693

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 694 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 752

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 753 ----PEAARKT---------------DKAIREELMQ-VLKGHF-RPEFLNRIDEVIVFHA 791

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ D  VE +   GY   +GAR +K ++ + +
Sbjct: 792 LSKENIRSIVQIQLDRVVRTAAAQDITLVMGDSLVEHLTEAGYQPEFGARELKRQIRQTI 851

Query: 553 VSQLA 557
            ++LA
Sbjct: 852 ETRLA 856


>gi|72383760|ref|YP_293114.1| AAA ATPase [Ralstonia eutropha JMP134]
 gi|72123103|gb|AAZ65257.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha
           JMP134]
          Length = 942

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 196/312 (62%), Gaps = 28/312 (8%)

Query: 251 EKEAEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGI 308
           E  AE+R K   LE RL++R+VGQ+ A++ ++ A++    G T+   P   FLFLG +G+
Sbjct: 610 ELTAEDREKLLRLEDRLRERVVGQDEAVSAVARAVRLSRAGLTEGGKPTASFLFLGPTGV 669

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAK LA  +  D + A +R+DMSEY E+H VA+L+G+PPGY+G+++GGQLT+R+++
Sbjct: 670 GKTELAKALAASVF-DDENALVRIDMSEYSERHTVARLVGSPPGYVGYEEGGQLTERVRR 728

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +VVL DE++KAH +V  +LLQLFDEGRLTDGKG+ ++  + I + TSN+ S  I  +
Sbjct: 729 RPYSVVLLDEIEKAHSEVHNILLQLFDEGRLTDGKGRLVDFTNTIIIATSNIGSQMIQDN 788

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
                              ++  + LD       +D +++ +L+ HF R EFL R++E+V
Sbjct: 789 M------------------RADKTQLDYPA---LRDRLME-VLRHHF-RPEFLNRVDEVV 825

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHE 547
            F    K+++ ++V  +L    + A  + NI + +D  +   LA+ GYD  +GAR +K +
Sbjct: 826 VFHALGKAQIRSIVDLQLARVQRTAA-RQNIELSFDDSLRNHLAEIGYDPEFGARLLKRK 884

Query: 548 VERQVVSQLAAA 559
           +  +V SQLA A
Sbjct: 885 IRAEVESQLADA 896


>gi|428318743|ref|YP_007116625.1| ATP-dependent chaperone ClpB [Oscillatoria nigro-viridis PCC 7112]
 gi|428242423|gb|AFZ08209.1| ATP-dependent chaperone ClpB [Oscillatoria nigro-viridis PCC 7112]
          Length = 871

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 185/306 (60%), Gaps = 31/306 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E ++   LE  L  R++GQ+ A+  ++ AI+R   G  D + P+  F+FLG +G+GKT
Sbjct: 560 ESEMQKLLHLEDELHKRVIGQDEAVTAVADAIQRSRAGLADPNRPVASFIFLGPTGVGKT 619

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +EA +R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 620 ELAKALAAYLF-DTEEAIVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAVRRRPY 678

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  ++LQ+ D+GR+TD +G T++ K+++ +MTSN+ S  I      
Sbjct: 679 SVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSVIIMTSNVGSQYI------ 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                 LDV          V   ++  F R EFL RI+E++ F 
Sbjct: 733 ----------------------LDVAGDNELMRSRVMEAMRGTF-RPEFLNRIDEMIIFH 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             SK+EL  +V  ++    K+  D+     + +  ++ +   GYD  YGAR +K  ++R+
Sbjct: 770 GLSKTELRQIVLLQVKRLEKRLADRKMSLKLSESAIDFLAEIGYDPVYGARPLKRGIQRE 829

Query: 552 VVSQLA 557
           + +Q+A
Sbjct: 830 LETQMA 835


>gi|302381391|ref|YP_003817214.1| ATP-dependent chaperone ClpB [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192019|gb|ADK99590.1| ATP-dependent chaperone ClpB [Brevundimonas subvibrioides ATCC
           15264]
          Length = 862

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 184/307 (59%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L+ R+VGQ++A+  ++ A++R   G  D + PL  FLFLG +G+GKT
Sbjct: 554 EGEREKLLSMEDALRGRVVGQDAALEAVADAVRRARAGLNDPNRPLGSFLFLGPTGVGKT 613

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D + A  R+DMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 614 ELTKALAAFLF-DDETAITRMDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPY 672

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+ ++ K+ + +MTSNL S+ +A  A  
Sbjct: 673 QVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRVVDFKNTLLIMTSNLGSDALANQA-- 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +GE                 DV   R F    V   ++ HF R EFL RI+EI+ F 
Sbjct: 731 ---DGE-----------------DVEAVRPF----VMDAVRAHF-RPEFLNRIDEIILFR 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              + ++  +V  +L    K   D+  + +  D      LAD GYD  YGAR +K  +++
Sbjct: 766 RLGRDQMAGIVRIQLARLEKLMADRR-LTLSIDDGALAWLADKGYDPVYGARPLKRVIQK 824

Query: 551 QVVSQLA 557
            +V  +A
Sbjct: 825 DLVDPMA 831


>gi|427391054|ref|ZP_18885460.1| ATP-dependent chaperone ClpB [Actinobaculum massiliae
           ACS-171-V-Col2]
 gi|425732392|gb|EKU95202.1| ATP-dependent chaperone ClpB [Actinobaculum massiliae
           ACS-171-V-Col2]
          Length = 921

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 184/297 (61%), Gaps = 31/297 (10%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKTELAKQLAFY 320
           LE+ +  R++GQE A+  +S A++R   G  D + P   F+FLG +G+GKTELAK LA +
Sbjct: 573 LEEEIGRRLIGQEQAVRTVSDAVRRSRAGVADPNRPDGSFMFLGPTGVGKTELAKALAEF 632

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D++ A +R+DMSEY EKH V++LIG+PPGY+G+++GGQLT+ +++ P +V+L DEV+
Sbjct: 633 LFDDER-AMVRIDMSEYAEKHTVSRLIGSPPGYVGYEEGGQLTEAVRRRPYSVILLDEVE 691

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I VMTSNL S  +A              
Sbjct: 692 KAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVMTSNLGSAALA-------------- 737

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
              P+++  Q            KD  V   ++ HF + EFL R+++IV F P S  ++  
Sbjct: 738 --NPALADEQ------------KDDAVMAEVRGHF-KPEFLNRLDDIVIFRPLSMEQIGQ 782

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +++   ++  ++     V     E +  DGYD  YGAR ++  ++R++  QLA
Sbjct: 783 IVDLQVSQLERRLAERRIHLDVTPAAREYLTLDGYDPAYGARPLRRLIQREIGDQLA 839


>gi|316935949|ref|YP_004110931.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris DX-1]
 gi|315603663|gb|ADU46198.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris DX-1]
          Length = 879

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 217/393 (55%), Gaps = 48/393 (12%)

Query: 208 LLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLK 267
           L K  AD    +N+G +  +     +I Q++ ++     D   E E E+  +  +E++L 
Sbjct: 511 LEKKLADIEAHENAGEMVEEAVTADHIAQVVSRWTGVPVDKMLEGEKEKLLR--MEEQLG 568

Query: 268 DRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKK 326
            R+VGQ  A++ +S A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D +
Sbjct: 569 QRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLF-DDE 627

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
            A +R+DMSE+ EKH VA+LIGAPPGY+G+D+GG LT+ +++ P  V+LFDE++KAHPDV
Sbjct: 628 TAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDV 687

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
             VLLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S  +         EGE+    T ++
Sbjct: 688 FNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQP-----EGED----TGAV 738

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
            +                  V  +++ HF R EFL R++EI+ F    KSE+  +V  + 
Sbjct: 739 REQ-----------------VMGMVRAHF-RPEFLNRVDEIILFHRLQKSEMGRIVDIQF 780

Query: 507 NFWAKKALDKHNINIVWDIDVET---ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKS 563
               K   D+    IV D+D      +   G+D  YGAR +K  ++R V   LA    + 
Sbjct: 781 ARLTKLLEDR---KIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEG 837

Query: 564 VIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVK 596
            +  G  V +           SA+GG++    K
Sbjct: 838 SVKDGDHVAI-----------SAEGGVLTFNGK 859


>gi|374386624|ref|ZP_09644122.1| chaperone ClpB [Odoribacter laneus YIT 12061]
 gi|373223574|gb|EHP45922.1| chaperone ClpB [Odoribacter laneus YIT 12061]
          Length = 863

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/311 (38%), Positives = 190/311 (61%), Gaps = 22/311 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  ++E ++   LEQ L  R+VGQ+ AI  ++ A++R   G  D   P+  F+FLG++
Sbjct: 546 VNRMMQSERQKLLSLEQELHRRVVGQDVAIAALADAVRRNRAGLQDAKRPIGSFIFLGTT 605

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA ++  D+ +   R+DMSEYQE+H V++LIGAPPGY+G+D+GGQLT+ +
Sbjct: 606 GVGKTELAKALAEFLFDDESQ-MTRIDMSEYQERHSVSRLIGAPPGYVGYDEGGQLTEAV 664

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+L DE++KAHPDV  +LLQ+ D+GRLTD KG+ ++ K+ I +MTSN     I 
Sbjct: 665 RRKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVDFKNTIIIMTSN-----IG 719

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
            H +Q + +      R   + K+                 V  +LK+   R EFL RI+E
Sbjct: 720 AHIIQEKLKDLNEKNRDEIVEKTNAE--------------VYEMLKQTI-RPEFLNRIDE 764

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           ++ F P  K+E+  +V  ++N   K   +   +  V D  VE I  +GYD  +GAR +K 
Sbjct: 765 VIMFTPLQKNEIVDIVRLQINGVNKMLANNGILLEVTDKAVEWIANEGYDPQFGARPVKR 824

Query: 547 EVERQVVSQLA 557
            ++R +++ L+
Sbjct: 825 IIQRTLLNDLS 835


>gi|377573468|ref|ZP_09802526.1| chaperone ClpB [Mobilicoccus pelagius NBRC 104925]
 gi|377537790|dbj|GAB47691.1| chaperone ClpB [Mobilicoccus pelagius NBRC 104925]
          Length = 890

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/368 (36%), Positives = 205/368 (55%), Gaps = 41/368 (11%)

Query: 214 DPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQ 273
           DP VKD  G      A+D  I +++  +    A   R  E E  +   +E  L +R++GQ
Sbjct: 519 DPMVKDEVG------ADD--IAEVISSWTGIPAG--RLLEGETEKLLHMESYLGERLIGQ 568

Query: 274 ESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRL 332
             A+  +S A++R   G  D D P   FLFLG +G+GKTELAK LA ++  D++ A +R+
Sbjct: 569 TDAVRAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKTELAKSLADFLFDDER-AMVRI 627

Query: 333 DMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQ 392
           DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+ +++ P +VVL DE++KAHP+   +LLQ
Sbjct: 628 DMSEYSERHAVARLIGAPPGYVGYDEGGQLTEAVRRRPYSVVLLDEIEKAHPETFDILLQ 687

Query: 393 LFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGS 452
           + D+GRLTDG+G+T++ ++ I VMTSNL S  +   +L            TP        
Sbjct: 688 VLDDGRLTDGQGRTVDFRNVILVMTSNLGSQFLVDESL------------TP-------- 727

Query: 453 NLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKK 512
                     K   V   ++  F + EFL R++E V F P S ++L  +V  ++    ++
Sbjct: 728 --------EAKRDAVMAAVRASF-KPEFLNRLDETVIFEPLSTADLSQIVDLQVQSLGRR 778

Query: 513 ALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVR 572
             D+     V D   E +   GYD  YGAR ++  V++++  +LA A     +  G  V 
Sbjct: 779 LADRRITLQVTDGAREWLALTGYDPAYGARPLRRLVQKEIGDRLAKALLGGEVRDGHVVE 838

Query: 573 LYVQWSKE 580
           + V  +++
Sbjct: 839 VDVDLAED 846


>gi|405354006|ref|ZP_11023415.1| ClpB protein [Chondromyces apiculatus DSM 436]
 gi|397092697|gb|EJJ23446.1| ClpB protein [Myxococcus sp. (contaminant ex DSM 436)]
          Length = 874

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/325 (39%), Positives = 194/325 (59%), Gaps = 32/325 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  E E ++   +E RL  R++GQ SAI  +S A++R  +G  D + P+  F+FLG +
Sbjct: 550 VSRLMEGEVQKLVHMEDRLAKRVIGQRSAIEAVSNAVRRARSGLQDPNRPIGSFIFLGPT 609

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTE AK LA ++  D   A +R+DMSEY EKH VA+L+GAPPGY+G+++GGQLT+ +
Sbjct: 610 GVGKTETAKALAEFLF-DDDSAMVRIDMSEYMEKHSVARLVGAPPGYVGYEEGGQLTEAV 668

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P  VVLFDE++KAH DV  VLLQ+ DEGRLTD +G+T++ K+ + ++TSNL S +I 
Sbjct: 669 RRRPYTVVLFDEIEKAHHDVFNVLLQILDEGRLTDSQGRTVDFKNTVLILTSNLGSQDI- 727

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           Q  +  ++E +E ++                         V   L+ HF R EFL R++E
Sbjct: 728 QAGMAGKEELDERTREE-----------------------VMDALRSHF-RPEFLNRVDE 763

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           +V F P  K +++ +V  +L   +K   DK     + +   E +   GYD  YGAR +K 
Sbjct: 764 VVIFEPLRKKDIYRIVDLQLARLSKLLADKRLTLELTEKARELLAERGYDPTYGARPLKR 823

Query: 547 EVERQVVSQLAAAHEKSVIGKGSFV 571
            V++ ++  LA      V+G G FV
Sbjct: 824 AVQKNLLDPLAL----KVLG-GEFV 843


>gi|269793011|ref|YP_003317915.1| ATPase AAA-2 domain-containing protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100646|gb|ACZ19633.1| ATPase AAA-2 domain protein [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 819

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/321 (37%), Positives = 199/321 (61%), Gaps = 21/321 (6%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E +R   +E+ +  R+VGQE A+N ++ AI+R  +G  D   P+  FLFLG +G+GKT
Sbjct: 503 EEEAKRLLRMEEEIHSRLVGQEEAVNAVARAIRRGRSGLKDPRRPVGSFLFLGPTGVGKT 562

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA++LA+++    ++A IR DMSE+ E+HEVAKLIGAPPGY+GH++GG+LT+ +++ P 
Sbjct: 563 ELARRLAWFLF-GSEDAMIRFDMSEFMERHEVAKLIGAPPGYVGHEEGGKLTEAVRRRPY 621

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQL ++GRLTDG+G  +  ++ + +MTSN+ ++E  +  L 
Sbjct: 622 SVILFDEIEKAHPDVFNILLQLLEDGRLTDGQGHLVNFRNTVIIMTSNVGASEGTRSHLG 681

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G+E  +      +++G+ +D               +KR F R EFL R++E+V F 
Sbjct: 682 F-SSGDE-DQAMAGWDRTRGAIMDA--------------VKRTF-RPEFLNRVDEMVVFR 724

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
           P  + EL  +    L+    +  ++  I++  D   VE +L +G+D  +GAR ++  ++R
Sbjct: 725 PLKREELRQIAAMMLDEVVARCGER-GISLAVDPQVVERVLDEGFDPKFGARPLRRTIQR 783

Query: 551 QVVSQLAAAHEKSVIGKGSFV 571
                L+    +  + +G+ V
Sbjct: 784 MTEDPLSDMMLEGKVPQGARV 804


>gi|260433267|ref|ZP_05787238.1| negative regulator of genetic competence ClpC/mecB [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417095|gb|EEX10354.1| negative regulator of genetic competence ClpC/mecB [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 940

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 205/331 (61%), Gaps = 31/331 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEE+ K   LE+RL +R++GQE AI  ++ A++    G  +   P   FLFLG +G+GKT
Sbjct: 596 AEEKDKLLKLEERLHERVIGQEEAIAAVADAVRLARAGLREGSGPTATFLFLGPTGVGKT 655

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  I  D+ +A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P 
Sbjct: 656 ELAKTLAEVIFGDE-DALLRIDMSEYGERHAVARLVGAPPGYVGYDEGGQLTEKVRRRPY 714

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I ++   
Sbjct: 715 SVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQKN--- 771

Query: 432 LRKEG-EEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
           L K G +EF +     +K +   ++V              L+ HF R EF+ RI+EI+ F
Sbjct: 772 LTKRGTKEFDE-----AKQKADLMEV--------------LRSHF-RPEFINRIDEIIVF 811

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVE 549
              ++SE+  +V  +LN  A+ AL +  I + +D  V +   A G+   +GAR ++  + 
Sbjct: 812 HSLNQSEIRQIVELQLNRVARTALGQ-GIELEYDESVLDHFAAVGFRPEFGARELRRLIR 870

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
            ++ ++LA       I  G  VR  V WS E
Sbjct: 871 SELETELAREMLSGRIEDGDKVR--VAWSAE 899


>gi|120556300|ref|YP_960651.1| ATPase [Marinobacter aquaeolei VT8]
 gi|120326149|gb|ABM20464.1| ATPase AAA-2 domain protein [Marinobacter aquaeolei VT8]
          Length = 949

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 27/317 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHAVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I +     
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKAG 777

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
              GEE+ K     +KS+                V  +L+ HF R EF+ RI+EI+ F  
Sbjct: 778 GAAGEEYVK-----TKSE----------------VMDVLRGHF-RPEFINRIDEIIVFHA 815

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  +
Sbjct: 816 LGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSE 874

Query: 552 VVSQLAAAHEKSVIGKG 568
           + + LA       IGKG
Sbjct: 875 LETALAREMLGGGIGKG 891


>gi|423481144|ref|ZP_17457834.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
 gi|401146660|gb|EJQ54174.1| chaperone ClpB [Bacillus cereus BAG6X1-2]
          Length = 866

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|39995764|ref|NP_951715.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens PCA]
 gi|409911208|ref|YP_006889673.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens KN400]
 gi|54035778|sp|Q74FF1.1|CLPB_GEOSL RecName: Full=Chaperone protein ClpB
 gi|39982528|gb|AAR33988.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens PCA]
 gi|298504774|gb|ADI83497.1| ATP-dependent chaperone ClpB [Geobacter sulfurreducens KN400]
          Length = 865

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/334 (36%), Positives = 201/334 (60%), Gaps = 30/334 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  E E  +   +E RL  R+VGQ+ A+ +++ AI+R  +G +D + P+  FLFLG +
Sbjct: 554 VSRMMEGEADKLVHMEDRLITRVVGQDEALVLVANAIRRARSGLSDPNRPIGSFLFLGPT 613

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTE AK LA ++  D  +A +R+DMSEYQEKH VA+LIGAPPGY+G+++GGQLT+ +
Sbjct: 614 GVGKTETAKALAEFLFNDD-QAIVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAV 672

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P ++VLFDE++KAHP+V  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  I 
Sbjct: 673 RRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQWIQ 732

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           Q+         ++++    ++++                     LK  F + EFL RI+E
Sbjct: 733 QYG------SSDYARMKAMVTET---------------------LKEGF-KPEFLNRIDE 764

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           IV +      ++  +V  ++    ++  D+  +  + D   E +  +GYD  YGAR +K 
Sbjct: 765 IVIYHALPLEQIKKIVDIQVECLKQRLADRRIVLELSDKAREYLSREGYDPAYGARPLKR 824

Query: 547 EVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
            ++R++   LA A  +    +G  VR+ +  S E
Sbjct: 825 TIQRKIQDPLALALLEGKFQEGDTVRVDLSVSGE 858


>gi|403388307|ref|ZP_10930364.1| negative regulator of genetic competence mecB/clpC [Clostridium sp.
           JC122]
          Length = 809

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 201/330 (60%), Gaps = 21/330 (6%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           +++  E E  R   LE+ L  R++GQ+ A+  IS A++R   G  D   P+  F+FLG +
Sbjct: 489 IEKLTETEATRLLKLEEILHGRVIGQDEAVESISKAVRRARVGLKDPKRPIGSFIFLGPT 548

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL K LA  +  D+    IR+DMSEY EKH V+KLIGAPPGY+G D+GGQLT+++
Sbjct: 549 GVGKTELTKALAQAMFGDENN-LIRIDMSEYMEKHSVSKLIGAPPGYVGFDEGGQLTEKV 607

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV   LLQ+ ++GRLTDGKGKT+  K+ I +MTSN+ +++I 
Sbjct: 608 RRNPYSVILFDEIEKAHPDVFNALLQILEDGRLTDGKGKTVNFKNTIIIMTSNVGASDI- 666

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                         K+  +I  ++ S    T     K+++++  LK  F R EFL RI++
Sbjct: 667 --------------KKQNTIGFAKNSLEASTGHEKMKENIMEK-LKLTF-RPEFLNRIDD 710

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIK 545
           I+ F   ++S+L  +V   LN  + + L + NINI +  + +  LA +G+D  YGAR ++
Sbjct: 711 IIVFHKLNESDLLKIVELMLNVLSDR-LQQQNINIKFSNEAKEFLAKEGFDPTYGARPLR 769

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
             + + +  +LA    K  +  G  V + V
Sbjct: 770 RAITKIIEDKLAEEILKGNVNTGDSVIVTV 799


>gi|418461913|ref|ZP_13032973.1| ATP-dependent chaperone ClpB [Saccharomonospora azurea SZMC 14600]
 gi|359738040|gb|EHK86952.1| ATP-dependent chaperone ClpB [Saccharomonospora azurea SZMC 14600]
          Length = 809

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/313 (39%), Positives = 184/313 (58%), Gaps = 31/313 (9%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +E+ L  R+VGQ  A+ ++S A++R   G  D D P   FLFLG +G+GKTELAK LA +
Sbjct: 509 MEEELTKRVVGQTDAVKVVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKTELAKALAEF 568

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P +VVL DEV+
Sbjct: 569 LFDDER-AMLRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPYSVVLLDEVE 627

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA              
Sbjct: 628 KAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIAD------------- 674

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
              P++S +Q            +   V  ++++HF + EFL R+++IV F      +L  
Sbjct: 675 ---PTLSDTQ------------RRDSVMAVVQQHF-KPEFLNRLDDIVVFHALDTEQLGR 718

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAH 560
           +V  ++   AK+   +     V     E +   GYD  YGAR ++  V+  +  QLA   
Sbjct: 719 IVDIQIERLAKRLSQRRLTLEVTPAAREWLAITGYDPIYGARPLRRLVQSAIGDQLAKKL 778

Query: 561 EKSVIGKGSFVRL 573
               +  G  VR+
Sbjct: 779 LAGEVRDGDTVRV 791


>gi|222081552|ref|YP_002540916.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
 gi|221726231|gb|ACM29320.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
          Length = 870

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/344 (38%), Positives = 199/344 (57%), Gaps = 35/344 (10%)

Query: 233 NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWT 292
           NI Q++ ++     D  +  E E+ +   +E+ L  R+VGQ  A+  +S A++R   G  
Sbjct: 534 NIAQVVSRWTGVPVD--KMLEGEKDKLLHMEEMLGKRVVGQAQAVRAVSTAVRRARAGLQ 591

Query: 293 DDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
           D   P+  F+FLG +G+GKTELAK LA ++  D + A +R+DMSE+ EKH VA+LIGAPP
Sbjct: 592 DPSRPIGSFMFLGPTGVGKTELAKALAEFMF-DDETAMVRIDMSEFMEKHSVARLIGAPP 650

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++
Sbjct: 651 GYVGYDEGGVLTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN 710

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPIL 471
            + +MTSN+ +  +         EGE+        S  +G               V  ++
Sbjct: 711 TLIIMTSNIGAEYLVNQ-----PEGEK-------TSMVRGE--------------VMTMV 744

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA-KKALDKHNINIVWDIDVETI 530
           + H  R EFL RI+ I+ F    KSE+  +V  E+ F   +K LD   I +  D    T 
Sbjct: 745 RAHL-RPEFLNRIDAIILFHRLQKSEMGQIV--EIQFARLRKILDDRKIELTLDAKGRTW 801

Query: 531 LAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
           LAD G+D  YGAR +K  ++R V   LA       +  GS V+L
Sbjct: 802 LADKGWDPAYGARPLKRVIQRYVQDPLAEMILAGDVRDGSTVKL 845


>gi|254427099|ref|ZP_05040806.1| ATPase, AAA family [Alcanivorax sp. DG881]
 gi|196193268|gb|EDX88227.1| ATPase, AAA family [Alcanivorax sp. DG881]
          Length = 863

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 190/307 (61%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E+ +   +E+ L DR+VGQ+ A+  ++ A++R   G +D + P   FLFLG +G+GKT
Sbjct: 554 EGEKDKLLRMEEALHDRVVGQDEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 613

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 614 ELCKALANFLF-DTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPY 672

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S+ I + A  
Sbjct: 673 SVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGA 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             + G ++     ++ +  GS        HF              R EF+ R++E V F 
Sbjct: 733 DAQSGSDYEAMKSAVMEVVGS--------HF--------------RPEFINRVDETVVFH 770

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +K +L  +   +L F  K+ L + +I +    +    L D G+D  YGAR +K  +++
Sbjct: 771 PLAKDQLKGIASIQLGFLQKR-LAERDIGLALSNEALDKLVDAGFDPVYGARPLKRAIQQ 829

Query: 551 QVVSQLA 557
           Q+ + LA
Sbjct: 830 QLENPLA 836


>gi|428224381|ref|YP_007108478.1| ATP-dependent chaperone ClpB [Geitlerinema sp. PCC 7407]
 gi|427984282|gb|AFY65426.1| ATP-dependent chaperone ClpB [Geitlerinema sp. PCC 7407]
          Length = 885

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/328 (36%), Positives = 202/328 (61%), Gaps = 19/328 (5%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + +  E+E ++   LE+ L  R++GQ+ A+  ++ AI+R   G
Sbjct: 539 EADIAEIISKWT--GIPVSKLVESEMQKLLNLEEELHQRVIGQDEAVTAVADAIQRSRAG 596

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P   F+FLG +G+GKTELAK LA ++  D ++A +R+DMSEY EKH V++LIGA
Sbjct: 597 LADPNRPTASFIFLGPTGVGKTELAKALAAFLF-DTEDAMVRIDMSEYMEKHTVSRLIGA 655

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+D+GGQLT+ +++ P +V+LFDE++KAHPDV  V+LQ+ D+GR+TD +G T++ 
Sbjct: 656 PPGYVGYDEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDF 715

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
            + I +MTSN+ S    Q+ L L          + ++S + G+  D       K  V+  
Sbjct: 716 TNTIIIMTSNIGS----QYILDL---------PSSAVSATSGTEDDTLQYEEMKSRVMDA 762

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +  R   R EFL RI+EI+ F    K+++  +V  +    +++  D+     + D  ++ 
Sbjct: 763 L--RSSFRPEFLNRIDEIIIFHRLYKTQIRQIVRLQTLRLSERLADRKMTLKLSDAALDF 820

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLA 557
           +   GYD  YGAR +K  ++R++ +Q+A
Sbjct: 821 LADVGYDPVYGARPLKRAIQRELETQIA 848


>gi|229101855|ref|ZP_04232569.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-28]
 gi|228681438|gb|EEL35601.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-28]
          Length = 866

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    +  +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESR-QLVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDSAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|410657195|ref|YP_006909566.1| ClpB protein [Dehalobacter sp. DCA]
 gi|410660230|ref|YP_006912601.1| ClpB protein [Dehalobacter sp. CF]
 gi|409019550|gb|AFV01581.1| ClpB protein [Dehalobacter sp. DCA]
 gi|409022586|gb|AFV04616.1| ClpB protein [Dehalobacter sp. CF]
          Length = 861

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/370 (36%), Positives = 214/370 (57%), Gaps = 39/370 (10%)

Query: 191 SALHYGVVAG-NTEVVEL-LLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADL 248
           + L YGV+     E+ EL  L SG + T+             +++I +I+ K+   +  +
Sbjct: 501 AELQYGVLPKLEKELAELEQLVSGRENTLLKQE-------VSESDIAEIVAKWT--HIPV 551

Query: 249 QREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSG 307
            +  E+E  +   +E+ L  R++GQ+ A+  ++ A++R   G  D + PL  FLFLG +G
Sbjct: 552 SKLLESEAEKLITMEENLHQRVIGQDKAVQAVADAVRRARTGLQDPNRPLGSFLFLGPTG 611

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           +GKTELAK LA ++  D ++A IR+DMSEY EKH VA+LIGAPPGY+G+D+GGQLT+ ++
Sbjct: 612 VGKTELAKALAEFLF-DNEQALIRIDMSEYMEKHSVARLIGAPPGYVGYDEGGQLTEAVR 670

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           + P AV+L DEV+KAH DV  VLLQL D+GRLTDG+G+ +  K+ + ++TSN+A  EI  
Sbjct: 671 RKPYAVILLDEVEKAHGDVFNVLLQLLDDGRLTDGQGRIVNFKNTVVILTSNIAGQEI-- 728

Query: 428 HALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEI 487
                R+  E  S                  SR      ++  L R+F R EF+ R++E 
Sbjct: 729 -----REMNENHS------------------SRELIRKTIEAELSRYF-RPEFINRLDET 764

Query: 488 VYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHE 547
           + F P  K +L  +V  +L+   K+  ++     + D  +  +  +GYD  +GAR +K  
Sbjct: 765 IIFDPLKKEDLVRIVEIQLDLLRKRLKERGLTLTLSDKALYMLTEEGYDPVFGARPLKRV 824

Query: 548 VERQVVSQLA 557
           +++++ + LA
Sbjct: 825 IQQRIQNPLA 834


>gi|390946430|ref|YP_006410190.1| ATP-dependent chaperone ClpB [Alistipes finegoldii DSM 17242]
 gi|390422999|gb|AFL77505.1| ATP-dependent chaperone ClpB [Alistipes finegoldii DSM 17242]
          Length = 865

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 192/307 (62%), Gaps = 23/307 (7%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A ER K   +E  L  R++GQE AI  IS A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 552 ASEREKLLHMEDELHRRVIGQEQAIAAISDAVRRSRAGLNDPRKPIGSFIFLGTTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D      R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 612 ELAKALAEFLFNDDS-MMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+T++ ++ I +MTSN+ S+ I Q    
Sbjct: 671 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFRNTIIIMTSNMGSH-IIQENFA 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GE+ +   P + +   + +DV             +LK+   + EFL RI+EIV F 
Sbjct: 730 AAFSGEKLA---PEVVEK--TRMDVI-----------DLLKQQL-KPEFLNRIDEIVMFE 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVER 550
           P ++ ++  +V  +L    ++ L +  I + + D   E I A GYD  YGAR +K  ++R
Sbjct: 773 PLTRRDIERIVDIQLG-AVRRMLAETGIRLEYSDKAREWIAAAGYDPLYGARPVKRTIQR 831

Query: 551 QVVSQLA 557
            +V++L+
Sbjct: 832 YIVNELS 838


>gi|37523146|ref|NP_926523.1| endopeptidase Clp ATP-binding chain B [Gloeobacter violaceus PCC
           7421]
 gi|54035799|sp|Q7NFE9.1|CLPB_GLOVI RecName: Full=Chaperone protein ClpB
 gi|35214149|dbj|BAC91518.1| clpB [Gloeobacter violaceus PCC 7421]
          Length = 872

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/306 (40%), Positives = 189/306 (61%), Gaps = 29/306 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           A ER K   LE  L  R+VGQE A+ I+S AI+R   G  D + P+  F+FLG +G+GKT
Sbjct: 560 ASEREKLLHLEDELHKRVVGQEEAVRIVSEAIQRSRAGLADPNRPIASFIFLGPTGVGKT 619

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D + A +R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 620 ELAKALASFLF-DDENAMVRIDMSEYMEKHSVSRLIGAPPGYVGYDEGGQLTEAVRRRPY 678

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVLFDE++KAH DV  VLLQ+ D+GR+TD +G+TI+ K+A+ +MTSN+ S+ I      
Sbjct: 679 AVVLFDEIEKAHNDVFNVLLQVLDDGRITDSQGRTIDFKNAVIIMTSNIGSDAI------ 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           LR  G +                        ++ V++  ++ HF R EFL R+++I+ F 
Sbjct: 733 LRLGGND------------------AYYEQMREEVMRA-MQVHF-RPEFLNRVDDIIIFR 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              + +L  +V  ++    K+  D+     + +  ++ I+  GYD  YGAR +K  ++ +
Sbjct: 773 NLRRDQLAAIVKLQIARLEKRLADRKITLKLSEAAIDYIVEAGYDPVYGARPLKRAIQNE 832

Query: 552 VVSQLA 557
           +V+ LA
Sbjct: 833 LVNPLA 838


>gi|423472842|ref|ZP_17449585.1| chaperone ClpB [Bacillus cereus BAG6O-2]
 gi|402427173|gb|EJV59284.1| chaperone ClpB [Bacillus cereus BAG6O-2]
          Length = 866

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|376265099|ref|YP_005117811.1| ClpB protein [Bacillus cereus F837/76]
 gi|364510899|gb|AEW54298.1| ClpB protein [Bacillus cereus F837/76]
          Length = 866

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ V+  +  R + R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRELVMGQL--RGYFRPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|428773610|ref|YP_007165398.1| ATP-dependent chaperone ClpB [Cyanobacterium stanieri PCC 7202]
 gi|428687889|gb|AFZ47749.1| ATP-dependent chaperone ClpB [Cyanobacterium stanieri PCC 7202]
          Length = 863

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/351 (37%), Positives = 207/351 (58%), Gaps = 36/351 (10%)

Query: 230 EDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKEN 289
           ++A+I +I+ K++     + +  E+E+ +   LE +L +R+VGQE A+  +S AI+R   
Sbjct: 538 QEADIAEIISKWS--GIPISKLVESEKEKLLHLEDQLHERVVGQEEAVTAVSEAIQRSRA 595

Query: 290 GWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIG 348
           G  D   P   F+FLG +G+GKTELAK LA  I  D ++A +R+DMSEY EKH V++L+G
Sbjct: 596 GLADPHRPTASFIFLGPTGVGKTELAKALA-QILFDTEDAIVRIDMSEYMEKHTVSRLMG 654

Query: 349 APPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIE 408
           APPGY+G+++GGQLT+ +++ P +VVLFDE++KAHPDV  V+LQ+ D+GRLTD +G+T++
Sbjct: 655 APPGYVGYEEGGQLTEAIRRRPYSVVLFDEIEKAHPDVFNVMLQILDDGRLTDSQGRTVD 714

Query: 409 CKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQ 468
            K+ I +MTSN+ S    Q+ L L  +  ++      +  +   N               
Sbjct: 715 FKNTIIIMTSNIGS----QYILDLAGDDAQYETMRTRVMDAMRDNF-------------- 756

Query: 469 PILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVE 528
                   R EFL RI+EI+ F    KS+L  +V  ++N   ++  ++    +  DI  E
Sbjct: 757 --------RPEFLNRIDEIIIFHSLKKSQLRHIVNLQVNRLRERLAEQ---KLALDIADE 805

Query: 529 TI--LAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            +  LAD GYD  YGAR +K  V+R + + +A A  K     G  + + V+
Sbjct: 806 ALDFLADIGYDPVYGARPLKRAVQRYLETAIAKAILKGEFKDGETINVTVE 856


>gi|419926281|ref|ZP_14444057.1| ATPase with chaperone activity, ATP-binding subunit [Escherichia
           coli 541-15]
 gi|432662900|ref|ZP_19898529.1| hypothetical protein A1WY_04330 [Escherichia coli KTE111]
 gi|388383042|gb|EIL44852.1| ATPase with chaperone activity, ATP-binding subunit [Escherichia
           coli 541-15]
 gi|431196732|gb|ELE95642.1| hypothetical protein A1WY_04330 [Escherichia coli KTE111]
          Length = 949

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 27/317 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
           R   +E  ++T +                     V  +L+ HF R EFL RI+EI+ F  
Sbjct: 777 RGAADEEYEKTKA--------------------EVMDVLRGHF-RPEFLNRIDEIIVFHA 815

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  +
Sbjct: 816 LGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSE 874

Query: 552 VVSQLAAAHEKSVIGKG 568
           + + LA       IGKG
Sbjct: 875 LETALAREMLGGGIGKG 891


>gi|421597229|ref|ZP_16040885.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium sp.
           CCGE-LA001]
 gi|404270657|gb|EJZ34681.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium sp.
           CCGE-LA001]
          Length = 879

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/344 (38%), Positives = 201/344 (58%), Gaps = 35/344 (10%)

Query: 217 VKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESA 276
            K+NSG +  +     +I Q++ ++     D   E E E+  K  +E++L  R+VGQ  A
Sbjct: 520 AKENSGEMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLK--MEEQLSKRVVGQAEA 577

Query: 277 INIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMS 335
           +  ++ A++R   G  D + P   F+FLG +G+GKTEL K LA Y+  D+  A +RLDMS
Sbjct: 578 VRAVATAVRRSRAGLQDPNRPTGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVRLDMS 636

Query: 336 EYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFD 395
           EY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLLQ+ D
Sbjct: 637 EYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLD 696

Query: 396 EGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD 455
           +GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S               
Sbjct: 697 DGRLTDGQGRTVDFRNTLIIMTSNLGSEYLVNQP-----EGEDTSA-------------- 737

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA-KKAL 514
                  ++ V+  +++ HF R EFL R++EI+ F    +SE+  +V  E+ F   +K L
Sbjct: 738 ------VREQVMG-MVRAHF-RPEFLNRVDEIILFHRLQRSEMGRIV--EIQFARLQKLL 787

Query: 515 DKHNINIVWD-IDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
               I +  D    + + A G+D  YGAR +K  ++R +   LA
Sbjct: 788 TDRKIVLTLDAAGRDWLAAKGWDPAYGARPLKRVIQRYLQDPLA 831


>gi|380694422|ref|ZP_09859281.1| endopeptidase Clp ATP-binding subunit B [Bacteroides faecis MAJ27]
          Length = 862

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ  AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQNEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK+   R EFL RI+E + FLP +++E+  
Sbjct: 727 -----MEKLSGSNKEEVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTETEIRQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + + + D  +  +   GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-GVQKMLAENGVELEMTDAALNFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|332293248|ref|YP_004431857.1| ATP-dependent chaperone ClpB [Krokinobacter sp. 4H-3-7-5]
 gi|332171334|gb|AEE20589.1| ATP-dependent chaperone ClpB [Krokinobacter sp. 4H-3-7-5]
          Length = 868

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 194/314 (61%), Gaps = 30/314 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           +Q+  + E  +   LE  L  R+VGQ  AI  +S A++R   G  D   P+  FLFLG++
Sbjct: 545 VQKMLQGEREKLLQLEDELHKRVVGQREAIVAVSDAVRRSRAGLQDQKKPIGSFLFLGTT 604

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +
Sbjct: 605 GVGKTELAKALAEYLF-DDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAV 663

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVL DE++KAHPD   VLLQ+ DEGRLTD KG+T + ++AI +MTSN+ S    
Sbjct: 664 RRRPYSVVLLDEIEKAHPDTFNVLLQVLDEGRLTDNKGRTADFRNAIIIMTSNMGS---- 719

Query: 427 QHALQLRKEGEEFSKRTPSISKS-QGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
            H ++ R E        P +  + + + +DV             +LK++  R EFL RI+
Sbjct: 720 -HIIKERFEA------IPDVDAAMESAKVDVL-----------GLLKQNI-RPEFLNRID 760

Query: 486 EIVYFLPFSKSELHTLVCRELNFWA-KKALDKHNINI-VWDIDVETILADGYDVHYGARS 543
           +IV F P ++ ++  +V  +L F   +K L + NI +      ++ I   G+   YGAR 
Sbjct: 761 DIVMFSPLTRKDIRDIV--KLQFKGIQKMLSQQNITLDATKQAIDFISEAGFQPEYGARP 818

Query: 544 IKHEVERQVVSQLA 557
           +K  ++R+V++QL+
Sbjct: 819 VKRAMQREVLNQLS 832


>gi|39937493|ref|NP_949769.1| endopeptidase Clp ATP-binding subunit B [Rhodopseudomonas palustris
           CGA009]
 gi|192293280|ref|YP_001993885.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris TIE-1]
 gi|54035765|sp|Q6N1H2.1|CLPB_RHOPA RecName: Full=Chaperone protein ClpB
 gi|39651352|emb|CAE29874.1| endopeptidase Clp: ATP-binding subunit B, clpB [Rhodopseudomonas
           palustris CGA009]
 gi|192287029|gb|ACF03410.1| ATP-dependent chaperone ClpB [Rhodopseudomonas palustris TIE-1]
          Length = 879

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 217/393 (55%), Gaps = 48/393 (12%)

Query: 208 LLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLK 267
           L K  A+    +NSG +  +     +I Q++ ++     D   E E E+  +  +E++L 
Sbjct: 511 LEKKIAEIEANENSGAMVEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLR--MEEQLG 568

Query: 268 DRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKK 326
            R+VGQ  A++ +S A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D +
Sbjct: 569 QRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLF-DDE 627

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
            A +R+DMSE+ EKH VA+LIGAPPGY+G+D+GG LT+ +++ P  V+LFDE++KAHPDV
Sbjct: 628 TAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDV 687

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
             VLLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S  +         EGE+    T ++
Sbjct: 688 FNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQ-----PEGED----TGAV 738

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
            +                  V  +++ HF R EFL R++EI+ F    KSE+  +V  + 
Sbjct: 739 REQ-----------------VMGMVRAHF-RPEFLNRVDEIILFHRLQKSEMGRIVDIQF 780

Query: 507 NFWAKKALDKHNINIVWDIDVET---ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKS 563
               K   D+    IV D+D      +   G+D  YGAR +K  ++R V   LA    + 
Sbjct: 781 ARLTKLLEDR---KIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEG 837

Query: 564 VIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVK 596
            +  G  V +           SA+GG++    K
Sbjct: 838 SVKDGDHVAI-----------SAEGGVLTFNGK 859


>gi|229084261|ref|ZP_04216544.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-44]
 gi|228699061|gb|EEL51763.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-44]
          Length = 868

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 190/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A+++++ A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQIIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D TI    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLQEDGTIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTTEIKGIVDKIVKELQGRLADRHISVELTESAKEFVVESGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           + ++LA
Sbjct: 833 IETKLA 838


>gi|374601023|ref|ZP_09674025.1| ATP-dependent chaperone ClpB [Myroides odoratus DSM 2801]
 gi|423326159|ref|ZP_17303998.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CIP 103059]
 gi|373912493|gb|EHQ44342.1| ATP-dependent chaperone ClpB [Myroides odoratus DSM 2801]
 gi|404604443|gb|EKB04075.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CIP 103059]
          Length = 861

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/307 (41%), Positives = 192/307 (62%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  IS A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLHLEDELHKRVVGQEEAIEAISDAVRRSRAGLQDPKKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEY E+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALATYLF-DDENAMTRIDMSEYSERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F          Q ++L+   S   K+ V+  +LK+   R EFL RI+E+V F 
Sbjct: 725 -----EKF---------EQINDLE-QASEEAKEEVLN-VLKQSV-RPEFLNRIDEVVMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
           P ++  +  +V  +L     K L + NI++    + +  LA  G+D  +GAR +K  V+R
Sbjct: 768 PLTQDNILQIVDIQLQ-GVMKMLSEQNIHLEATKEAKEFLARKGFDPQFGARPVKRVVQR 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNKLS 833


>gi|229056905|ref|ZP_04196301.1| Chaperone protein clpB 1 [Bacillus cereus AH603]
 gi|228720433|gb|EEL72006.1| Chaperone protein clpB 1 [Bacillus cereus AH603]
          Length = 866

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|420213021|ref|ZP_14718362.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM001]
 gi|394277269|gb|EJE21595.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM001]
          Length = 817

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LE  L  R++GQ  A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   + +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+GS+ +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGSDYETVRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NINI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKDELKEIVTMMVNKLTHR-LSEQNINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 767 RAIQKTVEDNLS 778


>gi|427714065|ref|YP_007062689.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 6312]
 gi|427378194|gb|AFY62146.1| ATP-dependent chaperone ClpB [Synechococcus sp. PCC 6312]
          Length = 873

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/333 (37%), Positives = 203/333 (60%), Gaps = 32/333 (9%)

Query: 227 DYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKR 286
           D   +++I +I+ K+      + +  E+E ++   LE  L  R+VGQ+ A+  ++ AI+R
Sbjct: 535 DEVTESDIAEIISKWT--GIPISKLVESEMQKLLNLEAELHQRVVGQDEAVTAVADAIQR 592

Query: 287 KENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAK 345
              G +D + P+  F+FLG +G+GKTELAK LA Y+  D +EA +R+DMSEY EKH V++
Sbjct: 593 SRAGLSDPNRPIASFIFLGPTGVGKTELAKALAAYLF-DTEEAMVRIDMSEYMEKHAVSR 651

Query: 346 LIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGK 405
           LIGAPPGY+G+D+GGQLT+ +++ P AVVLFDE++KAHPDV  V LQ+ D+GR+TD +G+
Sbjct: 652 LIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDAQGR 711

Query: 406 TIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDH 465
           T++ K+ I +MTSN+ S  I   A    + GE                         ++ 
Sbjct: 712 TVDFKNTILIMTSNIGSQYILDVAGDDSRYGE------------------------MRER 747

Query: 466 VVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD-KHNINIVWD 524
           V++  ++ HF R EFL R++E + F    K++L  ++  ++     +  D K ++N+  +
Sbjct: 748 VMEA-MRTHF-RPEFLNRVDEFIIFHSLKKAQLREIIKIQVQRLETRLQDRKMSLNLTPE 805

Query: 525 IDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
             ++ +   GYD  YGAR +K  +++Q+ +Q+A
Sbjct: 806 A-LDFLAEVGYDPVYGARPLKRAIQQQLETQIA 837


>gi|393766590|ref|ZP_10355145.1| ATP-dependent chaperone ClpB [Methylobacterium sp. GXF4]
 gi|392727908|gb|EIZ85218.1| ATP-dependent chaperone ClpB [Methylobacterium sp. GXF4]
          Length = 874

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 186/307 (60%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 555 EGEREKLLAMEEALAKRVVGQREAVEAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D   A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 615 ELTKALAGFLF-DDDTALVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL           
Sbjct: 674 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLLIMTSNL----------- 722

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G E+    P+   ++            ++ V+  +++ HF R EFL R++EI+ F 
Sbjct: 723 ----GAEYLVNQPAGEDTEA----------VREEVMN-VVRSHF-RPEFLNRVDEIILFH 766

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++SE+  +V  +L   A K L+   I +  D + +  LAD GYD  YGAR +K  +++
Sbjct: 767 RLARSEMGAIVEIQLGRLA-KLLEDRKITLDLDEEAKIWLADKGYDPAYGARPLKRVIQK 825

Query: 551 QVVSQLA 557
            V   LA
Sbjct: 826 NVQDPLA 832


>gi|423555991|ref|ZP_17532294.1| chaperone ClpB [Bacillus cereus MC67]
 gi|401195694|gb|EJR02644.1| chaperone ClpB [Bacillus cereus MC67]
          Length = 866

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|423486362|ref|ZP_17463044.1| chaperone ClpB [Bacillus cereus BtB2-4]
 gi|423492086|ref|ZP_17468730.1| chaperone ClpB [Bacillus cereus CER057]
 gi|423501122|ref|ZP_17477739.1| chaperone ClpB [Bacillus cereus CER074]
 gi|401153746|gb|EJQ61167.1| chaperone ClpB [Bacillus cereus CER074]
 gi|401157675|gb|EJQ65072.1| chaperone ClpB [Bacillus cereus CER057]
 gi|402439724|gb|EJV71725.1| chaperone ClpB [Bacillus cereus BtB2-4]
          Length = 866

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/325 (38%), Positives = 198/325 (60%), Gaps = 27/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKAESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           V ++LA      VI   S V + V+
Sbjct: 833 VETKLARELIAGVITDNSHVVVDVE 857


>gi|414078516|ref|YP_006997834.1| ATP-dependent chaperone ClpB [Anabaena sp. 90]
 gi|413971932|gb|AFW96021.1| ATP-dependent chaperone ClpB [Anabaena sp. 90]
          Length = 872

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/348 (35%), Positives = 211/348 (60%), Gaps = 32/348 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      L +  E+E+ +   LE  L  R+VGQ  A+  ++ AI+R   G
Sbjct: 539 EADIAEIISKWT--GIPLNKLVESEKEKLLHLEDELHHRVVGQHEAVTAVADAIQRSRAG 596

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  F+FLG +G+GKTELAK LA Y+  D +EA +R+DMSEY +KH V++LIGA
Sbjct: 597 LSDPNRPIASFVFLGPTGVGKTELAKALAAYMF-DTEEALVRIDMSEYMDKHNVSRLIGA 655

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P AV+LFDE++KAHPDV  + LQ+ D+GR+TD +G+T++ 
Sbjct: 656 PPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGRTVDF 715

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K++I +MTSN+ S    Q+ L +  +   + +                     ++ V++ 
Sbjct: 716 KNSIIIMTSNIGS----QYILDISGDDTRYDE--------------------MRNRVMEA 751

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +  R   R EFL R++E++ F    KSEL  +V  +++   ++ +D+  I++        
Sbjct: 752 M--RSSFRPEFLNRLDELIIFHSLQKSELRNIVQLQVDRLKQRLIDR-KISLKLSSSALD 808

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            LA+ GYD  +GAR +K  ++R++ +Q+A A  +     G  + + VQ
Sbjct: 809 FLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGDFSDGDTIFVDVQ 856


>gi|416127894|ref|ZP_11597159.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
           epidermidis FRI909]
 gi|418328513|ref|ZP_12939624.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis 14.1.R1.SE]
 gi|418631361|ref|ZP_13193825.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU128]
 gi|418634140|ref|ZP_13196536.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU129]
 gi|420178488|ref|ZP_14684819.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM057]
 gi|420179587|ref|ZP_14685875.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM053]
 gi|420191066|ref|ZP_14697002.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM037]
 gi|420200939|ref|ZP_14706577.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM031]
 gi|420203524|ref|ZP_14709086.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM015]
 gi|420233736|ref|ZP_14738315.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH051475]
 gi|319399727|gb|EFV87976.1| negative regulator of genetic competence clpC/mecB [Staphylococcus
           epidermidis FRI909]
 gi|365231831|gb|EHM72848.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis 14.1.R1.SE]
 gi|374835462|gb|EHR99072.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU128]
 gi|374837442|gb|EHS01006.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU129]
 gi|394246423|gb|EJD91681.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM057]
 gi|394253576|gb|EJD98581.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM053]
 gi|394258024|gb|EJE02919.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM037]
 gi|394267420|gb|EJE12013.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM031]
 gi|394274485|gb|EJE18901.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM015]
 gi|394304910|gb|EJE48301.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH051475]
          Length = 817

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LE  L  R++GQ  A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   + +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+GS+ +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGSDYETVRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NINI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKDELKEIVTMMVNKLTHR-LSEQNINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 767 RAIQKTVEDNLS 778


>gi|291086328|ref|ZP_06355437.2| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
           29220]
 gi|291068913|gb|EFE07022.1| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
           29220]
          Length = 861

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/347 (36%), Positives = 205/347 (59%), Gaps = 33/347 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E E  +   +EQ L  R++GQ  A+  +S AI+R   G
Sbjct: 537 DAEIAEVLARWT--GIPVARMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 595 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMVRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD +   H KD V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYS---HMKDMVLGV 748

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 749 V--SHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKR-LEERGYEIHISDEALK 805

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
            + A+GYD  YGAR +K  +++Q+ + LA       +  G  +RL V
Sbjct: 806 LLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKTIRLEV 852


>gi|291515290|emb|CBK64500.1| ATP-dependent chaperone ClpB [Alistipes shahii WAL 8301]
          Length = 865

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 189/310 (60%), Gaps = 29/310 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A ER K   +E  L  R++GQE AI  IS A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 552 ASEREKLLHMEDELHKRVIGQEQAIAAISDAVRRSRAGLNDPRKPIGSFIFLGTTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D  +   R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 612 ELAKALAEFLFNDD-QMMTRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH--- 428
           +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+T++ ++ I +MTSN+ S  I  +   
Sbjct: 671 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFRNTIIIMTSNMGSQVIQDNFAE 730

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
           A   RK  EE  +RT                       V  +LK+   + EFL RI+EIV
Sbjct: 731 AFDGRKLPEEVVERTR--------------------LAVIDLLKQQL-KPEFLNRIDEIV 769

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHE 547
            F P +  ++  +V  +L    ++ L ++ I + + D   E I + GYD  YGAR +K  
Sbjct: 770 MFEPLTHKDIERIVDIQLGI-VRRMLSENGIRLEYSDKAREWIASAGYDPLYGARPVKRV 828

Query: 548 VERQVVSQLA 557
           ++R VV+ L+
Sbjct: 829 IQRYVVNDLS 838


>gi|418614178|ref|ZP_13177162.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU118]
 gi|374821459|gb|EHR85520.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU118]
          Length = 817

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LE  L  R++GQ  A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   + +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+GS+ +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGSDYETVRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NINI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKDELKEIVTMMVNKLTHR-LSEQNINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 767 RAIQKTVEDNLS 778


>gi|302864673|ref|YP_003833310.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
 gi|302567532|gb|ADL43734.1| ATP-dependent chaperone ClpB [Micromonospora aurantiaca ATCC 27029]
          Length = 863

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 199/330 (60%), Gaps = 33/330 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L+ R+VGQ  A+  +S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 558 EGETAKLLRMEETLRGRVVGQAEAVGAVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 618 ELAKALAEFLFDDER-AMVRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++AI ++TSNL S+ I+     
Sbjct: 677 SVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNAILILTSNLGSSVIS----- 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                  D+T++ + +   V  +++ HF + EFL R+++IV F 
Sbjct: 732 -----------------------DLTLTENERREGVLAVVRSHF-KPEFLNRLDDIVVFA 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
                +L ++V  +L+   ++  D+     + D    T LA+ GYD  YGAR ++  V+ 
Sbjct: 768 ALQGEDLRSIVDIQLDRMRRRLADRRLGLEITDA-ARTWLAEHGYDPIYGARPLRRLVQS 826

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
            +  QLA A     I  G  VR+ +  SKE
Sbjct: 827 AIGDQLAKALLAGDIRDGDTVRVDLSDSKE 856


>gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium
           japonicum USDA 110]
 gi|54035839|sp|Q89UL2.1|CLPB_BRAJA RecName: Full=Chaperone protein ClpB
 gi|27349656|dbj|BAC46669.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 879

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/348 (37%), Positives = 202/348 (58%), Gaps = 35/348 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD   K+NSG +  +     +I Q++ ++     D  +  E E+ +   +E  L  R+VG
Sbjct: 516 ADIEAKENSGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLKMEDSLGKRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A++ ++ A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+  A +R
Sbjct: 574 QAEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S           
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSA---------- 737

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA- 510
                      ++ V+  +++ HF R EFL R++EI+ F    +SE+  +V  E+ F   
Sbjct: 738 ----------VREQVMG-MVRGHF-RPEFLNRVDEIILFHRLQRSEMGRIV--EIQFARL 783

Query: 511 KKALDKHNINIVWDIDVETIL-ADGYDVHYGARSIKHEVERQVVSQLA 557
           +K L    I +  D      L A G+D  YGAR +K  ++R +   LA
Sbjct: 784 QKLLTDRKIVLTLDGAARDWLAAKGWDPAYGARPLKRVIQRYLQDPLA 831


>gi|27467205|ref|NP_763842.1| endopeptidase [Staphylococcus epidermidis ATCC 12228]
 gi|57866102|ref|YP_187761.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus epidermidis RP62A]
 gi|242241856|ref|ZP_04796301.1| ClpB ATPase [Staphylococcus epidermidis W23144]
 gi|293367900|ref|ZP_06614538.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|417658249|ref|ZP_12307885.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU045]
 gi|417910375|ref|ZP_12554097.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU037]
 gi|418604270|ref|ZP_13167628.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU041]
 gi|418606457|ref|ZP_13169734.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU057]
 gi|418609533|ref|ZP_13172675.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU065]
 gi|418611880|ref|ZP_13174943.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU117]
 gi|418626332|ref|ZP_13188945.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU126]
 gi|420166780|ref|ZP_14673460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM088]
 gi|420175670|ref|ZP_14682104.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM061]
 gi|420193494|ref|ZP_14699346.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM023]
 gi|420196769|ref|ZP_14702508.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM020]
 gi|420218753|ref|ZP_14723807.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH04008]
 gi|420222653|ref|ZP_14727570.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH08001]
 gi|420225510|ref|ZP_14730340.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH06004]
 gi|420226413|ref|ZP_14731197.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH05003]
 gi|420228732|ref|ZP_14733449.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH04003]
 gi|420231100|ref|ZP_14735755.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH051668]
 gi|81675398|sp|Q5HRM8.1|CLPC_STAEQ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|81843102|sp|Q8CQ88.1|CLPC_STAES RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|27314747|gb|AAO03884.1|AE016744_287 endopeptidase [Staphylococcus epidermidis ATCC 12228]
 gi|57636760|gb|AAW53548.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus epidermidis RP62A]
 gi|242234634|gb|EES36946.1| ClpB ATPase [Staphylococcus epidermidis W23144]
 gi|291317929|gb|EFE58337.1| conserved hypothetical protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329738043|gb|EGG74264.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU045]
 gi|341650550|gb|EGS74370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU037]
 gi|374405287|gb|EHQ76229.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU041]
 gi|374406860|gb|EHQ77735.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU065]
 gi|374407864|gb|EHQ78709.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU057]
 gi|374821395|gb|EHR85458.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU117]
 gi|374832889|gb|EHR96592.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU126]
 gi|394232700|gb|EJD78313.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM088]
 gi|394242848|gb|EJD88226.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM061]
 gi|394259936|gb|EJE04764.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM023]
 gi|394267271|gb|EJE11872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM020]
 gi|394288915|gb|EJE32813.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH08001]
 gi|394291827|gb|EJE35612.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH04008]
 gi|394293577|gb|EJE37291.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH06004]
 gi|394298789|gb|EJE42351.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH05003]
 gi|394300195|gb|EJE43711.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH04003]
 gi|394303175|gb|EJE46603.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH051668]
          Length = 817

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LE  L  R++GQ  A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   + +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+GS+ +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGSDYETVRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NINI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKDELKEIVTMMVNKLTHR-LSEQNINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 767 RAIQKTVEDNLS 778


>gi|423455303|ref|ZP_17432156.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
 gi|401134602|gb|EJQ42215.1| chaperone ClpB [Bacillus cereus BAG5X1-1]
          Length = 866

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|300919756|ref|ZP_07136237.1| ATPase family protein, partial [Escherichia coli MS 115-1]
 gi|300413192|gb|EFJ96502.1| ATPase family protein [Escherichia coli MS 115-1]
          Length = 905

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 27/317 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
           R   +E  ++T +                     V  +L+ HF R EFL RI+EI+ F  
Sbjct: 777 RGAADEEYEKTKA--------------------EVMDVLRGHF-RPEFLNRIDEIIVFHA 815

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  +
Sbjct: 816 LGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSE 874

Query: 552 VVSQLAAAHEKSVIGKG 568
           + + LA       IGKG
Sbjct: 875 LETALAREMLGGGIGKG 891


>gi|432368279|ref|ZP_19611385.1| hypothetical protein WCM_02222 [Escherichia coli KTE10]
 gi|432483994|ref|ZP_19725921.1| hypothetical protein A15Y_00463 [Escherichia coli KTE212]
 gi|432532475|ref|ZP_19769481.1| hypothetical protein A193_00923 [Escherichia coli KTE234]
 gi|433172104|ref|ZP_20356671.1| hypothetical protein WGQ_00371 [Escherichia coli KTE232]
 gi|430889171|gb|ELC11840.1| hypothetical protein WCM_02222 [Escherichia coli KTE10]
 gi|431019431|gb|ELD32832.1| hypothetical protein A15Y_00463 [Escherichia coli KTE212]
 gi|431064651|gb|ELD73516.1| hypothetical protein A193_00923 [Escherichia coli KTE234]
 gi|431696724|gb|ELJ61881.1| hypothetical protein WGQ_00371 [Escherichia coli KTE232]
          Length = 960

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 27/317 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
           R   +E  ++T +                     V  +L+ HF R EFL RI+EI+ F  
Sbjct: 777 RGAADEEYEKTKA--------------------EVMDVLRGHF-RPEFLNRIDEIIVFHA 815

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  +
Sbjct: 816 LGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSE 874

Query: 552 VVSQLAAAHEKSVIGKG 568
           + + LA       IGKG
Sbjct: 875 LETALAREMLGGGIGKG 891


>gi|400178625|gb|AFP72858.1| ATP-dependent chaperone ClpB, partial [uncultured bacterium]
          Length = 620

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/325 (36%), Positives = 193/325 (59%), Gaps = 29/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E+ +   +E+RL+ R+VGQ  A+  +S AI+R   G +D   P   FLFLG +G+GKT
Sbjct: 312 EGEKEKLLKMEERLQTRVVGQSEAVAAVSNAIRRSRAGLSDPRRPNGSFLFLGPTGVGKT 371

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL+K LA ++  D ++  IR+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 372 ELSKALAEFLF-DSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 430

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S+ I      
Sbjct: 431 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRI------ 484

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                +EF +      K     + V +    +DH           R EFL RI+E+V F 
Sbjct: 485 -----QEFGR------KGDYDGMRVAVMDVVQDHF----------RPEFLNRIDELVIFH 523

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  +L  +   ++ F   +  ++    ++ D  ++ +   GYD  YGAR +K  ++R+
Sbjct: 524 PLTAVQLREITEIQMGFLRARLRERDMGLVLSDGALDRLAEVGYDPAYGARPLKRVIQRE 583

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + + LA    +   G G  + + ++
Sbjct: 584 IENPLAQQLLRGDFGPGEIIEVLLE 608


>gi|320157323|ref|YP_004189702.1| ClpB protein [Vibrio vulnificus MO6-24/O]
 gi|319932635|gb|ADV87499.1| ClpB protein [Vibrio vulnificus MO6-24/O]
          Length = 857

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/307 (37%), Positives = 193/307 (62%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E+ L  R++GQ+ A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEEVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAM 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G                          K+ V++ ++ +HF R EFL R++E V F 
Sbjct: 732 LDYQG-------------------------IKEQVME-VVTKHF-RPEFLNRVDETVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P  +  + ++   +L   A + +++H   + V D  +E I   G+D  YGAR +K  +++
Sbjct: 765 PLGQDHIKSIAAIQLKRLANR-MEEHGYQLEVSDKALELIAQVGFDPVYGARPLKRAIQQ 823

Query: 551 QVVSQLA 557
            + + LA
Sbjct: 824 SIENPLA 830


>gi|251809941|ref|ZP_04824414.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875025|ref|ZP_06283900.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis SK135]
 gi|417646131|ref|ZP_12296010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU144]
 gi|417657343|ref|ZP_12307008.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU028]
 gi|417911486|ref|ZP_12555191.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU105]
 gi|417914018|ref|ZP_12557673.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU109]
 gi|418326361|ref|ZP_12937547.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU071]
 gi|418412965|ref|ZP_12986212.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           epidermidis BVS058A4]
 gi|418617569|ref|ZP_13180460.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU120]
 gi|418621530|ref|ZP_13184299.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU123]
 gi|418624700|ref|ZP_13187370.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU125]
 gi|418629608|ref|ZP_13192105.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU127]
 gi|418664665|ref|ZP_13226132.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU081]
 gi|419770348|ref|ZP_14296428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-250]
 gi|419772786|ref|ZP_14298812.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-K]
 gi|420169340|ref|ZP_14675941.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM087]
 gi|420171652|ref|ZP_14678190.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM070]
 gi|420172258|ref|ZP_14678768.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM067]
 gi|420182216|ref|ZP_14688354.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM049]
 gi|420186453|ref|ZP_14692521.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM040]
 gi|420188161|ref|ZP_14694175.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM039]
 gi|420195785|ref|ZP_14701572.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM021]
 gi|420203004|ref|ZP_14708590.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM018]
 gi|420207055|ref|ZP_14712558.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM008]
 gi|420208689|ref|ZP_14714147.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM003]
 gi|420213834|ref|ZP_14719116.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH05005]
 gi|420218208|ref|ZP_14723306.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH05001]
 gi|421607888|ref|ZP_16049122.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus epidermidis AU12-03]
 gi|251806484|gb|EES59141.1| ClpB ATPase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296353|gb|EFA88872.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis SK135]
 gi|329729477|gb|EGG65880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU144]
 gi|329734648|gb|EGG70955.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU028]
 gi|341653063|gb|EGS76836.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU105]
 gi|341653849|gb|EGS77614.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU109]
 gi|365225772|gb|EHM67010.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU071]
 gi|374410321|gb|EHQ81080.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU081]
 gi|374817996|gb|EHR82168.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU120]
 gi|374826897|gb|EHR90773.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU125]
 gi|374828761|gb|EHR92586.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU123]
 gi|374833371|gb|EHR97059.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis VCU127]
 gi|383357294|gb|EID34769.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-250]
 gi|383358879|gb|EID36321.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-K]
 gi|394231370|gb|EJD77000.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM087]
 gi|394237114|gb|EJD82609.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM070]
 gi|394242898|gb|EJD88275.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM067]
 gi|394250200|gb|EJD95394.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM049]
 gi|394252169|gb|EJD97210.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM040]
 gi|394255421|gb|EJE00372.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM039]
 gi|394262906|gb|EJE07658.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM021]
 gi|394268877|gb|EJE13428.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM018]
 gi|394276375|gb|EJE20716.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM008]
 gi|394281390|gb|EJE25639.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM003]
 gi|394284232|gb|EJE28386.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH05005]
 gi|394284688|gb|EJE28790.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIH05001]
 gi|406656502|gb|EKC82907.1| ATP-dependent Clp protease, ATP-binding subunit ClpC
           [Staphylococcus epidermidis AU12-03]
 gi|410879558|gb|EKS27399.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           epidermidis BVS058A4]
          Length = 817

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LE  L  R++GQ  A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   + +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+GS+ +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGSDYETVRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NINI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKDELKEIVTMMVNKLTHR-LSEQNINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 767 RAIQKTVEDNLS 778


>gi|374293211|ref|YP_005040246.1| ATP-dependent chaperone [Azospirillum lipoferum 4B]
 gi|357425150|emb|CBS88033.1| ATP-dependent chaperone [Azospirillum lipoferum 4B]
          Length = 867

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/371 (36%), Positives = 208/371 (56%), Gaps = 49/371 (13%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPS----DYAEDANIKQILQKYAEKYADL 248
           L YGV+             G +  +KD   H  S    +   D +I  ++ ++     D 
Sbjct: 503 LAYGVI------------PGLEKALKDAEAHASSRMLNEEVRDGDIAAVVSRWTGVPVD- 549

Query: 249 QREKEAEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
             +  A ER K   +E +L+ R++GQ+ AI  +S A++R   G  D + P+  FLFLG +
Sbjct: 550 --KMLAGEREKLLAMEDKLRGRVIGQDEAIVAVSNAVRRARAGLQDPNRPIGSFLFLGPT 607

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL K LA ++  D + A +RLDMSEY EKH VA++IGAPPGY+G+++GG LT+ +
Sbjct: 608 GVGKTELTKALAEFLF-DDETAMVRLDMSEYMEKHSVARMIGAPPGYVGYEEGGALTEAV 666

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P  VVLFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +A
Sbjct: 667 RRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNVVIIMTSNLGSQALA 726

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           +       EGE+                    S   ++ V++ + + HF R EFL R++E
Sbjct: 727 EQ-----PEGED--------------------SAAVREEVMEAV-RAHF-RPEFLNRLDE 759

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           I+ F    +  +  +V  +L    K   D+     V +   E +   GYD  YGAR +K 
Sbjct: 760 ILLFHRLDRRHMGGIVKIQLGRLTKMLADREITLTVDEAATEWLAEAGYDPVYGARPLKR 819

Query: 547 EVERQVVSQLA 557
            ++R++ + +A
Sbjct: 820 VIQRELQNPMA 830


>gi|409100927|ref|ZP_11220951.1| ATP-dependent chaperone ClpB, partial [Pedobacter agri PB92]
          Length = 845

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/315 (40%), Positives = 191/315 (60%), Gaps = 41/315 (13%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A ER K   LEQ L  R+ GQ+ AI  IS AI+R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 ASEREKLLNLEQELHQRVAGQDEAIEAISDAIRRSRAGLQDKRKPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D+  A  R+DMSEYQE+H V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEFLFNDEN-ALTRIDMSEYQERHAVSRLIGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ ++ I  +   
Sbjct: 670 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNIGAHLIQDNFKN 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  E      R   I+K++    +V              LK+   R EFL RI+E++ F 
Sbjct: 730 LSDEN-----RDEVIAKTKNELFEV--------------LKQTI-RPEFLNRIDELIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD---------GYDVHYGAR 542
           P ++SE+  +V   L F       KH    + ++ +E   +D         GYD  +GAR
Sbjct: 770 PLNRSEIRDIVA--LQF-------KHVQQTLAEMGIEMEASDEALDWLAQLGYDPQFGAR 820

Query: 543 SIKHEVERQVVSQLA 557
            +K  ++++++++L+
Sbjct: 821 PLKRVIQKRILNELS 835


>gi|432529654|ref|ZP_19766702.1| hypothetical protein A191_02904 [Escherichia coli KTE233]
 gi|431057350|gb|ELD66801.1| hypothetical protein A191_02904 [Escherichia coli KTE233]
          Length = 971

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 194/317 (61%), Gaps = 27/317 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
           R   +E         K++   +DV              L+ HF R EFL RI+EI+ F  
Sbjct: 777 RGAADE------EYEKTKAEVMDV--------------LRGHF-RPEFLNRIDEIIVFHA 815

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  +
Sbjct: 816 LGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSE 874

Query: 552 VVSQLAAAHEKSVIGKG 568
           + + LA       IGKG
Sbjct: 875 LETALAREMLGGGIGKG 891


>gi|423601390|ref|ZP_17577390.1| chaperone ClpB [Bacillus cereus VD078]
 gi|401230817|gb|EJR37323.1| chaperone ClpB [Bacillus cereus VD078]
          Length = 866

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|386703501|ref|YP_006167348.1| chaperone ATPase [Escherichia coli P12b]
 gi|432669215|ref|ZP_19904766.1| hypothetical protein A1Y7_00752 [Escherichia coli KTE119]
 gi|383101669|gb|AFG39178.1| ATPase with chaperone activity, ATP-binding subunit [Escherichia
           coli P12b]
 gi|431214145|gb|ELF11980.1| hypothetical protein A1Y7_00752 [Escherichia coli KTE119]
          Length = 949

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 27/317 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
           R   +E  ++T +                     V  +L+ HF R EFL RI+EI+ F  
Sbjct: 777 RGAADEEYEKTKA--------------------EVMDVLRGHF-RPEFLNRIDEIIVFHA 815

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  +
Sbjct: 816 LGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSE 874

Query: 552 VVSQLAAAHEKSVIGKG 568
           + + LA       IGKG
Sbjct: 875 LETALAREMLGGGIGKG 891


>gi|423643675|ref|ZP_17619293.1| chaperone ClpB [Bacillus cereus VD166]
 gi|401272887|gb|EJR78876.1| chaperone ClpB [Bacillus cereus VD166]
          Length = 866

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 186/306 (60%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFFFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLLD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             +E     + +  +   Q                    L+ HF R EFL R++EI+ F 
Sbjct: 734 GLEEDGSIKEESRVLVMGQ--------------------LRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + D   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTDAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|171320392|ref|ZP_02909429.1| ATPase AAA-2 domain protein [Burkholderia ambifaria MEX-5]
 gi|171094369|gb|EDT39438.1| ATPase AAA-2 domain protein [Burkholderia ambifaria MEX-5]
          Length = 950

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/353 (37%), Positives = 209/353 (59%), Gaps = 33/353 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R++GQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVIGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ ++ IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAETVFGDE-QSIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREQLMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ D  VE +   GY   +GAR +K +V + +
Sbjct: 791 LSKENIRSIVQIQLDRVVRTAAAQDITLVMGDALVEHLTEAGYQPEFGARELKRQVRQII 850

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKKKGMKDFID 605
            ++LA    K ++G     +L      EV  D A   +   K+ +   KD  D
Sbjct: 851 ETKLA----KEILGD----KLQSGDRVEVDYDKASDAVTFSKLARPDAKDAKD 895


>gi|221065571|ref|ZP_03541676.1| ATPase AAA-2 domain protein [Comamonas testosteroni KF-1]
 gi|220710594|gb|EED65962.1| ATPase AAA-2 domain protein [Comamonas testosteroni KF-1]
          Length = 951

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 31/317 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAEAIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
           R   +E  ++T +                     V  +L+ HF R EFL RI+EI+ F  
Sbjct: 777 RGAADEEYEKTKA--------------------EVMDVLRGHF-RPEFLNRIDEIIVFHS 815

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L   A+ A  +  + + +D   ++    +GY   +GAR +K    R 
Sbjct: 816 LGKEEIRHIVSLQLERVARNAASQ-GVTLTYDQTLIDHFAQEGYKPEFGARELK----RL 870

Query: 552 VVSQLAAAHEKSVIGKG 568
           + S+L  A  + ++G G
Sbjct: 871 IRSELETALAREMLGGG 887


>gi|87123506|ref|ZP_01079357.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
           ClpB [Synechococcus sp. RS9917]
 gi|86169226|gb|EAQ70482.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit
           ClpB [Synechococcus sp. RS9917]
          Length = 913

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 124/328 (37%), Positives = 200/328 (60%), Gaps = 22/328 (6%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           +QR    E ++   LE +L+ R++GQ  A+  +++AI+R   G  D   P+  FLFLG +
Sbjct: 590 VQRLLAGERQKLLELETQLQQRVIGQPEAVQAVASAIRRARAGMKDPRRPVGSFLFLGPT 649

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA  +  D++EA +RLDMSE+ E++ VA+L+GAPPGY+G+++GGQLT+ +
Sbjct: 650 GVGKTELAKALAARLF-DEEEALVRLDMSEFMERNAVARLLGAPPGYVGYEEGGQLTEAV 708

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P A++L DEV+KAHPDV  VLLQ+ D+GRLTD +G+T++ +  + VMTSNLAS  I 
Sbjct: 709 RRRPYALLLLDEVEKAHPDVFNVLLQVLDDGRLTDSQGRTVDFRHTVVVMTSNLASRAIL 768

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
             A    +EG++      ++ ++    +D  ++R F              R EFL RI+E
Sbjct: 769 DRA----REGQQPDADQAALDQALAVRVDEALARQF--------------RPEFLNRIDE 810

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIK 545
           ++ F P +  +L  +V  +L   A + + + ++ +  D  V   LA+ G++  YGAR ++
Sbjct: 811 VIRFRPLAIEDLERIVHLQLAELA-QLMREQDLELRVDPAVVRALAEQGFEPEYGARPLR 869

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRL 573
             + RQ+ + LA    +      S VR+
Sbjct: 870 RVLRRQLENPLATQLLEDRFSGASAVRV 897


>gi|115526330|ref|YP_783241.1| ATPase [Rhodopseudomonas palustris BisA53]
 gi|115520277|gb|ABJ08261.1| ATPase AAA-2 domain protein [Rhodopseudomonas palustris BisA53]
          Length = 879

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/348 (37%), Positives = 204/348 (58%), Gaps = 35/348 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVG 272
           AD    +N+G +  +     ++ Q++ ++     D  +  E E+ +   +E +L  R+VG
Sbjct: 516 ADIEAHENAGEMMEEAVTANHVAQVVSRWTGVPVD--KMLEGEKDKLLRMEDQLAQRVVG 573

Query: 273 QESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIR 331
           Q  A++ +S A++R   G  D + P+  F+FLG +G+GKTEL K LA Y+  D+  A +R
Sbjct: 574 QFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFNDET-AMVR 632

Query: 332 LDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLL 391
           LDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLL
Sbjct: 633 LDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLL 692

Query: 392 QLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQG 451
           Q+ D+GRLTDG+G+T++ ++ + VMTSNL S+ +         EGE+             
Sbjct: 693 QVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSDYLVNQP-----EGED------------- 734

Query: 452 SNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA- 510
                  +   +D +V   ++ HF R EFL R++EI+ F    K+E+  +V  E+ F   
Sbjct: 735 -------TEAVRD-LVMGTVRSHF-RPEFLNRVDEIILFHRLQKNEMGRIV--EIQFGRL 783

Query: 511 KKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +K L+   I +  D      LA+ G+D  YGAR +K  ++R V   LA
Sbjct: 784 QKLLEDRKIVLELDAPAREWLAEKGWDPAYGARPLKRVIQRFVQDPLA 831


>gi|417270712|ref|ZP_12058065.1| Clp amino terminal domain protein [Escherichia coli 2.4168]
 gi|386237055|gb|EII69027.1| Clp amino terminal domain protein [Escherichia coli 2.4168]
          Length = 949

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 27/317 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
           R   +E  ++T +                     V  +L+ HF R EFL RI+EI+ F  
Sbjct: 777 RGAADEEYEKTKA--------------------EVMDVLRGHF-RPEFLNRIDEIIVFHA 815

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQ 551
             K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  +
Sbjct: 816 LGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRSE 874

Query: 552 VVSQLAAAHEKSVIGKG 568
           + + LA       IGKG
Sbjct: 875 LETALAREMLGGGIGKG 891


>gi|407697521|ref|YP_006822309.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           dieselolei B5]
 gi|407254859|gb|AFT71966.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           dieselolei B5]
          Length = 861

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/321 (37%), Positives = 196/321 (61%), Gaps = 34/321 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ+ A+  +S A++R   G +D + P   FLFLG +G+GKT
Sbjct: 556 EGEREKLLRMEEALHHRVVGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 616 ELCKALAGFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  VLLQ+ ++GRLTDG+G+T++ ++ + VMTSNL S+ I + A  
Sbjct: 675 SVLLLDEVEKAHPDVFNVLLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRMA-- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              EG+  + +                        V  ++ +HF R EF+ R++E V F 
Sbjct: 733 --GEGDYEAMKA----------------------AVMEVVGQHF-RPEFINRVDETVVFH 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +++L  +   +L++  K+ +D+     + D  ++ ++  G+D  YGAR +K  ++ Q
Sbjct: 768 PLGQAQLKGIAGIQLDYLRKRLVDREMSLTLSDAALDKLVEAGFDPVYGARPLKRAIQSQ 827

Query: 552 VVSQLAAAHEKSVIGKGSFVR 572
           + + LA A     + KG FV+
Sbjct: 828 LENPLAQA-----LLKGEFVQ 843


>gi|160892139|ref|ZP_02073142.1| hypothetical protein BACUNI_04602 [Bacteroides uniformis ATCC 8492]
 gi|317480862|ref|ZP_07939943.1| ATP-dependent chaperone ClpB [Bacteroides sp. 4_1_36]
 gi|156858617|gb|EDO52048.1| ATP-dependent chaperone protein ClpB [Bacteroides uniformis ATCC
           8492]
 gi|316902947|gb|EFV24820.1| ATP-dependent chaperone ClpB [Bacteroides sp. 4_1_36]
          Length = 864

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/298 (40%), Positives = 182/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  +S A++R   G  D   P+  FLFLG++G+GKTELAK LA +
Sbjct: 560 LEAELHQRVIGQDEAIEAVSDAVRRSRAGLQDPKRPIGSFLFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSGYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K   SN +  +    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLNSSNKEQIVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTEPEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + + +V        LA+ GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-SVQKMLSGNGVELVLTNAAIDFLANAGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|300726792|ref|ZP_07060222.1| ATP-dependent chaperone ClpB [Prevotella bryantii B14]
 gi|299775905|gb|EFI72485.1| ATP-dependent chaperone ClpB [Prevotella bryantii B14]
          Length = 862

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 187/311 (60%), Gaps = 32/311 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           ++E  +   +E+ L  R++GQE AI  +S A++R   G  D   P+  F+F+G++G+GKT
Sbjct: 551 QSEREKLLHMEEELHKRVIGQEEAIRAVSDAVRRSRAGLQDPKRPIASFIFIGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D+     R+DMSEYQEK  V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALADYLFNDEN-MMTRIDMSEYQEKFSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ---- 427
           +V+LFDE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL SN I +    
Sbjct: 670 SVILFDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSNLIRERMEE 729

Query: 428 -HALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
            H +    E EE                         +H +  +LK+   R EFL RI++
Sbjct: 730 AHGVLSNNEQEEL------------------------NHQIMDMLKKTI-RPEFLNRIDD 764

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
            + FLP SK ++  +V  ++N  +K    +     + D  ++ +   G+D  +GAR +K 
Sbjct: 765 TIMFLPLSKPQIREVVRLQMNSVSKMLAQQGFQLQITDAAIDYLGDVGFDPEFGARPVKR 824

Query: 547 EVERQVVSQLA 557
            +++ V++ L+
Sbjct: 825 AIQQYVLNDLS 835


>gi|423303492|ref|ZP_17281491.1| chaperone ClpB [Bacteroides uniformis CL03T00C23]
 gi|423307785|ref|ZP_17285775.1| chaperone ClpB [Bacteroides uniformis CL03T12C37]
 gi|392687856|gb|EIY81147.1| chaperone ClpB [Bacteroides uniformis CL03T00C23]
 gi|392689654|gb|EIY82931.1| chaperone ClpB [Bacteroides uniformis CL03T12C37]
          Length = 864

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/298 (40%), Positives = 182/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  +S A++R   G  D   P+  FLFLG++G+GKTELAK LA +
Sbjct: 560 LEAELHQRVIGQDEAIEAVSDAVRRSRAGLQDPKRPIGSFLFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSGYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K   SN +  +    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLNSSNKEQIVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTEPEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + + +V        LA+ GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-SVQKMLSGNGVELVLTNAAIDFLANAGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|387128271|ref|YP_006296876.1| clpB protein [Methylophaga sp. JAM1]
 gi|386275333|gb|AFI85231.1| ClpB protein [Methylophaga sp. JAM1]
          Length = 861

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/325 (36%), Positives = 196/325 (60%), Gaps = 29/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +++ L +R++GQ+ A+N ++ AI+R   G +D + P   FLFLG +G+GKT
Sbjct: 553 EGERDKLLKMDEALHERVIGQDEAVNSVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKSLATFLF-DTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL SN I + A  
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSNVIQEMA-- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GE+                          + V  I+ +HF R EF+ R++++V F 
Sbjct: 730 ----GED--------------------KYDTMKNAVMEIVGQHF-RPEFINRVDDVVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  KS++H +   +L+   ++  +K     + D  ++ +   G+D  YGAR +K  ++ +
Sbjct: 765 PLQKSQIHAIADIQLSHLRQRLAEKEMGLELSDAALDMLSEAGFDPVYGARPLKRVIQHE 824

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + + LA A        G  +++ VQ
Sbjct: 825 LENPLAQALLSGRFVAGQVIKVDVQ 849


>gi|270296241|ref|ZP_06202441.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20]
 gi|270273645|gb|EFA19507.1| ATP-dependent chaperone ClpB [Bacteroides sp. D20]
          Length = 864

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/298 (40%), Positives = 182/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  +S A++R   G  D   P+  FLFLG++G+GKTELAK LA +
Sbjct: 560 LEAELHQRVIGQDEAIEAVSDAVRRSRAGLQDPKRPIGSFLFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSGYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K   SN +  +    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLNSSNKEQIVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTEPEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + + +V        LA+ GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-SVQKMLSGNGVELVLTNAAIDFLANAGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|255310914|ref|ZP_05353484.1| chaperone-protease ClpB [Chlamydia trachomatis 6276]
 gi|255317214|ref|ZP_05358460.1| chaperone-protease ClpB [Chlamydia trachomatis 6276s]
 gi|255348474|ref|ZP_05380481.1| chaperone-protease ClpB [Chlamydia trachomatis 70]
 gi|255503016|ref|ZP_05381406.1| chaperone-protease ClpB [Chlamydia trachomatis 70s]
 gi|255506688|ref|ZP_05382327.1| chaperone-protease ClpB [Chlamydia trachomatis D(s)2923]
 gi|385239624|ref|YP_005807466.1| chaperone-protease ClpB [Chlamydia trachomatis G/9768]
 gi|385241476|ref|YP_005809316.1| chaperone-protease ClpB [Chlamydia trachomatis E/11023]
 gi|385242400|ref|YP_005810239.1| chaperone-protease ClpB [Chlamydia trachomatis G/9301]
 gi|385245085|ref|YP_005813908.1| chaperone-protease ClpB [Chlamydia trachomatis E/150]
 gi|385246010|ref|YP_005814832.1| chaperone-protease ClpB [Chlamydia trachomatis G/11074]
 gi|386262468|ref|YP_005815747.1| chaperone-protease ClpB [Chlamydia trachomatis Sweden2]
 gi|389857809|ref|YP_006360051.1| chaperone-protease ClpB [Chlamydia trachomatis F/SW4]
 gi|389858682|ref|YP_006360923.1| chaperone-protease ClpB [Chlamydia trachomatis E/SW3]
 gi|389859559|ref|YP_006361799.1| chaperone-protease ClpB [Chlamydia trachomatis F/SW5]
 gi|289525156|emb|CBJ14629.1| chaperone-protease ClpB [Chlamydia trachomatis Sweden2]
 gi|296434701|gb|ADH16879.1| chaperone-protease ClpB [Chlamydia trachomatis E/150]
 gi|296435629|gb|ADH17803.1| chaperone-protease ClpB [Chlamydia trachomatis G/9768]
 gi|296437489|gb|ADH19650.1| chaperone-protease ClpB [Chlamydia trachomatis G/11074]
 gi|296438419|gb|ADH20572.1| chaperone-protease ClpB [Chlamydia trachomatis E/11023]
 gi|297139988|gb|ADH96746.1| chaperone-protease ClpB [Chlamydia trachomatis G/9301]
 gi|380248879|emb|CCE14167.1| chaperone-protease ClpB [Chlamydia trachomatis F/SW5]
 gi|380249756|emb|CCE13278.1| chaperone-protease ClpB [Chlamydia trachomatis F/SW4]
 gi|380250631|emb|CCE12389.1| chaperone-protease ClpB [Chlamydia trachomatis E/SW3]
 gi|440526809|emb|CCP52293.1| protein disaggregation chaperone [Chlamydia trachomatis D/SotonD1]
 gi|440529485|emb|CCP54969.1| protein disaggregation chaperone [Chlamydia trachomatis E/SotonE4]
 gi|440530378|emb|CCP55862.1| protein disaggregation chaperone [Chlamydia trachomatis E/SotonE8]
 gi|440531275|emb|CCP56785.1| protein disaggregation chaperone [Chlamydia trachomatis F/SotonF3]
 gi|440533059|emb|CCP58569.1| protein disaggregation chaperone [Chlamydia trachomatis
           Ia/SotonIa1]
 gi|440533953|emb|CCP59463.1| protein disaggregation chaperone [Chlamydia trachomatis
           Ia/SotonIa3]
 gi|440534849|emb|CCP60359.1| protein disaggregation chaperone [Chlamydia trachomatis E/Bour]
          Length = 867

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 194/307 (63%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALAELLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A IR DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FD+G LTD K + + CK+A+F+MTSN+ S E+A +  +                
Sbjct: 688 NILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQELADYCTK---------------- 731

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
             +G+ +D    +     VV P+LK +F   EF+ RI++I+ F+P +  ++  +V  ++N
Sbjct: 732 --KGTIVD----KEAVLSVVAPVLKNYF-SPEFINRIDDILPFVPLTTEDIVKIVGIQMN 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A + L++  I++ WD  +   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVALRLLER-KISLTWDDSLVLFLSEQGYDSAFGARPLKRLIQQKVVTMLSKALLKGDIK 843

Query: 567 KGSFVRL 573
            G  V L
Sbjct: 844 PGMAVEL 850


>gi|442314468|ref|YP_007355771.1| ATPases with chaperone activity, ATP-binding subunit [Riemerella
           anatipestifer RA-CH-2]
 gi|441483391|gb|AGC40077.1| ATPases with chaperone activity, ATP-binding subunit [Riemerella
           anatipestifer RA-CH-2]
          Length = 863

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 189/307 (61%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  ++ AI+R   G  D+  P+  FLFLG++G+GKT
Sbjct: 549 QSEREKLLHLEDELHKRVVGQEEAIEAVANAIRRNRAGLNDEKKPIGSFLFLGTTGVGKT 608

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D+     R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 609 ELAKALAEFLFDDENN-MTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 667

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV   LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S     H +Q
Sbjct: 668 SVVLLDEIEKAHPDVFNTLLQVLDDGRLTDNKGRVVNFKNTIVIMTSNLGS-----HIIQ 722

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              EG     +   +SK++                V  +LK+   R EF+ RI+E+V F 
Sbjct: 723 ENFEGLTEENQEEIVSKTK--------------EEVFGVLKQSL-RPEFINRIDEVVLFQ 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
           P +K E+  ++   L  +  K L+K NI +    D +  I   GYD  +GAR +K  +++
Sbjct: 768 PLNKKEIGKIIQYLLRGF-NKMLEKKNIVLTSTEDALNYIREKGYDPSFGARPLKRLLQQ 826

Query: 551 QVVSQLA 557
           +V++QL+
Sbjct: 827 EVLNQLS 833


>gi|326204691|ref|ZP_08194547.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325985258|gb|EGD46098.1| ATPase AAA-2 domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 780

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/334 (38%), Positives = 194/334 (58%), Gaps = 26/334 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
           +QR  E E  +   LE R+  R++GQE A+  ++ AI+R  +G+     P  F+F+G +G
Sbjct: 468 IQRLTEGEAEKLMSLETRIHKRVIGQEKAVEGVARAIRRSRSGFKKKKKPSSFIFVGPTG 527

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           +GKTEL + L+  +    +EA IRLDMSEY EKH V+KLIG+PPGY+G+DD GQLT++++
Sbjct: 528 VGKTELVRALSNELF-GSEEALIRLDMSEYMEKHTVSKLIGSPPGYVGYDDAGQLTEKVR 586

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           + P +V+L DE++KAHPDV  +LLQ+ ++GRLTD  GKT+  ++ I +MTSN  +N    
Sbjct: 587 RRPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSHGKTVNFENTIIIMTSNAGTN---- 642

Query: 428 HALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEI 487
               L+  G  FS  T +  +S+                V+ ++K  F R EFL RI+EI
Sbjct: 643 ----LKSGGIGFSNNTYTALESR----------------VRDVIKETF-RPEFLNRIDEI 681

Query: 488 VYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHE 547
           + F    K EL  ++   L     +A +K     V D   E IL  GYD  +GAR ++  
Sbjct: 682 IVFTELGKEELKKIIDLMLEEVYHEAREKDIRVNVSDKVKEFILEKGYDPKFGARPLRRT 741

Query: 548 VERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           V+  +  +L+  + K  I +GS V + +  + EV
Sbjct: 742 VQSYIEDRLSEEYLKGTIKEGSLVGVDLDDNNEV 775


>gi|421789946|ref|ZP_16226186.1| putative negative regulator of genetic competence ClpC/MecB
           [Acinetobacter baumannii Naval-82]
 gi|410396584|gb|EKP48850.1| putative negative regulator of genetic competence ClpC/MecB
           [Acinetobacter baumannii Naval-82]
          Length = 573

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 196/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 234 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 293

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 294 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYIGYDEGGQLTEKVRRKPYS 352

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 353 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 411

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K +                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 412 RDAAGEEYEK-----TKFE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 449

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 450 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 508

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 509 ELETTLAREMLGGGIGKG 526


>gi|423524922|ref|ZP_17501395.1| chaperone ClpB [Bacillus cereus HuA4-10]
 gi|401169148|gb|EJQ76395.1| chaperone ClpB [Bacillus cereus HuA4-10]
          Length = 866

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|376261774|ref|YP_005148494.1| chaperone ATPase [Clostridium sp. BNL1100]
 gi|373945768|gb|AEY66689.1| ATPase with chaperone activity, ATP-binding subunit [Clostridium
           sp. BNL1100]
          Length = 783

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/335 (37%), Positives = 194/335 (57%), Gaps = 26/335 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
           +QR  E E  +   LE R+  R++GQE A+  ++ AI+R  +G+     P  F+F+G +G
Sbjct: 471 IQRLTEGEAEKLISLETRIHQRVIGQEKAVEGVAKAIRRSRSGFKKKKKPSSFIFVGPTG 530

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           +GKTEL + L+  +    +EA IRLDMSEY EKH V+KLIG+PPGY+G+DD GQLT++++
Sbjct: 531 VGKTELVRALSTELF-GSEEALIRLDMSEYMEKHTVSKLIGSPPGYVGYDDAGQLTEKVR 589

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           + P +V+L DE++KAHPDV  +LLQ+ ++GRLTD  GKT+  ++ I +MTSN  +N    
Sbjct: 590 RRPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSHGKTVNFENTIIIMTSNAGTN---- 645

Query: 428 HALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEI 487
                +  G  FS  T +  +S+                V+ ++K  F R EFL RI+EI
Sbjct: 646 ----FKSGGIGFSNNTYTALESK----------------VRDVIKETF-RPEFLNRIDEI 684

Query: 488 VYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHE 547
           + F    K EL  ++   L    ++A +K     V D   E IL  GYD  +GAR ++  
Sbjct: 685 IVFTELGKEELKKIIDLMLEEVYQEAGEKDIRVNVSDKVKEFILEKGYDPKFGARPLRRT 744

Query: 548 VERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
           V+  +  +L+    K  I +GS V + +  + EV+
Sbjct: 745 VQNYIEDRLSEEFLKGTIKEGSLVGVDLDENNEVT 779


>gi|296275770|ref|ZP_06858277.1| ClpA-related protein [Staphylococcus aureus subsp. aureus MR1]
          Length = 567

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 237 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 296

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 297 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 355

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 356 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 414

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 415 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 456

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 457 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 515

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 516 RAIQKTIEDNLS 527


>gi|300088401|ref|YP_003758923.1| ATP-dependent chaperone ClpB [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528134|gb|ADJ26602.1| ATP-dependent chaperone ClpB [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 857

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/361 (36%), Positives = 205/361 (56%), Gaps = 32/361 (8%)

Query: 217 VKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESA 276
           V    G +  +  +D +I +++ ++      + R  E E ++   +E RL+ R+VGQ+ A
Sbjct: 521 VNGKEGQLLKEEVDDEDIAEVVARWT--GIPVSRLMEGEIQKLLQMENRLRLRLVGQDEA 578

Query: 277 INIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMS 335
           I  ++ +I+R   G  D + P+  F+FLG +G+GKTELAK LA ++  D+K A +RLDMS
Sbjct: 579 IKAVANSIRRARAGLQDPNRPVGSFIFLGPTGVGKTELAKALAEFMFDDEK-AMVRLDMS 637

Query: 336 EYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFD 395
           EY EKH V++L+GAPPGY+G+++GG LT+ +++ P +VVL DE++KAHPDV   LLQ+ D
Sbjct: 638 EYMEKHTVSRLVGAPPGYVGYEEGGHLTEAVRRRPYSVVLLDEIEKAHPDVFNTLLQILD 697

Query: 396 EGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD 455
           +GRLTDG+G+T++ K+ + +MTSN+ S  IA+                          L 
Sbjct: 698 DGRLTDGQGRTVDFKNTVIIMTSNIGSQWIAE--------------------------LG 731

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
                  KD V++  LK  FR  EFL R++EIV F   S   +  +V  +     K+   
Sbjct: 732 TGHEEEMKDKVLEA-LKTSFR-PEFLNRVDEIVIFHQLSWENIKRIVDIQFTGLKKRLAG 789

Query: 516 KHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           +H    + D   E +   G+D  YGAR +K  ++RQV+  LA A  +     G  +++ V
Sbjct: 790 RHLEVELTDEAREKLAEIGFDPAYGARPLKRAIQRQVLDPLAVAVLEGRFKDGEVIKVTV 849

Query: 576 Q 576
           +
Sbjct: 850 R 850


>gi|182418409|ref|ZP_02949703.1| ATP-dependent chaperone ClpB [Clostridium butyricum 5521]
 gi|237666871|ref|ZP_04526856.1| ATP-dependent chaperone ClpB [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182377791|gb|EDT75335.1| ATP-dependent chaperone ClpB [Clostridium butyricum 5521]
 gi|237658070|gb|EEP55625.1| ATP-dependent chaperone ClpB [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 871

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/395 (34%), Positives = 224/395 (56%), Gaps = 42/395 (10%)

Query: 184 NMTFLGFSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAE 243
           N  +   + + Y V+      +E  +K+    T ++  G +  +   +  + Q+L K+  
Sbjct: 495 NFDYNKVAEIQYSVIPK----IEEEIKAKEAFTKENYEGALLKEEVTEEEVSQVLAKWT- 549

Query: 244 KYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLF 302
               + R  E E  +   LE+ +  R++GQ  A+  ++ AI R   G  D + P+  F+F
Sbjct: 550 -GIPVSRLLEGEREKLLRLEEDMSKRVIGQGEAVETVTNAILRARAGLKDVNRPIGSFIF 608

Query: 303 LGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQL 362
           LG +G+GKTELAK LA  +  D +E  IR+DMSEY EKH V++L+GAPPGY+G+D+GGQL
Sbjct: 609 LGPTGVGKTELAKTLARNLF-DSEENIIRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQL 667

Query: 363 TKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLAS 422
           T+ +++ P +V+LFDE++KAH DV  + LQ+ D+GRLTD KGKT++ K+ I +MTSN+ S
Sbjct: 668 TEAVRRNPYSVILFDEIEKAHEDVFNIFLQILDDGRLTDNKGKTVDFKNTIIIMTSNIGS 727

Query: 423 NEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHV---VQPILKRHFRRDE 479
               ++ L+ + E                         H +D +   V  ILK  F + E
Sbjct: 728 ----EYLLENKNED------------------------HVEDEIKSKVMTILKSRF-KPE 758

Query: 480 FLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVH 538
           FL R+++I+ F P ++S +  ++   L   A++  DK+ I  V D + ET++A +GYD H
Sbjct: 759 FLNRVDDIIMFKPLTESGIKKIIDIFLKDVARRLKDKNIIIEVTD-EAETLMAREGYDPH 817

Query: 539 YGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
           YGAR +K  ++  + ++LA    K  +  GS V++
Sbjct: 818 YGARPLKRYIQNTLENRLARMIIKGELTYGSKVKI 852


>gi|167389730|ref|XP_001739061.1| chaperone protein ClpB [Entamoeba dispar SAW760]
 gi|165897378|gb|EDR24555.1| chaperone protein ClpB, putative [Entamoeba dispar SAW760]
          Length = 844

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 191/307 (62%), Gaps = 33/307 (10%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +++ L  R++GQ  A+  +S AI R   G  ++  P   F+FLG SG+GKTELAK LA  
Sbjct: 542 VKEELHKRVIGQNEAVTAVSDAIIRSRGGLGNEKRPTGSFMFLGPSGVGKTELAKALAVE 601

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D ++  +R+DMSEY E H V++LIGAPPGY+G+++GGQLT+ +++ P +V+LFDE++
Sbjct: 602 LF-DDEQNIVRIDMSEYMESHSVSRLIGAPPGYVGYEEGGQLTEAIRRKPYSVILFDEIE 660

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHP V  VLLQL DEGRLTDG+G+T++ K+ I +MTSNL S  I +    + +EG+   
Sbjct: 661 KAHPQVFNVLLQLLDEGRLTDGRGRTVDFKNTIVIMTSNLGSEIIMKG---VEREGQ--- 714

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                            +SR  K+ V++ I+K+ F + EFL R+++I+ F P S+ EL  
Sbjct: 715 -----------------VSRKVKETVME-IVKKTF-KPEFLNRLDDIIVFSPLSEKELKE 755

Query: 501 LVCRELNFWAKKALDKHNINIVWDID--VETILADGYDVHYGARSIKHEVERQVVSQLAA 558
           +V  ++    K    ++ ++ V   +  +E I+  GY + YGAR ++  +E+ VV+ +  
Sbjct: 756 IVKLQMGEVIKMIKKRYPLSEVEMTESAIEGIIKSGYSIAYGARPMRRYIEKTVVTSIT- 814

Query: 559 AHEKSVI 565
              KS+I
Sbjct: 815 ---KSII 818


>gi|443244951|ref|YP_007378176.1| ATP-dependent Clp protease [Nonlabens dokdonensis DSW-6]
 gi|442802350|gb|AGC78155.1| ATP-dependent Clp protease [Nonlabens dokdonensis DSW-6]
          Length = 869

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 190/307 (61%), Gaps = 25/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQ  AI  +S A++R   G  D + P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLKLEDELHHRVVGQSEAILAVSDAVRRSRAGLQDQNKPVGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D+  +  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLFNDEN-SMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K++I +MTSN+ + E+ Q   Q
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNSIIIMTSNMGA-ELIQERFQ 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                        S++ S    LD T     K  V+  + KR   R EF+ RI++IV F 
Sbjct: 729 ----------NAASVTDSL---LDET-----KKEVLISLKKRV--RPEFINRIDDIVMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
           P +++E+  +V  +L     K L K  I I        +LA  GYD  YGAR +K  ++R
Sbjct: 769 PLNENEIKEIVSLQLK-GVTKLLAKQGIVIDATEQAINLLAKKGYDPQYGARPVKRVIQR 827

Query: 551 QVVSQLA 557
           +++++L+
Sbjct: 828 EILNELS 834


>gi|227818348|ref|YP_002822319.1| ATPase AAA [Sinorhizobium fredii NGR234]
 gi|227337347|gb|ACP21566.1| carboxy-terminus of ATPase with conserved AAA-2 domain
           [Sinorhizobium fredii NGR234]
          Length = 595

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/309 (40%), Positives = 190/309 (61%), Gaps = 30/309 (9%)

Query: 255 EERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           E  R   +E++L +R++GQE AI  +S A++    G  +   P+  FLFLG +G+GKTEL
Sbjct: 252 ERERLVRMEEKLHERVIGQEEAIKAVSDAVRLARAGLREGRKPVATFLFLGPTGVGKTEL 311

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           AK LA  ++ D+ +A +RLDMSEY E+H VA+L+GAPPGY+G+++GGQLT+R+++ P  V
Sbjct: 312 AKALAEIVYGDE-DAMVRLDMSEYMERHTVARLVGAPPGYVGYEEGGQLTERVRRRPYTV 370

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           VL DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+LR
Sbjct: 371 VLLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRMVDFTNTIIIATSNLGSD-IIQRNLRLR 429

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
               E     P   K +                +  +L+ HF R EF+ RI+EI+ F   
Sbjct: 430 GSAAE----DPGKLKRE----------------LMEVLRGHF-RPEFINRIDEIIVFQSL 468

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEVER 550
           S+ E+  +V  +L    + A   H   I  +ID   ++ + ++GY   +GAR ++  +  
Sbjct: 469 SREEIKAIVELQLERVKRTA---HGQGIELEIDASLIDYLASEGYRPEFGARELRRLIRS 525

Query: 551 QVVSQLAAA 559
           ++ ++LA A
Sbjct: 526 ELETELARA 534


>gi|299132195|ref|ZP_07025390.1| ATP-dependent chaperone ClpB [Afipia sp. 1NLS2]
 gi|298592332|gb|EFI52532.1| ATP-dependent chaperone ClpB [Afipia sp. 1NLS2]
          Length = 877

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/342 (38%), Positives = 201/342 (58%), Gaps = 37/342 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E  L  R++GQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 552 EGEKDKLLRMEDMLGKRVIGQAQAVRAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA Y+  D + A +R+DMSEY EKH VA+LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 612 ELTKALAEYLF-DDETALVRMDMSEYMEKHSVARLIGAPPGYVGYDEGGALTEAVRRRPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSN+           
Sbjct: 671 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNI----------- 719

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G EF      +++ +G +     +   +D V+  +++ HF R EFL RI+EI+ F 
Sbjct: 720 ----GAEF-----LVNQPEGED-----TGAVRDQVMG-MVRTHF-RPEFLNRIDEIILFH 763

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              KSE+  +V  + N   +  L+   I++V D      LA+ G+D  YGAR +K  ++R
Sbjct: 764 RLQKSEMGKIVEIQFNRL-RGLLEDRKIDLVLDAKGRDWLAEKGWDPAYGARPLKRVIQR 822

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWS------KEVSEDSA 586
            V   LA       +  G+ V++    S      K V ED++
Sbjct: 823 SVQDPLAEMILAGDVRDGATVKISAGKSGLTFNGKAVGEDAS 864


>gi|254509456|ref|ZP_05121533.1| ATPase, AAA family [Vibrio parahaemolyticus 16]
 gi|219547618|gb|EED24666.1| ATPase, AAA family [Vibrio parahaemolyticus 16]
          Length = 655

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/308 (37%), Positives = 191/308 (62%), Gaps = 29/308 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E+ L  R++GQ  A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 351 EAEKEKLLQMEEVLHKRVIGQTEAVEVVSDAIRRSRAGLSDPNKPIGSFLFLGPTGVGKT 410

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 411 ELCKTLAHFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 469

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  I ++   
Sbjct: 470 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFGA 529

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  EG                          K+ V++ ++ +HF R EFL R++E V F 
Sbjct: 530 LDYEG-------------------------MKEQVME-VVSKHF-RPEFLNRVDESVVFH 562

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P ++  + ++   +L   + +  DK  +  V D  ++ I   G+D  +GAR +K  +++ 
Sbjct: 563 PLAQEHIKSIASIQLKRLSDRMEDKGYVLEVSDKALDLIAQVGFDPVFGARPLKRAIQQS 622

Query: 552 VVSQLAAA 559
           V + LA A
Sbjct: 623 VENPLAKA 630


>gi|428211800|ref|YP_007084944.1| ATP-dependent chaperone ClpB [Oscillatoria acuminata PCC 6304]
 gi|428000181|gb|AFY81024.1| ATP-dependent chaperone ClpB [Oscillatoria acuminata PCC 6304]
          Length = 874

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/320 (36%), Positives = 195/320 (60%), Gaps = 33/320 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E ++   LE  L  R++GQE A+  ++ AI+R   G +D + P+  F+FLG +G+GKT
Sbjct: 558 ESEMQKLLQLEDELHKRVIGQEEAVTAVADAIQRSRAGLSDPNRPVASFIFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +E+ +R+DMSEY EKH V++L+GAPPGY+G+++GGQL++ +++ P 
Sbjct: 618 ELAKALAAYLF-DTEESMVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLSEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  ++LQ+ D+GR+TD +G T++ K+++ +MTSN+ S    Q  L 
Sbjct: 677 SVILFDEIEKAHPDVFNIMLQILDDGRVTDAQGHTVDFKNSVIIMTSNVGS----QFILD 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  E EE+ +    + ++  SN                       R EFL RI+E++ F 
Sbjct: 733 VSGEDEEYEEMRGRVMEAMRSNF----------------------RPEFLNRIDEMIIFH 770

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              K +L  +V  ++    ++  D+     + D  V  +   GYD  YGAR +K  ++R+
Sbjct: 771 SLKKEQLRQIVQLQVERVIERLRDRKMSLKLSDSAVSFLAEVGYDPVYGARPLKRSIQRE 830

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           + +Q+A    KS++ +G F 
Sbjct: 831 LETQIA----KSIL-RGDFT 845


>gi|365093600|ref|ZP_09330664.1| ATPase AAA-2 domain-containing protein [Acidovorax sp. NO-1]
 gi|363414287|gb|EHL21438.1| ATPase AAA-2 domain-containing protein [Acidovorax sp. NO-1]
          Length = 936

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/318 (40%), Positives = 198/318 (62%), Gaps = 33/318 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 586 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 645

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  ++ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 646 LAKALAESVYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 704

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 705 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 763

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 764 RGAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 801

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K    R
Sbjct: 802 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLSFDQTLIDHFAEEGYKPEFGARELK----R 856

Query: 551 QVVSQLAAAHEKSVIGKG 568
            + S+L  A  + ++G G
Sbjct: 857 LIRSELETALAREMLGGG 874


>gi|389580929|ref|ZP_10170956.1| ATP-dependent chaperone ClpB [Desulfobacter postgatei 2ac9]
 gi|389402564|gb|EIM64786.1| ATP-dependent chaperone ClpB [Desulfobacter postgatei 2ac9]
          Length = 869

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/309 (38%), Positives = 189/309 (61%), Gaps = 31/309 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E+ +   +E  +  R++GQE+AI+ +S A++R  +G   +D P+  F+F+G +G+GKT
Sbjct: 554 QGEQEKLITMESHISKRVIGQENAIDAVSNAVRRARSGLQPEDRPIGTFIFMGPTGVGKT 613

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D ++A +RLDMSEY EKH VA+LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 614 ELAKALAEFMF-DSRDAMVRLDMSEYMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRRPY 672

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQ  D+GR+TDG G+T++ ++ I +MTSN+ S  +    L+
Sbjct: 673 SVILFDEIEKAHPDVFNILLQALDDGRMTDGHGRTVDFRNTIIIMTSNIGSRIL----LE 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             K G  FS+                      +  VQ  LK  F R EFL RI+EI+ F 
Sbjct: 729 AGKSG--FSEEV--------------------EQAVQQALKAAF-RPEFLNRIDEIITFH 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              +  L  +   ++    ++ L   N+ +  D D  T LA  GYD  +GAR +K  +++
Sbjct: 766 ALEREHLMDIAAIQIAALNRR-LAARNLAVYLDDDAMTFLAQKGYDPGFGARPLKRVIQQ 824

Query: 551 QVVSQLAAA 559
           ++ + L+ A
Sbjct: 825 EIENPLSMA 833


>gi|189467488|ref|ZP_03016273.1| hypothetical protein BACINT_03877 [Bacteroides intestinalis DSM
           17393]
 gi|189435752|gb|EDV04737.1| ATP-dependent chaperone protein ClpB [Bacteroides intestinalis DSM
           17393]
          Length = 862

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSAYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  G+N +  I    K+  V  +LK+   R EFL RI+E + FLP ++SE+  
Sbjct: 727 -----MEKLNGTNKEQVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTESEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ +  I+ +  +E +   GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-SVQKMLAQNGVELILTEGAIEFLTKVGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|427736204|ref|YP_007055748.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
 gi|427371245|gb|AFY55201.1| ATP-dependent chaperone ClpB [Rivularia sp. PCC 7116]
          Length = 872

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 205/341 (60%), Gaps = 35/341 (10%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +++ K+      + +  E+E+ +   LE  L +R+VGQ+ A+  I+ AI+R   G
Sbjct: 539 EADIAEVISKWT--GIPISKLVESEKEKLLQLEDELHNRVVGQDEAVTAIADAIQRSRAG 596

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  F+FLG +G+GKTEL K LA Y+  D +EA +R+DMSEY EKH V++L+GA
Sbjct: 597 LADPNRPIASFIFLGPTGVGKTELGKALASYMF-DTEEAMVRIDMSEYMEKHAVSRLVGA 655

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P AV+LFDE++KAHPDV  ++LQ+ D+GR+TD +G+T++ 
Sbjct: 656 PPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDF 715

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ I +MTSN+ S    Q  L +  +   + +    + ++  S+                
Sbjct: 716 KNTIIIMTSNIGS----QFILDVAGDDSGYEEMRTRVMEAMRSSF--------------- 756

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
                  R EFL RI+EI++F    KSEL  +V  ++     +  D+     + D  ++ 
Sbjct: 757 -------RPEFLNRIDEIIFFHALQKSELRKIVQLQVERLRHRLADRKMSLKLADAALDF 809

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSF 570
           +   GYD  +GAR +K  ++R++ +Q+A    KS++ +G F
Sbjct: 810 LAEVGYDPVFGARPLKRAIQRELETQIA----KSIL-RGEF 845


>gi|423666938|ref|ZP_17641967.1| chaperone ClpB [Bacillus cereus VDM034]
 gi|401304867|gb|EJS10414.1| chaperone ClpB [Bacillus cereus VDM034]
          Length = 866

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|374578233|ref|ZP_09651329.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM471]
 gi|374426554|gb|EHR06087.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM471]
          Length = 879

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/353 (37%), Positives = 205/353 (58%), Gaps = 35/353 (9%)

Query: 208 LLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLK 267
           L K  A+   K+NSG +  +     +I Q++ ++     D  +  E E+ +   +E  L 
Sbjct: 511 LEKQLAEIEAKENSGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLRMEDSLG 568

Query: 268 DRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKK 326
           +R+VGQ  A++ ++ A++R   G  D + P   F+FLG +G+GKTEL K LA Y+  D+ 
Sbjct: 569 NRVVGQAEAVHAVATAVRRSRAGLQDPNRPTGSFMFLGPTGVGKTELTKALAEYLFNDET 628

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
            A +RLDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV
Sbjct: 629 -AMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDV 687

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
             VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S      
Sbjct: 688 FNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQ-----PEGEDTSA----- 737

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
                           ++ V+  +++ HF R EFL R++EI+ F    +SE+  +V  E+
Sbjct: 738 ---------------VREQVMG-MVRSHF-RPEFLNRVDEIILFHRLQRSEMGRIV--EI 778

Query: 507 NFWA-KKALDKHNINIVWD-IDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
            F   +K L    I +  D    + + A G+D  YGAR +K  ++R V   LA
Sbjct: 779 QFARLQKLLTDRKIVLTLDAAGRDWLAAKGWDPAYGARPLKRVIQRHVQDPLA 831


>gi|365959159|ref|YP_004940726.1| ATPase [Flavobacterium columnare ATCC 49512]
 gi|365735840|gb|AEW84933.1| ATPase [Flavobacterium columnare ATCC 49512]
          Length = 869

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 184/307 (59%), Gaps = 25/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  IS A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 552 QSEREKLLKLEDELHKRVVGQEEAIQAISDAVRRSRAGLQDIKKPIGSFLFLGTTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 612 ELAKALAEYLF-DDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S  I      
Sbjct: 671 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNIGSQIIQ----- 725

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F     SI  +                 V  +LK+   R EF+ RI+EI+ F 
Sbjct: 726 -----EKFENLGGSIEAAT----------ELAKIEVLGLLKQTV-RPEFINRIDEIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P + + +  +V  +L     K L   NI +    +  T L++ G+D  +GAR +K  V+R
Sbjct: 770 PLTNANIKEIVALQLK-SVTKMLAHQNITMDATPEAITYLSEKGFDPEFGARPVKRVVQR 828

Query: 551 QVVSQLA 557
           +V++QL+
Sbjct: 829 EVLNQLS 835


>gi|375103238|ref|ZP_09749501.1| ATP-dependent chaperone ClpB [Saccharomonospora cyanea NA-134]
 gi|374663970|gb|EHR63848.1| ATP-dependent chaperone ClpB [Saccharomonospora cyanea NA-134]
          Length = 868

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 189/322 (58%), Gaps = 31/322 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L  R+VGQ  A+ ++S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 559 EGETGKLLRMEDELTKRVVGQPDAVQVVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 619 ELAKALAEFLFDDER-AILRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA     
Sbjct: 678 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIAD---- 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                       P++S +Q            KD V+  ++++HF + EFL R+++IV F 
Sbjct: 734 ------------PTLSDAQ-----------RKDSVMA-VVQQHF-KPEFLNRLDDIVVFG 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
                +L  +V  ++   A++   +     V     E +  +GYD  YGAR ++  V+  
Sbjct: 769 ALDTEQLAAIVDIQVGRLARRLSQRRLTLDVTPAAREWLAINGYDPIYGARPLRRLVQSA 828

Query: 552 VVSQLAAAHEKSVIGKGSFVRL 573
           +  +LA       I  G  VR+
Sbjct: 829 IGDRLAKKLLAGEIRDGDTVRV 850


>gi|419927010|ref|ZP_14444753.1| protein disaggregation chaperone [Escherichia coli 541-1]
 gi|388408436|gb|EIL68782.1| protein disaggregation chaperone [Escherichia coli 541-1]
          Length = 857

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 208/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++++S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDVVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|328951491|ref|YP_004368826.1| ATP-dependent chaperone ClpB [Marinithermus hydrothermalis DSM
           14884]
 gi|328451815|gb|AEB12716.1| ATP-dependent chaperone ClpB [Marinithermus hydrothermalis DSM
           14884]
          Length = 855

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 194/321 (60%), Gaps = 30/321 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE  L+ R+VGQ+ AI  ++ AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 544 EGEREKLVRLEDELRKRVVGQDEAIVAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKT 603

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +EA +R+DM+EY EKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 604 ELAKTLAATLF-DSEEAMVRIDMTEYMEKHAVARLIGAPPGYVGYEEGGQLTEVVRRKPY 662

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            V+LFDE++KAHPDV  +LLQ+ D+GRLTD  G+ ++ ++ + ++TSNL S  I +    
Sbjct: 663 TVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRVVDFRNTVIILTSNLGSPLILE---- 718

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             QGS+ +    R F+      +L+ HF R EFL R++EI+ F 
Sbjct: 719 ---------------GIQQGSSYEGIRERVFR------VLQEHF-RPEFLNRLDEIIVFR 756

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +K ++  +V  +L     + L +  + +    + +T LA+ GYD  +GAR ++  ++R
Sbjct: 757 PLTKEQIVRIVDLQLQRLQAR-LQEKRVTLELTPEAKTWLAERGYDPAFGARPLRRVIQR 815

Query: 551 QVVSQLAAAHEKSVIGKGSFV 571
           +V + LA    +  I +G+ V
Sbjct: 816 EVETPLARMILEGRIPEGARV 836


>gi|291287614|ref|YP_003504430.1| ATP-dependent chaperone ClpB [Denitrovibrio acetiphilus DSM 12809]
 gi|290884774|gb|ADD68474.1| ATP-dependent chaperone ClpB [Denitrovibrio acetiphilus DSM 12809]
          Length = 867

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 203/331 (61%), Gaps = 28/331 (8%)

Query: 224 IPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAA 283
           I  +  ++ +I  ++ K+    A    E+EA+  +   +E  L  R+VGQ++AI ++S +
Sbjct: 530 ILKEEVDEEDIATVISKWTGIPATRLLEEEAD--KLIRMEDYLHKRVVGQDNAIRVVSES 587

Query: 284 IKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHE 342
           ++R   G  D   P+  F+FLG +G+GKTELAK LA ++  D ++A +R+DMSEY EKH 
Sbjct: 588 VRRSRAGLNDPGKPIGSFIFLGPTGVGKTELAKSLAEFLF-DSEDAIVRIDMSEYMEKHS 646

Query: 343 VAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDG 402
           VA+LIGAPPGY+G+D+GGQLT+ +++ P +V+L DE++KAH DV  VLLQL D+GRLTD 
Sbjct: 647 VARLIGAPPGYVGYDEGGQLTEAVRRRPYSVILMDEIEKAHSDVFNVLLQLLDDGRLTDS 706

Query: 403 KGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHF 462
           KG+T+  K+ + +MTSN+AS+ I         E  ++ ++  SI K       + IS+  
Sbjct: 707 KGRTVSFKNCVIIMTSNIASDMIHDAF----AEDGDWEQKYSSIQK-------IAISQ-- 753

Query: 463 KDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIV 522
                   L  +F R EFL RI++IV F P +++ +  +    +  +AK+ L+ +NI + 
Sbjct: 754 --------LSGYF-RPEFLNRIDDIVVFHPLNETHITEIAEILMQVFAKRVLE-NNIELN 803

Query: 523 WDIDV-ETILADGYDVHYGARSIKHEVERQV 552
           W  +V   I+  G+D  YGAR +K  + R V
Sbjct: 804 WTKNVINEIVKAGFDAAYGARPMKRAIRRMV 834


>gi|339496256|ref|YP_004716549.1| ATPase [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
 gi|338803628|gb|AEJ07460.1| ATPase with chaperone activity, ATP-binding subunit [Pseudomonas
           stutzeri ATCC 17588 = LMG 11199]
          Length = 949

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/318 (40%), Positives = 197/318 (61%), Gaps = 29/318 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EF+ RI+EI+ F 
Sbjct: 777 RGAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFINRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARSAASQ-GVTLRFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKG 568
           ++ + LA       IGKG
Sbjct: 874 ELETALAREMLGGGIGKG 891


>gi|297564892|ref|YP_003683864.1| ATP-dependent chaperone ClpB [Meiothermus silvanus DSM 9946]
 gi|296849341|gb|ADH62356.1| ATP-dependent chaperone ClpB [Meiothermus silvanus DSM 9946]
          Length = 855

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 198/323 (61%), Gaps = 30/323 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE+ +  R+VGQ+ AI  ++ AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 544 EGEREKLLRLEEEMHKRVVGQDEAIVAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKT 603

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEYQEKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 604 ELAKTLAAQLF-DTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPY 662

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + ++TSNL S  I +    
Sbjct: 663 SVILFDEIEKAHPDVFNVLLQILDDGRLTDGQGRTVDFRNTVIILTSNLGSPLILEGI-- 720

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   +   +R F+      +L+++F R EFL R++EIV F 
Sbjct: 721 -----------------QAGLPYETIRNRVFE------VLQKNF-RPEFLNRLDEIVVFK 756

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ ++  +V  +L    ++ L +  I +    + +  LA+ GYD  +GAR +K  ++R
Sbjct: 757 PLTQEQIAQIVEIQLEGL-RRRLAERRITLELSPEAKRFLAERGYDPVFGARPLKRVIQR 815

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
           ++ + LA       +  G+++R+
Sbjct: 816 ELETPLAKKILAGEVQDGAYLRV 838


>gi|229132067|ref|ZP_04260930.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST196]
 gi|228651467|gb|EEL07439.1| Chaperone protein clpB 1 [Bacillus cereus BDRD-ST196]
          Length = 866

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|229166111|ref|ZP_04293872.1| Chaperone protein clpB 1 [Bacillus cereus AH621]
 gi|423594796|ref|ZP_17570827.1| chaperone ClpB [Bacillus cereus VD048]
 gi|228617333|gb|EEK74397.1| Chaperone protein clpB 1 [Bacillus cereus AH621]
 gi|401223748|gb|EJR30316.1| chaperone ClpB [Bacillus cereus VD048]
          Length = 866

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|163939070|ref|YP_001643954.1| ATPase [Bacillus weihenstephanensis KBAB4]
 gi|423515931|ref|ZP_17492412.1| chaperone ClpB [Bacillus cereus HuA2-4]
 gi|163861267|gb|ABY42326.1| ATPase AAA-2 domain protein [Bacillus weihenstephanensis KBAB4]
 gi|401166393|gb|EJQ73698.1| chaperone ClpB [Bacillus cereus HuA2-4]
          Length = 866

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|418619636|ref|ZP_13182459.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           hominis VCU122]
 gi|374824202|gb|EHR88173.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           hominis VCU122]
          Length = 823

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 191/312 (61%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L R  E E  R   LE+ L DR++GQ  A+  IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTRINETESDRLLNLEETLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   +++A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+ ++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGQDYETIRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N   K+ L + +INI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKDELKEIVTMMVNKLTKR-LSEQDINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 767 RAIQKTVEDNLS 778


>gi|167636130|ref|ZP_02394435.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0442]
 gi|170686647|ref|ZP_02877867.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0465]
 gi|254682659|ref|ZP_05146520.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. CNEVA-9066]
 gi|254740279|ref|ZP_05197971.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. Kruger B]
 gi|421637779|ref|ZP_16078376.1| Chaperone protein clpB [Bacillus anthracis str. BF1]
 gi|167528484|gb|EDR91249.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0442]
 gi|170669170|gb|EDT19913.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0465]
 gi|403395338|gb|EJY92577.1| Chaperone protein clpB [Bacillus anthracis str. BF1]
          Length = 866

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|297171552|gb|ADI22550.1| hypothetical protein [uncultured Oceanospirillales bacterium
           HF0500_09M11]
          Length = 861

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 202/330 (61%), Gaps = 29/330 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ+ A+  +S A++R   G +D + P   FLFLG +G+GKT
Sbjct: 556 EGERDKLLRMEEALHARVVGQDEAVTAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 616 ELCKALAGFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ ++GRLTDG+G+T++ ++ + VMTSNL S+ I + A  
Sbjct: 675 SVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRMA-- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +G+            +G+ ++V + +HF              R EF+ R++E V F 
Sbjct: 733 --GDGD--------YDAMKGAVMEV-VGQHF--------------RPEFINRVDETVVFH 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P ++ +L  +   +L++  ++ +++     + D  +E ++  G+D  YGAR +K  +++Q
Sbjct: 768 PLARGQLKGIAAIQLDYLRQRLVERDMGLRLSDKALEKLVEAGFDPVYGARPLKRAIQQQ 827

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           + + LA A  K   G G  + + V  S+ V
Sbjct: 828 LENPLAQALLKGEFGPGDTIEVDVAGSEMV 857


>gi|423677009|ref|ZP_17651948.1| chaperone ClpB [Bacillus cereus VDM062]
 gi|401306624|gb|EJS12090.1| chaperone ClpB [Bacillus cereus VDM062]
          Length = 866

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|86133406|ref|ZP_01051988.1| ATP-dependent Clp protease [Polaribacter sp. MED152]
 gi|85820269|gb|EAQ41416.1| ATP-dependent Clp protease [Polaribacter sp. MED152]
          Length = 868

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 197/307 (64%), Gaps = 25/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE +L  R+VGQE AI  IS A++R + G  + + P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLKLEDQLHKRVVGQEEAIVAISDAVRRSKAGLQNPNKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   VLLQ+ DEGRLTD KG+  + K+AI +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDTFNVLLQVLDEGRLTDNKGRVADFKNAIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+FS           ++LD  ++   K  V+  +LK+   R EFL RI++++ F 
Sbjct: 725 -----EKFS--------DPKADLD-AVTELAKIEVL-GLLKKSV-RPEFLNRIDDVIMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +K ++  +V  +++   KK + K  I +    +  T LA  G+   +GAR +K  +++
Sbjct: 769 PLNKVDIFEIVKLQID-QLKKMIGKQEITLDATDEAITYLAQKGFQPEFGARPVKRVIQK 827

Query: 551 QVVSQLA 557
           +V++QL+
Sbjct: 828 EVLNQLS 834


>gi|30261278|ref|NP_843655.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. Ames]
 gi|47526441|ref|YP_017790.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184110|ref|YP_027362.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Bacillus
           anthracis str. Sterne]
 gi|165873044|ref|ZP_02217664.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0488]
 gi|167641215|ref|ZP_02399469.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0193]
 gi|170709080|ref|ZP_02899509.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0389]
 gi|177654423|ref|ZP_02936320.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0174]
 gi|190566715|ref|ZP_03019632.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. Tsiankovskii-I]
 gi|228926310|ref|ZP_04089384.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229120795|ref|ZP_04250038.1| Chaperone protein clpB 1 [Bacillus cereus 95/8201]
 gi|229603919|ref|YP_002865699.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0248]
 gi|254725453|ref|ZP_05187235.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A1055]
 gi|254734078|ref|ZP_05191791.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. Western North America USA6153]
 gi|254753618|ref|ZP_05205654.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. Vollum]
 gi|254758715|ref|ZP_05210742.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. Australia 94]
 gi|386734981|ref|YP_006208162.1| Chaperone protein clpB [Bacillus anthracis str. H9401]
 gi|421509590|ref|ZP_15956494.1| Chaperone protein clpB [Bacillus anthracis str. UR-1]
 gi|54035820|sp|Q81TT4.1|CLPB_BACAN RecName: Full=Chaperone protein ClpB
 gi|30254892|gb|AAP25141.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. Ames]
 gi|47501589|gb|AAT30265.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178037|gb|AAT53413.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. Sterne]
 gi|164711199|gb|EDR16756.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0488]
 gi|167510856|gb|EDR86248.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0193]
 gi|170126035|gb|EDS94933.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0389]
 gi|172080707|gb|EDT65789.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0174]
 gi|190562267|gb|EDV16235.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. Tsiankovskii-I]
 gi|228662800|gb|EEL18397.1| Chaperone protein clpB 1 [Bacillus cereus 95/8201]
 gi|228833407|gb|EEM78970.1| Chaperone protein clpB 1 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229268327|gb|ACQ49964.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. A0248]
 gi|384384833|gb|AFH82494.1| Chaperone protein clpB [Bacillus anthracis str. H9401]
 gi|401820383|gb|EJT19549.1| Chaperone protein clpB [Bacillus anthracis str. UR-1]
          Length = 866

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|313206338|ref|YP_004045515.1| ATP-dependent chaperone clpb [Riemerella anatipestifer ATCC 11845 =
           DSM 15868]
 gi|383485642|ref|YP_005394554.1| ATP-dependent chaperone clpb [Riemerella anatipestifer ATCC 11845 =
           DSM 15868]
 gi|386321675|ref|YP_006017837.1| ATPase [Riemerella anatipestifer RA-GD]
 gi|416110551|ref|ZP_11592129.1| ClpB protein [Riemerella anatipestifer RA-YM]
 gi|312445654|gb|ADQ82009.1| ATP-dependent chaperone ClpB [Riemerella anatipestifer ATCC 11845 =
           DSM 15868]
 gi|315023204|gb|EFT36215.1| ClpB protein [Riemerella anatipestifer RA-YM]
 gi|325336218|gb|ADZ12492.1| ATPases with chaperone activity, ATP-binding subunit [Riemerella
           anatipestifer RA-GD]
 gi|380460327|gb|AFD56011.1| ATP-dependent chaperone clpb [Riemerella anatipestifer ATCC 11845 =
           DSM 15868]
          Length = 863

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 189/307 (61%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  ++ AI+R   G  D+  P+  FLFLG++G+GKT
Sbjct: 549 QSEREKLLHLEDELHKRVVGQEEAIEAVANAIRRNRAGLNDEKKPIGSFLFLGTTGVGKT 608

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D+     R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 609 ELAKALAEFLFDDENN-MTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 667

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV   LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S     H +Q
Sbjct: 668 SVVLLDEIEKAHPDVFNTLLQVLDDGRLTDNKGRVVNFKNTIVIMTSNLGS-----HIIQ 722

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              EG     +   +SK++                V  +LK+   R EF+ RI+E+V F 
Sbjct: 723 ENFEGLTEENQEEIVSKTK--------------EEVFGVLKQSL-RPEFINRIDEVVLFQ 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
           P +K E+  ++   L  +  K L+K NI +    D +  I   GYD  +GAR +K  +++
Sbjct: 768 PLNKKEIGKIIQYLLRGF-NKMLEKKNIILTSTEDALNYIREKGYDPSFGARPLKRLLQQ 826

Query: 551 QVVSQLA 557
           +V++QL+
Sbjct: 827 EVLNQLS 833


>gi|423509092|ref|ZP_17485623.1| chaperone ClpB [Bacillus cereus HuA2-1]
 gi|402457236|gb|EJV89005.1| chaperone ClpB [Bacillus cereus HuA2-1]
          Length = 866

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 191/306 (62%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +++E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTRNEIKGIVDKIVQELQGRLADRHISLELTESAKEFVVEAGFDPLYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|379794996|ref|YP_005324994.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus MSHR1132]
 gi|356871986|emb|CCE58325.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus MSHR1132]
          Length = 818

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/312 (38%), Positives = 188/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S  +     +  T+ +  K+            R EFL R+++
Sbjct: 666 --------QDQRFAGFGGSSDEQDYETIRKTMLKELKNSF----------RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NINI V D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIVVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|332160283|ref|YP_004296860.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664513|gb|ADZ41157.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 857

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 213/369 (57%), Gaps = 37/369 (10%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YG      ++ EL  +  A   ++  +  +  +   +A I ++L ++      + 
Sbjct: 498 MSELQYG------KIPELEKQLAAATALEGKTMKLLRNRVTEAEIAEVLARWT--GIPVS 549

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  E+E  +   +EQ L  R++GQ+ A+  +S AI+R   G +D + P+  FLFLG +G+
Sbjct: 550 RMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGV 609

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++
Sbjct: 610 GKTELCKALATFLF-DSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I   
Sbjct: 669 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ-- 726

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
                   E F +R+ S  K                 +V  ++ RHF R EF+ RI+E+V
Sbjct: 727 --------ERFGERSYSEMK----------------EMVMEVVTRHF-RPEFINRIDEVV 761

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F P  ++ L ++   +L    K+  ++     +    +E +   G+D  YGAR +K  +
Sbjct: 762 VFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETGFDPVYGARPLKRAI 821

Query: 549 ERQVVSQLA 557
           ++++ + LA
Sbjct: 822 QQEIENPLA 830


>gi|314937170|ref|ZP_07844517.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655789|gb|EFS19534.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           hominis subsp. hominis C80]
          Length = 823

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 191/312 (61%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L R  E E  R   LE+ L DR++GQ  A+  IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTRINETESDRLLNLEETLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   +++A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+ ++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGQDYETIRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N   K+ L + +INI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKDELKEIVTMMVNKLTKR-LSEQDINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 767 RAIQKTVEDNLS 778


>gi|429220788|ref|YP_007182432.1| ATP-dependent chaperone ClpB [Deinococcus peraridilitoris DSM
           19664]
 gi|429131651|gb|AFZ68666.1| ATP-dependent chaperone ClpB [Deinococcus peraridilitoris DSM
           19664]
          Length = 852

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/311 (38%), Positives = 188/311 (60%), Gaps = 28/311 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  E E  +   LEQ L  R++GQ  AI  ++ AI+R   G +D   P+  F+FLG +
Sbjct: 538 VSRLMEGEREKLLRLEQELHRRVIGQHRAIVSVADAIRRSRAGLSDPRRPIGSFMFLGPT 597

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA ++  D ++A +RLDMSEY EKH VA+LIGAPPGY+G+++GGQLT+ +
Sbjct: 598 GVGKTELAKALAAFLF-DTEDAMVRLDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAV 656

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+L DE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++++ +MTSN+ S    
Sbjct: 657 RRRPYSVILLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNSLVIMTSNIGS---- 712

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                            P I ++Q    D    R      V   L + F R EFL R+++
Sbjct: 713 -----------------PLILEAQARGDDAETIR----SAVMGALSQAF-RPEFLNRVDD 750

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           I+ F   + ++LH +V  +L    ++  ++     + D  V  + A GYD ++GAR +K 
Sbjct: 751 IIVFDALTSADLHQIVDIQLRGLRERLAERRVTLHLTDAAVNHLAAVGYDPNFGARPLKR 810

Query: 547 EVERQVVSQLA 557
            + R++ + LA
Sbjct: 811 AIGREIETPLA 821


>gi|228475267|ref|ZP_04059992.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
           hominis SK119]
 gi|228270732|gb|EEK12141.1| negative regulator of genetic competence ClpC/mecB [Staphylococcus
           hominis SK119]
          Length = 823

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 191/312 (61%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L R  E E  R   LE+ L DR++GQ  A+  IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTRINETESDRLLNLEETLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   +++A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+ ++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGQDYETIRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N   K+ L + +INI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKDELKEIVTMMVNKLTKR-LSEQDINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 767 RAIQKTVEDNLS 778


>gi|163788550|ref|ZP_02182995.1| hypothetical protein FBALC1_09952 [Flavobacteriales bacterium
           ALC-1]
 gi|159875787|gb|EDP69846.1| hypothetical protein FBALC1_09952 [Flavobacteriales bacterium
           ALC-1]
          Length = 868

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/309 (41%), Positives = 186/309 (60%), Gaps = 30/309 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  +S A++R   G  +   P+  FLFLG++G+GKT
Sbjct: 550 QSEREKLLKLEDELHKRVVGQEEAIEAVSDAVRRSRAGLQNPQKPIGTFLFLGTTGVGKT 609

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 610 ELAKALAEYLF-DDENAMTRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 668

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q
Sbjct: 669 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRIADFKNTIIIMTSNMGS-----HIIQ 723

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F       S  + + +DV             +LK+   R EFL RI++ + F 
Sbjct: 724 -----ERFEANKDIQSAIEAAKVDVL-----------GLLKQSV-RPEFLNRIDDTIMFT 766

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETI--LAD-GYDVHYGARSIKHEV 548
           P SK  +  +V  +L    K    +    I +D   E I  LA+ GY+  YGAR +K  +
Sbjct: 767 PLSKENIVDIVGLQLKSVTKMIAQQ---GITFDATEEAIAYLAEKGYNPEYGARPVKRVI 823

Query: 549 ERQVVSQLA 557
           +R+V++QL+
Sbjct: 824 QREVLNQLS 832


>gi|336405882|ref|ZP_08586549.1| chaperone ClpB [Bacteroides sp. 1_1_30]
 gi|335936349|gb|EGM98280.1| chaperone ClpB [Bacteroides sp. 1_1_30]
          Length = 862

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLHGSNKEEVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLNEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + +         L+  GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-GVQKMLAENGVELQLTEGALNFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|423721868|ref|ZP_17696044.1| chaperone ClpB [Parabacteroides merdae CL09T00C40]
 gi|409242881|gb|EKN35640.1| chaperone ClpB [Parabacteroides merdae CL09T00C40]
          Length = 862

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 193/307 (62%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AI+ I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKEKLLHLESELHTRVIGQEEAISAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F   TP   ++    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFENMTP---ETHDQVVDET-----KVQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVER 550
           P ++ E+  +V  +LN   KK L ++ I + + D  +  I   G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVTVQLN-SVKKMLAQNGIALEFTDAALAFISDKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLA 557
            V+++L+
Sbjct: 829 YVLNELS 835


>gi|358448455|ref|ZP_09158958.1| ATPase [Marinobacter manganoxydans MnI7-9]
 gi|357227243|gb|EHJ05705.1| ATPase [Marinobacter manganoxydans MnI7-9]
          Length = 858

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/326 (37%), Positives = 196/326 (60%), Gaps = 31/326 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ+ A+  +S A++R   G +D + P   FLFLG +G+GKT
Sbjct: 553 EGERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKALASFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ ++GRLTDG+G+T++ ++ + VMTSNL S+ I Q A  
Sbjct: 672 SVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQKA-- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GEE                    S     + V  ++  HF R EF+ R++E+V F 
Sbjct: 730 ----GEE--------------------SYEVMKNAVMEVVGTHF-RPEFINRVDEVVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++S++  +   ++   +K+ L + ++ +  D     +LA+ GYD  YGAR +K  ++R
Sbjct: 765 PLAESQIQGIARIQIESLSKR-LKEQDMKLELDDAAMELLAEVGYDPVYGARPLKRAIQR 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            + + LA    K     G  +R  V+
Sbjct: 824 MIENPLAQRLLKGEFVSGDVIRGTVK 849


>gi|227815982|ref|YP_002815991.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. CDC 684]
 gi|227005521|gb|ACP15264.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           anthracis str. CDC 684]
          Length = 866

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|126666667|ref|ZP_01737644.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
           sp. ELB17]
 gi|126628712|gb|EAZ99332.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
           sp. ELB17]
          Length = 328

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 194/326 (59%), Gaps = 31/326 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ  A+  ++ A++R   G +D   P   FLFLG +G+GKT
Sbjct: 23  EGERDKLMRMEEALHKRVIGQNEAVEAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKT 82

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D  +A +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 83  ELCKALASFLF-DTDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 141

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S  I +HA  
Sbjct: 142 SVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSGIIQRHA-- 199

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GEE              N D   +      +V   +  HF R EF+ R++E+V F 
Sbjct: 200 ----GEE--------------NYDAMKA------LVMDEVGTHF-RPEFINRVDEVVVFH 234

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P + +++  +   ++    K+ L + +I +  D    T+LA+ GYD  YGAR +K  ++R
Sbjct: 235 PLAANQIRGIAKVQIELLDKR-LQQQDIALELDESAMTLLANVGYDPVYGARPLKRAIQR 293

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            + + LA    +   G G  +R  V+
Sbjct: 294 MIENPLAQQLLQGSFGPGDTIRTRVE 319


>gi|379022435|ref|YP_005299096.1| clpB protein [Rickettsia canadensis str. CA410]
 gi|376323373|gb|AFB20614.1| clpB protein [Rickettsia canadensis str. CA410]
          Length = 858

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/385 (35%), Positives = 214/385 (55%), Gaps = 41/385 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YG++         ++K   +    DN G +  +   D++I  I+ +      D   
Sbjct: 500 SELKYGIIPE-------IMKKIQEAESMDNKGLL-KEIVSDSDIASIISRITGIPIDTML 551

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  R   +EQ+L++ ++GQ+ AI  +S A++R   G  D + PL  FLFLG +G+G
Sbjct: 552 SSERE--RLLVMEQKLRESVIGQDKAIKSVSDAVRRSRAGIQDINRPLGSFLFLGPTGVG 609

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL K LA ++  D + A +R+DMSEY EKH +++LIGAPPGY+G+D GG LT+ +++ 
Sbjct: 610 KTELTKALAAFLF-DDRNAILRVDMSEYMEKHTISRLIGAPPGYIGYDQGGILTEAVRRR 668

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  V+LFDEV+KAH D+  ++LQ+ DEGRLTD +G T++ K+ I V+TSNL +  +    
Sbjct: 669 PYQVILFDEVEKAHTDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQ- 727

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
               KEGE+  K                     KD V++ +  R   + EFL R++EI+ 
Sbjct: 728 ----KEGEDSDK--------------------VKDEVMEYV--RAVFKPEFLNRLDEIIL 761

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F   S++ +H +V  +L    KK L   NI + ++      LA+ GYD  +GAR +K  +
Sbjct: 762 FHRLSRNNIHDIVKIQLESL-KKILLAQNITLEFEESALNYLAEKGYDPSFGARPLKRLI 820

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL 573
           +R++ + LA       I  G  V++
Sbjct: 821 QREIQNNLAKLILAGAISSGKTVKI 845


>gi|311029392|ref|ZP_07707482.1| Class III stress response-related ATPase [Bacillus sp. m3-13]
          Length = 864

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/320 (39%), Positives = 198/320 (61%), Gaps = 36/320 (11%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE+ L +R+VGQE A+ ++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLKLEEILHERVVGQEEAVQLVSEAVIRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELARALAQSLF-DSEEQIIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHP+V  +LLQ+ D+GR+TD +GKT++ K+ + +MTSN+ S+ + +HA  
Sbjct: 678 SVILLDEVEKAHPEVFNILLQMLDDGRITDSQGKTVDFKNTVIIMTSNIGSHILLEHA-- 735

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GEE ++ T                   K+ V+   L+ HF R E L RI++ V F 
Sbjct: 736 ----GEELTEDT-------------------KEKVILQ-LRSHF-RPELLNRIDDTVIFS 770

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P SKSE+  +V + +    K+  DKH + +    + +  +AD  YD  +GAR +K  +++
Sbjct: 771 PLSKSEIGLIVEKLIKDLQKRLEDKH-LTLALSEEAKRFIADSAYDPVFGARPLKRFIQK 829

Query: 551 QVVSQLAAAHEKSVIGKGSF 570
            + + +A    K +I KGS 
Sbjct: 830 HIETLIA----KEII-KGSI 844


>gi|52144162|ref|YP_082667.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus E33L]
 gi|51977631|gb|AAU19181.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus E33L]
          Length = 866

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTEAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|383829701|ref|ZP_09984790.1| ATP-dependent chaperone ClpB [Saccharomonospora xinjiangensis
           XJ-54]
 gi|383462354|gb|EID54444.1| ATP-dependent chaperone ClpB [Saccharomonospora xinjiangensis
           XJ-54]
          Length = 868

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 191/322 (59%), Gaps = 31/322 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+ ++S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 559 EGETGKLLRMEEELAKRVVGQPDAVRVVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G++ GGQLT+ +++ P 
Sbjct: 619 ELAKALAEFLFDDER-AILRIDMSEYSEKHSVARLVGAPPGYVGYEQGGQLTESVRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA     
Sbjct: 678 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQIIAD---- 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                       P++S+ Q            KD V+  ++++HF + EFL R++++V F 
Sbjct: 734 ------------PALSEEQ-----------RKDSVMA-VVQKHF-KPEFLNRLDDVVVFG 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
                +L ++V  ++   A++   +     V     E +  +GYD  YGAR ++  V+  
Sbjct: 769 ALDTEQLTSIVDIQVGRLARRLSQRRLTLDVTPAAREWLALNGYDPIYGARPLRRLVQSA 828

Query: 552 VVSQLAAAHEKSVIGKGSFVRL 573
           +  QLA       I  G  VR+
Sbjct: 829 IGDQLAKKLLAGEIRDGDTVRV 850


>gi|262407259|ref|ZP_06083807.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_22]
 gi|294644668|ref|ZP_06722418.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CC 2a]
 gi|294809071|ref|ZP_06767793.1| ATP-dependent chaperone protein ClpB [Bacteroides xylanisolvens SD
           CC 1b]
 gi|298482679|ref|ZP_07000863.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. D22]
 gi|345509693|ref|ZP_08789285.1| chaperone ClpB [Bacteroides sp. D1]
 gi|423212615|ref|ZP_17199144.1| chaperone ClpB [Bacteroides xylanisolvens CL03T12C04]
 gi|229446455|gb|EEO52246.1| chaperone ClpB [Bacteroides sp. D1]
 gi|262354067|gb|EEZ03159.1| ATP-dependent chaperone ClpB [Bacteroides sp. 2_1_22]
 gi|292640002|gb|EFF58270.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CC 2a]
 gi|294443796|gb|EFG12541.1| ATP-dependent chaperone protein ClpB [Bacteroides xylanisolvens SD
           CC 1b]
 gi|295087149|emb|CBK68672.1| ATP-dependent chaperone ClpB [Bacteroides xylanisolvens XB1A]
 gi|298271142|gb|EFI12719.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. D22]
 gi|392694473|gb|EIY87700.1| chaperone ClpB [Bacteroides xylanisolvens CL03T12C04]
          Length = 862

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLHGSNKEEVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLNEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + +         L+  GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-GVQKMLAENGVELQLTEGALNFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|229090214|ref|ZP_04221462.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-42]
 gi|228693150|gb|EEL46863.1| Chaperone protein clpB 1 [Bacillus cereus Rock3-42]
          Length = 866

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTEAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|343492233|ref|ZP_08730606.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
 gi|342827573|gb|EGU61961.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
          Length = 858

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 200/330 (60%), Gaps = 31/330 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L K  +    + +  EAE+ +   +E+ L  R++GQ+ A+ ++S AI+R   G
Sbjct: 533 DAEIAEVLSK--QTGIPVSKMLEAEKEKLLRMEEVLHKRVIGQQEAVEVVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D ++A +R+DMSE+ EKH VA+L+GA
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLASFMF-DSEDAMVRIDMSEFMEKHSVARLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I ++   L  +G                          K+ V++ 
Sbjct: 710 RNTVVIMTSNLGSSRIQENFATLDYDG-------------------------MKEEVME- 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ +HF R EFL R++E V F P  K  + ++   +L     +  +K     V +  ++ 
Sbjct: 744 VVSKHF-RPEFLNRVDESVVFHPLGKEHIKSIASIQLTRLGNRMAEKGYELEVSEKALDL 802

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAA 559
           I   G+D  YGAR +K  +++ V + LA A
Sbjct: 803 ISEVGFDPVYGARPLKRAIQQSVENPLAKA 832


>gi|223939247|ref|ZP_03631128.1| ATP-dependent chaperone ClpB [bacterium Ellin514]
 gi|223892079|gb|EEF58559.1| ATP-dependent chaperone ClpB [bacterium Ellin514]
          Length = 869

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/329 (36%), Positives = 203/329 (61%), Gaps = 28/329 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           + +I Q++  +   +  + R  E E ++   +E+RL+ R++GQ  AI  ++ A++R  +G
Sbjct: 538 EEDIAQVVASWT--HIPVSRMLEGERQKLVKMEERLQKRVIGQSEAIAAVANAVRRSRSG 595

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  F+FLG +G+GKTELA+ LA ++  D + A +R+DMSEY EKH VA+L+GA
Sbjct: 596 LQDPNRPIGSFIFLGPTGVGKTELARALAEFLF-DDENAMVRIDMSEYMEKHAVARLVGA 654

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQL++ +++ P +VVLFDE++KAH DV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 655 PPGYVGYEEGGQLSEAVRRRPYSVVLFDEIEKAHHDVFNILLQVLDDGRLTDGQGRTVDF 714

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ I +MTSN+ S                     P I +  GS           + +V+ 
Sbjct: 715 KNTIIIMTSNIGS---------------------PIIQEFYGSGKMSAKGHAEMEQLVRM 753

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
            LK HF R EFL R+++++ F   ++ +L  +V  +LN   K+ L++H + +  D   + 
Sbjct: 754 ELKAHF-RPEFLNRVDDVIIFHSLNEEQLSHIVDIQLNRLGKR-LEQHKLQLDVDKSAKQ 811

Query: 530 ILA-DGYDVHYGARSIKHEVERQVVSQLA 557
           ++A +GYD  +GAR +K  ++  ++  LA
Sbjct: 812 LIAKEGYDPLFGARPLKRTIQELLLDPLA 840


>gi|433610053|ref|YP_007042422.1| Chaperone protein ClpB [Saccharothrix espanaensis DSM 44229]
 gi|407887906|emb|CCH35549.1| Chaperone protein ClpB [Saccharothrix espanaensis DSM 44229]
          Length = 860

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/325 (39%), Positives = 192/325 (59%), Gaps = 33/325 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L  R+VGQ  A+ ++S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 555 EGETTKLLRMEDELGRRVVGQAEAVRVVSDAVRRTRAGVADPDRPTGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A IR+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 615 ELAKALAEFLFDDER-AMIRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA     
Sbjct: 674 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQVIAD---- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                               +NLD    R   D V+  +++ HF + EFL R++++V F 
Sbjct: 730 --------------------ANLD---ERQRTDAVMA-VVRTHF-KPEFLNRLDDVVVFR 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
             +  EL ++V  +++  A++ L +  + +         LA +G+D  YGAR ++  ++ 
Sbjct: 765 SLATEELTSIVDIQVDRLARR-LGQRRLTLEVTPSARDWLAINGFDPVYGARPLRRLIQS 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
            +  QLA       +  G  VR+ V
Sbjct: 824 SIGDQLAKELLAGEVRDGDAVRVDV 848


>gi|311033365|sp|Q7WSY8.2|CLPB_PROFC RecName: Full=Chaperone protein ClpB
          Length = 866

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/309 (40%), Positives = 187/309 (60%), Gaps = 33/309 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E R+  R+VGQ++A+  +S A++R   G +D + P   F+FLG +G+GKT
Sbjct: 556 EGESEKLLDMENRIGKRLVGQQAAVKAVSDAVRRSRAGISDPNRPTGSFMFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D + A +R+DMSEY EKH V++L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 616 ELAKALADFLF-DDETAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRRPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ I +MTSNL S  +A     
Sbjct: 675 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNVILIMTSNLGSQFMAD---- 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                       PS+S  +  N             V  ++K HF R EFL R++EIV F 
Sbjct: 731 ------------PSMSPEERRNQ------------VMAVVKDHF-RPEFLNRLDEIVLFD 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
             S+ +L  +V   L+   ++ L +  I+I         LA  GYD  YGAR ++  ++ 
Sbjct: 766 ELSREDLDKIVDISLDKLNRR-LAERRISIDVSAAAREWLARTGYDPVYGARPLRRLIQT 824

Query: 551 QVVSQLAAA 559
            V  QLA A
Sbjct: 825 TVEDQLARA 833


>gi|405984332|ref|ZP_11042635.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
 gi|404388164|gb|EJZ83248.1| ATP-dependent chaperone ClpB [Slackia piriformis YIT 12062]
          Length = 906

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/303 (40%), Positives = 190/303 (62%), Gaps = 21/303 (6%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE +L +R+VGQ+ A++ +++AI+R   G +D D P+  FLFLG +G+GKTELAK LA Y
Sbjct: 567 LEVKLHERVVGQDEAVSAVASAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTELAKALAEY 626

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D++ A +R+DMSEY EK  V +LIGAPPGY+G+D+GGQLT+ +++ P +V+L DE++
Sbjct: 627 LFDDER-AMVRIDMSEYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRRPYSVILLDEME 685

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAH DV  +LLQ+ D+GRLTDG+G+ +  K+ I +MTSN+ S  I            EFS
Sbjct: 686 KAHQDVFNILLQVLDDGRLTDGQGRVVSFKNTIIIMTSNVGSQAI-----------REFS 734

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHV-----VQPILKRHFRRDEFLGRINEIVYFLPFSK 495
           ++  S+       +   ++   K        V   L+  F R EFL RI++++ F   + 
Sbjct: 735 RQKESMGSMVEDMMQGDMAAMAKKIAELQTQVDEALRNTF-RPEFLNRIDDVITFNALTS 793

Query: 496 SELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVS 554
           +E+  +V  +L    ++ L +  I++ V    VE +  DGYD  YGAR +K  V+R+VV 
Sbjct: 794 AEIEPIVNLQL-AKVRERLAERRIDLEVKPAAVEQLAIDGYDPVYGARPLKRLVQREVVD 852

Query: 555 QLA 557
           ++A
Sbjct: 853 RVA 855


>gi|334125226|ref|ZP_08499217.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
 gi|333387301|gb|EGK58501.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
          Length = 861

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/345 (36%), Positives = 208/345 (60%), Gaps = 33/345 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A+  +S AI+R   G
Sbjct: 537 DAEIAEVLARWT--GIPVARMMESEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 595 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMVRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD +   H KD V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYS---HMKDLVL-G 747

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           ++ ++F R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 748 VVSQNF-RPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKR-LEERGYEIHISDDALK 805

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
            + A+GYD  YGAR +K  +++Q+ + LA       +  G  +RL
Sbjct: 806 LLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 850


>gi|253315634|ref|ZP_04838847.1| endopeptidase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
          Length = 818

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 190/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LFEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|418954707|ref|ZP_13506663.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-189]
 gi|375372472|gb|EHS76212.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           aureus subsp. aureus IS-189]
          Length = 818

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 189/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YG R + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGTRPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|375098187|ref|ZP_09744452.1| ATP-dependent chaperone ClpB [Saccharomonospora marina XMU15]
 gi|374658920|gb|EHR53753.1| ATP-dependent chaperone ClpB [Saccharomonospora marina XMU15]
          Length = 869

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/308 (40%), Positives = 181/308 (58%), Gaps = 35/308 (11%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+ ++S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 560 EGETGKLLRMEEELTKRVVGQADAVQVVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKT 619

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 620 ELAKGLAEFLFDDER-AMLRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 678

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL- 430
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA  AL 
Sbjct: 679 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIADPALD 738

Query: 431 -QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
            Q RKE                               V  ++++HF + EFL R+++IV 
Sbjct: 739 EQQRKE------------------------------AVMAVVQQHF-KPEFLNRLDDIVV 767

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVE 549
           F      +L  +V  ++    ++   +     V     E +  +GYD  YGAR ++  V+
Sbjct: 768 FHALGTEQLGQIVNIQVRRLGQRLAQRRLTLDVTPAAQEWLALNGYDPIYGARPLRRLVQ 827

Query: 550 RQVVSQLA 557
             +  QLA
Sbjct: 828 SAIGDQLA 835


>gi|196036224|ref|ZP_03103623.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus W]
 gi|195991199|gb|EDX55168.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           cereus W]
          Length = 866

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLHLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVKLTEAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|49481701|ref|YP_035409.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|49333257|gb|AAT63903.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 866

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQVRLADRHITVQLTEAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|402848341|ref|ZP_10896604.1| ClpB protein [Rhodovulum sp. PH10]
 gi|402501346|gb|EJW12995.1| ClpB protein [Rhodovulum sp. PH10]
          Length = 869

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/351 (37%), Positives = 206/351 (58%), Gaps = 37/351 (10%)

Query: 213 ADPTVKDNSGHIPSDYAEDA----NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKD 268
           A+    ++ GH      E+A    ++ Q++ ++     D   E E E+  K  +E+ L  
Sbjct: 516 AESEAAEHKGHQGGAMVEEAVTADHVAQVVSRWTGVPVDKMLEGEKEKLLK--MEEGLAR 573

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  D ++
Sbjct: 574 RVVGQAEAVRAVSTAVRRARAGLQDPNRPIGSFMFLGPTGVGKTELTKALAEFLF-DDEQ 632

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P  V+LFDE++KAHPDV 
Sbjct: 633 AMVRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAIRRRPYQVILFDEIEKAHPDVF 692

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  + + A     EGE+       + 
Sbjct: 693 NVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSQVLMEQA-----EGED-----SDLV 742

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
           K+Q                V  +++  F R EFL R++EI+ F    + ++  +V  +L 
Sbjct: 743 KAQ----------------VMAVVRSAF-RPEFLNRVDEIILFHRLEREQMGRIVEIQLG 785

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
              +K LD+  I +  D   +  LAD G+D  YGAR +K  +++ V   LA
Sbjct: 786 RL-QKLLDERKIALSLDARAKEWLADKGFDPTYGARPLKRAIQKAVQDPLA 835


>gi|149377764|ref|ZP_01895497.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
           algicola DG893]
 gi|149357936|gb|EDM46425.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
           algicola DG893]
          Length = 858

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 192/307 (62%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ+ A+  +S A++R   G +D   P   FLFLG +G+GKT
Sbjct: 553 EGERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPHRPNGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKALASFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ ++GRLTDG+G+T++ ++ + VMTSNL S+ I Q A  
Sbjct: 672 SVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQKA-- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GEE         ++  S++   +  HF              R EF+ R++E+V F 
Sbjct: 730 ----GEEN-------YEAMKSDVMAVVGTHF--------------RPEFINRVDEVVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++S++  +   +++   K+ L + ++++V D     +LA+ GYD  YGAR +K  ++R
Sbjct: 765 PLAESQIQGIARIQVDALGKR-LKEQDMSLVLDDAAMELLAEVGYDPVYGARPLKRAIQR 823

Query: 551 QVVSQLA 557
            + + LA
Sbjct: 824 MIENPLA 830


>gi|295690764|ref|YP_003594457.1| ATP-dependent chaperone Clpb [Caulobacter segnis ATCC 21756]
 gi|295432667|gb|ADG11839.1| ATP-dependent chaperone ClpB [Caulobacter segnis ATCC 21756]
          Length = 859

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 184/307 (59%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E +L+ R+VGQ+ A+  +S A++R   G  D   P+  FLFLG +G+GKT
Sbjct: 551 EGERDKLLKMEDQLRGRVVGQDEALEAVSDAVRRARAGLQDPSKPIGSFLFLGPTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D+  A  R+DMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 611 ELTKSLAEFLFADEA-AITRMDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL +  +A     
Sbjct: 670 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLANQ--- 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             +EGE+     P +          T+  HF              R EFL RI+EI+ F 
Sbjct: 727 --EEGEDVEAVRPMVMN--------TVRGHF--------------RPEFLNRIDEIILFK 762

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             S+  +  +V  +L    +K L    +++  D +    LAD GYD  YGAR +K  +++
Sbjct: 763 RLSRHNMGDIVRIQLQ-RVEKLLADRRMSLALDAEALNWLADKGYDPVYGARPLKRVIQK 821

Query: 551 QVVSQLA 557
           ++V  +A
Sbjct: 822 ELVDPIA 828


>gi|157803222|ref|YP_001491771.1| clpB protein [Rickettsia canadensis str. McKiel]
 gi|157784485|gb|ABV72986.1| clpB protein [Rickettsia canadensis str. McKiel]
          Length = 858

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/385 (35%), Positives = 214/385 (55%), Gaps = 41/385 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YG++         ++K   +    D+ G +  +   D++I  I+ +      D   
Sbjct: 500 SELKYGIIPE-------IMKKIQEAESMDHKGLL-KEIVSDSDIASIISRITGIPIDTML 551

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  R   +EQ+L++ ++GQ+ AI  +S A++R   G  D + PL  FLFLG +G+G
Sbjct: 552 SSERE--RLLVMEQKLRESVIGQDKAIKSVSDAVRRSRAGIQDINRPLGSFLFLGPTGVG 609

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL K LA ++  D + A +R+DMSEY EKH +++LIGAPPGY+G+D GG LT+ +++ 
Sbjct: 610 KTELTKALAAFLF-DDRNAILRVDMSEYMEKHTISRLIGAPPGYIGYDQGGVLTEAVRRR 668

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  V+LFDEV+KAH D+  ++LQ+ DEGRLTD +G T++ K+ I V+TSNL +  +    
Sbjct: 669 PYQVILFDEVEKAHTDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQ- 727

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
               KEGE+  K                     KD V++ +  R   + EFL R++EI+ 
Sbjct: 728 ----KEGEDSDK--------------------VKDEVMEYV--RAVFKPEFLNRLDEIIL 761

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F   S++ +H +V  +L    KK L   NI + +D      LA+ GYD  +GAR +K  +
Sbjct: 762 FHRLSRNNIHDIVKIQLESL-KKILLAQNITLEFDESALNYLAEKGYDPSFGARPLKRLI 820

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL 573
           +R++ + LA       I  G  V++
Sbjct: 821 QREIQNNLAKLILAGAISSGKTVKI 845


>gi|323359340|ref|YP_004225736.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
           testaceum StLB037]
 gi|323275711|dbj|BAJ75856.1| ATPase with chaperone activity, ATP-binding subunit [Microbacterium
           testaceum StLB037]
          Length = 839

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/305 (39%), Positives = 189/305 (61%), Gaps = 24/305 (7%)

Query: 255 EERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           E  R   LE  L  R++GQ+ A+  ++ A++R   G  D++ P+  FLFLG +G+GKTEL
Sbjct: 523 ERGRLSQLEDELHARVIGQDDAVTAVAKAVRRNRTGMGDENRPVGSFLFLGPTGVGKTEL 582

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           AK LA  +  D   A IR DMSE+ E+H V++L+GAPPGY+G+D+ GQLT+R+++ P AV
Sbjct: 583 AKALAGSLF-DDDGAVIRFDMSEFGERHTVSRLVGAPPGYVGYDEAGQLTERVRRNPYAV 641

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           VLFDE++KAHPDV T+LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL +           
Sbjct: 642 VLFDEIEKAHPDVFTLLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGA----------- 690

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
              E  + R+ +I  + G+      +   ++ V+  +  R   R EFL RI++IV F   
Sbjct: 691 ---EILASRSGAIGFTTGA----FAAEDVRERVLGKL--REAMRPEFLNRIDDIVLFQKL 741

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQV 552
            K++L  +V R L   + + L   N+ + V +  V+ +   GY+  YGAR ++  ++R+V
Sbjct: 742 EKAQLREIV-RLLLGASSRRLSARNVTLDVTEAAVDRLAEVGYEPEYGARPLRRVIQREV 800

Query: 553 VSQLA 557
             ++A
Sbjct: 801 DDRIA 805


>gi|297627074|ref|YP_003688837.1| ATP-dependent Clp protease B1 [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922839|emb|CBL57417.1| Chaperone clpB 1 (ATP-dependent Clp protease B1) (Clp chaperone)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 858

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/309 (40%), Positives = 188/309 (60%), Gaps = 33/309 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E R+  R+VGQ++A+  +S A++R   G +D + P   F+FLG +G+GKT
Sbjct: 548 EGESEKLLDMENRIGKRLVGQQAAVKAVSDAVRRSRAGISDPNRPTGSFMFLGPTGVGKT 607

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D + A +R+DMSEY EKH V++L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 608 ELAKALADFLF-DDETAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRRPY 666

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ I +MTSNL S  +A     
Sbjct: 667 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNVILIMTSNLGSQFMAD---- 722

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                       PS+S  +  N             V  ++K HF R EFL R++EIV F 
Sbjct: 723 ------------PSMSPEERRNQ------------VMAVVKDHF-RPEFLNRLDEIVLFD 757

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
             S+ +L  +V   L+   ++ L +  I+I V     E +   GYD  YGAR ++  ++ 
Sbjct: 758 ELSREDLDKIVDISLDKLNRR-LAERRISIDVSAAAREWLARTGYDPVYGARPLRRLIQT 816

Query: 551 QVVSQLAAA 559
            V  QLA A
Sbjct: 817 TVEDQLARA 825


>gi|256820686|ref|YP_003141965.1| ATP-dependent chaperone ClpB [Capnocytophaga ochracea DSM 7271]
 gi|315223810|ref|ZP_07865659.1| chaperone protein ClpB [Capnocytophaga ochracea F0287]
 gi|420159488|ref|ZP_14666289.1| ATP-dependent chaperone protein ClpB [Capnocytophaga ochracea str.
           Holt 25]
 gi|429747490|ref|ZP_19280755.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           380 str. F0488]
 gi|256582269|gb|ACU93404.1| ATP-dependent chaperone ClpB [Capnocytophaga ochracea DSM 7271]
 gi|314946256|gb|EFS98256.1| chaperone protein ClpB [Capnocytophaga ochracea F0287]
 gi|394762138|gb|EJF44428.1| ATP-dependent chaperone protein ClpB [Capnocytophaga ochracea str.
           Holt 25]
 gi|429163000|gb|EKY05262.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           380 str. F0488]
          Length = 868

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 23/306 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE+ L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLNLEKELHRRVVGQEEAIEAVSDAIRRSRAGLQDPRRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K      ++    +D +     +D V+Q  L +   R EFL RI++I+ F 
Sbjct: 725 -----ETFEKYPKDTERA----IDES-----RDEVLQ--LLKQTVRPEFLNRIDDIIMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  ++ ++V  +L    +    +  +    D  ++ +   G+D  +GAR +K  ++++
Sbjct: 769 PLNAKDIRSIVRLQLQSVFRMVAKEGILLDATDEAIDYLAQKGFDPQFGARPVKRIIQKE 828

Query: 552 VVSQLA 557
           V+++L+
Sbjct: 829 VLNKLS 834


>gi|393778898|ref|ZP_10367158.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           412 str. F0487]
 gi|392611221|gb|EIW93964.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           412 str. F0487]
          Length = 868

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 23/306 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE+ L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLNLEKELHRRVVGQEEAIEAVSDAIRRSRAGLQDPRRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K      ++    +D +     +D V+Q  L +   R EFL RI++I+ F 
Sbjct: 725 -----ETFEKYPKDTERA----IDES-----RDEVLQ--LLKQTVRPEFLNRIDDIIMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  ++ ++V  +L    +    +  +    D  ++ +   G+D  +GAR +K  ++++
Sbjct: 769 PLNAKDIRSIVRLQLQSVFRMVAKEGILLDATDEAIDYLAQKGFDPQFGARPVKRIIQKE 828

Query: 552 VVSQLA 557
           V+++L+
Sbjct: 829 VLNKLS 834


>gi|218960671|ref|YP_001740446.1| protein disaggregation chaperone [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729328|emb|CAO80239.1| protein disaggregation chaperone [Candidatus Cloacamonas
           acidaminovorans str. Evry]
          Length = 862

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/369 (35%), Positives = 218/369 (59%), Gaps = 38/369 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           + L YG +A   + ++ LL+  A  T KD    +  +  ++  I +++ K+      + +
Sbjct: 502 AQLRYGTIAAKEKELQKLLQDEA-MTKKD---RLLKEIVDEEVIAEVVSKWT--GIPVSK 555

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E+E ++   LE  L  R+VGQE  I  ++ AI+R  +G +D++ P+  F+FLG +G+G
Sbjct: 556 LAESEMQKLLELENVLAQRVVGQEEGIKALANAIRRSRSGLSDENRPIGSFIFLGPTGVG 615

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTELAK LA Y+  D ++A IRLDMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ 
Sbjct: 616 KTELAKTLASYLF-DTEKALIRLDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRR 674

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P +V+L DE++KAHPDV  VLLQ+ D+GRLTDGKG+T++ K  + +MTSN+ S EI + +
Sbjct: 675 PYSVLLLDEIEKAHPDVFNVLLQILDDGRLTDGKGRTVDFKHCVIIMTSNIGSQEIYEAS 734

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
                   E  +  P +                       IL+++F R EFL R+++I+ 
Sbjct: 735 ------DSELEQIKPRLMN---------------------ILQQYF-RPEFLNRVDDIIL 766

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEV 548
           F   +K  +  +V  +L+  A + L   N+ + +  + +E +   GYD  +GAR +K  +
Sbjct: 767 FHRLNKDHIKKIVKLQLDILASR-LANRNLQLDFSENLIEHLAEAGYDPAFGARPLKRII 825

Query: 549 ERQVVSQLA 557
           ++++   LA
Sbjct: 826 QKEIEDTLA 834


>gi|420150704|ref|ZP_14657861.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           335 str. F0486]
 gi|394751796|gb|EJF35541.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           335 str. F0486]
          Length = 868

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 23/306 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE+ L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLNLEKELHRRVVGQEEAIEAVSDAIRRSRAGLQDPRRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K      ++    +D +     +D V+Q  L +   R EFL RI++I+ F 
Sbjct: 725 -----ETFEKYPKDTERA----IDES-----RDEVLQ--LLKQTVRPEFLNRIDDIIMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  ++ ++V  +L    +    +  +    D  ++ +   G+D  +GAR +K  ++++
Sbjct: 769 PLNAKDIRSIVRLQLQSVFRMVAKEGILLDATDEAIDYLAQKGFDPQFGARPVKRIIQKE 828

Query: 552 VVSQLA 557
           V+++L+
Sbjct: 829 VLNKLS 834


>gi|344199838|ref|YP_004784164.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
 gi|343775282|gb|AEM47838.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
          Length = 866

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/325 (36%), Positives = 193/325 (59%), Gaps = 29/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E+ +   +E+RL+ R+VGQ  A+  +S AI+R   G +D   P   FLFLG +G+GKT
Sbjct: 558 EGEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRAGLSDPRRPNGSFLFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL+K LA ++  D ++  +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 618 ELSKALAEFLF-DSEDHLVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S+ I      
Sbjct: 677 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRI------ 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                +EF +      K     + V +    +DH           R EFL RI+E+V F 
Sbjct: 731 -----QEFGR------KGDYDGMRVAVMDVVQDHF----------RPEFLNRIDELVIFH 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  +L  +   ++ F   +  ++    ++ D  ++ +   GYD  YGAR +K  ++R+
Sbjct: 770 PLTAVQLREITEIQMGFLRARLRERDMGLVLSDGALDRLAEVGYDPAYGARPLKRVIQRE 829

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + + LA    +   G G  + + ++
Sbjct: 830 IENPLAQQLLRGDFGPGEIIEVLLE 854


>gi|290990915|ref|XP_002678081.1| heat shock protein 101 [Naegleria gruberi]
 gi|284091692|gb|EFC45337.1| heat shock protein 101 [Naegleria gruberi]
          Length = 891

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 223/388 (57%), Gaps = 39/388 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKD-----NSGHIPSDYAEDANIKQILQKYAEKY 245
           S L YG +    E ++ L K        D     NS ++ SD      I +++ ++    
Sbjct: 511 SDLKYGAIPEIEESIQSLKKKIEQKEEDDRKNGVNSANMTSDVVTPEQINEVIARWT--G 568

Query: 246 ADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLG 304
             +QR  E+E+ +   LE+RL  R+VGQE AI  +S +I R + G ++ + P+  FLFLG
Sbjct: 569 IPVQRLNESEKDKVLKLEERLMKRVVGQEDAIKSLSESIIRSKAGLSNPNKPIGSFLFLG 628

Query: 305 SSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTK 364
           SSG+GKT LAK +A+ +  D+K   +R+DMSE  E+H V++LIG+P GY+G+ D  QLT+
Sbjct: 629 SSGVGKTYLAKSIAYELFDDEKH-MVRIDMSELMEQHSVSRLIGSPAGYVGYSDDNQLTE 687

Query: 365 RLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNE 424
            +++ P  VVLFDE++KAHP VL VLLQL D+GRLTDG+G+T++ K+ + +MTSN+ S  
Sbjct: 688 PVRRQPYTVVLFDEIEKAHPRVLNVLLQLLDDGRLTDGQGRTVDFKNTVIIMTSNIGS-- 745

Query: 425 IAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRI 484
             +H L +    +E                  T+ +   + V Q     HF   EFL R+
Sbjct: 746 --KHFLTMNDNNKE------------------TVKKQVMNEVRQ-----HF-TPEFLNRL 779

Query: 485 NEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARS 543
           ++I++F P +   L  +V  ++    ++ L + +I+I + D   E ++++G+D +YGAR 
Sbjct: 780 DDILFFEPLTSKHLVNVVRLQMESLTER-LKERDISIDIRDSACELVISEGFDPNYGARP 838

Query: 544 IKHEVERQVVSQLAAAHEKSVIGKGSFV 571
           +   +++ +V++L+    K  +  GS +
Sbjct: 839 LARFIQKHIVTELSKLMLKGELRDGSQI 866


>gi|345870658|ref|ZP_08822609.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
 gi|343921471|gb|EGV32187.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
          Length = 865

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/311 (38%), Positives = 189/311 (60%), Gaps = 29/311 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  E E  +   +EQ ++ R+VGQ  A+  +S AI+R   G +D   P+  FLFLG +
Sbjct: 548 VSRMLEGEREKLLRMEQAIEQRVVGQNEAVRAVSDAIRRSRAGLSDPARPIGSFLFLGPT 607

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +
Sbjct: 608 GVGKTELCKSLASFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAI 666

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +++L DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++A+ VMTSNL S+ I 
Sbjct: 667 RRRPYSLILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSDVIQ 726

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           Q A      GE+                        KD V++ +   H  R EF+ R++E
Sbjct: 727 QMA------GEDNYA-------------------EMKDAVMEVV--SHAFRPEFINRLDE 759

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           IV F P  ++++  +   ++++  K+  ++     V D  ++ +   G+D  YGAR +K 
Sbjct: 760 IVVFHPLQRAQIRAIARIQIDYLQKRLAERDMKLAVNDAALDHLGEAGFDPVYGARPLKR 819

Query: 547 EVERQVVSQLA 557
            +  Q+ + LA
Sbjct: 820 AIRAQLENPLA 830


>gi|16331154|ref|NP_441882.1| ClpB protein [Synechocystis sp. PCC 6803]
 gi|383322897|ref|YP_005383750.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|383326066|ref|YP_005386919.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
 gi|383491950|ref|YP_005409626.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|384437218|ref|YP_005651942.1| ClpB protein [Synechocystis sp. PCC 6803]
 gi|451815311|ref|YP_007451763.1| ClpB protein [Synechocystis sp. PCC 6803]
 gi|54035750|sp|P74459.1|CLPB1_SYNY3 RecName: Full=Chaperone protein ClpB 1
 gi|1653648|dbj|BAA18560.1| ClpB protein [Synechocystis sp. PCC 6803]
 gi|339274250|dbj|BAK50737.1| ClpB protein [Synechocystis sp. PCC 6803]
 gi|359272216|dbj|BAL29735.1| ClpB protein [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|359275386|dbj|BAL32904.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|359278556|dbj|BAL36073.1| ClpB protein [Synechocystis sp. PCC 6803 substr. PCC-P]
 gi|407961469|dbj|BAM54709.1| ClpB protein [Bacillus subtilis BEST7613]
 gi|451781280|gb|AGF52249.1| ClpB protein [Synechocystis sp. PCC 6803]
          Length = 898

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 193/313 (61%), Gaps = 30/313 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  E E ++   LE  L  R++GQ+ A+  +SAAI+R   G  D   P+  FLF+G +
Sbjct: 563 MNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRARAGMKDPSRPIGSFLFMGPT 622

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA ++  D +EA +R+DMSEY EKH V++LIGAPPGY+G+++GGQL++ +
Sbjct: 623 GVGKTELARALAGFLF-DSEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLSEAV 681

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVL DEV+KAH DV  +LLQ+ D+GR+TD +G+ ++ ++ I VMTSN+ S+   
Sbjct: 682 RRRPYSVVLLDEVEKAHLDVFNILLQVLDDGRITDSQGRVVDFRNTIIVMTSNIGSD--- 738

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
            H L L  +  ++ K    + +S                     L++HF R EFL RI++
Sbjct: 739 -HILSLSADDADYDKMQKQVLQS---------------------LRKHF-RPEFLNRIDD 775

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           ++ F    + EL  +V  ++    +K LD+  I + + D  ++ I++ GYD  YGAR +K
Sbjct: 776 LIIFHTLKRDELRRIVVLQIK-RIEKLLDEQKITLSLSDAALDHIVSAGYDPTYGARPLK 834

Query: 546 HEVERQVVSQLAA 558
             ++RQ+ + +A 
Sbjct: 835 RAIQRQLENPIAT 847


>gi|89890835|ref|ZP_01202344.1| ATP-dependent Clp protease [Flavobacteria bacterium BBFL7]
 gi|89516980|gb|EAS19638.1| ATP-dependent Clp protease [Flavobacteria bacterium BBFL7]
          Length = 868

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 185/307 (60%), Gaps = 25/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQ+ AI  +S A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSERDKLLKLEDELHKRVVGQQEAIIAVSDAVRRSRAGLQDQKKPVGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D+  +  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALADYLFNDEN-SMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ +N I      
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGANLIQ----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                + F K          + +  ++    K  V+  + +R   R EF+ RI++IV F 
Sbjct: 725 -----DRFEK---------ANTVTESLLEETKKEVLIALKQRV--RPEFINRIDDIVMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P +K+E+  +V  +L     K L    I I      +E +   GYD  YGAR +K  +++
Sbjct: 769 PLTKNEIQQIVSLQLK-GVTKMLALQGITIDATPAAIELLAVQGYDPQYGARPVKRVIQK 827

Query: 551 QVVSQLA 557
            V+++L+
Sbjct: 828 NVLNELS 834


>gi|331658742|ref|ZP_08359684.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
 gi|419912524|ref|ZP_14430975.1| protein disaggregation chaperone [Escherichia coli KD1]
 gi|432899701|ref|ZP_20110253.1| chaperone ClpB [Escherichia coli KTE192]
 gi|433029525|ref|ZP_20217380.1| chaperone ClpB [Escherichia coli KTE109]
 gi|331053324|gb|EGI25353.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
 gi|388391521|gb|EIL52984.1| protein disaggregation chaperone [Escherichia coli KD1]
 gi|431425234|gb|ELH07305.1| chaperone ClpB [Escherichia coli KTE192]
 gi|431542333|gb|ELI17504.1| chaperone ClpB [Escherichia coli KTE109]
          Length = 857

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA IR+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMIRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLDV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|170765528|ref|ZP_02900339.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
 gi|170124674|gb|EDS93605.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
          Length = 857

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 208/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA IR+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMIRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V  ++ V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNENRIVA 855


>gi|428216552|ref|YP_007101017.1| ATP-dependent chaperone ClpB [Pseudanabaena sp. PCC 7367]
 gi|427988334|gb|AFY68589.1| ATP-dependent chaperone ClpB [Pseudanabaena sp. PCC 7367]
          Length = 875

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/320 (36%), Positives = 195/320 (60%), Gaps = 28/320 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E E+ +   LE  L  R++GQ  A+  +S +I+R   G  D + P+  F+F+G +G+GKT
Sbjct: 559 ETEKEKLLFLEDELHQRVIGQSEAVTAVSDSIQRSRAGLADPNRPIASFIFMGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D ++A +R+DMSEY EKH V++L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKALAAYLF-DAEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEIVRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  ++LQ+ D+GR+TD +G+T++ K+ + +MTSN+ S    Q  L 
Sbjct: 678 AVILFDEIEKAHPDVFNIMLQILDDGRVTDSQGRTVDFKNTVIIMTSNIGS----QFILD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  +   + +                     +D V+   L+ +FR  EFL R++EI+ F 
Sbjct: 734 VVGDDSRYEE--------------------MRDRVINA-LRANFR-PEFLNRVDEIIIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              K+EL  +V  ++    K+ +D+     + +  ++ I   GYD  YGAR +K  ++RQ
Sbjct: 772 ALVKAELREIVKLQIKRLEKRLVDRKMGLKLSEAALDFIAEVGYDPVYGARPLKRIIQRQ 831

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           + +Q+A +  +   G+G  +
Sbjct: 832 IETQIAKSLLRGEFGEGDTI 851


>gi|319649991|ref|ZP_08004140.1| ClpB protein [Bacillus sp. 2_A_57_CT2]
 gi|317398172|gb|EFV78861.1| ClpB protein [Bacillus sp. 2_A_57_CT2]
          Length = 865

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE  L +R++GQ+ A+ ++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 558 EGEREKLLRLESILHERVIGQDEAVQLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 618 ELAKALAQSLF-DSEEQIIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 677 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS-----HFLL 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            R  GEE                   IS   ++ V+   L+ HF R EFL R++EI+ F 
Sbjct: 732 ERSSGEE------------------DISEETRETVLGQ-LRSHF-RPEFLNRVDEIILFK 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+ ++V + +     +  D+H    + D   E I  +G+D  YGAR +K  ++R 
Sbjct: 772 PLALNEIKSIVLKLITQLQARLSDQHIKLSINDNAKEYIAENGFDPVYGARPLKRFIQRN 831

Query: 552 VVSQLA 557
           V + LA
Sbjct: 832 VETALA 837


>gi|423347894|ref|ZP_17325579.1| chaperone ClpB [Parabacteroides merdae CL03T12C32]
 gi|409215380|gb|EKN08381.1| chaperone ClpB [Parabacteroides merdae CL03T12C32]
          Length = 862

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 194/307 (63%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E+ +   LE  L  R++GQE AI+ I+ A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEKEKLLHLESELHTRVIGQEEAISAIANAVRRSRAGLQDPKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEK    +LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENMMTRIDMSEYQEKFSATRLIGAPPGYVGYDEGGQLTEAIRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I      
Sbjct: 670 SVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNIGSSLIR----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K TP   ++    +D T     K  V++ +LK+   R EFL RI++I+ F 
Sbjct: 725 -----ENFEKMTP---ETHDKVVDET-----KVQVLE-LLKKTI-RPEFLNRIDDIIMFT 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ E+  +V  +L+   KK L ++ I + +       ++D G+D  +GAR +K  +++
Sbjct: 770 PLNEEEIRKIVTLQLD-SVKKMLAQNGIALDFTDAALAFISDKGFDPQFGARPVKRVIQK 828

Query: 551 QVVSQLA 557
            V+++L+
Sbjct: 829 YVLNELS 835


>gi|194334959|ref|YP_002016819.1| ATPase AAA [Prosthecochloris aestuarii DSM 271]
 gi|194312777|gb|ACF47172.1| ATPase AAA-2 domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 440

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/307 (38%), Positives = 192/307 (62%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E ++   +E  L +R++GQ++A+  +S A+KR   G  D+  P+  F+FLG +G+GKT
Sbjct: 126 QSERQKLLHIEAELHERVIGQDNAVRAVSEAVKRSRAGMGDEKKPIGSFIFLGPTGVGKT 185

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA Y+  D ++A IR+DMSEY E H V++L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 186 ELARTLADYLF-DDEDAMIRIDMSEYMESHTVSRLVGAPPGYVGYEEGGQLTEAVRRKPF 244

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG T+  K+ I +MTSN+ +  I      
Sbjct: 245 SVVLLDEIEKAHPDVFNILLQILDDGRLTDSKGHTVNFKNTIIIMTSNIGAQMIQSE--- 301

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         + K  G N +  +    +D + Q +LK+   R EFL RI+EI+ F 
Sbjct: 302 --------------MEKMSGVNREEVLE-TLQDKLFQ-LLKQQV-RPEFLNRIDEIILFT 344

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ ++  +V  + +   K AL + NI +    +  + LA  G+D  +GAR +K  ++R
Sbjct: 345 PLTQEDIAKIVTIQFDLIRKLAL-RQNITLTLSDEALSWLASAGFDPAFGARPLKRVMQR 403

Query: 551 QVVSQLA 557
           Q+ ++L+
Sbjct: 404 QITNKLS 410


>gi|376004657|ref|ZP_09782304.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
 gi|375327005|emb|CCE18057.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
          Length = 872

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/307 (38%), Positives = 191/307 (62%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   LE  L  R+VGQ+ A+  ++ +I+R   G +D + P+  F+FLG +G+GKT
Sbjct: 559 ESEKEKLLHLEDELHQRVVGQDEAVTAVADSIQRSRAGLSDPNRPVASFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +EA +R+DMSEY EKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ELAKALASYLF-DTEEAIVRVDMSEYMEKHSVSRLLGAPPGYVGYDEGGQLTEAIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  V+LQ+ D+GR+TD +G+T++ K+ I +MTSN+ S    Q+ L 
Sbjct: 678 AVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGRTVDFKNTIIIMTSNIGS----QYILD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  +   + +                       H V   ++  F R EFL RI+EI+ F 
Sbjct: 734 IAGDDSRYEEMR---------------------HRVMDSMRSAF-RPEFLNRIDEIIIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
                +L  +V  +L   +++ L++H +++         LAD G+D  YGAR +K  +++
Sbjct: 772 SLKPHQLREIVLLQLGNLSQR-LEQHKMSLKLSESALDYLADVGFDPVYGARPLKRAIQQ 830

Query: 551 QVVSQLA 557
           ++ +Q+A
Sbjct: 831 ELETQIA 837


>gi|422369617|ref|ZP_16450017.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
 gi|315298640|gb|EFU57895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
          Length = 861

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 537 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA IR+DMSE+ EKH V++L+GA
Sbjct: 595 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMIRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLDV 748

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 749 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 805

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 806 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 859


>gi|428780885|ref|YP_007172671.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
 gi|428695164|gb|AFZ51314.1| ATP-dependent chaperone ClpB [Dactylococcopsis salina PCC 8305]
          Length = 894

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/343 (35%), Positives = 207/343 (60%), Gaps = 32/343 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +++I +I+ K+      + R  E+E +R   LE  L +R++GQ+ A++ +SAAI+R   G
Sbjct: 556 ESDIAEIVAKWTS--IPVNRLLESERQRLLGLEGYLHERVIGQKEAVSAVSAAIRRARAG 613

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D   P+  FLF+G +G+GKTELA+ +A ++  D +E+ IR+DMSEY EKH V++L+GA
Sbjct: 614 MKDPARPIGSFLFMGPTGVGKTELARAMAEFLF-DTEESLIRIDMSEYMEKHSVSRLVGA 672

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQL++++++ P +VVL DEV+KAHPDV  +LLQ+ D+GR+TD +G+ I+ 
Sbjct: 673 PPGYVGYEEGGQLSEQIRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRVIDF 732

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ I VMTSN+  ++I    LQ  +E  ++ +    + ++                    
Sbjct: 733 RNTIIVMTSNIGGDDI----LQFSQEDSQYEQMRKKVLEA-------------------- 768

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
            L+ HF R EFL RI++++ F    + EL  ++  +L    +K L +  + I      + 
Sbjct: 769 -LRTHF-RPEFLNRIDDLIIFHTLKREELAEIITIQLR-RIEKLLSQQKLTIKLTAAAQN 825

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
            L D GYD  YGAR +K  ++R++ + +A    +   G+G  +
Sbjct: 826 YLVDVGYDPVYGARPLKRAIQRELENPIATKILEMAFGEGDTI 868


>gi|423398009|ref|ZP_17375210.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
 gi|423408875|ref|ZP_17386024.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
 gi|401648684|gb|EJS66278.1| chaperone ClpB [Bacillus cereus BAG2X1-1]
 gi|401657145|gb|EJS74657.1| chaperone ClpB [Bacillus cereus BAG2X1-3]
          Length = 866

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQTLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEEDGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVELTNSAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|429751497|ref|ZP_19284413.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           326 str. F0382]
 gi|429180588|gb|EKY21801.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           326 str. F0382]
          Length = 867

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 23/306 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE+ L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLNLEKELHRRVVGQEEAIEAVSDAIRRSRAGLQDPRRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K      ++    +D +     +D V+Q  L +   R EFL RI++I+ F 
Sbjct: 725 -----ETFEKYPKDTERA----IDES-----RDEVLQ--LLKQTVRPEFLNRIDDIIMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  ++ ++V  +L    +    +  +    D  ++ +   G+D  +GAR +K  ++++
Sbjct: 769 PLNAKDIRSIVRLQLQSVFRMVAKEGILLDATDEAIDYLAQKGFDPQFGARPVKRIIQKE 828

Query: 552 VVSQLA 557
           V+++L+
Sbjct: 829 VLNKLS 834


>gi|225174179|ref|ZP_03728178.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
 gi|225169964|gb|EEG78759.1| ATP-dependent chaperone ClpB [Dethiobacter alkaliphilus AHT 1]
          Length = 858

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 189/311 (60%), Gaps = 27/311 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L R  E E+ +   L+  L +R++GQ+ A+N ++ A+ R  +G  D   P+  F+FLG +
Sbjct: 547 LSRLLEGEKEKLLRLDDILHERVIGQDEAVNAVTDAVIRARSGLKDPKRPIGSFIFLGPT 606

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D +E  IR+DMSEY EKH VA+LIGAPPGY+G+D+GGQLT+ +
Sbjct: 607 GVGKTELARALAESLF-DSEENMIRIDMSEYMEKHTVARLIGAPPGYVGYDEGGQLTEAV 665

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAH DV  VLLQ+ D+GRLTD  G+T++ K+ I +MTSNL S  + 
Sbjct: 666 RRKPYSVLLFDEIEKAHYDVFNVLLQILDDGRLTDSHGRTVDFKNTIIIMTSNLGSMHLL 725

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           ++A                     G + D  I+   KD V+   L+ HF R EFL R++E
Sbjct: 726 ENA---------------------GESGD--IAESVKDKVMAE-LRSHF-RPEFLNRVDE 760

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           IV F P +  E   ++  +L    K+  +++    + +   E +   GYD  YGAR +K 
Sbjct: 761 IVLFKPLTLEETKQIIDLQLELLYKRLAERYITLEMTEAAKEHVARAGYDPVYGARPLKR 820

Query: 547 EVERQVVSQLA 557
            ++RQV + LA
Sbjct: 821 YLQRQVETVLA 831


>gi|218781272|ref|YP_002432590.1| ATP-dependent chaperone ClpB [Desulfatibacillum alkenivorans AK-01]
 gi|218762656|gb|ACL05122.1| ATP-dependent chaperone ClpB [Desulfatibacillum alkenivorans AK-01]
          Length = 862

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/307 (40%), Positives = 186/307 (60%), Gaps = 32/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E+ +   +E RL+ R++GQ  AI  +S A++R  +G  D + P+  F+F+G +G+GKT
Sbjct: 558 ESEKEKLVRMESRLEKRVIGQNDAIVAVSNAVRRARSGLQDPNRPIGSFIFMGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA +I  D  +A +R+DMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 618 ELAKALAEFIF-DDDQAIVRVDMSEYMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  VLLQ+ D+GR+TDG GKT++ K+ I +MTSN+ S  I      
Sbjct: 677 SVILFDEIEKAHPDVFNVLLQILDDGRMTDGHGKTVDFKNTIIIMTSNVGSQFI------ 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                           +  GS+    + R   D +      R   R EFL R++E V F 
Sbjct: 731 ----------------QDLGSSNPEEMRRRVMDAL------RATFRPEFLNRVDETVIFN 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             S  +L  +V  + +   K+  D+H +N+V   +   +L   GYD  YGAR +K  ++R
Sbjct: 769 SLSVEDLAQVVRIQTDRLIKRLTDQH-VNLVITEEALVLLGQKGYDPAYGARPLKRVIQR 827

Query: 551 QVVSQLA 557
            + +QLA
Sbjct: 828 SLENQLA 834


>gi|28212201|ref|NP_783145.1| negative regulator of genetic competence mecB/clpC [Clostridium
           tetani E88]
 gi|28204645|gb|AAO37082.1| negative regulator of genetic competence mecB/clpC [Clostridium
           tetani E88]
          Length = 811

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 198/329 (60%), Gaps = 21/329 (6%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   LE+ L +R++GQ  A+  +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 496 EKESERLLKLEETLHNRVIGQNEAVKSVSRAVRRARVGLKDPNRPIGSFIFLGPTGVGKT 555

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL+K LA  +  D+  + IR+DMSEY EKH V++LIG+PPGY+G+D+GGQLT+++++ P 
Sbjct: 556 ELSKALAEAMFGDES-SMIRIDMSEYMEKHAVSRLIGSPPGYVGYDEGGQLTEKVRRHPY 614

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQ+ ++GRLTDGKGKT+  K+ I +MTSN+ ++ I      
Sbjct: 615 SVILFDEIEKAHPDVFNILLQILEDGRLTDGKGKTVNFKNTIIIMTSNVGASTI------ 668

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                    K+  S+  +   +   +     K++V++  LKR F R EFL RI++I+ F 
Sbjct: 669 ---------KKQKSLGFAISDDKIESEYEQMKENVMEE-LKRSF-RPEFLNRIDDIIVFH 717

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
              + +L  +V   L     + L   +INI +D   +  LA  G+D  YGAR ++  + +
Sbjct: 718 KLREEDLEKIVALMLESVTHR-LKNQDINISFDKKSQKFLAKKGFDPVYGARPLRRAITK 776

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSK 579
            V  +L+    K  I KG  V + V   K
Sbjct: 777 AVEDKLSEEILKGSIEKGDKVLVSVNEEK 805


>gi|384215220|ref|YP_005606386.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium
           japonicum USDA 6]
 gi|354954119|dbj|BAL06798.1| ATP-dependent protease, ATP-binding subunit [Bradyrhizobium
           japonicum USDA 6]
          Length = 880

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/353 (37%), Positives = 204/353 (57%), Gaps = 35/353 (9%)

Query: 208 LLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLK 267
           L K  AD   ++ SG +  +     +I Q++ ++     D   E E E+  K  +E++L 
Sbjct: 511 LEKQLADIEAREGSGDMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLK--MEEQLG 568

Query: 268 DRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKK 326
            R+VGQ  A+  ++ A++R   G  D + P   F+FLG +G+GKTEL K LA Y+  D+ 
Sbjct: 569 KRVVGQAEAVRAVATAVRRSRAGLQDPNRPTGSFMFLGPTGVGKTELTKALAEYLFNDET 628

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
            A +RLDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV
Sbjct: 629 -AMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDV 687

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
             VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S      
Sbjct: 688 FNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEYLVNQ-----PEGEDTSA----- 737

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
                           ++ V+  +++ HF R EFL R++EI+ F    +SE+  +V  E+
Sbjct: 738 ---------------VREQVMG-MVRGHF-RPEFLNRVDEIILFHRLQRSEMGRIV--EI 778

Query: 507 NFWA-KKALDKHNINIVWD-IDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
            F   +K L    I +  D    + + A G+D  YGAR +K  V+R +   LA
Sbjct: 779 QFARLQKLLTDRKIVLTLDAAGRDWLAAKGWDPAYGARPLKRVVQRYLQDPLA 831


>gi|78358452|ref|YP_389901.1| ATPase AAA [Desulfovibrio alaskensis G20]
 gi|78220857|gb|ABB40206.1| ATPase AAA-2 domain protein [Desulfovibrio alaskensis G20]
          Length = 949

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 196/317 (61%), Gaps = 29/317 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ +++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADSVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDEG-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RKE-GEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +KS+                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 RGAGGEEYVK-----TKSE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  +  
Sbjct: 815 ALGKEEIRHIVGLQLDRVARNAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGK 567
           ++ + LA       IGK
Sbjct: 874 ELETALAREMLGGSIGK 890


>gi|423065707|ref|ZP_17054497.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
 gi|406712761|gb|EKD07940.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
          Length = 872

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 191/307 (62%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   LE  L  R+VGQ+ A+  ++ +I+R   G +D + P+  F+FLG +G+GKT
Sbjct: 559 ESEKEKLLHLEDELHQRVVGQDEAVTAVADSIQRSRAGLSDPNRPVASFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +EA +R+DMSEY EKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ELAKALASYLF-DTEEAIVRVDMSEYMEKHSVSRLLGAPPGYVGYDEGGQLTEAIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  V+LQ+ D+GR+TD +G+T++ K+ I +MTSN+ S    Q+ L 
Sbjct: 678 AVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGRTVDFKNTIIIMTSNIGS----QYILD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  +   + +                       H V   ++  F R EFL RI+EI+ F 
Sbjct: 734 IAGDDSRYEEMR---------------------HRVMDSMRSAF-RPEFLNRIDEIIIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
                +L  +V  +L   +++ L++H +++         LAD G+D  YGAR +K  ++R
Sbjct: 772 SLKPHQLREIVRLQLVNLSRR-LEQHKMSLKLSESALDYLADVGFDPVYGARPLKRAIQR 830

Query: 551 QVVSQLA 557
           ++ +Q+A
Sbjct: 831 ELETQIA 837


>gi|392953749|ref|ZP_10319303.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
 gi|391859264|gb|EIT69793.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
          Length = 863

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 185/307 (60%), Gaps = 27/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R+VGQ  A+  +S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 554 EGERDKLLRMEEALHQRVVGQNEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 613

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ E+H VA+LIGAPPGY+G ++GG LT+ +++ P 
Sbjct: 614 ELCKALASFLF-DTEEAMVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRRPY 672

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++A+ VMTSNL SN I      
Sbjct: 673 SVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSNLI------ 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         +  +Q S+ D    R      V  ++ +HF R EF+ RI+E V F 
Sbjct: 727 ------------QDMMSTQSSSNDYAAIR----EAVMTVVGQHF-RPEFINRIDESVVFH 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVER 550
           P    ++ ++   +     K+ L + NI I + D  ++ I   GYD  YGAR +K  ++ 
Sbjct: 770 PLGSQQIRSIAKVQSQNVVKR-LAERNIAIEFSDAALDKIAEAGYDPVYGARPLKRAIQT 828

Query: 551 QVVSQLA 557
            V + LA
Sbjct: 829 LVENPLA 835


>gi|217076807|ref|YP_002334523.1| chaperone ClpB [Thermosipho africanus TCF52B]
 gi|217036660|gb|ACJ75182.1| chaperone ClpB [Thermosipho africanus TCF52B]
          Length = 788

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 202/339 (59%), Gaps = 37/339 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E+ +    E+ +  R+V QE A+ +++ AI++   G  D + P+  FLFLG SG+GKT
Sbjct: 477 ESEKEKLLKFEELVHQRMVDQEEAVKVVADAIRKARAGIKDPNRPIGTFLFLGPSGVGKT 536

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK +A  +    + A IR+DMSEY EKH VA+LIGAPPGY+G+D GGQLT+ +++ P 
Sbjct: 537 ELAKTIAELLF-GSENALIRIDMSEYMEKHSVARLIGAPPGYVGYDQGGQLTEAVRRKPY 595

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHP+V  VLLQ+FD+GRLTDGKG T++ ++ I +MTSNLAS++I    L+
Sbjct: 596 SVILLDEVEKAHPEVFNVLLQVFDDGRLTDGKGNTVDFRNTIIIMTSNLASDKI----LR 651

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             + G +F K    I +S   +L                  +H+ R EF+ RI+ +V F 
Sbjct: 652 KVEAGVDFEK----IEESVREDL------------------KHYFRPEFINRIDHVVIFK 689

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +K  +  +V + L    +  L + N+ I      +  LA+ GYD  +GAR ++  +ER
Sbjct: 690 PLTKEHMKEIVEK-LVARLENRLKEKNLKIKLTEKAKEYLAEKGYDPAFGARPLRRLIER 748

Query: 551 QVVSQLAAAHEKSVIGKGSFV-------RLYVQWSKEVS 582
           ++ + L+       I +G  V       +L V+  KE++
Sbjct: 749 EIETPLSVKIIAGEIAEGDIVLVDEENGKLIVEKEKELT 787


>gi|336124918|ref|YP_004566966.1| ClpV protein [Vibrio anguillarum 775]
 gi|335342641|gb|AEH33924.1| ClpV protein [Vibrio anguillarum 775]
          Length = 863

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 189/306 (61%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E  L  R++GQ  A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 558 EAEKEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 618 ELCKTLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S++I +    
Sbjct: 677 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSQIQEKFAS 736

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  EG                          K  V++ I+ +HF R EFL R++E V F 
Sbjct: 737 LDYEG-------------------------IKKEVME-IVGKHF-RPEFLNRVDESVVFH 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P ++ ++ ++   +L    K+  +K     V +  +E I   G+D  YGAR +K  +++ 
Sbjct: 770 PLAQEQIKSIASIQLARLGKRMEEKGYQLEVSEKALELISQVGFDPVYGARPLKRAIQQS 829

Query: 552 VVSQLA 557
           V + LA
Sbjct: 830 VENPLA 835


>gi|116054188|ref|YP_788632.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|421172222|ref|ZP_15629998.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa CI27]
 gi|115589409|gb|ABJ15424.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|404538083|gb|EKA47640.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa CI27]
          Length = 850

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 495 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 554

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 555 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 613

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 614 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 671

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 672 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 710

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 711 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 767

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 768 RQQLETRLATAMLKGEVKEGETVTFF 793


>gi|421784902|ref|ZP_16221337.1| ATP-dependent protease Clp, ATPase subunit [Serratia plymuthica
           A30]
 gi|407752908|gb|EKF63056.1| ATP-dependent protease Clp, ATPase subunit [Serratia plymuthica
           A30]
          Length = 924

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/315 (40%), Positives = 194/315 (61%), Gaps = 31/315 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E +L++R+VGQ+ A+  +S A++    G +    P+  FLFLG +G+GKTE
Sbjct: 582 EERKKLLNMEDKLRERVVGQDDAVEAVSDAVRLSRAGLSQAHRPIATFLFLGPTGVGKTE 641

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK +A  +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 642 LAKAIAETVFGDE-QAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 700

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  +   + TSNL S  I  +A   
Sbjct: 701 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTTIIATSNLGSAVIMNNASL- 759

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
             E E  S +T                    D ++Q +LK HF R EFL RI+E++ F  
Sbjct: 760 -PEAERKSDKT------------------IHDELMQ-VLKGHF-RPEFLNRIDEVIVFNS 798

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQ 551
            S+  +  +V  +L    + A    NI + + D  VE ++  GY   +GAR +K  + ++
Sbjct: 799 LSQENIRLIVNIQLEHLTRTAA-AQNITLNIADSLVEHLVDVGYQPDFGARELKRRIRQE 857

Query: 552 VVSQLAAAHEKSVIG 566
           V ++LA    K ++G
Sbjct: 858 VETRLA----KEILG 868


>gi|224475673|ref|YP_002633279.1| ClpC ATPase family protein [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420280|emb|CAL27094.1| ClpC ATPase family protein [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 821

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 188/312 (60%), Gaps = 22/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L R  E E  R   LE  L +R++GQ+ A+  IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTRLNETESERLLNLEDTLHERVIGQKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D+ +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDE-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+ ++ ++ + VMTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGFLTDTKGRRVDFRNTVIVMTSNVGAQELQ 666

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                    G            S+G + +   S   K+      LK  F R EFL R+++
Sbjct: 667 DQRFTGFGGG-----------SSEGQDYETIRSTMLKE------LKNAF-RPEFLNRVDD 708

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V + +N    + L + +INI V +   E I  +GYD  YGAR + 
Sbjct: 709 IIVFHKLNKDELKEIVTKMVNKLTDR-LSEQDINISVTEKAKEKIAEEGYDPQYGARPLI 767

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 768 RAIQKTVEDNLS 779


>gi|429757231|ref|ZP_19289778.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           324 str. F0483]
 gi|429169163|gb|EKY10937.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           324 str. F0483]
          Length = 864

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 189/306 (61%), Gaps = 23/306 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE+ L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLNLEKELHRRVVGQEEAIEAVSDAIRRSRAGLQDPRRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K      ++    +D +     +D V+Q  L +   R EFL RI++I+ F 
Sbjct: 725 -----ETFEKYPKDTERA----IDES-----RDEVLQ--LLKQTVRPEFLNRIDDIIMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + + + ++V  +L    +    +  +    D  ++ +   G+D  +GAR +K  ++++
Sbjct: 769 PLNANNIRSIVRLQLQSVFRMVAKEGILLDATDEAIDYLAQKGFDPQFGARPVKRIIQKE 828

Query: 552 VVSQLA 557
           V+++L+
Sbjct: 829 VLNKLS 834


>gi|225011321|ref|ZP_03701776.1| ATP-dependent chaperone ClpB [Flavobacteria bacterium MS024-3C]
 gi|225004536|gb|EEG42503.1| ATP-dependent chaperone ClpB [Flavobacteria bacterium MS024-3C]
          Length = 866

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/319 (42%), Positives = 195/319 (61%), Gaps = 36/319 (11%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L   +VGQE AI  +S AI+R + G  D D PL  FLFLG++G+GKTELAK LA +
Sbjct: 560 LEKVLHKNVVGQEEAIIAVSDAIRRSKAGLQDTDKPLGSFLFLGTTGVGKTELAKTLAQF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D   A  R+DMSEYQEKH V++L+GAPPGY+G+++GGQLT+ +++ P +VVL DE++
Sbjct: 620 LFNDPN-AMTRIDMSEYQEKHAVSRLVGAPPGYVGYEEGGQLTEAIRRKPYSVVLLDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPD   +LLQ+ DEGRLTD KG+  + K+AI +MTSN+ S+ I Q A         F 
Sbjct: 679 KAHPDTFNILLQVLDEGRLTDNKGRVADFKNAIIIMTSNIGSS-IIQDA---------FD 728

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
             T +I K+         +   K+ V+   LK+  +  EFL RI++IV F P +K  +  
Sbjct: 729 HET-NIEKA---------TELAKEGVLNA-LKQQVK-PEFLNRIDDIVMFSPLTKEHIKE 776

Query: 501 LVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    K+  +K    I  DI    + T+   GYD  YGAR +K  ++++V+++L+
Sbjct: 777 IVKIQMKQLQKQLNEKQ---ITIDISPQGIATLALKGYDPQYGARPLKRVIQKEVLNKLS 833

Query: 558 AA------HEKSVIGKGSF 570
            A      H  SV+   SF
Sbjct: 834 KAILGGDIHTDSVVLIDSF 852


>gi|218889199|ref|YP_002438063.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa LESB58]
 gi|218769422|emb|CAW25182.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa LESB58]
          Length = 850

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 495 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 554

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 555 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 613

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 614 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 671

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 672 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 710

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 711 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 767

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 768 RQQLETRLATAMLKGEVKEGETVTFF 793


>gi|421165326|ref|ZP_15623661.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa ATCC
           700888]
 gi|404542185|gb|EKA51515.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa ATCC
           700888]
          Length = 850

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 495 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 554

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 555 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 613

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 614 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 671

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 672 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 710

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 711 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 767

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 768 RQQLETRLATAMLKGEVKEGETVTFF 793


>gi|108761289|ref|YP_632993.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Myxococcus
           xanthus DK 1622]
 gi|108465169|gb|ABF90354.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Myxococcus
           xanthus DK 1622]
          Length = 884

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 200/339 (58%), Gaps = 34/339 (10%)

Query: 221 SGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINII 280
           SG  P   AED  + ++L +       + +  E E ++   LE RL +R++GQ+ AI ++
Sbjct: 534 SGETPEVRAED--VAEVLSRMT--GIPVTQMTEDERKKLLELESRLHERVIGQDEAIRVL 589

Query: 281 SAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQE 339
           S AI+R   G  D+  P+  FLFLG +G+GKTELAK LA  +  D+K A IR DMSEY E
Sbjct: 590 SQAIRRARAGLKDESRPIGSFLFLGPTGVGKTELAKTLAELLFGDEK-ALIRFDMSEYME 648

Query: 340 KHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRL 399
           KH V++L+GAPPGY+G+++GGQLT+ +++ P +V+LFDEV+KAHPDV  +LLQ+ D+GRL
Sbjct: 649 KHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPYSVLLFDEVEKAHPDVFHMLLQVLDDGRL 708

Query: 400 TDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTIS 459
           TD +G  +  K+ + + TSNL S+ I +     RKE +E  +                  
Sbjct: 709 TDAQGTVVNFKNTVIIGTSNLGSHLIQEST--ARKEPQERMRER---------------- 750

Query: 460 RHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNI 519
                  V  +LK HF   EFL RI+E V F P ++++L  +V   L    ++ L    I
Sbjct: 751 -------VMGVLKGHF-PPEFLNRIDETVVFEPLNRAQLRAIVDLMLE-KTRRLLHGQGI 801

Query: 520 NI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           ++ V    +E ++  G+D  +GAR ++ E++R + + LA
Sbjct: 802 DLEVTPAALEALVDKGWDPTFGARPLRREIQRAIEAPLA 840


>gi|15595656|ref|NP_249150.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa PAO1]
 gi|9946319|gb|AAG03848.1|AE004483_6 probable ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa PAO1]
          Length = 850

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 495 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 554

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 555 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 613

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 614 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 671

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 672 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 710

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 711 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 767

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 768 RQQLETRLATAMLKGEVKEGETVTFF 793


>gi|421178370|ref|ZP_15635984.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa E2]
 gi|404548424|gb|EKA57375.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa E2]
          Length = 850

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 495 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 554

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 555 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 613

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 614 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 671

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 672 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 710

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 711 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 767

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 768 RQQLETRLATAMLKGEVKEGETVTFF 793


>gi|153871333|ref|ZP_02000531.1| ClpB protein [Beggiatoa sp. PS]
 gi|152072199|gb|EDN69467.1| ClpB protein [Beggiatoa sp. PS]
          Length = 826

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 187/306 (61%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ +  R+VGQ+ A++ ++ AI+R   G  D + P   FLFLG +G+GKT
Sbjct: 523 EGERDKLLRMEEAVHQRVVGQDEAVHTVANAIRRSRAGLADPNKPNGSFLFLGPTGVGKT 582

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D  EA +RLDMSE+ EKH VA+LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 583 ELCKALANFLF-DTDEAMVRLDMSEFMEKHSVARLIGAPPGYIGYDEGGYLTEAVRRKPY 641

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S  I + A  
Sbjct: 642 SVILLDEVEKAHPDVFGVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQFIQEMA-- 699

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GEE  +   +                     V  I+ +HF R EF+ R+++IV F 
Sbjct: 700 ----GEENYETMKT--------------------AVMEIVGQHF-RPEFINRVDDIVVFH 734

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  ++ +  +   ++++  K+   +H   +V DI +E +   G+D  YGAR +K  +++ 
Sbjct: 735 PLGRTHIRAIADLQIDYLRKRLQAQHMNLVVDDIALEHLGEAGFDPVYGARPLKRAIQQL 794

Query: 552 VVSQLA 557
           + + LA
Sbjct: 795 LENSLA 800


>gi|295106465|emb|CBL04008.1| ATP-dependent chaperone ClpB [Gordonibacter pamelaeae 7-10-1-b]
          Length = 886

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/342 (36%), Positives = 200/342 (58%), Gaps = 31/342 (9%)

Query: 217 VKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESA 276
           VK   G I  +   D  I +++  +      +Q+  + E  +   LE++L +R+VGQ+ A
Sbjct: 529 VKQQDGAILKEEVSDDEIAEVVSTWT--GIPVQKMMQGEMAKLVDLEEKLHERVVGQDEA 586

Query: 277 INIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMS 335
           ++ ++ AI+R   G +D D P+  FLFLG +G+GKTELAK LA Y+  D + A +R+DMS
Sbjct: 587 VSSVAGAIRRNRAGLSDPDRPIGSFLFLGPTGVGKTELAKALAEYLF-DSERAMVRIDMS 645

Query: 336 EYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFD 395
           EY EK  V +LIGAPPGY+G+D+GGQLT+ +++ P +VVL DE++KAHPDV  +LLQ+ D
Sbjct: 646 EYMEKFSVQRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLD 705

Query: 396 EGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD 455
           +GRLTDG+G+ +  K+AI +MTSN+ S  I + A    + G+E         K+    +D
Sbjct: 706 DGRLTDGQGRVVSFKNAIIIMTSNVGSQFIREFA----EHGDE---------KAMKQAID 752

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
             +   F              R EF+ RI+++V F   + + +  +V  +L     +  D
Sbjct: 753 GALRATF--------------RPEFINRIDDVVVFNALNMTNIEPIVDLQLEEVRDRLAD 798

Query: 516 KHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +     V    +E +  DGYD  +GAR +K  +++++V ++A
Sbjct: 799 RRITLDVTPAAMEHLSIDGYDPIFGARPLKRLIQKEIVDRIA 840


>gi|225012799|ref|ZP_03703233.1| ATP-dependent chaperone ClpB [Flavobacteria bacterium MS024-2A]
 gi|225003073|gb|EEG41049.1| ATP-dependent chaperone ClpB [Flavobacteria bacterium MS024-2A]
          Length = 905

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/313 (38%), Positives = 186/313 (59%), Gaps = 24/313 (7%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE +L  R+VGQE A+  +S A++R   G  D + P+  FLFLG++G+GKTELAK LA  
Sbjct: 599 LEDQLHQRLVGQEKAVEAVSDAVRRSRAGLQDQNRPIGSFLFLGTTGVGKTELAKALADV 658

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D+     R+DMSEYQE+H V++L+GAPPGY+G+++GGQLT+ +++ P +V+L DE++
Sbjct: 659 LFDDENN-ITRIDMSEYQERHAVSRLVGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIE 717

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPD   VLLQ+ DEGRLTD KG+  + K++I +MTSN+ S+EI Q A +         
Sbjct: 718 KAHPDTFNVLLQVLDEGRLTDNKGRLTDFKNSIIIMTSNMGSHEI-QTAFE--------- 767

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                       N    I+          +LK+   R EFL RI++IV F P ++ E+  
Sbjct: 768 -----------ENPKFEIAEAIAKEKAMILLKKQV-RPEFLNRIDDIVMFSPLTQKEIQK 815

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAH 560
           +V  +L   AK+   +  I    +  +E +   G+D  YG R +K  +++QV++ L+ A 
Sbjct: 816 IVGLQLALIAKRLKKQEIILNSTEEAIEQLAVLGFDPQYGGRPVKRTLQQQVLNPLSKAL 875

Query: 561 EKSVIGKGSFVRL 573
            +  + K   + L
Sbjct: 876 LEGSVSKDKAITL 888


>gi|170700934|ref|ZP_02891919.1| ATPase AAA-2 domain protein [Burkholderia ambifaria IOP40-10]
 gi|170134174|gb|EDT02517.1| ATPase AAA-2 domain protein [Burkholderia ambifaria IOP40-10]
          Length = 948

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 192/305 (62%), Gaps = 25/305 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R++GQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVIGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ ++ IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAETVFGDE-QSIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREQLMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ D  VE +   GY   +GAR +K +V + +
Sbjct: 791 LSKENIRSIVQIQLDRVVRTAAAQDITLVMGDALVEHLTEAGYQPEFGARELKRQVRQII 850

Query: 553 VSQLA 557
            ++LA
Sbjct: 851 ETKLA 855


>gi|357406325|ref|YP_004918249.1| Chaperone protein ClpB [Methylomicrobium alcaliphilum 20Z]
 gi|351718990|emb|CCE24664.1| Chaperone protein ClpB [Methylomicrobium alcaliphilum 20Z]
          Length = 859

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/370 (36%), Positives = 217/370 (58%), Gaps = 39/370 (10%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YGV+   + V EL L S A+         +  +   D  I +++ K+      + 
Sbjct: 498 MSELQYGVIP--SLVKELDLASQAEM----QEMKLLRNKVTDEEIAEVVSKWT--GIPVS 549

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGI 308
           +  E E  +   +E++++ R+VGQ  A+  +S AI+R   G +D + P   FLFLG +G+
Sbjct: 550 KMMEGERDKLLRMEEQIQKRVVGQTEALISVSNAIRRSRAGLSDPNRPNGSFLFLGPTGV 609

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++
Sbjct: 610 GKTELCKALAEFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 668

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++A+ VMTSNL S+ I + 
Sbjct: 669 KPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVVVMTSNLGSDRIQEL 728

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
           A      GEE      S                     V  ++  HF R EF+ RI+++V
Sbjct: 729 A------GEENYAAMKS--------------------AVMEVVGYHF-RPEFINRIDDVV 761

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHE 547
            F P  + ++ ++   ++ +  K+ LD H+I++ + +  ++ +   G+D  YGAR +K  
Sbjct: 762 VFHPLGRDQIRSITDIQIRYLRKRLLD-HDIDLELSEAALDKLGEAGFDPVYGARPLKRA 820

Query: 548 VERQVVSQLA 557
           ++ Q+ + LA
Sbjct: 821 IQHQLENPLA 830


>gi|325002495|ref|ZP_08123607.1| ATP-dependent chaperone ClpB [Pseudonocardia sp. P1]
          Length = 873

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/347 (36%), Positives = 196/347 (56%), Gaps = 40/347 (11%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L  R++GQ  A+ ++S A++R   G  D++ P   FLFLG +G+GKT
Sbjct: 556 EGETAKLLRMEDELGRRVIGQAEAVRVVSDAVRRARAGIADENRPTGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 616 ELAKALAEFLFDDER-AMVRVDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVL DEV+KAHPDV   LLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA  AL 
Sbjct: 675 TVVLLDEVEKAHPDVFDTLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIADQALD 734

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            +                             ++  V  +++ HF + EFL R++++V F 
Sbjct: 735 EKA----------------------------REDAVMAVVRTHF-KPEFLNRLDDVVVFH 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
             S  EL  +V  ++     + L K  + + V D   E +  +G+D  +GAR ++  V+ 
Sbjct: 766 ALSTDELTHIVDIQVGVLGDR-LAKRRLTLEVSDAAREWLAMNGFDPVFGARPLRRLVQS 824

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVKK 597
            +  QLA       + +G  VR+ +       + SA GG   L V +
Sbjct: 825 SIGDQLARELLSGSVREGDTVRVDL-------DPSASGGTGALVVGR 864


>gi|314932748|ref|ZP_07840117.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           caprae C87]
 gi|313654429|gb|EFS18182.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           caprae C87]
          Length = 817

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/315 (40%), Positives = 190/315 (60%), Gaps = 29/315 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LE  L +R++GQ  A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESGRLLNLEDTLHNRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   + +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+G++ +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGNDYETIRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDK---HNINI-VWDIDVETILADGYDVHYGAR 542
           I+ F   SK EL  +V        KK  D+    NINI V D   E I  +GYD  YGAR
Sbjct: 708 IIVFHKLSKEELKEIVT----MMVKKLTDRLSEQNINISVTDKAKEKIAEEGYDPEYGAR 763

Query: 543 SIKHEVERQVVSQLA 557
            +   +++ V   L+
Sbjct: 764 PLIRAIQKTVEDNLS 778


>gi|302829621|ref|XP_002946377.1| hypothetical protein VOLCADRAFT_79066 [Volvox carteri f.
           nagariensis]
 gi|300268123|gb|EFJ52304.1| hypothetical protein VOLCADRAFT_79066 [Volvox carteri f.
           nagariensis]
          Length = 863

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/342 (37%), Positives = 208/342 (60%), Gaps = 30/342 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + +  E+E  +   L + L  R++GQ+ A+  ++ AI+R   G
Sbjct: 506 EADIAEIISKWT--GIPVSKLVESEREKLLHLAEELHKRVIGQDGAVEAVADAIQRSRAG 563

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  F+FLG +G+GKTELAK LA ++  + ++A +R+DMSEY EKH V++LIGA
Sbjct: 564 LSDPNRPIASFMFLGPTGVGKTELAKALAQFLF-NTEDAMVRIDMSEYMEKHSVSRLIGA 622

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+D+GGQLT+ +++ P AV+LFDEV+KAH DV  VLLQ+ D+GR+TD +G+ +  
Sbjct: 623 PPGYVGYDEGGQLTEAVRRRPYAVILFDEVEKAHADVFNVLLQILDDGRVTDSQGRVVSF 682

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+AI ++TSNL S  I + A  L K  E+ +K                     KD V+  
Sbjct: 683 KNAIIILTSNLGSANILEMA-SLLKNDEKATKTA------------------IKDLVMGQ 723

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           + + HF R EF+ RI+E + F P S+ ++ ++V  +    A++  +K     + +  V  
Sbjct: 724 V-RSHF-RPEFVNRIDEFIIFDPLSQEQIASIVRLQARRVAERLAEKKIGLQLTESAVRH 781

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
           + A GYD  YGAR +K  V+R++ + +A A     + +G FV
Sbjct: 782 LAAVGYDPVYGARPVKRAVQRELETNIAKA-----LLRGEFV 818


>gi|254237311|ref|ZP_04930634.1| hypothetical protein PACG_03381 [Pseudomonas aeruginosa C3719]
 gi|126169242|gb|EAZ54753.1| hypothetical protein PACG_03381 [Pseudomonas aeruginosa C3719]
          Length = 850

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 495 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 554

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 555 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 613

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 614 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 671

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 672 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 710

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 711 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 767

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 768 RQQLETRLATAMLKGEVKEGETVTFF 793


>gi|194337784|ref|YP_002019578.1| ATPase AAA-2 domain-containing protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194310261|gb|ACF44961.1| ATPase AAA-2 domain protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 440

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 112/298 (37%), Positives = 192/298 (64%), Gaps = 22/298 (7%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           +E  L  R++GQE A+  +S A+KR   G  DD  P+  F+FLG +G+GKTELA+ LA Y
Sbjct: 135 IEDELHKRVIGQEEAVTAVSEAVKRSRAGMGDDKRPIGSFIFLGPTGVGKTELARTLADY 194

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D ++A IR+DMSEY E H V++L+GAPPGY+G+++GGQLT+ +++ P AVVL DE++
Sbjct: 195 LF-DDEDAMIRIDMSEYMEAHTVSRLVGAPPGYVGYEEGGQLTEAVRRKPFAVVLLDEIE 253

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ + ++ Q  +++        
Sbjct: 254 KAHPDVFNILLQILDDGRLTDSKGRTVNFKNTIIIMTSNIGA-QLIQSEMEM-------- 304

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                    +G+N ++ +S   ++ + Q +LK+   + EFL RI+E++ F P ++ +L  
Sbjct: 305 --------MEGANREIMLS-GLQEKLFQ-LLKQKV-KPEFLNRIDEVILFTPLTREDLKK 353

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAA 558
           +V  + +   + A+ +H    + +  ++     G+D  +GAR +K  ++R++ ++++A
Sbjct: 354 IVLIQFDRIKEMAMRQHINLTISEPAIQWFANAGFDPAFGARPLKRVMQRKITNRVSA 411


>gi|337288558|ref|YP_004628030.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium sp. OPB45]
 gi|334902296|gb|AEH23102.1| ATP-dependent chaperone ClpB [Thermodesulfobacterium geofontis
           OPF15]
          Length = 872

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/353 (37%), Positives = 211/353 (59%), Gaps = 35/353 (9%)

Query: 229 AEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKE 288
           AED  I QI+ K+      + R  E+E  +   +E+RLK+R+VGQ+ AI+ I+ A++R  
Sbjct: 536 AED--IAQIVSKWT--GIPVHRLLESEREKLLRIEERLKERVVGQDHAISAIANALRRAR 591

Query: 289 NGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLI 347
            G  D   P+  FLF+G +G+GKTELAK LA ++  D ++A IR+DM+EY EKH V++LI
Sbjct: 592 AGLKDPRRPIGSFLFIGPTGVGKTELAKALAEFMF-DTEDAMIRIDMTEYMEKHSVSRLI 650

Query: 348 GAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTI 407
           GAPPGY+G+++GGQLT+ +++ P +V+LFDE++KAHPDV  +LLQ+ D+GRLTDGKG+T+
Sbjct: 651 GAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDGKGRTV 710

Query: 408 ECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVV 467
           + K+ I +MTSN+ S                                D+++SR   ++ V
Sbjct: 711 DFKNTIIIMTSNVGSFYFQ----------------------------DLSLSRKEVENRV 742

Query: 468 QPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV 527
             +LK  F R EFL RI+EI+ F   ++ ++  +V  ++ +  ++  +K     + D   
Sbjct: 743 FELLKSTF-RPEFLNRIDEIIVFNNLTREDIIKIVDIQIRYLNERLSEKGMFLELTDKAK 801

Query: 528 ETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
           E +   GYD  +GAR +K  +++ + + LA    + V  +G  + + V  + E
Sbjct: 802 ELLATYGYDPVFGARPLKRTIQKYIENALALKILEGVFSEGDKIIVDVNEAGE 854


>gi|163755477|ref|ZP_02162596.1| ATPase AAA-2 [Kordia algicida OT-1]
 gi|161324390|gb|EDP95720.1| ATPase AAA-2 [Kordia algicida OT-1]
          Length = 867

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 188/307 (61%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LEQ L  R+VGQE AI  +S A++R   G  D + P+  FLFLG +G+GKT
Sbjct: 550 QSEREKLLQLEQELHKRVVGQEEAIVAVSDAVRRSRAGLQDANRPIGSFLFLGMTGVGKT 609

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 610 ELAKALASYLF-DDENAMTRIDMSEYQESHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 668

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H ++
Sbjct: 669 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRIADFKNTIIIMTSNMGS-----HIIE 723

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F       S ++ + ++V             +LK+   R EFL RI+++V F 
Sbjct: 724 -----EKFKAMKDMYSATEAAKVEVL-----------GLLKQTI-RPEFLNRIDDMVMFT 766

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P S+  +  +V  +L     K L K  I +   +  ++ +   G+D  +GAR +K  ++R
Sbjct: 767 PLSQENIKEIVRLQLK-NVMKMLAKQQITLDATEEAIQYLAKQGFDPQFGARPVKRVIQR 825

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 826 KVLNELS 832


>gi|293411983|ref|ZP_06654706.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
 gi|291468754|gb|EFF11245.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
          Length = 861

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 537 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA IR+DMSE+ EKH V++L+GA
Sbjct: 595 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMIRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 748

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 749 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 805

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 806 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 859


>gi|167761662|ref|ZP_02433789.1| hypothetical protein CLOSCI_04074 [Clostridium scindens ATCC 35704]
 gi|167660805|gb|EDS04935.1| ATPase family associated with various cellular activities (AAA)
           [Clostridium scindens ATCC 35704]
          Length = 812

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 191/317 (60%), Gaps = 27/317 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           +Q+  E+E  R   LEQ L  R+VGQE A++ ++ AIKR   G  D   P+  FLFLG +
Sbjct: 489 VQKLAESESARLNKLEQTLHKRVVGQEEAVSAVAKAIKRGRVGLKDPKRPIGSFLFLGPT 548

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL+K LA  +  ++ +A IR+DMSEY EKH VAK+IG+PPGY+GHDDGGQL++++
Sbjct: 549 GVGKTELSKALAEALFGNE-DAMIRVDMSEYMEKHSVAKMIGSPPGYVGHDDGGQLSEQV 607

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G +TD +G+ ++ ++ + +MTSN      A
Sbjct: 608 RRHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAG----A 663

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           Q  +  +K G    +      K   SN+   I   F              R EFL RI+E
Sbjct: 664 QAIIDPKKLGFNAKEDAAGDYKRMKSNVMNEIKLIF--------------RPEFLNRIDE 709

Query: 487 IVYFLPFSKSELHTLV---CRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGAR 542
           I+ F P  K ++  +V   CREL   A++A D+  I + + D     I+  G D  YGAR
Sbjct: 710 ILVFHPLDKEQMRKIVSMMCREL---ARRAKDQLGIKLDIRDSVKSHIVETGTDKKYGAR 766

Query: 543 SIKHEVERQVVSQLAAA 559
            ++  V+ Q+  +LA A
Sbjct: 767 PLRRAVQNQLEDKLAEA 783


>gi|15604832|ref|NP_219616.1| Clp protease ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|385243319|ref|YP_005811165.1| Clpb [Chlamydia trachomatis D-EC]
 gi|385244199|ref|YP_005812043.1| Clpb [Chlamydia trachomatis D-LC]
 gi|54035748|sp|O84115.1|CLPB_CHLTR RecName: Full=Chaperone protein ClpB
 gi|3328511|gb|AAC67704.1| Clp Protease ATPase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748242|gb|ADI50788.1| Clpb [Chlamydia trachomatis D-EC]
 gi|297749122|gb|ADI51800.1| Clpb [Chlamydia trachomatis D-LC]
 gi|440525027|emb|CCP50278.1| protein disaggregation chaperone [Chlamydia trachomatis K/SotonK1]
 gi|440527703|emb|CCP53187.1| protein disaggregation chaperone [Chlamydia trachomatis D/SotonD5]
 gi|440528594|emb|CCP54078.1| protein disaggregation chaperone [Chlamydia trachomatis D/SotonD6]
 gi|440532166|emb|CCP57676.1| protein disaggregation chaperone [Chlamydia trachomatis G/SotonG1]
          Length = 867

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 146/418 (34%), Positives = 238/418 (56%), Gaps = 38/418 (9%)

Query: 158 TAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVAGNTEVVELLLKSGADPTV 217
           T  ++K N  E L   E+E     + N      + L Y ++    E + L     A+  +
Sbjct: 469 TGLKEKKNALENLKFAEEEAERTADYNRV----AELRYSLIPSLEEEIHL-----AEEAL 519

Query: 218 KDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAI 277
               G +  +  ++  I Q++  +      +Q+  E E  +   LE+ L++R+VGQ  AI
Sbjct: 520 NQRDGRLLQEEVDERLIAQVVANWT--GIPVQKMLEGESEKLLVLEESLEERVVGQPFAI 577

Query: 278 NIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSE 336
             +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+EA IR DM+E
Sbjct: 578 AAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALAELLF-NKEEAMIRFDMTE 636

Query: 337 YQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDE 396
           Y EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V  +LLQ+FD+
Sbjct: 637 YMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVFNILLQIFDD 696

Query: 397 GRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDV 456
           G LTD K + + CK+A+F+MTSN+ S E+A +  +                  +G+ +D 
Sbjct: 697 GILTDSKKRKVNCKNALFIMTSNIGSQELADYCTK------------------KGTIVD- 737

Query: 457 TISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDK 516
              +     VV P LK +F   EF+ RI++I+ F+P +  ++  +V  ++N  A + L++
Sbjct: 738 ---KEAVLSVVAPALKNYF-SPEFINRIDDILPFVPLTTEDIVKIVGIQMNRVALRLLER 793

Query: 517 HNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
             I++ WD  +   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I  G  V L
Sbjct: 794 -KISLTWDDSLVLFLSEQGYDSAFGARPLKRLIQQKVVTMLSKALLKGDIKPGMAVEL 850


>gi|309812358|ref|ZP_07706113.1| ATP-dependent chaperone protein ClpB [Dermacoccus sp. Ellin185]
 gi|308433663|gb|EFP57540.1| ATP-dependent chaperone protein ClpB [Dermacoccus sp. Ellin185]
          Length = 900

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 201/350 (57%), Gaps = 35/350 (10%)

Query: 213 ADPTVKDNSGHIP--SDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRI 270
           A+ T     G  P  SD     +I +++  +    A   R  E E  +   +E  L +R+
Sbjct: 527 AEATSSKAGGEAPMVSDEVTADDIAEVIASWTGIPAG--RLLEGETEKLLRMEDFLGERL 584

Query: 271 VGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAF 329
           +GQ++A+  +S A++R  +G  D D P   FLFLG +G+GKTELAK LA ++  D++ A 
Sbjct: 585 IGQKAAVEAVSDAVRRSRSGIADPDRPTGSFLFLGPTGVGKTELAKSLADFLFDDER-AM 643

Query: 330 IRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTV 389
           +R+DMSEY E+H VA+LIG+PPGY+G+++GGQLT+ +++ P +VVL DEV+KAHP+   +
Sbjct: 644 VRIDMSEYSERHAVARLIGSPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPETFDI 703

Query: 390 LLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKS 449
           LLQ+ D+GRLTDG+G+T++ ++ I VMTSNL S  +                        
Sbjct: 704 LLQVLDDGRLTDGQGRTVDFRNVILVMTSNLGSQFL------------------------ 739

Query: 450 QGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFW 509
               +D T++   K   V   ++  F+  EFL R++EIV F P ++ EL  +V  ++   
Sbjct: 740 ----VDPTMAPEAKHGAVMGAVRAQFK-PEFLNRLDEIVIFDPLTRDELSHIVELQVASL 794

Query: 510 AKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
           +K+  D+     V     E +   GYD  YGAR ++  V++++  +LA A
Sbjct: 795 SKRLADRRITLEVTPAAREWLAETGYDPAYGARPLRRLVQKEIGDRLARA 844


>gi|182413767|ref|YP_001818833.1| ATP-dependent chaperone ClpB [Opitutus terrae PB90-1]
 gi|177840981|gb|ACB75233.1| ATP-dependent chaperone ClpB [Opitutus terrae PB90-1]
          Length = 872

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 195/326 (59%), Gaps = 30/326 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   LE+ L  R+VGQ+ A+ +++ AI R  +G  D   P+  FLFLG +G+GKT
Sbjct: 556 EGEKEKLLRLEEVLHQRVVGQDEAVTLVTEAILRARSGIKDPRRPVGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D + A +R+DMSEY EKH VA++IGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 616 ELAKTLAETLF-DSEAAMVRIDMSEYMEKHSVARMIGAPPGYVGYDEGGQLTEAVRRKPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVLFDE++KAHPDV  VLLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S  +      
Sbjct: 675 AVVLFDEIEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTVIIMTSNIGSRYLL----- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              EG   S    S+ +S                 V   L++ F R EFL RI+E + F 
Sbjct: 730 ---EGVSGSSIPDSVRES-----------------VMAELRKSF-RPEFLNRIDETILFK 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +  E+ T+V   L    K+  D+  + +  D   +   A+ GYD  +GAR +K  ++R
Sbjct: 769 PLTLEEITTIVDLLLADLNKRLADRR-VTVSLDAKAKEWTAEKGYDPVFGARPLKRFLQR 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            + ++LA A     +G+ S V+  ++
Sbjct: 828 NIETKLARALISGEVGEDSAVKFTIK 853


>gi|330465005|ref|YP_004402748.1| ATP-dependent chaperone ClpB [Verrucosispora maris AB-18-032]
 gi|328807976|gb|AEB42148.1| ATP-dependent chaperone ClpB [Verrucosispora maris AB-18-032]
          Length = 863

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/330 (38%), Positives = 196/330 (59%), Gaps = 33/330 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L++R+VGQ  A+  +S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 558 EGETAKLLRMEDSLRERVVGQAEAVGAVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 618 ELAKALAGFLFDDER-AMVRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++AI ++TSNL S+ I+     
Sbjct: 677 SVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNAILILTSNLGSSVIS----- 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                  D+T++   +   V  +++ HF + EFL R+++IV F 
Sbjct: 732 -----------------------DLTLAEEQRREGVLAVVRSHF-KPEFLNRLDDIVVFA 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
                +L  +V  ++    ++  D+     V D    T LA+ GYD  YGAR ++  V+ 
Sbjct: 768 ALQGDDLRAIVDIQIARLRRRLADRRLTLDVTDA-ARTWLAEHGYDPIYGARPLRRLVQS 826

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
            +  QLA A     I  G  VR+ +  +K+
Sbjct: 827 AIGDQLAKALLAGKIRDGDTVRVDLADTKD 856


>gi|418584972|ref|ZP_13149029.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa MPAO1/P1]
 gi|418591722|ref|ZP_13155613.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa MPAO1/P2]
 gi|421515076|ref|ZP_15961762.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa PAO579]
 gi|375045304|gb|EHS37890.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa MPAO1/P1]
 gi|375049448|gb|EHS41944.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa MPAO1/P2]
 gi|404348804|gb|EJZ75141.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa PAO579]
          Length = 932

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 577 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 636

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 637 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 695

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 696 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 753

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 754 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 792

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 793 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 849

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 850 RQQLETRLATAMLKGEVKEGETVTFF 875


>gi|357040274|ref|ZP_09102063.1| ATP-dependent chaperone ClpB [Desulfotomaculum gibsoniae DSM 7213]
 gi|355356938|gb|EHG04719.1| ATP-dependent chaperone ClpB [Desulfotomaculum gibsoniae DSM 7213]
          Length = 863

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 192/326 (58%), Gaps = 29/326 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   L++ L  R+VGQ+ A+  ++ A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 557 EGEREKLIHLDEELHKRVVGQDEAVRAVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA  +  D++    RLDMSEY EKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 617 ELARALAQALFDDERN-MTRLDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  VLLQL ++GRLTDG+G+T+  ++ + +MTSNL S+EI    L 
Sbjct: 676 SVILLDEIEKAHPDVFNVLLQLLEDGRLTDGQGRTVNFQNTVVIMTSNLGSHEI----LA 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            ++ G +F K   +                     V  IL++HF R EFL R++EIV F 
Sbjct: 732 QQERGSDFDKMKTA---------------------VLGILRQHF-RPEFLNRVDEIVVFH 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             S+S++  +    L   A++      I + WD      LA  GY+  YGAR +K  +++
Sbjct: 770 ALSQSQVRQIAGLLLERLARRIYAGTGIKLTWDDSALNYLAGKGYEPAYGARPLKRVIQQ 829

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            V + L+    +  +G    V L V+
Sbjct: 830 LVETALSRMIIRGEVGPQQTVTLQVE 855


>gi|331684248|ref|ZP_08384840.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
 gi|387617905|ref|YP_006120927.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
           857C]
 gi|450191583|ref|ZP_21891282.1| protein disaggregation chaperone [Escherichia coli SEPT362]
 gi|312947166|gb|ADR27993.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
           857C]
 gi|331077863|gb|EGI49069.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
 gi|449319227|gb|EMD09281.1| protein disaggregation chaperone [Escherichia coli SEPT362]
          Length = 857

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA IR+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMIRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|107099444|ref|ZP_01363362.1| hypothetical protein PaerPA_01000456 [Pseudomonas aeruginosa PACS2]
 gi|424943121|ref|ZP_18358884.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa NCMG1179]
 gi|346059567|dbj|GAA19450.1| probable ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa NCMG1179]
          Length = 932

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 577 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 636

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 637 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 695

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 696 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 753

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 754 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 792

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 793 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 849

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 850 RQQLETRLATAMLKGEVKEGETVTFF 875


>gi|302531164|ref|ZP_07283506.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
 gi|302440059|gb|EFL11875.1| ATP-dependent chaperone ClpB [Streptomyces sp. AA4]
          Length = 864

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 192/323 (59%), Gaps = 33/323 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ+ AI +++ A++R   G  D D P   FLFLG +G+GKT
Sbjct: 557 EGETGKLLRMEEELNRRVIGQDQAIQVVADAVRRARAGVADPDRPTGSFLFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A  R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 617 ELAKALAEFLFDDER-AMQRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I ++TSNL S  IA  AL 
Sbjct: 676 TVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILILTSNLGSQAIADPALD 735

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                       R  +D V++ +++R F + EFL R+++IV F 
Sbjct: 736 ---------------------------ERQRRDAVME-VVQRQF-KPEFLNRLDDIVVFH 766

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
                +L ++V  ++   AK+ L +  +++ V D   E +  +G+D  YGAR ++  V+ 
Sbjct: 767 ALGTEQLTSIVDIQVARLAKR-LAQRRLHLEVTDGAREWLALNGFDPIYGARPLRRLVQS 825

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
            +  QLA       +  G  VR+
Sbjct: 826 AIGDQLAKQLLSGEVRDGDTVRV 848


>gi|160887374|ref|ZP_02068377.1| hypothetical protein BACOVA_05393 [Bacteroides ovatus ATCC 8483]
 gi|237722645|ref|ZP_04553126.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 2_2_4]
 gi|299148949|ref|ZP_07042011.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 3_1_23]
 gi|383114770|ref|ZP_09935532.1| chaperone ClpB [Bacteroides sp. D2]
 gi|423288294|ref|ZP_17267145.1| chaperone ClpB [Bacteroides ovatus CL02T12C04]
 gi|423295450|ref|ZP_17273577.1| chaperone ClpB [Bacteroides ovatus CL03T12C18]
 gi|156107785|gb|EDO09530.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus ATCC 8483]
 gi|229448455|gb|EEO54246.1| endopeptidase subunit Clp ATP-binding B [Bacteroides sp. 2_2_4]
 gi|298513710|gb|EFI37597.1| ATP-dependent chaperone protein ClpB [Bacteroides sp. 3_1_23]
 gi|313693519|gb|EFS30354.1| chaperone ClpB [Bacteroides sp. D2]
 gi|392671183|gb|EIY64659.1| chaperone ClpB [Bacteroides ovatus CL02T12C04]
 gi|392673178|gb|EIY66642.1| chaperone ClpB [Bacteroides ovatus CL03T12C18]
          Length = 862

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLHGSNKEEVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLNEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + +         L+  GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-GVQKMLAENGVELKLTEGALDFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|392981869|ref|YP_006480456.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa DK2]
 gi|419755939|ref|ZP_14282291.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa PADK2_CF510]
 gi|451987573|ref|ZP_21935728.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Pseudomonas
           aeruginosa 18A]
 gi|384397601|gb|EIE44012.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa PADK2_CF510]
 gi|392317374|gb|AFM62754.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa DK2]
 gi|451754723|emb|CCQ88251.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Pseudomonas
           aeruginosa 18A]
          Length = 932

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 577 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 636

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 637 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 695

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 696 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 753

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 754 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 792

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 793 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 849

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 850 RQQLETRLATAMLKGEVKEGETVTFF 875


>gi|345856613|ref|ZP_08809088.1| ATP-dependent chaperone ClpB [Desulfosporosinus sp. OT]
 gi|344330288|gb|EGW41591.1| ATP-dependent chaperone ClpB [Desulfosporosinus sp. OT]
          Length = 865

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 118/307 (38%), Positives = 191/307 (62%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E  +   +E R+ +R++GQE A+N ++ A++R   G  D + PL  FLFLG +G+GKT
Sbjct: 556 ESEMEKLVHMEDRIHERVIGQEEAVNAVADAVRRARAGLQDPNRPLGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D ++A +R+DMSEY EKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 616 ELARALAEFLF-DDEQAMVRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEVVRRKPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAH DV  VLLQL D+GRLTDG+G+ +  K+ + ++TSN+AS  I      
Sbjct: 675 SVILFDEIEKAHSDVTNVLLQLLDDGRLTDGQGRIVNFKNTVVILTSNIASPSI------ 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                ++ ++R+ S  + +      TI+             RH  R EFL R++E++ F 
Sbjct: 729 -----QDLARRSASQEEVRS-----TINEEL----------RHHFRPEFLNRLDEVIVFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
           P  +  +  +V  +L    ++ L + N+ +         LA +GYD  YGAR +K  +++
Sbjct: 769 PLERKHIGRIVEIQLGLL-RERLSERNLTLELTEQARIQLANEGYDPVYGARPLKRVIQQ 827

Query: 551 QVVSQLA 557
           ++ + LA
Sbjct: 828 RLQNPLA 834


>gi|336415800|ref|ZP_08596138.1| chaperone ClpB [Bacteroides ovatus 3_8_47FAA]
 gi|335939703|gb|EGN01575.1| chaperone ClpB [Bacteroides ovatus 3_8_47FAA]
          Length = 862

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLHGSNKEEVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLNEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + +         L+  GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-GVQKMLAENGVKLKLTEGALDFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|313111914|ref|ZP_07797704.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa 39016]
 gi|355646788|ref|ZP_09054623.1| hypothetical protein HMPREF1030_03709 [Pseudomonas sp. 2_1_26]
 gi|386068630|ref|YP_005983934.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa NCGM2.S1]
 gi|310884206|gb|EFQ42800.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa 39016]
 gi|348037189|dbj|BAK92549.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa NCGM2.S1]
 gi|354828327|gb|EHF12450.1| hypothetical protein HMPREF1030_03709 [Pseudomonas sp. 2_1_26]
          Length = 932

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 577 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 636

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 637 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 695

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 696 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 753

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 754 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 792

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 793 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 849

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 850 RQQLETRLATAMLKGEVKEGETVTFF 875


>gi|348175053|ref|ZP_08881947.1| putative Clp protease ATP-binding subunit [Saccharopolyspora
           spinosa NRRL 18395]
          Length = 860

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/322 (38%), Positives = 188/322 (58%), Gaps = 31/322 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L+  +VGQ  A+  +S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 555 EGETAKLLRMEDELERHVVGQSEAVRAVSDAVRRTRAGVADPDRPTGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A IR+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 615 ELAKALAGFLFDDER-AMIRIDMSEYAEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAH DV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA     
Sbjct: 674 SVVLFDEVEKAHSDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIA----- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                  D  +S   ++  V+ +++RHF + EFL R++++V F 
Sbjct: 729 -----------------------DPNLSEQEREEAVRSVVRRHF-KPEFLNRLDDVVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             S  EL ++V  ++   A++   +     V     + +  +G+D  +GAR ++  V+  
Sbjct: 765 SLSTDELTSIVDIQVERLAQRLAQRRLTLDVQPAARDWLALNGFDPVFGARPLRRLVQSA 824

Query: 552 VVSQLAAAHEKSVIGKGSFVRL 573
           +  QLA       I +G  +R+
Sbjct: 825 IGDQLARKLLAGEIREGDKIRV 846


>gi|416856307|ref|ZP_11911951.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa 138244]
 gi|334842182|gb|EGM20795.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa 138244]
 gi|453045838|gb|EME93556.1| ClpA/B protease ATP binding subunit [Pseudomonas aeruginosa
           PA21_ST175]
          Length = 932

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 577 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 636

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 637 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 695

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 696 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 753

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 754 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 792

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 793 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 849

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 850 RQQLETRLATAMLKGEVKEGETVTFF 875


>gi|222157291|ref|YP_002557430.1| chaperone clpB [Escherichia coli LF82]
 gi|222034296|emb|CAP77037.1| chaperone clpB [Escherichia coli LF82]
          Length = 823

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 499 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 556

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA IR+DMSE+ EKH V++L+GA
Sbjct: 557 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMIRIDMSEFMEKHSVSRLVGA 615

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 616 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 675

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 676 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 710

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 711 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 767

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 768 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 821


>gi|18400735|ref|NP_565586.1| casein lytic proteinase B4 [Arabidopsis thaliana]
 gi|75161490|sp|Q8VYJ7.1|CLPB4_ARATH RecName: Full=Chaperone protein ClpB4, mitochondrial; AltName:
           Full=ATP-dependent Clp protease ATP-binding subunit ClpB
           homolog 4; AltName: Full=Casein lytic proteinase B4;
           Flags: Precursor
 gi|17979454|gb|AAL50064.1| At2g25140/F13D4.100 [Arabidopsis thaliana]
 gi|25090122|gb|AAN72234.1| At2g25140/F13D4.100 [Arabidopsis thaliana]
 gi|330252568|gb|AEC07662.1| casein lytic proteinase B4 [Arabidopsis thaliana]
          Length = 964

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/342 (36%), Positives = 207/342 (60%), Gaps = 32/342 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           D +I +I+ K+      L   +++E  +   LE+ L  R++GQ+ A+  ++ AI+R   G
Sbjct: 618 DLDIAEIVSKWT--GIPLSNLQQSEREKLVMLEEVLHHRVIGQDMAVKSVADAIRRSRAG 675

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  F+F+G +G+GKTELAK LA Y+  + + A +R+DMSEY EKH V++L+GA
Sbjct: 676 LSDPNRPIASFMFMGPTGVGKTELAKALAGYLF-NTENAIVRVDMSEYMEKHSVSRLVGA 734

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P +VVLFDE++KAHPDV  +LLQL D+GR+TD +G+T+  
Sbjct: 735 PPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHPDVFNILLQLLDDGRITDSQGRTVSF 794

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ + +MTSN+ S+    H L+  +  E+  +    I K Q               VV+ 
Sbjct: 795 KNCVVIMTSNIGSH----HILETLRNNEDSKEAVYEIMKRQ---------------VVE- 834

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
            L R   R EF+ RI+E + F P   +E+  +V  ++    K +L++  I + +  +   
Sbjct: 835 -LARQNFRPEFMNRIDEYIVFQPLDSNEISKIVELQMR-RVKNSLEQKKIKLQYTKEAVD 892

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSF 570
           +LA  G+D +YGAR +K  +++ V +++A       I KG F
Sbjct: 893 LLAQLGFDPNYGARPVKRVIQQMVENEIAVG-----ILKGDF 929


>gi|410696680|gb|AFV75748.1| ATP-dependent chaperone ClpB [Thermus oshimai JL-2]
          Length = 854

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/308 (41%), Positives = 189/308 (61%), Gaps = 32/308 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE  L  R+VGQ+ AI  ++ AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 543 EGEREKLLRLEDELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKT 602

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +EA +R+DM+EY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 603 ELAKTLAATLF-DTEEAMVRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPY 661

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            V+LFDE++KAHPDV  +LLQ+ D+GRLTD  G+T++ ++ + ++TSNL S  I +  LQ
Sbjct: 662 TVILFDEIEKAHPDVFNLLLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILE-GLQ 720

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             QG   +    R F++      L+RHF R EFL R++EIV F 
Sbjct: 721 ------------------QGLPYEAIRDRVFRE------LQRHF-RPEFLNRLDEIVLFR 755

Query: 492 PFSKSELHTLVCREL-NFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVE 549
           P SK ++  +V  +L N  A+  L +  I++      +  LA+ GYD  +GAR +K  ++
Sbjct: 756 PLSKEQIRQIVEIQLANLRAR--LGERRISLELTEAAKDFLAERGYDPVFGARPLKRVIQ 813

Query: 550 RQVVSQLA 557
           R + + LA
Sbjct: 814 RALETPLA 821


>gi|420164359|ref|ZP_14671089.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM095]
 gi|394231748|gb|EJD77371.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           epidermidis NIHLM095]
          Length = 773

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/305 (40%), Positives = 187/305 (61%), Gaps = 23/305 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LE  L  R++GQ  A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESDRLLNLEDTLHKRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   + +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+GS+ +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGSDYETVRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NINI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKDELKEIVTMMVNKLTHR-LSEQNINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVER 550
             +++
Sbjct: 767 RAIQK 771


>gi|149190363|ref|ZP_01868636.1| ClpB protein [Vibrio shilonii AK1]
 gi|148835852|gb|EDL52816.1| ClpB protein [Vibrio shilonii AK1]
          Length = 857

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 199/350 (56%), Gaps = 31/350 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L K  +    + +  EAE+ +   +E  L  R++GQ  A+ ++S AI+R   G
Sbjct: 533 DAEIAEVLSK--QTGIPVSKMLEAEKDKLLKMEDVLHKRVIGQAEAVEVVSDAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D ++A +R+DMSE+ EKH VA+L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKTLASFMF-DSEDAMVRIDMSEFMEKHSVARLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I ++   L  EG                     I R   D     
Sbjct: 710 RNTVVIMTSNLGSSRIQENFQVLDYEG---------------------IKREVMD----- 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++  HF + EFL R++E V F P     + ++   +L    K+  D     +V D  ++ 
Sbjct: 744 VVTSHF-KPEFLNRVDESVVFHPLGAEHIKSIAGIQLQRLGKRMEDNGYHLVVADAALDY 802

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSK 579
           I   GYD  YGAR +K  +++ + + LA       +     VRL V   K
Sbjct: 803 IAKVGYDPVYGARPLKRAIQQSIENPLAKEILAGKVDPTKPVRLIVNNDK 852


>gi|399926768|ref|ZP_10784126.1| ATPase with chaperone activity ATP-binding subunit [Myroides
           injenensis M09-0166]
          Length = 863

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/299 (42%), Positives = 186/299 (62%), Gaps = 28/299 (9%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R+VGQ+ AI  IS A++R   G  D   PL  FLFLG++G+GKTELAK LA Y
Sbjct: 560 LEDELHKRVVGQDEAIEAISNAVRRSRAGLQDPKKPLGSFLFLGTTGVGKTELAKALATY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D + A  R+DMSEY E+H V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++
Sbjct: 620 LF-DDENAMTRIDMSEYGERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S     H +Q     E+F 
Sbjct: 679 KAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGS-----HIIQ-----EKFD 728

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
             T  + K+         S   K+ V+  +  +   R EFL RI+E+V F P SK ++  
Sbjct: 729 S-TDDVYKA---------SEEAKEGVLNEL--KQLVRPEFLNRIDEVVMFTPLSKKDILE 776

Query: 501 LVCREL-NFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L N +  K L   NI++    +   +LA  GY+  +GAR +K  +++ V++ L+
Sbjct: 777 IVDIQLHNVF--KMLAHQNIHMDATPEARELLAKRGYEPQFGARPVKRVIQKDVLNTLS 833


>gi|386056527|ref|YP_005973049.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa M18]
 gi|347302833|gb|AEO72947.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa M18]
          Length = 932

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 195/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 577 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 636

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 637 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 695

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 696 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 753

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF++    + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 754 ---QAGEFAQPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 792

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 793 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 849

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 850 RQQLETRLATAMLKGEVKEGETVTFF 875


>gi|158425824|ref|YP_001527116.1| ATPase AAA [Azorhizobium caulinodans ORS 571]
 gi|158332713|dbj|BAF90198.1| AAA ATPase [Azorhizobium caulinodans ORS 571]
          Length = 879

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 183/307 (59%), Gaps = 18/307 (5%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +EQ L  R++GQ  A+  +S A++R   G  D + P+  FLF+G +G+GKT
Sbjct: 553 EGERDKLLRMEQELAKRVIGQSEAVAAVSTAVRRARAGLQDPNRPIGSFLFIGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D + A +RLDMSEY EKH V++LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELTKALASFLF-DDETAMVRLDMSEYMEKHSVSRLIGAPPGYVGYEEGGALTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAH DV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL +  +A     
Sbjct: 672 QVVLFDEVEKAHQDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLA----- 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                     R P      G + +  +S      +V   ++RHF R EF+ RI+EIV F 
Sbjct: 727 --------DPRQPVGFGIPGHDGEKVVSDEEAYELVMQAVRRHF-RPEFINRIDEIVMFH 777

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              K ++  +V  +L   A K L+   I +    +    LAD GYD  YGAR +K  +++
Sbjct: 778 RLRKDQMGGIVEIQLKRLA-KLLEDRKITLDLTPEARAFLADKGYDPAYGARPLKRTIQK 836

Query: 551 QVVSQLA 557
            V   LA
Sbjct: 837 LVQDPLA 843


>gi|420374600|ref|ZP_14874564.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
 gi|391316060|gb|EIQ73544.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
          Length = 820

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/347 (36%), Positives = 207/347 (59%), Gaps = 33/347 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E E  +   +EQ L  R++GQ  A+  +S AI+R   G
Sbjct: 496 DAEIAEVLARWT--GIPVARMLEGEREKLLRMEQDLHSRVIGQNEAVEAVSNAIRRSRAG 553

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 554 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMVRIDMSEFMEKHSVSRLVGA 612

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 613 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 672

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD +   H KD V+  
Sbjct: 673 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYS---HMKDMVL-G 706

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           ++ ++F R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 707 VVSQNF-RPEFINRIDEVVVFHPLGEKHIASIATIQLQRLYKR-LEERGYEIHISDEALK 764

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V
Sbjct: 765 LLSVNGYDPVYGARPLKRAIQQQIENPLAQQILSGELIPGKTIRLEV 811


>gi|423279678|ref|ZP_17258591.1| chaperone ClpB [Bacteroides fragilis HMW 610]
 gi|404584666|gb|EKA89310.1| chaperone ClpB [Bacteroides fragilis HMW 610]
          Length = 862

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 117/298 (39%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIAAVSDAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K   +N D  +    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLNSANKDEVVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + + + + D  ++ +   GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-SVQKMLAGNGVELKLTDAALDFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|431793874|ref|YP_007220779.1| ATP-dependent chaperone ClpB [Desulfitobacterium dichloroeliminans
           LMG P-21439]
 gi|430784100|gb|AGA69383.1| ATP-dependent chaperone ClpB [Desulfitobacterium dichloroeliminans
           LMG P-21439]
          Length = 866

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/331 (37%), Positives = 194/331 (58%), Gaps = 30/331 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E  +   +E+R+ +R++GQE A+  ++ A++R   G  D + PL  FLFLG +G+GKT
Sbjct: 556 ESEMDKLVHMEERIHERVIGQEEAVKAVADAVRRARAGLQDPNRPLGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D  +  +R+DMSEY EKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 616 ELAKALAEFLF-DDDQGIVRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRKPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAH DV  VLLQL D+GRLTDG+G+ +  K+ + ++TSN+AS  I +    
Sbjct: 675 SVVLFDEVEKAHGDVFNVLLQLLDDGRLTDGQGRVVNFKNTVVILTSNIASPLIQEM--- 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                        + S +    L   +S   K          HF R EFL R++E++ F 
Sbjct: 732 -------------TASGASQEVLRSKVSEELK----------HFFRPEFLNRLDEMIVFH 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P  +  + ++V  +L+   +K L    I + + D     I+  GYD  YGAR +K  ++ 
Sbjct: 769 PLGQEHIRSIVQIQLDLL-RKYLAPRKITLNLSDAAQNIIVQQGYDPIYGARPLKRVIQH 827

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
            + + LA    +  I +G+ V + V    E+
Sbjct: 828 NLQNPLAMRILQGTIHEGAHVMVDVNSRGEL 858


>gi|313145690|ref|ZP_07807883.1| chaperone clpB [Bacteroides fragilis 3_1_12]
 gi|313134457|gb|EFR51817.1| chaperone clpB [Bacteroides fragilis 3_1_12]
          Length = 862

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 117/298 (39%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIAAVSDAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K   +N D  +    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLNSANKDEVVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + + + + D  ++ +   GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-SVQKMLAGNGVELKLTDAALDFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|288941086|ref|YP_003443326.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
 gi|288896458|gb|ADC62294.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
          Length = 865

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 189/320 (59%), Gaps = 29/320 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  ++ R+VGQ  A+  +S AI+R   G +D   P+  FLFLG +G+GKT
Sbjct: 553 EGERDKLLRMESEIEQRVVGQNEAVRAVSDAIRRSRAGLSDPGRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKALAAFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +++L DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++++ VMTSNL S+ I Q A  
Sbjct: 672 SLILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNSVIVMTSNLGSDIIQQRA-- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GE                         K+ V++ +  RH  R EF+ R++EIV F 
Sbjct: 730 ----GEAHYA-------------------EMKEAVMESV--RHAFRPEFINRLDEIVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  ++++  +   +L +  ++  ++     V D  ++ + A G+D  YGAR +K  +  Q
Sbjct: 765 PLQQAQIRAIARIQLGYLQQRLAERDMKLEVSDAALDHLGAAGFDPVYGARPLKRAIRAQ 824

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           + + LA        G G  +
Sbjct: 825 LENPLAQQILSGKFGPGDLI 844


>gi|75674787|ref|YP_317208.1| ATPase AAA [Nitrobacter winogradskyi Nb-255]
 gi|74419657|gb|ABA03856.1| AAA ATPase [Nitrobacter winogradskyi Nb-255]
          Length = 891

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/328 (39%), Positives = 195/328 (59%), Gaps = 35/328 (10%)

Query: 233 NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWT 292
           +I Q++ ++     D   E E E+  +  +E+ L  R+VGQ  A+  +S A++R   G  
Sbjct: 548 SIAQVVSRWTGVPVDKMLEGEKEKLLR--MEESLAARVVGQGEAVRAVSTAVRRARAGLQ 605

Query: 293 DDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
           D + P+  F+FLG +G+GKTEL K LA Y+  D + A +R+DMSEY EKH VA+LIGAPP
Sbjct: 606 DPNRPMGSFMFLGPTGVGKTELTKALAAYLF-DDETAMVRIDMSEYMEKHSVARLIGAPP 664

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++
Sbjct: 665 GYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRN 724

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPIL 471
            + +MTSNL S  +         EGE+                        ++ V++ ++
Sbjct: 725 TLIIMTSNLGSEFLVNQ-----PEGEDTGA--------------------VREQVME-MV 758

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWA-KKALDKHNINIVWDIDVETI 530
           + HF R EFL R++EI+ F    KSE+  +V  E+ F   +K L+   I +  D      
Sbjct: 759 RGHF-RPEFLNRVDEIILFHRLQKSEMGRIV--EIQFSRLQKLLEDRKIVLDLDSAARDR 815

Query: 531 LAD-GYDVHYGARSIKHEVERQVVSQLA 557
           LA+ G+D  YGAR +K  ++R V   LA
Sbjct: 816 LAEKGWDPAYGARPLKRVIQRSVQDPLA 843


>gi|120436611|ref|YP_862297.1| chaperone ClpB [Gramella forsetii KT0803]
 gi|117578761|emb|CAL67230.1| chaperone ClpB [Gramella forsetii KT0803]
          Length = 868

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 118/297 (39%), Positives = 185/297 (62%), Gaps = 24/297 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R+VGQ+ AI  +S A++R   G  D + P+  FLFLG++G+GKTELAK LA Y
Sbjct: 560 LEDDLHKRVVGQQEAIIAVSDAVRRSRAGLQDQNRPIGSFLFLGTTGVGKTELAKALAEY 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++
Sbjct: 620 LF-DDESAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q + E  +  
Sbjct: 679 KAHPDTFNILLQVLDEGRLTDNKGRVADFKNTIIIMTSNMGS-----HIIQEKFENVKDP 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                 +K++                V  +LK+   R EF+ RI++IV F P +++++  
Sbjct: 734 DTAMEAAKTE----------------VLGLLKQSV-RPEFINRIDDIVMFSPLTQNDIKQ 776

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L    K   ++H +    D  +E +   G+D  +GAR +K  V+++V+++L+
Sbjct: 777 IVGLQLKGVKKMLANQHMVLDATDEAIEYLSVKGFDPQFGARPVKRVVQKEVLNKLS 833


>gi|421869953|ref|ZP_16301590.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Burkholderia
           cenocepacia H111]
 gi|358070560|emb|CCE52468.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Burkholderia
           cenocepacia H111]
          Length = 942

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 192/305 (62%), Gaps = 25/305 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R+VGQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVVGQSDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAETVFGDE-QAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREELMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ D  V+ +   GY   +GAR +K ++ + +
Sbjct: 791 LSKDNIRSIVQIQLDRVVRTAAAQDITLVMGDSLVDHLTEVGYQPEFGARELKRQIRQTI 850

Query: 553 VSQLA 557
            ++LA
Sbjct: 851 ETRLA 855


>gi|293370802|ref|ZP_06617348.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CMC 3f]
 gi|292634162|gb|EFF52705.1| ATP-dependent chaperone protein ClpB [Bacteroides ovatus SD CMC 3f]
          Length = 862

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  ++ A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +  I    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLHGSNKEEVIEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLNEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L ++ + +         L+  GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVLLQIK-GVQKMLAENGVELKLTEGALDFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|398827700|ref|ZP_10585906.1| ATP-dependent chaperone ClpB [Phyllobacterium sp. YR531]
 gi|398219249|gb|EJN05739.1| ATP-dependent chaperone ClpB [Phyllobacterium sp. YR531]
          Length = 870

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 150/423 (35%), Positives = 226/423 (53%), Gaps = 50/423 (11%)

Query: 160 AEKKMNPFEVLLKRE-DEFNDVLNP---NMTFLGFSALHYGVVAGNTEVVELLLKSGADP 215
           AEK+       LKR+ D+  + L     N  F     L YG +         L K  A+ 
Sbjct: 465 AEKQKLGLAADLKRQLDDARNALASAQRNGEFQKAGELAYGTIPQ-------LEKQLAES 517

Query: 216 TVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQES 275
              D S  +  +     +I Q++ ++     D  R  E E  +   +E  L  R+VGQ  
Sbjct: 518 EKNDGSTSMVEEIVTPDHIAQVVSRWTGIPVD--RMLEGERDKLLRMEDELAKRVVGQGE 575

Query: 276 AINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDM 334
           A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  D+  A +R+DM
Sbjct: 576 AVQAVSRAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKSLASFLFSDET-AMVRIDM 634

Query: 335 SEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLF 394
           SEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P  V+LFDE++KAHPDV  VLLQ+ 
Sbjct: 635 SEYMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVL 694

Query: 395 DEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNL 454
           D+GRLTDG+G+T++ ++ + +MTSNL +  +                       S G + 
Sbjct: 695 DDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLV----------------------SLGEDQ 732

Query: 455 DVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKAL 514
           DV   R      V  ++K  F R EFL R++E++ F    + E+ T+V  +L    +  L
Sbjct: 733 DVEDVRED----VMNVVKASF-RPEFLNRVDEVILFHRLKRKEMGTIVAIQLQRL-QSLL 786

Query: 515 DKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGK---GSF 570
               I +  D D    LAD GYD  YGAR +K  +++QV   LA   EK ++G+   GS 
Sbjct: 787 ADRKIVLKIDDDATNWLADKGYDPAYGARPLKRVIQKQVQDPLA---EKILLGEILDGST 843

Query: 571 VRL 573
           V++
Sbjct: 844 VKI 846


>gi|398866596|ref|ZP_10622084.1| ATPase with chaperone activity, ATP-binding subunit [Pseudomonas
           sp. GM78]
 gi|398944559|ref|ZP_10671338.1| ATPase with chaperone activity, ATP-binding subunit [Pseudomonas
           sp. GM41(2012)]
 gi|398158132|gb|EJM46493.1| ATPase with chaperone activity, ATP-binding subunit [Pseudomonas
           sp. GM41(2012)]
 gi|398240301|gb|EJN25987.1| ATPase with chaperone activity, ATP-binding subunit [Pseudomonas
           sp. GM78]
          Length = 920

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 202/332 (60%), Gaps = 29/332 (8%)

Query: 255 EERRK-YPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E  L+DR+VGQE A+  +S A++    G    + P+  FLFLG +G+GKTE
Sbjct: 581 EERQKLMNMEDTLRDRLVGQEDAVRAVSDAVRLSRAGLGQANRPIATFLFLGPTGVGKTE 640

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ ++ IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 641 LAKALAETVFGDE-QSIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRKPYS 699

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++ L+ 
Sbjct: 700 VILLDEIEKAHPDVNNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGSPVIMEN-LE- 757

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
           R E E  + +                    +D ++  +LK HF R EFL RI++I+ F  
Sbjct: 758 RPEDERLTDKA------------------LRDELMG-VLKGHF-RPEFLNRIDDIIVFHA 797

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQ 551
            ++  + ++V  +L+   + A    NI + + D  ++ +   GY   +GAR +K ++ + 
Sbjct: 798 LTRDNIRSIVSIQLDRVIRTA-SAQNITVKIADSLIDHLADVGYQPEFGARELKRQIRQA 856

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
           V ++LA       +  G  V L   + KE SE
Sbjct: 857 VETRLAKEMLADKLQAGDSVEL--GYDKERSE 886


>gi|432466777|ref|ZP_19708864.1| chaperone ClpB [Escherichia coli KTE205]
 gi|432582290|ref|ZP_19818703.1| chaperone ClpB [Escherichia coli KTE57]
 gi|433073818|ref|ZP_20260468.1| chaperone ClpB [Escherichia coli KTE129]
 gi|433121149|ref|ZP_20306817.1| chaperone ClpB [Escherichia coli KTE157]
 gi|433184293|ref|ZP_20368537.1| chaperone ClpB [Escherichia coli KTE85]
 gi|430993060|gb|ELD09419.1| chaperone ClpB [Escherichia coli KTE205]
 gi|431121701|gb|ELE24580.1| chaperone ClpB [Escherichia coli KTE57]
 gi|431586710|gb|ELI58097.1| chaperone ClpB [Escherichia coli KTE129]
 gi|431641475|gb|ELJ09213.1| chaperone ClpB [Escherichia coli KTE157]
 gi|431705027|gb|ELJ69647.1| chaperone ClpB [Escherichia coli KTE85]
          Length = 857

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLDV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|428223047|ref|YP_007107217.1| ATPase family protein associated with various cellular activities
           (AAA) [Synechococcus sp. PCC 7502]
 gi|427996387|gb|AFY75082.1| ATPase family protein associated with various cellular activities
           (AAA) [Synechococcus sp. PCC 7502]
          Length = 885

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 189/307 (61%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E ++   LE  L +R+VGQE A+  +++AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 579 ESERQKLLKLESHLHERVVGQEEAVTSVASAIRRARAGMQDPNRPIGSFLFLGPTGVGKT 638

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D   A IR+DMSEY EKH V++L+GAPPGY+G+++GGQL++ +++ P 
Sbjct: 639 ELARTLAQFMF-DTDTAMIRIDMSEYMEKHSVSRLLGAPPGYVGYEEGGQLSEAVRRHPY 697

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQ+ D+GR+TD +G+ I+CK+ + +MTSN+ S  I   A  
Sbjct: 698 SVILFDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDCKNTVIIMTSNIGSEYILDIADN 757

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             K  EE  +R                        V   L+++F R EFL RI+E V F 
Sbjct: 758 DAKY-EEVRRR------------------------VTDALRQNF-RPEFLNRIDETVIFQ 791

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             SKSE+  +   ++    ++  D   +++V   +    +A+ GYD  YGAR +K  ++R
Sbjct: 792 ALSKSEIKAIALLQIKRIEQRLAD-QKLSLVLSPEARDYIAEIGYDPIYGARPLKRAIQR 850

Query: 551 QVVSQLA 557
           ++ + +A
Sbjct: 851 EIENPIA 857


>gi|383785544|ref|YP_005470114.1| chaperone clpB [Leptospirillum ferrooxidans C2-3]
 gi|383084457|dbj|BAM07984.1| chaperone clpB [Leptospirillum ferrooxidans C2-3]
          Length = 863

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 193/325 (59%), Gaps = 30/325 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  E E ++   +E+RL  R+VGQ+ A+  +S AI+R   G  D + PL  F FLG +
Sbjct: 552 VSRMLEGEVQKLLQMEERLGSRVVGQQEALAAVSNAIRRARAGIQDPNRPLGSFFFLGPT 611

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA ++  D  +A IR+DMSEY EKH V++L+GAPPGY+G+++GGQLT+ +
Sbjct: 612 GVGKTELAKALAEFLF-DSDQAMIRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTESI 670

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+ ++ ++ + +MTSN+ S+ I 
Sbjct: 671 RRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRVVDFRNTVIIMTSNVGSDIIR 730

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           +                       G + D T     K  V++ IL + F R EFL RI+E
Sbjct: 731 ERV---------------------GLDADET-----KQEVLE-ILSKTF-RPEFLNRIDE 762

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           I+ F P  + E+  +V  +L+    +  D+     +     E + A GYD  YGAR +K 
Sbjct: 763 IIVFHPLLRHEIGRIVRIQLDGLNARLKDQGIQLEISPAAEEELTAVGYDPVYGARPLKR 822

Query: 547 EVERQVVSQLAAAHEKSVIGKGSFV 571
            V+  +++ LA       I +GS V
Sbjct: 823 AVQSLILNPLAQKILSGGISQGSVV 847


>gi|283769680|ref|ZP_06342572.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus H19]
 gi|283459827|gb|EFC06917.1| ATP-dependent Clp protease ATP-binding subunit clpC [Staphylococcus
           aureus subsp. aureus H19]
          Length = 818

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 189/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NI  IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNIKIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|410620447|ref|ZP_11331318.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           polaris LMG 21857]
 gi|410159932|dbj|GAC35456.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           polaris LMG 21857]
          Length = 858

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 118/307 (38%), Positives = 191/307 (62%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E  L +R+VGQ  A+N +S AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 555 EGEKDKLMSMESALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 615 ELCKTLAHFLF-DTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  +LLQ+ D+GRLTDG+G+T++ K+ + +MTSNL S+ I     Q
Sbjct: 674 SVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDII-----Q 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            +    ++ K   S+       LDV +S HF              R EFL R++E V F 
Sbjct: 729 EQHSENDYEKMKQSV-------LDV-LSTHF--------------RPEFLNRVDETVVFH 766

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P    ++ ++  ++L F  +K L++  I + + D  ++ +   G+D  YGAR +K  ++ 
Sbjct: 767 PLGLEQITSIASKQLQFL-RKRLEEKGIGLELTDAALQKLAEAGFDPVYGARPLKRAIQM 825

Query: 551 QVVSQLA 557
           ++ + LA
Sbjct: 826 EIENPLA 832


>gi|451981814|ref|ZP_21930156.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
 gi|451760951|emb|CCQ91421.1| Chaperone protein ClpB [Nitrospina gracilis 3/211]
          Length = 875

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/323 (38%), Positives = 202/323 (62%), Gaps = 18/323 (5%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E++R   +E +L  ++VGQ+ A+  +S AI+R  +G  D + P+  FLFLG +G+GKT
Sbjct: 557 QSEKKRLLAMESQLHRKVVGQDEAVTAVSNAIRRSRSGIQDPNRPIGTFLFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           +LA+ LA ++  D ++A IR+DMSEY EKH  A+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 QLARTLAEFLF-DDEQAMIRVDMSEYMEKHSTARLIGAPPGYVGYEEGGYLTEHVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  + LQ+ DEGRLTDG GKT++ K+ + +MTSN+A   I +  +Q
Sbjct: 676 SVVLFDEIEKAHPDVFNLFLQILDEGRLTDGHGKTVDFKNTVVLMTSNIAGKMIQETGMQ 735

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           + +           + K+  ++ D    R      V+  L++HF R EFL RI++IV F 
Sbjct: 736 MGQ-----------LEKAGKADWDREYER--VQEAVRQELRQHF-RPEFLNRIDDIVIFR 781

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             S+ ++  +V  ++    K+  D+ N+ +    + +  LA+ GYD  +GAR +K  +++
Sbjct: 782 NLSREQIKNIVDIQIEDLHKRLADR-NMALELSEEAKAWLAEKGYDPVFGARPLKRVIQK 840

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
            V   L+       I +G  +R+
Sbjct: 841 YVQDPLSLELLDEKIQEGDTIRV 863


>gi|432802779|ref|ZP_20036748.1| chaperone ClpB [Escherichia coli KTE84]
 gi|431347921|gb|ELG34798.1| chaperone ClpB [Escherichia coli KTE84]
          Length = 857

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 QLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|386398643|ref|ZP_10083421.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM1253]
 gi|385739269|gb|EIG59465.1| ATP-dependent chaperone ClpB [Bradyrhizobium sp. WSM1253]
          Length = 879

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/353 (37%), Positives = 203/353 (57%), Gaps = 35/353 (9%)

Query: 208 LLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLK 267
           L K  A+   K+NSG +  +     +I Q++ ++     D  +  E E+ +   +E  L 
Sbjct: 511 LEKQLAEIEAKENSGEMMEEAVTANHIAQVVSRWTGVPVD--KMLEGEKDKLLRMEDSLG 568

Query: 268 DRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKK 326
            R+VGQ  A+  ++ A++R   G  D + P   F+FLG +G+GKTEL K LA Y+  D+ 
Sbjct: 569 KRVVGQAEAVRAVATAVRRSRAGLQDPNRPTGSFMFLGPTGVGKTELTKALAEYLFNDET 628

Query: 327 EAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDV 386
            A +RLDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P  VVLFDE++KAHPDV
Sbjct: 629 -AMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDV 687

Query: 387 LTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSI 446
             VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  +         EGE+ S      
Sbjct: 688 FNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSEFLVNQP-----EGEDTSA----- 737

Query: 447 SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCREL 506
                           ++ V+  +++ HF R EFL R++EI+ F    +SE+  +V  E+
Sbjct: 738 ---------------VREQVMG-MVRGHF-RPEFLNRVDEIILFHRLQRSEMGRIV--EI 778

Query: 507 NFWA-KKALDKHNINIVWD-IDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
            F   +K L    I +  D    + + A G+D  YGAR +K  ++R V   LA
Sbjct: 779 QFARLQKLLTDRKIVLTLDAAGRDWLAAKGWDPAYGARPLKRVIQRHVQDPLA 831


>gi|297825543|ref|XP_002880654.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297326493|gb|EFH56913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 972

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/343 (37%), Positives = 207/343 (60%), Gaps = 34/343 (9%)

Query: 231 DANIKQILQKYAE-KYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKEN 289
           D +I +I+ K+     ++LQ   ++E  +   LEQ L  R+VGQ+ A+  ++ AI+R   
Sbjct: 626 DLDIAEIVSKWTGIPLSNLQ---QSEREKLVMLEQVLHHRVVGQDMAVKSVADAIRRSRA 682

Query: 290 GWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIG 348
           G +D + P+  F+F+G +G+GKTELAK LA Y+  + + A +R+DMSEY EK  V++L+G
Sbjct: 683 GLSDPNRPIASFMFMGPTGVGKTELAKALAGYLF-NTENAIVRIDMSEYMEKFSVSRLVG 741

Query: 349 APPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIE 408
           APPGY+G+++GGQLT+ +++ P +VVLFDE++KAHPDV  +LLQL D+GR+TD +G+T+ 
Sbjct: 742 APPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHPDVFNILLQLLDDGRITDSQGRTVS 801

Query: 409 CKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQ 468
            K+ + +MTSN+ S+    H L+  +  E+  +    I K Q               VV+
Sbjct: 802 FKNCVVIMTSNIGSH----HILETLRNNEDSKEAVYEIMKRQ---------------VVE 842

Query: 469 PILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVE 528
             L R   R EF+ RI+E + F P    E+  +V  ++    K  L++  IN+ +  +  
Sbjct: 843 --LARQNFRPEFMNRIDEYIVFQPLDSKEISKIVELQMR-RVKSRLEQKKINLQYTKEAV 899

Query: 529 TILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSF 570
            +LA  G+D +YGAR +K  +++ V +++A       + KG F
Sbjct: 900 DLLAQLGFDPNYGARPVKRVIQQMVENEIAVG-----VLKGDF 937


>gi|255536407|ref|YP_003096778.1| ClpB protein [Flavobacteriaceae bacterium 3519-10]
 gi|255342603|gb|ACU08716.1| ClpB protein [Flavobacteriaceae bacterium 3519-10]
          Length = 863

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 189/307 (61%), Gaps = 24/307 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQ+ AI  I+ AI+R   G  D+  P+  FLFLG++G+GKT
Sbjct: 549 QSEREKLLHLEDELHKRVVGQDEAIESIADAIRRNRAGLNDEKKPIGSFLFLGTTGVGKT 608

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D+     R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 609 ELAKALAEYLFDDENN-MTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 667

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV   LLQ+ D+GRLTD KG+ +  K++I +MTSNL S     H +Q
Sbjct: 668 SVVLLDEIEKAHPDVFNTLLQVLDDGRLTDNKGRVVNFKNSIIIMTSNLGS-----HLIQ 722

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              E       T  ++K+             K+ V    L R   R EFL RI+E V F 
Sbjct: 723 ENFENITDDNVTEVVAKT-------------KEEVFA--LLRQTLRPEFLNRIDETVLFQ 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
           P ++ E+  +V  +L  +  K L++  I +    D V+ I+  GYD  +GAR +K  +++
Sbjct: 768 PLNRKEIGKIVHYQLRGF-NKMLERRGIFMTATEDAVDYIMNKGYDPSFGARPLKRVLQQ 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNKLS 833


>gi|402831624|ref|ZP_10880302.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. CM59]
 gi|402281519|gb|EJU30151.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. CM59]
          Length = 861

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/307 (42%), Positives = 187/307 (60%), Gaps = 30/307 (9%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKTELAK LA Y+  D + 
Sbjct: 565 RVVGQEEAIAAVSDAIRRSRAGLQDPKKPIGSFLFLGTTGVGKTELAKALAEYLF-DDEN 623

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++KAHPD  
Sbjct: 624 AMTRIDMSEYQEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVVLLDEIEKAHPDTF 683

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S     H +Q     E F K      
Sbjct: 684 NILLQVLDEGRLTDNKGRTADFKNTIIIMTSNIGS-----HLIQ-----ESFEKIK---- 729

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                  +V  +       V  +LK+   R EF+ RI++IV F P +K+++  +V  +L 
Sbjct: 730 -------NVEEATEKAKEEVLQLLKQTV-RPEFINRIDDIVMFAPLTKADIKQIVRLQLG 781

Query: 508 FWAKKALDKHNINIVWDIDVETI--LAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSV 564
              K    +   NIV +   E I  LA+ GYD  +GAR +K  ++++V++ L+    K  
Sbjct: 782 GIIKLVARE---NIVLEATPEAIDYLAERGYDPQFGARPVKRVLQKEVMNALSKEILKGN 838

Query: 565 IGKGSFV 571
           I  GS +
Sbjct: 839 IKAGSLI 845


>gi|387927404|ref|ZP_10130083.1| ATPase [Bacillus methanolicus PB1]
 gi|387589548|gb|EIJ81868.1| ATPase [Bacillus methanolicus PB1]
          Length = 866

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/345 (36%), Positives = 202/345 (58%), Gaps = 38/345 (11%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE  L +R++GQ+ A+N++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLESILHERVIGQDEAVNLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK L+  +  D ++  IRLDMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLSQSLF-DSEDHMIRLDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRNPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S+ + +    
Sbjct: 678 SVILLDEIEKAHPEVFNILLQVLDDGRITDSQGRTVDFKNTVIIMTSNIGSSFLLER--- 734

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                               +N++  I    K+ V+   L+ HF R EFL R++EI+ F 
Sbjct: 735 --------------------TNIEGEIPEETKNKVLSQ-LRSHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P    E+  +V + ++   K+  DK  + ++     E I  +G+D  YGAR +K  ++  
Sbjct: 773 PLKLEEIKQIVTKLISDLQKRLNDKEILLVITKEATEYIAENGFDPIYGARPLKRFIQHH 832

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGIIKLKVK 596
           V ++LA    K  I + + V + V+            G I LKVK
Sbjct: 833 VETKLAREIVKGSIKEQTIVEIGVE-----------NGEITLKVK 866


>gi|373110450|ref|ZP_09524719.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CCUG 10230]
 gi|371643092|gb|EHO08650.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CCUG 10230]
          Length = 862

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 187/307 (60%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  IS A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLHLEDELHKRVVGQEEAIEAISDAVRRSRAGLQDPKKPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEY E+H V++L+GAPPGY+G+D+ GQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYGERHSVSRLVGAPPGYVGYDEDGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q
Sbjct: 670 SVVLLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS-----HIIQ 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E+F   T     S+ + ++V      K  V          R EFL RI+E+V F 
Sbjct: 725 -----EKFENATNMEQASEDAKVEVL--NELKQQV----------RPEFLNRIDEVVMFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P SK+ +  +V  +L     K L + NI++    + +  LA  G+D  +GAR +K  V++
Sbjct: 768 PLSKNNILQIVDIQLQ-SVFKMLAQQNIHMEATAEAKEFLATKGFDPEFGARPVKRVVQK 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNRLS 833


>gi|187733901|ref|YP_001881380.1| protein disaggregation chaperone [Shigella boydii CDC 3083-94]
 gi|187430893|gb|ACD10167.1| ATP-dependent chaperone protein ClpB [Shigella boydii CDC 3083-94]
          Length = 857

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/353 (35%), Positives = 205/353 (58%), Gaps = 31/353 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+  ++     + D  ++ 
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIYISDEALKL 802

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
           +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 803 LSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|186684542|ref|YP_001867738.1| ATPase [Nostoc punctiforme PCC 73102]
 gi|186466994|gb|ACC82795.1| ATPase AAA-2 domain protein [Nostoc punctiforme PCC 73102]
          Length = 872

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/349 (35%), Positives = 204/349 (58%), Gaps = 34/349 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + +  E+E+ +   LE  L  R++GQE A+  ++ AI+R   G
Sbjct: 539 EADIAEIISKWT--GIPISKLVESEKEKLLHLEDELHHRVIGQEEAVTAVADAIQRSRAG 596

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  F+FLG +G+GKTELAK LA Y+  D ++A +R+DMSEY EKH V++LIGA
Sbjct: 597 LADPNRPIASFIFLGPTGVGKTELAKALAGYMF-DSEDALVRIDMSEYMEKHAVSRLIGA 655

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P +V+LFDE++KAHPDV  + LQ+ D+GR+TD +G  ++ 
Sbjct: 656 PPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHKVDF 715

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+AI +MTSN+ S  I                            LDV       D + + 
Sbjct: 716 KNAIIIMTSNIGSQYI----------------------------LDVAGDNAHYDEMRRR 747

Query: 470 ILK--RHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV 527
           +++  R+  R EFL RI+EI+ F    K EL  +V  ++    ++  D+     + D  +
Sbjct: 748 VMEAMRNSFRPEFLNRIDEIIIFHGLDKKELRQIVLLQVQRLRQRLADRKISLKLSDAAL 807

Query: 528 ETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + +   GYD  YGAR +K  ++R++ +Q+A A  +     G+ + + VQ
Sbjct: 808 DFLAEVGYDPVYGARPLKRAIQRELETQIAKAILRGEFTDGNTIFVDVQ 856


>gi|377579335|ref|ZP_09808305.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
 gi|377539445|dbj|GAB53470.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
          Length = 857

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 211/354 (59%), Gaps = 31/354 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ+ A+  +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F             +LD +   H KD V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERF------------GDLDYS---HMKDMVL-T 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ ++F R EF+ RI+E+V F P  +  + ++   +L    K+  ++     + D  +  
Sbjct: 744 VVSQNF-RPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYKRLEERGYQVQMSDEALRL 802

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
           +  +GYD  YGAR +K  +++Q+ + LA       +  G  + L V+ ++ V++
Sbjct: 803 LGENGYDPVYGARPLKRAIQQQIENPLAQQILSGELIPGKTIELVVKDARIVAQ 856


>gi|423130481|ref|ZP_17118156.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CCUG 12901]
 gi|371645064|gb|EHO10592.1| ATP-dependent chaperone ClpB [Myroides odoratimimus CCUG 12901]
          Length = 862

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/291 (42%), Positives = 181/291 (62%), Gaps = 26/291 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQE AI  IS A++R   G  D   P+  FLFLG++G+GKTELAK LA Y+  D + 
Sbjct: 567 RVVGQEEAIEAISDAVRRSRAGLQDPKKPIGSFLFLGTTGVGKTELAKALAEYLF-DDEN 625

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A  R+DMSEY E+H V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++KAHPD  
Sbjct: 626 AMTRIDMSEYGERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDTF 685

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S     H +Q     E+F   T    
Sbjct: 686 NILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS-----HIIQ-----EKFENATNMEQ 735

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
            S+ + ++V      K  V          R EFL RI+E+V F P SK+ +  +V  +L 
Sbjct: 736 ASEDAKVEVL--NELKQQV----------RPEFLNRIDEVVMFTPLSKNNILQIVDIQLQ 783

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
               K L + NI++    + +  LA  G+D  +GAR +K  V+++V+++L+
Sbjct: 784 -SVFKMLAQQNIHMEATAEAKEFLATKGFDPEFGARPVKRVVQKEVLNRLS 833


>gi|213963635|ref|ZP_03391887.1| ATP-dependent chaperone ClpB [Capnocytophaga sputigena Capno]
 gi|213953763|gb|EEB65093.1| ATP-dependent chaperone ClpB [Capnocytophaga sputigena Capno]
          Length = 867

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 186/306 (60%), Gaps = 23/306 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE+ L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLNLEKELHRRVVGQEEAIEAVSDAIRRSRAGLQDPRRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQEKHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S  I      
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGSQIIQ----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K      ++    +D +     +D V+Q  L +   R EFL RI++I+ F 
Sbjct: 725 -----ETFEKYPNDTERA----IDES-----RDEVLQ--LLKETVRPEFLNRIDDIIMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +   + ++V  +L    +    +  +    D  ++ +   G+D  +GAR +K  ++++
Sbjct: 769 PLNAKNIRSIVKLQLQSLFRMVAKEGILLDATDEAIDYLAQKGFDPQFGARPVKRTIQKE 828

Query: 552 VVSQLA 557
           V+++L+
Sbjct: 829 VLNKLS 834


>gi|309789933|ref|ZP_07684510.1| ATPase AAA-2 domain protein [Oscillochloris trichoides DG-6]
 gi|308228065|gb|EFO81716.1| ATPase AAA-2 domain protein [Oscillochloris trichoides DG6]
          Length = 827

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 206/346 (59%), Gaps = 20/346 (5%)

Query: 227 DYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKR 286
           +  +D ++ QI+  +      + R  E E  +   +E RL +R++GQ  AI  ++ AI+R
Sbjct: 471 EVVDDEDVAQIVASWT--GVPVSRMLETEREKLIDMENRLHERVIGQHEAIVSLADAIRR 528

Query: 287 KENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAK 345
             +G  D   P+  F+F+G +G+GKTELAK LA ++  D ++A  R+DMSE+QE+H V++
Sbjct: 529 ARSGLRDPRRPIGSFIFVGPTGVGKTELAKALAEFMF-DSEDAMTRVDMSEFQERHTVSR 587

Query: 346 LIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGK 405
           LIGAPPGY+G+D+GGQ+T+++++ P  VVLFDE++KAHPDV   LLQ+ D+GRLTDG+G+
Sbjct: 588 LIGAPPGYVGYDEGGQITEQIRRRPYQVVLFDEIEKAHPDVFNALLQVLDDGRLTDGQGR 647

Query: 406 TIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDH 465
           T++ ++ + +MTSN  +         LR  G  F+    +I+      LD+  +R   D 
Sbjct: 648 TVDFRNTVIIMTSNAGTE-------HLRNTGIGFT----TINNRDPKTLDLKEARRKVDE 696

Query: 466 VVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDI 525
            ++ +      R EFL R++EIV F   S  +L  +V  ++N  A +  D+     +   
Sbjct: 697 ALRQVF-----RPEFLNRVDEIVLFHELSFEDLTRIVDLQVNDLANRLRDQKIALTLTQA 751

Query: 526 DVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
             E ++++GY+  YGAR ++  V+R + + ++    + V  +G  V
Sbjct: 752 AREYLVSEGYNPVYGARPLRRTVQRLLETPISRELLRGVFKEGDTV 797


>gi|385330270|ref|YP_005884221.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
 gi|311693420|gb|ADP96293.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
          Length = 858

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 192/307 (62%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ+ A+  +S A++R   G +D + P   FLFLG +G+GKT
Sbjct: 553 EGERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKALASFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ ++GRLTDG+G+T++ ++ + VMTSNL S+ I Q A  
Sbjct: 672 SVLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQKA-- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GEE              N +V        + V  ++  HF R EF+ R++E+V F 
Sbjct: 730 ----GEE--------------NYEVM------KNAVMEVVGTHF-RPEFINRVDEVVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++S++  +   ++   +K+ L + ++ +  D     +LA+ GYD  YGAR +K  ++R
Sbjct: 765 PLAESQIQGIARIQIESLSKR-LKEQDMKLELDDAAMELLAEVGYDPVYGARPLKRAIQR 823

Query: 551 QVVSQLA 557
            + + LA
Sbjct: 824 MIENPLA 830


>gi|436669980|ref|YP_007317719.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
 gi|428262252|gb|AFZ28201.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
          Length = 880

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/352 (37%), Positives = 215/352 (61%), Gaps = 30/352 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + R  E+E ++   LE+ L +R++GQE A+  ++ AI+R   G
Sbjct: 547 EADIAEIISKWT--GIPVSRLVESEMQKLLHLEEELHERVIGQEEAVRAVADAIQRSRAG 604

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  F+FLG +G+GKTELAK LA Y+  D ++A +R+DMSEY EKH VA+LIGA
Sbjct: 605 LADPNRPIASFIFLGPTGVGKTELAKALAEYLF-DTEDALVRIDMSEYMEKHAVARLIGA 663

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P +V+LFDE++KAHPDV  VLLQ+ D+GRLTD +G+T++ 
Sbjct: 664 PPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHPDVFNVLLQILDDGRLTDSQGRTVDF 723

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ I +MTSN+ S  I   A      G++        SK +            +D V++ 
Sbjct: 724 KNTIAIMTSNIGSIYILDVA------GDD--------SKYE----------QMRDRVMEA 759

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +  R   R EFL RI+EI++F    K EL  +V  ++    ++  ++  +  + D  +  
Sbjct: 760 V--RESFRPEFLNRIDEIIFFHSLRKDELREIVKLQVQRLEERLRERKLLLKISDEALNW 817

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           I+  GYD  YGAR +K  ++R++ + +A A  +    +G  + ++V+  + V
Sbjct: 818 IVQVGYDPVYGARPLKRAIQRELETPIAKAILRGEFHEGDTIYVHVEHERLV 869


>gi|56480150|ref|NP_708444.2| protein disaggregation chaperone [Shigella flexneri 2a str. 301]
 gi|380865371|sp|Q7UBW5.2|CLPB_SHIFL RecName: Full=Chaperone protein ClpB
 gi|56383701|gb|AAN44151.2| heat shock protein [Shigella flexneri 2a str. 301]
          Length = 857

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|54035818|sp|Q7X2S8.1|CLPB_MEIRU RecName: Full=Chaperone protein ClpB
 gi|31872394|gb|AAP59445.1| ClpB-like protein [Meiothermus ruber]
          Length = 854

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 187/307 (60%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE  L  R+VGQ+ AI  ++ AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 543 EGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKT 602

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEYQEKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 603 ELAKTLAASLF-DTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPY 661

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + ++TSN+ S  I +    
Sbjct: 662 SVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIILTSNIGSPLIFE---- 717

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G + +    R F       +L++HF R EFL R++EIV F 
Sbjct: 718 ---------------GIQSGQSYETIRERVFG------VLQQHF-RPEFLNRLDEIVVFR 755

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ ++  +V  +L    +K L +  I +    +    LA  GYD  +GAR +K  ++R
Sbjct: 756 PLAREQIAAIVQIQLE-AVRKRLAERRITLELSQEALDFLAQRGYDPVFGARPLKRVIQR 814

Query: 551 QVVSQLA 557
           ++ + L+
Sbjct: 815 ELETPLS 821


>gi|419761278|ref|ZP_14287534.1| chaperone ClpB [Thermosipho africanus H17ap60334]
 gi|407513584|gb|EKF48481.1| chaperone ClpB [Thermosipho africanus H17ap60334]
          Length = 788

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 201/339 (59%), Gaps = 37/339 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E+ +    E+ +  R+V QE A+ +++ AI++   G  D + P+  FLFLG SG+GKT
Sbjct: 477 ESEKEKLLKFEELVHQRMVDQEEAVKVVADAIRKARAGIKDPNRPIGTFLFLGPSGVGKT 536

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK +A  +    + A IR+DMSEY EKH VA+LIGAPPGY+G+D GGQLT  +++ P 
Sbjct: 537 ELAKTIAELLF-GSENALIRIDMSEYMEKHSVARLIGAPPGYVGYDQGGQLTDAVRRKPY 595

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHP+V  VLLQ+FD+GRLTDGKG T++ ++ I +MTSNLAS++I    L+
Sbjct: 596 SVILLDEVEKAHPEVFNVLLQVFDDGRLTDGKGNTVDFRNTIIIMTSNLASDKI----LR 651

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             + G +F K    I +S   +L                  +H+ R EF+ RI+ +V F 
Sbjct: 652 KVEAGVDFEK----IEESVREDL------------------KHYFRPEFINRIDHVVIFK 689

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P +K  +  +V + L    +  L + N+ I      +  LA+ GYD  +GAR ++  +ER
Sbjct: 690 PLTKEHMKEIVEK-LVARLENRLKEKNLKIKLTEKAKEYLAEKGYDPAFGARPLRRLIER 748

Query: 551 QVVSQLAAAHEKSVIGKGSFV-------RLYVQWSKEVS 582
           ++ + L+       I +G  V       +L V+  KE++
Sbjct: 749 EIETPLSVKIIAGEIAEGDIVLVDEENGKLIVEKEKELT 787


>gi|298491220|ref|YP_003721397.1| ATP-dependent chaperone ClpB ['Nostoc azollae' 0708]
 gi|298233138|gb|ADI64274.1| ATP-dependent chaperone ClpB ['Nostoc azollae' 0708]
          Length = 872

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 204/347 (58%), Gaps = 30/347 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + +  E+E+ +   LE  L  RIVGQ  A+  ++ AI+R   G
Sbjct: 539 EADIAEIISKWT--GIPISKLVESEKEKLLHLEDELHHRIVGQAEAVTAVADAIQRSRAG 596

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  F+FLG +G+GKTELAK LA Y+  D +E+ +R+DMSEY +KH V++LIGA
Sbjct: 597 LADPNRPIASFVFLGPTGVGKTELAKALAAYMF-DSEESLVRIDMSEYMDKHTVSRLIGA 655

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P AV+LFDE++KAHPDV  +LLQ+ D+GR+TD + +T++ 
Sbjct: 656 PPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNILLQILDDGRVTDSQARTVDF 715

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ I +MTSN+ S    Q+ L    +   +S+                       H V  
Sbjct: 716 KNTIIIMTSNIGS----QYILDFAGDDSRYSEMR---------------------HRVME 750

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
            ++  F R EFL RI+E++ F    KSEL  +V  +++   ++  DK     +    ++ 
Sbjct: 751 AMRNSF-RPEFLNRIDEVIIFHSLQKSELRQIVQLQVDRLRQRLSDKKMSLRLAGAALDF 809

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           +   GYD  +GAR +K  ++R++ +Q+A A  +     G  + + VQ
Sbjct: 810 LAQVGYDPVFGARPLKRAIQRELETQIAKAILRGEFSDGDTIFVDVQ 856


>gi|291295274|ref|YP_003506672.1| ATP-dependent chaperone ClpB [Meiothermus ruber DSM 1279]
 gi|290470233|gb|ADD27652.1| ATP-dependent chaperone ClpB [Meiothermus ruber DSM 1279]
          Length = 854

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 187/307 (60%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE  L  R+VGQ+ AI  ++ AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 543 EGEREKLLRLEDELHKRVVGQDEAIVAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKT 602

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  +R+DMSEYQEKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 603 ELAKTLAASLF-DTEENMVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPY 661

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + ++TSN+ S  I +    
Sbjct: 662 SVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIILTSNIGSPLIFE---- 717

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G + +    R F       +L++HF R EFL R++EIV F 
Sbjct: 718 ---------------GIQSGQSYETIRERVFG------VLQQHF-RPEFLNRLDEIVVFR 755

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P ++ ++  +V  +L    +K L +  I +    +    LA  GYD  +GAR +K  ++R
Sbjct: 756 PLAREQIAAIVQIQLE-AVRKRLAERRITLELSQEALDFLAQRGYDPVFGARPLKRVIQR 814

Query: 551 QVVSQLA 557
           ++ + L+
Sbjct: 815 ELETPLS 821


>gi|166154334|ref|YP_001654452.1| chaperone-protease ClpB [Chlamydia trachomatis 434/Bu]
 gi|301335586|ref|ZP_07223830.1| chaperone-protease ClpB [Chlamydia trachomatis L2tet1]
 gi|339625767|ref|YP_004717246.1| chaperone protein clpB [Chlamydia trachomatis L2c]
 gi|165930322|emb|CAP03808.1| chaperone-protease ClpB [Chlamydia trachomatis 434/Bu]
 gi|339461039|gb|AEJ77542.1| chaperone protein clpB [Chlamydia trachomatis L2c]
 gi|440537525|emb|CCP63039.1| protein disaggregation chaperone [Chlamydia trachomatis L1/1322/p2]
 gi|440540194|emb|CCP65708.1| protein disaggregation chaperone [Chlamydia trachomatis L2/25667R]
          Length = 867

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 193/307 (62%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALAELLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A IR DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FD+G LTD K + + CK+A+F+MTSN+ S E+A +  +                
Sbjct: 688 NILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQELADYCTK---------------- 731

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
             +G+ +D    +     VV P LK +F   EF+ RI++I+ F+P +  ++  +V  ++N
Sbjct: 732 --KGTIVD----KEAVLSVVAPALKNYF-SPEFINRIDDILPFVPLTTEDIVKIVGIQMN 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A + L++  I++ WD  +   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVALRLLER-KISLTWDDSLVLFLSEQGYDSAFGARPLKRLIQQKVVTMLSKALLKGDIK 843

Query: 567 KGSFVRL 573
            G  V L
Sbjct: 844 PGMAVEL 850


>gi|403714711|ref|ZP_10940596.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
 gi|403211238|dbj|GAB95279.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
          Length = 877

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 192/313 (61%), Gaps = 28/313 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R +E E  +   L++ L +R+VGQ+ A+ +++ AI R  +G  D   P+  FLFLG +
Sbjct: 557 VSRLQEGERAKLLRLDEILHERVVGQDEAVQLVADAIIRARSGVKDPRRPIGSFLFLGPT 616

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA  +  D  +  +R+DMSEYQE+H V++LIGAPPGY+G+++GGQLT+ +
Sbjct: 617 GVGKTELAKTLAQALF-DSGDNVVRIDMSEYQERHTVSRLIGAPPGYVGYEEGGQLTEAV 675

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVLFDE++KAHPDV   LLQ+ D+GRLTD +G+T++ ++ + +MTSN+ S    
Sbjct: 676 RRKPYSVVLFDEIEKAHPDVFNTLLQVLDDGRLTDSQGRTVDFRNTVIIMTSNIGS---- 731

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           Q  L   K+GE                    I++  +DH V   L+ HF R EFL RI+E
Sbjct: 732 QFLLDGVKDGE--------------------ITQEARDH-VNAALRAHF-RPEFLNRIDE 769

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           I+ F P S+ ++  +V   L+   ++  D+     V     E I  +G+D  YGAR ++ 
Sbjct: 770 IILFRPLSQGQIERIVDLMLDDLRERLADRRMTLEVTPAAEEFIAEEGFDPVYGARPLRR 829

Query: 547 EVERQVVSQLAAA 559
            + R+V +++  A
Sbjct: 830 FISREVETRVGRA 842


>gi|115360412|ref|YP_777549.1| ATPase [Burkholderia ambifaria AMMD]
 gi|115285740|gb|ABI91215.1| ATPase AAA-2 domain protein [Burkholderia ambifaria AMMD]
          Length = 953

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 120/305 (39%), Positives = 192/305 (62%), Gaps = 25/305 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R++GQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVIGQSDAVVAVSDAVRLSRAGLGQSHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ ++ IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAETVFGDE-QSIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREQLMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ D  V+ +   GY   +GAR +K +V + +
Sbjct: 791 LSKENIRSIVQIQLDRVVRTAAAQDITLVMGDALVDHLTEAGYQPEFGARELKRQVRQII 850

Query: 553 VSQLA 557
            ++LA
Sbjct: 851 ETKLA 855


>gi|385240544|ref|YP_005808385.1| chaperone-protease ClpB [Chlamydia trachomatis G/11222]
 gi|296436552|gb|ADH18722.1| chaperone-protease ClpB [Chlamydia trachomatis G/11222]
          Length = 867

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 193/307 (62%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALAELLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A IR DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FD+G LTD K + + CK+A+F+MTSN+ S E+A +  +                
Sbjct: 688 NILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQELADYCTK---------------- 731

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
             +G+ +D    +     VV P LK +F   EF+ RI++I+ F+P +  ++  +V  ++N
Sbjct: 732 --KGTIVD----KEAVLSVVAPALKNYF-SPEFINRIDDILPFVPLTTEDIVKIVGIQMN 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A + L++  I++ WD  +   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVALRLLER-KISLTWDDSLVLFLSEQGYDSAFGARPLKRLIQQKVVTMLSKALLKGDIK 843

Query: 567 KGSFVRL 573
            G  V L
Sbjct: 844 PGMAVEL 850


>gi|146282702|ref|YP_001172855.1| chaperone-associated ATPase [Pseudomonas stutzeri A1501]
 gi|145570907|gb|ABP80013.1| chaperone-associated ATPase, putative [Pseudomonas stutzeri A1501]
          Length = 964

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 200/327 (61%), Gaps = 31/327 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 616 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 675

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  ++ ++  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 676 LAKALAESVYGNES-ALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 734

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 735 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 793

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EFL RI+E++ F 
Sbjct: 794 RGAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDELIVFH 831

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              + E+  +V  +L+  A+ A  +  + + +D   V+    +GY   +GAR +K  +  
Sbjct: 832 ALGREEIRHIVGLQLDRVARSAASQ-GVTLTFDGTLVDHFAEEGYKPEFGARELKRLIRS 890

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQW 577
           ++ + LA       IGKG     + +W
Sbjct: 891 ELETALAREMLGGGIGKGDHA--HARW 915


>gi|415840105|ref|ZP_11521621.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
 gi|323188385|gb|EFZ73676.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
          Length = 823

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 499 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 556

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 557 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 615

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 616 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 675

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 676 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 710

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 711 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 767

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 768 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 821


>gi|169335290|ref|ZP_02862483.1| hypothetical protein ANASTE_01702 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258028|gb|EDS71994.1| ATP-dependent chaperone protein ClpB [Anaerofustis stercorihominis
           DSM 17244]
          Length = 862

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/335 (38%), Positives = 201/335 (60%), Gaps = 31/335 (9%)

Query: 227 DYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKR 286
           D   D  I +I+ K+   +  + +  E E  +   LE  L +R++GQ+ A+ ++S AI R
Sbjct: 532 DKVSDEEIAKIVSKWT--HIPVSKLVEGEREKLLHLEDTLHERVIGQDEAVRLVSDAIIR 589

Query: 287 KENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAK 345
              G  D   P+  FLFLG +G+GKTELAK LA+ +  D ++  IR+DMSEY EK  V++
Sbjct: 590 SRAGIQDPSKPIGSFLFLGPTGVGKTELAKTLAYTLF-DNEQNIIRIDMSEYMEKFSVSR 648

Query: 346 LIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGK 405
           LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV  +LLQ+ D+GR+TD +G+
Sbjct: 649 LIGAPPGYVGYDEGGQLTEAVRRNPYSVVLFDEIEKAHPDVFNILLQVLDDGRVTDSQGR 708

Query: 406 TIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDH 465
           TI+ K+ I ++TSNL S+ +            E +++   I+     N+D          
Sbjct: 709 TIDFKNTIIILTSNLGSDYLL-----------ESTEKYGDITDETKDNID---------- 747

Query: 466 VVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKH-NINIVWD 524
               +LK +F R EFL R++EIV + P  K E+  +V   L    K+  DK  ++NI  D
Sbjct: 748 ---KLLKANF-RPEFLNRLDEIVIYKPLKKDEISKIVDLMLKDLEKRMEDKFLHLNIT-D 802

Query: 525 IDVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
              E I+ +GYD  +GAR +K  ++ +V + +A +
Sbjct: 803 KAKEFIIDNGYDPIFGARPLKRFIQSKVETLIAKS 837


>gi|22298932|ref|NP_682179.1| ClpB protein [Thermosynechococcus elongatus BP-1]
 gi|54035850|sp|Q8DJ40.1|CLPB1_THEEB RecName: Full=Chaperone protein ClpB 1
 gi|22295113|dbj|BAC08941.1| ClpB protein [Thermosynechococcus elongatus BP-1]
          Length = 871

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 122/334 (36%), Positives = 203/334 (60%), Gaps = 30/334 (8%)

Query: 227 DYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKR 286
           D   +A+I +I+ K+      + +  E+E ++   LE+ L  R+VGQ+ A++ ++ AI+R
Sbjct: 534 DEVTEADIAEIISKWT--GIPVSKLVESEAQKLLHLEEELHKRVVGQDEAVSAVAEAIQR 591

Query: 287 KENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAK 345
              G  D + P+  F+FLG +G+GKTELAK LA ++  D +EA +R+DMSEY EKH V++
Sbjct: 592 SRAGLADPNRPIASFIFLGPTGVGKTELAKALAAFMF-DTEEALVRIDMSEYMEKHAVSR 650

Query: 346 LIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGK 405
           LIGAPPGY+G+D+GGQLT+ +++ P AVVLFDE++KAHPDV  V LQ+ D+GR+TD +G+
Sbjct: 651 LIGAPPGYVGYDEGGQLTEAIRRRPYAVVLFDEIEKAHPDVFNVFLQILDDGRVTDSQGR 710

Query: 406 TIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDH 465
           T++ K+ I +MTSN+ S    Q+ L +  +   +S+    + ++                
Sbjct: 711 TVDFKNTIIIMTSNIGS----QYILDVAGDDSRYSEMYNRVMEA---------------- 750

Query: 466 VVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDI 525
                ++ HF R EFL R++E + F    K +L  +V  ++    ++  D+H    + + 
Sbjct: 751 -----MRAHF-RPEFLNRVDEFIIFHSLRKDQLRQIVQLQVQRLQQRLSDRHITLSLTEK 804

Query: 526 DVETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
            ++ +   GYD  YGAR +K  +++Q+ + +A A
Sbjct: 805 AIDFLAEVGYDPVYGARPLKRAIQKQLETPIAKA 838


>gi|332981035|ref|YP_004462476.1| ATPase AAA-2 domain-containing protein [Mahella australiensis 50-1
           BON]
 gi|332698713|gb|AEE95654.1| ATPase AAA-2 domain protein [Mahella australiensis 50-1 BON]
          Length = 815

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 122/320 (38%), Positives = 191/320 (59%), Gaps = 19/320 (5%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE  R   LE+ L +R++GQ+ A+  ++ AI+R   G  D   P+  F+FLG +G+GKT
Sbjct: 494 EAESERLLNLEKILHERVIGQDEAVEAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKT 553

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA  +  D+  A +R+DMSEY EK+ V++LIG+PPGY+G+++GGQLT+ +++ P 
Sbjct: 554 ELARALAEAMFGDEN-AMVRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQLTEHVRRKPY 612

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  +LLQ+ ++GRLTDGKG+T++ ++ + +MTSN  ++ I +    
Sbjct: 613 TVVLFDEIEKAHPDVFNILLQILEDGRLTDGKGRTVDFRNTVIIMTSNAGAHLITKQK-- 670

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                        S+  S G +   T     KD+V++  L+R F R EFL R++EI+ F 
Sbjct: 671 -------------SLGFSGGQDESKTEYEKIKDNVMEE-LRRTF-RPEFLNRVDEIIVFH 715

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +  L  +V   L    K+  +K+    V     + +  +G+D  YGAR ++  ++R 
Sbjct: 716 PLDEENLRAIVDLMLKDVGKRLAEKNIYMEVTPAARDYLAKEGFDPIYGARPLRRAIQRM 775

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           V   L+    K  I  G  V
Sbjct: 776 VEDNLSEELLKGTIAPGDSV 795


>gi|166155209|ref|YP_001653464.1| chaperone-protease ClpB [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|165931197|emb|CAP06762.1| chaperone-protease ClpB [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|440525919|emb|CCP51403.1| protein disaggregation chaperone [Chlamydia trachomatis
           L2b/8200/07]
 gi|440535743|emb|CCP61256.1| protein disaggregation chaperone [Chlamydia trachomatis L2b/795]
 gi|440536633|emb|CCP62147.1| protein disaggregation chaperone [Chlamydia trachomatis L1/440/LN]
 gi|440538415|emb|CCP63929.1| protein disaggregation chaperone [Chlamydia trachomatis L1/115]
 gi|440539304|emb|CCP64818.1| protein disaggregation chaperone [Chlamydia trachomatis L1/224]
 gi|440541084|emb|CCP66598.1| protein disaggregation chaperone [Chlamydia trachomatis L3/404/LN]
 gi|440541972|emb|CCP67486.1| protein disaggregation chaperone [Chlamydia trachomatis L2b/UCH-2]
 gi|440542862|emb|CCP68376.1| protein disaggregation chaperone [Chlamydia trachomatis
           L2b/Canada2]
 gi|440543754|emb|CCP69268.1| protein disaggregation chaperone [Chlamydia trachomatis L2b/LST]
 gi|440544644|emb|CCP70158.1| protein disaggregation chaperone [Chlamydia trachomatis L2b/Ams1]
 gi|440545534|emb|CCP71048.1| protein disaggregation chaperone [Chlamydia trachomatis L2b/CV204]
 gi|440913796|emb|CCP90213.1| protein disaggregation chaperone [Chlamydia trachomatis L2b/Ams2]
 gi|440914686|emb|CCP91103.1| protein disaggregation chaperone [Chlamydia trachomatis L2b/Ams3]
 gi|440915577|emb|CCP91994.1| protein disaggregation chaperone [Chlamydia trachomatis
           L2b/Canada1]
 gi|440916471|emb|CCP92888.1| protein disaggregation chaperone [Chlamydia trachomatis L2b/Ams4]
 gi|440917361|emb|CCP93778.1| protein disaggregation chaperone [Chlamydia trachomatis L2b/Ams5]
          Length = 867

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 193/307 (62%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALAELLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A IR DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FD+G LTD K + + CK+A+F+MTSN+ S E+A +  +                
Sbjct: 688 NILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQELADYCTK---------------- 731

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
             +G+ +D    +     VV P LK +F   EF+ RI++I+ F+P +  ++  +V  ++N
Sbjct: 732 --KGTIVD----KEAVLSVVAPALKNYF-SPEFINRIDDILPFVPLTTEDIVKIVGIQMN 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A + L++  I++ WD  +   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVALRLLER-KISLTWDDSLVLFLSEQGYDSAFGARPLKRLIQQKVVTMLSKALLKGDIK 843

Query: 567 KGSFVRL 573
            G  V L
Sbjct: 844 PGMAVEL 850


>gi|332307414|ref|YP_004435265.1| ATP-dependent chaperone ClpB [Glaciecola sp. 4H-3-7+YE-5]
 gi|332174743|gb|AEE23997.1| ATP-dependent chaperone ClpB [Glaciecola sp. 4H-3-7+YE-5]
          Length = 858

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 189/307 (61%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E  L +R+VGQ  A+N +S AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 555 EGEKDKLMNMESALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 615 ELCKTLANFLF-DTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA-QHAL 430
           +V+L DE++KAHPDV  +LLQ+ D+GRLTDG+G+T++ K+ + +MTSNL S+ I  QH+ 
Sbjct: 674 SVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHS- 732

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                  ++ K   S+       LDV +S HF              R EFL R++E V F
Sbjct: 733 -----ENDYEKMKQSV-------LDV-LSTHF--------------RPEFLNRVDETVVF 765

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
            P   +++ ++  ++L    K+  DK     + D  +E +   G+D  YGAR +K  ++ 
Sbjct: 766 HPLGLAQITSIASKQLQLLRKRLEDKGIGLELTDAALEKLAEAGFDPVYGARPLKRAIQM 825

Query: 551 QVVSQLA 557
           ++ + LA
Sbjct: 826 EIENPLA 832


>gi|392374139|ref|YP_003205972.1| chaperone [Candidatus Methylomirabilis oxyfera]
 gi|258591832|emb|CBE68133.1| Chaperone [Candidatus Methylomirabilis oxyfera]
          Length = 865

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/371 (34%), Positives = 215/371 (57%), Gaps = 42/371 (11%)

Query: 222 GHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIIS 281
           G +  +  ++ ++ Q++ K+      + R  E E ++   +E++L++R+VGQ  AI  +S
Sbjct: 532 GAMLKEEVDEEDVAQVVSKWT--GVPVARMLEGETQKLLTMEEKLRERVVGQYEAIGAVS 589

Query: 282 AAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEK 340
            AI+R  +G  D + P+  F+FLG +G+GKTELA+ LA ++  D++ A IRLDMSEY EK
Sbjct: 590 DAIRRARSGLQDPNRPIGSFMFLGPTGVGKTELARALAAFLFDDER-AMIRLDMSEYMEK 648

Query: 341 HEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLT 400
           H V++LIGAPPGY+G ++GGQLT+ +++ P  V+L DE++KAH DV  +LLQ+ D+GRLT
Sbjct: 649 HTVSRLIGAPPGYVGFEEGGQLTEAVRRRPYCVLLLDEIEKAHTDVFNILLQILDDGRLT 708

Query: 401 DGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISR 460
           DG+G+T++ K+ I +MTSNL S  I +      ++ EE  +R                  
Sbjct: 709 DGQGRTVDFKNTIIIMTSNLGSQVIQELG---GRDDEEMRRR------------------ 747

Query: 461 HFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN 520
                 V   ++ HF R EFL R++EI+ F   S +++  +V  +L    K+ +++    
Sbjct: 748 ------VLEAVRTHF-RPEFLNRVDEILIFHTLSLAQIKAIVEIQLRRVGKRLVERKLDL 800

Query: 521 IVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
            V D   + +  +GYD  +GAR ++  ++R ++  LA    +    +G  VR+       
Sbjct: 801 EVTDAAKDFLAKEGYDPVFGARPLRRAIQRALLDPLARRLLEHEFAEGDTVRV------- 853

Query: 581 VSEDSAKGGII 591
              D+A+G +I
Sbjct: 854 ---DAARGELI 861


>gi|269124507|ref|YP_003297877.1| ATP-dependent chaperone ClpB [Thermomonospora curvata DSM 43183]
 gi|268309465|gb|ACY95839.1| ATP-dependent chaperone ClpB [Thermomonospora curvata DSM 43183]
          Length = 863

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/320 (38%), Positives = 184/320 (57%), Gaps = 31/320 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ +  R+VGQ  A+  +S A++R   G +D D P   FLFLG +G+GKT
Sbjct: 553 EGETAKLLRMEEEIGRRLVGQTQAVKAVSDAVRRARAGVSDPDRPTGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 613 ELAKALAEFLFDDER-AMVRIDMSEYSEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVL DEV+KAHP+V  +LLQ+ D+GRLTDG+G+T++ ++ I +MTSNL S  +      
Sbjct: 672 CVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILIMTSNLGSQYL------ 725

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                 +D T+S   K   V   ++  F + EFL R+++I+ F 
Sbjct: 726 ----------------------VDPTLSSEAKRESVMNTVRASF-KPEFLNRLDDIILFE 762

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             S  +L  +V  ++   AK+  D+     V D   E +   GYD  YGAR ++  V+  
Sbjct: 763 ALSTEDLTRIVDLQVARLAKRLADRRLKLTVTDAAREWLALTGYDPLYGARPLRRLVQTA 822

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           +  QLA       IG G  V
Sbjct: 823 IGDQLARELLAGTIGDGDEV 842


>gi|76788828|ref|YP_327914.1| ClpB [Chlamydia trachomatis A/HAR-13]
 gi|237802544|ref|YP_002887738.1| chaperone-protease ClpB [Chlamydia trachomatis B/Jali20/OT]
 gi|237804461|ref|YP_002888615.1| chaperone-protease ClpB [Chlamydia trachomatis B/TZ1A828/OT]
 gi|376282121|ref|YP_005155947.1| chaperone-protease ClpB [Chlamydia trachomatis A2497]
 gi|385269768|ref|YP_005812928.1| Clpb [Chlamydia trachomatis A2497]
 gi|76167358|gb|AAX50366.1| ClpB [Chlamydia trachomatis A/HAR-13]
 gi|231272761|emb|CAX09666.1| chaperone-protease ClpB [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273778|emb|CAX10560.1| chaperone-protease ClpB [Chlamydia trachomatis B/Jali20/OT]
 gi|347974908|gb|AEP34929.1| Clpb [Chlamydia trachomatis A2497]
 gi|371908151|emb|CAX08772.1| chaperone-protease ClpB [Chlamydia trachomatis A2497]
 gi|438690031|emb|CCP49288.1| protein disaggregation chaperone [Chlamydia trachomatis A/7249]
 gi|438691115|emb|CCP48389.1| protein disaggregation chaperone [Chlamydia trachomatis A/5291]
 gi|438692488|emb|CCP47490.1| protein disaggregation chaperone [Chlamydia trachomatis A/363]
          Length = 867

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 193/307 (62%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAIAAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALAELLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A IR DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FD+G LTD K + + CK+A+F+MTSN+ S E+A +  +                
Sbjct: 688 NILLQIFDDGILTDSKKRKVNCKNALFIMTSNIGSQELADYCTK---------------- 731

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
             +G+ +D    +     VV P LK +F   EF+ RI++I+ F+P +  ++  +V  ++N
Sbjct: 732 --KGTIVD----KEAVLSVVAPALKNYF-SPEFINRIDDILPFVPLTTEDIVKIVGIQMN 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A + L++  I++ WD  +   L++ GYD  +GAR +K  ++++VV+ L+ A  K  I 
Sbjct: 785 RVALRLLER-KISLTWDDSLVLFLSEQGYDSAFGARPLKRLIQQKVVTMLSKALLKGDIK 843

Query: 567 KGSFVRL 573
            G  V L
Sbjct: 844 PGMAVEL 850


>gi|417282105|ref|ZP_12069405.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
 gi|386246434|gb|EII88164.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
          Length = 857

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|223042918|ref|ZP_03612966.1| ATPase family associated with various cellular activities (AAA)
           protein [Staphylococcus capitis SK14]
 gi|222443772|gb|EEE49869.1| ATPase family associated with various cellular activities (AAA)
           protein [Staphylococcus capitis SK14]
          Length = 817

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 190/315 (60%), Gaps = 29/315 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LE  L +R++GQ  A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESDRLLNLEDTLHNRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   + +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+G++ +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGNDYETIRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDK---HNINI-VWDIDVETILADGYDVHYGAR 542
           I+ F   SK EL  +V        KK  D+    NINI V D   E I  +GYD  YGAR
Sbjct: 708 IIVFHKLSKEELKEIVT----MMVKKLTDRLSEQNINISVTDKAKEKIAEEGYDPEYGAR 763

Query: 543 SIKHEVERQVVSQLA 557
            +   +++ V   L+
Sbjct: 764 PLIRAIQKTVEDNLS 778


>gi|17232576|ref|NP_489124.1| endopeptidase Clp ATP-binding subunit B [Nostoc sp. PCC 7120]
 gi|17134222|dbj|BAB76783.1| endopeptidase Clp ATP-binding chain B [Nostoc sp. PCC 7120]
          Length = 835

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/348 (35%), Positives = 205/348 (58%), Gaps = 32/348 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + +  E+E+ +   LE  L  R++GQ+ A+  ++ AI+R   G
Sbjct: 502 EADIAEIISKWT--GIPISKLVESEKEKLLHLEDELHHRVIGQDEAVTAVADAIQRSRAG 559

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P   F+FLG +G+GKTELAK LA Y+  D ++A +R+DMSEY EKH V++LIGA
Sbjct: 560 LADPNRPTASFVFLGPTGVGKTELAKALASYMF-DTEDALVRIDMSEYMEKHAVSRLIGA 618

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P AV+LFDE++KAHPDV  + LQ+ D+GR+TD +G T++ 
Sbjct: 619 PPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDF 678

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ I +MTSN+ S    Q+ L +  +   + +                       H V  
Sbjct: 679 KNTIIIMTSNIGS----QYILDIAGDNSRYDEMR---------------------HRVME 713

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
            ++  F R EFL RI+E++ F    K EL  +V  ++    K  LD   I++ + D+ ++
Sbjct: 714 AMRNSF-RPEFLNRIDEVIIFHSLDKKELRQIVQLQVERL-KARLDDRKISLRLSDVALD 771

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            +   GYD  +GAR +K  ++R++ +Q+A A  +     G  + + VQ
Sbjct: 772 FLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGEFNDGDTIFVDVQ 819


>gi|91206187|ref|YP_538542.1| chaperone ClpB [Rickettsia bellii RML369-C]
 gi|157827795|ref|YP_001496859.1| chaperone ClpB [Rickettsia bellii OSU 85-389]
 gi|122990886|sp|Q1RGR1.1|CLPB_RICBR RecName: Full=Chaperone protein ClpB
 gi|91069731|gb|ABE05453.1| ClpB [Rickettsia bellii RML369-C]
 gi|157803099|gb|ABV79822.1| ClpB [Rickettsia bellii OSU 85-389]
          Length = 858

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/322 (38%), Positives = 192/322 (59%), Gaps = 31/322 (9%)

Query: 254 AEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           +E  R   +EQ+L++ ++GQ+ AI  +S A++R   G  D + PL  FLFLG +G+GKTE
Sbjct: 553 SERERLLVMEQKLRESVIGQDEAIKSVSDAVRRSRAGIQDINRPLGSFLFLGPTGVGKTE 612

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           L K LA ++  D + A +R+DMSEY EKH +++LIGAPPGY+G+D GG LT+ +++ P  
Sbjct: 613 LTKALAGFLF-DDRNAILRIDMSEYMEKHAISRLIGAPPGYVGYDQGGVLTEAVRRRPYQ 671

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+LFDEV+KAHPD+  ++LQ+ DEGRLTD +G T++ K+ I V+TSNL +  +       
Sbjct: 672 VILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQ---- 727

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
            KEGE+  K                     KD V++ +  +   + EFL R++EI+ F  
Sbjct: 728 -KEGEDTYK--------------------VKDQVMEYV--KMVFKPEFLNRLDEIILFHR 764

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQ 551
            ++S +H +V  +L    KK L   NI + +D      LA+ GYD  +GAR +K  ++R+
Sbjct: 765 LNQSNIHDIVKIQLE-GLKKILSAQNIILEFDEPALNYLAEKGYDPSFGARPLKRLIQRE 823

Query: 552 VVSQLAAAHEKSVIGKGSFVRL 573
           + + LA       +  G  V++
Sbjct: 824 IQNNLAKMILAGEVSSGKIVKI 845


>gi|403739831|ref|ZP_10952167.1| chaperone ClpB [Austwickia chelonae NBRC 105200]
 gi|403190574|dbj|GAB78937.1| chaperone ClpB [Austwickia chelonae NBRC 105200]
          Length = 889

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 156/425 (36%), Positives = 223/425 (52%), Gaps = 66/425 (15%)

Query: 142 AGANPNLGDLFNTVH--RTAAEKKMNPFEVLLKREDEFNDVLNPNMTFLGFSALHYGVVA 199
           AG N  +GDL  T+   R  AEK        L+RE +F           G S L YG + 
Sbjct: 476 AGLN-RVGDLKATLDELRVQAEK--------LQREGDFA----------GASRLLYGEIP 516

Query: 200 G-NTEVVELLLKSG---ADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAE 255
               E+ E     G   AD  VK+  G      A+D  I  ++  +    A   R  E E
Sbjct: 517 DREKELAEATAAEGEHRADAMVKEEVG------ADD--IADVISSWTGIPAG--RLLEGE 566

Query: 256 ERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELA 314
             +   +E RL  R++GQ +A+  +S A++R   G  D D P   FLFLG +G+GKTELA
Sbjct: 567 TDKLLHMEDRLGRRLIGQSAAVRAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKTELA 626

Query: 315 KQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVV 374
           K LA ++  D + A +R+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+ +++ P +VV
Sbjct: 627 KSLADFLFDDDR-AMVRIDMSEYSERHAVARLIGAPPGYVGYDEGGQLTEAVRRRPYSVV 685

Query: 375 LFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRK 434
           L DEV+KAHP+   +LLQ+ D+GRLTDG+G+T++ ++ I VMTSNL S  +   AL    
Sbjct: 686 LLDEVEKAHPETFDILLQVLDDGRLTDGQGRTVDFRNVILVMTSNLGSQYLIDPAL---- 741

Query: 435 EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFS 494
                         S     D  +      H V+   K      EFL R++E V F   S
Sbjct: 742 --------------SDAEKQDAVM------HTVRAAFK-----PEFLNRLDETVIFEALS 776

Query: 495 KSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVS 554
            +EL  +V  ++   A++  D+     V +   E +   GYD  YGAR ++  V+ Q+  
Sbjct: 777 TTELSRIVDLQVAALARRLTDRRITVEVTEAAREWLALTGYDPAYGARPLRRLVQVQIGD 836

Query: 555 QLAAA 559
           +LA A
Sbjct: 837 RLARA 841


>gi|150020312|ref|YP_001305666.1| ATPase [Thermosipho melanesiensis BI429]
 gi|149792833|gb|ABR30281.1| ATPase AAA-2 domain protein [Thermosipho melanesiensis BI429]
          Length = 789

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/361 (36%), Positives = 206/361 (57%), Gaps = 54/361 (14%)

Query: 224 IPSDYAEDANIKQILQKYAEKYADLQRE--------------------------KEAEER 257
           I S Y E A +KQ + K  ++Y +L+++                           E+E+ 
Sbjct: 423 INSKYKEAAEMKQQMFKLQKQYEELEKKYGTDTVSAETVAKVVESWTGIPATKMMESEKE 482

Query: 258 RKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQ 316
           +    E+ +  R+V QE A+ +++ AI++   G  D + P+  FLFLG SG+GKTELAK 
Sbjct: 483 KLLKFEELVHQRMVDQEEAVRVVADAIRKARAGIKDPNRPIGTFLFLGPSGVGKTELAKT 542

Query: 317 LAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLF 376
           +A  +    + A IR+DMSEY EKH VA+LIGAPPGY+G+D GGQLT+ +++ P +V+L 
Sbjct: 543 IAELLF-GSENALIRIDMSEYMEKHSVARLIGAPPGYVGYDQGGQLTEAVRRKPYSVILL 601

Query: 377 DEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEG 436
           DEV+KAHP+V  VLLQ+FD+GRLTDGKG T++ ++ I +MTSNLAS++I    L+  + G
Sbjct: 602 DEVEKAHPEVFNVLLQMFDDGRLTDGKGNTVDFRNTIIIMTSNLASDKI----LRKVEAG 657

Query: 437 EEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKS 496
            +F K            ++ T+    K          H+ R EF+ RI+ IV F P +K 
Sbjct: 658 IDFEK------------IEETVREDLK----------HYFRPEFINRIDHIVIFKPLTKE 695

Query: 497 ELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQL 556
            +  +V + +    K+  +K     + D   E + + GYD  +GAR ++  +ER++ + L
Sbjct: 696 NMKEIVEKLVAKLEKRLKEKKLKISLTDTAKEYLASKGYDPAFGARPLRRLIEREIETPL 755

Query: 557 A 557
           +
Sbjct: 756 S 756


>gi|15803116|ref|NP_289147.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           EDL933]
 gi|26248955|ref|NP_754995.1| protein disaggregation chaperone [Escherichia coli CFT073]
 gi|227888159|ref|ZP_04005964.1| endopeptidase Clp [Escherichia coli 83972]
 gi|291283865|ref|YP_003500683.1| heat shock protein [Escherichia coli O55:H7 str. CB9615]
 gi|293406102|ref|ZP_06650028.1| disaggregation chaperone [Escherichia coli FVEC1412]
 gi|293415865|ref|ZP_06658505.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
 gi|293448944|ref|ZP_06663365.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
 gi|298381834|ref|ZP_06991431.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
           coli FVEC1302]
 gi|300819934|ref|ZP_07100117.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
 gi|300900222|ref|ZP_07118408.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
 gi|300905088|ref|ZP_07122895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
 gi|300921136|ref|ZP_07137517.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
 gi|300922524|ref|ZP_07138633.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
 gi|300930683|ref|ZP_07146067.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
 gi|300940371|ref|ZP_07154959.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
 gi|300948986|ref|ZP_07163042.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
 gi|300957375|ref|ZP_07169592.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
 gi|300976570|ref|ZP_07173522.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
 gi|300986851|ref|ZP_07177834.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
 gi|301026352|ref|ZP_07189800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
 gi|301050461|ref|ZP_07197343.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
 gi|301305762|ref|ZP_07211849.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
 gi|301326708|ref|ZP_07220026.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
 gi|301644034|ref|ZP_07244052.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
 gi|309794105|ref|ZP_07688529.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
 gi|331643309|ref|ZP_08344440.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
 gi|331648336|ref|ZP_08349424.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
 gi|331678586|ref|ZP_08379260.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
 gi|332280712|ref|ZP_08393125.1| heat shock protein [Shigella sp. D9]
 gi|386630361|ref|YP_006150081.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
           i2']
 gi|386635281|ref|YP_006155000.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
           i14']
 gi|387883785|ref|YP_006314087.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
 gi|415866944|ref|ZP_11539240.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
 gi|415877635|ref|ZP_11543747.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
 gi|422355470|ref|ZP_16436185.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
 gi|422366379|ref|ZP_16446851.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
 gi|422376237|ref|ZP_16456489.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
 gi|422382964|ref|ZP_16463116.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
 gi|25289895|pir||E85905 heat shock protein [imported] - Escherichia coli (strain O157:H7,
           substrain EDL933)
 gi|12517013|gb|AAG57705.1|AE005489_4 heat shock protein [Escherichia coli O157:H7 str. EDL933]
 gi|26109361|gb|AAN81563.1|AE016764_245 ClpB protein [Escherichia coli CFT073]
 gi|209762698|gb|ACI79661.1| heat shock protein [Escherichia coli]
 gi|209762700|gb|ACI79662.1| heat shock protein [Escherichia coli]
 gi|209762702|gb|ACI79663.1| heat shock protein [Escherichia coli]
 gi|209762704|gb|ACI79664.1| heat shock protein [Escherichia coli]
 gi|209762706|gb|ACI79665.1| heat shock protein [Escherichia coli]
 gi|227834799|gb|EEJ45265.1| endopeptidase Clp [Escherichia coli 83972]
 gi|290763738|gb|ADD57699.1| Heat shock protein [Escherichia coli O55:H7 str. CB9615]
 gi|291322034|gb|EFE61463.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
 gi|291426108|gb|EFE99140.1| disaggregation chaperone [Escherichia coli FVEC1412]
 gi|291432054|gb|EFF05036.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
 gi|298276974|gb|EFI18490.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
           coli FVEC1302]
 gi|300297832|gb|EFJ54217.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
 gi|300308512|gb|EFJ63032.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
 gi|300315878|gb|EFJ65662.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
 gi|300356257|gb|EFJ72127.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
 gi|300395567|gb|EFJ79105.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
 gi|300403015|gb|EFJ86553.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
 gi|300407861|gb|EFJ91399.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
 gi|300411909|gb|EFJ95219.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
 gi|300421136|gb|EFK04447.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
 gi|300451543|gb|EFK15163.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
 gi|300454825|gb|EFK18318.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
 gi|300461457|gb|EFK24950.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
 gi|300527522|gb|EFK48584.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
 gi|300839016|gb|EFK66776.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
 gi|300846631|gb|EFK74391.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
 gi|301077608|gb|EFK92414.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
 gi|308122010|gb|EFO59272.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
 gi|315253120|gb|EFU33088.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
 gi|315290939|gb|EFU50304.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
 gi|324005832|gb|EGB75051.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
 gi|324012458|gb|EGB81677.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
 gi|324016581|gb|EGB85800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
 gi|331036780|gb|EGI09004.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
 gi|331042083|gb|EGI14225.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
 gi|331073416|gb|EGI44737.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
 gi|332103064|gb|EGJ06410.1| heat shock protein [Shigella sp. D9]
 gi|342927877|gb|EGU96599.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
 gi|355421260|gb|AER85457.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
           i2']
 gi|355426180|gb|AER90376.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
           i14']
 gi|386797243|gb|AFJ30277.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
          Length = 861

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 537 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 595 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 748

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 749 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 805

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 806 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 859


>gi|451337529|ref|ZP_21908071.1| ClpB protein [Amycolatopsis azurea DSM 43854]
 gi|449419838|gb|EMD25359.1| ClpB protein [Amycolatopsis azurea DSM 43854]
          Length = 865

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/332 (38%), Positives = 193/332 (58%), Gaps = 32/332 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ+ A+ ++S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 557 EGETGKLLRMEEELGRRVIGQKEAVQVVSDAVRRTRAGVADPDRPTGSFLFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 617 ELAKALAEFLFDDER-AMLRIDMSEYAEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  IA  AL 
Sbjct: 676 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQAIADPALD 735

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            R+                            ++  V  +++R F + EFL R+++IV F 
Sbjct: 736 ERQ----------------------------RNDAVMSVVQRQF-KPEFLNRLDDIVVFH 766

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
                EL ++V  ++   A +   +     V     E +  +G+D  YGAR ++  V+  
Sbjct: 767 ALGTDELTSIVDIQIERLASRLSRRRLTLDVTAGAREWLALNGFDPIYGARPLRRLVQSA 826

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
           +  +LA       I  G  VR+ +  S+E SE
Sbjct: 827 IGDKLAKQLLAGEIRDGDTVRVDIP-SQEASE 857


>gi|420321790|ref|ZP_14823615.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
 gi|391247097|gb|EIQ06353.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
          Length = 857

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|331654052|ref|ZP_08355052.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
 gi|331047434|gb|EGI19511.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
          Length = 861

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 537 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 595 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 748

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 749 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 805

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 806 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 859


>gi|82778016|ref|YP_404365.1| protein disaggregation chaperone [Shigella dysenteriae Sd197]
 gi|309789454|ref|ZP_07684040.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
 gi|81242164|gb|ABB62874.1| heat shock protein [Shigella dysenteriae Sd197]
 gi|308922697|gb|EFP68218.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
          Length = 857

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|419244574|ref|ZP_13787210.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
 gi|378089111|gb|EHW50958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
          Length = 857

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|417907371|ref|ZP_12551144.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           capitis VCU116]
 gi|341596264|gb|EGS38880.1| negative regulator of genetic competence ClpC/MecB [Staphylococcus
           capitis VCU116]
          Length = 817

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 190/315 (60%), Gaps = 29/315 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LE  L +R++GQ  A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESDRLLNLEDTLHNRVIGQNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   + +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTVIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+G++ +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGNDYETIRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDK---HNINI-VWDIDVETILADGYDVHYGAR 542
           I+ F   SK EL  +V        KK  D+    NINI V D   E I  +GYD  YGAR
Sbjct: 708 IIVFHKLSKEELKEIVT----MMVKKLTDRLSEQNINISVTDKAKEKIAEEGYDPEYGAR 763

Query: 543 SIKHEVERQVVSQLA 557
            +   +++ V   L+
Sbjct: 764 PLIRAIQKTVEDNLS 778


>gi|417140198|ref|ZP_11983448.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
 gi|417311067|ref|ZP_12097861.1| Chaperone protein ClpB [Escherichia coli PCN033]
 gi|417690778|ref|ZP_12339998.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
 gi|332088101|gb|EGI93226.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
 gi|338767303|gb|EGP22129.1| Chaperone protein ClpB [Escherichia coli PCN033]
 gi|386156321|gb|EIH12666.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
          Length = 857

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|283786204|ref|YP_003366069.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
 gi|282949658|emb|CBG89277.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
          Length = 857

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 206/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E E  +   +EQ L  R++GQ  A+  +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD +   H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYS---HMKEMVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAKIQLQRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            + A+GYD  YGAR +K  +++Q+ + LA       +  G  +RL     K V+
Sbjct: 802 LLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELIPGKTIRLEANGEKIVA 855


>gi|332716895|ref|YP_004444361.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
           H13-3]
 gi|325063580|gb|ADY67270.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium sp.
           H13-3]
          Length = 874

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 224/431 (51%), Gaps = 53/431 (12%)

Query: 154 TVHRTAAEKKMNPFEVLLKREDEFNDVLNP---NMTFLGFSALHYGVVAGNTEVVELLLK 210
           T    A ++K+     L KR D+  + L     N  F     L YG++ G       L K
Sbjct: 460 TARWQAEKQKLGHAADLKKRLDDARNELASAQRNGQFQRAGELTYGIIPG-------LEK 512

Query: 211 SGADPTVKDNSG--HIPSDYAEDANIKQILQKYA----EKYADLQREKEAEERRKYPLEQ 264
             A    +D+SG   +  +     NI  I+ ++     +K  + QREK         +E 
Sbjct: 513 QLAAAEARDSSGAGSMVQEVVTADNIAHIVSRWTGIPVDKMLEGQREK------LLRMED 566

Query: 265 RLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHR 323
            L   +VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  
Sbjct: 567 DLAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLF- 625

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D + A +RLDMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P  VVLFDE++KAH
Sbjct: 626 DDETAMVRLDMSEFMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAH 685

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDV  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSNL S  + Q                
Sbjct: 686 PDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQ---------------- 729

Query: 444 PSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVC 503
                  G N DV   R      V   ++ HF R EFL RI++I+ F    + E+  +V 
Sbjct: 730 ------MGDNDDVDSVRDL----VMERVRSHF-RPEFLNRIDDIILFHRLRRDEMGAIVE 778

Query: 504 RELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            +L       L    I +  D D    LA+ GYD  YGAR +K  +++ V  +LA     
Sbjct: 779 IQLKRLV-SLLGDRKITLELDEDARNWLANKGYDPAYGARPLKRVIQKTVQDRLAEMILG 837

Query: 563 SVIGKGSFVRL 573
             I  GS V++
Sbjct: 838 GEIPDGSRVKV 848


>gi|432432832|ref|ZP_19675258.1| chaperone ClpB [Escherichia coli KTE187]
 gi|432845561|ref|ZP_20078344.1| chaperone ClpB [Escherichia coli KTE141]
 gi|433208716|ref|ZP_20392389.1| chaperone ClpB [Escherichia coli KTE97]
 gi|430951678|gb|ELC70893.1| chaperone ClpB [Escherichia coli KTE187]
 gi|431394006|gb|ELG77549.1| chaperone ClpB [Escherichia coli KTE141]
 gi|431729349|gb|ELJ92981.1| chaperone ClpB [Escherichia coli KTE97]
          Length = 857

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|300825131|ref|ZP_07105224.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
 gi|300522403|gb|EFK43472.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
          Length = 861

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 537 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 595 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 748

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 749 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 805

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 806 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 859


>gi|218559513|ref|YP_002392426.1| protein disaggregation chaperone [Escherichia coli S88]
 gi|386600563|ref|YP_006102069.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
 gi|386603372|ref|YP_006109672.1| protein disaggregation chaperone [Escherichia coli UM146]
 gi|417086020|ref|ZP_11953301.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
 gi|419944842|ref|ZP_14461312.1| protein disaggregation chaperone [Escherichia coli HM605]
 gi|422750407|ref|ZP_16804318.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
 gi|422754665|ref|ZP_16808491.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
 gi|422840557|ref|ZP_16888527.1| chaperone ClpB [Escherichia coli H397]
 gi|432358930|ref|ZP_19602149.1| chaperone ClpB [Escherichia coli KTE4]
 gi|432363690|ref|ZP_19606853.1| chaperone ClpB [Escherichia coli KTE5]
 gi|432575473|ref|ZP_19811946.1| chaperone ClpB [Escherichia coli KTE55]
 gi|432588871|ref|ZP_19825226.1| chaperone ClpB [Escherichia coli KTE58]
 gi|432598715|ref|ZP_19834988.1| chaperone ClpB [Escherichia coli KTE62]
 gi|432755423|ref|ZP_19989970.1| chaperone ClpB [Escherichia coli KTE22]
 gi|432779502|ref|ZP_20013725.1| chaperone ClpB [Escherichia coli KTE59]
 gi|432788495|ref|ZP_20022624.1| chaperone ClpB [Escherichia coli KTE65]
 gi|432821941|ref|ZP_20055631.1| chaperone ClpB [Escherichia coli KTE118]
 gi|432823429|ref|ZP_20057112.1| chaperone ClpB [Escherichia coli KTE123]
 gi|433006053|ref|ZP_20194480.1| chaperone ClpB [Escherichia coli KTE227]
 gi|433008648|ref|ZP_20197063.1| chaperone ClpB [Escherichia coli KTE229]
 gi|433154671|ref|ZP_20339608.1| chaperone ClpB [Escherichia coli KTE176]
 gi|433164483|ref|ZP_20349217.1| chaperone ClpB [Escherichia coli KTE179]
 gi|433169557|ref|ZP_20354181.1| chaperone ClpB [Escherichia coli KTE180]
 gi|218366282|emb|CAR04034.1| protein disaggregation chaperone [Escherichia coli S88]
 gi|294493689|gb|ADE92445.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
 gi|307625856|gb|ADN70160.1| protein disaggregation chaperone [Escherichia coli UM146]
 gi|323951207|gb|EGB47083.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
 gi|323957039|gb|EGB52765.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
 gi|355350857|gb|EHG00053.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
 gi|371605986|gb|EHN94588.1| chaperone ClpB [Escherichia coli H397]
 gi|388417427|gb|EIL77270.1| protein disaggregation chaperone [Escherichia coli HM605]
 gi|430875662|gb|ELB99184.1| chaperone ClpB [Escherichia coli KTE4]
 gi|430885121|gb|ELC08048.1| chaperone ClpB [Escherichia coli KTE5]
 gi|431105099|gb|ELE09445.1| chaperone ClpB [Escherichia coli KTE55]
 gi|431119264|gb|ELE22272.1| chaperone ClpB [Escherichia coli KTE58]
 gi|431129647|gb|ELE31760.1| chaperone ClpB [Escherichia coli KTE62]
 gi|431301516|gb|ELF90722.1| chaperone ClpB [Escherichia coli KTE22]
 gi|431325766|gb|ELG13144.1| chaperone ClpB [Escherichia coli KTE59]
 gi|431336292|gb|ELG23411.1| chaperone ClpB [Escherichia coli KTE65]
 gi|431367010|gb|ELG53496.1| chaperone ClpB [Escherichia coli KTE118]
 gi|431379087|gb|ELG64023.1| chaperone ClpB [Escherichia coli KTE123]
 gi|431513111|gb|ELH91196.1| chaperone ClpB [Escherichia coli KTE227]
 gi|431522833|gb|ELH99978.1| chaperone ClpB [Escherichia coli KTE229]
 gi|431672931|gb|ELJ39163.1| chaperone ClpB [Escherichia coli KTE176]
 gi|431685703|gb|ELJ51270.1| chaperone ClpB [Escherichia coli KTE179]
 gi|431686554|gb|ELJ52115.1| chaperone ClpB [Escherichia coli KTE180]
          Length = 857

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I    +V  
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEVLK 801

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
           +L++ GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|260775122|ref|ZP_05884020.1| ClpB protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608823|gb|EEX34985.1| ClpB protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 857

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 116/308 (37%), Positives = 190/308 (61%), Gaps = 29/308 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E+ L  R++GQ  A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEEVLHARVIGQSEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLASFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFGS 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G                          K+ V++ ++ +HF R EFL R++E V F 
Sbjct: 732 LDYQG-------------------------MKEQVME-VVNKHF-RPEFLNRVDESVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +  + ++   +L   +K+  ++     V D  ++ I   G+D  YGAR +K  +++ 
Sbjct: 765 PLGQEHIKSIASIQLQRLSKRMEERGYALEVSDKALDLIAQVGFDPVYGARPLKRAIQQS 824

Query: 552 VVSQLAAA 559
           V + LA A
Sbjct: 825 VENPLAKA 832


>gi|432889814|ref|ZP_20102920.1| chaperone ClpB [Escherichia coli KTE165]
 gi|431433011|gb|ELH14685.1| chaperone ClpB [Escherichia coli KTE165]
          Length = 857

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|397669647|ref|YP_006511182.1| ATP-dependent chaperone protein ClpB [Propionibacterium propionicum
           F0230a]
 gi|395142717|gb|AFN46824.1| ATP-dependent chaperone protein ClpB [Propionibacterium propionicum
           F0230a]
          Length = 856

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 200/354 (56%), Gaps = 33/354 (9%)

Query: 220 NSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINI 279
           ++  + SD   + +I +++  +      + R  + E  +   +E+RL +R++GQ  A+  
Sbjct: 524 DASRMVSDEVSETDIAEVVAAWT--GIPVGRMLQGESEKLLHMEERLGERLIGQREAVKA 581

Query: 280 ISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQ 338
           +S A++R   G +D + P   FLFLG +G+GKTELAK LA ++  D + A +R+DMSEY 
Sbjct: 582 VSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKSLADFLF-DDETAMVRIDMSEYS 640

Query: 339 EKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGR 398
           EKH VA+L+GAPPGY+G+++GGQLT+ +++ P +V+L DEV+KAHPD+  +LLQ+ D+GR
Sbjct: 641 EKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDLFNILLQVLDDGR 700

Query: 399 LTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTI 458
           LTDG+G+T++ ++ I ++TSNL S  +A                            D  +
Sbjct: 701 LTDGQGRTVDFRNTILILTSNLGSQYLA----------------------------DPLL 732

Query: 459 SRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHN 518
           S   K   V  +++  F R EFL R+++IV F P ++ +L  +V  +L    ++   +  
Sbjct: 733 SDGEKREQVMGVVRSAF-RPEFLNRLDDIVMFEPLTRDDLRRIVAIQLERLGRRLASRRI 791

Query: 519 INIVWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVR 572
              V D   + +   G+D  YGAR ++  V+  V  QLA       I  G  VR
Sbjct: 792 TVEVTDAAADWLGEVGFDPVYGARPLRRLVQTTVEDQLARGLLSGQIHDGETVR 845


>gi|375255869|ref|YP_005015036.1| ATP-dependent chaperone protein ClpB [Tannerella forsythia ATCC
           43037]
 gi|363406967|gb|AEW20653.1| ATP-dependent chaperone protein ClpB [Tannerella forsythia ATCC
           43037]
          Length = 893

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 190/307 (61%), Gaps = 28/307 (9%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R+VGQE AI  I+ A++R   G  D   P+  F+FLG++G+GKTELAK LA Y
Sbjct: 591 LEDELHRRVVGQEEAIRAIADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEY 650

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEK    +L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 651 LF-DDENMMTRIDMSEYQEKFSATRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 709

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  VLLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S+ I ++  ++       +
Sbjct: 710 KAHPDVFNVLLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSSLIRENFERMTA-----A 764

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R   I++++   LD              +LK+   R EFL RI+E++ F P  +SE+  
Sbjct: 765 NRPQVIAETKTQVLD--------------LLKKSI-RPEFLNRIDEVIMFTPLDESEIRR 809

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  +L    +K L  + I + +     T LA+ GYD  +GAR +K  ++  V+++L+  
Sbjct: 810 IVDLQLK-NVQKMLAANGIALQFTDQAVTYLAEKGYDPQFGARPVKRVIQDLVLNRLS-- 866

Query: 560 HEKSVIG 566
             K ++G
Sbjct: 867 --KEILG 871


>gi|418410198|ref|ZP_12983508.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
           tumefaciens 5A]
 gi|358003757|gb|EHJ96088.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
           tumefaciens 5A]
          Length = 874

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 154/431 (35%), Positives = 224/431 (51%), Gaps = 53/431 (12%)

Query: 154 TVHRTAAEKKMNPFEVLLKREDEFNDVLNP---NMTFLGFSALHYGVVAGNTEVVELLLK 210
           T    A ++K+     L KR D+  + L     N  F     L YG++ G       L K
Sbjct: 460 TARWQAEKQKLGHAADLKKRLDDARNELASAQRNGQFQRAGELTYGIIPG-------LEK 512

Query: 211 SGADPTVKDNSG--HIPSDYAEDANIKQILQKYA----EKYADLQREKEAEERRKYPLEQ 264
             A    +D+SG   +  +     NI  I+ ++     +K  + QREK         +E 
Sbjct: 513 ELAAAEARDSSGAGSMVQEVVTADNIAHIVSRWTGIPVDKMLEGQREK------LLRMED 566

Query: 265 RLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHR 323
            L   +VGQ  A+  +S A++R   G  D + P+  F+FLG +G+GKTEL K LA ++  
Sbjct: 567 DLAKSVVGQGEAVQAVSKAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKSLARFLF- 625

Query: 324 DKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAH 383
           D + A +RLDMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P  VVLFDE++KAH
Sbjct: 626 DDETAMVRLDMSEFMEKHSVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAH 685

Query: 384 PDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRT 443
           PDV  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSNL S  + Q                
Sbjct: 686 PDVFNVLLQVLDDGRLTDGQGRTVDFKNTIIIMTSNLGSEFMTQ---------------- 729

Query: 444 PSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVC 503
                  G N DV   R      V   ++ HF R EFL RI++I+ F    + E+  +V 
Sbjct: 730 ------MGDNDDVDSVRDL----VMERVRSHF-RPEFLNRIDDIILFHRLRRDEMGAIVE 778

Query: 504 RELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEK 562
            +L       L    I +  D D    LA+ GYD  YGAR +K  +++ V  +LA     
Sbjct: 779 IQLKRLV-SLLGDRKITLELDEDARNWLANKGYDPAYGARPLKRVIQKTVQDRLAEMILG 837

Query: 563 SVIGKGSFVRL 573
             I  GS V++
Sbjct: 838 GEIPDGSRVKV 848


>gi|229028943|ref|ZP_04185042.1| Chaperone protein clpB 1 [Bacillus cereus AH1271]
 gi|228732223|gb|EEL83106.1| Chaperone protein clpB 1 [Bacillus cereus AH1271]
          Length = 866

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE  L +R++GQE A++++S A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEHILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S     H L 
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGS----AHLL- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                              G   D +I    ++ +V   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------DGLEADGSIKEESRE-LVMGQLRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + +E+  +V + +     +  D+H    + +   E ++  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTNEIKGIVDKIVKELQGRLADRHITVQLTNAAKEFVVEAGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           V ++LA
Sbjct: 833 VETKLA 838


>gi|444919655|ref|ZP_21239654.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cystobacter
           fuscus DSM 2262]
 gi|444708155|gb|ELW49249.1| ATP-dependent Clp protease ATP-binding subunit ClpA [Cystobacter
           fuscus DSM 2262]
          Length = 557

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 184/302 (60%), Gaps = 30/302 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E R+   LEQRL +R++GQ+ AI  +S AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 231 EDERRKLMYLEQRLHERVIGQDEAIRALSQAIRRARAGLKDPNKPIGSFLFLGPTGVGKT 290

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+K A IR DMSEY EKH V++L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 291 ELAKALAELMFGDEK-ALIRFDMSEYMEKHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPY 349

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDEV+KAHPDV  +LLQ+ D+GRLTD +GK +  K+ + + TSNL S  I Q A +
Sbjct: 350 SVLLFDEVEKAHPDVFHILLQVLDDGRLTDAQGKVVSFKNTVIIGTSNLGSK-IIQEATE 408

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            ++  +   +R                        V  +LK HF   EFL RI+E V F 
Sbjct: 409 RKEPQDRIRER------------------------VMSVLKGHF-PPEFLNRIDEAVMFE 443

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P +++++  ++   L    ++ L    I + V    ++ +L  G+D  YGAR ++ E++R
Sbjct: 444 PLNRAQIREIINLMLE-RTRRLLHGQAIQMEVTPAGIDALLERGWDPSYGARPMRREIQR 502

Query: 551 QV 552
            +
Sbjct: 503 SI 504


>gi|147365|gb|AAA24422.1| ATP-dependent protease binding subunit [Escherichia coli]
          Length = 857

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|418257812|ref|ZP_12881289.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
 gi|397896131|gb|EJL12551.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
          Length = 823

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 499 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 556

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 557 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 615

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 616 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 675

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 676 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 710

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 711 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 767

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 768 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 821


>gi|415845853|ref|ZP_11525254.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
 gi|417582098|ref|ZP_12232899.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
 gi|417756847|ref|ZP_12404920.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
 gi|418041510|ref|ZP_12679732.1| protein disaggregation chaperone [Escherichia coli W26]
 gi|419019520|ref|ZP_13566825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
 gi|419035734|ref|ZP_13582819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
 gi|419115980|ref|ZP_13660995.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
 gi|419403099|ref|ZP_13943819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
 gi|420327113|ref|ZP_14828859.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
 gi|420354031|ref|ZP_14855128.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
 gi|420364479|ref|ZP_14865357.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
 gi|420392397|ref|ZP_14891648.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
 gi|323167772|gb|EFZ53467.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
 gi|345335555|gb|EGW67992.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
 gi|377859211|gb|EHU24045.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
 gi|377873032|gb|EHU37672.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
 gi|377878905|gb|EHU43484.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
 gi|377959332|gb|EHV22828.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
 gi|378245354|gb|EHY05291.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
 gi|383475594|gb|EID67551.1| protein disaggregation chaperone [Escherichia coli W26]
 gi|391248417|gb|EIQ07658.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
 gi|391277052|gb|EIQ35812.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
 gi|391293394|gb|EIQ51676.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
 gi|391312164|gb|EIQ69787.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
          Length = 823

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 499 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 556

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 557 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 615

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 616 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 675

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 676 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 710

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 711 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 767

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 768 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 821


>gi|91211926|ref|YP_541912.1| protein disaggregation chaperone [Escherichia coli UTI89]
 gi|117624816|ref|YP_853729.1| protein disaggregation chaperone [Escherichia coli APEC O1]
 gi|237706819|ref|ZP_04537300.1| heat shock protein [Escherichia sp. 3_2_53FAA]
 gi|422361379|ref|ZP_16442005.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
 gi|91073500|gb|ABE08381.1| heat shock protein [Escherichia coli UTI89]
 gi|115513940|gb|ABJ02015.1| heat shock protein [Escherichia coli APEC O1]
 gi|226899859|gb|EEH86118.1| heat shock protein [Escherichia sp. 3_2_53FAA]
 gi|315284809|gb|EFU44254.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
          Length = 861

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 537 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 595 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 748

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I    +V  
Sbjct: 749 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEVLK 805

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
           +L++ GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 806 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 859


>gi|421474359|ref|ZP_15922402.1| Clp amino terminal domain protein, partial [Burkholderia
           multivorans CF2]
 gi|400232337|gb|EJO61964.1| Clp amino terminal domain protein, partial [Burkholderia
           multivorans CF2]
          Length = 924

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 201/331 (60%), Gaps = 27/331 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R+VGQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVVGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAESVFGDE-QAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREELMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ +  +E +   GY   +GAR +K +V + +
Sbjct: 791 LSKENIRSIVQIQLDRVVRTAAAQDIQLVMGESLIEHLTEAGYQPEFGARELKRQVRQTI 850

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
            ++LA       +  G   R+ V + K+  E
Sbjct: 851 ETRLAKEILADALKSGD--RVEVDYDKDRGE 879


>gi|421470887|ref|ZP_15919229.1| Clp amino terminal domain protein, partial [Burkholderia
           multivorans ATCC BAA-247]
 gi|400226753|gb|EJO56806.1| Clp amino terminal domain protein, partial [Burkholderia
           multivorans ATCC BAA-247]
          Length = 913

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 121/305 (39%), Positives = 192/305 (62%), Gaps = 25/305 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R+VGQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVVGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAESVFGDE-QAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREELMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ +  +E +   GY   +GAR +K +V + +
Sbjct: 791 LSKENIRSIVQIQLDRVVRTAAAQDIQLVMGESLIEHLTEAGYQPEFGARELKRQVRQTI 850

Query: 553 VSQLA 557
            ++LA
Sbjct: 851 ETRLA 855


>gi|30063993|ref|NP_838164.1| protein disaggregation chaperone [Shigella flexneri 2a str. 2457T]
 gi|110806537|ref|YP_690057.1| protein disaggregation chaperone [Shigella flexneri 5 str. 8401]
 gi|384544218|ref|YP_005728281.1| Chaperone protein clpB [Shigella flexneri 2002017]
 gi|415857540|ref|ZP_11532240.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
 gi|417704449|ref|ZP_12353544.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
 gi|417724281|ref|ZP_12373083.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
 gi|417734715|ref|ZP_12383363.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
 gi|417739488|ref|ZP_12388064.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
 gi|424838928|ref|ZP_18263565.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
 gi|30042249|gb|AAP17974.1| heat shock protein [Shigella flexneri 2a str. 2457T]
 gi|110616085|gb|ABF04752.1| heat shock protein [Shigella flexneri 5 str. 8401]
 gi|281602004|gb|ADA74988.1| Chaperone protein clpB [Shigella flexneri 2002017]
 gi|313648272|gb|EFS12716.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
 gi|332753866|gb|EGJ84243.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
 gi|332755659|gb|EGJ86022.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
 gi|332997821|gb|EGK17431.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
 gi|333015833|gb|EGK35169.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
 gi|383467980|gb|EID63001.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
          Length = 857

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|410647346|ref|ZP_11357781.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           agarilytica NO2]
 gi|410133201|dbj|GAC06180.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           agarilytica NO2]
          Length = 858

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 119/307 (38%), Positives = 189/307 (61%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E  L +R+VGQ  A+N +S AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 555 EGEKDKLMNMESALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 615 ELCKTLANFLF-DTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA-QHAL 430
           +V+L DE++KAHPDV  +LLQ+ D+GRLTDG+G+T++ K+ + +MTSNL S+ I  QH+ 
Sbjct: 674 SVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHS- 732

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                  ++ K   S+       LDV +S HF              R EFL R++E V F
Sbjct: 733 -----ENDYEKMKQSV-------LDV-LSTHF--------------RPEFLNRVDETVVF 765

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
            P   +++ ++  ++L    K+  DK     + D  +E +   G+D  YGAR +K  ++ 
Sbjct: 766 HPLGLAQITSIASKQLQLLRKRLEDKGIGLELTDAALEKLAEAGFDPVYGARPLKRAIQM 825

Query: 551 QVVSQLA 557
           ++ + LA
Sbjct: 826 EIENPLA 832


>gi|417286004|ref|ZP_12073295.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
 gi|386251245|gb|EII97412.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
          Length = 857

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|422970256|ref|ZP_16974049.1| chaperone ClpB [Escherichia coli TA124]
 gi|371600634|gb|EHN89406.1| chaperone ClpB [Escherichia coli TA124]
          Length = 857

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|119486634|ref|ZP_01620684.1| ATPase [Lyngbya sp. PCC 8106]
 gi|119456251|gb|EAW37383.1| ATPase [Lyngbya sp. PCC 8106]
          Length = 873

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/329 (37%), Positives = 201/329 (61%), Gaps = 32/329 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + +  E+E+ +   L+  L  R+VGQE A+  ++ AI+R   G
Sbjct: 539 EADIAEIISKWT--GIPISKLVESEKEKLLNLDSELHQRVVGQEEAVTAVAEAIQRSRAG 596

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D   P+  F+FLG +G+GKTELAK LA Y+  D +EA +R+DMSEY EKH V++LIGA
Sbjct: 597 LGDPKRPVASFIFLGPTGVGKTELAKALAAYLF-DTEEAMVRIDMSEYMEKHAVSRLIGA 655

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+D+GGQLT+ +++ P AV+LFDE++KAHPDV  V+LQ+ D+GR+TD +G T++ 
Sbjct: 656 PPGYVGYDEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDF 715

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+++ +MTSN+ S    Q+ L +  +   +        + QG  ++ T+   F       
Sbjct: 716 KNSVIIMTSNIGS----QYILDIVGDDSRY-------EEMQGRVME-TMRASF------- 756

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
                  R EFL RI+EI+ F    + +L  +V  ++    ++  ++     + D  V +
Sbjct: 757 -------RPEFLNRIDEIIIFHALQRQQLQKIVQLQIQHLVERLAERKMSLKLTDAAV-S 808

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLA 557
            LAD G+D  YGAR +K  ++R++ +Q+A
Sbjct: 809 FLADVGFDPVYGARPLKRAIQRELETQIA 837


>gi|221211794|ref|ZP_03584772.1| negative regulator of genetic competence ClpC/mecB [Burkholderia
           multivorans CGD1]
 gi|221167879|gb|EEE00348.1| negative regulator of genetic competence ClpC/mecB [Burkholderia
           multivorans CGD1]
          Length = 956

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 201/331 (60%), Gaps = 27/331 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R+VGQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVVGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAESVFGDE-QAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREELMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ +  +E +   GY   +GAR +K +V + +
Sbjct: 791 LSKENIRSIVQIQLDRVVRTAAAQDIQLVMGESLIEHLTEAGYQPEFGARELKRQVRQTI 850

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
            ++LA       +  G   R+ V + K+  E
Sbjct: 851 ETRLAKEILADALKSGD--RVEVDYDKDRGE 879


>gi|15832709|ref|NP_311482.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           Sakai]
 gi|16130513|ref|NP_417083.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. MG1655]
 gi|74313151|ref|YP_311570.1| protein disaggregation chaperone [Shigella sonnei Ss046]
 gi|82545045|ref|YP_408992.1| protein disaggregation chaperone [Shigella boydii Sb227]
 gi|110642755|ref|YP_670485.1| protein disaggregation chaperone [Escherichia coli 536]
 gi|157158232|ref|YP_001463913.1| protein disaggregation chaperone [Escherichia coli E24377A]
 gi|157162068|ref|YP_001459386.1| protein disaggregation chaperone [Escherichia coli HS]
 gi|168752067|ref|ZP_02777089.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
 gi|168758662|ref|ZP_02783669.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
 gi|168762385|ref|ZP_02787392.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
 gi|168771698|ref|ZP_02796705.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
 gi|168773480|ref|ZP_02798487.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
 gi|168778570|ref|ZP_02803577.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
 gi|168789495|ref|ZP_02814502.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
 gi|168801710|ref|ZP_02826717.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
 gi|170019129|ref|YP_001724083.1| protein disaggregation chaperone [Escherichia coli ATCC 8739]
 gi|170082197|ref|YP_001731517.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683980|ref|YP_001744777.1| protein disaggregation chaperone [Escherichia coli SMS-3-5]
 gi|188492624|ref|ZP_02999894.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
 gi|191169051|ref|ZP_03030814.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
 gi|191174569|ref|ZP_03036064.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
 gi|193064051|ref|ZP_03045136.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
 gi|194430164|ref|ZP_03062665.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
 gi|194439334|ref|ZP_03071412.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
 gi|195940187|ref|ZP_03085569.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           EC4024]
 gi|208805997|ref|ZP_03248334.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
 gi|208813052|ref|ZP_03254381.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
 gi|208819305|ref|ZP_03259625.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
 gi|209397795|ref|YP_002272065.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           EC4115]
 gi|209920069|ref|YP_002294153.1| protein disaggregation chaperone [Escherichia coli SE11]
 gi|215487931|ref|YP_002330362.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217326744|ref|ZP_03442827.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
           TW14588]
 gi|218555172|ref|YP_002388085.1| protein disaggregation chaperone [Escherichia coli IAI1]
 gi|218690711|ref|YP_002398923.1| protein disaggregation chaperone [Escherichia coli ED1a]
 gi|218696217|ref|YP_002403884.1| protein disaggregation chaperone [Escherichia coli 55989]
 gi|218701104|ref|YP_002408733.1| protein disaggregation chaperone [Escherichia coli IAI39]
 gi|218706094|ref|YP_002413613.1| protein disaggregation chaperone [Escherichia coli UMN026]
 gi|238901753|ref|YP_002927549.1| protein disaggregation chaperone [Escherichia coli BW2952]
 gi|251785915|ref|YP_003000219.1| ClpB chaperone [Escherichia coli BL21(DE3)]
 gi|253772512|ref|YP_003035343.1| protein disaggregation chaperone [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162563|ref|YP_003045671.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
 gi|254289324|ref|YP_003055072.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
 gi|254794540|ref|YP_003079377.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           TW14359]
 gi|260845274|ref|YP_003223052.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
           str. 12009]
 gi|260856682|ref|YP_003230573.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           11368]
 gi|260869274|ref|YP_003235676.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
           str. 11128]
 gi|261227477|ref|ZP_05941758.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255671|ref|ZP_05948204.1| protein disaggregation chaperone ClpB [Escherichia coli O157:H7
           str. FRIK966]
 gi|297516260|ref|ZP_06934646.1| protein disaggregation chaperone [Escherichia coli OP50]
 gi|301024190|ref|ZP_07187897.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
 gi|306812488|ref|ZP_07446686.1| protein disaggregation chaperone [Escherichia coli NC101]
 gi|307315094|ref|ZP_07594678.1| ATP-dependent chaperone ClpB [Escherichia coli W]
 gi|312965507|ref|ZP_07779739.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
 gi|331664159|ref|ZP_08365068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
 gi|331669344|ref|ZP_08370190.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
 gi|331674036|ref|ZP_08374798.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
 gi|378711951|ref|YP_005276844.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
 gi|383179715|ref|YP_005457720.1| protein disaggregation chaperone [Shigella sonnei 53G]
 gi|386281657|ref|ZP_10059317.1| chaperone ClpB [Escherichia sp. 4_1_40B]
 gi|386594643|ref|YP_006091043.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
 gi|386609990|ref|YP_006125476.1| protein disaggregation chaperone [Escherichia coli W]
 gi|386615294|ref|YP_006134960.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
 gi|386620191|ref|YP_006139771.1| ClpB protein [Escherichia coli NA114]
 gi|386625329|ref|YP_006145057.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
 gi|386640115|ref|YP_006106913.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
 gi|386700465|ref|YP_006164302.1| protein disaggregation chaperone [Escherichia coli KO11FL]
 gi|386705853|ref|YP_006169700.1| Chaperone protein clpB [Escherichia coli P12b]
 gi|386710479|ref|YP_006174200.1| protein disaggregation chaperone [Escherichia coli W]
 gi|387507957|ref|YP_006160213.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
           RM12579]
 gi|387608240|ref|YP_006097096.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
 gi|387613238|ref|YP_006116354.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
 gi|387622288|ref|YP_006129916.1| heat shock protein [Escherichia coli DH1]
 gi|387830483|ref|YP_003350420.1| ATP-dependent protease [Escherichia coli SE15]
 gi|388478624|ref|YP_490816.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. W3110]
 gi|404375936|ref|ZP_10981112.1| chaperone ClpB [Escherichia sp. 1_1_43]
 gi|407470487|ref|YP_006783070.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2009EL-2071]
 gi|407480851|ref|YP_006778000.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2011C-3493]
 gi|410481417|ref|YP_006768963.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2009EL-2050]
 gi|414577322|ref|ZP_11434499.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
 gi|415778701|ref|ZP_11489695.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
 gi|415784644|ref|ZP_11492465.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
 gi|415822347|ref|ZP_11510975.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
 gi|415828630|ref|ZP_11515128.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
 gi|416260475|ref|ZP_11640263.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
 gi|416279141|ref|ZP_11644813.1| ClpB protein [Shigella boydii ATCC 9905]
 gi|416299381|ref|ZP_11652348.1| ClpB protein [Shigella flexneri CDC 796-83]
 gi|416307900|ref|ZP_11654808.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
 gi|416321751|ref|ZP_11663599.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
 gi|416326811|ref|ZP_11666923.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
 gi|416336625|ref|ZP_11673095.1| ClpB protein [Escherichia coli WV_060327]
 gi|416345929|ref|ZP_11679302.1| ClpB protein [Escherichia coli EC4100B]
 gi|416776084|ref|ZP_11874696.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           G5101]
 gi|416787728|ref|ZP_11879610.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
           493-89]
 gi|416799412|ref|ZP_11884525.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
           2687]
 gi|416809743|ref|ZP_11889208.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
           3256-97]
 gi|416820392|ref|ZP_11893767.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
           5905]
 gi|416831290|ref|ZP_11899055.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           LSU-61]
 gi|416898784|ref|ZP_11928330.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
 gi|417115524|ref|ZP_11966660.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
 gi|417122593|ref|ZP_11971851.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
 gi|417135528|ref|ZP_11980313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
 gi|417150815|ref|ZP_11990554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
 gi|417154595|ref|ZP_11992724.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
 gi|417166450|ref|ZP_11999806.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
 gi|417174839|ref|ZP_12004635.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
 gi|417184955|ref|ZP_12010451.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
 gi|417188936|ref|ZP_12012494.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
 gi|417214357|ref|ZP_12022904.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
 gi|417222149|ref|ZP_12025589.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
 gi|417231520|ref|ZP_12032918.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
 gi|417251352|ref|ZP_12043117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
 gi|417262165|ref|ZP_12049645.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
 gi|417268814|ref|ZP_12056174.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
 gi|417272803|ref|ZP_12060152.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
 gi|417292279|ref|ZP_12079560.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
 gi|417299788|ref|ZP_12087015.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
           (10e)]
 gi|417587600|ref|ZP_12238367.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
 gi|417592929|ref|ZP_12243624.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
 gi|417597900|ref|ZP_12248535.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
 gi|417603264|ref|ZP_12253832.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
 gi|417609221|ref|ZP_12259723.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
 gi|417614061|ref|ZP_12264518.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
 gi|417619179|ref|ZP_12269592.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
 gi|417631236|ref|ZP_12281469.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
 gi|417635568|ref|ZP_12285779.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
 gi|417640347|ref|ZP_12290487.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
 gi|417663139|ref|ZP_12312720.1| ClpB protein [Escherichia coli AA86]
 gi|417667996|ref|ZP_12317540.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
 gi|417713893|ref|ZP_12362856.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
 gi|417718518|ref|ZP_12367412.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
 gi|417806140|ref|ZP_12453086.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           LB226692]
 gi|417833888|ref|ZP_12480335.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           01-09591]
 gi|417943982|ref|ZP_12587227.1| protein disaggregation chaperone [Escherichia coli XH140A]
 gi|417978062|ref|ZP_12618836.1| protein disaggregation chaperone [Escherichia coli XH001]
 gi|418267386|ref|ZP_12886607.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
 gi|418304087|ref|ZP_12915881.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
 gi|418944161|ref|ZP_13497263.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
           T22]
 gi|418957031|ref|ZP_13508956.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
 gi|418998025|ref|ZP_13545616.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
 gi|419003146|ref|ZP_13550669.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
 gi|419008833|ref|ZP_13556262.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
 gi|419014504|ref|ZP_13561851.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
 gi|419025019|ref|ZP_13572244.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
 gi|419030056|ref|ZP_13577216.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
 gi|419040762|ref|ZP_13587786.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
 gi|419045837|ref|ZP_13592780.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
 gi|419048721|ref|ZP_13595643.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
 gi|419056229|ref|ZP_13603069.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
 gi|419065813|ref|ZP_13612510.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
 gi|419070710|ref|ZP_13616330.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
 gi|419074940|ref|ZP_13620486.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
 gi|419081790|ref|ZP_13627237.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
 gi|419085877|ref|ZP_13631255.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
 gi|419094680|ref|ZP_13639956.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
 gi|419099393|ref|ZP_13644589.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
 gi|419105595|ref|ZP_13650721.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
 gi|419112772|ref|ZP_13657812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
 gi|419121670|ref|ZP_13666618.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
 gi|419127131|ref|ZP_13672012.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
 gi|419132616|ref|ZP_13677451.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
 gi|419137752|ref|ZP_13682543.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
 gi|419143546|ref|ZP_13688283.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
 gi|419149752|ref|ZP_13694404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
 gi|419155000|ref|ZP_13699560.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
 gi|419160287|ref|ZP_13704791.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
 gi|419171261|ref|ZP_13715147.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
 gi|419175974|ref|ZP_13719790.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
 gi|419181894|ref|ZP_13725506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
 gi|419187344|ref|ZP_13730855.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
 gi|419200632|ref|ZP_13743898.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
 gi|419203059|ref|ZP_13746263.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
 gi|419210823|ref|ZP_13753899.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
 gi|419219050|ref|ZP_13762016.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
 gi|419233674|ref|ZP_13776447.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
 gi|419238960|ref|ZP_13781674.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
 gi|419250237|ref|ZP_13792815.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
 gi|419256078|ref|ZP_13798590.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
 gi|419262386|ref|ZP_13804799.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
 gi|419273828|ref|ZP_13816122.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
 gi|419278381|ref|ZP_13820632.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
 gi|419285292|ref|ZP_13827462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
 gi|419290582|ref|ZP_13832671.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
 gi|419295915|ref|ZP_13837958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
 gi|419307494|ref|ZP_13849392.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
 gi|419312508|ref|ZP_13854369.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
 gi|419317886|ref|ZP_13859688.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
 gi|419324074|ref|ZP_13865766.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
 gi|419330102|ref|ZP_13871703.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
 gi|419335677|ref|ZP_13877199.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
 gi|419341032|ref|ZP_13882495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
 gi|419346241|ref|ZP_13887613.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
 gi|419371080|ref|ZP_13912196.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
 gi|419376528|ref|ZP_13917551.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
 gi|419381863|ref|ZP_13922812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
 gi|419387210|ref|ZP_13928085.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
 gi|419392708|ref|ZP_13933514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
 gi|419397694|ref|ZP_13938462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
 gi|419408266|ref|ZP_13948952.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
 gi|419413747|ref|ZP_13954398.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
 gi|419701433|ref|ZP_14229033.1| protein disaggregation chaperone [Escherichia coli SCI-07]
 gi|419806263|ref|ZP_14331376.1| protein disaggregation chaperone [Escherichia coli AI27]
 gi|419865985|ref|ZP_14388357.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
           CVM9340]
 gi|419872055|ref|ZP_14394099.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
           CVM9450]
 gi|419878481|ref|ZP_14399948.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9534]
 gi|419880948|ref|ZP_14402308.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9545]
 gi|419887812|ref|ZP_14408365.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9570]
 gi|419897690|ref|ZP_14417271.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9574]
 gi|419904021|ref|ZP_14423031.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM9942]
 gi|419906107|ref|ZP_14425039.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
 gi|419921252|ref|ZP_14439309.1| protein disaggregation chaperone [Escherichia coli 541-15]
 gi|419934375|ref|ZP_14451489.1| protein disaggregation chaperone [Escherichia coli 576-1]
 gi|419939900|ref|ZP_14456683.1| protein disaggregation chaperone [Escherichia coli 75]
 gi|419948570|ref|ZP_14464864.1| protein disaggregation chaperone [Escherichia coli CUMT8]
 gi|420091280|ref|ZP_14603031.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9602]
 gi|420093021|ref|ZP_14604709.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9634]
 gi|420103377|ref|ZP_14614257.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9455]
 gi|420110872|ref|ZP_14620772.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9553]
 gi|420116853|ref|ZP_14626228.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10021]
 gi|420124515|ref|ZP_14633366.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10030]
 gi|420128968|ref|ZP_14637514.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10224]
 gi|420135381|ref|ZP_14643468.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM9952]
 gi|420270857|ref|ZP_14773214.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
 gi|420276604|ref|ZP_14778887.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
 gi|420281787|ref|ZP_14784022.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
 gi|420289382|ref|ZP_14791562.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
 gi|420290345|ref|ZP_14792512.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
 gi|420299471|ref|ZP_14801520.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
 gi|420305417|ref|ZP_14807410.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
 gi|420312633|ref|ZP_14814551.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
 gi|420316427|ref|ZP_14818301.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
 gi|420386648|ref|ZP_14885996.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
 gi|421778297|ref|ZP_16214875.1| protein disaggregation chaperone [Escherichia coli AD30]
 gi|421813585|ref|ZP_16249302.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
 gi|421819401|ref|ZP_16254896.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
 gi|421825399|ref|ZP_16260756.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
 gi|421831559|ref|ZP_16266849.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
 gi|422760079|ref|ZP_16813839.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
 gi|422767878|ref|ZP_16821604.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
 gi|422771505|ref|ZP_16825195.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
 gi|422776207|ref|ZP_16829862.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
 gi|422787849|ref|ZP_16840587.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
 gi|422803517|ref|ZP_16852003.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
 gi|422819253|ref|ZP_16867464.1| chaperone ClpB [Escherichia coli M919]
 gi|422832204|ref|ZP_16880320.1| chaperone ClpB [Escherichia coli B093]
 gi|422836955|ref|ZP_16884987.1| chaperone ClpB [Escherichia coli E101]
 gi|422962607|ref|ZP_16972880.1| chaperone ClpB [Escherichia coli H494]
 gi|422988714|ref|ZP_16979487.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
 gi|422995606|ref|ZP_16986370.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
 gi|423000751|ref|ZP_16991505.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
 gi|423004423|ref|ZP_16995169.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
 gi|423010923|ref|ZP_17001657.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
 gi|423020151|ref|ZP_17010860.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
 gi|423025317|ref|ZP_17016014.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
 gi|423031138|ref|ZP_17021825.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
 gi|423038963|ref|ZP_17029637.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|423044083|ref|ZP_17034750.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|423045811|ref|ZP_17036471.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|423054350|ref|ZP_17043157.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|423061325|ref|ZP_17050121.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|423704031|ref|ZP_17678456.1| chaperone ClpB [Escherichia coli H730]
 gi|423706710|ref|ZP_17681093.1| chaperone ClpB [Escherichia coli B799]
 gi|423726319|ref|ZP_17700374.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
 gi|424078689|ref|ZP_17815677.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
 gi|424085155|ref|ZP_17821656.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
 gi|424091567|ref|ZP_17827508.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
 gi|424098188|ref|ZP_17833506.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
 gi|424104420|ref|ZP_17839198.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
 gi|424111092|ref|ZP_17845334.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
 gi|424117029|ref|ZP_17850875.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
 gi|424123211|ref|ZP_17856539.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
 gi|424129376|ref|ZP_17862289.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
 gi|424135648|ref|ZP_17868118.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
 gi|424142216|ref|ZP_17874109.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
 gi|424148643|ref|ZP_17880025.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
 gi|424154459|ref|ZP_17885421.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
 gi|424251186|ref|ZP_17890985.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
 gi|424329347|ref|ZP_17896896.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
 gi|424450894|ref|ZP_17902607.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
 gi|424457097|ref|ZP_17908240.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
 gi|424463535|ref|ZP_17913979.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
 gi|424469873|ref|ZP_17919703.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
 gi|424476396|ref|ZP_17925719.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
 gi|424482151|ref|ZP_17931138.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
 gi|424488309|ref|ZP_17936884.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
 gi|424494886|ref|ZP_17942609.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
 gi|424501680|ref|ZP_17948582.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
 gi|424507926|ref|ZP_17954329.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
 gi|424515247|ref|ZP_17959938.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
 gi|424521466|ref|ZP_17965601.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
 gi|424527359|ref|ZP_17971082.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
 gi|424545659|ref|ZP_17988072.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
 gi|424551901|ref|ZP_17993766.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
 gi|424558086|ref|ZP_17999509.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
 gi|424564431|ref|ZP_18005439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
 gi|424570565|ref|ZP_18011125.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
 gi|424576712|ref|ZP_18016793.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
 gi|424582550|ref|ZP_18022202.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
 gi|424751118|ref|ZP_18179160.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CFSAN001629]
 gi|424761399|ref|ZP_18188980.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CFSAN001630]
 gi|424773376|ref|ZP_18200438.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CFSAN001632]
 gi|424815314|ref|ZP_18240465.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
 gi|425100569|ref|ZP_18503290.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
 gi|425105317|ref|ZP_18507640.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
 gi|425116070|ref|ZP_18517867.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
 gi|425120835|ref|ZP_18522528.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
 gi|425127258|ref|ZP_18528433.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
 gi|425132990|ref|ZP_18533845.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
 gi|425139496|ref|ZP_18539883.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
 gi|425145289|ref|ZP_18545289.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
 gi|425151401|ref|ZP_18551020.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
 gi|425163622|ref|ZP_18562514.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
 gi|425169365|ref|ZP_18567845.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
 gi|425181458|ref|ZP_18579160.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
 gi|425187724|ref|ZP_18585004.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
 gi|425194498|ref|ZP_18591273.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
 gi|425207358|ref|ZP_18603162.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
 gi|425213113|ref|ZP_18608520.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
 gi|425219234|ref|ZP_18614207.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
 gi|425225784|ref|ZP_18620257.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
 gi|425232047|ref|ZP_18626093.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
 gi|425237966|ref|ZP_18631691.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
 gi|425244183|ref|ZP_18637497.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
 gi|425250353|ref|ZP_18643295.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
 gi|425256175|ref|ZP_18648701.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
 gi|425262430|ref|ZP_18654445.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
 gi|425268429|ref|ZP_18660064.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
 gi|425273745|ref|ZP_18665153.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
 gi|425284289|ref|ZP_18675324.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
 gi|425295864|ref|ZP_18686073.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
 gi|425306330|ref|ZP_18696028.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
 gi|425312568|ref|ZP_18701759.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
 gi|425324632|ref|ZP_18713008.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
 gi|425330997|ref|ZP_18718860.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
 gi|425337173|ref|ZP_18724553.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
 gi|425343514|ref|ZP_18730411.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
 gi|425349324|ref|ZP_18735799.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
 gi|425355619|ref|ZP_18741692.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
 gi|425361583|ref|ZP_18747236.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
 gi|425367763|ref|ZP_18752931.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
 gi|425374112|ref|ZP_18758760.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
 gi|425380770|ref|ZP_18764785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
 gi|425387002|ref|ZP_18770565.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
 gi|425395081|ref|ZP_18778175.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
 gi|425399791|ref|ZP_18782502.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
 gi|425405876|ref|ZP_18788105.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
 gi|425412267|ref|ZP_18794036.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
 gi|425418589|ref|ZP_18799865.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
 gi|425423439|ref|ZP_18804603.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
 gi|425429849|ref|ZP_18810467.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
 gi|427805771|ref|ZP_18972838.1| heat shock protein [Escherichia coli chi7122]
 gi|427810267|ref|ZP_18977332.1| heat shock protein [Escherichia coli]
 gi|428948274|ref|ZP_19020564.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
 gi|428954364|ref|ZP_19026171.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
 gi|428960336|ref|ZP_19031650.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
 gi|428966954|ref|ZP_19037681.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
 gi|428972670|ref|ZP_19043017.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
 gi|428979173|ref|ZP_19049007.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
 gi|428984924|ref|ZP_19054328.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
 gi|428991079|ref|ZP_19060077.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
 gi|428996949|ref|ZP_19065554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
 gi|429003194|ref|ZP_19071327.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
 gi|429009275|ref|ZP_19076800.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
 gi|429021689|ref|ZP_19088221.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
 gi|429033930|ref|ZP_19099462.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
 gi|429039986|ref|ZP_19105104.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
 gi|429045892|ref|ZP_19110615.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
 gi|429051310|ref|ZP_19115880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
 gi|429056686|ref|ZP_19121010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
 gi|429062187|ref|ZP_19126210.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
 gi|429068460|ref|ZP_19131935.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
 gi|429074406|ref|ZP_19137661.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
 gi|429079599|ref|ZP_19142738.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
 gi|429720179|ref|ZP_19255107.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429772079|ref|ZP_19304100.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
 gi|429777024|ref|ZP_19309000.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429785751|ref|ZP_19317647.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
 gi|429791641|ref|ZP_19323496.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
 gi|429792489|ref|ZP_19324339.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
 gi|429799065|ref|ZP_19330864.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
 gi|429807578|ref|ZP_19339303.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
 gi|429812478|ref|ZP_19344162.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
 gi|429818000|ref|ZP_19349638.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
 gi|429823211|ref|ZP_19354806.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
 gi|429827622|ref|ZP_19358673.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
 gi|429833979|ref|ZP_19364338.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
 gi|429904586|ref|ZP_19370565.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429908724|ref|ZP_19374688.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429914596|ref|ZP_19380543.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429919626|ref|ZP_19385557.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429925446|ref|ZP_19391359.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429929382|ref|ZP_19395284.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429935921|ref|ZP_19401807.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429941601|ref|ZP_19407475.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429944282|ref|ZP_19410144.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429951840|ref|ZP_19417686.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429955189|ref|ZP_19421021.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
 gi|432354507|ref|ZP_19597777.1| chaperone ClpB [Escherichia coli KTE2]
 gi|432370814|ref|ZP_19613897.1| chaperone ClpB [Escherichia coli KTE10]
 gi|432377798|ref|ZP_19620787.1| chaperone ClpB [Escherichia coli KTE12]
 gi|432382286|ref|ZP_19625228.1| chaperone ClpB [Escherichia coli KTE15]
 gi|432388263|ref|ZP_19631146.1| chaperone ClpB [Escherichia coli KTE16]
 gi|432389693|ref|ZP_19632563.1| chaperone ClpB [Escherichia coli KTE21]
 gi|432398538|ref|ZP_19641317.1| chaperone ClpB [Escherichia coli KTE25]
 gi|432402856|ref|ZP_19645607.1| chaperone ClpB [Escherichia coli KTE26]
 gi|432407665|ref|ZP_19650372.1| chaperone ClpB [Escherichia coli KTE28]
 gi|432412756|ref|ZP_19655417.1| chaperone ClpB [Escherichia coli KTE39]
 gi|432418069|ref|ZP_19660667.1| chaperone ClpB [Escherichia coli KTE44]
 gi|432422935|ref|ZP_19665478.1| chaperone ClpB [Escherichia coli KTE178]
 gi|432427129|ref|ZP_19669624.1| chaperone ClpB [Escherichia coli KTE181]
 gi|432437314|ref|ZP_19679702.1| chaperone ClpB [Escherichia coli KTE188]
 gi|432442055|ref|ZP_19684394.1| chaperone ClpB [Escherichia coli KTE189]
 gi|432447160|ref|ZP_19689459.1| chaperone ClpB [Escherichia coli KTE191]
 gi|432450725|ref|ZP_19692987.1| chaperone ClpB [Escherichia coli KTE193]
 gi|432457655|ref|ZP_19699836.1| chaperone ClpB [Escherichia coli KTE201]
 gi|432461588|ref|ZP_19703734.1| chaperone ClpB [Escherichia coli KTE204]
 gi|432471922|ref|ZP_19713964.1| chaperone ClpB [Escherichia coli KTE206]
 gi|432476816|ref|ZP_19718811.1| chaperone ClpB [Escherichia coli KTE208]
 gi|432486371|ref|ZP_19728285.1| chaperone ClpB [Escherichia coli KTE212]
 gi|432490359|ref|ZP_19732227.1| chaperone ClpB [Escherichia coli KTE213]
 gi|432496650|ref|ZP_19738446.1| chaperone ClpB [Escherichia coli KTE214]
 gi|432501075|ref|ZP_19742831.1| chaperone ClpB [Escherichia coli KTE216]
 gi|432505394|ref|ZP_19747116.1| chaperone ClpB [Escherichia coli KTE220]
 gi|432514894|ref|ZP_19752116.1| chaperone ClpB [Escherichia coli KTE224]
 gi|432518691|ref|ZP_19755876.1| chaperone ClpB [Escherichia coli KTE228]
 gi|432524788|ref|ZP_19761914.1| chaperone ClpB [Escherichia coli KTE230]
 gi|432527353|ref|ZP_19764443.1| chaperone ClpB [Escherichia coli KTE233]
 gi|432534909|ref|ZP_19771880.1| chaperone ClpB [Escherichia coli KTE234]
 gi|432538812|ref|ZP_19775712.1| chaperone ClpB [Escherichia coli KTE235]
 gi|432544230|ref|ZP_19781071.1| chaperone ClpB [Escherichia coli KTE236]
 gi|432549721|ref|ZP_19786486.1| chaperone ClpB [Escherichia coli KTE237]
 gi|432554637|ref|ZP_19791357.1| chaperone ClpB [Escherichia coli KTE47]
 gi|432559798|ref|ZP_19796466.1| chaperone ClpB [Escherichia coli KTE49]
 gi|432564879|ref|ZP_19801458.1| chaperone ClpB [Escherichia coli KTE51]
 gi|432569677|ref|ZP_19806186.1| chaperone ClpB [Escherichia coli KTE53]
 gi|432576854|ref|ZP_19813309.1| chaperone ClpB [Escherichia coli KTE56]
 gi|432593809|ref|ZP_19830123.1| chaperone ClpB [Escherichia coli KTE60]
 gi|432603220|ref|ZP_19839463.1| chaperone ClpB [Escherichia coli KTE66]
 gi|432608476|ref|ZP_19844660.1| chaperone ClpB [Escherichia coli KTE67]
 gi|432612566|ref|ZP_19848726.1| chaperone ClpB [Escherichia coli KTE72]
 gi|432617786|ref|ZP_19853897.1| chaperone ClpB [Escherichia coli KTE75]
 gi|432622822|ref|ZP_19858849.1| chaperone ClpB [Escherichia coli KTE76]
 gi|432628214|ref|ZP_19864189.1| chaperone ClpB [Escherichia coli KTE77]
 gi|432632352|ref|ZP_19868276.1| chaperone ClpB [Escherichia coli KTE80]
 gi|432637831|ref|ZP_19873699.1| chaperone ClpB [Escherichia coli KTE81]
 gi|432642068|ref|ZP_19877899.1| chaperone ClpB [Escherichia coli KTE83]
 gi|432647119|ref|ZP_19882907.1| chaperone ClpB [Escherichia coli KTE86]
 gi|432652117|ref|ZP_19887869.1| chaperone ClpB [Escherichia coli KTE87]
 gi|432656755|ref|ZP_19892457.1| chaperone ClpB [Escherichia coli KTE93]
 gi|432661801|ref|ZP_19897441.1| chaperone ClpB [Escherichia coli KTE111]
 gi|432667016|ref|ZP_19902595.1| chaperone ClpB [Escherichia coli KTE116]
 gi|432671693|ref|ZP_19907221.1| chaperone ClpB [Escherichia coli KTE119]
 gi|432675714|ref|ZP_19911170.1| chaperone ClpB [Escherichia coli KTE142]
 gi|432681202|ref|ZP_19916574.1| chaperone ClpB [Escherichia coli KTE143]
 gi|432686415|ref|ZP_19921709.1| chaperone ClpB [Escherichia coli KTE156]
 gi|432687799|ref|ZP_19923081.1| chaperone ClpB [Escherichia coli KTE161]
 gi|432695402|ref|ZP_19930599.1| chaperone ClpB [Escherichia coli KTE162]
 gi|432700023|ref|ZP_19935175.1| chaperone ClpB [Escherichia coli KTE169]
 gi|432705369|ref|ZP_19940468.1| chaperone ClpB [Escherichia coli KTE171]
 gi|432706863|ref|ZP_19941944.1| chaperone ClpB [Escherichia coli KTE6]
 gi|432714328|ref|ZP_19949363.1| chaperone ClpB [Escherichia coli KTE8]
 gi|432719738|ref|ZP_19954705.1| chaperone ClpB [Escherichia coli KTE9]
 gi|432724058|ref|ZP_19958975.1| chaperone ClpB [Escherichia coli KTE17]
 gi|432728640|ref|ZP_19963517.1| chaperone ClpB [Escherichia coli KTE18]
 gi|432733331|ref|ZP_19968159.1| chaperone ClpB [Escherichia coli KTE45]
 gi|432738082|ref|ZP_19972837.1| chaperone ClpB [Escherichia coli KTE42]
 gi|432742324|ref|ZP_19977042.1| chaperone ClpB [Escherichia coli KTE23]
 gi|432746588|ref|ZP_19981252.1| chaperone ClpB [Escherichia coli KTE43]
 gi|432751038|ref|ZP_19985639.1| chaperone ClpB [Escherichia coli KTE29]
 gi|432760418|ref|ZP_19994910.1| chaperone ClpB [Escherichia coli KTE46]
 gi|432765952|ref|ZP_20000384.1| chaperone ClpB [Escherichia coli KTE48]
 gi|432771542|ref|ZP_20005867.1| chaperone ClpB [Escherichia coli KTE50]
 gi|432775671|ref|ZP_20009939.1| chaperone ClpB [Escherichia coli KTE54]
 gi|432784507|ref|ZP_20018686.1| chaperone ClpB [Escherichia coli KTE63]
 gi|432793784|ref|ZP_20027867.1| chaperone ClpB [Escherichia coli KTE78]
 gi|432795283|ref|ZP_20029345.1| chaperone ClpB [Escherichia coli KTE79]
 gi|432806777|ref|ZP_20040697.1| chaperone ClpB [Escherichia coli KTE91]
 gi|432810271|ref|ZP_20044150.1| chaperone ClpB [Escherichia coli KTE101]
 gi|432816317|ref|ZP_20050099.1| chaperone ClpB [Escherichia coli KTE115]
 gi|432828237|ref|ZP_20061859.1| chaperone ClpB [Escherichia coli KTE135]
 gi|432835543|ref|ZP_20069080.1| chaperone ClpB [Escherichia coli KTE136]
 gi|432840383|ref|ZP_20073847.1| chaperone ClpB [Escherichia coli KTE140]
 gi|432852575|ref|ZP_20082291.1| chaperone ClpB [Escherichia coli KTE144]
 gi|432863617|ref|ZP_20087499.1| chaperone ClpB [Escherichia coli KTE146]
 gi|432869988|ref|ZP_20090520.1| chaperone ClpB [Escherichia coli KTE147]
 gi|432876455|ref|ZP_20094373.1| chaperone ClpB [Escherichia coli KTE154]
 gi|432887649|ref|ZP_20101620.1| chaperone ClpB [Escherichia coli KTE158]
 gi|432905953|ref|ZP_20114717.1| chaperone ClpB [Escherichia coli KTE194]
 gi|432913821|ref|ZP_20119441.1| chaperone ClpB [Escherichia coli KTE190]
 gi|432920561|ref|ZP_20124196.1| chaperone ClpB [Escherichia coli KTE173]
 gi|432928158|ref|ZP_20129411.1| chaperone ClpB [Escherichia coli KTE175]
 gi|432935499|ref|ZP_20134840.1| chaperone ClpB [Escherichia coli KTE184]
 gi|432938973|ref|ZP_20137175.1| chaperone ClpB [Escherichia coli KTE183]
 gi|432948540|ref|ZP_20143591.1| chaperone ClpB [Escherichia coli KTE196]
 gi|432956173|ref|ZP_20147961.1| chaperone ClpB [Escherichia coli KTE197]
 gi|432962917|ref|ZP_20152387.1| chaperone ClpB [Escherichia coli KTE202]
 gi|432968667|ref|ZP_20157581.1| chaperone ClpB [Escherichia coli KTE203]
 gi|432972748|ref|ZP_20161613.1| chaperone ClpB [Escherichia coli KTE207]
 gi|432974744|ref|ZP_20163580.1| chaperone ClpB [Escherichia coli KTE209]
 gi|432981962|ref|ZP_20170736.1| chaperone ClpB [Escherichia coli KTE211]
 gi|432986307|ref|ZP_20175027.1| chaperone ClpB [Escherichia coli KTE215]
 gi|432991689|ref|ZP_20180353.1| chaperone ClpB [Escherichia coli KTE217]
 gi|432996299|ref|ZP_20184884.1| chaperone ClpB [Escherichia coli KTE218]
 gi|433000870|ref|ZP_20189393.1| chaperone ClpB [Escherichia coli KTE223]
 gi|433014869|ref|ZP_20203210.1| chaperone ClpB [Escherichia coli KTE104]
 gi|433019661|ref|ZP_20207852.1| chaperone ClpB [Escherichia coli KTE105]
 gi|433024443|ref|ZP_20212423.1| chaperone ClpB [Escherichia coli KTE106]
 gi|433034423|ref|ZP_20222130.1| chaperone ClpB [Escherichia coli KTE112]
 gi|433039594|ref|ZP_20227191.1| chaperone ClpB [Escherichia coli KTE113]
 gi|433044141|ref|ZP_20231634.1| chaperone ClpB [Escherichia coli KTE117]
 gi|433049008|ref|ZP_20236353.1| chaperone ClpB [Escherichia coli KTE120]
 gi|433054235|ref|ZP_20241407.1| chaperone ClpB [Escherichia coli KTE122]
 gi|433059078|ref|ZP_20246119.1| chaperone ClpB [Escherichia coli KTE124]
 gi|433064032|ref|ZP_20250948.1| chaperone ClpB [Escherichia coli KTE125]
 gi|433068881|ref|ZP_20255665.1| chaperone ClpB [Escherichia coli KTE128]
 gi|433078767|ref|ZP_20265293.1| chaperone ClpB [Escherichia coli KTE131]
 gi|433083503|ref|ZP_20269958.1| chaperone ClpB [Escherichia coli KTE133]
 gi|433088277|ref|ZP_20274645.1| chaperone ClpB [Escherichia coli KTE137]
 gi|433092963|ref|ZP_20279226.1| chaperone ClpB [Escherichia coli KTE138]
 gi|433097404|ref|ZP_20283586.1| chaperone ClpB [Escherichia coli KTE139]
 gi|433102131|ref|ZP_20288209.1| chaperone ClpB [Escherichia coli KTE145]
 gi|433106848|ref|ZP_20292819.1| chaperone ClpB [Escherichia coli KTE148]
 gi|433111824|ref|ZP_20297684.1| chaperone ClpB [Escherichia coli KTE150]
 gi|433116482|ref|ZP_20302270.1| chaperone ClpB [Escherichia coli KTE153]
 gi|433126152|ref|ZP_20311706.1| chaperone ClpB [Escherichia coli KTE160]
 gi|433131132|ref|ZP_20316565.1| chaperone ClpB [Escherichia coli KTE163]
 gi|433135799|ref|ZP_20321139.1| chaperone ClpB [Escherichia coli KTE166]
 gi|433140220|ref|ZP_20325472.1| chaperone ClpB [Escherichia coli KTE167]
 gi|433145192|ref|ZP_20330332.1| chaperone ClpB [Escherichia coli KTE168]
 gi|433150138|ref|ZP_20335154.1| chaperone ClpB [Escherichia coli KTE174]
 gi|433159637|ref|ZP_20344470.1| chaperone ClpB [Escherichia coli KTE177]
 gi|433174494|ref|ZP_20359012.1| chaperone ClpB [Escherichia coli KTE232]
 gi|433179426|ref|ZP_20363819.1| chaperone ClpB [Escherichia coli KTE82]
 gi|433189331|ref|ZP_20373426.1| chaperone ClpB [Escherichia coli KTE88]
 gi|433194648|ref|ZP_20378632.1| chaperone ClpB [Escherichia coli KTE90]
 gi|433199300|ref|ZP_20383194.1| chaperone ClpB [Escherichia coli KTE94]
 gi|433204261|ref|ZP_20388026.1| chaperone ClpB [Escherichia coli KTE95]
 gi|433213500|ref|ZP_20397089.1| chaperone ClpB [Escherichia coli KTE99]
 gi|433323021|ref|ZP_20400391.1| protein disaggregation chaperone [Escherichia coli J96]
 gi|433327005|ref|ZP_20403638.1| protein disaggregation chaperone [Escherichia coli J96]
 gi|442590621|ref|ZP_21009382.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
 gi|442599575|ref|ZP_21017288.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
 gi|442604746|ref|ZP_21019590.1| ClpB protein [Escherichia coli Nissle 1917]
 gi|443618647|ref|YP_007382503.1| protein disaggregation chaperone [Escherichia coli APEC O78]
 gi|444926153|ref|ZP_21245453.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
 gi|444931860|ref|ZP_21250904.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
 gi|444937311|ref|ZP_21256091.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
 gi|444942940|ref|ZP_21261461.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
 gi|444948426|ref|ZP_21266740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
 gi|444953971|ref|ZP_21272070.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
 gi|444959494|ref|ZP_21277350.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
 gi|444964602|ref|ZP_21282213.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
 gi|444970627|ref|ZP_21287993.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
 gi|444975912|ref|ZP_21293039.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
 gi|444981297|ref|ZP_21298211.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
 gi|444986692|ref|ZP_21303476.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
 gi|444992006|ref|ZP_21308652.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
 gi|444997317|ref|ZP_21313817.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
 gi|445002889|ref|ZP_21319281.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
 gi|445008328|ref|ZP_21324570.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
 gi|445013419|ref|ZP_21329529.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
 gi|445019288|ref|ZP_21335256.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
 gi|445024702|ref|ZP_21340529.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
 gi|445030078|ref|ZP_21345756.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
 gi|445035545|ref|ZP_21351080.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
 gi|445041170|ref|ZP_21356546.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
 gi|445046399|ref|ZP_21361652.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
 gi|445051913|ref|ZP_21366962.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
 gi|445057684|ref|ZP_21372545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
 gi|450220041|ref|ZP_21896286.1| protein disaggregation chaperone [Escherichia coli O08]
 gi|450247072|ref|ZP_21901086.1| protein disaggregation chaperone [Escherichia coli S17]
 gi|452967749|ref|ZP_21965976.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           EC4009]
 gi|54036848|sp|P63284.1|CLPB_ECOLI RecName: Full=Chaperone protein ClpB; AltName: Full=Heat shock
           protein F84.1
 gi|54036849|sp|P63285.1|CLPB_ECO57 RecName: Full=Chaperone protein ClpB
 gi|54036850|sp|P63286.1|CLPB_ECOL6 RecName: Full=Chaperone protein ClpB
 gi|1788943|gb|AAC75641.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. MG1655]
 gi|1799995|dbj|BAA16476.1| protein disaggregation chaperone [Escherichia coli str. K12 substr.
           W3110]
 gi|13362926|dbj|BAB36878.1| heat shock protein [Escherichia coli O157:H7 str. Sakai]
 gi|73856628|gb|AAZ89335.1| heat shock protein [Shigella sonnei Ss046]
 gi|81246456|gb|ABB67164.1| heat shock protein [Shigella boydii Sb227]
 gi|110344347|gb|ABG70584.1| ClpB protein [Escherichia coli 536]
 gi|157067748|gb|ABV07003.1| ATP-dependent chaperone protein ClpB [Escherichia coli HS]
 gi|157080262|gb|ABV19970.1| ATP-dependent chaperone protein ClpB [Escherichia coli E24377A]
 gi|169754057|gb|ACA76756.1| ATP-dependent chaperone ClpB [Escherichia coli ATCC 8739]
 gi|169890032|gb|ACB03739.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. DH10B]
 gi|170521698|gb|ACB19876.1| ATP-dependent chaperone protein ClpB [Escherichia coli SMS-3-5]
 gi|187770676|gb|EDU34520.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
 gi|188014008|gb|EDU52130.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
 gi|188487823|gb|EDU62926.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
 gi|189003333|gb|EDU72319.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
 gi|189354548|gb|EDU72967.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
 gi|189359601|gb|EDU78020.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
 gi|189367288|gb|EDU85704.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
 gi|189370894|gb|EDU89310.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
 gi|189376181|gb|EDU94597.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
 gi|190900892|gb|EDV60678.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
 gi|190905142|gb|EDV64786.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
 gi|192929286|gb|EDV82895.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
 gi|194411789|gb|EDX28110.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
 gi|194421696|gb|EDX37705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
 gi|208725798|gb|EDZ75399.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
 gi|208734329|gb|EDZ83016.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
 gi|208739428|gb|EDZ87110.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
 gi|209159195|gb|ACI36628.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4115]
 gi|209913328|dbj|BAG78402.1| ATP-dependent protease [Escherichia coli SE11]
 gi|215266003|emb|CAS10414.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217319111|gb|EEC27536.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
           TW14588]
 gi|218352949|emb|CAU98748.1| protein disaggregation chaperone [Escherichia coli 55989]
 gi|218361940|emb|CAQ99542.1| protein disaggregation chaperone [Escherichia coli IAI1]
 gi|218371090|emb|CAR18919.1| protein disaggregation chaperone [Escherichia coli IAI39]
 gi|218428275|emb|CAR09200.2| protein disaggregation chaperone [Escherichia coli ED1a]
 gi|218433191|emb|CAR14090.1| protein disaggregation chaperone [Escherichia coli UMN026]
 gi|238863301|gb|ACR65299.1| protein disaggregation chaperone [Escherichia coli BW2952]
 gi|242378188|emb|CAQ32963.1| ClpB chaperone [Escherichia coli BL21(DE3)]
 gi|253323556|gb|ACT28158.1| ATP-dependent chaperone ClpB [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974464|gb|ACT40135.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
 gi|253978631|gb|ACT44301.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
 gi|254593940|gb|ACT73301.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           TW14359]
 gi|257755331|dbj|BAI26833.1| protein disaggregation chaperone ClpB [Escherichia coli O26:H11
           str. 11368]
 gi|257760421|dbj|BAI31918.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
           str. 12009]
 gi|257765630|dbj|BAI37125.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
           str. 11128]
 gi|260448332|gb|ACX38754.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
 gi|281179640|dbj|BAI55970.1| ATP-dependent protease [Escherichia coli SE15]
 gi|284922540|emb|CBG35627.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
 gi|299880532|gb|EFI88743.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
 gi|305854526|gb|EFM54964.1| protein disaggregation chaperone [Escherichia coli NC101]
 gi|306905523|gb|EFN36057.1| ATP-dependent chaperone ClpB [Escherichia coli W]
 gi|307554607|gb|ADN47382.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
 gi|309702974|emb|CBJ02305.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
 gi|312289927|gb|EFR17815.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
 gi|315061907|gb|ADT76234.1| protein disaggregation chaperone [Escherichia coli W]
 gi|315137212|dbj|BAJ44371.1| heat shock protein [Escherichia coli DH1]
 gi|315615333|gb|EFU95967.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
 gi|320177085|gb|EFW52102.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
 gi|320182491|gb|EFW57385.1| ClpB protein [Shigella boydii ATCC 9905]
 gi|320185012|gb|EFW59794.1| ClpB protein [Shigella flexneri CDC 796-83]
 gi|320188931|gb|EFW63590.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
 gi|320194759|gb|EFW69388.1| ClpB protein [Escherichia coli WV_060327]
 gi|320198369|gb|EFW72971.1| ClpB protein [Escherichia coli EC4100B]
 gi|320640776|gb|EFX10274.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           G5101]
 gi|320646121|gb|EFX15066.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
           493-89]
 gi|320651418|gb|EFX19819.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
           2687]
 gi|320657023|gb|EFX24846.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662687|gb|EFX30031.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320667504|gb|EFX34428.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323156248|gb|EFZ42407.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
 gi|323177280|gb|EFZ62868.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
 gi|323184531|gb|EFZ69905.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
 gi|323377512|gb|ADX49780.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
 gi|323935612|gb|EGB31932.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
 gi|323941388|gb|EGB37572.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
 gi|323946279|gb|EGB42312.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
 gi|323960548|gb|EGB56177.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
 gi|323963902|gb|EGB59395.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
 gi|324120051|gb|EGC13927.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
 gi|325496334|gb|EGC94193.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
 gi|326344348|gb|EGD68106.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
 gi|326347717|gb|EGD71434.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
 gi|327252298|gb|EGE63970.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
 gi|330912357|gb|EGH40867.1| ClpB protein [Escherichia coli AA86]
 gi|331058616|gb|EGI30594.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
 gi|331063012|gb|EGI34925.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
 gi|331068775|gb|EGI40168.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
 gi|332344463|gb|AEE57797.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
 gi|333001158|gb|EGK20728.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
 gi|333015796|gb|EGK35133.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
 gi|333970692|gb|AEG37497.1| ClpB protein [Escherichia coli NA114]
 gi|339416185|gb|AEJ57857.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
 gi|340733532|gb|EGR62663.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           01-09591]
 gi|340739435|gb|EGR73670.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           LB226692]
 gi|342364116|gb|EGU28218.1| protein disaggregation chaperone [Escherichia coli XH140A]
 gi|344192237|gb|EGV46333.1| protein disaggregation chaperone [Escherichia coli XH001]
 gi|345334599|gb|EGW67041.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
 gi|345337104|gb|EGW69537.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
 gi|345349284|gb|EGW81571.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
 gi|345352423|gb|EGW84672.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
 gi|345357537|gb|EGW89731.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
 gi|345361095|gb|EGW93256.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
 gi|345369763|gb|EGX01744.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
 gi|345374492|gb|EGX06443.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
 gi|345386438|gb|EGX16271.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
 gi|345392748|gb|EGX22527.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
 gi|349739066|gb|AEQ13772.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
 gi|354862441|gb|EHF22879.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
 gi|354867725|gb|EHF28147.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
 gi|354868123|gb|EHF28541.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
 gi|354873722|gb|EHF34099.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
 gi|354880406|gb|EHF40742.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
 gi|354888530|gb|EHF48786.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
 gi|354892691|gb|EHF52897.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
 gi|354893758|gb|EHF53957.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|354896838|gb|EHF57005.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
 gi|354898532|gb|EHF58686.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|354912300|gb|EHF72301.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|354915256|gb|EHF75236.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|354917144|gb|EHF77113.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|359332897|dbj|BAL39344.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. MDS42]
 gi|371592087|gb|EHN81009.1| chaperone ClpB [Escherichia coli H494]
 gi|371606808|gb|EHN95399.1| chaperone ClpB [Escherichia coli E101]
 gi|371615394|gb|EHO03800.1| chaperone ClpB [Escherichia coli B093]
 gi|374359951|gb|AEZ41658.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
           RM12579]
 gi|375320531|gb|EHS66474.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
           T22]
 gi|377842710|gb|EHU07760.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
 gi|377842992|gb|EHU08035.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
 gi|377846545|gb|EHU11556.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
 gi|377855963|gb|EHU20825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
 gi|377862695|gb|EHU27503.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
 gi|377876581|gb|EHU41181.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
 gi|377889074|gb|EHU53541.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
 gi|377894379|gb|EHU58801.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
 gi|377903360|gb|EHU67656.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
 gi|377903368|gb|EHU67661.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
 gi|377910932|gb|EHU75115.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
 gi|377911230|gb|EHU75404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
 gi|377924761|gb|EHU88702.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
 gi|377926892|gb|EHU90819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
 gi|377935034|gb|EHU98857.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
 gi|377938729|gb|EHV02494.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
 gi|377941241|gb|EHV04985.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
 gi|377946132|gb|EHV09819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
 gi|377952146|gb|EHV15747.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
 gi|377965090|gb|EHV28518.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
 gi|377973637|gb|EHV36974.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
 gi|377974765|gb|EHV38091.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
 gi|377982172|gb|EHV45424.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
 gi|377991404|gb|EHV54555.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
 gi|377993350|gb|EHV56487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
 gi|377995518|gb|EHV58634.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
 gi|378006522|gb|EHV69500.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
 gi|378015305|gb|EHV78202.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
 gi|378022804|gb|EHV85487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
 gi|378027627|gb|EHV90253.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
 gi|378031946|gb|EHV94528.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
 gi|378039355|gb|EHW01848.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
 gi|378052270|gb|EHW14579.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
 gi|378052552|gb|EHW14856.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
 gi|378074646|gb|EHW36679.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
 gi|378076171|gb|EHW38183.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
 gi|378083065|gb|EHW45001.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
 gi|378093516|gb|EHW55322.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
 gi|378099275|gb|EHW60983.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
 gi|378104890|gb|EHW66542.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
 gi|378115525|gb|EHW77064.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
 gi|378128356|gb|EHW89738.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
 gi|378129125|gb|EHW90501.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
 gi|378130260|gb|EHW91628.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
 gi|378140640|gb|EHX01863.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
 gi|378147456|gb|EHX08603.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
 gi|378157016|gb|EHX18060.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
 gi|378164351|gb|EHX25297.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
 gi|378168579|gb|EHX29483.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
 gi|378168939|gb|EHX29840.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
 gi|378180553|gb|EHX41234.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
 gi|378185028|gb|EHX45660.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
 gi|378187001|gb|EHX47621.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
 gi|378215991|gb|EHX76281.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
 gi|378218075|gb|EHX78347.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
 gi|378227090|gb|EHX87267.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
 gi|378230377|gb|EHX90496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
 gi|378236556|gb|EHX96601.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
 gi|378243815|gb|EHY03761.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
 gi|378252827|gb|EHY12705.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
 gi|378258568|gb|EHY18385.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
 gi|380347350|gb|EIA35638.1| protein disaggregation chaperone [Escherichia coli SCI-07]
 gi|383104021|gb|AFG41530.1| Chaperone protein clpB [Escherichia coli P12b]
 gi|383391992|gb|AFH16950.1| protein disaggregation chaperone [Escherichia coli KO11FL]
 gi|383406171|gb|AFH12414.1| protein disaggregation chaperone [Escherichia coli W]
 gi|384380825|gb|EIE38691.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
 gi|384470764|gb|EIE54862.1| protein disaggregation chaperone [Escherichia coli AI27]
 gi|385537254|gb|EIF84136.1| chaperone ClpB [Escherichia coli M919]
 gi|385707147|gb|EIG44179.1| chaperone ClpB [Escherichia coli H730]
 gi|385711187|gb|EIG48147.1| chaperone ClpB [Escherichia coli B799]
 gi|386121213|gb|EIG69830.1| chaperone ClpB [Escherichia sp. 4_1_40B]
 gi|386140943|gb|EIG82095.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
 gi|386147873|gb|EIG94313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
 gi|386153382|gb|EIH04671.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
 gi|386160309|gb|EIH22120.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
 gi|386167684|gb|EIH34200.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
 gi|386171607|gb|EIH43646.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
 gi|386177531|gb|EIH55010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
 gi|386183017|gb|EIH65768.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
 gi|386192481|gb|EIH81205.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
 gi|386194077|gb|EIH88338.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
 gi|386201951|gb|EII00942.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
 gi|386204519|gb|EII09030.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
 gi|386218201|gb|EII34684.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
 gi|386224215|gb|EII46558.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
 gi|386227619|gb|EII54975.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
 gi|386236503|gb|EII68479.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
 gi|386254601|gb|EIJ04291.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
 gi|386256623|gb|EIJ12117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
           (10e)]
 gi|388334874|gb|EIL01454.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9534]
 gi|388335556|gb|EIL02116.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
           CVM9450]
 gi|388336442|gb|EIL02985.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
           CVM9340]
 gi|388354959|gb|EIL19831.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9574]
 gi|388361811|gb|EIL25885.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9570]
 gi|388366891|gb|EIL30600.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9545]
 gi|388368482|gb|EIL32113.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM9942]
 gi|388379915|gb|EIL42545.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
 gi|388397947|gb|EIL58901.1| protein disaggregation chaperone [Escherichia coli 541-15]
 gi|388406100|gb|EIL66511.1| protein disaggregation chaperone [Escherichia coli 75]
 gi|388408493|gb|EIL68837.1| protein disaggregation chaperone [Escherichia coli 576-1]
 gi|388421160|gb|EIL80781.1| protein disaggregation chaperone [Escherichia coli CUMT8]
 gi|390640873|gb|EIN20317.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
 gi|390642395|gb|EIN21793.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
 gi|390643356|gb|EIN22710.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
 gi|390659773|gb|EIN37521.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
 gi|390661066|gb|EIN38738.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
 gi|390662860|gb|EIN40396.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
 gi|390676582|gb|EIN52672.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
 gi|390679827|gb|EIN55693.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
 gi|390683118|gb|EIN58832.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
 gi|390695597|gb|EIN70116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
 gi|390700139|gb|EIN74460.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
 gi|390700597|gb|EIN74890.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
 gi|390713745|gb|EIN86673.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
 gi|390721880|gb|EIN94573.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
 gi|390723387|gb|EIN95983.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
 gi|390726355|gb|EIN98805.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
 gi|390741481|gb|EIO12548.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
 gi|390741941|gb|EIO12968.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
 gi|390744542|gb|EIO15398.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
 gi|390757407|gb|EIO26891.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
 gi|390766404|gb|EIO35526.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
 gi|390767719|gb|EIO36786.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
 gi|390768138|gb|EIO37181.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
 gi|390780798|gb|EIO48492.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
 gi|390786853|gb|EIO54355.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
 gi|390789740|gb|EIO57184.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
 gi|390802310|gb|EIO69351.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
 gi|390804600|gb|EIO71558.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
 gi|390807166|gb|EIO74068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
 gi|390815319|gb|EIO81854.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
 gi|390825299|gb|EIO91234.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
 gi|390829325|gb|EIO94927.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
 gi|390830191|gb|EIO95751.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
 gi|390845553|gb|EIP09187.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
 gi|390845736|gb|EIP09363.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
 gi|390850018|gb|EIP13414.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
 gi|390870013|gb|EIP31586.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
 gi|390877881|gb|EIP38772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
 gi|390883127|gb|EIP43584.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
 gi|390892599|gb|EIP52174.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
 gi|390895117|gb|EIP54598.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
 gi|390897356|gb|EIP56691.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
 gi|390907430|gb|EIP66293.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
 gi|390918506|gb|EIP76903.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
 gi|390919698|gb|EIP78023.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
 gi|391283665|gb|EIQ42280.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
 gi|391304571|gb|EIQ62380.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
 gi|394383682|gb|EJE61272.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9602]
 gi|394384190|gb|EJE61757.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10224]
 gi|394399883|gb|EJE75853.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9634]
 gi|394400710|gb|EJE76622.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9553]
 gi|394402890|gb|EJE78574.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10021]
 gi|394408132|gb|EJE82854.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9455]
 gi|394414750|gb|EJE88672.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10030]
 gi|394420119|gb|EJE93671.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM9952]
 gi|397784398|gb|EJK95252.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
 gi|397898400|gb|EJL14784.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
 gi|404290464|gb|EEH71314.2| chaperone ClpB [Escherichia sp. 1_1_43]
 gi|406776579|gb|AFS56003.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2009EL-2050]
 gi|407053148|gb|AFS73199.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2011C-3493]
 gi|407066522|gb|AFS87569.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2009EL-2071]
 gi|408065418|gb|EKG99892.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
 gi|408066055|gb|EKH00519.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
 gi|408078498|gb|EKH12650.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
 gi|408082392|gb|EKH16375.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
 gi|408096980|gb|EKH29894.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
 gi|408103486|gb|EKH35832.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
 gi|408108044|gb|EKH40082.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
 gi|408120379|gb|EKH51376.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
 gi|408126922|gb|EKH57449.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
 gi|408137165|gb|EKH66879.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
 gi|408139500|gb|EKH69110.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
 gi|408145583|gb|EKH74742.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
 gi|408154477|gb|EKH82818.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
 gi|408159346|gb|EKH87418.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
 gi|408163120|gb|EKH91000.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
 gi|408172759|gb|EKH99813.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
 gi|408179519|gb|EKI06179.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
 gi|408182301|gb|EKI08817.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
 gi|408192674|gb|EKI18244.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
 gi|408201192|gb|EKI26354.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
 gi|408217080|gb|EKI41366.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
 gi|408226599|gb|EKI50233.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
 gi|408227563|gb|EKI51146.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
 gi|408241828|gb|EKI64439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
 gi|408246116|gb|EKI68425.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
 gi|408254867|gb|EKI76335.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
 gi|408258402|gb|EKI79668.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
 gi|408264914|gb|EKI85679.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
 gi|408273621|gb|EKI93673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
 gi|408276539|gb|EKI96438.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
 gi|408285691|gb|EKJ04683.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
 gi|408290482|gb|EKJ09195.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
 gi|408295458|gb|EKJ13772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
 gi|408303668|gb|EKJ21122.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
 gi|408307246|gb|EKJ24589.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
 gi|408318093|gb|EKJ34309.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
 gi|408324292|gb|EKJ40226.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
 gi|408325685|gb|EKJ41541.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
 gi|408335945|gb|EKJ50755.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
 gi|408342856|gb|EKJ57270.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
 gi|408345643|gb|EKJ59958.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
 gi|408456596|gb|EKJ80409.1| protein disaggregation chaperone [Escherichia coli AD30]
 gi|408545467|gb|EKK22897.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
 gi|408549014|gb|EKK26382.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
 gi|408567358|gb|EKK43417.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
 gi|408568063|gb|EKK44102.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
 gi|408568197|gb|EKK44234.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
 gi|408578176|gb|EKK53705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
 gi|408580682|gb|EKK56069.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
 gi|408590902|gb|EKK65363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
 gi|408595822|gb|EKK70028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
 gi|408600548|gb|EKK74389.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
 gi|408612015|gb|EKK85363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
 gi|412963953|emb|CCK47879.1| heat shock protein [Escherichia coli chi7122]
 gi|412970446|emb|CCJ45092.1| heat shock protein [Escherichia coli]
 gi|421936383|gb|EKT94047.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CFSAN001632]
 gi|421939968|gb|EKT97456.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CFSAN001629]
 gi|421944373|gb|EKU01633.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CFSAN001630]
 gi|427204151|gb|EKV74434.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
 gi|427206034|gb|EKV76261.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
 gi|427208023|gb|EKV78176.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
 gi|427220326|gb|EKV89252.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
 gi|427223700|gb|EKV92431.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
 gi|427227468|gb|EKV96019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
 gi|427241215|gb|EKW08657.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
 gi|427241593|gb|EKW09019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
 gi|427245213|gb|EKW12509.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
 gi|427260080|gb|EKW26078.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
 gi|427264041|gb|EKW29740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
 gi|427275876|gb|EKW40469.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
 gi|427282427|gb|EKW46677.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
 gi|427291326|gb|EKW54740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
 gi|427298443|gb|EKW61445.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
 gi|427299919|gb|EKW62880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
 gi|427311752|gb|EKW73928.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
 gi|427314740|gb|EKW76771.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
 gi|427319003|gb|EKW80837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
 gi|427327344|gb|EKW88737.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
 gi|427328670|gb|EKW90028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
 gi|429253084|gb|EKY37580.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
 gi|429254795|gb|EKY39162.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
 gi|429348329|gb|EKY85099.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
 gi|429359075|gb|EKY95741.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
 gi|429361406|gb|EKY98061.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
 gi|429361713|gb|EKY98366.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429364353|gb|EKZ00973.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
 gi|429375202|gb|EKZ11740.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
 gi|429376359|gb|EKZ12888.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
 gi|429378668|gb|EKZ15176.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
 gi|429379532|gb|EKZ16032.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
 gi|429390667|gb|EKZ27076.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
 gi|429406135|gb|EKZ42396.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429409054|gb|EKZ45285.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429413384|gb|EKZ49571.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429416528|gb|EKZ52683.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429420238|gb|EKZ56368.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429428129|gb|EKZ64208.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429431551|gb|EKZ67598.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429436661|gb|EKZ72677.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429437565|gb|EKZ73568.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429447235|gb|EKZ83159.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429451488|gb|EKZ87379.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429456748|gb|EKZ92592.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
 gi|430874323|gb|ELB97880.1| chaperone ClpB [Escherichia coli KTE2]
 gi|430883700|gb|ELC06674.1| chaperone ClpB [Escherichia coli KTE10]
 gi|430897818|gb|ELC20012.1| chaperone ClpB [Escherichia coli KTE12]
 gi|430905160|gb|ELC26835.1| chaperone ClpB [Escherichia coli KTE16]
 gi|430906999|gb|ELC28503.1| chaperone ClpB [Escherichia coli KTE15]
 gi|430914786|gb|ELC35881.1| chaperone ClpB [Escherichia coli KTE25]
 gi|430924187|gb|ELC44909.1| chaperone ClpB [Escherichia coli KTE21]
 gi|430924628|gb|ELC45313.1| chaperone ClpB [Escherichia coli KTE26]
 gi|430928806|gb|ELC49337.1| chaperone ClpB [Escherichia coli KTE28]
 gi|430934408|gb|ELC54770.1| chaperone ClpB [Escherichia coli KTE39]
 gi|430938174|gb|ELC58417.1| chaperone ClpB [Escherichia coli KTE44]
 gi|430943395|gb|ELC63508.1| chaperone ClpB [Escherichia coli KTE178]
 gi|430954358|gb|ELC73230.1| chaperone ClpB [Escherichia coli KTE181]
 gi|430962645|gb|ELC80502.1| chaperone ClpB [Escherichia coli KTE188]
 gi|430965485|gb|ELC82903.1| chaperone ClpB [Escherichia coli KTE189]
 gi|430973433|gb|ELC90401.1| chaperone ClpB [Escherichia coli KTE191]
 gi|430979217|gb|ELC96003.1| chaperone ClpB [Escherichia coli KTE193]
 gi|430981147|gb|ELC97879.1| chaperone ClpB [Escherichia coli KTE201]
 gi|430988061|gb|ELD04562.1| chaperone ClpB [Escherichia coli KTE204]
 gi|430996977|gb|ELD13245.1| chaperone ClpB [Escherichia coli KTE206]
 gi|431004123|gb|ELD19351.1| chaperone ClpB [Escherichia coli KTE208]
 gi|431015033|gb|ELD28592.1| chaperone ClpB [Escherichia coli KTE212]
 gi|431019262|gb|ELD32664.1| chaperone ClpB [Escherichia coli KTE213]
 gi|431023908|gb|ELD37103.1| chaperone ClpB [Escherichia coli KTE214]
 gi|431027660|gb|ELD40717.1| chaperone ClpB [Escherichia coli KTE216]
 gi|431037409|gb|ELD48392.1| chaperone ClpB [Escherichia coli KTE220]
 gi|431041280|gb|ELD51811.1| chaperone ClpB [Escherichia coli KTE224]
 gi|431050018|gb|ELD59777.1| chaperone ClpB [Escherichia coli KTE228]
 gi|431050645|gb|ELD60384.1| chaperone ClpB [Escherichia coli KTE230]
 gi|431059324|gb|ELD68682.1| chaperone ClpB [Escherichia coli KTE234]
 gi|431062621|gb|ELD71885.1| chaperone ClpB [Escherichia coli KTE233]
 gi|431068692|gb|ELD77166.1| chaperone ClpB [Escherichia coli KTE235]
 gi|431073596|gb|ELD81238.1| chaperone ClpB [Escherichia coli KTE236]
 gi|431078889|gb|ELD85868.1| chaperone ClpB [Escherichia coli KTE237]
 gi|431082715|gb|ELD89027.1| chaperone ClpB [Escherichia coli KTE47]
 gi|431090181|gb|ELD95951.1| chaperone ClpB [Escherichia coli KTE49]
 gi|431092570|gb|ELD98261.1| chaperone ClpB [Escherichia coli KTE51]
 gi|431098769|gb|ELE04075.1| chaperone ClpB [Escherichia coli KTE53]
 gi|431114090|gb|ELE17642.1| chaperone ClpB [Escherichia coli KTE56]
 gi|431126882|gb|ELE29223.1| chaperone ClpB [Escherichia coli KTE60]
 gi|431137420|gb|ELE39267.1| chaperone ClpB [Escherichia coli KTE67]
 gi|431140270|gb|ELE42044.1| chaperone ClpB [Escherichia coli KTE66]
 gi|431147630|gb|ELE48984.1| chaperone ClpB [Escherichia coli KTE72]
 gi|431152924|gb|ELE53844.1| chaperone ClpB [Escherichia coli KTE75]
 gi|431158219|gb|ELE58837.1| chaperone ClpB [Escherichia coli KTE76]
 gi|431162309|gb|ELE62759.1| chaperone ClpB [Escherichia coli KTE77]
 gi|431169228|gb|ELE69449.1| chaperone ClpB [Escherichia coli KTE80]
 gi|431169930|gb|ELE70144.1| chaperone ClpB [Escherichia coli KTE81]
 gi|431179497|gb|ELE79397.1| chaperone ClpB [Escherichia coli KTE86]
 gi|431180932|gb|ELE80808.1| chaperone ClpB [Escherichia coli KTE83]
 gi|431189556|gb|ELE88977.1| chaperone ClpB [Escherichia coli KTE87]
 gi|431189973|gb|ELE89389.1| chaperone ClpB [Escherichia coli KTE93]
 gi|431198760|gb|ELE97543.1| chaperone ClpB [Escherichia coli KTE111]
 gi|431199842|gb|ELE98569.1| chaperone ClpB [Escherichia coli KTE116]
 gi|431209975|gb|ELF08042.1| chaperone ClpB [Escherichia coli KTE119]
 gi|431213521|gb|ELF11395.1| chaperone ClpB [Escherichia coli KTE142]
 gi|431219520|gb|ELF16916.1| chaperone ClpB [Escherichia coli KTE143]
 gi|431220903|gb|ELF18232.1| chaperone ClpB [Escherichia coli KTE156]
 gi|431233024|gb|ELF28622.1| chaperone ClpB [Escherichia coli KTE162]
 gi|431238051|gb|ELF32991.1| chaperone ClpB [Escherichia coli KTE161]
 gi|431242251|gb|ELF36672.1| chaperone ClpB [Escherichia coli KTE171]
 gi|431242452|gb|ELF36869.1| chaperone ClpB [Escherichia coli KTE169]
 gi|431255423|gb|ELF48676.1| chaperone ClpB [Escherichia coli KTE8]
 gi|431256994|gb|ELF49924.1| chaperone ClpB [Escherichia coli KTE6]
 gi|431261505|gb|ELF53539.1| chaperone ClpB [Escherichia coli KTE9]
 gi|431264650|gb|ELF56355.1| chaperone ClpB [Escherichia coli KTE17]
 gi|431272401|gb|ELF63503.1| chaperone ClpB [Escherichia coli KTE18]
 gi|431274084|gb|ELF65148.1| chaperone ClpB [Escherichia coli KTE45]
 gi|431280926|gb|ELF71834.1| chaperone ClpB [Escherichia coli KTE42]
 gi|431282813|gb|ELF73687.1| chaperone ClpB [Escherichia coli KTE23]
 gi|431290737|gb|ELF81268.1| chaperone ClpB [Escherichia coli KTE43]
 gi|431295668|gb|ELF85401.1| chaperone ClpB [Escherichia coli KTE29]
 gi|431306883|gb|ELF95185.1| chaperone ClpB [Escherichia coli KTE46]
 gi|431309349|gb|ELF97549.1| chaperone ClpB [Escherichia coli KTE48]
 gi|431314008|gb|ELG01963.1| chaperone ClpB [Escherichia coli KTE50]
 gi|431317134|gb|ELG04916.1| chaperone ClpB [Escherichia coli KTE54]
 gi|431328930|gb|ELG16234.1| chaperone ClpB [Escherichia coli KTE63]
 gi|431338743|gb|ELG25819.1| chaperone ClpB [Escherichia coli KTE78]
 gi|431350931|gb|ELG37732.1| chaperone ClpB [Escherichia coli KTE79]
 gi|431354165|gb|ELG40904.1| chaperone ClpB [Escherichia coli KTE91]
 gi|431361324|gb|ELG47915.1| chaperone ClpB [Escherichia coli KTE101]
 gi|431363452|gb|ELG50013.1| chaperone ClpB [Escherichia coli KTE115]
 gi|431384371|gb|ELG68427.1| chaperone ClpB [Escherichia coli KTE135]
 gi|431384440|gb|ELG68492.1| chaperone ClpB [Escherichia coli KTE136]
 gi|431387893|gb|ELG71698.1| chaperone ClpB [Escherichia coli KTE140]
 gi|431399103|gb|ELG82515.1| chaperone ClpB [Escherichia coli KTE144]
 gi|431403787|gb|ELG87053.1| chaperone ClpB [Escherichia coli KTE146]
 gi|431409810|gb|ELG92980.1| chaperone ClpB [Escherichia coli KTE147]
 gi|431415458|gb|ELG98000.1| chaperone ClpB [Escherichia coli KTE158]
 gi|431419496|gb|ELH01845.1| chaperone ClpB [Escherichia coli KTE154]
 gi|431431290|gb|ELH13067.1| chaperone ClpB [Escherichia coli KTE194]
 gi|431438678|gb|ELH20051.1| chaperone ClpB [Escherichia coli KTE190]
 gi|431441763|gb|ELH22871.1| chaperone ClpB [Escherichia coli KTE173]
 gi|431443123|gb|ELH24201.1| chaperone ClpB [Escherichia coli KTE175]
 gi|431452017|gb|ELH32468.1| chaperone ClpB [Escherichia coli KTE184]
 gi|431456101|gb|ELH36446.1| chaperone ClpB [Escherichia coli KTE196]
 gi|431462584|gb|ELH42794.1| chaperone ClpB [Escherichia coli KTE183]
 gi|431466555|gb|ELH46574.1| chaperone ClpB [Escherichia coli KTE197]
 gi|431470083|gb|ELH50007.1| chaperone ClpB [Escherichia coli KTE203]
 gi|431472383|gb|ELH52272.1| chaperone ClpB [Escherichia coli KTE202]
 gi|431480655|gb|ELH60373.1| chaperone ClpB [Escherichia coli KTE207]
 gi|431487782|gb|ELH67425.1| chaperone ClpB [Escherichia coli KTE209]
 gi|431490475|gb|ELH70087.1| chaperone ClpB [Escherichia coli KTE211]
 gi|431495771|gb|ELH75357.1| chaperone ClpB [Escherichia coli KTE217]
 gi|431498854|gb|ELH78038.1| chaperone ClpB [Escherichia coli KTE215]
 gi|431504081|gb|ELH82811.1| chaperone ClpB [Escherichia coli KTE218]
 gi|431507559|gb|ELH85843.1| chaperone ClpB [Escherichia coli KTE223]
 gi|431529587|gb|ELI06285.1| chaperone ClpB [Escherichia coli KTE104]
 gi|431529629|gb|ELI06325.1| chaperone ClpB [Escherichia coli KTE105]
 gi|431534093|gb|ELI10582.1| chaperone ClpB [Escherichia coli KTE106]
 gi|431549278|gb|ELI23361.1| chaperone ClpB [Escherichia coli KTE112]
 gi|431550430|gb|ELI24422.1| chaperone ClpB [Escherichia coli KTE113]
 gi|431555156|gb|ELI29012.1| chaperone ClpB [Escherichia coli KTE117]
 gi|431563643|gb|ELI36847.1| chaperone ClpB [Escherichia coli KTE120]
 gi|431568097|gb|ELI41086.1| chaperone ClpB [Escherichia coli KTE124]
 gi|431569328|gb|ELI42282.1| chaperone ClpB [Escherichia coli KTE122]
 gi|431580227|gb|ELI52791.1| chaperone ClpB [Escherichia coli KTE125]
 gi|431582551|gb|ELI54569.1| chaperone ClpB [Escherichia coli KTE128]
 gi|431595513|gb|ELI65507.1| chaperone ClpB [Escherichia coli KTE131]
 gi|431600784|gb|ELI70450.1| chaperone ClpB [Escherichia coli KTE133]
 gi|431603838|gb|ELI73259.1| chaperone ClpB [Escherichia coli KTE137]
 gi|431609405|gb|ELI78727.1| chaperone ClpB [Escherichia coli KTE138]
 gi|431614621|gb|ELI83761.1| chaperone ClpB [Escherichia coli KTE139]
 gi|431617973|gb|ELI86956.1| chaperone ClpB [Escherichia coli KTE145]
 gi|431625959|gb|ELI94512.1| chaperone ClpB [Escherichia coli KTE148]
 gi|431627373|gb|ELI95780.1| chaperone ClpB [Escherichia coli KTE150]
 gi|431632983|gb|ELJ01266.1| chaperone ClpB [Escherichia coli KTE153]
 gi|431643348|gb|ELJ11045.1| chaperone ClpB [Escherichia coli KTE160]
 gi|431645363|gb|ELJ12919.1| chaperone ClpB [Escherichia coli KTE163]
 gi|431655297|gb|ELJ22331.1| chaperone ClpB [Escherichia coli KTE166]
 gi|431658892|gb|ELJ25800.1| chaperone ClpB [Escherichia coli KTE167]
 gi|431660628|gb|ELJ27496.1| chaperone ClpB [Escherichia coli KTE168]
 gi|431669569|gb|ELJ35988.1| chaperone ClpB [Escherichia coli KTE174]
 gi|431676528|gb|ELJ42645.1| chaperone ClpB [Escherichia coli KTE177]
 gi|431690895|gb|ELJ56363.1| chaperone ClpB [Escherichia coli KTE232]
 gi|431699970|gb|ELJ64958.1| chaperone ClpB [Escherichia coli KTE82]
 gi|431704983|gb|ELJ69606.1| chaperone ClpB [Escherichia coli KTE88]
 gi|431714776|gb|ELJ78953.1| chaperone ClpB [Escherichia coli KTE90]
 gi|431719711|gb|ELJ83762.1| chaperone ClpB [Escherichia coli KTE95]
 gi|431719928|gb|ELJ83964.1| chaperone ClpB [Escherichia coli KTE94]
 gi|431733804|gb|ELJ97209.1| chaperone ClpB [Escherichia coli KTE99]
 gi|432345136|gb|ELL39657.1| protein disaggregation chaperone [Escherichia coli J96]
 gi|432348189|gb|ELL42640.1| protein disaggregation chaperone [Escherichia coli J96]
 gi|441609076|emb|CCP95295.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
 gi|441651585|emb|CCQ02785.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
 gi|441714329|emb|CCQ05567.1| ClpB protein [Escherichia coli Nissle 1917]
 gi|443423155|gb|AGC88059.1| protein disaggregation chaperone [Escherichia coli APEC O78]
 gi|444537635|gb|ELV17552.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
 gi|444539174|gb|ELV18955.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
 gi|444547063|gb|ELV25699.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
 gi|444556894|gb|ELV34271.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
 gi|444557506|gb|ELV34839.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
 gi|444562805|gb|ELV39846.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
 gi|444572407|gb|ELV48836.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
 gi|444576359|gb|ELV52545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
 gi|444578805|gb|ELV54837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
 gi|444592734|gb|ELV67980.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
 gi|444592782|gb|ELV68023.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
 gi|444594598|gb|ELV69763.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
 gi|444605840|gb|ELV80470.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
 gi|444606504|gb|ELV81116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
 gi|444615131|gb|ELV89343.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
 gi|444622501|gb|ELV96453.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
 gi|444623394|gb|ELV97316.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
 gi|444629157|gb|ELW02870.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
 gi|444637976|gb|ELW11332.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
 gi|444640430|gb|ELW13694.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
 gi|444644716|gb|ELW17818.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
 gi|444653791|gb|ELW26495.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
 gi|444659179|gb|ELW31606.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
 gi|444663627|gb|ELW35842.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
 gi|444669329|gb|ELW41316.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
 gi|449316769|gb|EMD06874.1| protein disaggregation chaperone [Escherichia coli O08]
 gi|449318506|gb|EMD08572.1| protein disaggregation chaperone [Escherichia coli S17]
          Length = 857

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|440682733|ref|YP_007157528.1| ATP-dependent chaperone ClpB [Anabaena cylindrica PCC 7122]
 gi|428679852|gb|AFZ58618.1| ATP-dependent chaperone ClpB [Anabaena cylindrica PCC 7122]
          Length = 872

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 120/325 (36%), Positives = 194/325 (59%), Gaps = 28/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   LE  L  R+VGQ  A+  ++ AI+R   G +D + P+  F+FLG +G+GKT
Sbjct: 559 ESEKEKLLHLEDELHHRVVGQAEAVTAVADAIQRSRAGLSDPNRPIASFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +E+ +R+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKALAAYMF-DTEESLVRIDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTEAIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  + LQ+ D+GR+TD +G+TI+ K+ I +MTSN+ S    Q+ L 
Sbjct: 678 AVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGRTIDFKNCIIIMTSNIGS----QYILD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  +   + +                       H V   ++  F R EFL R++E + F 
Sbjct: 734 VAGDDSRYDEMR---------------------HRVMEAMRGSF-RPEFLNRVDEFIIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              KSEL  +V  +++   ++  D+     + D  ++ +   GYD  +GAR +K  ++R+
Sbjct: 772 SLQKSELRQIVQLQVDRLRQRLSDRKMSLRLSDYALDFLAEVGYDPVFGARPLKRAIQRE 831

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + +Q+A A  +     G  + + VQ
Sbjct: 832 LETQIAKAILRGEFNDGDTIFVDVQ 856


>gi|319901560|ref|YP_004161288.1| ATP-dependent chaperone ClpB [Bacteroides helcogenes P 36-108]
 gi|319416591|gb|ADV43702.1| ATP-dependent chaperone ClpB [Bacteroides helcogenes P 36-108]
          Length = 864

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 117/298 (39%), Positives = 184/298 (61%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQE AI  +S A++R   G  D   P+  FLFLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQEEAIEAVSDAVRRSRAGLQDPKRPIGSFLFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +V+LFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVILFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S  I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNMGSGYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K  GSN +       K+ +   +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLNGSNKEEVTEETKKEVM--NMLKKTI-RPEFLNRIDETIMFLPLTEKEIRQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +  L  + +++ + D  ++ +   GYD  +GAR +K  ++  +++ L+
Sbjct: 779 IVVLQIK-SVQNMLSGNGVDLALTDSAIDFLANTGYDPEFGARPVKRAIQHYLLNDLS 835


>gi|221198590|ref|ZP_03571635.1| negative regulator of genetic competence ClpC/mecB [Burkholderia
           multivorans CGD2M]
 gi|221207820|ref|ZP_03580827.1| ATPase family associated with various cellular activities (AAA)
           protein [Burkholderia multivorans CGD2]
 gi|221172317|gb|EEE04757.1| ATPase family associated with various cellular activities (AAA)
           protein [Burkholderia multivorans CGD2]
 gi|221181041|gb|EEE13443.1| negative regulator of genetic competence ClpC/mecB [Burkholderia
           multivorans CGD2M]
          Length = 953

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 201/331 (60%), Gaps = 27/331 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R+VGQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVVGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAESVFGDE-QAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREELMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ +  +E +   GY   +GAR +K +V + +
Sbjct: 791 LSKENIRSIVQIQLDRVVRTAAAQDIQLVMGESLIEHLTEAGYQPEFGARELKRQVRQTI 850

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
            ++LA       +  G   R+ V + K+  E
Sbjct: 851 ETRLAKEILADALKSGD--RVEVDYDKDRGE 879


>gi|218547885|ref|YP_002381676.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
           35469]
 gi|422807810|ref|ZP_16856238.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
 gi|218355426|emb|CAQ88034.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
           35469]
 gi|324111233|gb|EGC05215.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
          Length = 857

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|420338046|ref|ZP_14839608.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
 gi|391259920|gb|EIQ18994.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
          Length = 823

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 499 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 556

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 557 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 615

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 616 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 675

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 676 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 710

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I    +V  
Sbjct: 711 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEVLK 767

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
           +L++ GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 768 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 821


>gi|427717076|ref|YP_007065070.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 7507]
 gi|427349512|gb|AFY32236.1| ATP-dependent chaperone ClpB [Calothrix sp. PCC 7507]
          Length = 871

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 121/325 (37%), Positives = 192/325 (59%), Gaps = 28/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   LE  L  R+VGQ  A+  ++ AI+R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 ESEKEKLLHLEDELHHRVVGQSEAVTAVADAIQRSRAGLADPNRPIASFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D ++A +R+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKALAAYMF-DTEDALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  + LQ+ D+GR+TD +G  ++ K+AI +MTSN+ S    Q+ L 
Sbjct: 678 AVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHKVDFKNAIIIMTSNIGS----QYILD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  +   + +                       H V   ++  F R EFL RI+EI+ F 
Sbjct: 734 VAGDDSSYDE---------------------MQHRVMEAMRNSF-RPEFLNRIDEIIIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              K EL  +V  +++   K+  D+     + D  ++ +   GYD  +GAR +K  ++R+
Sbjct: 772 TLQKQELRRIVLLQVDRLRKRLTDRKMSLKLSDSALDFLAEVGYDPVFGARPLKRAIQRE 831

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + +Q+A A  +     G  + + VQ
Sbjct: 832 LETQIAKAILRGDFNDGDTIFVDVQ 856


>gi|371775835|ref|ZP_09482157.1| ATP-dependent chaperone ClpB [Anaerophaga sp. HS1]
          Length = 861

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/374 (36%), Positives = 220/374 (58%), Gaps = 38/374 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGAD-----PTVKDNSGHIPSDYAEDANIKQILQKYAEKY 245
           + L YG +    E +E L K  ++     P +K+         AED  + QI+ ++    
Sbjct: 492 AELRYGRIKEANETIERLKKELSERQADRPMIKEEVD------AED--VAQIVSRWT--G 541

Query: 246 ADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLG 304
             + R  ++E ++   LE  L  R++GQE AI  ++ A++R   G  D   P+  F+FLG
Sbjct: 542 IPVTRMLQSERQKLLNLEVELHKRVIGQEEAIAAVADAVRRSRAGLQDARRPIGSFIFLG 601

Query: 305 SSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTK 364
            +G+GKTELA+ LA ++  D+ +   R+DMSEYQE+H V++LIGAPPGY+G+D+GGQLT+
Sbjct: 602 MTGVGKTELARALAEFLFNDE-DLMTRIDMSEYQERHSVSRLIGAPPGYVGYDEGGQLTE 660

Query: 365 RLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNE 424
            +++ P +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+  + K+ I +MTSN+ S+ 
Sbjct: 661 AVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRHADFKNTIIIMTSNVGSHL 720

Query: 425 IAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRI 484
           I ++  +  +EG  FS+R    ++ +                V  +L++   R EFL RI
Sbjct: 721 IQKNFEEAGREG--FSERVAEKTRQE----------------VMSLLRQTI-RPEFLNRI 761

Query: 485 NEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARS 543
           ++I+ F P +++E+  +V  +    A + L K  + I + D  V+ I   G+D  +GAR 
Sbjct: 762 DDIIMFKPLTRNEIKEIVKLQFGLVATQ-LKKQGVEINMSDDAVKYIAEAGFDPLFGARP 820

Query: 544 IKHEVERQVVSQLA 557
           IK  ++R V++ L+
Sbjct: 821 IKRAMQRWVLNDLS 834


>gi|343506630|ref|ZP_08744105.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
           700023]
 gi|342802147|gb|EGU37589.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
           700023]
          Length = 857

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 122/324 (37%), Positives = 193/324 (59%), Gaps = 29/324 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +EQ L  R++GQ+ A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEQVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLATFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  I      
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQ----- 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F+                T+      H V  ++ +HF R EFL R++E V F 
Sbjct: 727 -----ENFN----------------TLDYQGIKHEVMEVVNKHF-RPEFLNRVDESVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +  + ++   +L   AK+  ++     V +  ++ I   G+D  YGAR +K  +++ 
Sbjct: 765 PLGQEHIKSIAAIQLLRLAKRMEERGYHMEVSEKALDLIAQVGFDPVYGARPLKRAIQQS 824

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYV 575
           V + LA A     I     V+L V
Sbjct: 825 VENPLAKAILSGRIVPDKTVKLLV 848


>gi|83815749|ref|YP_446924.1| ATP-dependent chaperone protein ClpB [Salinibacter ruber DSM 13855]
 gi|294508863|ref|YP_003572922.1| Chaperone clpB [Salinibacter ruber M8]
 gi|83757143|gb|ABC45256.1| ATP-dependent chaperone protein ClpB [Salinibacter ruber DSM 13855]
 gi|294345192|emb|CBH25970.1| Chaperone clpB [Salinibacter ruber M8]
          Length = 896

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 200/323 (61%), Gaps = 22/323 (6%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E  +   +E+ L +R+VGQ+ AI ++S A++R   G  + D P+  F+FLG++G+GKT
Sbjct: 556 ESERAKLLRMEEELSERVVGQDEAIEVVSNAVRRGRTGMQEGDQPIGSFIFLGTTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D ++A +R+DMSEYQE+H  ++LIGA PGY+G+++GGQLT+ +++ P 
Sbjct: 616 ELAKTLATFLF-DDEDAMVRIDMSEYQERHTASRLIGAAPGYVGYEEGGQLTEAVRRKPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP++  VLLQ+ D+GRLTD +G+T++  + I +MTSN+ S+ I++    
Sbjct: 675 SVVLLDEIEKAHPEIFNVLLQVLDDGRLTDNQGRTVDFTNTIIIMTSNMGSDVISER--- 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         + + +G  L     +  ++ V++ +L+R   + EFL RI++IV F 
Sbjct: 732 --------------MDEVEGGYLSEREHQELEEEVLK-MLRRQV-KPEFLNRIDDIVMFR 775

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             S+  +  +V  +     + A   H++++    D +  LAD GYD  +GAR +K  ++R
Sbjct: 776 SLSREHIREIVEIQFGRVQQIADKNHDLSLELSDDAKDWLADRGYDPAFGARPLKRVMKR 835

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
            V + L+ A     I  G  VR+
Sbjct: 836 HVSNGLSQALLDGTIADGDHVRI 858


>gi|409123522|ref|ZP_11222917.1| chaperone ClpB [Gillisia sp. CBA3202]
          Length = 868

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/307 (40%), Positives = 186/307 (60%), Gaps = 26/307 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQE AI  +S A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QSEREKLLKLEDELHKRVVGQEEAIQAVSDAVRRSRAGLQDQKKPIGTFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDEAAMTRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S+ I Q   +
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGSS-IIQEKFE 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             K                    D+  +       V  +LK+   R EF+ RI++I+ F 
Sbjct: 729 TVK--------------------DLDTAMESAKVEVLGLLKQTV-RPEFINRIDDIILFT 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
           P +K ++  +V  +L    KK L K  I +    +  T L+  G+D  YGAR +K  ++R
Sbjct: 768 PLNKKDILKIVGLQLK-GLKKMLSKQGIVLDATNEALTFLSKQGFDPQYGARPVKRVLQR 826

Query: 551 QVVSQLA 557
           +V+++L+
Sbjct: 827 EVLNKLS 833


>gi|110005394|emb|CAK99717.1| putative atpase with chaperone activity, clp protease subunit
           protein [Spiroplasma citri]
          Length = 713

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/314 (39%), Positives = 189/314 (60%), Gaps = 34/314 (10%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           ++R  E E+ +   L + L+ R+ GQ  AI +++ AI R  +G  D + P+  FLFLG +
Sbjct: 402 VERLVETEKAKLLNLSKILRRRVRGQNEAIQVVADAIIRSRSGIKDPNKPIGSFLFLGPT 461

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTE+A+ LA+ +   +K+  +RLDMSEY EKH V+KLIGAPPGY+GH+ GGQLT+ +
Sbjct: 462 GVGKTEVARSLAYVLFNSEKQ-MVRLDMSEYMEKHSVSKLIGAPPGYVGHEQGGQLTEAV 520

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P ++VLFDE++KAHPD+L +LLQ+ ++GRLTD  GKT++ K+ I +MTSN+ S    
Sbjct: 521 RRSPYSIVLFDEIEKAHPDILNILLQILEDGRLTDSLGKTVDFKNTIIIMTSNIGS---- 576

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           ++ L    EG                             ++Q  L R F + EFL RI+ 
Sbjct: 577 EYLLNENNEGVGL--------------------------LIQKELARKF-KPEFLNRIDN 609

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIK 545
           +V F   SK  +  ++ +EL+   ++  +  NI I +   V E IL +GYD  +GAR IK
Sbjct: 610 VVTFNALSKDVIKEIIEKELSELTQRIENSKNIRISYSEKVLEKILNEGYDREFGARPIK 669

Query: 546 HEVERQVVSQLAAA 559
             +++ + S +A A
Sbjct: 670 RYIQQNLESLIAHA 683


>gi|432481938|ref|ZP_19723893.1| chaperone ClpB [Escherichia coli KTE210]
 gi|431006460|gb|ELD21466.1| chaperone ClpB [Escherichia coli KTE210]
          Length = 857

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|422780508|ref|ZP_16833293.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
 gi|323978455|gb|EGB73539.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
          Length = 857

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHITSIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 855


>gi|417744471|ref|ZP_12392995.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
 gi|420342987|ref|ZP_14844456.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
 gi|420374583|ref|ZP_14874550.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
 gi|332765573|gb|EGJ95786.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
 gi|391264802|gb|EIQ23787.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
 gi|391316101|gb|EIQ73582.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
          Length = 798

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 474 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 531

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 532 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 590

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 591 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 650

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 651 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 685

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 686 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 742

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 743 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 796


>gi|312973164|ref|ZP_07787337.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
 gi|310333106|gb|EFQ00320.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
          Length = 798

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 474 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 531

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 532 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 590

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 591 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 650

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 651 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 685

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 686 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 742

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 743 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 796


>gi|161522444|ref|YP_001585373.1| ATPase [Burkholderia multivorans ATCC 17616]
 gi|189348680|ref|YP_001941876.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
           multivorans ATCC 17616]
 gi|160345997|gb|ABX19081.1| ATPase AAA-2 domain protein [Burkholderia multivorans ATCC 17616]
 gi|189338818|dbj|BAG47886.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
           multivorans ATCC 17616]
          Length = 953

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 201/331 (60%), Gaps = 27/331 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R+VGQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVVGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAESVFGDE-QAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREELMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ +  +E +   GY   +GAR +K +V + +
Sbjct: 791 LSKENIRSIVQIQLDRVVRTAAAQDIQLVMGESLIEHLTEAGYQPEFGARELKRQVRQTI 850

Query: 553 VSQLAAAHEKSVIGKGSFVRLYVQWSKEVSE 583
            ++LA       +  G   R+ V + K+  E
Sbjct: 851 ETRLAKEILADALKSGD--RVEVDYDKDRGE 879


>gi|90425750|ref|YP_534120.1| ATPase [Rhodopseudomonas palustris BisB18]
 gi|90107764|gb|ABD89801.1| ATPase AAA-2 [Rhodopseudomonas palustris BisB18]
          Length = 879

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 186/307 (60%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E  L  R+VGQ  A++ ++ A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 554 EGEKDKLLRMEDSLGKRVVGQFEAVHAVATAVRRSRAGLQDPNRPMGSFMFLGPTGVGKT 613

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA Y+  D + A +RLDMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 614 ELTKALAEYLF-DDETAMVRLDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRRPY 672

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + VMTSNL           
Sbjct: 673 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNL----------- 721

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G EF      +++ +G + +V          V  +++ HF R EFL R++EI+ F 
Sbjct: 722 ----GSEF-----LVNQPEGEDTEVV------REPVMAMVRAHF-RPEFLNRVDEIILFH 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              KSE+  +V  +    A K L++  I +  D      LA+ G+D  YGAR +K  ++R
Sbjct: 766 RLQKSEMGRIVEIQFTRLA-KLLEERKIVLELDASARDWLAEKGWDPAYGARPLKRVIQR 824

Query: 551 QVVSQLA 557
            V   LA
Sbjct: 825 HVQDPLA 831


>gi|424662261|ref|ZP_18099298.1| chaperone ClpB [Bacteroides fragilis HMW 616]
 gi|404578050|gb|EKA82786.1| chaperone ClpB [Bacteroides fragilis HMW 616]
          Length = 862

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 117/298 (39%), Positives = 185/298 (62%), Gaps = 24/298 (8%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE+ L  R++GQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA +
Sbjct: 560 LEEELHQRVIGQDEAIAAVSDAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEF 619

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P +VVLFDE++
Sbjct: 620 LF-DDETMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIE 678

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I               
Sbjct: 679 KAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNMGSSYIQSQ------------ 726

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                + K   +N D  +    K+  V  +LK+   R EFL RI+E + FLP ++ E+  
Sbjct: 727 -----MEKLNSANKDEVVEETKKE--VMNMLKKTI-RPEFLNRIDETIMFLPLTEKEIKQ 778

Query: 501 LVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    +K L  + + + + D  ++ +   GYD  +GAR +K  ++R +++ L+
Sbjct: 779 IVQLQIK-SVQKMLAGNGVELKLTDAALDFLSQVGYDPEFGARPVKRAIQRYLLNDLS 835


>gi|392391529|ref|YP_006428132.1| ATP-dependent chaperone ClpB [Ornithobacterium rhinotracheale DSM
           15997]
 gi|390522607|gb|AFL98338.1| ATP-dependent chaperone ClpB [Ornithobacterium rhinotracheale DSM
           15997]
          Length = 863

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 193/314 (61%), Gaps = 34/314 (10%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQE AI+ +S AI+R   G +D+  P+  FLFLGS+G+GKTELAK LA Y
Sbjct: 558 LESELHRRVIGQEEAISAVSDAIRRNRAGLSDERRPIGSFLFLGSTGVGKTELAKALAEY 617

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +++  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P +VVL DE++
Sbjct: 618 LF-DDEDSMTRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRRPYSVVLLDEIE 676

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPD   +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ S+ I  +   L  + EE  
Sbjct: 677 KAHPDAFNILLQVLDDGRLTDNKGRTVNFKNTIVIMTSNIGSHIIQDNFADLENKDEE-- 734

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
                            +    K+ V   +LK+ F + EFL RI+E + F P  + E+  
Sbjct: 735 ----------------AVLSQTKEEVF-TLLKQSF-KPEFLNRIDETILFKPLKREEIKE 776

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETI--LAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  +L   +K    +    IV D   E I  L+  GYD  +GAR IK  ++++V+++L+
Sbjct: 777 IVELQLKSLSKLLAKRE---IVLDTTPEAINYLSRIGYDPQFGARPIKRAIQQEVLNKLS 833

Query: 558 A------AHEKSVI 565
                   H+ SV+
Sbjct: 834 KEILAGNVHDNSVV 847


>gi|338536048|ref|YP_004669382.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Myxococcus
           fulvus HW-1]
 gi|337262144|gb|AEI68304.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Myxococcus
           fulvus HW-1]
          Length = 884

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 200/339 (58%), Gaps = 34/339 (10%)

Query: 221 SGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINII 280
           SG  P   AED  + ++L +       + +  E E ++   LE RL +R++GQ+ AI ++
Sbjct: 534 SGETPEVRAED--VAEVLSRMT--GIPVTQMTEDERKKLLELESRLHERVIGQDEAIRVL 589

Query: 281 SAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQE 339
           S AI+R   G  D+  P+  FLFLG +G+GKTELAK LA  +  D+K A +R DMSEY E
Sbjct: 590 SQAIRRARAGLKDESRPIGSFLFLGPTGVGKTELAKTLAELLFGDEK-ALVRFDMSEYME 648

Query: 340 KHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRL 399
           KH V++L+GAPPGY+G+++GGQLT+ +++ P  V+LFDEV+KAHPDV  +LLQ+ D+GRL
Sbjct: 649 KHTVSRLVGAPPGYVGYEEGGQLTEAVRRRPYCVLLFDEVEKAHPDVFHMLLQVLDDGRL 708

Query: 400 TDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTIS 459
           TD +G  +  K+ + + TSNL S+ I +     RKE +E                     
Sbjct: 709 TDAQGTVVNFKNTVIIGTSNLGSHLIQEST--ARKEPQE--------------------- 745

Query: 460 RHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNI 519
              ++ V+  +LK HF   EFL RI+E V F P ++++L  +V   L    ++ L    I
Sbjct: 746 -RLRERVMG-VLKGHF-PPEFLNRIDETVVFEPLNRAQLRAIVDLMLE-KTRRMLHSQGI 801

Query: 520 NI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
            + V    +E ++  G+D  +GAR ++ E++R + + LA
Sbjct: 802 ALEVTPAALEALVDKGWDPTFGARPLRREIQRAIEAPLA 840


>gi|54035876|sp|Q8YM56.2|CLPB2_ANASP RecName: Full=Chaperone protein ClpB 2
          Length = 872

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/348 (35%), Positives = 205/348 (58%), Gaps = 32/348 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + +  E+E+ +   LE  L  R++GQ+ A+  ++ AI+R   G
Sbjct: 539 EADIAEIISKWT--GIPISKLVESEKEKLLHLEDELHHRVIGQDEAVTAVADAIQRSRAG 596

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P   F+FLG +G+GKTELAK LA Y+  D ++A +R+DMSEY EKH V++LIGA
Sbjct: 597 LADPNRPTASFVFLGPTGVGKTELAKALASYMF-DTEDALVRIDMSEYMEKHAVSRLIGA 655

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P AV+LFDE++KAHPDV  + LQ+ D+GR+TD +G T++ 
Sbjct: 656 PPGYVGYEEGGQLTETIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDF 715

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ I +MTSN+ S    Q+ L +  +   + +                       H V  
Sbjct: 716 KNTIIIMTSNIGS----QYILDIAGDNSRYDEMR---------------------HRVME 750

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
            ++  F R EFL RI+E++ F    K EL  +V  ++    K  LD   I++ + D+ ++
Sbjct: 751 AMRNSF-RPEFLNRIDEVIIFHSLDKKELRQIVQLQVERL-KARLDDRKISLRLSDVALD 808

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            +   GYD  +GAR +K  ++R++ +Q+A A  +     G  + + VQ
Sbjct: 809 FLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGEFNDGDTIFVDVQ 856


>gi|415811834|ref|ZP_11504147.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
 gi|417239377|ref|ZP_12036393.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
 gi|417278141|ref|ZP_12065457.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
 gi|417624590|ref|ZP_12274887.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
 gi|417673475|ref|ZP_12322927.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
 gi|417683458|ref|ZP_12332805.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
 gi|417829028|ref|ZP_12475576.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
 gi|419166727|ref|ZP_13711175.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
 gi|419216869|ref|ZP_13759866.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
 gi|419224608|ref|ZP_13767506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
 gi|419266272|ref|ZP_13808641.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
 gi|419303539|ref|ZP_13845514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
 gi|419350701|ref|ZP_13892036.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
 gi|419356154|ref|ZP_13897407.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
 gi|419361218|ref|ZP_13902434.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
 gi|419366349|ref|ZP_13907507.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
 gi|419813247|ref|ZP_14338100.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
 gi|420348871|ref|ZP_14850253.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
 gi|420361393|ref|ZP_14862332.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
 gi|420381868|ref|ZP_14881308.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
 gi|421683751|ref|ZP_16123542.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
 gi|424533509|ref|ZP_17976866.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
 gi|424540920|ref|ZP_17983849.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
 gi|425111332|ref|ZP_18513257.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
 gi|425157267|ref|ZP_18556537.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
 gi|425175429|ref|ZP_18573554.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
 gi|425200975|ref|ZP_18597189.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
 gi|425289734|ref|ZP_18680570.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
 gi|425301446|ref|ZP_18691335.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
 gi|425318562|ref|ZP_18707358.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
 gi|429015806|ref|ZP_19082708.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
 gi|429027740|ref|ZP_19093752.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
 gi|323173093|gb|EFZ58724.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
 gi|332089246|gb|EGI94353.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
 gi|332091986|gb|EGI97064.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
 gi|335574327|gb|EGM60653.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
 gi|345376356|gb|EGX08294.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
 gi|378006469|gb|EHV69452.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
 gi|378060300|gb|EHW22496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
 gi|378084050|gb|EHW45977.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
 gi|378115045|gb|EHW76594.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
 gi|378143617|gb|EHX04808.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
 gi|378199027|gb|EHX59495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
 gi|378199229|gb|EHX59695.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
 gi|378202339|gb|EHX62777.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
 gi|378211840|gb|EHX72173.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
 gi|385153935|gb|EIF15958.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
 gi|386213111|gb|EII23544.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
 gi|386239109|gb|EII76043.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
 gi|390860758|gb|EIP23050.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
 gi|390862609|gb|EIP24785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
 gi|391267912|gb|EIQ26843.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
 gi|391277116|gb|EIQ35872.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
 gi|391299375|gb|EIQ57339.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
 gi|404337631|gb|EJZ64082.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
 gi|408069291|gb|EKH03682.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
 gi|408090876|gb|EKH24129.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
 gi|408114538|gb|EKH46076.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
 gi|408212539|gb|EKI37061.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
 gi|408212633|gb|EKI37150.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
 gi|408237828|gb|EKI60673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
 gi|408550250|gb|EKK27588.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
 gi|427260741|gb|EKW26705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
 gi|427278327|gb|EKW42792.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
          Length = 798

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 474 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 531

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 532 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 590

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 591 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 650

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 651 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 685

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 686 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 742

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 743 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 796


>gi|300790955|ref|YP_003771246.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Amycolatopsis
           mediterranei U32]
 gi|299800469|gb|ADJ50844.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Amycolatopsis
           mediterranei U32]
          Length = 865

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 194/323 (60%), Gaps = 33/323 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ  A+ +++ A++R   G  D D P   FLFLG +G+GKT
Sbjct: 558 EGETGKLLRMEEELTRRVIGQAEAVQVVADAVRRARAGVADPDRPTGSFLFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A  R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 618 ELAKALAEFLFDDER-AIQRIDMSEYAEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I ++TSNL S  IA     
Sbjct: 677 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILILTSNLGSQAIAD---- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                       PS+ +           R  +D V++ +++R F + EFL R+++IV F 
Sbjct: 733 ------------PSLDE-----------RQRRDAVLE-VVQRQF-KPEFLNRLDDIVVFH 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
                +L ++V  ++   AK+ L +  +N+ V D   E +  +G+D  YGAR ++  V+ 
Sbjct: 768 SLGTEQLTSIVDIQIARLAKR-LAQRRLNLDVTDSAREWLALNGFDPIYGARPLRRLVQS 826

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
            +  +LA       I  G  VR+
Sbjct: 827 AIGDKLAKELLSGEIRDGDTVRV 849


>gi|384154497|ref|YP_005537313.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Amycolatopsis
           mediterranei S699]
 gi|399542833|ref|YP_006555495.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Amycolatopsis
           mediterranei S699]
 gi|340532651|gb|AEK47856.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Amycolatopsis
           mediterranei S699]
 gi|398323603|gb|AFO82550.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Amycolatopsis
           mediterranei S699]
          Length = 865

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 194/323 (60%), Gaps = 33/323 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ  A+ +++ A++R   G  D D P   FLFLG +G+GKT
Sbjct: 558 EGETGKLLRMEEELTRRVIGQAEAVQVVADAVRRARAGVADPDRPTGSFLFLGPTGVGKT 617

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A  R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 618 ELAKALAEFLFDDER-AIQRIDMSEYAEKHSVARLVGAPPGYVGYDQGGQLTEAVRRRPY 676

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ I ++TSNL S  IA     
Sbjct: 677 SVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILILTSNLGSQAIAD---- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                       PS+ +           R  +D V++ +++R F + EFL R+++IV F 
Sbjct: 733 ------------PSLDE-----------RQRRDAVLE-VVQRQF-KPEFLNRLDDIVVFH 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
                +L ++V  ++   AK+ L +  +N+ V D   E +  +G+D  YGAR ++  V+ 
Sbjct: 768 SLGTEQLTSIVDIQIARLAKR-LAQRRLNLDVTDSAREWLALNGFDPIYGARPLRRLVQS 826

Query: 551 QVVSQLAAAHEKSVIGKGSFVRL 573
            +  +LA       I  G  VR+
Sbjct: 827 AIGDKLAKELLSGEIRDGDTVRV 849


>gi|327399240|ref|YP_004340109.1| ATP-dependent chaperone ClpB [Hippea maritima DSM 10411]
 gi|327181869|gb|AEA34050.1| ATP-dependent chaperone ClpB [Hippea maritima DSM 10411]
          Length = 868

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 201/324 (62%), Gaps = 33/324 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   +E +LK+R+VGQ+ A+  +S AI R   G +D + P+  F+FLG +G+GKT
Sbjct: 556 ESEKEKLLKMEDKLKERVVGQDHAVKAVSEAILRSRAGLSDKNRPIASFIFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL+K LA Y+  D++ A IR+DMSEY EK  V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 616 ELSKALAKYLFDDER-AIIRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG T++ ++ + +MTSN+           
Sbjct: 675 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGVTVDFRNTVIIMTSNI----------- 723

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHV--VQPILKRHFRRDEFLGRINEIVY 489
               G E+  R      ++G  L+      F+  V  V   LKR F+  EFL R++EI+ 
Sbjct: 724 ----GSEYLTRIKGEPGTEGYKLE------FEKAVAEVNAELKRRFK-PEFLNRVDEIIV 772

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEV 548
           F P  ++E+  +V R L    ++ L ++   + V D  VE I  +G+D  YGAR ++  +
Sbjct: 773 FNPLGRNEIKQIV-RLLLKKTQQKLQENGYELEVSDRLVERIADEGFDPVYGARPLRRYI 831

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVR 572
           + ++ + LA A     I +G FV+
Sbjct: 832 QNRLENALAKA-----ILEGKFVK 850


>gi|434404939|ref|YP_007147824.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
 gi|428259194|gb|AFZ25144.1| ATP-dependent chaperone ClpB [Cylindrospermum stagnale PCC 7417]
          Length = 895

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/349 (35%), Positives = 203/349 (58%), Gaps = 34/349 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + +  E+E+ +   LE  L  R+VGQ  A+  ++ AI+R   G
Sbjct: 562 EADIAEIISKWT--GIPISKLVESEKEKLLHLEDELHRRVVGQAEAVTAVADAIQRSRAG 619

Query: 291 WTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  F+FLG +G+GKTELAK LA Y+  D +E+ +R+DMSEY EKH V++LIGA
Sbjct: 620 LADPNRPIASFVFLGPTGVGKTELAKALAAYMF-DTEESLVRIDMSEYMEKHTVSRLIGA 678

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQLT+ +++ P AV+LFDE++KAHPDV  + LQ+ D+GR+TD +G T++ 
Sbjct: 679 PPGYVGYEEGGQLTEAIRRRPYAVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDF 738

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ I +MTSN+ S  I                            LD+       D + + 
Sbjct: 739 KNCIIIMTSNIGSQYI----------------------------LDIAGDDSRYDEMHRR 770

Query: 470 ILK--RHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV 527
           +++  R+  R EFL RI+EI+ F    KSEL  +V  ++    ++  D+     + D  +
Sbjct: 771 VMEAMRNSFRPEFLNRIDEIIIFHSLQKSELRRIVLLQVERLRQRLSDRKMSLRLSDAAL 830

Query: 528 ETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + +   GYD  +GAR +K  ++R++ +Q+A A  +     G  + + VQ
Sbjct: 831 DFLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGEFNDGDTIFVDVQ 879


>gi|427414117|ref|ZP_18904307.1| hypothetical protein HMPREF9282_01714 [Veillonella ratti
           ACS-216-V-Col6b]
 gi|425714493|gb|EKU77496.1| hypothetical protein HMPREF9282_01714 [Veillonella ratti
           ACS-216-V-Col6b]
          Length = 816

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/301 (41%), Positives = 184/301 (61%), Gaps = 12/301 (3%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   LE  L +R+VGQ+ A+  +S A++R   G  D   P+  FLFLG +G+GKT
Sbjct: 495 EEESERLLRLEDELHERVVGQDEAVVAVSKAVRRARAGLKDPKRPIGSFLFLGPTGVGKT 554

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA  +  D+  A IRLDMSEY EKH V++L+GAPPGY+G+D+GGQLT  +++ P 
Sbjct: 555 ELARALAANLFGDEN-AMIRLDMSEYMEKHTVSRLVGAPPGYVGYDEGGQLTDAVRRKPY 613

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDEV+KAHPD   +LLQ+ D+GRLTD +G+T++ ++ + +MTSNL SN + + +  
Sbjct: 614 SVILFDEVEKAHPDFFNILLQVLDDGRLTDNQGRTVDFRNTVIIMTSNLGSNFLKEDSAA 673

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +   G   +K      K+  SN      ++  D V     KRHF R EFL RI+E+V F 
Sbjct: 674 M---GFLAAKSKDDAKKNAESNF-AEAKKNTLDAV-----KRHF-RPEFLNRIDEMVVFH 723

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  +L  +V   L    K+  ++     V    +E ++ +G D  YGAR +K  ++R 
Sbjct: 724 PLTGEDLGKIVNILLKDVTKRLAERDLALEVSPEALEVLVKEGSDFAYGARPLKRAIQRL 783

Query: 552 V 552
           V
Sbjct: 784 V 784


>gi|425278990|ref|ZP_18670226.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
 gi|408200376|gb|EKI25558.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
          Length = 798

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 474 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 531

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 532 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 590

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 591 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 650

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 651 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 685

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 686 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 742

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 743 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 796


>gi|374372910|ref|ZP_09630571.1| ATP-dependent chaperone ClpB [Niabella soli DSM 19437]
 gi|373234986|gb|EHP54778.1| ATP-dependent chaperone ClpB [Niabella soli DSM 19437]
          Length = 867

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 125/309 (40%), Positives = 192/309 (62%), Gaps = 28/309 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E  +   LE+ L  R+VGQE AI  ++ AI+R   G +D   P+  F+FLG++G+GKT
Sbjct: 551 ESEREKLLHLEEHLHQRVVGQEEAITAVADAIRRSRAGLSDPRKPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +    R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDESMMTRIDMSEYQEKHTVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KA+PDV  VLLQ+ D+GRLTD KG+ +  K+ I +MTSN+ S+ I Q+A +
Sbjct: 670 SVVLLDEIEKANPDVWNVLLQVLDDGRLTDNKGRVVNFKNTIIIMTSNIGSH-IIQNAFE 728

Query: 432 --LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
               K  EE +++      S                     L R   R EFL R++EI+ 
Sbjct: 729 NVTEKNVEEATEKAKVEVMS---------------------LLRETIRPEFLNRVDEIIM 767

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEV 548
           F P  K  +  +V  +L+   KK + ++ I + + D  +E ++  GYD  +GAR +K  +
Sbjct: 768 FHPLLKKNIKEIVKIQLD-GLKKLVAENGIQLEFSDYALEYLVDQGYDPQFGARPLKRLI 826

Query: 549 ERQVVSQLA 557
           ++++V+QL+
Sbjct: 827 QKEIVNQLS 835


>gi|257454777|ref|ZP_05620028.1| ATP-dependent chaperone protein ClpB [Enhydrobacter aerosaccus
           SK60]
 gi|257447710|gb|EEV22702.1| ATP-dependent chaperone protein ClpB [Enhydrobacter aerosaccus
           SK60]
          Length = 865

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 115/307 (37%), Positives = 194/307 (63%), Gaps = 32/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   +E++L +R+VGQ+ A+  ++ A++R   G +D + P   FLFLG +G+GKT
Sbjct: 557 QGEREKMLHMEEKLHERVVGQDEAVQAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKT 616

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D + A IR+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 617 ELTKALASFLF-DDENAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRRPY 675

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAHPDV  +LLQ+ D+GRLTD +G+ ++ K+ + +MTSNL S++I + A  
Sbjct: 676 SVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMA-- 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G+ + +   ++  S        +++HF              R EF+ RI+EIV F 
Sbjct: 734 ----GDSYEEIKAAVMNS--------VNQHF--------------RPEFVNRIDEIVVFH 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVER 550
           P  + ++  +   +L+   +K L + ++NIV  D  +  ++A GYD  YGAR +K  +++
Sbjct: 768 PLGQEQMAGIADIQLSRL-RKRLQERDMNIVLSDEAMSQLVAVGYDPVYGARPLKRAIQQ 826

Query: 551 QVVSQLA 557
           ++ + L+
Sbjct: 827 EIENPLS 833


>gi|415799266|ref|ZP_11498764.1| chaperone protein clpB domain protein, partial [Escherichia coli
           E128010]
 gi|323161335|gb|EFZ47243.1| chaperone protein clpB domain protein [Escherichia coli E128010]
          Length = 353

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 29  DAEIAEVLARWTG--IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 86

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 87  LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 145

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 146 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 205

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 206 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 240

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 241 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 297

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 298 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 351


>gi|426404948|ref|YP_007023919.1| ABC transporter ATPase [Bdellovibrio bacteriovorus str. Tiberius]
 gi|425861616|gb|AFY02652.1| ABC transporter ATPase [Bdellovibrio bacteriovorus str. Tiberius]
          Length = 862

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 189/307 (61%), Gaps = 33/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E ++   +E  LK R+VGQ+ A+ I++ AI+R     +D + P+  F+FLG +G+GKT
Sbjct: 562 ESESQKLLHMEDALKHRVVGQDHALTIVADAIRRARAEISDPNRPIGTFMFLGPTGVGKT 621

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E  K LA ++  D ++A +R+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 622 ETVKALAEFLF-DDEQAVVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTESVRRRPY 680

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ K+ + +MTSN+ S  I      
Sbjct: 681 SVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVLIMTSNVGSQSI------ 734

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                 LD  +S + K   V   L+  F R EFL RI+EIV F 
Sbjct: 735 ----------------------LDPGMSENQKREAVNEALRERF-RPEFLNRIDEIVMFK 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
              +S++  +V  +L+  A++ L    I I ++ +    LA  GYD  YGAR +K  ++ 
Sbjct: 772 SLGESQISGIVKVQLDLVAQR-LKAKKIGIDFNQEAIDFLAKKGYDPIYGARPLKRVIQS 830

Query: 551 QVVSQLA 557
           ++++ L+
Sbjct: 831 ELLNPLS 837


>gi|262199083|ref|YP_003270292.1| ATP-dependent chaperone ClpB [Haliangium ochraceum DSM 14365]
 gi|262082430|gb|ACY18399.1| ATP-dependent chaperone ClpB [Haliangium ochraceum DSM 14365]
          Length = 880

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 125/309 (40%), Positives = 196/309 (63%), Gaps = 32/309 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   +E RL+DR++GQ+ A+  +SAA++R   G  D + P+  FLFLG +G+GKT
Sbjct: 566 EGEIERLSSMEDRLRDRVIGQDPALAAVSAAVRRARAGLQDPNRPIGSFLFLGPTGVGKT 625

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D + A +R+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 626 ELARSLADFLF-DDEHAMVRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 684

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVL DEV+KAHPDV ++LLQ+ D+GRLTDG+G+T++ ++ + ++TSN+ S    QH LQ
Sbjct: 685 AVVLLDEVEKAHPDVWSILLQVLDDGRLTDGQGRTVDFRNTVLILTSNVGS----QHLLQ 740

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L                  G++    I +      V+  L + F R EFL RI+EI++F 
Sbjct: 741 L------------------GADNRTEIEQR-----VEAELAKTF-RPEFLNRIDEIIFFN 776

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P  + EL  ++  +L  +     D+  + +    + + ++A+ GYD  YGAR +K  +++
Sbjct: 777 PLERGELARIIDIQLGRFHTLLADR-GLELEVTPEAKALIAERGYDPTYGARPLKRSIQK 835

Query: 551 QVVSQLAAA 559
            ++  LA A
Sbjct: 836 NLIDPLANA 844


>gi|172065687|ref|YP_001816399.1| ATPase [Burkholderia ambifaria MC40-6]
 gi|171997929|gb|ACB68846.1| ATPase AAA-2 domain protein [Burkholderia ambifaria MC40-6]
          Length = 953

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 120/305 (39%), Positives = 192/305 (62%), Gaps = 25/305 (8%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E++L++R++GQ  A+  +S A++    G      P+  FLFLG +G+GKTE
Sbjct: 574 EERQKLLKMEEQLRERVIGQNDAVVAVSDAVRLSRAGLGQTHRPIATFLFLGPTGVGKTE 633

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ ++ IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 634 LAKALAETVFGDE-QSIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 692

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  + I + TSNL +  I  +  Q 
Sbjct: 693 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTIIIATSNLGAAIIMDNLTQ- 751

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                E +++T                +  ++ ++Q +LK HF R EFL RI+E++ F  
Sbjct: 752 ----PEAARKT---------------DKAIREQLMQ-VLKGHF-RPEFLNRIDEVIVFHA 790

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQV 552
            SK  + ++V  +L+   + A  +    ++ D  V+ +   GY   +GAR +K +V + +
Sbjct: 791 LSKENIRSIVQIQLDRVVRTAAAQDITLVMGDALVDHLTEAGYQPEFGARELKRQVRQII 850

Query: 553 VSQLA 557
            ++LA
Sbjct: 851 ETKLA 855


>gi|365873802|ref|ZP_09413335.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
 gi|363983889|gb|EHM10096.1| ATP-dependent chaperone ClpB [Thermanaerovibrio velox DSM 12556]
          Length = 873

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 192/310 (61%), Gaps = 31/310 (10%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ+ A+ ++S A+ R   G  D   P+  FLFLG +G+GKTELAK LA  +  D ++
Sbjct: 577 RVVGQDEAVRLVSEAVLRARAGIKDPRRPIGSFLFLGPTGVGKTELAKALAEALF-DSED 635

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
             +R+DMSEY EKH V++LIGAPPGY+G+++GGQLT+++++ P +V+LFDEV+KAHPDV 
Sbjct: 636 NMVRIDMSEYMEKHSVSRLIGAPPGYVGYEEGGQLTEQVRRKPYSVILFDEVEKAHPDVF 695

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
             LLQ+ D+GR+TD  GKT++ K+ + ++TSN+ S    QH  ++               
Sbjct: 696 NTLLQILDDGRVTDSHGKTVDFKNCVIILTSNVGS----QHLSRV--------------- 736

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
            + GS+ +    +   D V      R   R EF+ R++EI+ F P +K E+ T+V   ++
Sbjct: 737 -TSGSDFEEAAKKAL-DEV------RALFRPEFINRLDEIIVFKPLTKDEVRTIVSMLIS 788

Query: 508 FWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++  D+ NI++   +  ++ I  +GYD  YGAR +K  ++R + + LA A  K  + 
Sbjct: 789 KVAERLKDR-NISVEASEKAMDLIAQEGYDPIYGARPLKRAIQRMIETPLAKAILKGELK 847

Query: 567 KGSFVRLYVQ 576
           +G + R+ VQ
Sbjct: 848 EGGWTRIDVQ 857


>gi|422792066|ref|ZP_16844768.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
 gi|323971463|gb|EGB66699.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
          Length = 809

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 485 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 542

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 543 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 601

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 602 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 661

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 662 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 696

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 697 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 753

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 754 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 807


>gi|70727483|ref|YP_254399.1| endopeptidase Clp ATP-binding subunit C [Staphylococcus
           haemolyticus JCSC1435]
 gi|122063324|sp|Q4L3I4.1|CLPC_STAHJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|68448209|dbj|BAE05793.1| endopeptidas Clp ATP-binding chain C [Staphylococcus haemolyticus
           JCSC1435]
          Length = 824

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 187/312 (59%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  R   LEQ L DR++GQ  A+  IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   +++A IR+DMSE+ EKH V++L+GAPPGY+GHD+GGQLT+++
Sbjct: 548 GVGKTELARALAESMF-GEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDEGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+ ++ ++ + +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRQVDFRNTVIIMTSNVGAQELQ 666

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                    G            S+G + +       K+      LK  F R EFL R+++
Sbjct: 667 DQRFAGFGGG------------SEGHDYETIRKTMMKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIK 545
           I+ F   SK EL  +V   +N   ++ L + +INI V D   E I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLSKDELKEIVTMMVNKLTQR-LSEQDINIVVTDKAKEKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ V   L+
Sbjct: 767 RAIQKTVEDNLS 778


>gi|444376517|ref|ZP_21175759.1| ClpB protein [Enterovibrio sp. AK16]
 gi|443679337|gb|ELT85995.1| ClpB protein [Enterovibrio sp. AK16]
          Length = 857

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 122/348 (35%), Positives = 207/348 (59%), Gaps = 33/348 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L +  +    + +  E E+ +   +E  L  R++GQ  A+  ++ AI+R   G
Sbjct: 533 DAEIAEVLSR--QTGIPVAKMLEGEKEKLLQMEDELHGRVIGQSEAVTSVANAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH VA+L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKSLAEFLF-DSSDAMVRIDMSEFMEKHSVARLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNLLLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++A+ +MTSNL S+ I +H  +L   G +                           +V  
Sbjct: 710 RNAVVIMTSNLGSDRIQEHFGELDYNGIK--------------------------AMVMD 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ +HF R EF+ R++E V F P  +  + ++   +L   AK+ + + ++ +    +  T
Sbjct: 744 VVGKHF-RPEFINRVDESVVFHPLGQEHIKSIAGIQLAHLAKR-MAERDLKLEVTDEALT 801

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           ++AD G+D  YGAR +K  +++ V + LA +  +  +  G  V+L V+
Sbjct: 802 LIADAGFDPVYGARPLKRAIQQSVENPLAQSILRGEVKPGLPVKLIVE 849


>gi|358052016|ref|ZP_09146007.1| endopeptidase [Staphylococcus simiae CCM 7213]
 gi|357258496|gb|EHJ08562.1| endopeptidase [Staphylococcus simiae CCM 7213]
          Length = 816

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 125/315 (39%), Positives = 190/315 (60%), Gaps = 29/315 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLGLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    +   S+G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGA---SEGQDYETIRKTMMKE------LKNAF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDK---HNINI-VWDIDVETILADGYDVHYGAR 542
           I+ F   SK EL  +V        KK  D+    NINI V D   + I  +GYD  YGAR
Sbjct: 708 IIVFHKLSKDELKEIVT----MMVKKLTDRLSEQNINIKVTDKAKDKIAEEGYDPEYGAR 763

Query: 543 SIKHEVERQVVSQLA 557
            +   +++ +   L+
Sbjct: 764 PLIRAIQKTIEDNLS 778


>gi|332880579|ref|ZP_08448253.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|357046056|ref|ZP_09107686.1| ATP-dependent chaperone protein ClpB [Paraprevotella clara YIT
           11840]
 gi|332681567|gb|EGJ54490.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|355531062|gb|EHH00465.1| ATP-dependent chaperone protein ClpB [Paraprevotella clara YIT
           11840]
          Length = 866

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 119/291 (40%), Positives = 179/291 (61%), Gaps = 20/291 (6%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R++GQ+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA Y+  D + 
Sbjct: 567 RVIGQDEAIQAVSDAVRRSRTGLQDPKRPIGSFIFLGTTGVGKTELAKALAEYLF-DDET 625

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
              R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV 
Sbjct: 626 LMTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVF 685

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ D+GRLTD KG+ +  K+ I +MTSNL S  I             F K TP   
Sbjct: 686 NILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNLGSGYIQSQ----------FEKLTPQT- 734

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
              G+     +    K  V+  +LK+   R EFL RI+E + FLP ++ ++  +V  ++N
Sbjct: 735 ---GTQAREALIEETKKEVL-GMLKKTI-RPEFLNRIDETIMFLPLTQEQIKQVVRLQIN 789

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
               + L+ + + +         LAD GYD  +GAR +K  ++R +++ L+
Sbjct: 790 -GITQMLEGNGVTLQLTDAALDFLADAGYDPEFGARPVKRAIQRYLLNDLS 839


>gi|270264626|ref|ZP_06192891.1| hypothetical protein SOD_i00430 [Serratia odorifera 4Rx13]
 gi|270041309|gb|EFA14408.1| hypothetical protein SOD_i00430 [Serratia odorifera 4Rx13]
          Length = 924

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 125/315 (39%), Positives = 196/315 (62%), Gaps = 31/315 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER+K   +E +L++R+VGQ+ A+  +S A++    G +    P+  FLFLG +G+GKTE
Sbjct: 582 EERKKLLNMEDKLRERVVGQDDAVEAVSDAVRLSRAGLSQAHRPIATFLFLGPTGVGKTE 641

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK +A  +  D+ +A IR+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+R+++ P +
Sbjct: 642 LAKAIAETVFGDE-QAIIRIDMSEYMERHAVARLIGAPPGYVGYDEGGQLTERVRRRPYS 700

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  VLLQ+FD+GRLTDGKG+ ++  +   + TSNL S  I  +A   
Sbjct: 701 VILLDEIEKAHPDVYNVLLQVFDDGRLTDGKGRVVDFSNTTIIATSNLGSAVIMNNA--- 757

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                       S+ +++  +      +   D ++Q +LK HF R EFL RI+E++ F  
Sbjct: 758 ------------SLPEAERKS-----DKAIHDELMQ-VLKGHF-RPEFLNRIDEVIVFNS 798

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQ 551
            S+  +  +V  +L    + A    NI + + D  VE ++  GY   +GAR +K  + ++
Sbjct: 799 LSQENIRLIVNIQLEHLTRTAA-AQNITLNIADSLVEHLVDVGYQPDFGARELKRRIRQE 857

Query: 552 VVSQLAAAHEKSVIG 566
           V ++LA    K ++G
Sbjct: 858 VETRLA----KEILG 868


>gi|417708677|ref|ZP_12357705.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
 gi|420332545|ref|ZP_14834195.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
 gi|332999364|gb|EGK18949.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
 gi|391249376|gb|EIQ08611.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
          Length = 857

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/354 (35%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 591 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL +   + V+
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEINEDRIVA 855


>gi|134103621|ref|YP_001109282.1| Clp protease ATP-binding subunit [Saccharopolyspora erythraea NRRL
           2338]
 gi|291004842|ref|ZP_06562815.1| putative Clp protease ATP-binding subunit [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133916244|emb|CAM06357.1| putative Clp protease ATP-binding subunit [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 860

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/322 (38%), Positives = 189/322 (58%), Gaps = 31/322 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L  R+VGQ  A+  +S A++R   G +D D P   F+FLG +G+GKT
Sbjct: 555 EGETTKLLRMEDELSARVVGQAEAVRAVSDAVRRARAGVSDPDRPTGSFMFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D + A +R+DMSEY EKH VA+L+GAPPGY+G+D GGQLT+ +++ P 
Sbjct: 615 ELAKALAGFLFDDDR-AMVRIDMSEYSEKHSVARLVGAPPGYVGYDQGGQLTESVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAH DV  VLLQ  D+GRLTDG+G+T++ +  I V+TSNL S  IA     
Sbjct: 674 SVVLFDEVEKAHQDVFDVLLQALDDGRLTDGQGRTVDFRSTILVLTSNLGSQAIAD---- 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                       P++++ Q            +D  V+ ++ +HF + EFL R++++V F 
Sbjct: 730 ------------PNLTEQQ------------RDEAVRAVVHQHF-KPEFLNRLDDVVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
             S  EL ++V  ++   A++   +  +  V     + +  +G+D  +GAR ++  V+  
Sbjct: 765 ALSTEELTSIVDIQVERLAQRLAQRRLVLDVQPAARDWLALNGFDPVFGARPLRRLVQSA 824

Query: 552 VVSQLAAAHEKSVIGKGSFVRL 573
           +  QLA       I +G  VR+
Sbjct: 825 IGDQLAKKLLGGEIREGDKVRV 846


>gi|16125131|ref|NP_419695.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Caulobacter
           crescentus CB15]
 gi|221233859|ref|YP_002516295.1| ClpB protein [Caulobacter crescentus NA1000]
 gi|54035891|sp|Q9A9T4.1|CLPB_CAUCR RecName: Full=Chaperone protein ClpB
 gi|13422139|gb|AAK22863.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Caulobacter
           crescentus CB15]
 gi|220963031|gb|ACL94387.1| ClpB protein [Caulobacter crescentus NA1000]
          Length = 859

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 182/307 (59%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L+ R+VGQ+ A+  +S A++R   G  D   P+  FLFLG +G+GKT
Sbjct: 551 EGEREKLLKMEDELRGRVVGQDEALEAVSDAVRRARAGLQDPSKPIGSFLFLGPTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D+  A  R+DMSEY EKH V++LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 611 ELTKSLAEFLFADEA-AITRMDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAIRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL +  +A     
Sbjct: 670 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGAEYLASQ--- 726

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             ++GE+     P +          T+  HF              R EFL RI+EI+ F 
Sbjct: 727 --EDGEDVEAVRPMVMN--------TVRGHF--------------RPEFLNRIDEIILFK 762

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             S+  +  +V  +L    +K L    + +  D +    LAD GYD  YGAR +K  +++
Sbjct: 763 RLSRHNMGDIVRIQLQ-RVEKLLADRRMALALDAEALNWLADKGYDPVYGARPLKRVIQK 821

Query: 551 QVVSQLA 557
           ++V  +A
Sbjct: 822 ELVDPIA 828


>gi|271501677|ref|YP_003334703.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech586]
 gi|270345232|gb|ACZ77997.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech586]
          Length = 857

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 217/388 (55%), Gaps = 37/388 (9%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YG      ++ EL  +  A    +  + H+  +   DA I ++L ++      + 
Sbjct: 498 MSELQYG------KIPELEKQLAAATQAEGKTMHLLRNRVTDAEIAEVLARWT--GIPVS 549

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  E+E  +   +EQ L  R++GQ  A+  ++ +I+R   G +D + P+  FLFLG +G+
Sbjct: 550 RMLESEREKLLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGV 609

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++
Sbjct: 610 GKTELCKTLASFLF-DSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I   
Sbjct: 669 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI--- 725

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
                       +R   ++ +Q  ++ + +  H            HF R EF+ RI+E+V
Sbjct: 726 -----------QERFGEMNYAQMRDMVLGVVSH------------HF-RPEFINRIDEVV 761

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F P  ++ + ++   +L    K+  ++     + D  +E +   G+D  YGAR +K  +
Sbjct: 762 VFHPLGQAHITSIAQIQLQRLYKRMEERGYTVSISDAALELLGKSGFDPVYGARPLKRAI 821

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           ++ + + LA       +  G  V L V+
Sbjct: 822 QQMIENPLAQQILSGALVPGKAVTLDVE 849


>gi|332880092|ref|ZP_08447776.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332682088|gb|EGJ55001.1| ATP-dependent chaperone protein ClpB [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 861

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 186/306 (60%), Gaps = 23/306 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE  L  R+VGQE AI  +S AI+R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLKLESELHKRVVGQEEAIEAVSDAIRRSRAGLQDPRRPIGSFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQEKH V++L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQEKHAVSRLVGAPPGYVGYEEGGQLTEAVRRRPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+T + K+ I +MTSN+ S  I      
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRTADFKNTIIIMTSNMGSQLIQ----- 724

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F K      ++  ++         K+ V+Q  L +   R EFL RI++I+ F 
Sbjct: 725 -----EAFDKYANDTERAIETS---------KNEVLQ--LLKQTVRPEFLNRIDDIIMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P + + + ++V  +L+   K    +  +    D  ++ +   G+D  +GAR +K  ++++
Sbjct: 769 PLNANNIRSIVRLQLDAVIKMVAKEGILIDATDEAIDYLAQKGFDPQFGARPVKRIIQKE 828

Query: 552 VVSQLA 557
           V+++L+
Sbjct: 829 VLNRLS 834


>gi|414171579|ref|ZP_11426490.1| chaperone ClpB [Afipia broomeae ATCC 49717]
 gi|410893254|gb|EKS41044.1| chaperone ClpB [Afipia broomeae ATCC 49717]
          Length = 877

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 184/306 (60%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E +L +R++GQ  A++ +S A++R   G  D + P+  F+FLG +G+GKT
Sbjct: 555 EGEREKLLKMELQLAERVIGQAEAVSAVSTAVRRSRAGLQDPNRPIGSFMFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA Y+  D + A +R+DMSEY EKH VA+LIGAPPGY+G+D+GG LT+ +++ P 
Sbjct: 615 ELTKALAEYLF-DDETALVRMDMSEYMEKHSVARLIGAPPGYVGYDEGGALTEAVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL           
Sbjct: 674 QVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNL----------- 722

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               G EF         SQG   D +  R   D V+  +++  F R EFL RI+EI+ F 
Sbjct: 723 ----GSEF-------LVSQGEGEDTSAVR---DQVM-AVVRASF-RPEFLNRIDEIILFH 766

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              ++E+  +V  ++    K   D+     + D   + + A G+D  YGAR +K  ++R 
Sbjct: 767 RLQRTEMGRIVDIQMRRLLKLLADRKITLTLDDKARDWLAAKGWDPAYGARPLKRAIQRA 826

Query: 552 VVSQLA 557
           +   LA
Sbjct: 827 LQDPLA 832


>gi|331270141|ref|YP_004396633.1| Negative regulator of genetic competence clpC/mecB [Clostridium
           botulinum BKT015925]
 gi|329126691|gb|AEB76636.1| Negative regulator of genetic competence clpC/mecB [Clostridium
           botulinum BKT015925]
          Length = 767

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 127/328 (38%), Positives = 196/328 (59%), Gaps = 30/328 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
           +QR  E E  +   LE RL  R++GQ   +  ++ AI+R   G+T    P  F+F+G +G
Sbjct: 458 VQRITEEEGEKLINLEDRLHKRVIGQNEGVKSLAKAIRRNRLGFTKKKKPSSFIFVGPTG 517

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           +GKTEL K LA  +  ++ +A IR+DMSEY EKH V+KLIGAPPGY+GHDDGGQLT++++
Sbjct: 518 VGKTELVKALAGELFGNE-DALIRVDMSEYMEKHTVSKLIGAPPGYVGHDDGGQLTEKVR 576

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           + P +V+L DE++KAHPDV  +LLQ+ ++GRLTD +G+T+  +  + +MTSN+ +N    
Sbjct: 577 RKPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSQGRTVSFEHTVIIMTSNVGTN-FKA 635

Query: 428 HALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEI 487
            ++   +EG                  D   SR      V+  LK  F R EF+ RI+EI
Sbjct: 636 DSIGFNQEG-----------------YDAMESR------VKEALKETF-RPEFINRIDEI 671

Query: 488 VYFLPFSKSELHTLVCRELNF-WAKKALDKHNINIVWDIDVET-ILADGYDVHYGARSIK 545
           + F   +K EL+ ++  +L F   K+ +    IN+  D  V+  IL  GYD  YGAR ++
Sbjct: 672 IVFNSLNKDELYKII--DLMFEEVKEEVKVRKINLDIDDSVKDFILKVGYDEKYGARPLR 729

Query: 546 HEVERQVVSQLAAAHEKSVIGKGSFVRL 573
             ++R +  ++A A+    I +GS +++
Sbjct: 730 RAIQRHIEDEIAEAYLLKKIKEGSNIKV 757


>gi|359402916|ref|ZP_09195823.1| ATP dependent protease ClpB [Spiroplasma melliferum KC3]
 gi|438117797|ref|ZP_20871214.1| ATP-dependent Clp protease, ATPase subunit ClpB [Spiroplasma
           melliferum IPMB4A]
 gi|357968133|gb|EHJ90642.1| ATP dependent protease ClpB [Spiroplasma melliferum KC3]
 gi|434155963|gb|ELL44866.1| ATP-dependent Clp protease, ATPase subunit ClpB [Spiroplasma
           melliferum IPMB4A]
          Length = 713

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/345 (37%), Positives = 201/345 (58%), Gaps = 37/345 (10%)

Query: 218 KDNSG-HIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESA 276
           K  SG H+  +   + +I  I+ K+     D  R  E E+ +   L + L+ R+ GQ  A
Sbjct: 373 KQASGSHLLKEDVTERDIAAIVGKWTGIPVD--RLVETEKAKLLNLSKILRRRVRGQNEA 430

Query: 277 INIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMS 335
           I +++ AI R  +G  D + P+  FLFLG +G+GKTE+A+ LA+ +   +K+  +RLDMS
Sbjct: 431 IQVVADAIIRSRSGIKDPNKPIGSFLFLGPTGVGKTEVARSLAYVLFNSEKQ-MVRLDMS 489

Query: 336 EYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFD 395
           EY EKH V+KLIGAPPGY+GH+ GGQLT+ +++ P ++VLFDE++KAHPD+L +LLQ+ +
Sbjct: 490 EYMEKHSVSKLIGAPPGYVGHEQGGQLTEAVRRSPYSIVLFDEIEKAHPDILNILLQILE 549

Query: 396 EGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLD 455
           +GRLTD  GKT++ K+ I +MTSN+ S    ++ L    EG                   
Sbjct: 550 DGRLTDSLGKTVDFKNTIIIMTSNIGS----EYLLNENNEGVGL---------------- 589

Query: 456 VTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALD 515
                     ++Q  L R F + EFL RI+ +V F   SK  +  ++ +EL+   ++  +
Sbjct: 590 ----------LIQKELARKF-KPEFLNRIDNVVTFNALSKDVIKEIIEKELSELTQRIEN 638

Query: 516 KHNINIVWDIDV-ETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
             NI I +   V E IL +GYD  +GAR IK  +++ + S +A A
Sbjct: 639 SKNIRISYSEKVLEKILNEGYDREFGARPIKRYIQQNLESLIAHA 683


>gi|304384235|ref|ZP_07366646.1| chaperone protein ClpB [Prevotella marshii DSM 16973]
 gi|304334551|gb|EFM00833.1| chaperone protein ClpB [Prevotella marshii DSM 16973]
          Length = 862

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 123/293 (41%), Positives = 175/293 (59%), Gaps = 30/293 (10%)

Query: 270 IVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEA 328
           ++GQ+ AI  +S A++R   G  D   PL  F+FLG++G+GKTELAK LA Y+  D+   
Sbjct: 568 VIGQDEAIAAVSDAVRRSRAGLQDPKRPLASFIFLGTTGVGKTELAKALADYLFNDET-M 626

Query: 329 FIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLT 388
             R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV  
Sbjct: 627 MTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFN 686

Query: 389 VLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISK 448
           +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I                      K
Sbjct: 687 ILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQSQ-----------------FEK 729

Query: 449 SQGSNLDVTISRHFKDH---VVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRE 505
              SN D     H  D     V  +LK+   R EFL RI+E + FLP SKSE+  +V  +
Sbjct: 730 MNNSNRD-----HLIDETKTTVMSMLKKTI-RPEFLNRIDETIMFLPLSKSEIAEVVKLQ 783

Query: 506 LNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQVVSQLA 557
           +    KK L      + V    ++ +   G+D  +GAR +K  ++R V++ L+
Sbjct: 784 IA-AVKKMLAPQGFTLDVTPAAIDYLATVGFDPEFGARPVKRAIQRYVLNDLS 835


>gi|288928570|ref|ZP_06422417.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288331404|gb|EFC69988.1| ATP-dependent chaperone protein ClpB [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 862

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 119/290 (41%), Positives = 179/290 (61%), Gaps = 24/290 (8%)

Query: 270 IVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEA 328
           ++ Q+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA Y+  D+   
Sbjct: 568 VIAQDEAIAAVSDAVRRSRAGLQDPKRPIASFIFLGTTGVGKTELAKALAEYLFNDES-M 626

Query: 329 FIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLT 388
             R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV  
Sbjct: 627 MTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFN 686

Query: 389 VLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISK 448
           +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q    L +     + R   + +
Sbjct: 687 ILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQCANLSE-----ANRDEVLDE 741

Query: 449 SQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNF 508
           ++   +D              +LK+   R EFL RI+E + FLP +K E+  +V  ++  
Sbjct: 742 TRQKVMD--------------MLKQTI-RPEFLNRIDETIMFLPLTKQEIAEVVRLQMRS 786

Query: 509 WAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
              + L +    I    D  ++LAD GYD  +GAR +K  ++R V++ L+
Sbjct: 787 VG-RMLAEQGFKIDVSDDAISLLADLGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|388456237|ref|ZP_10138532.1| endopeptidase Clp ATP-binding subunit B [Fluoribacter dumoffii
           Tex-KL]
          Length = 858

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 194/307 (63%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E+ L +R++GQ  AI+ +S +I+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EGEKEKLLRMEEVLHNRLIGQNEAIDAVSNSIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKALASFLF-DTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAH DV  +LLQ+ D+GRLTDG+G+T++ ++ I VMTSNL SN I +   +
Sbjct: 672 SVILLDEVEKAHADVFNILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSNLIQEMGNK 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            + E                           KD V++ ++++HF R EF+ RI++ V F 
Sbjct: 732 FKYE-------------------------QIKDAVME-MVRQHF-RPEFINRIDDTVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              K ++  +   ++++  K+ L + +I++    +  T LAD G+D  YGAR +K  +++
Sbjct: 765 SLEKDQIAKIAAIQISYLQKR-LKQQDIHLEVTKEALTHLADAGFDPVYGARPLKRTIQQ 823

Query: 551 QVVSQLA 557
           QV + LA
Sbjct: 824 QVENPLA 830


>gi|383761689|ref|YP_005440671.1| chaperone ClpB [Caldilinea aerophila DSM 14535 = NBRC 104270]
 gi|381381957|dbj|BAL98773.1| chaperone ClpB [Caldilinea aerophila DSM 14535 = NBRC 104270]
          Length = 864

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 184/306 (60%), Gaps = 31/306 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E  +   +E+ L  R+VGQ+ A+  ++ AI+R   G  D + P+  F+FLG +G GKT
Sbjct: 556 ESEREKLLRMEEYLHRRVVGQDEAVRAVANAIRRSRAGLQDPNRPIGSFIFLGPTGTGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA Y+  D++ A IR+DMSEYQE+H VA+LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 616 ELARSLAEYLFDDER-ALIRIDMSEYQERHTVARLIGAPPGYIGYDEGGQLTEAVRRRPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHP+V  VLLQ+ D+GRLTD +G+T++ K+ + +MTSNL S  I      
Sbjct: 675 SVVLFDEIEKAHPEVFNVLLQVLDDGRLTDSQGRTVDFKNTVIIMTSNLGSQYI------ 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                 LDV       +  V+ +L+ HF R EFL RI+EIV F 
Sbjct: 729 ----------------------LDVAEVDEEVERRVREVLRSHF-RPEFLNRIDEIVVFH 765

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              + +L  ++  +L    K   D+     + D   E ++ +GYD  +GAR +K  ++ +
Sbjct: 766 ALKREQLKEIIDIQLERLRKLLADRRITIELTDAAKELLINEGYDPAFGARPLKRVIQHR 825

Query: 552 VVSQLA 557
           +   LA
Sbjct: 826 IADPLA 831


>gi|417866682|ref|ZP_12511722.1| hypothetical protein C22711_3610 [Escherichia coli O104:H4 str.
           C227-11]
 gi|341919971|gb|EGT69580.1| hypothetical protein C22711_3610 [Escherichia coli O104:H4 str.
           C227-11]
          Length = 334

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 10  DAEIAEVLARWTG--IPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 67

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 68  LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 126

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 127 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 186

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 187 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 221

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 222 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 278

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 279 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 332


>gi|418061731|ref|ZP_12699572.1| ATPase AAA-2 domain protein [Methylobacterium extorquens DSM 13060]
 gi|373564717|gb|EHP90805.1| ATPase AAA-2 domain protein [Methylobacterium extorquens DSM 13060]
          Length = 964

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 202/331 (61%), Gaps = 31/331 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEE+ K   LE++L +R++GQE AI  ++ A++    G  +   P   FLFLG +G+GKT
Sbjct: 604 AEEKDKLLKLEEKLHERVIGQEEAIRAVADAVRLARAGLREGSGPTATFLFLGPTGVGKT 663

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  I  D+ +A IR+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P 
Sbjct: 664 ELAKTLAEVIFGDQ-DAMIRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRRPY 722

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I ++   
Sbjct: 723 SVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRN--- 779

Query: 432 LRKEG-EEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
           L K G  EF +        Q S L               +L+ HF R EF+ RI+EI+ F
Sbjct: 780 LTKRGSREFDE------AKQKSEL-------------MEVLRGHF-RPEFINRIDEIIVF 819

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVE 549
              ++SE+  +V  +LN   + AL    + + +D+  V+   A G+   +GAR ++  + 
Sbjct: 820 HSLNQSEIRQIVELQLNRVKRTAL-GQGVELEFDVSVVDHFGAVGFRPEFGARELRRLIR 878

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
            ++ ++LA       I  G  VR  V WS++
Sbjct: 879 SELETELAREMLSGRIEDGDKVR--VAWSED 907


>gi|328953205|ref|YP_004370539.1| ATP-dependent chaperone ClpB [Desulfobacca acetoxidans DSM 11109]
 gi|328453529|gb|AEB09358.1| ATP-dependent chaperone ClpB [Desulfobacca acetoxidans DSM 11109]
          Length = 858

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 117/307 (38%), Positives = 189/307 (61%), Gaps = 34/307 (11%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E+RL +R+VGQ  A+  +S A++R  +G  D + P+  F+F+G +G+GKT
Sbjct: 556 EGEKMKLVHMEERLANRVVGQSEAVQAVSNAVRRARSGIQDPNRPMGSFIFMGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D ++A IRLDMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 616 ELARALAEFLF-DSEQAMIRLDMSEYMEKHTVSRLIGAPPGYVGYEEGGQLTEAVRRRPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHP+V   LLQ+ D+GR+TDG G+T++ K+ I +MTSN+ S  I      
Sbjct: 675 SVILFDEIEKAHPEVFDALLQILDDGRMTDGHGRTVDFKNTILIMTSNIGSQYI------ 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                 ++VT     +  V++  L+ HF + EFL R+++I+ F 
Sbjct: 729 ----------------------MEVTDEEEMRRKVMEA-LRFHF-KPEFLNRVDDIIIFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              K+ L  +V  ++    ++ L++H I +         LA+ G+D  YGAR ++  ++R
Sbjct: 765 RLDKAHLRQIVDLQVQKLVRR-LEEHGIRLELTDRARDFLAEAGFDPVYGARPLRRAIQR 823

Query: 551 QVVSQLA 557
           QV   LA
Sbjct: 824 QVQDSLA 830


>gi|443311162|ref|ZP_21040795.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
 gi|442778802|gb|ELR89062.1| ATP-dependent chaperone ClpB [Synechocystis sp. PCC 7509]
          Length = 879

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 126/332 (37%), Positives = 196/332 (59%), Gaps = 38/332 (11%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ K+      + R  E+E ++   LE  L +R++GQ  A+  +SAAI+R   G
Sbjct: 540 EADIAEIVAKWT--GIPVNRLLESERQKLLQLESHLHERVIGQTEAVEAVSAAIRRARAG 597

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D   P+  FLF+G +G+GKTELA+ LA ++  D  +A +RLDMSEY EKH V++L+GA
Sbjct: 598 MKDPGRPIGSFLFMGPTGVGKTELARALAQFLF-DADDALVRLDMSEYMEKHSVSRLVGA 656

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQL++ +++ P +VVL DEV+KAHPDV  +LLQ+ D+GR+TD +G+T++ 
Sbjct: 657 PPGYVGYEEGGQLSEAVRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDF 716

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++++ VMTSN+ S  I   A   RK             + Q   LD              
Sbjct: 717 RNSVIVMTSNIGSEHILDVAGDDRK-----------YDQMQTKVLDA------------- 752

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVC----RELNFWAKKALDKHNINIVWDI 525
            L+ HF R EFL R+++I+ F   ++SEL  +V     R +N  A + +     +   D 
Sbjct: 753 -LRSHF-RPEFLNRVDDIILFHTLNRSELRQIVAIQIKRVMNLLADQKISLELSSPALDF 810

Query: 526 DVETILADGYDVHYGARSIKHEVERQVVSQLA 557
             E     GYD  YGAR +K  +++Q+ + LA
Sbjct: 811 LAEA----GYDPVYGARPLKRAIQKQIENPLA 838


>gi|343511111|ref|ZP_08748296.1| hypothetical protein VIS19158_01764 [Vibrio scophthalmi LMG 19158]
 gi|343514770|ref|ZP_08751838.1| hypothetical protein VIBRN418_00225 [Vibrio sp. N418]
 gi|342799458|gb|EGU35024.1| hypothetical protein VIS19158_01764 [Vibrio scophthalmi LMG 19158]
 gi|342799507|gb|EGU35071.1| hypothetical protein VIBRN418_00225 [Vibrio sp. N418]
          Length = 857

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 117/308 (37%), Positives = 191/308 (62%), Gaps = 29/308 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +EQ L  R++GQ+ A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEQVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLATFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFNT 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G                          K+ V++ ++ +HF R EFL R++E V F 
Sbjct: 732 LDYQG-------------------------IKNEVME-VVNKHF-RPEFLNRVDESVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +  + ++   +L   AK+  ++     V +  ++ I   G+D  YGAR +K  +++ 
Sbjct: 765 PLGQEHIKSIAAIQLLRLAKRMEERGYHMEVSEKALDLIAQVGFDPVYGARPLKRAIQQS 824

Query: 552 VVSQLAAA 559
           V + LA A
Sbjct: 825 VENPLAKA 832


>gi|294790548|ref|ZP_06755706.1| ATP-dependent chaperone protein ClpB [Scardovia inopinata F0304]
 gi|294458445|gb|EFG26798.1| ATP-dependent chaperone protein ClpB [Scardovia inopinata F0304]
          Length = 879

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 119/309 (38%), Positives = 186/309 (60%), Gaps = 31/309 (10%)

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGI 308
           R  + E  +   +E +L  R+VGQ+ A+  +S A++R   G +D D P   FLFLG +G+
Sbjct: 566 RLMQGENEKLLTMEDQLSKRVVGQKEAVRAVSDAVRRSRAGISDPDRPTASFLFLGPTGV 625

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAK LA ++  D++ A +R+DMSEY EK  V++LIGA PGY+G+++GGQLT+ +++
Sbjct: 626 GKTELAKALADFLFDDER-AIVRIDMSEYMEKESVSRLIGAAPGYIGYEEGGQLTEAVRR 684

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +VVLFDEV+KAHP+V  VLLQ+ D+GRLTDG+G+T++ K+ I +MTSNL S  +   
Sbjct: 685 RPYSVVLFDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFKNTILIMTSNLGSQFL--- 741

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
                                    +D+ +S   +   V   +  HF + EF+ R+++++
Sbjct: 742 -------------------------VDMDLSPEQRHSAVMDAVHAHF-KPEFINRLDDLI 775

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F P ++ EL ++V  +++  A +  D+     V D   E +   GYD  YGAR ++  V
Sbjct: 776 IFNPLTRQELGSIVDIQVSRVAARLTDRRITLDVTDSAREWLADTGYDPAYGARPLRRLV 835

Query: 549 ERQVVSQLA 557
           + +V  QLA
Sbjct: 836 QSEVGDQLA 844


>gi|240142554|ref|YP_002967067.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
 gi|240012501|gb|ACS43726.1| protein disaggregation chaperone [Methylobacterium extorquens AM1]
          Length = 964

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 133/331 (40%), Positives = 202/331 (61%), Gaps = 31/331 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEE+ K   LE +L +R++GQE AI  ++ A++    G  +   P   FLFLG +G+GKT
Sbjct: 604 AEEKDKLLKLEDKLHERVIGQEEAIRAVADAVRLARAGLREGRGPTATFLFLGPTGVGKT 663

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  I  D+ +A IR+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P 
Sbjct: 664 ELAKTLAEVIFGDQ-DAIIRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRRPY 722

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I ++   
Sbjct: 723 SVVLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRN--- 779

Query: 432 LRKEG-EEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
           L+K G  EF +        Q S L               +L+ HF R EF+ RI+EI+ F
Sbjct: 780 LKKRGSSEFDE------AKQKSEL-------------MEVLRGHF-RPEFINRIDEIIVF 819

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVE 549
              ++SE+  +V  +LN   + AL    + + +D+  V+   A G+   +GAR ++  + 
Sbjct: 820 HSLNQSEIRQIVELQLNRVKRTAL-TQGVELEFDVSVVDHFGAVGFRPEFGARELRRLIR 878

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQWSKE 580
            ++ ++LA       I  G  VR  V WS++
Sbjct: 879 SELETELAREMLSGRIEDGDKVR--VAWSED 907


>gi|260912598|ref|ZP_05919127.1| chaperone ClpB [Prevotella sp. oral taxon 472 str. F0295]
 gi|429738465|ref|ZP_19272273.1| ATP-dependent chaperone protein ClpB [Prevotella saccharolytica
           F0055]
 gi|260633276|gb|EEX51437.1| chaperone ClpB [Prevotella sp. oral taxon 472 str. F0295]
 gi|429160188|gb|EKY02664.1| ATP-dependent chaperone protein ClpB [Prevotella saccharolytica
           F0055]
          Length = 862

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 121/290 (41%), Positives = 177/290 (61%), Gaps = 24/290 (8%)

Query: 270 IVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFYIHRDKKEA 328
           ++ Q+ AI  +S A++R   G  D   P+  F+FLG++G+GKTELAK LA Y+  D+   
Sbjct: 568 VIAQDEAIAAVSDAVRRSRAGLQDPKRPIASFIFLGTTGVGKTELAKALAEYLFNDES-M 626

Query: 329 FIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLT 388
             R+DMSEYQEK  V++LIGAPPGY+G+D+GGQLT+ +++ P +VVLFDE++KAHPDV  
Sbjct: 627 MTRIDMSEYQEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFN 686

Query: 389 VLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISK 448
           +LLQ+ D+GRLTD KG+T+  K+ I +MTSNL S  I Q    L                
Sbjct: 687 ILLQVLDDGRLTDNKGRTVNFKNTIIIMTSNLGSQYIQQQCANLN-------------DT 733

Query: 449 SQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNF 508
           ++   LD T  R      V  +LK+   R EFL RI+E + FLP +K ++  +V  ++  
Sbjct: 734 NRDEVLDETRQR------VMDMLKQTI-RPEFLNRIDETIMFLPLTKEQIAEVVRLQMRS 786

Query: 509 WAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
              + L +    I    D  ++LAD GYD  +GAR +K  ++R V++ L+
Sbjct: 787 VG-RMLAEQGFKIDVSDDAISLLADLGYDPEFGARPVKRAIQRYVLNDLS 835


>gi|148265968|ref|YP_001232674.1| ATPase [Geobacter uraniireducens Rf4]
 gi|146399468|gb|ABQ28101.1| ATPase AAA-2 domain protein [Geobacter uraniireducens Rf4]
          Length = 864

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 115/312 (36%), Positives = 193/312 (61%), Gaps = 32/312 (10%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  E E  +   +E+RLK R+VGQ+ A+ +++ A++R  +G +D + P+  F+FLG +
Sbjct: 553 VSRMLETESEKLVRMEERLKSRVVGQDDALTLVANAVRRARSGLSDPNRPIGSFIFLGPT 612

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTE A+ LA ++  D  ++ +R+DMSEYQEKH VA+LIGAPPGY+G+++GGQLT+ +
Sbjct: 613 GVGKTETARALAAFLF-DDDQSIVRIDMSEYQEKHTVARLIGAPPGYVGYEEGGQLTEAV 671

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P ++VLFDE++KAHP+V  VLLQ+ D+GRLTDG G+T++ ++ + +MTSNL S  I 
Sbjct: 672 RRRPYSIVLFDEIEKAHPEVFNVLLQVLDDGRLTDGHGRTVDFRNTVIIMTSNLGSQWIQ 731

Query: 427 QHALQLRKEGEEFSK-RTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRIN 485
           Q+ +       ++++ RT                      +V   LK +F + EFL R++
Sbjct: 732 QYGVS------DYARMRT----------------------MVMETLKENF-KPEFLNRLD 762

Query: 486 EIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIK 545
           EIV +      ++  +V  ++     +  ++H    + D   E +  +GYD  YGAR +K
Sbjct: 763 EIVIYHALPLDQIKHIVAIQIKALQDRLAERHLTLEITDKAREFLAHEGYDPAYGARPLK 822

Query: 546 HEVERQVVSQLA 557
             +++++   LA
Sbjct: 823 RTLQKKIQDPLA 834


>gi|157964100|ref|YP_001498924.1| chaperone ClpB [Rickettsia massiliae MTU5]
 gi|157843876|gb|ABV84377.1| ClpB [Rickettsia massiliae MTU5]
          Length = 860

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/393 (35%), Positives = 221/393 (56%), Gaps = 41/393 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YG++         ++K   +    DN G +    +E ++I  I+ +      D   
Sbjct: 502 SELKYGIIPE-------IMKKIQEAESMDNKGLLKEIVSE-SDIASIISRITGIPIDTML 553

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  R   +EQ+L++ ++GQ+ AI  +S A++R   G  D + PL  FLFLG +G+G
Sbjct: 554 SSERE--RLLVMEQKLRESVIGQDEAIKGVSDAVRRSRAGIQDINRPLGSFLFLGPTGVG 611

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL K LA ++  D + A +R+DMSEY EKH +++LIGAPPGY+G+D GG LT+ +++ 
Sbjct: 612 KTELTKALAGFLF-DDRNAILRIDMSEYMEKHAISRLIGAPPGYIGYDQGGVLTEAVRRR 670

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  V+LFDEV+KAHPD+  ++LQ+ DEGRLTD +G T++ K+ I V+TSNL +       
Sbjct: 671 PYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGA-----EI 725

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
           L  +KE E+  K                     KD V++ +  +   + EFL R++EI+ 
Sbjct: 726 LVNQKEDEDTYK--------------------VKDEVMEYV--KAVFKPEFLNRLDEIIL 763

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F   +++ +H +V  +L    +K L   NI + +D  V   LA+ GYD  +GAR +K  +
Sbjct: 764 FHRLNRNNIHDIVKIQLESL-RKILLAQNIILEFDESVLNYLAEKGYDPSFGARPLKRLI 822

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           +R++ + LA       I  G  V++  + +KE+
Sbjct: 823 QREIQNNLAKMILAGEISSGKTVKINAKDNKEL 855


>gi|398813140|ref|ZP_10571842.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
           sp. BC25]
 gi|398039301|gb|EJL32439.1| ATPase with chaperone activity, ATP-binding subunit [Brevibacillus
           sp. BC25]
          Length = 816

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/332 (37%), Positives = 198/332 (59%), Gaps = 23/332 (6%)

Query: 252 KEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGK 310
           KE E  R   +E+ L DR++GQ+ A+  IS AI+R   G  D   P+  F+FLG +G+GK
Sbjct: 497 KEEETERLLKMEEILHDRVIGQDEAVKSISRAIRRARAGLKDPKRPIGSFIFLGPTGVGK 556

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TELA+ +A  +  D+ +A IR+DMSEY EKH  A+L+GAPPGY+G D+GGQLT+++++ P
Sbjct: 557 TELARAVAETLFGDE-DAMIRVDMSEYMEKHSTARLVGAPPGYVGFDEGGQLTEKVRRKP 615

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL 430
            +V+L DE++KAHPDV  +LLQ+ D+GRLTD KG+T++ ++ + +MTSN+ +N I     
Sbjct: 616 YSVILLDEIEKAHPDVFNILLQVLDDGRLTDSKGRTVDFRNTVVIMTSNVGANMI----- 670

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                     K+  ++  +  +N      +  KD V+   LK+ F R EFL RI+E++ F
Sbjct: 671 ----------KKNTTLGFT--TNDSERKYQDMKDKVMDE-LKKSF-RPEFLNRIDEVIVF 716

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVE 549
               +  +  +V   +    +K L + +I+     + + +LA +G+D  YGAR ++  ++
Sbjct: 717 HSLEQEHIEQIVSL-MTDELRKRLKEQDIDFQLTEEAKKVLAKEGFDPAYGARPLRRAIQ 775

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           R +   L+    K  I KG  V +  +  K V
Sbjct: 776 RHIEDNLSEELLKGTISKGDTVNIEAEEGKLV 807


>gi|238760706|ref|ZP_04621827.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
 gi|238701079|gb|EEP93675.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
          Length = 857

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 212/369 (57%), Gaps = 37/369 (10%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YG      ++ EL  +  A   ++  +  +  +   +A I ++L ++      + 
Sbjct: 498 MSELQYG------KIPELEKQLAAATALEGKTMKLLRNRVTEAEIAEVLARWT--GIPVS 549

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  E+E  +   +EQ L  R++GQ+ A+  +S AI+R   G +D + P+  FLFLG +G+
Sbjct: 550 RMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGV 609

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++
Sbjct: 610 GKTELCKALATFLF-DSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I   
Sbjct: 669 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ-- 726

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
                   E F +R+ S  K                 +V  ++  HF R EF+ RI+E+V
Sbjct: 727 --------ERFGERSYSEMK----------------EMVMEVVTHHF-RPEFINRIDEVV 761

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F P  ++ L ++   +L    K+  ++     +    +E +   G+D  YGAR +K  +
Sbjct: 762 VFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETGFDPVYGARPLKRAI 821

Query: 549 ERQVVSQLA 557
           ++++ + LA
Sbjct: 822 QQEIENPLA 830


>gi|148258937|ref|YP_001243522.1| chaperone clpB [Bradyrhizobium sp. BTAi1]
 gi|146411110|gb|ABQ39616.1| Chaperone clpB [Bradyrhizobium sp. BTAi1]
          Length = 876

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 195/325 (60%), Gaps = 31/325 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E +L++R+VGQ+ AI +++ A++R   G  D   P+  FLFLG +G+GKT
Sbjct: 565 EGEREKLLHMEDKLRERVVGQDQAIVVVADAVRRARAGLQDPHRPIGSFLFLGPTGVGKT 624

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSEY EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 625 ELCKALAEFLF-DDEQAMVRIDMSEYMEKHSVARLIGAPPGYVGYEEGGSLTEAVRRRPY 683

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            V+LFDEV+KAH DV  +LLQ+ D+GRLTDG+G+T++ ++ I V+TSNL +  +A  AL 
Sbjct: 684 QVILFDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTIIVLTSNLGAEYLA--ALP 741

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             K  EE  ++                        V  +++R F R EFL R++EI+ F 
Sbjct: 742 EGKPAEEAREQ------------------------VMEVVRRSF-RPEFLNRLDEIILFN 776

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
              +SE+  +V  +L    +  L    I +  D   +T L + GYD  YGAR +K  ++R
Sbjct: 777 RLGRSEMKRIVDIQLRHL-QSLLADRKITLEVDDKAKTWLGNTGYDPVYGARPLKRVIQR 835

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYV 575
           Q+ + LA+      I  G  V++ V
Sbjct: 836 QLQNPLASMLLSGKIKDGDTVKVTV 860


>gi|441510815|ref|ZP_20992716.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
           aichiensis NBRC 108223]
 gi|441445051|dbj|GAC50677.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia
           aichiensis NBRC 108223]
          Length = 854

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/320 (38%), Positives = 191/320 (59%), Gaps = 33/320 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LE  L DR++GQ+ A+  ++ A++R   G +D + P+  FLFLG +G+GKTE
Sbjct: 512 EEREKLLGLENTLHDRVIGQDKAVTAVAEAVRRARAGLSDPNRPIGSFLFLGPTGVGKTE 571

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ +  IR DMSE+QEKH VA+L+GAPPGY+G+DD GQLT ++++ P +
Sbjct: 572 LAKALAAAVFGDE-DRMIRFDMSEFQEKHNVARLVGAPPGYVGYDDAGQLTDKVRRQPYS 630

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+LFDE++KAHPDV  VLLQL D+GR+TDG+G+T++ K+ + +MTSN+ S+      L L
Sbjct: 631 VILFDEIEKAHPDVFNVLLQLLDDGRVTDGQGRTVDFKNTLVIMTSNIGSD------LIL 684

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                +  K  P                      V  +L++ F R EFL RI+E V F  
Sbjct: 685 NAPDGDVEKVVPD---------------------VMDLLRQRF-RPEFLNRIDETVVFDR 722

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQ 551
             K++L  +V   L+   ++ L   +I + V D   + +  +GY   +GAR ++  +++Q
Sbjct: 723 LDKAQLRQIVDLTLD-GTRRMLKSQSIGLEVTDAAKDQLAEEGYQPEFGARPLRRLIQKQ 781

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           + ++L+    K  +  G  V
Sbjct: 782 LDNELSNLVLKGAVEPGDTV 801


>gi|407783886|ref|ZP_11131078.1| ATP-dependent Clp protease ATP-binding subunit [Oceanibaculum
           indicum P24]
 gi|407199417|gb|EKE69436.1| ATP-dependent Clp protease ATP-binding subunit [Oceanibaculum
           indicum P24]
          Length = 865

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/386 (36%), Positives = 214/386 (55%), Gaps = 41/386 (10%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREK 252
           L YGV+      +E  LK   D    D S H+  +      I QI+ ++     D  +  
Sbjct: 503 LMYGVIP----ELERKLKGAED----DGSHHMLKEEVTAEEIAQIVSRWTGIPVD--KMM 552

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E +L+ R++GQ+ AI  +S AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 553 EGEREKLLTMEGKLRQRVIGQDPAIIAVSNAIRRARAGLQDPNRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSEY EKH V++LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELTKALAEFLF-DDEQAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGALTEAVRRRPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            V+LFDEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S         
Sbjct: 672 QVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNLGSE-------- 723

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                         I  S  S  DV   R      V  +++  F R EFL R+++I+ F 
Sbjct: 724 --------------IMASDASGADVESMR----AAVMEVVRAAF-RPEFLNRLDDILLFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             ++  +  +V  +L     K L+  NI +      +  L D GYD  YGAR +K  ++R
Sbjct: 765 RLTRENMTGIVEVQLGRL-YKLLEDRNIALDLSDAAKAWLGDAGYDPVYGARPLKRVIQR 823

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           ++ + LA    +  I  G  V++ V+
Sbjct: 824 ELQNPLATMILEGSIHDGDRVKVDVE 849


>gi|376002531|ref|ZP_09780358.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
 gi|423067767|ref|ZP_17056557.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
 gi|375329102|emb|CCE16111.1| protein disaggregation chaperone [Arthrospira sp. PCC 8005]
 gi|406710733|gb|EKD05937.1| ATP-dependent chaperone ClpB [Arthrospira platensis C1]
          Length = 928

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 198/331 (59%), Gaps = 36/331 (10%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I  I+ K+      + R  E+E ++   LE  L  R++GQ+ A+  +SAAI+R   G
Sbjct: 575 EADIAAIVAKWT--GIPVNRLLESERQKLLQLESHLHRRVIGQQEAVEAVSAAIRRARAG 632

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D   P+  FLF+G +G+GKTELA+ LA ++  D +EA IR+DMSEY EKH V++L+GA
Sbjct: 633 MKDPGRPIGSFLFMGPTGVGKTELARALAEFLF-DSEEAMIRIDMSEYMEKHAVSRLVGA 691

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+D+GGQL++ +++ P +V+LFDEV+KAHPDV  +LLQ+ D+GR+TD +G+ ++ 
Sbjct: 692 PPGYVGYDEGGQLSEAVRRHPYSVILFDEVEKAHPDVFNILLQVLDDGRITDSQGRLVDF 751

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + VMTSN+    I   A    + GE  +                         +V  
Sbjct: 752 RNTVIVMTSNIGGEYILGVAGDDSRYGEMSA-------------------------LVMQ 786

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
            L+ HF R EFL R++EI+ F   SK+EL  +V  +++   +   D+    I  D+    
Sbjct: 787 ALRSHF-RPEFLNRVDEIILFHTLSKAELRDIVAIQMHRLQRLLADQ---KIALDLSPAA 842

Query: 530 I--LAD-GYDVHYGARSIKHEVERQVVSQLA 557
           I  +AD GYD  YGAR +K  ++R++ + +A
Sbjct: 843 IDHVADVGYDPVYGARPLKRAIQRELENPIA 873


>gi|254423501|ref|ZP_05037219.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
 gi|196190990|gb|EDX85954.1| ATPase, AAA family [Synechococcus sp. PCC 7335]
          Length = 941

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 214/368 (58%), Gaps = 38/368 (10%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I +I+ ++      + R  E+E ++   LE  L +R++GQ  A+  +SAAI+R   G
Sbjct: 549 EADIAEIVARWT--GIPVNRLLESERQKLLQLESHLHERVIGQSEAVTAVSAAIRRARAG 606

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D   P+  FLF+G +G+GKTELA+ LA ++  D +EA IRLDMSEY EK+ V++L+GA
Sbjct: 607 MKDPGRPIGSFLFMGPTGVGKTELARALASFLF-DTEEALIRLDMSEYMEKNSVSRLVGA 665

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GGQL++ +++ P +VVL DEV+KAH DV  +LLQ+ D+GR+TD +G+T++ 
Sbjct: 666 PPGYVGYEEGGQLSEAVRRHPYSVVLLDEVEKAHTDVFNILLQVLDDGRITDSQGRTVDF 725

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + VMTSN+ S    ++ L +  +  +FS+                      + +V  
Sbjct: 726 RNTVIVMTSNIGS----EYILDVSGDDAKFSE---------------------METLVMG 760

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
            L+ HF R EFL RI++ + F   SK EL ++V  +L    +   D+     + +  ++ 
Sbjct: 761 ALRSHF-RPEFLNRIDDTILFHALSKKELRSIVTIQLQRIHRLLADQKISLEMSEPAIDY 819

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGG 589
           +   GYD  YGAR +K  ++R++ + +A    ++   +GS +R        +S   A G 
Sbjct: 820 VADQGYDPTYGARPLKRAIQRELENPIATMILENTFTEGSTLR--------ISASKANGL 871

Query: 590 IIKLKVKK 597
             K+K  K
Sbjct: 872 TFKVKAAK 879


>gi|410641943|ref|ZP_11352461.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           chathamensis S18K6]
 gi|410138260|dbj|GAC10648.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           chathamensis S18K6]
          Length = 858

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/307 (38%), Positives = 189/307 (61%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E  L +R+VGQ  A+N +S AI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 555 EGEKDKLMNMESALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 615 ELCKTLANFLF-DTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA-QHAL 430
           +V+L DE++KAHPDV  +LLQ+ D+GRLTDG+G+T++ K+ + +MTSNL S+ I  QH+ 
Sbjct: 674 SVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHS- 732

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                  ++ K   S+       LDV +S HF              R EFL R++E V F
Sbjct: 733 -----ENDYEKMKQSV-------LDV-LSTHF--------------RPEFLNRVDETVVF 765

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVER 550
            P   +++ ++  ++L    ++  DK     + D  +E +   G+D  YGAR +K  ++ 
Sbjct: 766 HPLGLAQITSIASKQLQLLRRRLEDKGIGLELTDAALEKLAEAGFDPVYGARPLKRAIQM 825

Query: 551 QVVSQLA 557
           ++ + LA
Sbjct: 826 EIENPLA 832


>gi|291527301|emb|CBK92887.1| ATP-dependent chaperone ClpB [Eubacterium rectale M104/1]
          Length = 866

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 206/366 (56%), Gaps = 40/366 (10%)

Query: 191 SALHYGVVAG---NTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
           + L YGV+       E  E LLK      V++N G        D  I  I+ ++      
Sbjct: 500 AELQYGVLPNLQKELESEEALLKDRDLSLVRENVG--------DEEIALIISRWT--GIP 549

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + +  E+E  +   L++ L  R++GQ+  +  ++ AI R + G  D   P+  F+FLG +
Sbjct: 550 VAKLTESERNKTLHLDEELHKRVIGQDDGVTKVTEAIIRSKAGIKDPTKPIGSFMFLGPT 609

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA  +  D+    +RLDMSEY EK+ V++LIGAPPGY+G+D+GGQLT+ +
Sbjct: 610 GVGKTELAKALAASLFDDENN-MVRLDMSEYMEKYSVSRLIGAPPGYVGYDEGGQLTEAV 668

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVLFDEV+KAHPDV  VLLQ+ D+GR+TD +G+T++ K+ I +MTSNL S E+ 
Sbjct: 669 RRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIIIMTSNLGSQELL 728

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                                  +G   D +IS   ++ V+   LK HF R EFL R++E
Sbjct: 729 -----------------------EGIEADGSISTECENRVMDE-LKGHF-RPEFLNRLDE 763

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           I+ F P +K  +  ++   +    K+ +DK     + D   + I  +GYD  YGAR +K 
Sbjct: 764 IIMFKPLTKDNIGHIITLLMADLNKRLVDKEITVELTDTAKQFITDNGYDPVYGARPLKR 823

Query: 547 EVERQV 552
            +++ V
Sbjct: 824 YLQKHV 829


>gi|404416854|ref|ZP_10998667.1| stress response-related Clp ATPase [Staphylococcus arlettae CVD059]
 gi|403490742|gb|EJY96274.1| stress response-related Clp ATPase [Staphylococcus arlettae CVD059]
          Length = 824

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/315 (38%), Positives = 189/315 (60%), Gaps = 29/315 (9%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E +R   LE  L DR++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 489 LTKINETESQRLLNLEDTLHDRVIGQKEAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 548

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +   +++A IR+DMSE+ EKH V++L+GAPPGY+GHDDGGQLT+++
Sbjct: 549 GVGKTELARALAESMF-GEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKV 607

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+ ++ ++ + +MTSN+ + E+ 
Sbjct: 608 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRRVDFRNTVIIMTSNVGAQELQ 667

Query: 427 QH---ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGR 483
                     +EG+++     ++ K                      LK  F R EFL R
Sbjct: 668 DQKFAGFGGAEEGQDYETIRKTMLKE---------------------LKNAF-RPEFLNR 705

Query: 484 INEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGAR 542
           +++I+ F    K EL  +V   +N   ++ L + +I+I V D   E I  +GYD  YGAR
Sbjct: 706 VDDIIVFHKLDKDELKEIVTMMVNKLTER-LSEQDISISVTDTAKEKIAEEGYDPEYGAR 764

Query: 543 SIKHEVERQVVSQLA 557
            +   +++ V   L+
Sbjct: 765 PLIRAIQKTVEDNLS 779


>gi|333367821|ref|ZP_08460054.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
 gi|332978323|gb|EGK15049.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
          Length = 862

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/312 (37%), Positives = 195/312 (62%), Gaps = 32/312 (10%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  + E  +   +E+RL +R+VGQ+ A+  ++ A++R   G +D + P   FLFLG +
Sbjct: 552 VNRMLQGEREKMLAMEERLHERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSFLFLGPT 611

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL K LA ++  D ++A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +
Sbjct: 612 GVGKTELTKSLANFLF-DSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAV 670

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDEV+KAHPDV  +LLQ+ D+GRLTD +G+ ++ K+ + +MTSNL S++I 
Sbjct: 671 RRKPYSVILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQ 730

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           + A      G+++ +   ++ +S G        +HF              R EF+ RI+E
Sbjct: 731 EMA------GDDYEEIKSAVMESVG--------QHF--------------RPEFVNRIDE 762

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIK 545
           IV F P   S++  +   +LN   +  L +  ++I    D +  ++A GYD  YGAR +K
Sbjct: 763 IVVFHPLGMSQMAGIADIQLNRL-RDRLKEREMDIKLSPDAMHMLVAVGYDPVYGARPLK 821

Query: 546 HEVERQVVSQLA 557
             +++Q+ + L+
Sbjct: 822 RAIQQQIENPLS 833


>gi|423121670|ref|ZP_17109354.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
 gi|376393762|gb|EHT06417.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
          Length = 857

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 207/347 (59%), Gaps = 31/347 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E E  +   +EQ L  R++GQ  A+  +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVARMMEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKTLANFMF-DSDDAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD +   H KD ++  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYS---HMKDLIL-G 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ ++F R EF+ RI+E+V F P  +  + ++   +L    K+  ++     + D  ++ 
Sbjct: 744 VVSQNF-RPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEVHMSDEALKL 802

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + A+GYD  YGAR +K  +++Q+ + LA       +  G  V+L V+
Sbjct: 803 LSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELIPGKEVQLVVK 849


>gi|148652685|ref|YP_001279778.1| ATPase [Psychrobacter sp. PRwf-1]
 gi|148571769|gb|ABQ93828.1| ATPase AAA-2 domain protein [Psychrobacter sp. PRwf-1]
          Length = 862

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/312 (37%), Positives = 195/312 (62%), Gaps = 32/312 (10%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  + E  +   +E+RL +R+VGQ+ A+  ++ A++R   G +D + P   FLFLG +
Sbjct: 552 VNRMLQGEREKMLTMEERLHERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSFLFLGPT 611

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL K LA ++  D ++A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +
Sbjct: 612 GVGKTELTKSLANFLF-DSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAV 670

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDEV+KAHPDV  +LLQ+ D+GRLTD +G+ ++ K+ + +MTSNL S++I 
Sbjct: 671 RRKPYSVILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQ 730

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           + A      G+++ +   S+ +S G        +HF              R EF+ RI+E
Sbjct: 731 EMA------GDDYEEIKASVMESVG--------QHF--------------RPEFVNRIDE 762

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIK 545
           IV F P   S++  +   +L+   +  L +  ++I    D +  ++A GYD  YGAR +K
Sbjct: 763 IVVFHPLGMSQMAGIADIQLDRL-RSRLKEREMDIKLSADAMHMLVAVGYDPVYGARPLK 821

Query: 546 HEVERQVVSQLA 557
             +++Q+ + L+
Sbjct: 822 RAIQQQIENPLS 833


>gi|291525965|emb|CBK91552.1| ATP-dependent chaperone ClpB [Eubacterium rectale DSM 17629]
          Length = 866

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 206/366 (56%), Gaps = 40/366 (10%)

Query: 191 SALHYGVVAG---NTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
           + L YGV+       E  E LLK      V++N G        D  I  I+ ++      
Sbjct: 500 AELQYGVLPNLQKELESEEALLKDRDLSLVRENVG--------DEEIALIISRWT--GIP 549

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + +  E+E  +   L++ L  R++GQ+  +  ++ AI R + G  D   P+  F+FLG +
Sbjct: 550 VAKLTESERNKTLHLDEELHKRVIGQDDGVTKVTEAIIRSKAGIKDPTKPIGSFMFLGPT 609

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA  +  D+    +RLDMSEY EK+ V++LIGAPPGY+G+D+GGQLT+ +
Sbjct: 610 GVGKTELAKALAASLFDDENN-MVRLDMSEYMEKYSVSRLIGAPPGYVGYDEGGQLTEAV 668

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVLFDEV+KAHPDV  VLLQ+ D+GR+TD +G+T++ K+ I +MTSNL S E+ 
Sbjct: 669 RRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIIIMTSNLGSQELL 728

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                                  +G   D +IS   ++ V+   LK HF R EFL R++E
Sbjct: 729 -----------------------EGIEADGSISTECENRVMDE-LKGHF-RPEFLNRLDE 763

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           I+ F P +K  +  ++   +    K+ +DK     + D   + I  +GYD  YGAR +K 
Sbjct: 764 IIMFKPLTKDNIGHIITLLMADLNKRLVDKEITVELTDTAKQFITDNGYDPVYGARPLKR 823

Query: 547 EVERQV 552
            +++ V
Sbjct: 824 YLQKHV 829


>gi|238924911|ref|YP_002938427.1| heat shock protein ClpB-like protein [Eubacterium rectale ATCC
           33656]
 gi|238876586|gb|ACR76293.1| heat shock protein ClpB-like protein [Eubacterium rectale ATCC
           33656]
          Length = 876

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 206/366 (56%), Gaps = 40/366 (10%)

Query: 191 SALHYGVVAG---NTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYAD 247
           + L YGV+       E  E LLK      V++N G        D  I  I+ ++      
Sbjct: 510 AELQYGVLPNLQKELESEEALLKDRDLSLVRENVG--------DEEIALIISRWT--GIP 559

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + +  E+E  +   L++ L  R++GQ+  +  ++ AI R + G  D   P+  F+FLG +
Sbjct: 560 VAKLTESERNKTLHLDEELHKRVIGQDDGVTKVTEAIIRSKAGIKDPTKPIGSFMFLGPT 619

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA  +  D+    +RLDMSEY EK+ V++LIGAPPGY+G+D+GGQLT+ +
Sbjct: 620 GVGKTELAKALAASLFDDENN-MVRLDMSEYMEKYSVSRLIGAPPGYVGYDEGGQLTEAV 678

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVLFDEV+KAHPDV  VLLQ+ D+GR+TD +G+T++ K+ I +MTSNL S E+ 
Sbjct: 679 RRKPYSVVLFDEVEKAHPDVFNVLLQVLDDGRITDSQGRTVDFKNTIIIMTSNLGSQELL 738

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                                  +G   D +IS   ++ V+   LK HF R EFL R++E
Sbjct: 739 -----------------------EGIEADGSISTECENRVMDE-LKGHF-RPEFLNRLDE 773

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           I+ F P +K  +  ++   +    K+ +DK     + D   + I  +GYD  YGAR +K 
Sbjct: 774 IIMFKPLTKDNIGHIITLLMADLNKRLVDKEITVELTDTAKQFITDNGYDPVYGARPLKR 833

Query: 547 EVERQV 552
            +++ V
Sbjct: 834 YLQKHV 839


>gi|422331580|ref|ZP_16412595.1| chaperone ClpB [Escherichia coli 4_1_47FAA]
 gi|373247404|gb|EHP66847.1| chaperone ClpB [Escherichia coli 4_1_47FAA]
          Length = 415

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/356 (36%), Positives = 208/356 (58%), Gaps = 39/356 (10%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 91  DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 148

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 149 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 207

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 208 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 267

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 268 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 302

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 303 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 359

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSED 584
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL      EV+ED
Sbjct: 360 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL------EVNED 409


>gi|209524767|ref|ZP_03273314.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
 gi|209494911|gb|EDZ95219.1| ATP-dependent chaperone ClpB [Arthrospira maxima CS-328]
          Length = 928

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/331 (38%), Positives = 197/331 (59%), Gaps = 36/331 (10%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           +A+I  I+ K+      + R  E+E ++   LE  L  R++GQ+ A+  +SAAI+R   G
Sbjct: 575 EADIAAIVAKWT--GIPVNRLLESERQKLLQLESHLHRRVIGQQEAVEAVSAAIRRARAG 632

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D   P+  FLF+G +G+GKTELA+ LA ++  D +EA IR+DMSEY EKH V++L+GA
Sbjct: 633 MKDPGRPIGSFLFMGPTGVGKTELARALAEFLF-DSEEAMIRIDMSEYMEKHAVSRLVGA 691

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+D+GGQL++ +++ P +V+LFDEV+KAHPDV  +LLQ+ D+GR+TD +G+ ++ 
Sbjct: 692 PPGYVGYDEGGQLSEAVRRHPYSVILFDEVEKAHPDVFNILLQVLDDGRITDSQGRLVDF 751

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + VMTSN+    I   A    + GE  +                         +V  
Sbjct: 752 RNTVIVMTSNIGGEYILGVAGDDSRYGEMSA-------------------------LVMQ 786

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
            L+ HF R EFL R++EI+ F   SK+EL  +V  ++    +   D+    I  D+    
Sbjct: 787 ALRSHF-RPEFLNRVDEIILFHTLSKAELRDIVAIQMQRLQRLLADQ---KIALDLSPAA 842

Query: 530 I--LAD-GYDVHYGARSIKHEVERQVVSQLA 557
           I  +AD GYD  YGAR +K  ++R++ + +A
Sbjct: 843 IDHVADVGYDPVYGARPLKRAIQRELENPIA 873


>gi|347535203|ref|YP_004842628.1| ATPase with chaperone activity ATP-binding subunit [Flavobacterium
           branchiophilum FL-15]
 gi|345528361|emb|CCB68391.1| ATPase with chaperone activity ATP-binding subunit [Flavobacterium
           branchiophilum FL-15]
          Length = 867

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/309 (39%), Positives = 180/309 (58%), Gaps = 29/309 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LE  L  R+VGQE AI  +S A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLKLEDELHKRVVGQEEAIEAVSDAVRRSRAGLQDMKKPVGTFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S +I Q   +
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGS-QIIQDTFE 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             K   E +     +                    V  +LK+   R EF+ RI+EIV F 
Sbjct: 729 NLKGSVEAATEAAKVE-------------------VLGLLKQTV-RPEFINRIDEIVMFT 768

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETIL---ADGYDVHYGARSIKHEV 548
           P + + +  +V  +L    K    +    I  D   E I      GYD  +GAR +K  +
Sbjct: 769 PLTNANIAQIVGLQLKSVTKMLAQQ---GITMDATPEAIQYLSQKGYDPQFGARPVKRVI 825

Query: 549 ERQVVSQLA 557
           +R+V++QL+
Sbjct: 826 QREVLNQLS 834


>gi|296104261|ref|YP_003614407.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|392980273|ref|YP_006478861.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           dissolvens SDM]
 gi|295058720|gb|ADF63458.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|392326206|gb|AFM61159.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           dissolvens SDM]
          Length = 857

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/345 (36%), Positives = 204/345 (59%), Gaps = 33/345 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ+ A+  +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVARMMESERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMVRIDMSEFMEKHSVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD +   H KD V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYS---HMKDLVLGV 744

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I    D   
Sbjct: 745 V--SHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKR-LEERGYEIHISDDALK 801

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
           +L++ GYD  YGAR +K  +++Q+ + LA       +  G  +RL
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846


>gi|427701446|ref|YP_007044668.1| ATP-dependent chaperone ClpB [Cyanobium gracile PCC 6307]
 gi|427344614|gb|AFY27327.1| ATP-dependent chaperone ClpB [Cyanobium gracile PCC 6307]
          Length = 877

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/320 (38%), Positives = 192/320 (60%), Gaps = 30/320 (9%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQE A+  ++ AI+R   G +D + P+  FLFLG +G+GKTEL+K LA  
Sbjct: 566 LEDELHTRVIGQEQAVTAVADAIQRSRAGLSDPNRPIASFLFLGPTGVGKTELSKALASQ 625

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +EA +R+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P AV+LFDEV+
Sbjct: 626 LF-DSEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYAVILFDEVE 684

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  V+LQ+ D+GR+TDG+G+T++  + + ++TSN+ S  I   A    + G E  
Sbjct: 685 KAHPDVFNVMLQILDDGRVTDGQGRTVDFTNTVLILTSNIGSASILDLAGDPARHG-EME 743

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
           KR                        V   L+ HF R EFL R++E + F      EL  
Sbjct: 744 KR------------------------VNEALRGHF-RPEFLNRLDESIIFHSLKAEELRQ 778

Query: 501 LVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQVVSQLAAA 559
           +V  ++   A++ L++  + +  D + ++ + A GYD  YGAR +K  ++R++ + +A A
Sbjct: 779 IVELQVQRLARR-LEERKLALQVDGEALDWLAAVGYDPVYGARPLKRAIQRELETPIAKA 837

Query: 560 HEKSVIGKGSFVRLYVQWSK 579
                   GS + + V+  +
Sbjct: 838 ILAGTFPAGSTIAVDVELER 857


>gi|404405905|ref|ZP_10997489.1| ATP-dependent chaperone ClpB [Alistipes sp. JC136]
          Length = 865

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/340 (39%), Positives = 202/340 (59%), Gaps = 33/340 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           A ER K   +E  L  R++GQE AI  IS A++R   G  D   P+  F+FLG++G+GKT
Sbjct: 552 ASEREKLLHMEDELHKRVIGQEQAIAAISDAVRRSRAGLNDPRKPIGSFIFLGTTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D  +   R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 612 ELAKALAEFLFNDD-QMMTRIDMSEYQERHAVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+T++ ++ I +MTSN+ S  I ++   
Sbjct: 671 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFRNTIIIMTSNMGSQVIQENF-- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F+          G  L   +    +  V+  +LK+   + EFL RI+EIV F 
Sbjct: 729 ----AEAFN----------GKKLPGEVVEQTRLAVID-LLKQQL-KPEFLNRIDEIVMFE 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVER 550
           P +  ++  +V  +L   + K L ++ I + +     E I + GYD  YGAR +K  ++R
Sbjct: 773 PLTHKDIERIVDIQLGIVS-KMLAENGIRLEYTEKAREWIASAGYDPLYGARPVKRVIQR 831

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGI 590
            VV+ L+    K ++         V  SK +S D+ K G+
Sbjct: 832 YVVNDLS----KRILAGD------VDRSKPISIDAGKDGL 861


>gi|268610533|ref|ZP_06144260.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Ruminococcus
           flavefaciens FD-1]
          Length = 865

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/315 (40%), Positives = 187/315 (59%), Gaps = 31/315 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   LE  L  R++GQ  A+  +S AI R   G    D P+  FLFLG +G+GKT
Sbjct: 559 EGEKEKILGLEGLLHKRVIGQNEAVTKVSEAILRSRAGIQSPDRPIGSFLFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK L+  +  D++   IR+DMSEY EK  V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ELAKALSEILFDDERN-IIRIDMSEYMEKFSVSRLIGAPPGYVGYDEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV  +LLQ+ D+GR+TD +G+T++ K+ I ++TSNL S     + L+
Sbjct: 678 SVVLFDEIEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTIIILTSNLGS----PYILE 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              E  E       IS+   S +DV +   F              R EFL R++EI+YF 
Sbjct: 734 GIDENNE-------ISEEARSKVDVLLKTQF--------------RPEFLNRLDEIIYFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P SK+E+ ++V   L    K+  DKH    V D   + I+  GYD  +GAR ++    R 
Sbjct: 773 PLSKTEIMSIVDLMLKGLQKRLDDKHIKITVSDQAKQYIVDCGYDPTFGARPLR----RF 828

Query: 552 VVSQLAAAHEKSVIG 566
           + S++     K +IG
Sbjct: 829 IQSKVETIAAKRIIG 843


>gi|150025813|ref|YP_001296639.1| ATPase with chaperone activity ATP-binding subunit [Flavobacterium
           psychrophilum JIP02/86]
 gi|149772354|emb|CAL43832.1| ATPase with chaperone activity ATP-binding subunit [Flavobacterium
           psychrophilum JIP02/86]
          Length = 866

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 191/324 (58%), Gaps = 27/324 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           + E  +   LEQ L  R+VGQE AI  +S A++R   G  D   P+  FLFLG++G+GKT
Sbjct: 551 QGEREKLLHLEQELHRRVVGQEEAIEAVSDAVRRSRAGLQDLKKPVGTFLFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D + A  R+DMSEYQE+H V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 611 ELAKALAEYLF-DDENAMTRIDMSEYQERHSVSRLVGAPPGYVGYDEGGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPD   +LLQ+ DEGRLTD KG+  + K+ I +MTSN+ S  I      
Sbjct: 670 SVILLDEIEKAHPDTFNILLQVLDEGRLTDNKGRLADFKNTIIIMTSNMGSQIIQ----- 724

Query: 432 LRKEGEEFSKRTPSI-SKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                ++F     S+ + ++ + ++V             +LK+   R EF+ RI+EIV F
Sbjct: 725 -----DKFENLKGSLDAATEAAKVEVL-----------ALLKQTV-RPEFINRIDEIVMF 767

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVE 549
            P + + +  +V  +L     K L    I +    +  T L++ GYD  +GAR +K  ++
Sbjct: 768 TPLTNANIAQIVGLQLK-SVTKMLALQGITMDATPEAITYLSEKGYDPQFGARPVKRVIQ 826

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRL 573
           R V++QL+       I   S + L
Sbjct: 827 RDVLNQLSKEILAGTIATDSIILL 850


>gi|399889691|ref|ZP_10775568.1| negative regulator of genetic competence mecB/clpC [Clostridium
           arbusti SL206]
          Length = 813

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/360 (38%), Positives = 212/360 (58%), Gaps = 27/360 (7%)

Query: 218 KDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAI 277
           KD   HI S+      I  ++ K+A    +   EKE+E+  K  LE+ L  R++GQ  A+
Sbjct: 469 KDVQNHIVSE----TQIAAVVAKWANIPVEKLTEKESEKLLK--LEEILHKRVIGQNEAV 522

Query: 278 NIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSE 336
             +S A++R   G  D   P+  F+FLG +G+GKTEL+K LA  +  D+  + IR+DMSE
Sbjct: 523 KSVSRAVRRARVGLKDPKRPIGSFIFLGPTGVGKTELSKALAEAMFGDES-SIIRIDMSE 581

Query: 337 YQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDE 396
           Y EKH V++LIG+PPGY+G DDGGQLT+++++ P +VVLFDE++KAHPDV  +LLQ+ ++
Sbjct: 582 YMEKHTVSRLIGSPPGYVGFDDGGQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQILED 641

Query: 397 GRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDV 456
           GRLTDGKGKT+  ++ I ++TSN+ ++ I               KR  S+  S  ++   
Sbjct: 642 GRLTDGKGKTVNFQNTIIILTSNVGASTI---------------KRQKSLGFSVSNDETE 686

Query: 457 TISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDK 516
                 KD+++   LKR F R EFL RI++I+ F    + +L  +V   L   + + L+ 
Sbjct: 687 DEYEKMKDNIMDE-LKRSF-RPEFLNRIDDIIVFHQLLEEDLQEVVKLMLESVSSR-LND 743

Query: 517 HNINIVWDIDVETILA-DGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
            +INI +  + E +LA  G+D  YGAR ++  + + V  ++A       + KG  V + V
Sbjct: 744 QDINIKFTEEAEKLLAKKGFDPTYGARPLRRAITKIVEDKIAEEILNGSLHKGDNVSVTV 803


>gi|375011667|ref|YP_004988655.1| ATP-dependent chaperone ClpB [Owenweeksia hongkongensis DSM 17368]
 gi|359347591|gb|AEV32010.1| ATP-dependent chaperone ClpB [Owenweeksia hongkongensis DSM 17368]
          Length = 872

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/291 (41%), Positives = 177/291 (60%), Gaps = 24/291 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI  +S A++R   G  D + P+  F+F G++G+GKTE+AK LA Y+  D   
Sbjct: 568 RVVGQNEAIMAVSDAVRRSRAGLQDQNRPIGSFIFFGTTGVGKTEVAKALAEYLFNDDN- 626

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A  R+DMSEYQE+H V++LIGAPPGY+G+D+GGQLT+ +++ P +VVL DE++KAHPD  
Sbjct: 627 AITRIDMSEYQERHSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLLDEIEKAHPDTF 686

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ DEGRLTD KG+    ++ I +MTSNL S     H +Q + EG     R     
Sbjct: 687 NILLQVLDEGRLTDNKGRVANFRNTIIIMTSNLGS-----HLIQEKFEGMTDDNRH---- 737

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
                     +    +D V+Q  L R   R EFL RI+E++ F P  K ++  +V  ++N
Sbjct: 738 ---------EVYEDTRDEVIQ--LLRQTIRPEFLNRIDEMIMFQPLGKDDVKQIVKLQIN 786

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
              KK L K  I I       + LAD G+D  +GAR IK  +++++++ L+
Sbjct: 787 -GLKKLLKKQGIMIDASDSALSYLADVGFDPQFGARPIKRVIQKRILNHLS 836


>gi|449473904|ref|XP_004154017.1| PREDICTED: chaperone protein ClpB-like [Cucumis sativus]
          Length = 861

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/345 (36%), Positives = 206/345 (59%), Gaps = 33/345 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A+  +S AI+R   G
Sbjct: 537 DAEIAEVLARWT--GIPVARMMESEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 595 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMVRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD +   H KD V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYS---HMKDLVL-G 747

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ ++F R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I    D   
Sbjct: 748 VVSQNF-RPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKR-LEERGYEIHISDDALK 805

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
           +L++ GYD  YGAR +K  +++Q+ + LA       +  G  +RL
Sbjct: 806 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 850


>gi|108803150|ref|YP_643087.1| ATPase [Rubrobacter xylanophilus DSM 9941]
 gi|108764393|gb|ABG03275.1| ATPase AAA-2 [Rubrobacter xylanophilus DSM 9941]
          Length = 837

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/332 (37%), Positives = 206/332 (62%), Gaps = 32/332 (9%)

Query: 233 NIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWT 292
           +I +IL+++    A    ++EAE  R   LE  L +R++GQ+ A+  ++ AI+R   G  
Sbjct: 503 DIARILEEWTGIPATNIVQEEAE--RLLNLEAVLHERVIGQDEAVRAVAEAIRRARAGIK 560

Query: 293 DDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPP 351
           D   P+  F+FLG +G+GKTELA+ LA Y+   ++EA +R+DMSEYQEKH V++L+GAPP
Sbjct: 561 DPRRPVGSFIFLGPTGVGKTELARTLAEYLF-GEEEAMVRIDMSEYQEKHTVSRLVGAPP 619

Query: 352 GYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKD 411
           GY+G+++ GQLT+++++ P +VVLFDE++KAHPD+   LLQ+ D+GRLTD +G+T++ ++
Sbjct: 620 GYVGYEEAGQLTEQIRRRPYSVVLFDEIEKAHPDIFNTLLQILDDGRLTDAQGRTVDFRN 679

Query: 412 AIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPIL 471
           A+ +MTSN+ S    QH +  R+ G  F+ R       +G +    + R  ++ + Q   
Sbjct: 680 AVIIMTSNVGS----QHLVSERQFG--FTAR-------EGVDFR-EMERRARNALEQTF- 724

Query: 472 KRHFRRDEFLGRINEIVYFLPFSKSELHTLV---CRELNFWAKKALDKHNINIVWDIDVE 528
                R EFL R++EI+ F P SK ++  +V    R LN    K L+   I++    +  
Sbjct: 725 -----RPEFLNRVDEIIVFRPLSKEDVMQIVDIMLRRLN----KHLESQRISVEVTPEAR 775

Query: 529 TILA-DGYDVHYGARSIKHEVERQVVSQLAAA 559
             LA +GYD  +GAR +   + R + + L+++
Sbjct: 776 EFLAEEGYDPKFGARPLSRAIRRHIENPLSSS 807


>gi|428310426|ref|YP_007121403.1| ATP-dependent chaperone ClpB [Microcoleus sp. PCC 7113]
 gi|428252038|gb|AFZ17997.1| ATP-dependent chaperone ClpB [Microcoleus sp. PCC 7113]
          Length = 875

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/319 (36%), Positives = 192/319 (60%), Gaps = 33/319 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E+ +   LE  L  R+VGQ+ A+  ++ AI+R   G +D + P   F+FLG +G+GKT
Sbjct: 559 ESEKEKLLHLEDELHQRVVGQDEAVTAVADAIQRSRAGLSDPNRPTASFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D ++A +R+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKALASYLF-DTEDALVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTESIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  V+LQ+ D+GR+TD +G T++ K+ + +MTSN+ S    Q+ L 
Sbjct: 678 AVILFDEIEKAHPDVFNVMLQILDDGRVTDAQGHTVDFKNTVIIMTSNVGS----QYILD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  E  ++ +    + ++  S+                       R EFL RI+EI+ F 
Sbjct: 734 LATEDSQYDEMRSRVMEAMRSSF----------------------RPEFLNRIDEIIIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              K +L  +V  ++    ++  D+     + +  ++ +   GYD  +GAR +K  ++R+
Sbjct: 772 SLQKHQLRHIVQLQVKRLEQRLADRKMSLKLSESALDFLAEVGYDPVFGARPLKRAIQRE 831

Query: 552 VVSQLAAAHEKSVIGKGSF 570
           + +Q+A A     I +G F
Sbjct: 832 LETQIAKA-----ILRGEF 845


>gi|110597287|ref|ZP_01385575.1| AAA ATPase, central region:ATPase associated with various cellular
           activities, AAA_5 [Chlorobium ferrooxidans DSM 13031]
 gi|110341123|gb|EAT59591.1| AAA ATPase, central region:ATPase associated with various cellular
           activities, AAA_5 [Chlorobium ferrooxidans DSM 13031]
          Length = 441

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/304 (38%), Positives = 189/304 (62%), Gaps = 23/304 (7%)

Query: 256 ERRKYPL-EQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           ER+K  L EQ L  R++GQE A+  +S A+KR   G  D+  P+  F+FLG +G+GKTEL
Sbjct: 128 ERQKLLLIEQELHKRVIGQEDAVTAVSEAVKRSRAGMGDEKRPIGSFIFLGPTGVGKTEL 187

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           A+ LA Y+  D +++ IR+DMSEY E H V++L+GAPPGY+G+++GGQLT+ +++ P +V
Sbjct: 188 ARALADYLF-DDEDSMIRIDMSEYMESHTVSRLVGAPPGYVGYEEGGQLTEAVRRKPFSV 246

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           VL DE++KAHPDV  +LLQ+ D+GRLTD KG T+  K+ I +MTSN+ +  I        
Sbjct: 247 VLLDEIEKAHPDVFNILLQILDDGRLTDSKGHTVNFKNTIIIMTSNIGAQMI-------- 298

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
                       + K  G N D  +S   ++ + Q +LK+   + EFL RI+EI+ F P 
Sbjct: 299 ---------QAEMGKLDGVNRDALLS-GLQEKLFQ-LLKQQV-KPEFLNRIDEIILFTPL 346

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
           ++ EL  +V  + +   + A+ +     + D  +E +   G+D  +GAR +K  ++R++ 
Sbjct: 347 TREELKKIVIIQFDRIKETAMRQRIKLTITDGALEWVANAGFDPAFGARPLKRVMQRKIT 406

Query: 554 SQLA 557
           ++++
Sbjct: 407 NRVS 410


>gi|417729516|ref|ZP_12378211.1| chaperone protein clpB [Shigella flexneri K-671]
 gi|419192641|ref|ZP_13736093.1| chaperone protein ClpB [Escherichia coli DEC7E]
 gi|332754018|gb|EGJ84390.1| chaperone protein clpB [Shigella flexneri K-671]
 gi|378037994|gb|EHW00516.1| chaperone protein ClpB [Escherichia coli DEC7E]
          Length = 678

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 207/354 (58%), Gaps = 33/354 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A++ +S AI+R   G
Sbjct: 354 DAEIAEVLARWT--GIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAG 411

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
             D + P+  FLFLG +G+GKTEL K LA ++  D  EA +R+DMSE+ EKH V++L+GA
Sbjct: 412 LADPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDEAMVRIDMSEFMEKHSVSRLVGA 470

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 471 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 530

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD     H K+ V+  
Sbjct: 531 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYA---HMKELVLGV 565

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I + D  ++
Sbjct: 566 V--SHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKR-LEERGYEIHISDEALK 622

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
            +  +GYD  YGAR +K  +++Q+ + LA       +  G  +RL V   + V+
Sbjct: 623 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVA 676


>gi|332672025|ref|YP_004455033.1| ATP-dependent chaperone ClpB [Cellulomonas fimi ATCC 484]
 gi|332341063|gb|AEE47646.1| ATP-dependent chaperone ClpB [Cellulomonas fimi ATCC 484]
          Length = 866

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/308 (38%), Positives = 185/308 (60%), Gaps = 31/308 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E  L +R++GQ  A+  +S A++R   G +D D P   FLFLG +G+GKT
Sbjct: 562 EGETAKLLRMEDVLGERLIGQRPAVAAVSDAVRRARAGISDPDRPTGSFLFLGPTGVGKT 621

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY EKH VA+L+GAPPGY+G+++GGQLT+ +++ P 
Sbjct: 622 ELAKALADFLFDDER-AMVRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPY 680

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHP+V  VLLQ+ D+GRLTDG+G+T++ ++ I V+TSNL S  +      
Sbjct: 681 SVVLLDEVEKAHPEVFDVLLQVLDDGRLTDGQGRTVDFRNVILVLTSNLGSQFL------ 734

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                 +D  +S+  K   V   ++  F+  EFL R++++V F 
Sbjct: 735 ----------------------VDPLLSQEAKREAVMGAVRTAFK-PEFLNRLDDVVLFD 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P S  E+  +V  ++   A++  D+     V     E +  +GYD  YGAR ++  V+R+
Sbjct: 772 PLSLDEIGHIVDLQVTSLARRLADRRLTLDVTPAAREWLAIEGYDPAYGARPLRRLVQRE 831

Query: 552 VVSQLAAA 559
           +  +LA A
Sbjct: 832 IGDRLARA 839


>gi|330444639|ref|YP_004377625.1| ATP-dependent Clp protease subunit B [Chlamydophila pecorum E58]
 gi|328807749|gb|AEB41922.1| ATP-dependent Clp protease, subunit B [Chlamydophila pecorum E58]
          Length = 867

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/307 (39%), Positives = 196/307 (63%), Gaps = 27/307 (8%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+VGQ  AI+ +S +I+    G +D   PL VFLFLG +G+GKTELAK LA  +  +K+E
Sbjct: 569 RVVGQPFAISAVSDSIRAARVGLSDPQRPLGVFLFLGPTGVGKTELAKALADLLF-NKEE 627

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
           A IR DM+EY EKH V+KLIG+PPGY+G+++GG L++ L++ P +VVLFDE++KA  +V 
Sbjct: 628 AMIRFDMTEYMEKHSVSKLIGSPPGYVGYEEGGSLSEALRRRPYSVVLFDEIEKADKEVF 687

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+FDEG LTD K + + CK+A+F+MTSN+ S E+A +           +K+  ++S
Sbjct: 688 NILLQIFDEGILTDSKKRKVNCKNALFIMTSNIGSQELADYC----------AKKGSAVS 737

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
           K +  +            VV  +L+++F   EF+ RI+EI+ F+P +  ++  +V  ++ 
Sbjct: 738 KEKILS------------VVSSVLRQYF-SPEFINRIDEILPFVPLTTEDIVKIVGIQMR 784

Query: 508 FWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIG 566
             A++ L +  I++ WD  V   L++ GYD  +GAR +K  +++++V+ L+ A  K  I 
Sbjct: 785 RVAQR-LAERRISLSWDDSVVLYLSEQGYDSAFGARPLKRLIQQKIVTLLSKALLKGDIQ 843

Query: 567 KGSFVRL 573
             + + L
Sbjct: 844 PDTSIEL 850


>gi|152974698|ref|YP_001374215.1| ATPase [Bacillus cytotoxicus NVH 391-98]
 gi|152023450|gb|ABS21220.1| ATPase AAA-2 domain protein [Bacillus cytotoxicus NVH 391-98]
          Length = 866

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/306 (37%), Positives = 188/306 (61%), Gaps = 27/306 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L +R++GQE A+++++ A+ R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILSERVIGQEEAVSLVADAVLRARAGIKDPNRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAQSLF-DSEEQMIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHP+V  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S  +      
Sbjct: 678 SVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVIIMTSNIGSAYLL----- 732

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G   +  I    +D V+   L+ HF R EFL R++EI+ F 
Sbjct: 733 ------------------EGLQENGAIKEEARDLVMGE-LRGHF-RPEFLNRVDEIILFK 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  E+  +V + +     + +++H    + +   E I+  G+D  YGAR +K  V+RQ
Sbjct: 773 PLTTHEIKGIVDKIVKELQGRLVERHITVALTESAKEFIVESGFDPMYGARPLKRYVQRQ 832

Query: 552 VVSQLA 557
           + ++LA
Sbjct: 833 IETKLA 838


>gi|341583284|ref|YP_004763775.1| ClpB [Rickettsia heilongjiangensis 054]
 gi|340807510|gb|AEK74098.1| ClpB [Rickettsia heilongjiangensis 054]
          Length = 857

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/385 (35%), Positives = 215/385 (55%), Gaps = 41/385 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YG++         ++K   +    DN G +    +E +++  I+ +      D   
Sbjct: 500 SELKYGIIPE-------IMKKLQEAESMDNKGLLKEIVSE-SDVANIISRITGIPIDTML 551

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  R   +EQ+L++ ++GQ+ AI  +S A++R   G  D +HPL  FLFLG +G+G
Sbjct: 552 SSERE--RLLVMEQKLRESVIGQDEAIKGVSDAVRRSRAGIQDINHPLGSFLFLGPTGVG 609

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL K LA ++  D + A +R+DMSEY EKH +++LIGAPPGY+G+D GG LT+ +++ 
Sbjct: 610 KTELTKALASFLF-DDRNAILRIDMSEYMEKHAISRLIGAPPGYIGYDQGGVLTEAVRRR 668

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  V+LFDEV+KAHPD+  ++LQ+ DEGRLTD +G T++ K+ I V+TSNL +  +    
Sbjct: 669 PYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQ- 727

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
               KE E+  K                     KD V++ +  +   + EFL R++EI+ 
Sbjct: 728 ----KEDEDTYK--------------------VKDEVMEYV--KAVFKPEFLNRLDEIIL 761

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F   +++ +H +V  +L    KK L   NI + +D      LA+ GYD  +GAR +K  +
Sbjct: 762 FHRLNRNNIHDIVKIQLESL-KKILLAQNIILEFDESALNYLAEKGYDPSFGARPLKRLI 820

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL 573
           +R++ + LA       I  G  V++
Sbjct: 821 QREIQNNLAKMILAGEISSGKTVKI 845


>gi|336421968|ref|ZP_08602122.1| hypothetical protein HMPREF0993_01499 [Lachnospiraceae bacterium
           5_1_57FAA]
 gi|336009258|gb|EGN39252.1| hypothetical protein HMPREF0993_01499 [Lachnospiraceae bacterium
           5_1_57FAA]
          Length = 812

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 190/317 (59%), Gaps = 27/317 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           +Q+  E+E  R   LEQ L  R+VGQE A++ ++ AIKR   G  D   P+  FLFLG +
Sbjct: 489 VQKLAESESARLNKLEQTLHKRVVGQEEAVSAVAKAIKRGRVGLKDPKRPIGSFLFLGPT 548

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTEL+K LA  +  ++ +A IR+DMSEY EKH VAK+IG+PPGY+GHDDGGQL++++
Sbjct: 549 GVGKTELSKALAEALFGNE-DAMIRVDMSEYMEKHSVAKMIGSPPGYVGHDDGGQLSEQV 607

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G +TD +G+ ++ ++ + +MTSN      A
Sbjct: 608 RRHPYSVILFDEIEKAHPDVFNILLQVLDDGHITDSQGRKVDFRNTVIIMTSNAG----A 663

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
           Q  +  +K G    +      K   SN+   I   F              R EFL RI+E
Sbjct: 664 QAIIDPKKLGFNAKEDAAGDYKRMKSNVMNEIKLIF--------------RPEFLNRIDE 709

Query: 487 IVYFLPFSKSELHTLV---CRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGAR 542
           I+ F P  K ++  +V   CREL   A++  D+  I + + D     I+  G D  YGAR
Sbjct: 710 ILVFHPLDKEQMRKIVSMMCREL---ARRTKDQLGIKLDIRDSVKSHIVETGTDKKYGAR 766

Query: 543 SIKHEVERQVVSQLAAA 559
            ++  V+ Q+  +LA A
Sbjct: 767 PLRRAVQNQLEDKLAEA 783


>gi|123441247|ref|YP_001005234.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|420257395|ref|ZP_14760155.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           enterocolitica WA-314]
 gi|122088208|emb|CAL10996.1| Clp ATPase [Yersinia enterocolitica subsp. enterocolitica 8081]
 gi|404515185|gb|EKA28960.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           enterocolitica WA-314]
          Length = 857

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 212/369 (57%), Gaps = 37/369 (10%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YG      ++ EL  +  A   ++  +  +  +   +A I ++L ++      + 
Sbjct: 498 MSELQYG------KIPELEKQLAAATALEGKTMKLLRNRVTEAEIAEVLARWT--GIPVS 549

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  E+E  +   +EQ L  R++GQ+ A+  +S AI+R   G +D + P+  FLFLG +G+
Sbjct: 550 RMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGV 609

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++
Sbjct: 610 GKTELCKALATFLF-DSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I   
Sbjct: 669 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ-- 726

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
                   E F +R+ S  K                 +V  ++  HF R EF+ RI+E+V
Sbjct: 727 --------ERFGERSYSEMK----------------EMVMEVVTHHF-RPEFINRIDEVV 761

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F P  ++ L ++   +L    K+  ++     +    +E +   G+D  YGAR +K  +
Sbjct: 762 VFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETGFDPVYGARPLKRAI 821

Query: 549 ERQVVSQLA 557
           ++++ + LA
Sbjct: 822 QQEIENPLA 830


>gi|427419377|ref|ZP_18909560.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7375]
 gi|425762090|gb|EKV02943.1| ATP-dependent chaperone ClpB [Leptolyngbya sp. PCC 7375]
          Length = 868

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/298 (40%), Positives = 181/298 (60%), Gaps = 30/298 (10%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKTELAKQLAFY 320
           LE  L  R++GQE A+  ++ AI+R   G  D + P   F+FLG +G+GKTELAK LA Y
Sbjct: 568 LEDELHKRVIGQEEAVTAVADAIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALASY 627

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D +EA +R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ L++ P +V+LFDE++
Sbjct: 628 LF-DTEEAIVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEALRRRPYSVILFDEIE 686

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  ++LQ+ D+GR+TD +G+T++ K+++ +MTSN+ S  I   A    +  EE  
Sbjct: 687 KAHPDVFNIMLQILDDGRVTDSQGRTVDFKNSVIIMTSNIGSQFILDVAGDDSRY-EEMR 745

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHT 500
            R                        V  +L+  F R EFL R++E++ F    KS+L  
Sbjct: 746 TR------------------------VMDVLRSSF-RPEFLNRVDEMIIFHSLQKSQLRE 780

Query: 501 LVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVERQVVSQLA 557
           +V  ++    K+  D+  I +         LAD GYD  YGAR +K  ++R++ + +A
Sbjct: 781 IVKLQVQALEKRLADQ-KIGLSLSESALDFLADVGYDPVYGARPLKRAIQRELETAIA 837


>gi|392397079|ref|YP_006433680.1| ATP-dependent chaperone ClpB [Flexibacter litoralis DSM 6794]
 gi|390528157|gb|AFM03887.1| ATP-dependent chaperone ClpB [Flexibacter litoralis DSM 6794]
          Length = 871

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/299 (40%), Positives = 185/299 (61%), Gaps = 23/299 (7%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE  L  R+ GQ  AI  +S A++R   G  D + P+  F+FLG++G+GKTELAK LA Y
Sbjct: 561 LEAELGRRVAGQTEAIAAVSDAVRRSRAGVQDPNRPIGSFIFLGTTGVGKTELAKALAEY 620

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           +  D   A +R+DMSE+QE+H V++LIGAPPGY+G+D+GGQLT+ +++ P +V+L DE++
Sbjct: 621 LFNDDN-AMVRIDMSEFQERHSVSRLIGAPPGYVGYDEGGQLTEAVRRKPYSVILLDEIE 679

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFS 440
           KAHPDV  +LLQ+ D+GRLTD KG+    K++I +MTSN  S +I Q    L  E     
Sbjct: 680 KAHPDVFNILLQVLDDGRLTDNKGRVANFKNSIVIMTSNTGS-QIIQQNFTLANE----- 733

Query: 441 KRTPSISKSQGSNLDVTISRHFKDHVVQPI-LKRHFRRDEFLGRINEIVYFLPFSKSELH 499
                         D  + + ++D  +Q   L +   R EFL RI+EI+ F P S++E+ 
Sbjct: 734 ------------KTDEQVEQIYEDTKIQVTELLKATMRPEFLNRIDEILIFKPLSRTEIR 781

Query: 500 TLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVERQVVSQLA 557
            +V  +L    +  LD++ I +    +V + I   GYD  +GAR +K  V+R+++++L+
Sbjct: 782 QIVDLQLK-QIQNRLDENGITLEVSKEVLDYIGKIGYDPQFGARPLKRVVQREILNELS 839


>gi|296386957|ref|ZP_06876456.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa PAb1]
 gi|416874981|ref|ZP_11918474.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa 152504]
 gi|334842534|gb|EGM21140.1| putative ClpA/B protease ATP binding subunit [Pseudomonas
           aeruginosa 152504]
          Length = 932

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 194/326 (59%), Gaps = 32/326 (9%)

Query: 254 AEERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           AEER K   +E+RL  R++GQ+ AI  +S A++    G      P+  FLFLG +G+GKT
Sbjct: 577 AEEREKLLQMEERLHQRVIGQQEAITAVSDAVRLARAGLRQGSRPIATFLFLGPTGVGKT 636

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D+ +A IR+DMSEY E+H V++LIGAPPGY+G+D+GGQLT+R+++ P 
Sbjct: 637 ELAKALAEVVFGDE-DAMIRIDMSEYMERHAVSRLIGAPPGYVGYDEGGQLTERVRRRPY 695

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAH DV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S  I ++A  
Sbjct: 696 SVILLDEIEKAHADVNNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSELIMKNA-- 753

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              +  EF+     + +     L  T+  HF              R EFL R++E++ F 
Sbjct: 754 ---QAGEFALPPEKLKR----ELMTTLRGHF--------------RPEFLNRLDEVIVFE 792

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID---VETILADGYDVHYGARSIKHEV 548
             SK+++  +V  +L    + A   H  +I   ID   V  +  + Y   +GAR +K ++
Sbjct: 793 SLSKAQIEDIVRLQLERVKRAA---HAQDIYLHIDDSLVGHLAEEAYQPEFGARELKRQI 849

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLY 574
            +Q+ ++LA A  K  + +G  V  +
Sbjct: 850 RQQLETRLATAMLKGEVKEGETVTFF 875


>gi|320109104|ref|YP_004184694.1| ATP-dependent chaperone ClpB [Terriglobus saanensis SP1PR4]
 gi|319927625|gb|ADV84700.1| ATP-dependent chaperone ClpB [Terriglobus saanensis SP1PR4]
          Length = 869

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/309 (40%), Positives = 187/309 (60%), Gaps = 33/309 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E ++   +E+RL++R+VGQ+ A++ ++ AI+R   G +D   P+  F+FLG +G+GKT
Sbjct: 559 EGEVQKLVQMEERLRERVVGQDEALSAVANAIRRSRAGLSDPKRPIGSFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E A+ LA ++  D ++A +R+DMSEY EKH VA+LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ETARALAEFLF-DDEQAMVRIDMSEYMEKHAVARLIGAPPGYVGYDEGGQLTEAIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVLFDE++KAHPDV  VLLQ+ D+GRLTD KG+T++ K+ + +MTSN  ++ I   A  
Sbjct: 678 AVVLFDEIEKAHPDVFNVLLQVLDDGRLTDSKGRTVDFKNTVLIMTSNTGAS-ILSSAWA 736

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             ++G E +K                         V   L++ F R EFL R+++IV F 
Sbjct: 737 SGEDGFEEAKVR-----------------------VMDELRKQF-RPEFLNRVDDIVVFH 772

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET---ILADGYDVHYGARSIKHEV 548
           P ++S+L  ++   L        D+    I  D+       I   GYD  YGAR +K  +
Sbjct: 773 PLAESQLTHIIDLRLKDLENLLADRR---ITLDMTPAARHLIFKSGYDRAYGARPLKRAI 829

Query: 549 ERQVVSQLA 557
           +R V   LA
Sbjct: 830 QRLVQDPLA 838


>gi|153007024|ref|YP_001381349.1| ATPase [Anaeromyxobacter sp. Fw109-5]
 gi|152030597|gb|ABS28365.1| ATPase AAA-2 domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 893

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/307 (41%), Positives = 189/307 (61%), Gaps = 29/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E RL  R+VGQ+ A+  +SAA++R  +G  D   P+  F+FLG +G+GKT
Sbjct: 574 EGEVEKLLGMEDRLAQRVVGQDEAVQAVSAAVRRARSGLQDPHRPIGSFIFLGPTGVGKT 633

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E A+ LA ++  D + A +RLDMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 634 ETARALAEFLF-DDEGAMVRLDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPY 692

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAH DV  VLLQ+ D+GRLTDG+G+T++ ++A+ +MTSN+ S EI + A  
Sbjct: 693 AVILFDEIEKAHHDVFNVLLQILDDGRLTDGQGRTVDFRNAVVIMTSNIGSQEIQRLA-- 750

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
             + G + S    +I ++   NL                  R   R EFL R++EIV F 
Sbjct: 751 -GRPGADVS----AIREAALENL------------------RAEFRPEFLNRVDEIVVFR 787

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVER 550
           P S+  +  +V  +L    +K L++ +I I +     E I   GYD  YGAR +K  ++R
Sbjct: 788 PLSREHVGRIVEIQLGRL-RKLLEERHITIELSAAAREAIADAGYDPVYGARPLKRAIQR 846

Query: 551 QVVSQLA 557
            +   LA
Sbjct: 847 MIQDPLA 853


>gi|365539747|ref|ZP_09364922.1| ClpV protein [Vibrio ordalii ATCC 33509]
          Length = 858

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 188/306 (61%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   +E  L  R++GQ  A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EEEKEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S++I +    
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSQIQEKFAS 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  EG                          K  V++ I+ +HF R EFL R++E V F 
Sbjct: 732 LDYEG-------------------------IKKEVME-IVGKHF-RPEFLNRVDESVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P ++ ++ ++   +L    K+  +K     V +  +E I   G+D  YGAR +K  +++ 
Sbjct: 765 PLAQEQIKSIASIQLARLGKRMEEKGYQLEVSEKALELISQVGFDPVYGARPLKRAIQQS 824

Query: 552 VVSQLA 557
           V + LA
Sbjct: 825 VENPLA 830


>gi|419960229|ref|ZP_14476273.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae GS1]
 gi|388604901|gb|EIM34127.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae GS1]
          Length = 857

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/345 (36%), Positives = 206/345 (59%), Gaps = 33/345 (9%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L ++      + R  E+E  +   +EQ L  R++GQ  A+  +S AI+R   G
Sbjct: 533 DAEIAEVLARWT--GIPVARMMESEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMVRIDMSEFMEKHAVSRLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD +   H KD V+  
Sbjct: 710 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYS---HMKDLVL-G 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ ++F R EF+ RI+E+V F P  +  + ++   +L    K+ L++    I    D   
Sbjct: 744 VVSQNF-RPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKR-LEERGYEIHISDDALK 801

Query: 530 ILAD-GYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRL 573
           +L++ GYD  YGAR +K  +++Q+ + LA       +  G  +RL
Sbjct: 802 LLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRL 846


>gi|403715050|ref|ZP_10940859.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
 gi|403210992|dbj|GAB95542.1| chaperone ClpB [Kineosphaera limosa NBRC 100340]
          Length = 886

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/327 (37%), Positives = 188/327 (57%), Gaps = 31/327 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   +E+ L  R++GQ  A+  +S A++R   G  D D P   FLFLG +G+GKT
Sbjct: 549 EGETEKLLHMEEWLGKRLIGQTEAVRAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKT 608

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D++ A +R+DMSEY E+H VA+LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 609 ELAKSLADFLFDDER-AMVRIDMSEYSERHAVARLIGAPPGYVGYDEGGQLTEAVRRRPY 667

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHP+   +LLQ+ D+GRLTDG+G+T++ ++ I VMTSNL S  +      
Sbjct: 668 SVVLLDEVEKAHPETFDILLQVLDDGRLTDGQGRTVDFRNVILVMTSNLGSQYL------ 721

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                 +D ++S   K   V   ++  F + EFL R++E V F 
Sbjct: 722 ----------------------IDPSMSPDAKREAVMGAVRAAF-KPEFLNRLDETVIFE 758

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +  +L  +V   +   +++  D+     V +   + +   GYD  YGAR ++  V+R+
Sbjct: 759 PLTLEQLSQIVELAVAALSRRLADRRITLSVTEPARQWLARTGYDPAYGARPLRRLVQRE 818

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQWS 578
           +  +LA A     +  G  V +Y+  S
Sbjct: 819 IGDRLATALLSGQVRDGQEVTVYLAAS 845


>gi|365847002|ref|ZP_09387499.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
           43003]
 gi|364573153|gb|EHM50666.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
           43003]
          Length = 861

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/353 (35%), Positives = 205/353 (58%), Gaps = 31/353 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           D  I  +L ++      + R  E+E  +   +EQ L  R++GQ  A+  +S AI+R   G
Sbjct: 537 DVEIADVLARWT--GIPVARMMESERDKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAG 594

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GA
Sbjct: 595 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMVRIDMSEFMEKHSVSRLVGA 653

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 654 PPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 713

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +            LD +   H KD V+  
Sbjct: 714 RNTVVIMTSNLGSDLIQ----------ERFGE------------LDYS---HMKDLVLGV 748

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           +   H  R EF+ RI+E+V F P  +  + ++   +L    K+  ++     + D  ++ 
Sbjct: 749 V--SHSFRPEFINRIDEVVVFHPLGEKHIASIASIQLQRLYKRLEERGYEVHISDDALKL 806

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVS 582
           +  +GYD  YGAR +K  +++Q+ + LA       +  G  VRL V+  K V+
Sbjct: 807 LSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKTVRLEVKDDKIVA 859


>gi|349701514|ref|ZP_08903143.1| Clp protease ATP-binding subunit [Gluconacetobacter europaeus LMG
           18494]
          Length = 779

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/348 (37%), Positives = 201/348 (57%), Gaps = 33/348 (9%)

Query: 226 SDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIK 285
           SD   D  I  ++ ++     D  R  E E  +   +E  L+  +VGQE A+  +S A++
Sbjct: 444 SDTVTDQGIAAVVSRWTGVPVD--RMLEGERAKLLRMEDELRKSVVGQEPALKAVSNAVR 501

Query: 286 RKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVA 344
           R   G  D + P+  FLFLG +G+GKTEL K LA ++  D+K A +R+DMSE+ EKH VA
Sbjct: 502 RARAGLQDPNRPIGSFLFLGPTGVGKTELCKALARFLFDDEK-ALLRIDMSEFMEKHAVA 560

Query: 345 KLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKG 404
           +L+GAPPGY+G+++GG LT+ +++ P  V+LFDEV+KAH DV  +LLQ+ D+GRLTDG+G
Sbjct: 561 RLVGAPPGYVGYEEGGVLTEAVRRRPYQVILFDEVEKAHEDVFNILLQVLDDGRLTDGQG 620

Query: 405 KTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKD 464
           +T++ ++ + V+TSNL S+ +A        +GE      P + +                
Sbjct: 621 RTVDFRNTLIVLTSNLGSDVLAHL-----PDGESVESVRPEVMQ---------------- 659

Query: 465 HVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWD 524
                +++ HF R EFL R++EI+ F    K+++  +V  ++    +K LD+ NI +  D
Sbjct: 660 -----VVRNHF-RPEFLNRLDEIILFSRLQKADMGKIVEIQIGRL-RKLLDERNIQLRLD 712

Query: 525 IDVETILA-DGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFV 571
              E  LA +GYD  YGAR +K  ++R + + LA    +  I  G  V
Sbjct: 713 KGGEEWLANEGYDPVYGARPLKRVIQRALQNPLAGLLLEGTIHDGETV 760


>gi|295694806|ref|YP_003588044.1| ATPase AAA-2 domain-containing protein [Kyrpidia tusciae DSM 2912]
 gi|295410408|gb|ADG04900.1| ATPase AAA-2 domain protein [Kyrpidia tusciae DSM 2912]
          Length = 814

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/327 (38%), Positives = 202/327 (61%), Gaps = 24/327 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  R   +E+ L  R++GQ+ A+  +S AI+R   G  D   P+  F+FLG +G+GKT
Sbjct: 492 EEESERLLHMEEILHKRVIGQDEAVEAVSRAIRRARAGLKDPKRPIGSFIFLGPTGVGKT 551

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA  +  D+  A +R+DMSEY E+H  ++LIGAPPGY+G+++GGQLT+++++ P 
Sbjct: 552 ELARALAEAMFGDEN-AVVRIDMSEYMERHTTSRLIGAPPGYVGYEEGGQLTEKIRRKPY 610

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GRLTDGKG+T++ ++ + +MTSN+ +  I      
Sbjct: 611 SVVLLDEIEKAHPEVFNILLQVLDDGRLTDGKGRTVDFRNTVIIMTSNVGAQSI------ 664

Query: 432 LRKEGE-EFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
            R+ G   F+ R    S+ + +  D       K+ V++  LKR F R EFL RI+E++ F
Sbjct: 665 -RRGGPLGFAAR----SEEEDAYKD------MKNKVMEE-LKRQF-RPEFLNRIDEVIVF 711

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVE 549
              ++ ++  +V   ++   K+  D H+I+     D +  LA +G+D  YGAR +K  ++
Sbjct: 712 HALTQQDIMRIVDLMVDDLRKRLRD-HDIDFELTDDAKAFLAKEGFDPTYGARPLKRAIQ 770

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           R +  +L+ A     I KG  VR+  Q
Sbjct: 771 RHIEDRLSEALLNGTIVKGDRVRIDFQ 797


>gi|386309637|ref|YP_006005693.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
 gi|418243771|ref|ZP_12870225.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           palearctica PhRBD_Ye1]
 gi|433551271|ref|ZP_20507314.1| ClpB protein [Yersinia enterocolitica IP 10393]
 gi|318604489|emb|CBY25987.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
 gi|330863598|emb|CBX73708.1| chaperone protein clpB [Yersinia enterocolitica W22703]
 gi|351776724|gb|EHB19022.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           palearctica PhRBD_Ye1]
 gi|431788370|emb|CCO70354.1| ClpB protein [Yersinia enterocolitica IP 10393]
          Length = 857

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 212/369 (57%), Gaps = 37/369 (10%)

Query: 190 FSALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQ 249
            S L YG      ++ EL  +  A   ++  +  +  +   +A I ++L ++      + 
Sbjct: 498 MSELQYG------KIPELEKQLAAATALEGKTMKLLRNRVTEAEIAEVLARWT--GIPVS 549

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  E+E  +   +EQ L  R++GQ+ A+  +S AI+R   G +D + P+  FLFLG +G+
Sbjct: 550 RMLESERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGV 609

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTEL K LA ++  D  +A +R+DMSE+ EKH V++L+GAPPGY+G+++GG LT+ +++
Sbjct: 610 GKTELCKALATFLF-DSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRR 668

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I   
Sbjct: 669 RPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQ-- 726

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
                   E F +R+ S  K                 +V  ++  HF R EF+ RI+E+V
Sbjct: 727 --------ERFGERSYSEMK----------------EMVMEVVTHHF-RPEFINRIDEVV 761

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F P  ++ L ++   +L    K+  ++     +    +E +   G+D  YGAR +K  +
Sbjct: 762 VFHPLGRAHLASIASIQLERLYKRLEERGYQVTITQPALEFLGETGFDPVYGARPLKRAI 821

Query: 549 ERQVVSQLA 557
           ++++ + LA
Sbjct: 822 QQEIENPLA 830


>gi|305678729|ref|YP_003864365.1| ClpK [Klebsiella pneumoniae]
 gi|223587487|gb|ACM92030.1| ClpK [Klebsiella pneumoniae]
          Length = 952

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 198/321 (61%), Gaps = 32/321 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGGKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  I+ D+  A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESIYGDE-HALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 RK-EGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF- 490
           R+  GEE+ K     +K++                V  +L+ HF R EFL RI+EI+ F 
Sbjct: 777 REAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDEIIVFH 814

Query: 491 --LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHE 547
                 K E+  +V  +L+  A+ A  +  + + +D   ++    +GY   +GAR +K  
Sbjct: 815 ALHALGKEEIRHIVGLQLDRVARSAASQ-GVTLTFDQTLIDHFAEEGYKPEFGARELKRL 873

Query: 548 VERQVVSQLAAAHEKSVIGKG 568
           +  ++ + LA       IGKG
Sbjct: 874 IRSELETALAREMLGGGIGKG 894


>gi|78189926|ref|YP_380264.1| ATPase [Chlorobium chlorochromatii CaD3]
 gi|78172125|gb|ABB29221.1| ATPase [Chlorobium chlorochromatii CaD3]
          Length = 439

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 192/318 (60%), Gaps = 23/318 (7%)

Query: 256 ERRKYPL-EQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTEL 313
           ER+K  L E  L  R++GQ  A+  +S A+KR   G  D+  P+  F+FLG +G+GKTEL
Sbjct: 128 ERQKLLLIEDELHKRVIGQHEAVTAVSEAVKRSRAGMGDEKRPIGSFIFLGPTGVGKTEL 187

Query: 314 AKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAV 373
           A+ LA Y+  D ++A IR+DMSEY E H V++L+GAPPGY+G+++GGQLT+ +++ P +V
Sbjct: 188 ARTLADYLF-DDEDAMIRIDMSEYMESHNVSRLVGAPPGYVGYEEGGQLTEAVRRKPFSV 246

Query: 374 VLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLR 433
           VL DE++KAHPDV  +LLQ+ D+GRLTD KG+T+  K+ I +MTSN+ +  I     QL 
Sbjct: 247 VLLDEIEKAHPDVFNILLQILDDGRLTDSKGRTVNFKNCIIIMTSNIGAQLIQSELEQL- 305

Query: 434 KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPF 493
               E +KR   ++  Q         + F+      +LK+   R EFL RI+E++ F P 
Sbjct: 306 ----EGAKRDEVLAGLQ--------EKLFQ------LLKQKV-RPEFLNRIDEVILFTPL 346

Query: 494 SKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQVV 553
           ++ +L  +V  +     + AL +H    + D  +  +   G+D  +GAR +K  ++R++ 
Sbjct: 347 TRDDLQKIVLIQFEHIQEAALRQHITLTISDEAIVWLAKTGFDPAFGARPLKRVMQRKIT 406

Query: 554 SQLAAAHEKSVIGKGSFV 571
           ++L+       + +G  V
Sbjct: 407 NKLSELILSGAVQEGESV 424


>gi|312897982|ref|ZP_07757391.1| ATP-dependent chaperone protein ClpB [Megasphaera micronuciformis
           F0359]
 gi|310620907|gb|EFQ04458.1| ATP-dependent chaperone protein ClpB [Megasphaera micronuciformis
           F0359]
          Length = 873

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/385 (35%), Positives = 210/385 (54%), Gaps = 39/385 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YG +      +E  L    D   K+   H+  +   + +I Q++ ++      + +
Sbjct: 512 SELKYGKLPE----LERQLAEQEDLLSKEKDSHLLKEEVSEEDIAQVVSRWT--GIPVTK 565

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
               E  +   L+  L  R+VGQ+ A+ ++S AI R   G  D + P+  F+FLG +G+G
Sbjct: 566 MMTGEREKLLHLDDTLHQRVVGQDEAVRVVSDAIMRARAGIKDPNRPIGSFIFLGPTGVG 625

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTELAK LA  +  D +   +R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ +++ 
Sbjct: 626 KTELAKALAESLFDDDRN-IVRIDMSEYMEKHTVSRLIGAPPGYVGYDEGGQLTEAVRRH 684

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P +V+L DE++KAHPD+  VLLQ+ D+GRLTDGKG+ +  K+ + +MTSNL S+EI + A
Sbjct: 685 PYSVILLDEIEKAHPDIFNVLLQILDDGRLTDGKGRVVNFKNTVIIMTSNLGSHEILEAA 744

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
                   +F                 T  +  KD     ILK +F R EFL RI++IV 
Sbjct: 745 --------DFE----------------TAEKSVKD-----ILKSYF-RPEFLNRIDDIVV 774

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEV 548
           F    K ++  +    L   + +   + NI + W D  +E +   GY+  +GAR ++  +
Sbjct: 775 FKALKKEQVFDIARILLEHLSNRLQKQMNITLTWTDRALEELSDKGYEPQFGARPLRRLI 834

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL 573
              V + L+       IG+G  VR+
Sbjct: 835 THTVETALSRDIISGRIGEGQTVRI 859


>gi|300864313|ref|ZP_07109191.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
 gi|300337702|emb|CBN54337.1| ATPase AAA-2 [Oscillatoria sp. PCC 6506]
          Length = 904

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 187/307 (60%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E ++   LE+ L  R++GQ  A+  +SAAI+R   G  D   P+  FLF+G +G+GKT
Sbjct: 581 ESERQKLLQLEKHLHQRVIGQHEAVEAVSAAIRRARAGMKDPGRPIGSFLFMGPTGVGKT 640

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D  +A +R+DMSEY EKH V++L+GAPPGY+G+D+GGQL++ +++ P 
Sbjct: 641 ELARALAEFLF-DTDDAIVRIDMSEYMEKHSVSRLVGAPPGYVGYDEGGQLSEAVRRHPY 699

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDEV+KAHPDV  +LLQ+ D+GR+TD +G+ ++ ++ + VMTSN+ S+ I   A  
Sbjct: 700 SVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRVVDFRNTVIVMTSNIGSDYILDVA-- 757

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                               S  ++   R      V   L+ HF R EFL R+++I+ F 
Sbjct: 758 -----------------GDDSKYEMMYKR------VTDALRSHF-RPEFLNRVDDIILFH 793

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             SK+EL  +V  ++    ++ L    IN+      +  +AD GYD  YGAR +K  ++R
Sbjct: 794 TLSKTELRQIVSIQVK-RIERLLGDQKINLDLSEAAKNYIADVGYDPVYGARPLKRAIQR 852

Query: 551 QVVSQLA 557
           ++ + LA
Sbjct: 853 ELENPLA 859


>gi|261856613|ref|YP_003263896.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
 gi|261837082|gb|ACX96849.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
          Length = 860

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/321 (38%), Positives = 195/321 (60%), Gaps = 36/321 (11%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E+ +   +E+ L  R+VGQ+ A+  ++ AI+R   G +D + P   FLFLG +G+GKT
Sbjct: 556 EGEKDKLLRMEEALATRVVGQDEAVKSVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKT 615

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +E+ +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 616 ELTKALANFLF-DTEESMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRKPY 674

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + VMTSNL S     H +Q
Sbjct: 675 SVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGS-----HLIQ 729

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
              E  ++     ++ +  G         HF              R EF+ RI+E+V F 
Sbjct: 730 EMAETNDYDAMKTAVLEVVGG--------HF--------------RPEFINRIDEVVVFH 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
           P  + ++  +V  +++F  +K L + ++ I   I    +L + G+D  YGAR +K  +++
Sbjct: 768 PLGREQIRQIVDIQIDFL-RKRLAERDLQIELTIQALDLLGEAGFDPVYGARPLKRAIQQ 826

Query: 551 QVVSQLAAAHEKSVIGKGSFV 571
           ++ + LA A     I KG F+
Sbjct: 827 KLENTLAQA-----ILKGEFM 842


>gi|168701615|ref|ZP_02733892.1| ATPase AAA-2 domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 871

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/321 (38%), Positives = 193/321 (60%), Gaps = 28/321 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E+ +   LE  L  R++GQ+ A+  +  A+ R  +G  D + P+  F+FLG +G+GKT
Sbjct: 555 EGEKEKLLHLEAELHKRVIGQDEAVTAVGEAVVRARSGLKDPNRPIGSFIFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D+K A IR+DMSEYQEKH V++L+GAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 615 ELARALAEFLFDDEK-AMIRIDMSEYQEKHTVSRLVGAPPGYVGYDEGGQLTEAVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVLFDE++KAHPDV   LLQ+ D+GRLTDG+G+T++ K+ I +MTSN+ S  I Q+   
Sbjct: 674 SVVLFDEIEKAHPDVFNTLLQVLDDGRLTDGQGRTVDFKNTIVIMTSNVGSQRILQY--- 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G+++     R      V   L++ F R EFL RI+EI+ F 
Sbjct: 731 ------------------KGTHIGEVYDRMRA--AVMEELRKGF-RPEFLNRIDEIIVFH 769

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET-ILADGYDVHYGARSIKHEVER 550
             ++++L  ++  +L    +K L +  I +      +  ++  GYD  YGAR +K  +++
Sbjct: 770 ALTEADLTKIIEVQLGNL-RKRLAERKIGLALTEGAKAHMVRVGYDPAYGARPLKRTIQK 828

Query: 551 QVVSQLAAAHEKSVIGKGSFV 571
           +V + LA    K  +  G  V
Sbjct: 829 EVETPLARLLLKGEVADGGSV 849


>gi|88602573|ref|YP_502751.1| ATPase AAA [Methanospirillum hungatei JF-1]
 gi|88188035|gb|ABD41032.1| ATPase AAA-2 [Methanospirillum hungatei JF-1]
          Length = 865

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/314 (39%), Positives = 200/314 (63%), Gaps = 28/314 (8%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           + R  ++E+++   LE  L  R+VGQ+ AI  +S AI+R   G +D   P+  F+FLG++
Sbjct: 548 VSRMLQSEKQKLLTLEAELHKRVVGQDEAIRAVSDAIRRSRAGLSDSKRPIGSFIFLGTT 607

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA ++  ++  + +R+DMSEYQE+H V++L+GAPPGY+G+++ GQLT+ +
Sbjct: 608 GVGKTELAKALAEFLFNNEN-SMVRIDMSEYQERHTVSRLVGAPPGYVGYEESGQLTEAV 666

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+T++ K+ I +MTSN+ S+ I 
Sbjct: 667 RRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNTIIIMTSNIGSH-II 725

Query: 427 QHALQ--LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRI 484
           Q  L+    K  EE   +T                   KD V   +LK+   R EFL RI
Sbjct: 726 QENLEHVTDKNREEIYDQT-------------------KDLVFD-LLKKTI-RPEFLNRI 764

Query: 485 NEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARS 543
           +E++ F P +  E+ T+V  +L+   +K L+K+++   V +  +  I   G+D  +GAR 
Sbjct: 765 DEVIMFRPLTMDEIRTVVKLQLDI-VRKMLEKNDVRFTVTEKAIGHIANLGFDPLFGARP 823

Query: 544 IKHEVERQVVSQLA 557
           IK  ++R ++++L+
Sbjct: 824 IKRVIQRNLLNELS 837


>gi|422022041|ref|ZP_16368550.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
 gi|414097791|gb|EKT59444.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
          Length = 857

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/329 (37%), Positives = 201/329 (61%), Gaps = 33/329 (10%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           D+ I +IL ++      + R  E+E  +   +E +L  R++GQ  A+  +S AI+R   G
Sbjct: 533 DSEIAEILARWT--GIPVSRMLESEREKLLRMEHQLHKRVIGQNEAVVAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A IR+DMSE+ EKH VA+L+GA
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKALANFMF-DSDDAMIRIDMSEFMEKHAVARLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+LFDE++KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRRPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I           E F +    IS  +            KD V++ 
Sbjct: 710 RNTVIIMTSNLGSDLIQ----------ESFGR----ISYPE-----------MKDMVME- 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVE 528
           +L R FR  EF+ RI+E+V F P  K+ +  +   +L+   K+ L++H   +      +E
Sbjct: 744 VLTRSFR-PEFINRIDEVVVFHPLDKANIANIANIQLSRLYKR-LEEHGYEVSATPAALE 801

Query: 529 TILADGYDVHYGARSIKHEVERQVVSQLA 557
            I   GYD  +GAR +K  +++++ + LA
Sbjct: 802 KIGEAGYDPIFGARPLKRAIQQEIENPLA 830


>gi|402702830|ref|ZP_10850809.1| chaperone ClpB [Rickettsia helvetica C9P9]
          Length = 857

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/385 (35%), Positives = 214/385 (55%), Gaps = 41/385 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YG++         ++K   +    DN G +    +E ++I  I+ +      D   
Sbjct: 500 SELKYGIIPE-------IMKKIQEAESMDNKGLLKEIVSE-SDIASIISRITGIPIDTML 551

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  R   +EQ+L++ ++GQ+ AI  +S A++R   G  D + PL  FLFLG +G+G
Sbjct: 552 SSERE--RLLVMEQKLRESVIGQDEAIKGVSDAVRRSRAGIQDINRPLGSFLFLGPTGVG 609

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL K LA ++  D + A +R+DMSEY EKH +++LIGAPPGY+G+D GG LT+ +++ 
Sbjct: 610 KTELTKALAGFLF-DDRNAILRIDMSEYMEKHAISRLIGAPPGYIGYDQGGVLTEAVRRR 668

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  V+LFDEV+KAHPD+  ++LQ+ DEGRLTD +G T++ K+ I V+TSNL +  +    
Sbjct: 669 PYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQ- 727

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
               KE E+  K                     KD V++ +  R   + EFL R++EI+ 
Sbjct: 728 ----KEDEDTYK--------------------VKDQVMEYV--RAVFKPEFLNRLDEIIL 761

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F   +++ +H +V  +L    KK L   NI + +D      LA+ GYD  +GAR +K  +
Sbjct: 762 FHRLNRNNIHDIVKIQLESL-KKILLAQNITLEFDESALNYLAEKGYDPSFGARPLKRLI 820

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL 573
           +R++ + LA       I  G  V++
Sbjct: 821 QREIQNNLAKMILAGEISSGKTVKI 845


>gi|50365236|ref|YP_053661.1| ATPase [Mesoplasma florum L1]
 gi|50363792|gb|AAT75777.1| ATPase subunit of ATP-dependant protease [Mesoplasma florum L1]
          Length = 711

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/291 (40%), Positives = 178/291 (61%), Gaps = 32/291 (10%)

Query: 269 RIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKE 327
           R+ GQ  AI  +S AI R  +G  D + P+  FLFLG +G+GKTE+A+ LA  +    K+
Sbjct: 421 RVKGQNQAIEAVSQAILRSRSGIKDPNKPIGSFLFLGPTGVGKTEVARSLADILFNSNKK 480

Query: 328 AFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVL 387
             +R+DMSEY EKH V+KLIG+PPGY+G+++GG+LT+ +++ P ++VLFDE++KAHPDV 
Sbjct: 481 -MVRIDMSEYMEKHSVSKLIGSPPGYVGYEEGGRLTEAVRRNPYSIVLFDEIEKAHPDVF 539

Query: 388 TVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSIS 447
            +LLQ+ DEGR+TD  GKT++ K+ I ++TSNL S  I ++                  S
Sbjct: 540 NILLQVLDEGRITDSLGKTVDFKNTIIILTSNLGSEYILKNG-----------------S 582

Query: 448 KSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELN 507
            S+ S +            +Q  L +HF R EFL RI+ +V F P SK  +  +V +ELN
Sbjct: 583 TSEESKI-----------AIQAELLKHF-RPEFLNRIDNVVVFNPLSKENVSEIVTKELN 630

Query: 508 FWAKKALDKHNINIVWDIDVET-ILADGYDVHYGARSIKHEVERQVVSQLA 557
             + +  +  N  + +D+  +  I+ +GYD  +GAR IK  +E+ + + LA
Sbjct: 631 TLSARLENDKNFFLTFDMKAKNKIIDEGYDSQFGARPIKRYIEKNIETLLA 681


>gi|59711173|ref|YP_203949.1| protein disaggregation chaperone [Vibrio fischeri ES114]
 gi|59479274|gb|AAW85061.1| protein disaggregation chaperone [Vibrio fischeri ES114]
          Length = 861

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 199/347 (57%), Gaps = 31/347 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I ++L +  +    + +  E E  +   +E+ L  R++GQ  A+  +S AI+R   G
Sbjct: 533 DAEIAEVLSR--QTGIPVNKMLEGERDKLLKMEEVLHHRVIGQAEAVEAVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D ++A +R+DMSE+ EKH VA+L+GA
Sbjct: 591 LSDPNRPIGSFLFLGPTGVGKTELCKSLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           K+ + +MTSNL S +I QH  +L   G +                           VV  
Sbjct: 710 KNTVIIMTSNLGSEKIQQHFGELNYAGIK--------------------------EVVMD 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ +HF R EFL R++E V F P ++  +  +   +L    K+  +K     V D  +  
Sbjct: 744 VVSQHF-RPEFLNRVDETVVFHPLAQEHIKNIASIQLQRLEKRLNEKDYQLQVTDEALNL 802

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           I   G+D  YGAR +K  ++  + + LA       +  G  ++L V+
Sbjct: 803 IAEAGFDPVYGARPLKRAIQTYIENPLAQDILSGKLRVGEVIKLKVK 849


>gi|42524440|ref|NP_969820.1| ABC transporter ATPase [Bdellovibrio bacteriovorus HD100]
 gi|54035764|sp|Q6MIV0.1|CLPB_BDEBA RecName: Full=Chaperone protein ClpB
 gi|39576649|emb|CAE80813.1| ATPase with chaperone activity, two ATP-binding domains
           [Bdellovibrio bacteriovorus HD100]
          Length = 855

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 189/307 (61%), Gaps = 33/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E ++   +E  LK R+VGQ+ A+ I++ AI+R     +D + P+  F+FLG +G+GKT
Sbjct: 555 ESESQKLLHMEDSLKHRVVGQDHALTIVADAIRRARAEISDPNRPIGTFMFLGPTGVGKT 614

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           E  K LA ++  D ++A +R+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 615 ETVKALAEFLF-DDEQAVVRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTESVRRRPY 673

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ K+ + +MTSN+ S  I      
Sbjct: 674 SVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVLIMTSNVGSQSI------ 727

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                                 LD  +S + K   V   L+  F R EFL RI+EIV F 
Sbjct: 728 ----------------------LDPGMSENQKREAVNEALRERF-RPEFLNRIDEIVMFK 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
              ++++  +V  +L+  A++ L    I I ++ +    LA  GYD  YGAR +K  ++ 
Sbjct: 765 SLGEAQISGIVKVQLDLVAQR-LRAKKIGIDFNQEAIDFLAKKGYDPIYGARPLKRVIQT 823

Query: 551 QVVSQLA 557
           ++++ L+
Sbjct: 824 ELLNPLS 830


>gi|383500999|ref|YP_005414358.1| clpB protein [Rickettsia australis str. Cutlack]
 gi|378932010|gb|AFC70515.1| clpB protein [Rickettsia australis str. Cutlack]
          Length = 858

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/385 (35%), Positives = 216/385 (56%), Gaps = 41/385 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YG++         ++K   +    DN G +    +E ++I  I+ +      D   
Sbjct: 500 SELKYGIIPE-------IMKKIQEAESMDNKGLLKEIVSE-SDIASIISRITGIPIDTML 551

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  R   +EQ+L++ ++GQ+ AI  +S A++R   G  D + PL  FLFLG +G+G
Sbjct: 552 SSERE--RLLVMEQKLRESVIGQDEAIKGVSDAVRRSRAGIQDINRPLGSFLFLGQTGVG 609

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL K LA ++  D + A +R+DMSEY EKH +++LIGAPPGY+G+D GG LT+ +++ 
Sbjct: 610 KTELTKALAGFLF-DNRNAILRIDMSEYMEKHTISRLIGAPPGYIGYDQGGVLTEAVRRR 668

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  V+LFDEV+KAHPD+  ++LQ+ DEGRLTD +G T++ K+ I V+TSNL +  +    
Sbjct: 669 PYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGAEILVNQ- 727

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
               KE E+  K                     KD V++ +  +   + EFL R++EI+ 
Sbjct: 728 ----KEDEDTYK--------------------VKDEVMKYV--KEVFKPEFLNRLDEIIL 761

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F   +++ +H +V  +L    KK L + NI + +D      LA+ GYD  +GAR +K  +
Sbjct: 762 FHRLNRNNIHDIVKIQLGSL-KKILLQQNIILGFDESALNYLAEKGYDPSFGARPLKRLI 820

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL 573
           +R++ + LA       I  G+ V++
Sbjct: 821 QREIQNNLAKMILAGEISSGNIVKI 845


>gi|375264537|ref|YP_005021980.1| ClpB protein [Vibrio sp. EJY3]
 gi|369839861|gb|AEX21005.1| ClpB protein [Vibrio sp. EJY3]
          Length = 857

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 188/306 (61%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E  L  R++GQ  A+ +++ AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEDVLHQRVIGQVEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAI 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G                          K+ V++ ++ +HF R EFL R++E V F 
Sbjct: 732 LDYQG-------------------------IKNEVME-VVSKHF-RPEFLNRVDETVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  K  + ++   +L    K+  +K     V D  +E I   G+D  YGAR +K  +++ 
Sbjct: 765 PLGKEHIKSIASIQLERLHKRLAEKDYDLEVGDEALELIAQVGFDPVYGARPLKRAIQQN 824

Query: 552 VVSQLA 557
           V + LA
Sbjct: 825 VENPLA 830


>gi|350530312|ref|ZP_08909253.1| hypothetical protein VrotD_04277 [Vibrio rotiferianus DAT722]
          Length = 857

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 188/306 (61%), Gaps = 29/306 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E+ L  R++GQ  A+ ++S AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 553 EAEKEKLLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKT 612

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 613 ELCKTLASFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S  I ++   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFAT 731

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           L  +G             +   +DV +S+HF              R EFL R++E V F 
Sbjct: 732 LDYQG------------IKNEVMDV-VSKHF--------------RPEFLNRVDESVVFH 764

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  +  + ++   +L   AK+  +K     V D  ++ I   G+D  YGAR +K  +++ 
Sbjct: 765 PLGQEHIKSIASIQLERLAKRLEEKGYQLEVSDKALDLIAQVGFDPVYGARPLKRAIQQN 824

Query: 552 VVSQLA 557
           V + LA
Sbjct: 825 VENPLA 830


>gi|118444397|ref|YP_877171.1| negative regulator of genetic competence clpC/mecB [Clostridium
           novyi NT]
 gi|118134853|gb|ABK61897.1| Negative regulator of genetic competence clpC/mecB [Clostridium
           novyi NT]
          Length = 813

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/356 (37%), Positives = 212/356 (59%), Gaps = 23/356 (6%)

Query: 223 HIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISA 282
           H+ ++   +  I +++  ++    +   EKEA+  R   LE+ L  R++GQ  A+  I+ 
Sbjct: 469 HMVTEIVSEDQIAEVVSTWSNVPVEKLTEKEAD--RLLKLEETLHKRVIGQNEAVKSIAR 526

Query: 283 AIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKH 341
           A++R   G  D   P+  F+FLG +G+GKTEL+K LA  +  D+    IR+DMSEY EKH
Sbjct: 527 AVRRARVGLKDSKRPIGSFIFLGPTGVGKTELSKALAEAMFGDENN-MIRIDMSEYMEKH 585

Query: 342 EVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTD 401
            V++L+G+PPGY+GHD+GGQLT+++++ P +V+LFDE++KAHP+V  +LLQ+ ++GRLTD
Sbjct: 586 AVSRLVGSPPGYVGHDEGGQLTEQVRRHPYSVILFDEIEKAHPEVFNILLQILEDGRLTD 645

Query: 402 GKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRH 461
            KGKT++ K+ I ++TSN+ ++ I +             + T   S+S+    D      
Sbjct: 646 SKGKTVDFKNTIIILTSNVGASRINK-------------QNTLGFSRSEDEAEDEY--EK 690

Query: 462 FKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINI 521
            KD+V++  LK  F R EFL RI++I+ F    +  L  +V   L+  + +  DK +I I
Sbjct: 691 MKDNVMEE-LKNSF-RPEFLNRIDDIIVFHSLDEENLKEIVKLMLDEVSNRLKDK-DIYI 747

Query: 522 VWDIDVETILA-DGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
            +D + E +L   G DV YGAR ++  + R +  +L+    K VI KG  V   V+
Sbjct: 748 DFDDETEKLLVKKGIDVTYGARPLRRTITRIIEDKLSEEILKGVIKKGDKVYTTVE 803


>gi|377564982|ref|ZP_09794290.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
           NBRC 100414]
 gi|377527870|dbj|GAB39455.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Gordonia sputi
           NBRC 100414]
          Length = 861

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 187/306 (61%), Gaps = 33/306 (10%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LE  L DR++GQ+ A+  ++ A++R   G +D + P+  FLFLG +G+GKTE
Sbjct: 513 EEREKLLGLENTLHDRVIGQDKAVTAVAEAVRRARAGLSDPNRPIGSFLFLGPTGVGKTE 572

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  +  D+ +  IR DMSE+QEKH VA+L+GAPPGY+G+DD GQLT ++++ P +
Sbjct: 573 LAKALAAAVFGDE-DRMIRFDMSEFQEKHNVARLVGAPPGYVGYDDAGQLTDKVRRQPYS 631

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+LFDE++KAHPDV  VLLQL D+GR+TDG+G+T++ K+ + +MTSN+ S+      L L
Sbjct: 632 VILFDEIEKAHPDVFNVLLQLLDDGRVTDGQGRTVDFKNTLVIMTSNIGSD------LIL 685

Query: 433 RKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLP 492
                +  K  P                      V  +L++ F R EFL RI+E V F  
Sbjct: 686 NAPDGDVEKVVPD---------------------VMDLLRQRF-RPEFLNRIDETVVFDR 723

Query: 493 FSKSELHTLVCRELNFWAKKALDKHNINI-VWDIDVETILADGYDVHYGARSIKHEVERQ 551
             K++L  +V   L+   ++ L   +I + V D   + +  +GY   +GAR ++  +++Q
Sbjct: 724 LDKTQLRQIVDLTLD-GTRRMLKSQSIGLDVTDAAKDQLAEEGYQPEFGARPLRRLIQKQ 782

Query: 552 VVSQLA 557
           + ++L+
Sbjct: 783 LDNELS 788


>gi|346312111|ref|ZP_08854105.1| hypothetical protein HMPREF9452_01974 [Collinsella tanakaei YIT
           12063]
 gi|345899205|gb|EGX69056.1| hypothetical protein HMPREF9452_01974 [Collinsella tanakaei YIT
           12063]
          Length = 891

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/308 (41%), Positives = 187/308 (60%), Gaps = 24/308 (7%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E RR    E  LK RI+GQ+ A+  ++ AI+R  +   D   P   F+FLG +G GKT
Sbjct: 533 EDESRRLLQCESVLKSRIIGQDEAVQAVAKAIRRSRSPLKDPRRPGGSFIFLGPTGTGKT 592

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+    K+A I  DMSE+  ++EV+KLIG+PPGY+GH++GGQLTK +++ P 
Sbjct: 593 ELAKTLAEYLF-GSKDALISFDMSEFSSEYEVSKLIGSPPGYVGHEEGGQLTKAVRRHPY 651

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA-L 430
           +VVLFDE++KAHPD+  +LLQ+ DEGRLTDG+GKT++ ++ + +MTSN+ + EIAQ A +
Sbjct: 652 SVVLFDEIEKAHPDIFNILLQVLDEGRLTDGQGKTVDFRNTVIIMTSNVGAREIAQDATV 711

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
                GE            QG   D    R   +      LKR F R EFL RI++IV F
Sbjct: 712 GFGTTGE------------QGLTADEIRGRAMGE------LKRLF-RPEFLNRIDDIVVF 752

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVE 549
              +   L + + + L    ++ L  + +NIV  D  VE I+++G D+  GAR ++  ++
Sbjct: 753 KKLAGESLAS-IAKLLVDDLRQRLIANGMNIVLTDAAVEKIVSEGTDLTNGARPLRRAIQ 811

Query: 550 RQVVSQLA 557
           R +   L+
Sbjct: 812 RLIEDPLS 819


>gi|350273085|ref|YP_004884398.1| clpB protein [Rickettsia japonica YH]
 gi|348592298|dbj|BAK96259.1| clpB protein [Rickettsia japonica YH]
          Length = 857

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/385 (35%), Positives = 216/385 (56%), Gaps = 41/385 (10%)

Query: 191 SALHYGVVAGNTEVVELLLKSGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQR 250
           S L YG++         ++K   +    DN G +    +E +++  I+ +      D   
Sbjct: 500 SELKYGIIPE-------IMKKLQEAESMDNKGLLKEIVSE-SDVASIISRITGIPIDTML 551

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIG 309
             E E  R   +EQ+L++ ++GQ+ AI  +S A++R   G  D +HPL  FLFLG +G+G
Sbjct: 552 SSERE--RLLVMEQKLRESVIGQDEAIKGVSDAVRRSRAGIQDINHPLGSFLFLGPTGVG 609

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL K LA ++  D + A +R+DMSEY EKH +++LIGAPPGY+G+D GG LT+ +++ 
Sbjct: 610 KTELTKALAGFLF-DDRNAILRIDMSEYMEKHAISRLIGAPPGYIGYDQGGVLTEAVRRR 668

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P  V+LFDEV+KAHPD+  ++LQ+ DEGRLTD +G T++ K+ I V+TSNL +       
Sbjct: 669 PYQVILFDEVEKAHPDIFNIMLQILDEGRLTDSQGITVDFKNTIIVLTSNLGA-----EI 723

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
           L  +KE E+  K                     KD V++ +  +   + EFL R++EI+ 
Sbjct: 724 LVNQKEDEDTYK--------------------VKDEVMECV--KAVFKPEFLNRLDEIIL 761

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F   +++ +H +V  +L    KK L   NI + +D      LA+ GYD  +GAR +K  +
Sbjct: 762 FHRLNRNNIHDIVKIQLESL-KKILLAQNIILEFDESALNYLAEKGYDPSFGARPLKRLI 820

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRL 573
           +R++ + LA       I  G  V++
Sbjct: 821 QREIQNNLAKMILAGEISSGKTVKI 845


>gi|167629429|ref|YP_001679928.1| chaperone clpb [Heliobacterium modesticaldum Ice1]
 gi|167592169|gb|ABZ83917.1| chaperone clpb [Heliobacterium modesticaldum Ice1]
          Length = 884

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 201/337 (59%), Gaps = 36/337 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   L + L +R+VGQE A+ +++ A+ R  +G  D   P+  F+FLG +G+GKT
Sbjct: 563 EGEREKLLRLGEILHERVVGQEEAVQLVTDAVLRARSGIKDPRRPIGAFIFLGPTGVGKT 622

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EKH V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 623 ELAKALAQSLF-DSEENLIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPY 681

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+LFDE++KAHPDV  +LLQ+ D+GR+TD +G+T++ K+ + +MTSN+ S    QH L 
Sbjct: 682 SVILFDEIEKAHPDVFNILLQILDDGRVTDSQGRTVDFKNTVIIMTSNIGS----QHLL- 736

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                             +G+  D  I  H +D V+   L+ HF R EFL R+++++ F 
Sbjct: 737 ------------------EGATEDGEIRPHARDQVMGS-LRTHF-RPEFLNRVDDVILFK 776

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILA-DGYDVHYGARSIKHEVER 550
           P +  E+ T +   L    +K L +  I++      ++ +A +G+D  YGAR +K  ++R
Sbjct: 777 PLTFREI-TAIIDILTRDLQKRLAQRRISLTLTEAAKSHIAREGFDPIYGARPLKRYLQR 835

Query: 551 QVVSQLAAAHEKSVIGKGSFV-------RLYVQWSKE 580
            V + +A A     +G G  +       RL V+ + E
Sbjct: 836 HVETPVARALIAGSVGDGGRIMVDERDGRLQVEQANE 872


>gi|365156188|ref|ZP_09352520.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
 gi|363627557|gb|EHL78425.1| chaperone ClpB [Bacillus smithii 7_3_47FAA]
          Length = 865

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/308 (39%), Positives = 191/308 (62%), Gaps = 28/308 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LEQ L++R++GQE A+ ++S A+ R   G  D + P+  FLFLG +G+GKT
Sbjct: 559 EGEREKLLRLEQILQNRVIGQEEAVKLVSDAVLRARAGIKDPNRPIGSFLFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA  +  D +E  IR+DMSEY EK  V++LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 619 ELAKTLAEALF-DSEEQMIRIDMSEYMEKFSVSRLIGAPPGYVGYEEGGQLTEAIRRKPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHP+V  +LLQ+ D+GR+TD +G+T++CK+ + +MTSNL S+    + L 
Sbjct: 678 SVVLLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDCKNTVVIMTSNLGSS----YLLD 733

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
            ++EG+                    I    K+ V+   LK HF R EFL R+++I+ F 
Sbjct: 734 RKEEGD--------------------IQPETKEKVLNE-LKHHF-RPEFLNRVDDIILFK 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P +   +  +V + L+   ++  D+     V +   + I  +G+D  YGAR +K  ++ Q
Sbjct: 772 PLTMENVEAIVEKLLSELKQRLKDQELDLRVTENAKKLIAKEGFDPVYGARPLKRFIQHQ 831

Query: 552 VVSQLAAA 559
           V ++LA A
Sbjct: 832 VETKLARA 839


>gi|254292513|ref|YP_003058536.1| ATP-dependent chaperone ClpB [Hirschia baltica ATCC 49814]
 gi|254041044|gb|ACT57839.1| ATP-dependent chaperone ClpB [Hirschia baltica ATCC 49814]
          Length = 873

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/353 (36%), Positives = 200/353 (56%), Gaps = 40/353 (11%)

Query: 211 SGADPTVKDNSGHIPSDYAEDANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRI 270
           S A+    + SG +  +  +   I  ++ ++     D  +  E E  +   +E  L  R+
Sbjct: 515 SAAETAGDNTSGSLVKEVVDAEAIASVVSRWTGIPVD--KMMEGEREKLLSMEDNLSQRV 572

Query: 271 VGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAF 329
           VGQ+ A+  +S A++R   G  D   P+  F+F+G +G+GKTEL K LA ++  D + A 
Sbjct: 573 VGQDEALEAVSNAVRRARAGLQDPSRPIGSFMFVGPTGVGKTELTKALAEFLF-DDESAV 631

Query: 330 IRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTV 389
           +RLDMSEY EKH V+++IGAPPGY+G+++GG LT+ +++ P  V+LFDE++KAHPDV   
Sbjct: 632 LRLDMSEYMEKHAVSRMIGAPPGYVGYEEGGALTEAVRRRPYQVILFDEIEKAHPDVFNT 691

Query: 390 LLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKS 449
           LLQ+ D+GRLTDG+G+T+   + + VMTSNL +  +A  A +     +E S+        
Sbjct: 692 LLQVLDDGRLTDGQGRTVNFNNTLIVMTSNLGAQALAADASE-----DEISEDAR----- 741

Query: 450 QGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFW 509
                          H V   ++ HF R EFL RI+E+V+F    ++E+  +V  +L   
Sbjct: 742 ---------------HSVMTSIQGHF-RPEFLNRIDEVVFFKRLGRAEIDRIVGVQL--- 782

Query: 510 AKKALDK--HNINIVWDIDVETI--LAD-GYDVHYGARSIKHEVERQVVSQLA 557
             K LDK   +  I  DID   +  LAD GYD  YGAR +K  ++++V   LA
Sbjct: 783 --KRLDKLLEDRRITMDIDQAAMKWLADKGYDPVYGARPLKRAIQKEVQDPLA 833


>gi|154151146|ref|YP_001404764.1| ATPase [Methanoregula boonei 6A8]
 gi|153999698|gb|ABS56121.1| ATPase AAA-2 domain protein [Methanoregula boonei 6A8]
          Length = 863

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/342 (37%), Positives = 209/342 (61%), Gaps = 36/342 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           ++E  +   LE  L  R+VGQ+ AI  +S AI+R   G  D   P+  F+FLG++G+GKT
Sbjct: 551 QSEREKLLSLEAELHKRVVGQDEAIAAVSNAIRRSRAGLQDTKRPIGSFIFLGTTGVGKT 610

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  ++  + +R+DMSEYQE+H V++LIGAPPGY+G+++ GQLT+ +++ P 
Sbjct: 611 ELAKALAEFLFNNEN-SMVRIDMSEYQERHTVSRLIGAPPGYVGYEESGQLTEAVRRKPY 669

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +VVL DE++KAHPDV  +LLQ+ D+GRLTD KG+T++ K+ I +MTSN+ S+ I ++  +
Sbjct: 670 SVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRTVDFKNTIIIMTSNIGSHLIQENMEK 729

Query: 432 -LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
              K+ +E  +RT                   ++ V   +LK+   R EFL RI+EI+ F
Sbjct: 730 ATEKDRDELFERT-------------------REQVFD-LLKKTI-RPEFLNRIDEIIMF 768

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVE 549
            P ++ E+ T+V  +L    +K L+K ++ +      +  I A G+D  +GAR IK  ++
Sbjct: 769 KPLTEDEIRTVVEIQLE-GVQKMLEKSDVRLTATKKAIRFIAALGFDPQFGARPIKRVIQ 827

Query: 550 RQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEVSEDSAKGGII 591
           + ++++L+      +I +G      VQ  KE+  D   G ++
Sbjct: 828 KNLLNELS-----KMILEGK-----VQKDKEIVVDEKGGKLV 859


>gi|289522311|ref|ZP_06439165.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289504147|gb|EFD25311.1| negative regulator of genetic competence ClpC/MecB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 832

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 191/306 (62%), Gaps = 20/306 (6%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E +R   +E+ +  RI+ QE A++I++ AI+R  +G  D   P+  FLFLG +G+GKT
Sbjct: 499 EEESQRLLRMEEEIHKRIIDQEEAVSIVAKAIRRARSGLKDPQRPIGSFLFLGPTGVGKT 558

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL+K LA ++  D+  + IRLDMSE+ E+HEV+KLIGAPPGY+G+++GG+LT+ +++ P 
Sbjct: 559 ELSKALAEFMFGDEN-SMIRLDMSEFMERHEVSKLIGAPPGYVGYEEGGKLTEAVRRRPY 617

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AVVLFDE++KAHPDV  +LLQ+ ++GRLTDG+G+ ++ K+ + +MTSNL + ++      
Sbjct: 618 AVVLFDEIEKAHPDVFNILLQILEDGRLTDGQGRVVDFKNTVIIMTSNLGAQDLM----- 672

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                     + P+I  +  S   +      K+  +   ++R F R EF+ RI+EIV F 
Sbjct: 673 ----------KGPAIGFAAESEYQIDFEAAKKN--ILDAVRRTF-RPEFINRIDEIVVFK 719

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P  + EL  +V   ++  A++  +K     V D     +L  GY+  +GAR ++  ++R 
Sbjct: 720 PLGEKELLQIVDIMIDDVAERLAEKGIFIEVSDAAKGFLLKKGYEPKFGARPLRRTIQRY 779

Query: 552 VVSQLA 557
           +  +LA
Sbjct: 780 IEDRLA 785


>gi|217076366|ref|YP_002334082.1| ClpC ATPase [Thermosipho africanus TCF52B]
 gi|217036219|gb|ACJ74741.1| ClpC ATPase [Thermosipho africanus TCF52B]
          Length = 819

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/311 (38%), Positives = 194/311 (62%), Gaps = 19/311 (6%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L++ +E E  +   LE  L +R+VGQE A+  I+ +I+R  +G  D   P+ VFLFLG +
Sbjct: 489 LKKLEEGESEKLLKLEDALHNRVVGQEEAVRAIARSIRRARSGLKDPRRPVGVFLFLGPT 548

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELAK LA Y+  D+K A IR DMSEY EK  V++LIGAPPGY+G+++GG LT+R+
Sbjct: 549 GVGKTELAKTLAEYLFGDEK-ALIRFDMSEYMEKFSVSRLIGAPPGYVGYEEGGALTERV 607

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+GRLTD +G  ++ ++ I +MTSN+  ++I 
Sbjct: 608 RRRPFSVILFDEIEKAHPDVFNLLLQIMDDGRLTDSQGHVVDFRNTIIIMTSNIGGSQIV 667

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                         KR+     S+ SN++    +  K+ V++ + K+ F R EFL RI+E
Sbjct: 668 S------------GKRSLGFVDSKDSNIEF---KEMKEKVIEEV-KKTF-RPEFLNRIDE 710

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKH 546
           +V F   +++ +  ++   L    K+  +K  +  +     + ++ +GYD  YGAR +K 
Sbjct: 711 VVVFHKLTENHIREIIEILLKDIRKRLSEKGILLELSKSAKDFLVQEGYDPAYGARPLKR 770

Query: 547 EVERQVVSQLA 557
            ++R +   L+
Sbjct: 771 AIQRHIEDPLS 781


>gi|113953637|ref|YP_731101.1| ATP-dependent Clp protease Hsp 100, ATP-binding subunit ClpB
           [Synechococcus sp. CC9311]
 gi|113880988|gb|ABI45946.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB
           [Synechococcus sp. CC9311]
          Length = 863

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 226/388 (58%), Gaps = 37/388 (9%)

Query: 193 LHYGVVAGNTEVVELLLKSGADPTVKDNS--GHIPSDYAEDANIKQILQKYAEKYADLQR 250
           L YG +AG  +  +LL +  A     DN+    +  + +ED +I +++ K+      + +
Sbjct: 502 LEYGTLAGLQK--QLLAQEQALVETDDNAEKSLLREEVSED-DIAEVIAKWT--GIPVAK 556

Query: 251 EKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIG 309
             ++E  +   LE +L  R+VGQ  A+  ++ AI+R   G +D + P+  FLFLG +G+G
Sbjct: 557 LVQSEMEKLLKLEDQLHQRVVGQNQAVTAVADAIQRSRAGLSDPNQPIASFLFLGPTGVG 616

Query: 310 KTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKC 369
           KTEL+K LA  +  D ++A +R+DMSEY EKH V++LIGAPPGY+G++ GGQLT+ +++ 
Sbjct: 617 KTELSKALAAQLF-DSEDALVRIDMSEYMEKHTVSRLIGAPPGYVGYEAGGQLTEAVRRR 675

Query: 370 PNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHA 429
           P AV+LFDEV+KAHPDV  V+LQ+ D+GR+TDG+G+T++  +A+ ++TSN+ S  I    
Sbjct: 676 PYAVILFDEVEKAHPDVFNVMLQILDDGRVTDGQGRTVDFTNAVLILTSNIGSQSI---- 731

Query: 430 LQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVY 489
             L   G++          SQ   ++  ++   ++H           R EFL RI++ + 
Sbjct: 732 --LDLGGDD----------SQHQEMESRVNEALRNHF----------RPEFLNRIDDTII 769

Query: 490 FLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEV 548
           F    + EL  +V  ++    +K L +  +++    +    LA+ GYD  YGAR +K  +
Sbjct: 770 FHSLRRDELRLIVALQVERL-RKRLSERKLDLHISEEATDWLANAGYDPVYGARPLKRAI 828

Query: 549 ERQVVSQLAAAHEKSVIGKGSFVRLYVQ 576
           +R++ + +A A       +GS V++ V+
Sbjct: 829 QRELETPIAKAILSGAYEEGSSVQIQVK 856


>gi|260771761|ref|ZP_05880679.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
 gi|260613053|gb|EEX38254.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
          Length = 838

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/320 (37%), Positives = 194/320 (60%), Gaps = 34/320 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           EAE+ +   +E  L  R++GQ  A+ +++ AI+R   G +D + P+  FLFLG +G+GKT
Sbjct: 534 EAEKEKLLQMETFLHQRVIGQSEAVEVVADAIRRSRAGLSDPNRPIGSFLFLGPTGVGKT 593

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D ++A +R+DMSE+ EKH VA+L+GAPPGY+G+++GG LT+ +++ P 
Sbjct: 594 ELCKTLANFMF-DSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPY 652

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ ++ + +MTSNL S+ I      
Sbjct: 653 SVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQ----- 707

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                E F+       K Q                V  ++ +HF R EFL RI+E V F 
Sbjct: 708 -----ENFAHLDYQTMKEQ----------------VMEVVSKHF-RPEFLNRIDESVVFH 745

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P ++ ++ ++   +L    ++  DK    IV D  ++ +   G+D  YGAR +K  +++ 
Sbjct: 746 PLAQEQIKSIAFIQLERLRQRLADKDYGLIVSDDALDLVAHIGFDPVYGARPLKRAIQQT 805

Query: 552 VVSQLAAAHEKSVIGKGSFV 571
           + + LA    KS++  G F+
Sbjct: 806 IENPLA----KSIL-SGQFI 820


>gi|153011782|ref|YP_001372995.1| ATPase [Ochrobactrum anthropi ATCC 49188]
 gi|151563670|gb|ABS17166.1| ATPase AAA-2 domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 964

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/322 (40%), Positives = 196/322 (60%), Gaps = 30/322 (9%)

Query: 262 LEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTELAKQLAFY 320
           LE++L +R++GQE AI  ++ A++    G  +   P   FLFLG +G+GKTELAK LA  
Sbjct: 613 LEEKLHERVIGQEEAIRAVADAVRLARAGLREGRGPTATFLFLGPTGVGKTELAKTLAEV 672

Query: 321 IHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNAVVLFDEVD 380
           I  D+ +A IR+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +VVL DE++
Sbjct: 673 IFGDQ-DAIIRIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRRPYSVVLLDEIE 731

Query: 381 KAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQLRKEG-EEF 439
           KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I ++   L K G  EF
Sbjct: 732 KAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRN---LTKRGSSEF 788

Query: 440 SKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFLPFSKSELH 499
            +        Q S L               +L+ HF R EF+ RI+EI+ F   ++SE+ 
Sbjct: 789 DE------AKQKSEL-------------MEVLRGHF-RPEFINRIDEIIVFHSLNQSEIR 828

Query: 500 TLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVERQVVSQLAA 558
            +V  +LN   + AL    + +  D+  V+   A G+   +GAR ++  +  Q+ ++LA 
Sbjct: 829 QIVELQLNRVKRTAL-TQGVELELDVSVVDHFGAVGFRPEFGARELRRLIRSQLETELAR 887

Query: 559 AHEKSVIGKGSFVRLYVQWSKE 580
                 I  G  VR  V WS++
Sbjct: 888 EMLSGRIEDGDKVR--VAWSED 907


>gi|54035914|sp|Q9RVI3.2|CLPB_DEIRA RecName: Full=Chaperone protein ClpB
          Length = 852

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/307 (40%), Positives = 189/307 (61%), Gaps = 30/307 (9%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE++L  R++GQ+ AI  +S AI+R   G  D + PL  F+FLG SG+GKT
Sbjct: 543 EGEREKLLHLEEQLHGRVIGQDRAIVSVSDAIRRARAGLNDPNRPLGSFMFLGPSGVGKT 602

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA ++  D  +A +R+DMSEY EKH VA+LIGAPPGY+G ++GGQLT+ +++ P 
Sbjct: 603 ELAKALAEFLF-DSSDAMVRIDMSEYMEKHTVARLIGAPPGYVGFEEGGQLTEAVRRRPY 661

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + +MTSN+ S  I    L+
Sbjct: 662 AVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSNIGSPLI----LE 717

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +++ GE+                  TI     D      L+  F R EFL R+++I+ F 
Sbjct: 718 MQQRGEDAE----------------TIKSAVMDE-----LRGEF-RPEFLNRVDDIIVFD 755

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVER 550
             +  +L ++V  +L    ++ L +  I +    D +  LA+ GYD  YGAR ++  + +
Sbjct: 756 ALTAKDLQSIVDIQLGGL-RRRLAERRITLHLTEDAKDKLAELGYDPAYGARPLRRTISQ 814

Query: 551 QVVSQLA 557
            + + LA
Sbjct: 815 YIETPLA 821


>gi|21282209|ref|NP_645297.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
 gi|300912852|ref|ZP_07130294.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
 gi|418987425|ref|ZP_13535098.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1835]
 gi|81762804|sp|Q8NXY8.1|CLPC_STAAW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpC
 gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2]
 gi|300885956|gb|EFK81159.1| clpc ATPase [Staphylococcus aureus subsp. aureus TCH70]
 gi|377719213|gb|EHT43383.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Staphylococcus
           aureus subsp. aureus CIG1835]
          Length = 818

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/312 (39%), Positives = 189/312 (60%), Gaps = 23/312 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSS 306
           L +  E E  +   LE  L +R++GQ+ A+N IS A++R   G  D   P+  F+FLG +
Sbjct: 488 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 547

Query: 307 GIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRL 366
           G+GKTELA+ LA  +  D  +A IR+DMSE+ EKH V++L+GAP GY+GHDDGGQLT+++
Sbjct: 548 GVGKTELARALAESMFGDD-DAMIRVDMSEFMEKHAVSRLVGAPLGYVGHDDGGQLTEKV 606

Query: 367 KKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIA 426
           ++ P +V+LFDE++KAHPDV  +LLQ+ D+G LTD KG+T++ ++ I +MTSN+ + E+ 
Sbjct: 607 RRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQEL- 665

Query: 427 QHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINE 486
                   + + F+    S   S G + +       K+      LK  F R EFL R+++
Sbjct: 666 --------QDQRFAGFGGS---SDGQDYETIRKTMLKE------LKNSF-RPEFLNRVDD 707

Query: 487 IVYFLPFSKSELHTLVCRELNFWAKKALDKHNIN-IVWDIDVETILADGYDVHYGARSIK 545
           I+ F   +K EL  +V   +N    + L + NIN IV D   + I  +GYD  YGAR + 
Sbjct: 708 IIVFHKLTKEELKEIVTMMVNKLTNR-LSEQNINIIVTDKAKDKIAEEGYDPEYGARPLI 766

Query: 546 HEVERQVVSQLA 557
             +++ +   L+
Sbjct: 767 RAIQKTIEDNLS 778


>gi|84393598|ref|ZP_00992351.1| ClpB protein [Vibrio splendidus 12B01]
 gi|84375807|gb|EAP92701.1| ClpB protein [Vibrio splendidus 12B01]
          Length = 857

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/346 (36%), Positives = 202/346 (58%), Gaps = 31/346 (8%)

Query: 231 DANIKQILQKYAEKYADLQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENG 290
           DA I  +L K  +    + +  EAE+ +   +E  L  R++GQ  A+ ++S AI+R   G
Sbjct: 533 DAEIADVLSK--QTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAG 590

Query: 291 WTDDDHPL-VFLFLGSSGIGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGA 349
            +D + P+  FLFLG +G+GKTEL K LA ++  D  +A +R+DMSE+ EKH VA+L+GA
Sbjct: 591 LSDPNKPIGSFLFLGPTGVGKTELCKTLANFMF-DSDDAMVRIDMSEFMEKHSVARLVGA 649

Query: 350 PPGYLGHDDGGQLTKRLKKCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIEC 409
           PPGY+G+++GG LT+ +++ P +V+L DEV+KAHPDV  +LLQ+ D+GRLTDG+G+T++ 
Sbjct: 650 PPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDF 709

Query: 410 KDAIFVMTSNLASNEIAQHALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQP 469
           ++ + +MTSNL S+ I ++   L  +G                          K+ V++ 
Sbjct: 710 RNTVVIMTSNLGSSRIQENFNTLDYQG-------------------------IKNEVME- 743

Query: 470 ILKRHFRRDEFLGRINEIVYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVET 529
           ++ +HF R EFL R++E V F P  ++ + ++   +L    K+  D      V D  ++ 
Sbjct: 744 VVGKHF-RPEFLNRVDESVVFHPLGQAHIESIAAIQLEHLKKRMEDNGYELEVLDKALKL 802

Query: 530 ILADGYDVHYGARSIKHEVERQVVSQLAAAHEKSVIGKGSFVRLYV 575
           I   G+D  YGAR +K  +++ V + LA A     I     V+L V
Sbjct: 803 ISQVGFDPVYGARPLKRAIQQSVENPLAKAILAGKINPDKKVQLLV 848


>gi|220929532|ref|YP_002506441.1| ATPase AAA [Clostridium cellulolyticum H10]
 gi|219999860|gb|ACL76461.1| ATPase AAA-2 domain protein [Clostridium cellulolyticum H10]
          Length = 781

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/334 (37%), Positives = 192/334 (57%), Gaps = 26/334 (7%)

Query: 248 LQREKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLVFLFLGSSG 307
           +QR  E E  +   LE R+  R++GQE A+  ++ AI+R  +G+     P  F+F+G +G
Sbjct: 469 IQRLSEGESEKLMSLESRIHQRVIGQEKAVEGVAKAIRRSRSGFKKKKKPSSFIFVGPTG 528

Query: 308 IGKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLK 367
           +GKTEL + L+  +    +EA IRLDMSEY EKH V+KLIG+PPGY+G+DD GQLT++++
Sbjct: 529 VGKTELVRALSTELF-GSEEALIRLDMSEYMEKHTVSKLIGSPPGYVGYDDAGQLTEKVR 587

Query: 368 KCPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQ 427
           + P +V+L DE++KAHPDV  +LLQ+ ++GRLTD  GKT+  ++ I +MTSN  +N    
Sbjct: 588 RRPYSVILLDEIEKAHPDVFNMLLQILEDGRLTDSHGKTVNFENTIIIMTSNAGTN---- 643

Query: 428 HALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEI 487
                +  G  F+  T    +S+                V+ ++K  F R EFL RI+EI
Sbjct: 644 ----FKSGGIGFANNTYIALESR----------------VRDVIKETF-RPEFLNRIDEI 682

Query: 488 VYFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHE 547
           + F      EL  ++   L    ++A +K     V D   E IL  GYD  +GAR ++  
Sbjct: 683 IVFTELGTDELKKIIDLMLEEVYQEASEKDIRVNVSDKVKEFILEKGYDPKFGARPLRRT 742

Query: 548 VERQVVSQLAAAHEKSVIGKGSFVRLYVQWSKEV 581
           V+  +  +L+  + K  + +GS V + +  + EV
Sbjct: 743 VQNYIEDRLSEEYLKGTMKEGSLVGIDIDENNEV 776


>gi|386773998|ref|ZP_10096376.1| ATPase with chaperone activity, ATP-binding subunit
           [Brachybacterium paraconglomeratum LC44]
          Length = 880

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/309 (38%), Positives = 188/309 (60%), Gaps = 31/309 (10%)

Query: 250 REKEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGI 308
           R  + E  +   +EQ +  R++GQE A++ +S A++R   G +D + P   FLFLG +G+
Sbjct: 561 RLMQGETEKLLQMEQLIGKRLIGQERAVSEVSDAVRRARAGISDPNRPTGSFLFLGPTGV 620

Query: 309 GKTELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKK 368
           GKTELAK LA ++  D++ A IR+DMSEY EKH VA+L+GAPPGY+G+D+GGQLT+ +++
Sbjct: 621 GKTELAKALAEFLFDDER-AMIRIDMSEYSEKHTVARLVGAPPGYVGYDEGGQLTEAVRR 679

Query: 369 CPNAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQH 428
            P +VVL DE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ +  I ++TSNL +     H
Sbjct: 680 RPYSVVLLDEIEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRSTILILTSNLGA-----H 734

Query: 429 ALQLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIV 488
           ALQ                       D  ++   K   V  +++  F + EFL R+++IV
Sbjct: 735 ALQ-----------------------DAALTEQEKHDRVMQVVRASF-KPEFLNRLDDIV 770

Query: 489 YFLPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEV 548
            F   S+ +L ++V  ++   A++  ++     V +     +  +G+D  YGAR +K  V
Sbjct: 771 LFDALSREQLGSIVTLQIQEVAERLAERRIALQVDEAATRWLAEEGFDPMYGARPLKRLV 830

Query: 549 ERQVVSQLA 557
           ++++   LA
Sbjct: 831 QKEIGDGLA 839


>gi|206895288|ref|YP_002247181.1| negative regulator of genetic competence ClpC/mecB
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206737905|gb|ACI16983.1| negative regulator of genetic competence ClpC/mecB
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 826

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/318 (38%), Positives = 199/318 (62%), Gaps = 33/318 (10%)

Query: 252 KEAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGK 310
           +E+E+ +   LE+ L  R+VGQ+ AI+ ++ AI+R   G  D   P+  F+FLG +G+GK
Sbjct: 517 EESEKEKLAKLEEILHRRVVGQDEAISAVAQAIRRARTGLKDPKRPIGSFIFLGPTGVGK 576

Query: 311 TELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCP 370
           TELAK LA  +  D+  A +R DMSEY EKH V++LIG+PPGY+G+++GGQLT+ +++ P
Sbjct: 577 TELAKALAEVLFGDES-ALVRFDMSEYMEKHTVSRLIGSPPGYVGYEEGGQLTEAVRRRP 635

Query: 371 NAVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHAL 430
            +V+LFDE++KAHPD+  +LLQ+ D+GRLTD KG+ ++ K+ I +MTSNL S+ I  +A 
Sbjct: 636 YSVILFDEIEKAHPDIHNLLLQVLDDGRLTDAKGRIVDFKNTIIIMTSNLGSH-ILMNAA 694

Query: 431 QLRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
           Q  +  EE  K                         V  +LK +FR  EFL R+++IV+F
Sbjct: 695 QEGRPFEEAEKE------------------------VMDLLKSYFR-PEFLNRVDDIVFF 729

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVW-DIDVETILADGYDVHYGARSIKHEVE 549
            P +  E+  +   +L++ A++ L +  I + + D  +E +   G+D   GAR ++  ++
Sbjct: 730 KPLTMDEIKEIAKLQLSYVAQR-LSQQQIYVEFTDAAIENLAKVGFDPELGARPLRRAIQ 788

Query: 550 RQVVSQLAAAHEKSVIGK 567
           +++ +++A   EK V+G+
Sbjct: 789 KEIENRIA---EKMVLGE 803


>gi|90417179|ref|ZP_01225106.1| ClpB protein [gamma proteobacterium HTCC2207]
 gi|90330955|gb|EAS46216.1| ClpB protein [marine gamma proteobacterium HTCC2207]
          Length = 855

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/307 (40%), Positives = 188/307 (61%), Gaps = 31/307 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E  L  R++GQ  A+  +S A++R   G +D + P   FLFLG +G+GKT
Sbjct: 552 EGERDKLLRMEDSLHRRVMGQSEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 611

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 612 ELCKSLAEFLF-DSEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 670

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  +LLQ+ D+GRLTDG+G+T++ K+ + VMTSNL S+ I   A  
Sbjct: 671 SVLLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSDVIQMLA-- 728

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GEE              N DV  S       V  ++  HF R EF+ R++E+V F 
Sbjct: 729 ----GEE--------------NYDVMKS------AVMDVVSGHF-RPEFINRVDEVVVFH 763

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDV-ETILADGYDVHYGARSIKHEVER 550
           P +K +L  +   +L+   +K L +H + +    +V + +L  G+D  YGAR +K  +++
Sbjct: 764 PLTKDQLRGIASIQLDLL-RKRLAEHELQLSLSEEVLDKLLEAGFDPVYGARPLKRVIQQ 822

Query: 551 QVVSQLA 557
            V + LA
Sbjct: 823 LVENPLA 829


>gi|146307395|ref|YP_001187860.1| ATPase [Pseudomonas mendocina ymp]
 gi|145575596|gb|ABP85128.1| ATPase AAA-2 domain protein [Pseudomonas mendocina ymp]
          Length = 947

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/327 (38%), Positives = 198/327 (60%), Gaps = 31/327 (9%)

Query: 255 EERRKY-PLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKTE 312
           EER K   LEQRL +R+VGQ+ A+  ++ A++    G  +   P+  FLFLG +G+GKTE
Sbjct: 599 EEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTE 658

Query: 313 LAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPNA 372
           LAK LA  ++   + A +R+DMSEY E+H VA+L+GAPPGY+G+D+GGQLT+++++ P +
Sbjct: 659 LAKALAESVY-GSEGALLRIDMSEYGERHTVARLVGAPPGYVGYDEGGQLTEKVRRKPYS 717

Query: 373 VVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQL 432
           V+L DE++KAHPDV  +LLQ+FD+GRLTDGKG+ ++  + I + TSNL S+ I Q  L+ 
Sbjct: 718 VLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSD-IIQRRLKA 776

Query: 433 R-KEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           R   GEE+ K     +K++                V  +L+ HF R EFL RI+E++ F 
Sbjct: 777 RGAAGEEYEK-----TKAE----------------VMDVLRGHF-RPEFLNRIDELIVFH 814

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDID-VETILADGYDVHYGARSIKHEVER 550
              + E+  +V  +L+   + A  +  + + +D   V+    +GY   +GAR +K  +  
Sbjct: 815 ALGREEIRHIVGLQLDRVVRSAASQ-GVTLTFDGTLVDHFAEEGYKPEFGARELKRLIRS 873

Query: 551 QVVSQLAAAHEKSVIGKGSFVRLYVQW 577
           ++ + LA       IGKG     + +W
Sbjct: 874 ELETALAREMLGGGIGKGDHA--HARW 898


>gi|428219747|ref|YP_007104212.1| ATP-dependent chaperone ClpB [Pseudanabaena sp. PCC 7367]
 gi|427991529|gb|AFY71784.1| ATP-dependent chaperone ClpB [Pseudanabaena sp. PCC 7367]
          Length = 884

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 195/325 (60%), Gaps = 28/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E+E ++   LE  L +R++GQE A+  +SAAI+R   G  D + P+  FLFLG +G+GKT
Sbjct: 580 ESERQKLLKLESHLHERVIGQEEAVESVSAAIRRARAGMKDPNRPIGSFLFLGPTGVGKT 639

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELA+ LA ++  D ++A +RLDMSEY EKH V++LIGAPPGY+G+++GGQ ++ +++ P 
Sbjct: 640 ELARALAQFLF-DTEDAIVRLDMSEYMEKHSVSRLIGAPPGYVGYEEGGQFSEAVRRHPY 698

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
            VVLFDEV+KAHPDV  +LLQ+ D+GR+TD +G+ I+CK+ + +MTSN+ S+    H L+
Sbjct: 699 CVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRLIDCKNTVIIMTSNIGSD----HILE 754

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
           +  + + + +                        +V   L++ F R EFL RI++ + F 
Sbjct: 755 VAGDDDRYEEMQT---------------------LVMTALRKRF-RPEFLNRIDDTIIFH 792

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              KSE+ ++   ++     +  D+    ++    ++ I   GYD  +GAR ++  ++R+
Sbjct: 793 ALLKSEIRSIADLQIQRLESRLADQKISFVITPEALDYIALAGYDPVFGARPLRRAIQRE 852

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           + + +A    +     G  +++ V+
Sbjct: 853 IENPIATKILEGAFPPGHQIKIAVE 877


>gi|386856960|ref|YP_006261137.1| putative Chaperone clpB [Deinococcus gobiensis I-0]
 gi|380000489|gb|AFD25679.1| putative Chaperone clpB [Deinococcus gobiensis I-0]
          Length = 852

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/308 (39%), Positives = 191/308 (62%), Gaps = 32/308 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPL-VFLFLGSSGIGKT 311
           E E  +   LE++L  R++GQ+ AI  +S AI+R   G  D + PL  F+FLG +G+GKT
Sbjct: 543 EGEREKLLHLEEQLHARVIGQDRAIVSVSDAIRRARAGLNDPNRPLGSFMFLGPTGVGKT 602

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D  EA +RLDMSEY EKH VA+LIGAPPGY+G+++GGQLT+ +++ P 
Sbjct: 603 ELAKALAEYLF-DSSEAMVRLDMSEYMEKHTVARLIGAPPGYVGYEEGGQLTEAVRRRPY 661

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DE++KAHPDV  VLLQ+ D+GRLTDG+G+T++ ++ + ++TSN+ S  I    L+
Sbjct: 662 SVLLLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIILTSNIGSPLI----LE 717

Query: 432 LRKEGEEFSK-RTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYF 490
           ++  GE+ ++ R   + + QG         HF              R EFL R+++IV F
Sbjct: 718 MQARGEDAAEIREAVLGELQG---------HF--------------RPEFLNRVDDIVVF 754

Query: 491 LPFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILAD-GYDVHYGARSIKHEVE 549
              S ++L  +V  ++    ++ L +  + +      +  LA+ GYD  +GAR +K  + 
Sbjct: 755 DALSAADLRKIVDIQMGGL-RRRLTERRVTLHLSDGAKNKLAEIGYDPAFGARPLKRAIA 813

Query: 550 RQVVSQLA 557
           R++ + LA
Sbjct: 814 REIETPLA 821


>gi|121999011|ref|YP_001003798.1| ATPase [Halorhodospira halophila SL1]
 gi|121590416|gb|ABM62996.1| ATPase AAA-2 domain protein [Halorhodospira halophila SL1]
          Length = 870

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/325 (37%), Positives = 195/325 (60%), Gaps = 27/325 (8%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHP-LVFLFLGSSGIGKT 311
           E E  +   +E+ L +R+VGQ+ AI  ++ AI+R   G +D + P   FLFLG +G+GKT
Sbjct: 554 EGERDKLLRMEEALHERVVGQDEAIGAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKT 613

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           EL K LA ++  D +EA +R+DMSE+ EKH VA+LIGAPPGY+G+++GG LT+ +++ P 
Sbjct: 614 ELCKALAEFLF-DTQEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEHVRRKPY 672

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           +V+L DEV+KAH DV  VLLQ+ D+GRLTD  G+T++ ++ + VMTSNL S  I   A  
Sbjct: 673 SVILLDEVEKAHADVFNVLLQVLDDGRLTDSHGRTVDFRNTVIVMTSNLGSEVIQTMA-- 730

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
               GEE      S  + + S +D+ +   F              R EF+ RI+E+V F 
Sbjct: 731 ----GEE----EESYQRMKSSVMDI-VGTQF--------------RPEFINRIDEVVVFR 767

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
           P S+ ++  +   ++ + +++  ++     + ++ ++ I   G+D  YGAR +K  ++ +
Sbjct: 768 PLSREQIRAITSIQVRYLSERLAERDMALELSEVALDRIGEAGFDPVYGARPLKRVLQHE 827

Query: 552 VVSQLAAAHEKSVIGKGSFVRLYVQ 576
           V + LA    +   G+G  +R+ VQ
Sbjct: 828 VENPLAREMLQGNFGQGDRIRVDVQ 852


>gi|411120315|ref|ZP_11392691.1| ATP-dependent chaperone ClpB [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710471|gb|EKQ67982.1| ATP-dependent chaperone ClpB [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 873

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/319 (38%), Positives = 189/319 (59%), Gaps = 33/319 (10%)

Query: 253 EAEERRKYPLEQRLKDRIVGQESAINIISAAIKRKENGWTDDDHPLV-FLFLGSSGIGKT 311
           E+E ++   LE  L  R++GQ  A+  ++ AI+R   G  D + P+  F+FLG +G+GKT
Sbjct: 559 ESEMQKLLHLEDELHKRVIGQNEAVTAVADAIQRSRAGLADPNRPVASFIFLGPTGVGKT 618

Query: 312 ELAKQLAFYIHRDKKEAFIRLDMSEYQEKHEVAKLIGAPPGYLGHDDGGQLTKRLKKCPN 371
           ELAK LA Y+  D +EA +R+DMSEY EKH V++LIGAPPGY+G+D+GGQLT+ +++ P 
Sbjct: 619 ELAKALAAYLF-DTEEAMVRIDMSEYMEKHAVSRLIGAPPGYVGYDEGGQLTEAIRRRPY 677

Query: 372 AVVLFDEVDKAHPDVLTVLLQLFDEGRLTDGKGKTIECKDAIFVMTSNLASNEIAQHALQ 431
           AV+LFDE++KAHPDV  + LQ+ D+GR+TD +G T++ K+ I +MTSN+ S  I   A  
Sbjct: 678 AVILFDEIEKAHPDVFNIFLQILDDGRVTDAQGHTVDFKNTIIIMTSNIGSQFILDVA-- 735

Query: 432 LRKEGEEFSKRTPSISKSQGSNLDVTISRHFKDHVVQPILKRHFRRDEFLGRINEIVYFL 491
                               +  +V  SR      V   ++  F R EFL R++E + F 
Sbjct: 736 -----------------GDDTQYEVMRSR------VIDAMRAQF-RPEFLNRVDEFIIFH 771

Query: 492 PFSKSELHTLVCRELNFWAKKALDKHNINIVWDIDVETILADGYDVHYGARSIKHEVERQ 551
              KSEL  +V  +     ++  D+     + D  ++ +   GYD  YGAR +K  ++R+
Sbjct: 772 GLQKSELRNIVKLQTQRLEQRLGDRKMSLKLSDAAIDFLADVGYDPVYGARPLKRAIQRE 831

Query: 552 VVSQLAAAHEKSVIGKGSF 570
           + +Q+A    KS++ +G F
Sbjct: 832 LETQIA----KSIL-RGEF 845


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.136    0.392 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,342,375,576
Number of Sequences: 23463169
Number of extensions: 394422636
Number of successful extensions: 1534352
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16431
Number of HSP's successfully gapped in prelim test: 18829
Number of HSP's that attempted gapping in prelim test: 1327408
Number of HSP's gapped (non-prelim): 130206
length of query: 607
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 458
effective length of database: 8,863,183,186
effective search space: 4059337899188
effective search space used: 4059337899188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)