Diaphorina citri psyllid: psy13081

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
MRPIALKILYQGFNYHGFQIQTSSDNTIAHHLLKALQKTCLIEDKEKSSFACCGRTDSGVSAFCQVVTLKIRSKLTSPGEESDDNELPYLKMLNNNLPRDIKVVAWSPVPEKYSARFDCLFRNYKYWFPQAGLDIDAMHKAAQYLVGTHDFRNLCKMNVGNGVVNFRRLVTHAGVTSAWQNVQFNDSHHNICEFNIRSQGFLWHQIRCIMSVLFLVGQGNEKPEIIQQLVDIEKYPRKPVYPMVRGEPLNLYHTEFDNLTWHYDEIEVSHVLRDLHEDWSLLSIKATMLGEMIKDTVRESKCTMGDLDINHLIEGEFSRPGRILSETGEVRSRND
cccEEEEEEEcccccccccccccccccHHHHHHHHHHHccccccccCEEEEEcccccccccccccEEEEEEccccccccccccccHHHHHHHHHccccccEEEEEEECccccccccccccccEEEEEEccccccHHHHHHHHHHccccccccccccccccccccccEEEEEEEEEEEcccccccccccccEEEEEEEEccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccc
MRPIALKILYQGFNYHGFQIQTSSDNTIAHHLLKALQKTCLIEDKEKSSFACCGRTDSGVSAFCQVVTLKIRSKLTSPGEESDDNELPYLKMLNNNLPRDIKVVAWSPVPEKYSARFDCLFRNYKYWFPQAGLDIDAMHKAAQYLVGTHDFRNLCKMNVGNGVVNFRRLVTHAGVTSAWQNVQFNDSHHNICEFNIRSQGFLWHQIRCIMSVLFLVGQGNEKPEIIQQLVDIEKYPRKPVYPMVRGEPLNLYHTEFDNLTWHYDEIEVSHVLRDLHEDWSLLSIKATMLGEMIKDTVRESKCTMGDLDINHLIEGEF******************
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MRPIALKILYQGFNYHGFQIQTSSDNTIAHHLLKALQKTCLIEDKEKSSFACCGRTDSGVSAFCQVVTLKIRSKLTSPGEESDDNELPYLKMLNNNLPRDIKVVAWSPVPEKYSARFDCLFRNYKYWFPQAGLDIDAMHKAAQYLVGTHDFRNLCKMNVGNGVVNFRRLVTHAGVTSAWQNVQFNDSHHNICEFNIRSQGFLWHQIRCIMSVLFLVGQGNEKPEIIQQLVDIEKYPRKPVYPMVRGEPLNLYHTEFDNLTWHYDEIEVSHVLRDLHEDWSLLSIKATMLGEMIKDTVRESKCTMGDLDINHLIEGEFSRPGRILSETGEVRSRND

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
tRNA pseudouridine(38/39) synthase Formation of pseudouridine at position 39 in the anticodon stem and loop of transfer RNAs. Also acts on position 38, but much less efficiently.confidentQ9JI38
tRNA pseudouridine synthase A Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.confidentB8GFU5
tRNA pseudouridine synthase A Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.confidentA5ULI2

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031119 [BP]tRNA pseudouridine synthesisprobableGO:0009451, GO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:0001522, GO:1901360, GO:0034470, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0006400, GO:0008033, GO:0009987, GO:0006725, GO:0043412, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0044237, GO:0043170, GO:0006399, GO:0006396
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0009982 [MF]pseudouridine synthase activityprobableGO:0016866, GO:0003674, GO:0016853, GO:0003824

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1DJ0, chain A
Confidence level:very confident
Coverage over the Query: 1-178,189-263
View the alignment between query and template
View the model in PyMOL