Query psy13086
Match_columns 169
No_of_seqs 213 out of 1972
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 19:03:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13086.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13086hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ckk_A TRNA (guanine-N(7)-)-me 100.0 3.9E-32 1.3E-36 216.0 17.6 167 1-168 14-231 (235)
2 3dxy_A TRNA (guanine-N(7)-)-me 100.0 1.1E-31 3.9E-36 211.0 10.9 157 1-167 25-210 (218)
3 2fca_A TRNA (guanine-N(7)-)-me 100.0 5.5E-30 1.9E-34 200.0 10.8 155 2-167 30-213 (213)
4 2vdv_E TRNA (guanine-N(7)-)-me 100.0 6.6E-29 2.3E-33 197.3 10.0 167 1-168 30-236 (246)
5 1yzh_A TRNA (guanine-N(7)-)-me 99.9 5.1E-27 1.7E-31 182.3 14.1 153 2-165 33-214 (214)
6 4gek_A TRNA (CMO5U34)-methyltr 99.6 9E-16 3.1E-20 123.3 7.7 146 17-164 70-245 (261)
7 3p2e_A 16S rRNA methylase; met 99.6 5.3E-16 1.8E-20 122.0 5.2 84 18-104 25-139 (225)
8 3orh_A Guanidinoacetate N-meth 99.6 4E-15 1.4E-19 117.4 7.8 84 17-104 60-170 (236)
9 3dtn_A Putative methyltransfer 99.6 1.8E-14 6.1E-19 112.0 11.4 146 18-165 45-215 (234)
10 3e05_A Precorrin-6Y C5,15-meth 99.5 6.9E-14 2.4E-18 106.9 11.8 105 17-121 40-159 (204)
11 4hg2_A Methyltransferase type 99.5 9E-15 3.1E-19 117.4 5.7 76 18-104 40-135 (257)
12 3hm2_A Precorrin-6Y C5,15-meth 99.5 1.4E-13 4.7E-18 102.3 9.3 104 18-121 26-144 (178)
13 3mti_A RRNA methylase; SAM-dep 99.5 7.5E-14 2.6E-18 104.9 7.3 86 17-104 22-135 (185)
14 2p7i_A Hypothetical protein; p 99.5 3.1E-13 1.1E-17 104.8 10.3 135 18-161 43-196 (250)
15 3dli_A Methyltransferase; PSI- 99.5 4.2E-13 1.4E-17 105.0 10.6 122 18-163 42-183 (240)
16 1pjz_A Thiopurine S-methyltran 99.4 9.4E-14 3.2E-18 106.9 6.6 86 17-104 22-140 (203)
17 3ccf_A Cyclopropane-fatty-acyl 99.4 7.1E-13 2.4E-17 106.0 11.6 127 17-161 57-207 (279)
18 3mb5_A SAM-dependent methyltra 99.4 2.8E-13 9.5E-18 106.8 8.9 92 17-121 93-211 (255)
19 3njr_A Precorrin-6Y methylase; 99.4 8.1E-13 2.8E-17 101.9 11.0 102 17-121 55-171 (204)
20 4df3_A Fibrillarin-like rRNA/T 99.4 4.1E-13 1.4E-17 106.6 9.4 100 16-126 76-212 (233)
21 3kkz_A Uncharacterized protein 99.4 2.6E-13 8.9E-18 107.8 8.1 87 17-104 46-150 (267)
22 4htf_A S-adenosylmethionine-de 99.4 4E-13 1.4E-17 107.6 9.2 136 18-162 69-230 (285)
23 1zx0_A Guanidinoacetate N-meth 99.4 1.8E-13 6.2E-18 107.1 7.0 86 18-104 61-170 (236)
24 1nt2_A Fibrillarin-like PRE-rR 99.4 2.5E-13 8.5E-18 105.5 7.6 78 17-104 57-161 (210)
25 2p35_A Trans-aconitate 2-methy 99.4 1.9E-13 6.5E-18 107.4 6.9 80 18-105 34-133 (259)
26 3gu3_A Methyltransferase; alph 99.4 4.8E-13 1.6E-17 107.6 9.2 87 17-106 22-128 (284)
27 2vdw_A Vaccinia virus capping 99.4 2.4E-13 8.1E-18 111.3 7.5 93 18-110 49-175 (302)
28 3f4k_A Putative methyltransfer 99.4 3.9E-13 1.3E-17 105.6 8.4 87 17-104 46-150 (257)
29 1yb2_A Hypothetical protein TA 99.4 7.8E-13 2.7E-17 106.1 10.3 107 17-125 110-231 (275)
30 3jwh_A HEN1; methyltransferase 99.4 4.8E-13 1.6E-17 103.0 8.7 89 18-107 30-143 (217)
31 1vl5_A Unknown conserved prote 99.4 4.1E-13 1.4E-17 106.1 8.5 84 17-104 37-140 (260)
32 3jwg_A HEN1, methyltransferase 99.4 5.4E-13 1.9E-17 102.7 8.9 86 18-103 30-140 (219)
33 1nkv_A Hypothetical protein YJ 99.4 3.1E-13 1.1E-17 106.1 7.4 84 17-104 36-140 (256)
34 3tfw_A Putative O-methyltransf 99.4 2E-12 6.7E-17 102.5 12.0 99 17-126 63-206 (248)
35 3fpf_A Mtnas, putative unchara 99.4 7.4E-13 2.5E-17 108.5 9.6 89 16-104 121-222 (298)
36 3hnr_A Probable methyltransfer 99.4 1.5E-12 5.1E-17 100.0 10.5 127 18-159 46-196 (220)
37 3mgg_A Methyltransferase; NYSG 99.4 3.5E-13 1.2E-17 107.2 7.1 88 17-104 37-142 (276)
38 2aot_A HMT, histamine N-methyl 99.4 3.6E-13 1.2E-17 108.7 6.8 129 18-161 53-218 (292)
39 3eey_A Putative rRNA methylase 99.4 3.1E-13 1E-17 102.5 6.0 87 18-104 23-139 (197)
40 3ggd_A SAM-dependent methyltra 99.4 1.9E-12 6.4E-17 101.3 10.6 82 17-106 56-165 (245)
41 3mq2_A 16S rRNA methyltransfer 99.4 2.7E-13 9.3E-18 104.5 5.6 85 17-104 27-140 (218)
42 4dzr_A Protein-(glutamine-N5) 99.4 2.5E-13 8.6E-18 103.3 5.4 88 18-105 31-166 (215)
43 3g5l_A Putative S-adenosylmeth 99.4 6.3E-13 2.2E-17 104.5 7.8 88 18-108 45-149 (253)
44 2g72_A Phenylethanolamine N-me 99.4 3.2E-13 1.1E-17 108.6 6.1 39 18-56 72-114 (289)
45 2gs9_A Hypothetical protein TT 99.4 6.8E-13 2.3E-17 101.5 7.7 81 18-107 37-135 (211)
46 3g07_A 7SK snRNA methylphospha 99.4 3.8E-13 1.3E-17 109.0 6.6 41 17-57 46-91 (292)
47 3hem_A Cyclopropane-fatty-acyl 99.4 8.2E-13 2.8E-17 106.9 8.5 83 17-104 72-183 (302)
48 3duw_A OMT, O-methyltransferas 99.4 3.9E-12 1.3E-16 98.3 11.9 76 17-103 58-166 (223)
49 2gb4_A Thiopurine S-methyltran 99.4 6.4E-13 2.2E-17 106.1 7.7 86 17-104 68-191 (252)
50 3l8d_A Methyltransferase; stru 99.4 4.4E-12 1.5E-16 98.6 12.2 84 17-104 53-153 (242)
51 3h2b_A SAM-dependent methyltra 99.4 9E-13 3.1E-17 100.2 8.0 79 18-104 42-141 (203)
52 3dh0_A SAM dependent methyltra 99.4 4.9E-13 1.7E-17 102.7 6.6 86 17-104 37-143 (219)
53 3grz_A L11 mtase, ribosomal pr 99.4 3.5E-13 1.2E-17 102.9 5.6 108 17-126 60-180 (205)
54 3ocj_A Putative exported prote 99.4 7.6E-13 2.6E-17 107.4 7.8 87 17-104 118-227 (305)
55 3ujc_A Phosphoethanolamine N-m 99.4 5E-13 1.7E-17 105.0 6.4 87 17-104 55-159 (266)
56 3cc8_A Putative methyltransfer 99.4 4.2E-12 1.4E-16 97.4 11.1 137 18-163 33-184 (230)
57 3dlc_A Putative S-adenosyl-L-m 99.4 6.1E-13 2.1E-17 101.4 6.1 132 19-161 45-200 (219)
58 3bus_A REBM, methyltransferase 99.4 1.3E-12 4.4E-17 103.6 8.2 85 17-104 61-166 (273)
59 1p91_A Ribosomal RNA large sub 99.4 6.2E-13 2.1E-17 105.5 6.3 89 18-109 86-183 (269)
60 1xxl_A YCGJ protein; structura 99.4 1.5E-12 5.2E-17 101.9 8.5 84 17-104 21-124 (239)
61 2o57_A Putative sarcosine dime 99.4 4.3E-13 1.5E-17 107.9 5.3 85 17-104 82-187 (297)
62 2ex4_A Adrenal gland protein A 99.4 1.8E-12 6.1E-17 101.4 8.7 86 18-104 80-185 (241)
63 1xdz_A Methyltransferase GIDB; 99.4 2E-12 6.8E-17 101.6 8.8 87 18-104 71-174 (240)
64 2yqz_A Hypothetical protein TT 99.4 1.8E-12 6E-17 101.9 8.3 83 17-103 39-140 (263)
65 3ofk_A Nodulation protein S; N 99.4 9E-13 3.1E-17 101.1 6.5 88 18-107 52-157 (216)
66 3lcc_A Putative methyl chlorid 99.4 1.9E-12 6.4E-17 100.8 8.3 85 18-104 67-171 (235)
67 3g89_A Ribosomal RNA small sub 99.4 1.7E-12 5.8E-17 103.4 8.0 87 18-104 81-184 (249)
68 3e23_A Uncharacterized protein 99.3 1.2E-12 4.1E-17 100.2 6.8 79 18-104 44-141 (211)
69 1l3i_A Precorrin-6Y methyltran 99.3 7.3E-12 2.5E-16 93.3 10.8 103 17-121 33-151 (192)
70 3g5t_A Trans-aconitate 3-methy 99.3 1.6E-12 5.4E-17 105.0 7.7 83 18-103 37-148 (299)
71 3e8s_A Putative SAM dependent 99.3 3.2E-12 1.1E-16 97.8 9.0 79 18-107 53-155 (227)
72 3evz_A Methyltransferase; NYSG 99.3 3.1E-12 1.1E-16 99.1 9.0 104 17-121 55-197 (230)
73 1fbn_A MJ fibrillarin homologu 99.3 2E-12 6.7E-17 101.0 7.8 86 17-103 74-177 (230)
74 4dcm_A Ribosomal RNA large sub 99.3 2.5E-12 8.7E-17 108.2 9.0 98 18-118 223-349 (375)
75 1o54_A SAM-dependent O-methylt 99.3 3.2E-12 1.1E-16 102.4 9.1 94 18-125 113-233 (277)
76 2a14_A Indolethylamine N-methy 99.3 6.1E-13 2.1E-17 106.1 4.8 39 18-56 56-98 (263)
77 3u81_A Catechol O-methyltransf 99.3 2E-12 6.8E-17 100.3 7.6 108 18-126 59-192 (221)
78 2yxd_A Probable cobalt-precorr 99.3 1.7E-11 5.7E-16 90.9 12.3 104 17-125 35-151 (183)
79 3p9n_A Possible methyltransfer 99.3 4.1E-12 1.4E-16 96.0 9.0 81 18-105 45-154 (189)
80 1dus_A MJ0882; hypothetical pr 99.3 5.3E-12 1.8E-16 94.3 9.5 100 17-119 52-172 (194)
81 3vc1_A Geranyl diphosphate 2-C 99.3 1.6E-12 5.3E-17 105.9 7.0 87 17-104 117-221 (312)
82 1i9g_A Hypothetical protein RV 99.3 3.5E-12 1.2E-16 101.7 8.9 107 17-124 99-223 (280)
83 2kw5_A SLR1183 protein; struct 99.3 3.8E-12 1.3E-16 96.6 8.6 87 17-106 30-133 (202)
84 3pfg_A N-methyltransferase; N, 99.3 2.3E-12 7.7E-17 102.0 7.6 79 18-103 51-150 (263)
85 3sm3_A SAM-dependent methyltra 99.3 2.7E-12 9.3E-17 98.9 7.9 142 17-162 30-205 (235)
86 3i9f_A Putative type 11 methyl 99.3 2.7E-12 9.2E-17 95.0 7.4 78 17-104 17-112 (170)
87 3adn_A Spermidine synthase; am 99.3 4.7E-12 1.6E-16 103.4 9.5 83 18-104 84-198 (294)
88 1kpg_A CFA synthase;, cyclopro 99.3 3.6E-12 1.2E-16 102.0 8.6 87 17-105 64-169 (287)
89 2pwy_A TRNA (adenine-N(1)-)-me 99.3 5.6E-12 1.9E-16 99.0 9.6 107 17-125 96-218 (258)
90 2xvm_A Tellurite resistance pr 99.3 3.4E-12 1.2E-16 96.2 7.9 84 18-104 33-136 (199)
91 3ntv_A MW1564 protein; rossman 99.3 3.9E-12 1.3E-16 99.6 8.5 85 18-102 72-174 (232)
92 3bkw_A MLL3908 protein, S-aden 99.3 2.7E-12 9.4E-17 99.7 7.5 88 18-108 44-148 (243)
93 2p8j_A S-adenosylmethionine-de 99.3 1.1E-12 3.7E-17 99.9 5.0 87 18-104 24-128 (209)
94 3thr_A Glycine N-methyltransfe 99.3 8.9E-13 3E-17 105.7 4.7 91 18-110 58-181 (293)
95 1jsx_A Glucose-inhibited divis 99.3 2E-12 6.9E-17 98.5 6.5 88 18-105 66-166 (207)
96 2pxx_A Uncharacterized protein 99.3 1.7E-12 5.9E-17 98.8 6.0 91 17-108 42-163 (215)
97 2fk8_A Methoxy mycolic acid sy 99.3 4.6E-12 1.6E-16 103.0 8.8 86 17-104 90-194 (318)
98 3d2l_A SAM-dependent methyltra 99.3 4.9E-12 1.7E-16 98.2 8.6 83 18-108 34-141 (243)
99 1ve3_A Hypothetical protein PH 99.3 3.4E-12 1.2E-16 98.1 7.6 87 18-106 39-144 (227)
100 3lpm_A Putative methyltransfer 99.3 6.3E-12 2.1E-16 99.8 9.3 100 17-120 49-191 (259)
101 2b3t_A Protein methyltransfera 99.3 5.9E-12 2E-16 100.9 9.1 106 18-125 110-257 (276)
102 1wzn_A SAM-dependent methyltra 99.3 3.7E-12 1.3E-16 99.9 7.7 81 18-105 42-146 (252)
103 2yvl_A TRMI protein, hypotheti 99.3 9.9E-12 3.4E-16 97.0 10.1 104 17-125 91-209 (248)
104 3iv6_A Putative Zn-dependent a 99.3 4.7E-12 1.6E-16 102.0 8.2 87 17-106 45-150 (261)
105 3c3p_A Methyltransferase; NP_9 99.3 5.4E-12 1.9E-16 96.8 8.1 85 18-103 57-159 (210)
106 1xtp_A LMAJ004091AAA; SGPP, st 99.3 3.2E-12 1.1E-16 100.1 6.9 87 18-105 94-198 (254)
107 3g2m_A PCZA361.24; SAM-depende 99.3 3.6E-12 1.2E-16 102.9 7.2 90 18-109 83-195 (299)
108 3fzg_A 16S rRNA methylase; met 99.3 2.2E-12 7.5E-17 99.7 5.5 101 18-120 50-178 (200)
109 3bwc_A Spermidine synthase; SA 99.3 1.5E-11 5.3E-16 100.5 10.9 85 18-106 96-212 (304)
110 4fsd_A Arsenic methyltransfera 99.3 3E-12 1E-16 107.5 6.7 86 17-104 83-203 (383)
111 2avn_A Ubiquinone/menaquinone 99.3 2.4E-12 8.1E-17 102.0 5.7 87 18-108 55-156 (260)
112 3tr6_A O-methyltransferase; ce 99.3 5.8E-12 2E-16 97.3 7.7 87 18-104 65-174 (225)
113 2pt6_A Spermidine synthase; tr 99.3 1.5E-11 5.3E-16 101.4 10.7 99 18-120 117-250 (321)
114 1xj5_A Spermidine synthase 1; 99.3 1.3E-11 4.4E-16 102.5 10.2 85 18-106 121-237 (334)
115 3m70_A Tellurite resistance pr 99.3 5.7E-12 1.9E-16 100.9 7.8 80 17-104 120-223 (286)
116 1y8c_A S-adenosylmethionine-de 99.3 6.4E-12 2.2E-16 97.4 7.7 84 18-108 38-146 (246)
117 3ege_A Putative methyltransfer 99.3 3E-12 1E-16 101.6 5.9 86 17-105 34-131 (261)
118 3dr5_A Putative O-methyltransf 99.3 4.2E-12 1.4E-16 99.4 6.6 84 18-103 57-162 (221)
119 2pjd_A Ribosomal RNA small sub 99.3 3.5E-12 1.2E-16 105.6 6.5 98 18-118 197-318 (343)
120 1inl_A Spermidine synthase; be 99.3 1.9E-11 6.7E-16 99.6 10.8 86 18-106 91-207 (296)
121 2qe6_A Uncharacterized protein 99.3 1.3E-11 4.4E-16 99.5 9.6 88 18-105 78-197 (274)
122 2frn_A Hypothetical protein PH 99.3 4.3E-12 1.5E-16 102.3 6.7 76 18-106 126-227 (278)
123 2ipx_A RRNA 2'-O-methyltransfe 99.3 5.9E-12 2E-16 98.2 7.2 79 17-105 77-183 (233)
124 2esr_A Methyltransferase; stru 99.3 4.5E-12 1.5E-16 94.4 6.2 79 18-106 32-140 (177)
125 2i7c_A Spermidine synthase; tr 99.3 2.3E-11 7.9E-16 98.5 10.5 84 18-105 79-193 (283)
126 3tma_A Methyltransferase; thum 99.3 1.4E-11 4.7E-16 102.3 9.3 91 18-111 204-324 (354)
127 1ri5_A MRNA capping enzyme; me 99.3 3.2E-12 1.1E-16 102.2 4.8 91 17-108 64-178 (298)
128 1iy9_A Spermidine synthase; ro 99.3 3.9E-11 1.3E-15 96.8 11.1 99 18-120 76-209 (275)
129 3ou2_A SAM-dependent methyltra 99.3 6.3E-12 2.1E-16 96.0 6.1 136 18-159 47-200 (218)
130 1g8a_A Fibrillarin-like PRE-rR 99.2 1E-11 3.6E-16 96.2 7.1 88 17-104 73-178 (227)
131 3opn_A Putative hemolysin; str 99.2 4.1E-12 1.4E-16 100.3 4.7 82 18-104 38-137 (232)
132 2nxc_A L11 mtase, ribosomal pr 99.2 1E-11 3.5E-16 98.8 7.0 106 17-126 120-239 (254)
133 1ws6_A Methyltransferase; stru 99.2 1E-11 3.6E-16 91.3 6.3 78 17-106 41-149 (171)
134 1uir_A Polyamine aminopropyltr 99.2 4.1E-11 1.4E-15 98.4 10.6 86 18-104 78-195 (314)
135 3dmg_A Probable ribosomal RNA 99.2 2.7E-11 9.1E-16 102.3 9.6 93 18-118 234-355 (381)
136 3gjy_A Spermidine synthase; AP 99.2 1.5E-11 5.1E-16 101.6 7.8 82 19-104 91-200 (317)
137 3cgg_A SAM-dependent methyltra 99.2 2.1E-11 7.1E-16 91.0 7.9 83 17-106 46-149 (195)
138 3bxo_A N,N-dimethyltransferase 99.2 8.5E-12 2.9E-16 96.6 5.8 80 18-104 41-141 (239)
139 2gpy_A O-methyltransferase; st 99.2 1.3E-11 4.4E-16 96.1 6.8 86 18-103 55-159 (233)
140 1mjf_A Spermidine synthase; sp 99.2 3.3E-11 1.1E-15 97.4 9.3 82 18-104 76-193 (281)
141 2o07_A Spermidine synthase; st 99.2 5.7E-11 2E-15 97.3 10.8 83 18-104 96-209 (304)
142 3m33_A Uncharacterized protein 99.2 3.6E-12 1.2E-16 99.1 3.4 83 17-103 48-141 (226)
143 2ozv_A Hypothetical protein AT 99.2 2.5E-11 8.7E-16 96.8 8.4 99 18-119 37-184 (260)
144 3bgv_A MRNA CAP guanine-N7 met 99.2 1.8E-11 6E-16 99.5 7.4 90 18-108 35-159 (313)
145 3uwp_A Histone-lysine N-methyl 99.2 2.9E-11 9.8E-16 103.2 8.7 85 17-103 173-287 (438)
146 2b25_A Hypothetical protein; s 99.2 3.4E-11 1.2E-15 99.0 9.0 102 17-119 105-234 (336)
147 2i62_A Nicotinamide N-methyltr 99.2 1.5E-11 5.2E-16 96.6 5.9 39 18-57 57-100 (265)
148 3a27_A TYW2, uncharacterized p 99.2 2.1E-11 7.3E-16 98.0 6.9 89 17-105 119-220 (272)
149 3dp7_A SAM-dependent methyltra 99.2 5.3E-11 1.8E-15 99.1 9.2 86 18-104 180-287 (363)
150 2b2c_A Spermidine synthase; be 99.2 4.6E-11 1.6E-15 98.4 8.7 83 18-104 109-222 (314)
151 4e2x_A TCAB9; kijanose, tetron 99.2 2.4E-11 8.1E-16 102.5 7.0 80 17-106 107-210 (416)
152 2fhp_A Methylase, putative; al 99.2 2.2E-11 7.5E-16 90.9 6.0 80 17-106 44-156 (187)
153 3lbf_A Protein-L-isoaspartate 99.2 1.9E-11 6.4E-16 93.4 5.7 86 17-106 77-176 (210)
154 1nv8_A HEMK protein; class I a 99.2 6.3E-11 2.2E-15 96.0 9.1 86 18-106 124-251 (284)
155 1sui_A Caffeoyl-COA O-methyltr 99.2 4.3E-11 1.5E-15 94.9 7.8 84 18-103 80-189 (247)
156 3r3h_A O-methyltransferase, SA 99.2 6E-12 2.1E-16 99.6 2.7 75 18-103 61-169 (242)
157 2ift_A Putative methylase HI07 99.2 3.3E-11 1.1E-15 92.4 6.4 89 18-107 54-166 (201)
158 3hp7_A Hemolysin, putative; st 99.2 1.6E-11 5.6E-16 100.3 4.8 74 18-103 86-184 (291)
159 2yxe_A Protein-L-isoaspartate 99.2 4E-11 1.4E-15 91.9 6.7 89 17-107 77-180 (215)
160 1ixk_A Methyltransferase; open 99.2 9.7E-11 3.3E-15 96.1 9.3 88 17-104 118-246 (315)
161 3i53_A O-methyltransferase; CO 99.2 6.2E-11 2.1E-15 97.2 8.1 126 18-161 170-318 (332)
162 3q87_B N6 adenine specific DNA 99.2 9.7E-11 3.3E-15 87.5 8.3 102 18-125 24-143 (170)
163 3ajd_A Putative methyltransfer 99.2 1.1E-10 3.7E-15 93.8 9.1 111 17-127 83-237 (274)
164 3htx_A HEN1; HEN1, small RNA m 99.2 1.5E-10 5E-15 105.9 10.8 94 17-111 721-841 (950)
165 2r3s_A Uncharacterized protein 99.2 4.1E-11 1.4E-15 97.8 6.5 86 18-104 166-271 (335)
166 1vlm_A SAM-dependent methyltra 99.1 3.3E-10 1.1E-14 87.3 10.9 79 18-106 48-141 (219)
167 1qzz_A RDMB, aclacinomycin-10- 99.1 6.8E-11 2.3E-15 98.1 7.4 87 18-105 183-288 (374)
168 3q7e_A Protein arginine N-meth 99.1 5.7E-11 2E-15 98.7 7.0 84 17-102 66-171 (349)
169 1i1n_A Protein-L-isoaspartate 99.1 2.9E-11 1E-15 93.5 4.8 87 17-105 77-183 (226)
170 3cbg_A O-methyltransferase; cy 99.1 9.5E-11 3.3E-15 91.7 7.8 84 18-103 73-181 (232)
171 3gwz_A MMCR; methyltransferase 99.1 1.2E-10 4.2E-15 97.1 8.8 86 18-104 203-307 (369)
172 3bkx_A SAM-dependent methyltra 99.1 3.3E-11 1.1E-15 95.5 5.1 86 17-104 43-159 (275)
173 2avd_A Catechol-O-methyltransf 99.1 1.2E-10 4E-15 90.1 7.8 86 18-103 70-178 (229)
174 1x19_A CRTF-related protein; m 99.1 1.1E-10 3.9E-15 96.6 8.2 130 18-161 191-345 (359)
175 1jg1_A PIMT;, protein-L-isoasp 99.1 5E-11 1.7E-15 93.1 5.4 89 17-108 91-193 (235)
176 2fpo_A Methylase YHHF; structu 99.1 9.7E-11 3.3E-15 89.9 6.9 79 18-106 55-162 (202)
177 3id6_C Fibrillarin-like rRNA/T 99.1 1.4E-10 4.7E-15 91.9 7.8 76 17-103 76-180 (232)
178 3c3y_A Pfomt, O-methyltransfer 99.1 1.1E-10 3.8E-15 91.8 7.1 85 18-104 71-181 (237)
179 1vbf_A 231AA long hypothetical 99.1 7.8E-11 2.7E-15 91.2 6.0 87 17-107 70-168 (231)
180 2hnk_A SAM-dependent O-methylt 99.1 1.1E-10 3.7E-15 91.4 6.9 87 18-104 61-181 (239)
181 1u2z_A Histone-lysine N-methyl 99.1 1.5E-10 5.1E-15 99.3 8.2 87 17-103 242-358 (433)
182 1sqg_A SUN protein, FMU protei 99.1 2.4E-10 8.2E-15 97.4 9.3 111 17-127 246-400 (429)
183 1dl5_A Protein-L-isoaspartate 99.1 1.1E-10 3.8E-15 95.5 7.0 88 17-106 75-177 (317)
184 2ip2_A Probable phenazine-spec 99.1 1.2E-10 4.2E-15 95.3 7.2 85 19-104 169-272 (334)
185 3mcz_A O-methyltransferase; ad 99.1 1E-10 3.6E-15 96.3 6.6 86 18-104 180-287 (352)
186 3m6w_A RRNA methylase; rRNA me 99.1 3.6E-10 1.2E-14 97.6 10.2 112 17-128 101-256 (464)
187 2bm8_A Cephalosporin hydroxyla 99.1 4.7E-11 1.6E-15 94.1 4.0 98 18-126 82-214 (236)
188 1tw3_A COMT, carminomycin 4-O- 99.1 1.5E-10 5.2E-15 95.6 7.2 88 18-106 184-290 (360)
189 3giw_A Protein of unknown func 99.1 1.7E-10 5.9E-15 93.6 7.2 87 18-104 79-200 (277)
190 2plw_A Ribosomal RNA methyltra 99.1 1.7E-10 5.9E-15 87.3 6.6 30 18-47 23-59 (201)
191 1o9g_A RRNA methyltransferase; 99.1 9.8E-11 3.4E-15 92.2 5.1 40 18-57 52-98 (250)
192 3gdh_A Trimethylguanosine synt 99.1 1.1E-11 3.8E-16 96.7 -0.6 76 17-102 78-179 (241)
193 2yxl_A PH0851 protein, 450AA l 99.1 5.6E-10 1.9E-14 95.8 9.7 111 17-127 259-415 (450)
194 2cmg_A Spermidine synthase; tr 99.1 1.7E-10 5.7E-15 92.7 5.8 73 18-105 73-172 (262)
195 1af7_A Chemotaxis receptor met 99.0 8.2E-11 2.8E-15 95.3 3.9 39 18-56 106-157 (274)
196 3r0q_C Probable protein argini 99.0 1.9E-10 6.5E-15 96.5 6.2 80 17-103 63-168 (376)
197 2h00_A Methyltransferase 10 do 99.0 1.6E-11 5.6E-16 96.7 -0.6 40 18-57 66-110 (254)
198 2fyt_A Protein arginine N-meth 99.0 3E-10 1E-14 94.1 7.0 83 17-101 64-168 (340)
199 3dou_A Ribosomal RNA large sub 99.0 8.1E-10 2.8E-14 84.4 8.7 105 18-126 26-159 (191)
200 2pbf_A Protein-L-isoaspartate 99.0 2.7E-10 9.3E-15 88.0 6.1 87 17-105 80-194 (227)
201 1ej0_A FTSJ; methyltransferase 99.0 1.4E-10 4.8E-15 84.8 3.9 101 18-119 23-151 (180)
202 1wy7_A Hypothetical protein PH 99.0 4.1E-09 1.4E-13 80.1 11.9 99 17-125 49-169 (207)
203 3reo_A (ISO)eugenol O-methyltr 99.0 2.3E-10 7.8E-15 95.6 5.3 131 18-162 204-353 (368)
204 3kr9_A SAM-dependent methyltra 99.0 7.9E-10 2.7E-14 87.2 7.8 102 18-121 16-134 (225)
205 1r18_A Protein-L-isoaspartate( 99.0 1.9E-10 6.5E-15 89.2 4.2 87 17-105 84-195 (227)
206 1g6q_1 HnRNP arginine N-methyl 99.0 5.5E-10 1.9E-14 92.0 7.0 83 18-102 39-143 (328)
207 4a6d_A Hydroxyindole O-methylt 99.0 4.6E-09 1.6E-13 87.3 12.1 126 18-161 180-331 (353)
208 2y1w_A Histone-arginine methyl 99.0 3.9E-10 1.3E-14 93.6 5.6 86 17-103 50-154 (348)
209 3m4x_A NOL1/NOP2/SUN family pr 99.0 1.3E-09 4.5E-14 94.0 8.8 110 17-127 105-259 (456)
210 3lcv_B Sisomicin-gentamicin re 99.0 2.6E-09 9E-14 86.2 9.9 102 18-121 133-263 (281)
211 2frx_A Hypothetical protein YE 99.0 1.9E-09 6.5E-14 93.5 9.7 88 17-104 117-246 (479)
212 2igt_A SAM dependent methyltra 99.0 1.5E-09 5.2E-14 89.8 8.5 81 18-104 154-272 (332)
213 2nyu_A Putative ribosomal RNA 99.0 1.2E-09 4.2E-14 82.1 7.0 87 18-106 23-147 (196)
214 3lec_A NADB-rossmann superfami 99.0 2.4E-09 8.2E-14 84.7 8.7 102 18-121 22-140 (230)
215 2zfu_A Nucleomethylin, cerebra 98.9 7.8E-10 2.7E-14 84.6 5.7 97 18-125 68-173 (215)
216 3p9c_A Caffeic acid O-methyltr 98.9 5.4E-10 1.9E-14 93.2 5.1 127 18-163 202-352 (364)
217 3gnl_A Uncharacterized protein 98.9 1.9E-09 6.5E-14 86.0 8.0 98 18-115 22-138 (244)
218 3tm4_A TRNA (guanine N2-)-meth 98.9 2.9E-09 1E-13 89.2 9.5 40 18-57 218-262 (373)
219 3lst_A CALO1 methyltransferase 98.9 8.5E-10 2.9E-14 91.1 5.6 126 18-162 185-334 (348)
220 3bzb_A Uncharacterized protein 98.9 4.7E-09 1.6E-13 84.5 9.5 84 18-104 80-205 (281)
221 4dmg_A Putative uncharacterize 98.9 1.9E-09 6.5E-14 91.3 7.4 84 18-105 215-327 (393)
222 1fp2_A Isoflavone O-methyltran 98.9 7.1E-10 2.4E-14 91.7 4.6 84 18-104 189-288 (352)
223 1fp1_D Isoliquiritigenin 2'-O- 98.9 5.1E-10 1.7E-14 93.3 3.7 84 18-104 210-306 (372)
224 2yx1_A Hypothetical protein MJ 98.9 1.8E-09 6.1E-14 89.3 6.7 76 17-105 195-292 (336)
225 1ne2_A Hypothetical protein TA 98.9 8.3E-09 2.8E-13 78.2 9.3 92 18-120 52-161 (200)
226 2b78_A Hypothetical protein SM 98.9 4.4E-09 1.5E-13 88.6 8.4 87 18-107 213-334 (385)
227 3k6r_A Putative transferase PH 98.9 1.4E-09 4.9E-14 88.2 5.0 75 17-103 125-224 (278)
228 4hc4_A Protein arginine N-meth 98.9 2.4E-09 8.1E-14 90.3 6.1 84 17-102 83-187 (376)
229 2as0_A Hypothetical protein PH 98.9 4.7E-09 1.6E-13 88.3 7.5 87 17-106 217-337 (396)
230 1wxx_A TT1595, hypothetical pr 98.8 2.7E-09 9.2E-14 89.5 5.9 85 18-106 210-327 (382)
231 3sso_A Methyltransferase; macr 98.8 7.3E-10 2.5E-14 94.3 2.4 77 18-104 217-324 (419)
232 3b3j_A Histone-arginine methyl 98.8 9.6E-10 3.3E-14 95.3 3.0 84 18-102 159-261 (480)
233 2wa2_A Non-structural protein 98.8 6.7E-10 2.3E-14 89.9 1.5 82 18-105 83-194 (276)
234 2jjq_A Uncharacterized RNA met 98.8 1.9E-08 6.6E-13 85.9 10.0 92 18-113 291-396 (425)
235 3frh_A 16S rRNA methylase; met 98.8 1E-08 3.5E-13 81.8 7.6 84 18-103 106-205 (253)
236 2qm3_A Predicted methyltransfe 98.8 1.5E-08 5E-13 84.8 8.9 85 18-105 173-279 (373)
237 2oxt_A Nucleoside-2'-O-methylt 98.8 1.2E-09 4.2E-14 87.8 2.0 83 18-106 75-187 (265)
238 2ld4_A Anamorsin; methyltransf 98.8 4E-09 1.4E-13 78.4 4.3 77 15-104 10-101 (176)
239 4azs_A Methyltransferase WBDD; 98.8 5.1E-09 1.8E-13 92.2 5.6 86 17-104 66-173 (569)
240 3v97_A Ribosomal RNA large sub 98.8 1.2E-08 4E-13 92.2 7.8 85 17-106 539-659 (703)
241 1zq9_A Probable dimethyladenos 98.8 7E-09 2.4E-13 83.9 5.7 39 17-57 28-71 (285)
242 3c0k_A UPF0064 protein YCCW; P 98.7 2.3E-08 7.8E-13 84.2 8.3 86 18-106 221-341 (396)
243 1zg3_A Isoflavanone 4'-O-methy 98.7 4.5E-09 1.6E-13 87.0 3.8 84 18-104 194-293 (358)
244 2qfm_A Spermine synthase; sper 98.7 4E-08 1.4E-12 82.4 9.0 84 18-105 189-315 (364)
245 2f8l_A Hypothetical protein LM 98.7 6.2E-09 2.1E-13 86.0 3.9 87 18-104 131-256 (344)
246 2p41_A Type II methyltransfera 98.7 9.7E-09 3.3E-13 84.1 4.9 82 18-105 83-192 (305)
247 1uwv_A 23S rRNA (uracil-5-)-me 98.7 1.1E-07 3.9E-12 81.0 11.1 103 18-125 287-408 (433)
248 2ih2_A Modification methylase 98.7 4.9E-09 1.7E-13 88.0 2.0 100 18-120 40-184 (421)
249 2dul_A N(2),N(2)-dimethylguano 98.6 4.7E-08 1.6E-12 82.3 6.4 87 18-104 48-164 (378)
250 2h1r_A Dimethyladenosine trans 98.6 8.8E-08 3E-12 77.9 7.7 38 17-56 42-84 (299)
251 2xyq_A Putative 2'-O-methyl tr 98.5 1.2E-08 4.2E-13 83.1 0.4 101 17-120 63-187 (290)
252 2b9e_A NOL1/NOP2/SUN domain fa 98.5 5.6E-07 1.9E-11 73.8 9.9 41 17-57 102-148 (309)
253 3bt7_A TRNA (uracil-5-)-methyl 98.5 2.5E-07 8.4E-12 77.3 7.9 38 18-57 214-256 (369)
254 3ldu_A Putative methylase; str 98.4 7.2E-07 2.5E-11 75.1 8.1 71 37-111 258-351 (385)
255 3k0b_A Predicted N6-adenine-sp 98.4 7.5E-07 2.6E-11 75.3 8.1 71 37-111 264-357 (393)
256 3ldg_A Putative uncharacterize 98.4 1.3E-06 4.4E-11 73.7 9.0 71 37-111 257-350 (384)
257 2okc_A Type I restriction enzy 98.3 2.4E-07 8.3E-12 79.1 4.0 86 18-106 172-309 (445)
258 3o4f_A Spermidine synthase; am 98.3 1.5E-06 5.2E-11 70.9 8.5 83 18-104 84-198 (294)
259 1m6y_A S-adenosyl-methyltransf 98.3 3.3E-07 1.1E-11 74.9 4.1 40 18-57 27-71 (301)
260 3tqs_A Ribosomal RNA small sub 98.3 6.5E-07 2.2E-11 71.5 5.6 39 17-57 29-72 (255)
261 2qy6_A UPF0209 protein YFCK; s 98.3 9.3E-07 3.2E-11 70.7 6.1 25 80-104 189-213 (257)
262 1qam_A ERMC' methyltransferase 98.3 5.6E-07 1.9E-11 71.0 4.3 39 17-57 30-73 (244)
263 3uzu_A Ribosomal RNA small sub 98.3 4.5E-07 1.6E-11 73.3 3.6 39 17-55 42-87 (279)
264 3axs_A Probable N(2),N(2)-dime 98.2 1.2E-06 4.2E-11 74.1 5.7 88 18-105 53-159 (392)
265 3gru_A Dimethyladenosine trans 98.2 1.3E-06 4.4E-11 71.2 5.2 39 17-57 50-93 (295)
266 3ftd_A Dimethyladenosine trans 98.2 6.7E-07 2.3E-11 71.1 3.4 38 17-55 31-73 (249)
267 3fut_A Dimethyladenosine trans 98.2 1.1E-06 3.7E-11 70.9 3.9 38 17-57 47-89 (271)
268 3evf_A RNA-directed RNA polyme 98.1 2.6E-06 8.8E-11 68.8 4.4 87 18-106 75-186 (277)
269 1qyr_A KSGA, high level kasuga 98.0 1.9E-06 6.5E-11 68.6 2.7 40 18-57 22-64 (252)
270 3c6k_A Spermine synthase; sper 98.0 1.7E-05 5.7E-10 66.8 8.1 88 18-105 206-332 (381)
271 2r6z_A UPF0341 protein in RSP 97.9 3.8E-06 1.3E-10 67.1 3.0 36 18-55 84-131 (258)
272 1m6e_X S-adenosyl-L-methionnin 97.9 0.00027 9.3E-09 59.0 14.0 139 18-162 52-278 (359)
273 3s1s_A Restriction endonucleas 97.9 4.1E-05 1.4E-09 70.1 9.6 102 18-122 322-489 (878)
274 1yub_A Ermam, rRNA methyltrans 97.9 3.7E-07 1.3E-11 71.8 -3.5 38 17-56 29-71 (245)
275 3ll7_A Putative methyltransfer 97.9 1.1E-05 3.7E-10 68.7 5.0 38 18-57 94-136 (410)
276 3v97_A Ribosomal RNA large sub 97.9 4.1E-05 1.4E-09 69.1 8.8 22 36-57 256-277 (703)
277 2ar0_A M.ecoki, type I restric 97.8 2.2E-05 7.7E-10 68.8 6.5 86 18-106 170-314 (541)
278 2efj_A 3,7-dimethylxanthine me 97.8 0.00015 5.2E-09 61.1 11.3 73 86-162 207-290 (384)
279 3b5i_A S-adenosyl-L-methionine 97.8 4.6E-05 1.6E-09 64.0 7.9 21 84-104 205-225 (374)
280 2zig_A TTHA0409, putative modi 97.7 1.3E-05 4.4E-10 64.9 3.1 41 17-57 235-278 (297)
281 4fzv_A Putative methyltransfer 97.7 9.6E-05 3.3E-09 61.8 8.5 88 17-104 148-284 (359)
282 3gcz_A Polyprotein; flavivirus 97.7 1.3E-05 4.3E-10 64.9 2.8 86 18-106 91-203 (282)
283 3cvo_A Methyltransferase-like 97.7 0.00016 5.5E-09 55.8 8.3 49 18-67 31-86 (202)
284 3lkd_A Type I restriction-modi 97.6 0.00036 1.2E-08 61.2 10.6 104 18-121 222-380 (542)
285 3khk_A Type I restriction-modi 97.6 4.2E-05 1.4E-09 67.1 4.2 100 19-121 246-418 (544)
286 3eld_A Methyltransferase; flav 97.5 0.0001 3.6E-09 60.0 4.8 87 17-106 81-193 (300)
287 2oyr_A UPF0341 protein YHIQ; a 97.4 9.2E-05 3.1E-09 59.1 3.6 32 19-52 90-126 (258)
288 3ua3_A Protein arginine N-meth 97.3 8.7E-05 3E-09 67.0 2.6 38 18-55 410-465 (745)
289 4gqb_A Protein arginine N-meth 97.3 0.00021 7.1E-09 63.9 4.8 38 18-56 358-404 (637)
290 1g60_A Adenine-specific methyl 97.0 0.00045 1.5E-08 54.6 3.4 42 16-57 211-255 (260)
291 2wk1_A NOVP; transferase, O-me 96.8 0.0013 4.5E-08 53.1 5.2 28 18-45 107-144 (282)
292 1wg8_A Predicted S-adenosylmet 96.8 0.00081 2.8E-08 54.5 3.8 35 18-54 23-62 (285)
293 2k4m_A TR8_protein, UPF0146 pr 96.8 0.0002 6.7E-09 52.8 -0.0 53 18-70 36-100 (153)
294 3vyw_A MNMC2; tRNA wobble urid 96.4 0.0088 3E-07 48.9 7.2 22 81-102 203-224 (308)
295 3lkz_A Non-structural protein 96.2 0.0039 1.4E-07 50.8 4.3 86 18-107 95-207 (321)
296 3ufb_A Type I restriction-modi 95.7 0.063 2.2E-06 46.7 9.7 38 18-55 218-273 (530)
297 2px2_A Genome polyprotein [con 95.0 0.055 1.9E-06 43.2 6.6 22 86-107 164-186 (269)
298 3ps9_A TRNA 5-methylaminomethy 94.8 0.08 2.7E-06 46.9 7.8 24 81-104 196-219 (676)
299 2py6_A Methyltransferase FKBM; 94.5 0.034 1.2E-06 46.8 4.5 41 17-57 226-273 (409)
300 3iht_A S-adenosyl-L-methionine 94.5 0.074 2.5E-06 39.5 5.5 79 19-101 42-144 (174)
301 3tka_A Ribosomal RNA small sub 94.4 0.044 1.5E-06 45.4 4.7 36 18-53 58-99 (347)
302 1i4w_A Mitochondrial replicati 94.4 0.029 1E-06 46.6 3.7 39 18-56 59-102 (353)
303 3r24_A NSP16, 2'-O-methyl tran 94.3 0.058 2E-06 44.1 5.0 87 18-105 110-218 (344)
304 1boo_A Protein (N-4 cytosine-s 94.1 0.027 9.3E-07 45.8 2.9 42 16-57 251-295 (323)
305 3p8z_A Mtase, non-structural p 93.3 0.036 1.2E-06 44.0 2.2 30 18-47 79-113 (267)
306 3pvc_A TRNA 5-methylaminomethy 93.0 0.15 5E-06 45.4 5.9 23 82-104 189-211 (689)
307 4auk_A Ribosomal RNA large sub 92.5 0.059 2E-06 45.1 2.5 28 17-46 211-243 (375)
308 1f8f_A Benzyl alcohol dehydrog 92.2 0.22 7.4E-06 40.7 5.6 82 17-103 190-288 (371)
309 1eg2_A Modification methylase 91.8 0.069 2.4E-06 43.5 2.1 42 16-57 241-288 (319)
310 3s2e_A Zinc-containing alcohol 90.4 0.53 1.8E-05 37.8 6.2 82 17-103 166-262 (340)
311 3fpc_A NADP-dependent alcohol 90.4 0.62 2.1E-05 37.6 6.6 73 16-103 165-265 (352)
312 2c7p_A Modification methylase 89.5 0.62 2.1E-05 37.9 5.8 57 17-73 10-85 (327)
313 1pl8_A Human sorbitol dehydrog 89.2 1.3 4.4E-05 35.8 7.6 82 17-103 171-272 (356)
314 4eez_A Alcohol dehydrogenase 1 89.1 0.77 2.6E-05 36.8 6.1 83 17-103 163-262 (348)
315 1g55_A DNA cytosine methyltran 88.3 0.47 1.6E-05 38.8 4.3 40 18-57 2-47 (343)
316 3jv7_A ADH-A; dehydrogenase, n 88.1 0.74 2.5E-05 37.0 5.4 83 17-103 171-269 (345)
317 3fwz_A Inner membrane protein 87.7 4.5 0.00015 27.9 8.8 83 18-111 7-112 (140)
318 1pqw_A Polyketide synthase; ro 87.0 0.65 2.2E-05 34.1 4.1 83 17-104 38-137 (198)
319 2vz8_A Fatty acid synthase; tr 86.9 0.25 8.6E-06 50.4 2.2 84 18-104 1241-1348(2512)
320 3m6i_A L-arabinitol 4-dehydrog 86.9 2.3 7.8E-05 34.3 7.7 83 17-103 179-282 (363)
321 1jvb_A NAD(H)-dependent alcoho 86.0 0.73 2.5E-05 37.1 4.2 83 17-103 170-270 (347)
322 1uuf_A YAHK, zinc-type alcohol 83.8 1.2 3.9E-05 36.5 4.5 83 17-104 194-288 (369)
323 4b7c_A Probable oxidoreductase 83.7 1.9 6.5E-05 34.3 5.7 85 16-104 148-248 (336)
324 3gms_A Putative NADPH:quinone 83.5 1.1 3.8E-05 35.9 4.2 38 16-54 143-187 (340)
325 4a2c_A Galactitol-1-phosphate 83.4 3.7 0.00013 32.7 7.3 84 17-104 160-260 (346)
326 2h6e_A ADH-4, D-arabinose 1-de 83.2 2.5 8.6E-05 33.8 6.2 81 17-103 170-268 (344)
327 1cdo_A Alcohol dehydrogenase; 81.9 3.8 0.00013 33.2 6.9 82 17-103 192-293 (374)
328 1v3u_A Leukotriene B4 12- hydr 81.9 2.8 9.5E-05 33.3 6.0 83 16-103 144-243 (333)
329 4ej6_A Putative zinc-binding d 81.5 3 0.0001 33.9 6.2 85 16-104 181-284 (370)
330 2jhf_A Alcohol dehydrogenase E 79.6 5 0.00017 32.4 6.9 82 17-103 191-292 (374)
331 3uko_A Alcohol dehydrogenase c 79.2 3.3 0.00011 33.6 5.7 84 16-103 192-294 (378)
332 2j3h_A NADP-dependent oxidored 79.2 3 0.0001 33.3 5.3 84 16-103 154-254 (345)
333 2hcy_A Alcohol dehydrogenase 1 78.8 2.4 8E-05 34.1 4.6 83 17-104 169-269 (347)
334 3two_A Mannitol dehydrogenase; 78.4 1.6 5.6E-05 35.0 3.5 81 16-103 175-264 (348)
335 3qv2_A 5-cytosine DNA methyltr 78.3 3.9 0.00013 33.2 5.8 103 18-120 10-150 (327)
336 1e3j_A NADP(H)-dependent ketos 78.0 6.5 0.00022 31.4 7.1 82 17-103 168-270 (352)
337 2d8a_A PH0655, probable L-thre 78.0 4.6 0.00016 32.3 6.1 83 17-104 167-267 (348)
338 2fzw_A Alcohol dehydrogenase c 77.6 5.3 0.00018 32.2 6.4 82 17-103 190-291 (373)
339 3uog_A Alcohol dehydrogenase; 77.4 5.1 0.00017 32.3 6.3 84 16-104 188-287 (363)
340 1p0f_A NADP-dependent alcohol 77.1 5.1 0.00018 32.4 6.2 82 17-103 191-292 (373)
341 1e3i_A Alcohol dehydrogenase, 76.8 6.6 0.00023 31.7 6.8 82 17-103 195-296 (376)
342 4dvj_A Putative zinc-dependent 76.6 3.3 0.00011 33.5 5.0 83 17-103 171-269 (363)
343 1zkd_A DUF185; NESG, RPR58, st 76.5 1.7 5.8E-05 36.4 3.1 39 18-56 81-131 (387)
344 3ip1_A Alcohol dehydrogenase, 75.7 10 0.00036 31.0 7.8 39 16-54 212-256 (404)
345 4had_A Probable oxidoreductase 73.6 13 0.00045 29.5 7.8 51 19-69 24-96 (350)
346 2km1_A Protein DRE2; yeast, an 72.5 3.7 0.00013 29.3 3.7 39 58-102 58-96 (136)
347 1eg2_A Modification methylase 72.5 2.3 7.7E-05 34.4 2.9 24 84-107 86-109 (319)
348 3qwb_A Probable quinone oxidor 72.2 4 0.00014 32.4 4.3 83 16-103 147-246 (334)
349 1rjd_A PPM1P, carboxy methyl t 71.9 2.9 9.8E-05 34.1 3.4 39 18-57 98-141 (334)
350 1yb5_A Quinone oxidoreductase; 71.8 6.7 0.00023 31.6 5.6 82 17-103 170-268 (351)
351 2eih_A Alcohol dehydrogenase; 71.7 6.3 0.00022 31.4 5.4 83 16-103 165-264 (343)
352 2zb4_A Prostaglandin reductase 70.4 9.5 0.00033 30.5 6.2 81 19-103 162-259 (357)
353 4dcm_A Ribosomal RNA large sub 69.7 14 0.00049 30.2 7.2 82 18-108 39-140 (375)
354 2o3j_A UDP-glucose 6-dehydroge 69.7 20 0.00067 30.4 8.3 101 19-119 10-151 (481)
355 4f3n_A Uncharacterized ACR, CO 69.0 2.7 9.1E-05 35.7 2.6 38 18-55 138-185 (432)
356 2dq4_A L-threonine 3-dehydroge 68.9 3.8 0.00013 32.7 3.5 80 18-103 165-261 (343)
357 1rjw_A ADH-HT, alcohol dehydro 68.7 12 0.00039 29.8 6.3 82 17-103 164-260 (339)
358 2uyo_A Hypothetical protein ML 68.5 28 0.00094 27.8 8.5 85 19-104 104-218 (310)
359 3g7u_A Cytosine-specific methy 68.4 2.6 8.9E-05 34.9 2.4 39 19-57 3-45 (376)
360 1g60_A Adenine-specific methyl 68.4 7.8 0.00027 29.8 5.1 23 83-105 53-75 (260)
361 2j8z_A Quinone oxidoreductase; 68.2 6.4 0.00022 31.6 4.7 84 16-104 161-261 (354)
362 1vj0_A Alcohol dehydrogenase, 67.6 11 0.00036 30.7 6.0 83 17-103 195-297 (380)
363 2c0c_A Zinc binding alcohol de 67.2 13 0.00044 29.9 6.4 83 17-104 163-261 (362)
364 2zig_A TTHA0409, putative modi 67.0 2.8 9.4E-05 33.2 2.2 22 84-105 77-98 (297)
365 1wly_A CAAR, 2-haloacrylate re 66.5 10 0.00034 30.0 5.5 83 17-104 145-244 (333)
366 2dph_A Formaldehyde dismutase; 66.2 3.3 0.00011 34.0 2.6 37 17-54 185-228 (398)
367 3jyn_A Quinone oxidoreductase; 65.7 5.5 0.00019 31.5 3.8 83 16-103 139-238 (325)
368 1boo_A Protein (N-4 cytosine-s 64.3 3.5 0.00012 33.2 2.4 24 83-106 63-86 (323)
369 4dup_A Quinone oxidoreductase; 64.3 8.3 0.00028 30.9 4.7 83 16-103 166-264 (353)
370 1qor_A Quinone oxidoreductase; 63.8 6.9 0.00024 30.9 4.0 82 17-103 140-238 (327)
371 4h0n_A DNMT2; SAH binding, tra 62.3 5.9 0.0002 32.1 3.4 38 19-56 4-47 (333)
372 4eye_A Probable oxidoreductase 61.8 9.8 0.00034 30.3 4.7 83 16-103 158-256 (342)
373 1m6y_A S-adenosyl-methyltransf 60.9 28 0.00094 27.7 7.1 22 84-105 225-246 (301)
374 3pid_A UDP-glucose 6-dehydroge 60.7 35 0.0012 28.7 8.0 95 19-120 37-170 (432)
375 2qrv_A DNA (cytosine-5)-methyl 56.7 16 0.00054 29.1 5.0 39 18-56 16-60 (295)
376 1wg8_A Predicted S-adenosylmet 55.7 5.5 0.00019 31.9 2.1 23 84-106 213-235 (285)
377 1kol_A Formaldehyde dehydrogen 55.5 10 0.00036 30.8 3.8 38 17-54 185-228 (398)
378 3fbg_A Putative arginate lyase 55.5 19 0.00064 28.7 5.3 82 17-103 150-247 (346)
379 1lss_A TRK system potassium up 54.7 43 0.0015 22.0 7.2 37 18-54 4-45 (140)
380 3tka_A Ribosomal RNA small sub 53.8 6.1 0.00021 32.6 2.1 23 84-106 254-276 (347)
381 1zcj_A Peroxisomal bifunctiona 53.4 29 0.00099 29.2 6.4 36 19-54 38-78 (463)
382 3l9w_A Glutathione-regulated p 52.9 57 0.002 27.0 8.0 82 18-110 4-108 (413)
383 2oo3_A Protein involved in cat 52.4 11 0.00038 30.1 3.4 95 19-121 93-217 (283)
384 2y0c_A BCEC, UDP-glucose dehyd 51.6 42 0.0014 28.4 7.1 85 18-104 8-128 (478)
385 2b5w_A Glucose dehydrogenase; 51.6 33 0.0011 27.3 6.2 79 19-103 174-272 (357)
386 4fb5_A Probable oxidoreductase 49.8 93 0.0032 24.5 9.6 54 16-69 23-104 (393)
387 1yqd_A Sinapyl alcohol dehydro 48.9 15 0.00052 29.5 3.8 81 17-103 187-281 (366)
388 3ec7_A Putative dehydrogenase; 48.7 50 0.0017 26.4 6.9 37 18-54 23-67 (357)
389 2cf5_A Atccad5, CAD, cinnamyl 48.6 9.6 0.00033 30.6 2.5 83 17-103 180-274 (357)
390 3mog_A Probable 3-hydroxybutyr 47.9 44 0.0015 28.4 6.7 37 19-55 6-47 (483)
391 3vtf_A UDP-glucose 6-dehydroge 47.5 25 0.00086 29.7 5.0 86 17-104 20-144 (444)
392 3l4b_C TRKA K+ channel protien 46.9 49 0.0017 24.1 6.2 35 20-54 2-41 (218)
393 3gaz_A Alcohol dehydrogenase s 46.1 38 0.0013 26.8 5.8 80 16-103 149-245 (343)
394 3u3x_A Oxidoreductase; structu 45.8 1.1E+02 0.0038 24.3 9.1 52 17-68 25-97 (361)
395 2pjd_A Ribosomal RNA small sub 45.5 1.1E+02 0.0038 24.1 8.9 93 19-120 21-128 (343)
396 3nx4_A Putative oxidoreductase 45.2 29 0.00098 27.1 4.8 79 20-103 149-240 (324)
397 3m2t_A Probable dehydrogenase; 43.9 23 0.00079 28.4 4.1 52 17-68 4-77 (359)
398 4gmf_A Yersiniabactin biosynth 43.8 1.3E+02 0.0044 24.4 9.0 53 18-70 7-77 (372)
399 4a27_A Synaptic vesicle membra 43.4 29 0.001 27.5 4.7 81 16-103 141-237 (349)
400 3gg2_A Sugar dehydrogenase, UD 43.3 86 0.0029 26.2 7.7 84 19-104 3-122 (450)
401 3mag_A VP39; methylated adenin 43.0 6.9 0.00024 31.7 0.8 68 18-103 61-137 (307)
402 1dlj_A UDP-glucose dehydrogena 43.0 74 0.0025 26.0 7.2 95 20-119 2-133 (402)
403 3dmg_A Probable ribosomal RNA 42.6 1.1E+02 0.0036 25.0 8.0 87 18-111 46-146 (381)
404 2q3e_A UDP-glucose 6-dehydroge 42.5 87 0.003 26.1 7.6 102 19-120 6-148 (467)
405 1mv8_A GMD, GDP-mannose 6-dehy 42.4 74 0.0025 26.2 7.1 82 20-103 2-122 (436)
406 1zej_A HBD-9, 3-hydroxyacyl-CO 41.8 56 0.0019 25.8 6.0 38 18-55 12-53 (293)
407 3ojo_A CAP5O; rossmann fold, c 41.5 35 0.0012 28.6 5.0 99 19-117 12-143 (431)
408 3krt_A Crotonyl COA reductase; 41.2 47 0.0016 27.5 5.8 38 16-54 227-271 (456)
409 3db2_A Putative NADPH-dependen 40.3 1.3E+02 0.0046 23.6 9.0 53 18-70 5-77 (354)
410 3g79_A NDP-N-acetyl-D-galactos 39.6 66 0.0023 27.3 6.5 87 18-104 18-147 (478)
411 3tri_A Pyrroline-5-carboxylate 38.8 83 0.0028 24.2 6.5 73 18-101 3-95 (280)
412 4a0s_A Octenoyl-COA reductase/ 38.4 76 0.0026 26.0 6.6 38 16-54 219-263 (447)
413 1h2b_A Alcohol dehydrogenase; 37.8 25 0.00085 28.1 3.4 37 17-54 186-229 (359)
414 3k6j_A Protein F01G10.3, confi 37.0 85 0.0029 26.5 6.7 29 19-47 55-88 (460)
415 3ezy_A Dehydrogenase; structur 36.9 1.5E+02 0.0051 23.2 8.2 50 20-69 4-74 (344)
416 3gqv_A Enoyl reductase; medium 36.7 74 0.0025 25.4 6.1 81 17-103 164-262 (371)
417 4a7p_A UDP-glucose dehydrogena 36.3 51 0.0018 27.7 5.2 101 18-119 8-145 (446)
418 3ado_A Lambda-crystallin; L-gu 35.9 53 0.0018 26.3 5.1 39 18-56 6-49 (319)
419 2vn8_A Reticulon-4-interacting 35.6 77 0.0026 25.3 6.1 82 17-104 183-280 (375)
420 3moi_A Probable dehydrogenase; 34.5 1E+02 0.0035 24.8 6.7 51 19-69 3-74 (387)
421 3ubt_Y Modification methylase 33.4 29 0.001 27.2 3.1 38 20-57 2-43 (331)
422 1xa0_A Putative NADPH dependen 32.9 34 0.0012 26.7 3.4 76 20-103 152-245 (328)
423 4e12_A Diketoreductase; oxidor 32.3 1.3E+02 0.0043 23.0 6.6 37 19-55 5-46 (283)
424 3e9m_A Oxidoreductase, GFO/IDH 31.8 1.8E+02 0.0062 22.6 9.6 91 18-122 5-119 (330)
425 3q2i_A Dehydrogenase; rossmann 31.4 1.9E+02 0.0064 22.7 8.7 52 18-69 13-85 (354)
426 3gt0_A Pyrroline-5-carboxylate 31.4 86 0.0029 23.4 5.4 72 19-101 3-94 (247)
427 3euw_A MYO-inositol dehydrogen 31.2 1E+02 0.0035 24.1 6.1 52 18-69 4-75 (344)
428 1tt7_A YHFP; alcohol dehydroge 30.7 42 0.0014 26.2 3.6 76 20-103 153-246 (330)
429 3rc1_A Sugar 3-ketoreductase; 30.5 2E+02 0.0068 22.6 9.6 93 16-122 25-141 (350)
430 1bg6_A N-(1-D-carboxylethyl)-L 29.8 1.4E+02 0.0047 23.2 6.6 38 18-55 4-46 (359)
431 3e18_A Oxidoreductase; dehydro 29.7 1.4E+02 0.0049 23.6 6.7 53 17-69 4-75 (359)
432 3b1f_A Putative prephenate deh 29.4 1.1E+02 0.0038 23.2 5.9 76 18-104 6-101 (290)
433 3me5_A Cytosine-specific methy 29.2 57 0.0019 27.8 4.3 39 18-56 88-130 (482)
434 3dty_A Oxidoreductase, GFO/IDH 28.4 2.3E+02 0.0078 22.7 8.1 39 16-54 10-59 (398)
435 3llv_A Exopolyphosphatase-rela 28.4 1.3E+02 0.0044 19.9 6.9 37 18-54 6-47 (141)
436 3pi7_A NADH oxidoreductase; gr 28.0 1.2E+02 0.0039 23.9 5.8 69 30-103 184-262 (349)
437 1zh8_A Oxidoreductase; TM0312, 27.8 2.2E+02 0.0074 22.3 11.5 52 18-69 18-92 (340)
438 4e21_A 6-phosphogluconate dehy 26.9 1.8E+02 0.0063 23.3 6.9 93 18-121 22-133 (358)
439 2p2s_A Putative oxidoreductase 26.4 1.1E+02 0.0037 23.9 5.4 54 16-69 2-76 (336)
440 3pxx_A Carveol dehydrogenase; 26.2 1.6E+02 0.0056 21.9 6.3 29 17-45 9-43 (287)
441 3zwc_A Peroxisomal bifunctiona 26.1 1.2E+02 0.0041 27.3 6.1 38 19-56 317-359 (742)
442 3d1l_A Putative NADP oxidoredu 26.0 1E+02 0.0034 23.1 4.9 75 19-104 11-102 (266)
443 2hwk_A Helicase NSP2; rossman 24.4 48 0.0017 26.8 2.8 35 86-120 236-272 (320)
444 3cea_A MYO-inositol 2-dehydrog 24.2 2.5E+02 0.0085 21.7 8.2 37 18-54 8-52 (346)
445 2vhw_A Alanine dehydrogenase; 23.9 1.2E+02 0.0041 24.5 5.3 79 17-104 167-268 (377)
446 2wtb_A MFP2, fatty acid multif 23.8 1.9E+02 0.0064 25.8 6.9 36 19-54 313-353 (725)
447 2dpo_A L-gulonate 3-dehydrogen 23.6 1.6E+02 0.0054 23.3 5.9 38 18-55 6-48 (319)
448 4dll_A 2-hydroxy-3-oxopropiona 23.2 2.6E+02 0.0089 21.6 7.1 94 18-121 31-142 (320)
449 3qha_A Putative oxidoreductase 22.9 2.6E+02 0.0087 21.4 7.3 91 19-120 16-122 (296)
450 1vpd_A Tartronate semialdehyde 22.7 2.3E+02 0.0078 21.4 6.5 92 19-120 6-116 (299)
451 3ce6_A Adenosylhomocysteinase; 22.5 83 0.0028 26.9 4.2 74 17-104 273-361 (494)
452 3c85_A Putative glutathione-re 22.5 2E+02 0.0068 19.9 8.0 37 18-54 39-81 (183)
453 4gqa_A NAD binding oxidoreduct 22.4 3E+02 0.01 22.0 7.5 51 19-69 27-106 (412)
454 3tqh_A Quinone oxidoreductase; 21.7 1.9E+02 0.0065 22.3 5.9 83 16-104 151-245 (321)
455 3tos_A CALS11; methyltransfera 20.7 97 0.0033 24.1 3.9 19 84-102 197-215 (257)
456 2h78_A Hibadh, 3-hydroxyisobut 20.1 2.9E+02 0.0098 20.9 7.2 92 19-120 4-114 (302)
457 1iz0_A Quinone oxidoreductase; 20.0 50 0.0017 25.4 2.1 81 17-103 125-217 (302)
No 1
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=100.00 E-value=3.9e-32 Score=215.98 Aligned_cols=167 Identities=63% Similarity=1.076 Sum_probs=128.0
Q ss_pred CCCCccCCCCCCCC----------------CCCCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHh---
Q psy13086 1 MDWSPLYPELKDPT----------------CEKKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEW--- 56 (169)
Q Consensus 1 ~~~~~~f~~~~~~~----------------~~~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~--- 56 (169)
|||+..|+..-++. ..++.+|||||||+| +|..+|+.+|+|||+|+.|++.|++++
T Consensus 14 ~~w~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 14 MDWSELYPEFFAPLTQNQSHDDPKDKKEKRAQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRAL 93 (235)
T ss_dssp CCCTTTCTTC----------------------CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCchhhCccccccccccccccccccccccccCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHH
Confidence 79999999763211 234578999999999 788899999999999999999886431
Q ss_pred -----------c----------------cccceEEEeCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCChHH
Q psy13086 57 -----------S----------------LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDL 109 (169)
Q Consensus 57 -----------~----------------~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~ 109 (169)
. +++|.|++.|++||++.+|++++++.+.++++++++|||||.|+++++.+.|
T Consensus 94 ~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~ 173 (235)
T 3ckk_A 94 RAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLEL 173 (235)
T ss_dssp HHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHH
T ss_pred HHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHH
Confidence 1 4678889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHHcCCCeEEEEEEeccC
Q psy13086 110 HDWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTRNKGEKFCAVFRRGRH 168 (169)
Q Consensus 110 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~g~~i~~~~~~r~~~ 168 (169)
..|+.+.+..++.|......... .++........|+||++|.++|..+|+++|+|++.
T Consensus 174 ~~~~~~~l~~~~~f~~~~~~~~~-~~~~~~~~~~~t~~e~k~~~~G~~~~~~~f~r~~~ 231 (235)
T 3ckk_A 174 HDWMCTHFEEHPLFERVPLEDLS-EDPVVGHLGTSTEEGKKVLRNGGKNFPAIFRRIQD 231 (235)
T ss_dssp HHHHHHHHHTSTTEEEECGGGGT-TCTTGGGTTTSSHHHHHHHHTTCCCEEEEEEECCC
T ss_pred HHHHHHHHHHCCCccccCchhcc-cCccccCCCCCCHHHHHHHHCCCCeEEEEEEECCC
Confidence 99999999999999887543321 22222345678999999999999999999999864
No 2
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.97 E-value=1.1e-31 Score=210.98 Aligned_cols=157 Identities=17% Similarity=0.185 Sum_probs=136.7
Q ss_pred CCCCccCCCCCCCCCCCCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc------------------
Q psy13086 1 MDWSPLYPELKDPTCEKKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS------------------ 57 (169)
Q Consensus 1 ~~~~~~f~~~~~~~~~~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~------------------ 57 (169)
+||.++|++. +++|||||||+| +|..+|+.+|+|||+|+.|++.|++++.
T Consensus 25 ~d~~~~f~~~-------~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l 97 (218)
T 3dxy_A 25 LDFPALFGRE-------APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVL 97 (218)
T ss_dssp CCHHHHHSSC-------CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHH
T ss_pred CCHHHHcCCC-------CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHH
Confidence 4677788774 689999999999 7788999999999999999999876532
Q ss_pred ------cccceEEEeCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceecCcccc
Q psy13086 58 ------LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVECDLEEL 131 (169)
Q Consensus 58 ------~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~~~~~~ 131 (169)
+++|.|.+.||+||++..|++++++.+.++++++++|||||.|+++||.+.|++++.+.+..++.|..+....
T Consensus 98 ~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~~~~~~~- 176 (218)
T 3dxy_A 98 HKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESN- 176 (218)
T ss_dssp HHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEECCTTS-
T ss_pred HHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcccccCcC-
Confidence 5788999999999999999999999999999999999999999999999999999999999999898875432
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHcCCCeEEEEEEecc
Q psy13086 132 KRTDPVVDKLYQSTEEGQKVTRNKGEKFCAVFRRGR 167 (169)
Q Consensus 132 ~~~~~~~~~~~~~T~ye~~~~~~g~~i~~~~~~r~~ 167 (169)
+|... ....+.|+||+++.++|+.+++++|+|++
T Consensus 177 ~~~~~--~~~~~~t~fE~k~~~~G~~~~~~~~~~~~ 210 (218)
T 3dxy_A 177 DYVPR--PASRPVTKFEQRGHRLGHGVWDLMFERVK 210 (218)
T ss_dssp SCBCC--CTTSCCCTTCCTTCTTCCSCEEEEEEECC
T ss_pred ccCCC--CCCCCCcHHHHHHHHCCCCeEEEEEEEcc
Confidence 22221 34578999999999999999999999964
No 3
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.96 E-value=5.5e-30 Score=200.01 Aligned_cols=155 Identities=19% Similarity=0.276 Sum_probs=129.6
Q ss_pred CCCccCCCCCCCCCCCCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------
Q psy13086 2 DWSPLYPELKDPTCEKKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS------------------- 57 (169)
Q Consensus 2 ~~~~~f~~~~~~~~~~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~------------------- 57 (169)
+|.++|++. +.+|||||||+| +|+.+|+.+++|||+|+.|++.|++++.
T Consensus 30 ~~~~~f~~~-------~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~ 102 (213)
T 2fca_A 30 KWNTVFGND-------NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTD 102 (213)
T ss_dssp CHHHHHTSC-------CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHH
T ss_pred CHHHHcCCC-------CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh
Confidence 677788753 688999999999 7778899999999999999999987532
Q ss_pred ----cccceEEEeCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceecCcc-ccc
Q psy13086 58 ----LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVECDLE-ELK 132 (169)
Q Consensus 58 ----~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~~~~-~~~ 132 (169)
+++|.|++.|++||++..|++++++...++++++++|||||.|++.+|...+..++.+.+..++ |...... +..
T Consensus 103 ~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g-~~~~~~~~d~~ 181 (213)
T 2fca_A 103 VFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYG-LLLTYVSLDLH 181 (213)
T ss_dssp HCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHT-CEEEEEESSGG
T ss_pred hcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC-Ccccccccccc
Confidence 4688899999999999999999988899999999999999999999999999999999888775 4432111 111
Q ss_pred cCCCCCCCCCCCCHHHHHHHHcCCCeEEEEEEecc
Q psy13086 133 RTDPVVDKLYQSTEEGQKVTRNKGEKFCAVFRRGR 167 (169)
Q Consensus 133 ~~~~~~~~~~~~T~ye~~~~~~g~~i~~~~~~r~~ 167 (169)
..+ .+..+.|+||+++.++|++||+++|+|++
T Consensus 182 -~~~--~~~~~~t~~E~~~~~~G~~i~~~~~~~~~ 213 (213)
T 2fca_A 182 -NSN--LEGNIMTEYEEKFSALGQPIYRAEVEWRT 213 (213)
T ss_dssp -GSS--CTTCCCCTTGGGSSSSSCCCEEEEEECCC
T ss_pred -ccc--CCCCCCcHHHHHHHHCCCCeEEEEEEECC
Confidence 122 35578899999999999999999999874
No 4
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.96 E-value=6.6e-29 Score=197.26 Aligned_cols=167 Identities=56% Similarity=0.914 Sum_probs=128.2
Q ss_pred CCCCccCCCCCC---CCCCCCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHh-------------c--
Q psy13086 1 MDWSPLYPELKD---PTCEKKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEW-------------S-- 57 (169)
Q Consensus 1 ~~~~~~f~~~~~---~~~~~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~-------------~-- 57 (169)
+||.++|++... ..+.++.+|||||||+| ++...|+.+|+|||+|+.|++.|++++ .
T Consensus 30 ~~w~~~f~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv 109 (246)
T 2vdv_E 30 MDWSKLYPYYKNAENGQMTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNI 109 (246)
T ss_dssp CCGGGTCGGGBC----CBSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTE
T ss_pred CCHHHHhCcccccccccCCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcE
Confidence 589999987210 00123678999999999 677788889999999999999886531 1
Q ss_pred -----------------cccceEEEeCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcC
Q psy13086 58 -----------------LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEH 120 (169)
Q Consensus 58 -----------------~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~ 120 (169)
+++|.|.+.||+||++.+|++++++...+++++.++|||||.|++.++...+.+|+.+.+..+
T Consensus 110 ~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~ 189 (246)
T 2vdv_E 110 NVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEH 189 (246)
T ss_dssp EEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHS
T ss_pred EEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhC
Confidence 356777888999999999999998899999999999999999999999999999999999999
Q ss_pred CCceecCccccccCCCCCCCCCCCCHHHHHHHHcCCCeEEEEEEeccC
Q psy13086 121 PLFVECDLEELKRTDPVVDKLYQSTEEGQKVTRNKGEKFCAVFRRGRH 168 (169)
Q Consensus 121 ~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~g~~i~~~~~~r~~~ 168 (169)
+.|..+...... .++......+.|+||.++.++|.++|.++|+|+.+
T Consensus 190 ~~~~~~~~~~~~-~d~~~~~~~~~t~~e~k~~~~g~~~~~~~~~k~~~ 236 (246)
T 2vdv_E 190 PLFERLSKEWEE-NDECVKIMRNATEEGKKVERKKGDKFVACFTRLPT 236 (246)
T ss_dssp TTEEECCHHHHH-TCHHHHHHHHSSHHHHHHHHTTCCCEEEEEEECCC
T ss_pred cCeEecCccccc-cCcccccCCCCCHHHHHHHHCCCCeEEEEEEECCC
Confidence 888876544321 11110122457999999999999999999999753
No 5
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.95 E-value=5.1e-27 Score=182.27 Aligned_cols=153 Identities=20% Similarity=0.281 Sum_probs=126.5
Q ss_pred CCCccCCCCCCCCCCCCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------
Q psy13086 2 DWSPLYPELKDPTCEKKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS------------------- 57 (169)
Q Consensus 2 ~~~~~f~~~~~~~~~~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~------------------- 57 (169)
+|.++|++. +.+|||||||+| ++..+|+.+++|||+|+.|++.|++++.
T Consensus 33 ~~~~~f~~~-------~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~ 105 (214)
T 1yzh_A 33 KWRDLFGND-------NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTD 105 (214)
T ss_dssp THHHHHTSC-------CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGG
T ss_pred CHHHHcCCC-------CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHh
Confidence 566677653 678999999999 7778899999999999999999987531
Q ss_pred ----cccceEEEeCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceecCcc-ccc
Q psy13086 58 ----LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVECDLE-ELK 132 (169)
Q Consensus 58 ----~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~~~~-~~~ 132 (169)
+++|.|.+.+|+||++.+|+++++....+++++.++|||||.+++.++...+..++.+.+.+++ |...... +..
T Consensus 106 ~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~d~~ 184 (214)
T 1yzh_A 106 YFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYG-MKLNGVWLDLH 184 (214)
T ss_dssp TSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHT-CEEEEEESSGG
T ss_pred hcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCC-Ceeeecccccc
Confidence 4578899999999999999999888899999999999999999999999999988888888765 5443211 111
Q ss_pred cCCCCCCCCCCCCHHHHHHHHcCCCeEEEEEEe
Q psy13086 133 RTDPVVDKLYQSTEEGQKVTRNKGEKFCAVFRR 165 (169)
Q Consensus 133 ~~~~~~~~~~~~T~ye~~~~~~g~~i~~~~~~r 165 (169)
.. .....+.|+||+++.++|++||+++|++
T Consensus 185 -~~--~~~~~~~t~~e~~~~~~g~~i~~~~~~~ 214 (214)
T 1yzh_A 185 -AS--DFEGNVMTEYEQKFSNKGQVIYRVEAEF 214 (214)
T ss_dssp -GS--CCCCCCCCHHHHHTGGGCCCCEEEEEEC
T ss_pred -cc--CCCCCCCcHHHHHHHHCCCCeEEEEEEC
Confidence 11 1356789999999999999999999874
No 6
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.61 E-value=9e-16 Score=123.35 Aligned_cols=146 Identities=10% Similarity=0.036 Sum_probs=81.9
Q ss_pred CCCeEEEEcCccc-----ccCcC--CCCcEEEEeCCHHHHHHHHHHhc--c---ccceEEE---eCCCCcccc------c
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF--PSTLILGLEIRVKVSDYVIDEWS--L---YLKKMFF---LYPDPHFKR------C 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~--p~~~v~GiDis~~~l~~a~~~~~--~---~~d~v~~---~f~d~~f~~------~ 75 (169)
++.+||||||||| +++.+ |+++|+|||+|+.|++.|++++. + .++.+.- .++.+.++. .
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l 149 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTL 149 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeee
Confidence 4789999999999 55553 57899999999999999998865 1 1111110 112222321 2
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEeC----ChHHHHHHHH---HHhcCCCceecCccccc-c-CCCCCCCCCCCCH
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTITD----VKDLHDWIVS---HFTEHPLFVECDLEELK-R-TDPVVDKLYQSTE 146 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d----~~~~~~~~~~---~~~~~~~f~~~~~~~~~-~-~~~~~~~~~~~T~ 146 (169)
|+........+|++++|+|||||.|++... .+....++.. .+....++......... . .+. ....+..+
T Consensus 150 ~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~--~~~~s~~~ 227 (261)
T 4gek_A 150 QFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENV--MLTDSVET 227 (261)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHH--CCCBCHHH
T ss_pred eecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhccc--ccCCCHHH
Confidence 222111124689999999999999998742 2222222221 11111222221100000 0 001 12345567
Q ss_pred HHHHHHHcCCCeEEEEEE
Q psy13086 147 EGQKVTRNKGEKFCAVFR 164 (169)
Q Consensus 147 ye~~~~~~g~~i~~~~~~ 164 (169)
+..+..+.|.....+.|+
T Consensus 228 ~~~~L~~AGF~~ve~~fq 245 (261)
T 4gek_A 228 HKARLHKAGFEHSELWFQ 245 (261)
T ss_dssp HHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEE
Confidence 788889999886655543
No 7
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.60 E-value=5.3e-16 Score=121.98 Aligned_cols=84 Identities=18% Similarity=0.107 Sum_probs=58.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCC-HHHHHHH---HHHhc----------------------cccceEEEe
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIR-VKVSDYV---IDEWS----------------------LYLKKMFFL 66 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis-~~~l~~a---~~~~~----------------------~~~d~v~~~ 66 (169)
+.+|||||||+| +++..|+.+|+|||+| +.|++.| ++++. ..++.+.+.
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~ 104 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISIL 104 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEe
Confidence 678999999999 5666788999999999 7788877 54432 122333344
Q ss_pred CCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 67 YPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 67 f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
|+.+. . +...+.....++++++|+|||||.+++++
T Consensus 105 ~~~~~--~-~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 105 FPWGT--L-LEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp SCCHH--H-HHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCcH--H-hhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 43322 1 11222234679999999999999999944
No 8
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.57 E-value=4e-15 Score=117.35 Aligned_cols=84 Identities=13% Similarity=-0.028 Sum_probs=57.8
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----------------------cccceEEEeCCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----------------------LYLKKMFFLYPD 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----------------------~~~d~v~~~f~d 69 (169)
++.+|||||||+| +++..| .+++|||+|+.|++.|+++.. +++|.|+. |
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~---D 135 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY---D 135 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE---C
T ss_pred CCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE---e
Confidence 3679999999999 555555 489999999999999998654 23444321 2
Q ss_pred CcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 70 PHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 70 ~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.+....+.........++++++|+|||||+|.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 21111111111123679999999999999998853
No 9
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.57 E-value=1.8e-14 Score=112.00 Aligned_cols=146 Identities=12% Similarity=0.127 Sum_probs=85.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--cccceEEEeCCC----Ccccc------cchhhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--LYLKKMFFLYPD----PHFKR------CKYKWR 80 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--~~~d~v~~~f~d----~~f~~------~h~~~~ 80 (169)
+.+|||||||+| ++..+|+.+++|+|+|+.|++.|++++. ..+..+...+.+ ..||. .|+...
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 124 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHLED 124 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGSCH
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccCCH
Confidence 689999999999 6777889999999999999999998764 111111111100 12322 122111
Q ss_pred cccHHHHHHHHHhccCCcEEEEEeCC----hHHH----HHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHH
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTITDV----KDLH----DWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVT 152 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~d~----~~~~----~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~ 152 (169)
.....++++++++|||||.+++.+.. .... ......+. ...+......... ...-+...++..++.....
T Consensus 125 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~ 202 (234)
T 3dtn_A 125 EDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVE-NSGLTEEEIAAGY-ERSKLDKDIEMNQQLNWLK 202 (234)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHH-TSSCCHHHHHTTC-----CCCCCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHH-hcCCCHHHHHHHH-HhcccccccCHHHHHHHHH
Confidence 11135999999999999999998632 1111 11111112 2233221111000 0001123456678888999
Q ss_pred HcCCCeEEEEEEe
Q psy13086 153 RNKGEKFCAVFRR 165 (169)
Q Consensus 153 ~~g~~i~~~~~~r 165 (169)
+.|...-.+.++.
T Consensus 203 ~aGF~~v~~~~~~ 215 (234)
T 3dtn_A 203 EAGFRDVSCIYKY 215 (234)
T ss_dssp HTTCEEEEEEEEE
T ss_pred HcCCCceeeeeee
Confidence 9999988777764
No 10
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.54 E-value=6.9e-14 Score=106.93 Aligned_cols=105 Identities=15% Similarity=0.215 Sum_probs=72.1
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEE---eCC-----CCcccccchhhh-c
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFF---LYP-----DPHFKRCKYKWR-I 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~---~f~-----d~~f~~~h~~~~-~ 81 (169)
++.+|||||||+| ++...|..+++|+|+|+.|++.|++++. ..++.+.+ ... .+.||..-.... -
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~ 119 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG 119 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc
Confidence 3679999999999 6777888999999999999999998764 11222221 111 122332110000 0
Q ss_pred ccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCC
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHP 121 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~ 121 (169)
....+++++.++|||||.+++.+........+...+..++
T Consensus 120 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 120 MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHG 159 (204)
T ss_dssp CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCC
Confidence 1368999999999999999998877666666666666665
No 11
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.52 E-value=9e-15 Score=117.39 Aligned_cols=76 Identities=12% Similarity=0.151 Sum_probs=55.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHH--hc-------------cccceEEEeCCCCcccccch
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDE--WS-------------LYLKKMFFLYPDPHFKRCKY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~--~~-------------~~~d~v~~~f~d~~f~~~h~ 77 (169)
..+|||||||+| ++... .+|+|||+|+.|++.|+++ +. +++|.|..... .|+
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~------~h~ 111 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQA------MHW 111 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSC------CTT
T ss_pred CCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeee------hhH
Confidence 578999999999 55543 6899999999999988653 21 34444443222 232
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.. .+.++++++|+|||||.|.+.+
T Consensus 112 ~~---~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 112 FD---LDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hh---HHHHHHHHHHHcCCCCEEEEEE
Confidence 21 3679999999999999998875
No 12
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.48 E-value=1.4e-13 Score=102.31 Aligned_cols=104 Identities=13% Similarity=0.105 Sum_probs=70.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccc-eEEEe------CCC--Ccccccchhhhcc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLK-KMFFL------YPD--PHFKRCKYKWRII 82 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d-~v~~~------f~d--~~f~~~h~~~~~~ 82 (169)
+.+|||||||+| ++..+|..+++|+|+|+.|++.|++++. ..++ .+.+. +++ ..||.......+.
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~~ 105 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGLT 105 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-TT
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCccc
Confidence 578999999999 6777788999999999999999998765 2222 22111 121 2343221111111
Q ss_pred cHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCC
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHP 121 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~ 121 (169)
...+++++.++|||||.+++.+............+..++
T Consensus 106 ~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 106 APGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFG 144 (178)
T ss_dssp CTTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcC
Confidence 246999999999999999998876655555555555544
No 13
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.47 E-value=7.5e-14 Score=104.92 Aligned_cols=86 Identities=12% Similarity=0.144 Sum_probs=56.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEEe---------CCCCcccccchh---
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFL---------YPDPHFKRCKYK--- 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~---------f~d~~f~~~h~~--- 78 (169)
++.+|||||||+| ++.. ..+|+|+|+|+.|++.|++++. ..++.+.+. +++..||.....
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 3689999999999 5555 6799999999999999988764 111111110 111222211000
Q ss_pred ----------hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 79 ----------WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 79 ----------~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..-....+++++.++|||||.+++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 00012468899999999999999875
No 14
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.46 E-value=3.1e-13 Score=104.81 Aligned_cols=135 Identities=10% Similarity=-0.003 Sum_probs=79.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEE----eCCCCccccc------chhhhcc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFF----LYPDPHFKRC------KYKWRII 82 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~----~f~d~~f~~~------h~~~~~~ 82 (169)
+.+|||||||+| ++... .+++|+|+|+.|++.|+++....++.+.. .+++..||.. |+...
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~-- 118 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDD-- 118 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSS--
T ss_pred CCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcC--
Confidence 568999999999 55554 38999999999999999875311111110 0233344432 22211
Q ss_pred cHHHHHHHH-HhccCCcEEEEEeCChHHHHHHHHHHhcCCCceec---CccccccCCCCCCCCCCCCHHHHHHHHcCCCe
Q psy13086 83 NQNLLSEYA-YVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVEC---DLEELKRTDPVVDKLYQSTEEGQKVTRNKGEK 158 (169)
Q Consensus 83 ~~~~l~~~~-rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~---~~~~~~~~~~~~~~~~~~T~ye~~~~~~g~~i 158 (169)
...++++++ |+|||||.+++.+.............. ..+... ..... ...+....+..+++....+.|..+
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~Gf~~ 193 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKM--GIISHNSAVTEAEF---AHGHRCTYALDTLERDASRAGLQV 193 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHT--TSSSSTTCCCHHHH---HTTCCCCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHc--Cccccchhcccccc---cccccccCCHHHHHHHHHHCCCeE
Confidence 268999999 999999999998765443222222111 111110 00000 011123456677888888899887
Q ss_pred EEE
Q psy13086 159 FCA 161 (169)
Q Consensus 159 ~~~ 161 (169)
-..
T Consensus 194 ~~~ 196 (250)
T 2p7i_A 194 TYR 196 (250)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 15
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.45 E-value=4.2e-13 Score=104.96 Aligned_cols=122 Identities=12% Similarity=0.067 Sum_probs=76.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------cccceEEEeCCCCcccccch
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------LYLKKMFFLYPDPHFKRCKY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------~~~d~v~~~f~d~~f~~~h~ 77 (169)
+.+|||||||+| ++.. +.+++|+|+|+.|++.|++++. +++|.|.+... .++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i~~~~~------l~~ 113 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGVMISHF------VEH 113 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEEEEESC------GGG
T ss_pred CCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEEEECCc------hhh
Confidence 578999999999 4443 5689999999999999987633 34555543221 112
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHHcCCC
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTRNKGE 157 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~g~~ 157 (169)
...-....++++++++|||||.+++.+............. . .+-+.........+....+.|..
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~l~~~l~~aGf~ 177 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFY-I---------------DPTHKKPVHPETLKFILEYLGFR 177 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHT-T---------------STTCCSCCCHHHHHHHHHHHTCE
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHh-c---------------CccccccCCHHHHHHHHHHCCCe
Confidence 1110126899999999999999999875543222111110 0 01011223445667777777877
Q ss_pred eEEEEE
Q psy13086 158 KFCAVF 163 (169)
Q Consensus 158 i~~~~~ 163 (169)
+....+
T Consensus 178 ~~~~~~ 183 (240)
T 3dli_A 178 DVKIEF 183 (240)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 655443
No 16
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.45 E-value=9.4e-14 Score=106.92 Aligned_cols=86 Identities=12% Similarity=0.007 Sum_probs=54.6
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc----------------ccceEEEe-----CCC-
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL----------------YLKKMFFL-----YPD- 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~----------------~~d~v~~~-----f~d- 69 (169)
++.+|||||||+| +++. +.+|+|||+|+.|++.|+++... .+..+... +++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 3689999999999 5554 56999999999999999887421 11111111 111
Q ss_pred Cccccc------chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 70 PHFKRC------KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 70 ~~f~~~------h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..||.. ++...-....++++++|+|||||++++.+
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 223321 11110012468999999999999855543
No 17
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=7.1e-13 Score=105.97 Aligned_cols=127 Identities=12% Similarity=0.082 Sum_probs=78.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------cccceEEEeCCCCcccccc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------LYLKKMFFLYPDPHFKRCK 76 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------~~~d~v~~~f~d~~f~~~h 76 (169)
++.+|||||||+| ++. +..+++|+|+|+.|++.|+++.+ +++|.|..... .|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~------l~ 128 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFSNAM------LH 128 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEEESC------GG
T ss_pred CCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEEcch------hh
Confidence 3679999999999 333 77899999999999999998642 23344333221 11
Q ss_pred hhhhcccHHHHHHHHHhccCCcEEEEEeCCh----HHHHHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHH
Q psy13086 77 YKWRIINQNLLSEYAYVLSEGGIVYTITDVK----DLHDWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVT 152 (169)
Q Consensus 77 ~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~----~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~ 152 (169)
+.. ....++++++|+|||||.+++.+... .....+...+...+. ... . . ..++ ......+++....
T Consensus 129 ~~~--d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~--~-~~~~--~~~~~~~~~~~l~ 198 (279)
T 3ccf_A 129 WVK--EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGI-HNP--Q--A-LNPW--YFPSIGEYVNILE 198 (279)
T ss_dssp GCS--CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTC-CCG--G--G-GCCC--CCCCHHHHHHHHH
T ss_pred hCc--CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCC-ccc--c--C-cCce--eCCCHHHHHHHHH
Confidence 111 12579999999999999999976432 222222233322221 100 0 0 1121 3345667788888
Q ss_pred HcCCCeEEE
Q psy13086 153 RNKGEKFCA 161 (169)
Q Consensus 153 ~~g~~i~~~ 161 (169)
+.|..+-..
T Consensus 199 ~aGf~~~~~ 207 (279)
T 3ccf_A 199 KQGFDVTYA 207 (279)
T ss_dssp HHTEEEEEE
T ss_pred HcCCEEEEE
Confidence 888776443
No 18
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.44 E-value=2.8e-13 Score=106.77 Aligned_cols=92 Identities=16% Similarity=0.234 Sum_probs=70.2
Q ss_pred CCCeEEEEcCccc-----ccCc-CCCCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPM-FPSTLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPD 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~-~p~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d 69 (169)
++.+|||+|||+| ++.. .|..+++|+|+|+.+++.|++++. .++|.|.+..++
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~~ 172 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDLPQ 172 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECSSC
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECCCC
Confidence 3679999999999 5566 678999999999999999988753 224444433332
Q ss_pred CcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCC
Q psy13086 70 PHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHP 121 (169)
Q Consensus 70 ~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~ 121 (169)
+ ..+++++.++|||||.+++.+...+......+.+.+++
T Consensus 173 ~-------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 173 P-------------ERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp G-------------GGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred H-------------HHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 2 35899999999999999998877666666666666665
No 19
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.44 E-value=8.1e-13 Score=101.91 Aligned_cols=102 Identities=13% Similarity=0.037 Sum_probs=68.8
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccc-eEEE---eCC-----CCcccccchhhhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLK-KMFF---LYP-----DPHFKRCKYKWRI 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d-~v~~---~f~-----d~~f~~~h~~~~~ 81 (169)
++.+|||||||+| ++.. ..+|+|+|+|+.|++.|++++. ..++ .+.+ ... .+.||..-....+
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~ 132 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG 132 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc
Confidence 4678999999999 4444 6799999999999999998764 1122 2221 111 1233322111111
Q ss_pred ccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCC
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHP 121 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~ 121 (169)
... +++++.++|||||++++.+...+......+.+.+++
T Consensus 133 ~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 133 SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHG 171 (204)
T ss_dssp CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHC
T ss_pred cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCC
Confidence 124 999999999999999999877766666666666654
No 20
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.43 E-value=4.1e-13 Score=106.60 Aligned_cols=100 Identities=10% Similarity=0.141 Sum_probs=68.7
Q ss_pred CCCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc----------------------cccceEEEeC
Q psy13086 16 EKKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS----------------------LYLKKMFFLY 67 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~----------------------~~~d~v~~~f 67 (169)
.++.+|||+|||+| +|... |+..|+|+|+|+.|++.|+++.. .++|.+++.+
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~ 155 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADV 155 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEec
Confidence 44799999999999 66553 77899999999999999987643 3344444333
Q ss_pred CCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe---------CChHHHHHHHHHHhcCCCceec
Q psy13086 68 PDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT---------DVKDLHDWIVSHFTEHPLFVEC 126 (169)
Q Consensus 68 ~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~---------d~~~~~~~~~~~~~~~~~f~~~ 126 (169)
+.|+. ...++++++++|||||.++++. +.+..+....+.+.+. +|+..
T Consensus 156 ~~~~~----------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~-GF~l~ 212 (233)
T 4df3_A 156 AQPEQ----------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDG-GLEIK 212 (233)
T ss_dssp CCTTH----------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHT-TCCEE
T ss_pred cCChh----------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHC-CCEEE
Confidence 32210 2468999999999999999863 2223344344555544 46554
No 21
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.43 E-value=2.6e-13 Score=107.75 Aligned_cols=87 Identities=16% Similarity=0.209 Sum_probs=61.3
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c----ccceEE-----EeCCCCcccccchh---
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L----YLKKMF-----FLYPDPHFKRCKYK--- 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~----~~d~v~-----~~f~d~~f~~~h~~--- 78 (169)
++.+|||||||+| ++.. +..+++|+|+|+.|++.|++++. . .++.+. +.+++..||.....
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 3689999999999 5555 77899999999999999998764 1 122221 22334445532110
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..+....+++++.++|||||.+++.+
T Consensus 125 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 125 YNIGFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred eecCHHHHHHHHHHHcCCCCEEEEEE
Confidence 11123689999999999999999975
No 22
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.43 E-value=4e-13 Score=107.63 Aligned_cols=136 Identities=10% Similarity=-0.012 Sum_probs=78.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c----ccceEEE-----e-CCCCccccc------
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L----YLKKMFF-----L-YPDPHFKRC------ 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~----~~d~v~~-----~-f~d~~f~~~------ 75 (169)
+.+|||||||+| ++.. +.+++|+|+|+.|++.|++++. . .+..+.. . +++..||..
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 578999999999 4444 6799999999999999998754 1 1111110 1 223334421
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceec----CccccccCCCCCCCCCCCCHHHHHH
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVEC----DLEELKRTDPVVDKLYQSTEEGQKV 151 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~----~~~~~~~~~~~~~~~~~~T~ye~~~ 151 (169)
++.. ....++++++++|||||.+++.+.......+.. ... ..+... +... . ....+.......+.+...
T Consensus 147 ~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~l 219 (285)
T 4htf_A 147 EWVA--DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHN-MVA--GNFDYVQAGMPKKK-K-RTLSPDYPRDPTQVYLWL 219 (285)
T ss_dssp GGCS--CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHH-HHT--TCHHHHHTTCCCC------CCCSCCBCHHHHHHHH
T ss_pred hccc--CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHH-HHh--cCHHHHhhhccccc-c-ccCCCCCCCCHHHHHHHH
Confidence 1111 126799999999999999999876554322111 111 001100 0000 0 000012335567778888
Q ss_pred HHcCCCeEEEE
Q psy13086 152 TRNKGEKFCAV 162 (169)
Q Consensus 152 ~~~g~~i~~~~ 162 (169)
.+.|..+-...
T Consensus 220 ~~aGf~v~~~~ 230 (285)
T 4htf_A 220 EEAGWQIMGKT 230 (285)
T ss_dssp HHTTCEEEEEE
T ss_pred HHCCCceeeee
Confidence 88999875543
No 23
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.43 E-value=1.8e-13 Score=107.06 Aligned_cols=86 Identities=17% Similarity=0.105 Sum_probs=55.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc---ccceEE-----E--eCCCCcccccch-----
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL---YLKKMF-----F--LYPDPHFKRCKY----- 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~---~~d~v~-----~--~f~d~~f~~~h~----- 77 (169)
+.+|||||||+| ++.. +..+++|+|+|+.|++.|+++... .+..+. + .+++..||....
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 578999999999 4333 334899999999999999987630 011000 1 233333332211
Q ss_pred -hhhc---ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 78 -KWRI---INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 78 -~~~~---~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.... ....++++++|+|||||.|++.+
T Consensus 140 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred chhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 0000 01367999999999999998753
No 24
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.43 E-value=2.5e-13 Score=105.51 Aligned_cols=78 Identities=12% Similarity=0.117 Sum_probs=52.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----------------------cccceEEEeCCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----------------------LYLKKMFFLYPD 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----------------------~~~d~v~~~f~d 69 (169)
++.+|||||||+| ++...+..+|+|+|+|+.|++.+.++.. +++|.|....+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~~ 136 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIAQ 136 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECCCS
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEeccC
Confidence 3679999999999 5556666799999999987654433221 123333332211
Q ss_pred CcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 70 PHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 70 ~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+ . ....++++++|+|||||.|++..
T Consensus 137 ~-------~---~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 137 K-------N---QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp T-------T---HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred h-------h---HHHHHHHHHHHHhCCCCEEEEEE
Confidence 1 0 01246899999999999999974
No 25
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.43 E-value=1.9e-13 Score=107.38 Aligned_cols=80 Identities=15% Similarity=0.185 Sum_probs=59.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------cccceEEEeCCCCcccccch
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------LYLKKMFFLYPDPHFKRCKY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------~~~d~v~~~f~d~~f~~~h~ 77 (169)
+.+|||||||+| ++..+|..+++|+|+|+.|++.|+++.+ +++|.|..... .|+
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~------l~~ 107 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYANAV------FQW 107 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEEESC------GGG
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEEeCc------hhh
Confidence 678999999999 6666788899999999999999988632 23343333221 122
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
.. ....++++++++|||||.+++.+.
T Consensus 108 ~~--~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 108 VP--DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp ST--THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred CC--CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 11 136799999999999999999863
No 26
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.42 E-value=4.8e-13 Score=107.56 Aligned_cols=87 Identities=16% Similarity=0.250 Sum_probs=61.4
Q ss_pred CCCeEEEEcCccc-----ccCcCCC-CcEEEEeCCHHHHHHHHHHhcc---ccceEE-----EeCCCCcccccc------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPS-TLILGLEIRVKVSDYVIDEWSL---YLKKMF-----FLYPDPHFKRCK------ 76 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~-~~v~GiDis~~~l~~a~~~~~~---~~d~v~-----~~f~d~~f~~~h------ 76 (169)
++.+|||||||+| ++..+|. .+++|+|+|+.|++.|++++.. .+..+. +.++ ..||..+
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLL 100 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhh
Confidence 3689999999999 7777884 8999999999999999987541 111111 1121 2344221
Q ss_pred hhhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 77 YKWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 77 ~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
+.. ....++++++++|||||.+++.+..
T Consensus 101 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 101 HMT--TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GCS--SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCC--CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 111 1268999999999999999988655
No 27
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.42 E-value=2.4e-13 Score=111.32 Aligned_cols=93 Identities=11% Similarity=0.105 Sum_probs=61.3
Q ss_pred CCeEEEEcCccc--ccC--cCCCCcEEEEeCCHHHHHHHHHHhcc-c---------cceEE--E-----------eCCCC
Q psy13086 18 KVEFVDVGCGKL--YLP--MFPSTLILGLEIRVKVSDYVIDEWSL-Y---------LKKMF--F-----------LYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G--la~--~~p~~~v~GiDis~~~l~~a~~~~~~-~---------~d~v~--~-----------~f~d~ 70 (169)
+.+|||||||+| +.. .....+|+|||+|+.||+.|+++... . ++-.. + .+++.
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 578999999999 221 22346899999999999999987541 1 11000 0 13344
Q ss_pred ccccc------chhhh-cccHHHHHHHHHhccCCcEEEEEeCChHHH
Q psy13086 71 HFKRC------KYKWR-IINQNLLSEYAYVLSEGGIVYTITDVKDLH 110 (169)
Q Consensus 71 ~f~~~------h~~~~-~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~ 110 (169)
.||.. |+... .....++++++|+|||||.|++.+......
T Consensus 129 ~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~ 175 (302)
T 2vdw_A 129 KFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKL 175 (302)
T ss_dssp CEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred CeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 55532 22100 012689999999999999999988765443
No 28
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.42 E-value=3.9e-13 Score=105.63 Aligned_cols=87 Identities=14% Similarity=0.258 Sum_probs=60.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cc----cceEE-----EeCCCCcccccchh---
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LY----LKKMF-----FLYPDPHFKRCKYK--- 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~----~d~v~-----~~f~d~~f~~~h~~--- 78 (169)
++.+|||||||+| ++...+. +++|+|+|+.|++.|++++. .. +..+. +.+++..||.....
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAI 124 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChH
Confidence 3679999999999 6666664 99999999999999988754 11 22111 22334445532110
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..+....+++++.++|||||.+++.+
T Consensus 125 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 125 YNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 01123689999999999999999985
No 29
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.42 E-value=7.8e-13 Score=106.09 Aligned_cols=107 Identities=12% Similarity=0.050 Sum_probs=70.8
Q ss_pred CCCeEEEEcCccc-----ccCc-CCCCcEEEEeCCHHHHHHHHHHhc-c-ccceEEEe-------CCCCcccccchhhhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPM-FPSTLILGLEIRVKVSDYVIDEWS-L-YLKKMFFL-------YPDPHFKRCKYKWRI 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~-~p~~~v~GiDis~~~l~~a~~~~~-~-~~d~v~~~-------f~d~~f~~~h~~~~~ 81 (169)
++.+|||+|||+| +++. .|..+++|+|+|+.+++.|++++. . ..+.+.+. +++..||..-... -
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~~~-~ 188 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIADI-P 188 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEECC-S
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEEcC-c
Confidence 3679999999999 5555 678899999999999999988753 1 12222211 1112233211000 0
Q ss_pred ccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCcee
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVE 125 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~ 125 (169)
....+++++.++|||||.+++.+........+.+.+...+ |..
T Consensus 189 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~G-f~~ 231 (275)
T 1yb2_A 189 DPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASG-MHH 231 (275)
T ss_dssp CGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGT-EEE
T ss_pred CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCC-CeE
Confidence 0136899999999999999999887765555666666543 544
No 30
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.42 E-value=4.8e-13 Score=103.03 Aligned_cols=89 Identities=12% Similarity=0.021 Sum_probs=58.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c--------ccceEEEeC-----CCCccccc---
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L--------YLKKMFFLY-----PDPHFKRC--- 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~--------~~d~v~~~f-----~d~~f~~~--- 75 (169)
..+|||||||+| ++...+..+++|+|+|+.|++.|++++. . .++.+.... ++..||..
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 579999999999 6666777899999999999999998753 0 122111111 11223321
Q ss_pred ---chhhhcccHHHHHHHHHhccCCcEEEEEeCCh
Q psy13086 76 ---KYKWRIINQNLLSEYAYVLSEGGIVYTITDVK 107 (169)
Q Consensus 76 ---h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~ 107 (169)
++...-....+++++.++|||||.+++ ++..
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~li~-~~~~ 143 (217)
T 3jwh_A 110 EVIEHLDLSRLGAFERVLFEFAQPKIVIVT-TPNI 143 (217)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEE-EEBH
T ss_pred HHHHcCCHHHHHHHHHHHHHHcCCCEEEEE-ccCc
Confidence 111110125799999999999996655 4443
No 31
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.42 E-value=4.1e-13 Score=106.10 Aligned_cols=84 Identities=15% Similarity=0.170 Sum_probs=59.8
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c--------ccceEEEeCCCCccccc------c
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L--------YLKKMFFLYPDPHFKRC------K 76 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~--------~~d~v~~~f~d~~f~~~------h 76 (169)
+..+|||||||+| ++... .+++|+|+|+.|++.|++++. . ..|...+.+++..||.. |
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhH
Confidence 3679999999999 55554 399999999999999988753 1 11111234555556542 2
Q ss_pred hhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 77 YKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 77 ~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+.. ....++++++|+|||||.|++.+
T Consensus 115 ~~~--d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 115 HFP--NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp GCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcC--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 221 12689999999999999999974
No 32
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.42 E-value=5.4e-13 Score=102.71 Aligned_cols=86 Identities=12% Similarity=0.043 Sum_probs=57.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c--------ccceEEEe-----CCCCccccc---
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L--------YLKKMFFL-----YPDPHFKRC--- 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~--------~~d~v~~~-----f~d~~f~~~--- 75 (169)
..+|||||||+| ++...|..+++|+|+|+.|++.|++++. . .++.+... +++..||..
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 109 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVI 109 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEH
Confidence 579999999999 6677777899999999999999998753 1 22222111 112233321
Q ss_pred ---chhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 76 ---KYKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 76 ---h~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
++...-....++++++++|||||.+++.
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 110 EVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred HHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 1111101147999999999999966543
No 33
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.41 E-value=3.1e-13 Score=106.12 Aligned_cols=84 Identities=12% Similarity=0.039 Sum_probs=58.9
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c----ccceEEE-----eCCCCccccc------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L----YLKKMFF-----LYPDPHFKRC------ 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~----~~d~v~~-----~f~d~~f~~~------ 75 (169)
++.+|||||||+| ++... +.+++|+|+|+.|++.|++++. . .++.+.. .+ +..||..
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~ 113 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGAT 113 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCCh
Confidence 3679999999999 55555 5699999999999999988764 1 1221111 12 3344432
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
|+.. ....++++++|+|||||.+++.+
T Consensus 114 ~~~~--~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 114 WIAG--GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp GGTS--SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred HhcC--CHHHHHHHHHHHcCCCeEEEEec
Confidence 1211 13789999999999999999974
No 34
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.41 E-value=2e-12 Score=102.47 Aligned_cols=99 Identities=12% Similarity=0.081 Sum_probs=68.6
Q ss_pred CCCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-c------------------------ccceEEE
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-L------------------------YLKKMFF 65 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~------------------------~~d~v~~ 65 (169)
+..+|||||||+| ++...| +.+|+|+|+|+.+++.|++++. . ++|.|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 3678999999999 777777 7899999999999999988754 1 3333332
Q ss_pred eCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCCh--------------HHHHHHHHHHhcCCCceec
Q psy13086 66 LYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVK--------------DLHDWIVSHFTEHPLFVEC 126 (169)
Q Consensus 66 ~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~--------------~~~~~~~~~~~~~~~f~~~ 126 (169)
..+ .. ....+++++.++|||||.+++.+-.. .....+.+.+..++.|...
T Consensus 143 d~~---------~~--~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 206 (248)
T 3tfw_A 143 DAD---------KP--NNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTAT 206 (248)
T ss_dssp CSC---------GG--GHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEE
T ss_pred CCc---------hH--HHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEE
Confidence 111 00 12579999999999999998753211 1123344555667777653
No 35
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.41 E-value=7.4e-13 Score=108.52 Aligned_cols=89 Identities=11% Similarity=0.039 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEE------eCCCCcccccchhhhc-c
Q psy13086 16 EKKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFF------LYPDPHFKRCKYKWRI-I 82 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~------~f~d~~f~~~h~~~~~-~ 82 (169)
.++.+|||||||+| +..+.++++|+|||+|+.|++.|+++++ ..++.+.+ .+++..||.....-.. .
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~~~d 200 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAALAEP 200 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTTCSC
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCCccC
Confidence 34789999999998 2234578999999999999999998765 11233322 1233344432110000 1
Q ss_pred cHHHHHHHHHhccCCcEEEEEe
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..++++++.|+|||||+|++.+
T Consensus 201 ~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 201 KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEc
Confidence 2579999999999999999876
No 36
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.40 E-value=1.5e-12 Score=100.02 Aligned_cols=127 Identities=12% Similarity=0.076 Sum_probs=76.5
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----------------cccceEEEeCCCCcccccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----------------LYLKKMFFLYPDPHFKRCK 76 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----------------~~~d~v~~~f~d~~f~~~h 76 (169)
+.+|||||||+| ++.. +.+++|+|+|+.|++.|+++++ +++|.|.+... .|
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~------l~ 117 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVSTYA------FH 117 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEEESC------GG
T ss_pred CCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEECcc------hh
Confidence 678999999999 4443 5799999999999999998753 22333332211 12
Q ss_pred hhhhcccHHHHHHHHHhccCCcEEEEEeC---ChHHHHHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHH
Q psy13086 77 YKWRIINQNLLSEYAYVLSEGGIVYTITD---VKDLHDWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTR 153 (169)
Q Consensus 77 ~~~~~~~~~~l~~~~rvLkpGG~l~i~~d---~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~ 153 (169)
+........++++++++|||||.+++.+. ...........+...+ |......... ....+..+++....+
T Consensus 118 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~l~~ 190 (220)
T 3hnr_A 118 HLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRG-FHQLANDLQT------EYYTRIPVMQTIFEN 190 (220)
T ss_dssp GSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTT-CHHHHHHHHH------SCCCBHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCC-Cccchhhcch------hhcCCHHHHHHHHHH
Confidence 21111113499999999999999999853 2222322333333222 2221111111 112356678888888
Q ss_pred cCCCeE
Q psy13086 154 NKGEKF 159 (169)
Q Consensus 154 ~g~~i~ 159 (169)
.|..+-
T Consensus 191 aGf~v~ 196 (220)
T 3hnr_A 191 NGFHVT 196 (220)
T ss_dssp TTEEEE
T ss_pred CCCEEE
Confidence 998664
No 37
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.40 E-value=3.5e-13 Score=107.25 Aligned_cols=88 Identities=17% Similarity=0.259 Sum_probs=62.3
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEE--------EeCCCCcccccchhh---
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMF--------FLYPDPHFKRCKYKW--- 79 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~--------~~f~d~~f~~~h~~~--- 79 (169)
++.+|||||||+| ++...|+.+++|+|+|+.|++.|++++. ..++.+. +.+++..||......
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLE 116 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhh
Confidence 4689999999999 6677888999999999999999998754 1111111 223444455322110
Q ss_pred hc-ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 80 RI-INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 80 ~~-~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.+ ....++++++++|||||.+++.+
T Consensus 117 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 117 HLQSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 00 12589999999999999999975
No 38
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.40 E-value=3.6e-13 Score=108.73 Aligned_cols=129 Identities=12% Similarity=0.062 Sum_probs=78.2
Q ss_pred CCeEEEEcCccc-c--------cCcCCCCcE--EEEeCCHHHHHHHHHHhc--cccceEEE----------e------CC
Q psy13086 18 KVEFVDVGCGKL-Y--------LPMFPSTLI--LGLEIRVKVSDYVIDEWS--LYLKKMFF----------L------YP 68 (169)
Q Consensus 18 ~~~iLDiGCG~G-l--------a~~~p~~~v--~GiDis~~~l~~a~~~~~--~~~d~v~~----------~------f~ 68 (169)
+.+|||||||+| + +..+|+..+ +|+|+|++|++.|++++. ..++.+.+ . |+
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 568999999999 2 234577754 999999999999998764 12222211 1 34
Q ss_pred CCccccc------chhhhcccHHHHHHHHHhccCCcEEEEEeCCh--HHHHHHHHHHhcCCCceecCccccccCCCCCCC
Q psy13086 69 DPHFKRC------KYKWRIINQNLLSEYAYVLSEGGIVYTITDVK--DLHDWIVSHFTEHPLFVECDLEELKRTDPVVDK 140 (169)
Q Consensus 69 d~~f~~~------h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~--~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 140 (169)
+..||.. |+... ...++++++|+|||||.|++..... .+...........+ ... +..
T Consensus 133 ~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~------~~~-------~~~ 197 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVKD--IPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFP------QDD-------LCQ 197 (292)
T ss_dssp CCCEEEEEEESCGGGCSC--HHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSC------CCT-------TCC
T ss_pred CCceeEEEEeeeeeecCC--HHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhcc------CCC-------ccc
Confidence 5556643 22221 3679999999999999999875322 22221111111111 000 012
Q ss_pred CCCCCHHHHHHHHcCCCeEEE
Q psy13086 141 LYQSTEEGQKVTRNKGEKFCA 161 (169)
Q Consensus 141 ~~~~T~ye~~~~~~g~~i~~~ 161 (169)
..+..+++....+.|..+...
T Consensus 198 ~~~~~~~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 198 YITSDDLTQMLDNLGLKYECY 218 (292)
T ss_dssp CCCHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHCCCceEEE
Confidence 344567788888888877543
No 39
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.40 E-value=3.1e-13 Score=102.51 Aligned_cols=87 Identities=18% Similarity=0.230 Sum_probs=58.4
Q ss_pred CCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc-----------------------cccceEEEeCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS-----------------------LYLKKMFFLYP 68 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~-----------------------~~~d~v~~~f~ 68 (169)
+.+|||+|||+| ++... |..+++|+|+|+.|++.|++++. .++|.|.+..+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 679999999999 55554 66799999999999999987643 23444443321
Q ss_pred C-CcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 69 D-PHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 69 d-~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
- |..+.......-....+++++.++|||||.+++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 103 YLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 1 11110000000012469999999999999999885
No 40
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=1.9e-12 Score=101.28 Aligned_cols=82 Identities=16% Similarity=0.203 Sum_probs=58.1
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c----------------------ccceEEEeCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L----------------------YLKKMFFLYP 68 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~----------------------~~d~v~~~f~ 68 (169)
++.+|||||||+| ++...+ +|+|+|+|+.|++.|+++.. . .+|.|.....
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 3678999999999 666655 89999999999999988653 0 1344443322
Q ss_pred CCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 69 DPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 69 d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
- |+...-....++++++++|||||.+++.+..
T Consensus 134 ~------~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 134 F------HHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp S------TTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred h------hcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 1 1111111258999999999999998887643
No 41
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.39 E-value=2.7e-13 Score=104.46 Aligned_cols=85 Identities=15% Similarity=0.061 Sum_probs=55.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHH----hc-cccceEE--------EeCCCCccccc---
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDE----WS-LYLKKMF--------FLYPDPHFKRC--- 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~----~~-~~~d~v~--------~~f~d~~f~~~--- 75 (169)
++.+|||||||+| ++..+|+.+|+|+|+|+.|++.+.++ .. ..++.+. +.+++.. +..
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 3678999999999 77788899999999999988864322 11 1111111 1122111 110
Q ss_pred --------chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 76 --------KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 76 --------h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
|+.. ....++++++++|||||.+++..
T Consensus 106 ~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 106 MPWGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp SCCHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEe
Confidence 1111 12679999999999999999964
No 42
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.39 E-value=2.5e-13 Score=103.26 Aligned_cols=88 Identities=13% Similarity=0.084 Sum_probs=50.3
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc------------------------cccceEEEeCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS------------------------LYLKKMFFLYP 68 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~------------------------~~~d~v~~~f~ 68 (169)
+.+|||+|||+| ++...|+.+++|+|+|+.|++.|++++. +++|.|....|
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp 110 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSNPP 110 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEECCC
T ss_pred CCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEECCC
Confidence 679999999999 6677788899999999999999876532 35777665322
Q ss_pred CCcccccchhhhc------------------ccHHHHHHHHHhccCCcE-EEEEeC
Q psy13086 69 DPHFKRCKYKWRI------------------INQNLLSEYAYVLSEGGI-VYTITD 105 (169)
Q Consensus 69 d~~f~~~h~~~~~------------------~~~~~l~~~~rvLkpGG~-l~i~~d 105 (169)
--.....++.... ....+++++.++|||||. +++...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 111 YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 1111110000000 016789999999999999 666544
No 43
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.39 E-value=6.3e-13 Score=104.47 Aligned_cols=88 Identities=10% Similarity=0.063 Sum_probs=60.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceE-----EEeCCCCccccc------chhhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKM-----FFLYPDPHFKRC------KYKWR 80 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v-----~~~f~d~~f~~~------h~~~~ 80 (169)
+.+|||||||+| ++...+. +++|+|+|+.|++.|+++.. ..++.+ .+.+++..||.. ++..
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 122 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA- 122 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS-
T ss_pred CCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh-
Confidence 689999999999 4444333 99999999999999998753 111111 122333344421 2211
Q ss_pred cccHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
....++++++++|||||.+++.+..+.
T Consensus 123 -~~~~~l~~~~~~LkpgG~l~~~~~~~~ 149 (253)
T 3g5l_A 123 -SFDDICKKVYINLKSSGSFIFSVEHPV 149 (253)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred -hHHHHHHHHHHHcCCCcEEEEEeCCCc
Confidence 136899999999999999999875543
No 44
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.39 E-value=3.2e-13 Score=108.64 Aligned_cols=39 Identities=10% Similarity=-0.072 Sum_probs=31.9
Q ss_pred CCeEEEEcCccc----ccCcCCCCcEEEEeCCHHHHHHHHHHh
Q psy13086 18 KVEFVDVGCGKL----YLPMFPSTLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 18 ~~~iLDiGCG~G----la~~~p~~~v~GiDis~~~l~~a~~~~ 56 (169)
+.+|||||||+| ++...+..+|+|+|+|+.|++.|++++
T Consensus 72 ~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~ 114 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWL 114 (289)
T ss_dssp CSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHH
T ss_pred CCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHH
Confidence 678999999999 333334579999999999999998753
No 45
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.39 E-value=6.8e-13 Score=101.45 Aligned_cols=81 Identities=15% Similarity=0.096 Sum_probs=58.1
Q ss_pred CCeEEEEcCccc-ccCcCCCC-cEEEEeCCHHHHHHHHHHhc----------------cccceEEEeCCCCcccccchhh
Q psy13086 18 KVEFVDVGCGKL-YLPMFPST-LILGLEIRVKVSDYVIDEWS----------------LYLKKMFFLYPDPHFKRCKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-la~~~p~~-~v~GiDis~~~l~~a~~~~~----------------~~~d~v~~~f~d~~f~~~h~~~ 79 (169)
+.+|||||||+| ++... +. +++|+|+|+.|++.|+++.. +++|.|.+...- |+..
T Consensus 37 ~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l------~~~~ 109 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTL------EFVE 109 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCT------TTCS
T ss_pred CCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChh------hhcC
Confidence 679999999999 33333 45 99999999999999998742 234444332211 1111
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEeCCh
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTITDVK 107 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~d~~ 107 (169)
....++++++++|||||.+++.+...
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 13689999999999999999987543
No 46
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.39 E-value=3.8e-13 Score=108.95 Aligned_cols=41 Identities=15% Similarity=0.306 Sum_probs=36.1
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
++.+|||||||+| ++..++..+|+|||+|+.|++.|++++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~ 91 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIR 91 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence 3678999999999 7778888999999999999999988754
No 47
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.39 E-value=8.2e-13 Score=106.87 Aligned_cols=83 Identities=12% Similarity=0.181 Sum_probs=58.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------cccceEEEe-----C
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------------LYLKKMFFL-----Y 67 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------------------~~~d~v~~~-----f 67 (169)
++.+|||||||+| +++.++ .+|+|+|+|+.|++.|++++. +++|.|... +
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~~~~ 150 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFEHF 150 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGGGT
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchHHhc
Confidence 3679999999999 555655 799999999999999998754 234444332 1
Q ss_pred CCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 68 PDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 68 ~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+||+-.. ..-....+++++.++|||||.+++.+
T Consensus 151 ~d~~~~~----~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 151 ADGAGDA----GFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp TCCSSCC----CTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred Ccccccc----chhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 1211000 00012589999999999999999975
No 48
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.39 E-value=3.9e-12 Score=98.27 Aligned_cols=76 Identities=11% Similarity=0.014 Sum_probs=57.4
Q ss_pred CCCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-c--------------------------ccceE
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-L--------------------------YLKKM 63 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~--------------------------~~d~v 63 (169)
++.+|||||||+| ++...| +.+++|+|+++.+++.|++++. . ++|.|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 3678999999999 777777 7899999999999999987654 1 13433
Q ss_pred EEeCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 64 FFLYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 64 ~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
++..+. . ....+++++.++|||||.+++.
T Consensus 138 ~~d~~~---------~--~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 138 FIDADK---------Q--NNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp EECSCG---------G--GHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEcCCc---------H--HHHHHHHHHHHhcCCCcEEEEe
Confidence 322110 0 1257999999999999988875
No 49
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.39 E-value=6.4e-13 Score=106.13 Aligned_cols=86 Identities=13% Similarity=0.015 Sum_probs=55.9
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc------------------ccceEEE--------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL------------------YLKKMFF-------- 65 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~------------------~~d~v~~-------- 65 (169)
++.+|||||||+| ||.. +.+|+|||+|+.|++.|+++... ....+.+
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4689999999999 4444 56999999999999999865420 0011111
Q ss_pred eCCC-Ccccccc------hhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 66 LYPD-PHFKRCK------YKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 66 ~f~d-~~f~~~h------~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.+++ ..||..- +...-....++++++++|||||+|++.+
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 1221 3344321 1111012579999999999999997654
No 50
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.38 E-value=4.4e-12 Score=98.57 Aligned_cols=84 Identities=19% Similarity=0.230 Sum_probs=57.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceE-----EEeCCCCccccc------chhh
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKM-----FFLYPDPHFKRC------KYKW 79 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v-----~~~f~d~~f~~~------h~~~ 79 (169)
++.+|||||||+| ++.. +.+++|+|+|+.|++.|+++.. ..++.+ .+.+++..||.. |+..
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 3679999999999 4443 5699999999999999987632 111111 122333334421 1111
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
....++++++++|||||.+++.+
T Consensus 131 --~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 131 --EPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHhCCCeEEEEEE
Confidence 12579999999999999999986
No 51
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=9e-13 Score=100.21 Aligned_cols=79 Identities=15% Similarity=0.106 Sum_probs=57.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----------------cccceEEEeCCCCcccccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----------------LYLKKMFFLYPDPHFKRCK 76 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----------------~~~d~v~~~f~d~~f~~~h 76 (169)
+.+|||||||+| ++.. +.+++|+|+|+.|++.|+++.+ +++|.|.+...-.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~------ 113 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLI------ 113 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSST------
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHh------
Confidence 578999999999 4443 5699999999999999998643 3455554432211
Q ss_pred hhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 77 YKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 77 ~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+...-....++++++++|||||.+++.+
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 114 HMGPGELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp TCCTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1111123689999999999999999976
No 52
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.38 E-value=4.9e-13 Score=102.66 Aligned_cols=86 Identities=15% Similarity=0.171 Sum_probs=59.9
Q ss_pred CCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc-cc---cceEE-----EeCCCCccccc------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS-LY---LKKMF-----FLYPDPHFKRC------ 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~-~~---~d~v~-----~~f~d~~f~~~------ 75 (169)
++.+|||||||+| ++... |..+++|+|+|+.|++.|++++. .. +..+. +.+++..||..
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 116 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTF 116 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCG
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhh
Confidence 3679999999999 55554 77899999999999999988754 11 11111 12333334421
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
++.. ....++++++++|||||.+++.+
T Consensus 117 ~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 117 HELS--EPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp GGCS--SHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcC--CHHHHHHHHHHHhCCCeEEEEEE
Confidence 1111 12679999999999999999975
No 53
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.38 E-value=3.5e-13 Score=102.92 Aligned_cols=108 Identities=17% Similarity=0.023 Sum_probs=68.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cc---cceEEEe---CCCCcccccchhhhc-cc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LY---LKKMFFL---YPDPHFKRCKYKWRI-IN 83 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~---~d~v~~~---f~d~~f~~~h~~~~~-~~ 83 (169)
++.+|||||||+| ++. .+..+++|+|+|+.|++.|++++. .. +..+... +++..||......-+ ..
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~~ 138 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEIL 138 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHHH
Confidence 3679999999999 333 466799999999999999998765 11 2211111 122233321110000 02
Q ss_pred HHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceec
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVEC 126 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~ 126 (169)
..+++++.++|||||.+++.+........+...+...+ |+..
T Consensus 139 ~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~G-f~~~ 180 (205)
T 3grz_A 139 LDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENS-FQID 180 (205)
T ss_dssp HHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcC-CceE
Confidence 57899999999999999997654444444555555543 5543
No 54
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.38 E-value=7.6e-13 Score=107.41 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=59.0
Q ss_pred CCCeEEEEcCccc-----cc-CcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEE-----EeCCCCccccc-----
Q psy13086 17 KKVEFVDVGCGKL-----YL-PMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMF-----FLYPDPHFKRC----- 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la-~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~-----~~f~d~~f~~~----- 75 (169)
++.+|||||||+| ++ ...|+.+++|+|+|+.|++.|++++. ..+..+. +.++ ..||..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGL 196 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSS
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECCh
Confidence 3688999999999 44 46788999999999999999998764 1121111 1122 233321
Q ss_pred -chhh-hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 76 -KYKW-RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 76 -h~~~-~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
++.. ......++++++++|||||.+++.+
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 1110 0001348999999999999999975
No 55
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.38 E-value=5e-13 Score=105.03 Aligned_cols=87 Identities=13% Similarity=0.106 Sum_probs=60.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc--ccceEE-----EeCCCCcccc------cchh
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL--YLKKMF-----FLYPDPHFKR------CKYK 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~--~~d~v~-----~~f~d~~f~~------~h~~ 78 (169)
++.+|||||||+| ++..+ +.+++|+|+|+.|++.|++++.. .+..+. +.+++..||. .|+.
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGS
T ss_pred CCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhc
Confidence 3679999999999 55554 67999999999999999987641 111111 1333444543 2222
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..-....++++++++|||||.+++.+
T Consensus 134 ~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 134 SLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 00113679999999999999999975
No 56
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.37 E-value=4.2e-12 Score=97.37 Aligned_cols=137 Identities=9% Similarity=0.067 Sum_probs=83.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----cccceEEEeCCCCccccc------chhhhcc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----LYLKKMFFLYPDPHFKRC------KYKWRII 82 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----~~~d~v~~~f~d~~f~~~------h~~~~~~ 82 (169)
+.+|||||||+| ++.. + .+++|+|+|+.|++.|+++.. ..+......+++..||.. ++...
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~-- 108 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFD-- 108 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSC--
T ss_pred CCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcCC--
Confidence 679999999999 4555 4 799999999999999987643 111111122333334321 12111
Q ss_pred cHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHHcCCCeEEEE
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTRNKGEKFCAV 162 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~g~~i~~~~ 162 (169)
...++++++++|||||.+++.++...........+. ..+....... ..+.+....+..+++....+.|..+....
T Consensus 109 ~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 183 (230)
T 3cc8_A 109 PWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLA--GNWTYTEYGL---LDKTHIRFFTFNEMLRMFLKAGYSISKVD 183 (230)
T ss_dssp HHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHT--TCCCCBSSST---TBTTCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhc--CCceeccCCC---CCcceEEEecHHHHHHHHHHcCCeEEEEE
Confidence 257999999999999999998765543333333222 1222111110 11112244667778888888898875544
Q ss_pred E
Q psy13086 163 F 163 (169)
Q Consensus 163 ~ 163 (169)
.
T Consensus 184 ~ 184 (230)
T 3cc8_A 184 R 184 (230)
T ss_dssp E
T ss_pred e
Confidence 3
No 57
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.37 E-value=6.1e-13 Score=101.38 Aligned_cols=132 Identities=12% Similarity=0.086 Sum_probs=78.8
Q ss_pred CeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c----ccceEE-----EeCCCCccccc------ch
Q psy13086 19 VEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L----YLKKMF-----FLYPDPHFKRC------KY 77 (169)
Q Consensus 19 ~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~----~~d~v~-----~~f~d~~f~~~------h~ 77 (169)
.+|||||||+| ++.. ++.+++|+|+|+.|++.|++++. . .+..+. +.+++..||.. |+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 48999999999 5555 77899999999999999998754 1 111111 22334444431 22
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEeCCh--HHHHHHHHHHh-cCCCceecCccccccCCCCCCCCCCCCHHHHHHHHc
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTITDVK--DLHDWIVSHFT-EHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTRN 154 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~--~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~ 154 (169)
.. ....++++++++|||||.+++.+... .........+. ..+.|....... ....+..+++....+.
T Consensus 124 ~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~a 193 (219)
T 3dlc_A 124 WE--DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKN--------ISQENVERFQNVLDEI 193 (219)
T ss_dssp CS--CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHH--------SSHHHHHHHHHHHHHH
T ss_pred cc--CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhc--------cccCCHHHHHHHHHHc
Confidence 11 13679999999999999999986432 22222222222 122222110000 1113456778888888
Q ss_pred CCCeEEE
Q psy13086 155 KGEKFCA 161 (169)
Q Consensus 155 g~~i~~~ 161 (169)
|..+..+
T Consensus 194 Gf~~v~~ 200 (219)
T 3dlc_A 194 GISSYEI 200 (219)
T ss_dssp TCSSEEE
T ss_pred CCCeEEE
Confidence 8876433
No 58
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.37 E-value=1.3e-12 Score=103.65 Aligned_cols=85 Identities=20% Similarity=0.215 Sum_probs=59.8
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEE-----EeCCCCccccc------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMF-----FLYPDPHFKRC------ 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~-----~~f~d~~f~~~------ 75 (169)
++.+|||||||+| +++.. +.+++|+|+|+.|++.|++++. ..+..+. +.+++..||..
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESL 139 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechh
Confidence 4679999999999 44444 5799999999999999988754 1121111 23344445532
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
++... ...++++++++|||||.+++.+
T Consensus 140 ~~~~~--~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 140 HHMPD--RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp TTSSC--HHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhCCC--HHHHHHHHHHHcCCCeEEEEEE
Confidence 22111 2689999999999999999875
No 59
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.37 E-value=6.2e-13 Score=105.54 Aligned_cols=89 Identities=18% Similarity=0.253 Sum_probs=61.5
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----cccceEEEeCCCCcccccchhhhcccHHHHH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----LYLKKMFFLYPDPHFKRCKYKWRIINQNLLS 88 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~ 88 (169)
+.+|||||||+| ++...|+.+++|+|+|+.|++.|+++.. ...|...+.+++..||..... ....+++
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~---~~~~~l~ 162 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRI---YAPCKAE 162 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEE---SCCCCHH
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEe---CChhhHH
Confidence 678999999999 5566677899999999999999988753 000100122333334432211 1134689
Q ss_pred HHHHhccCCcEEEEEeCChHH
Q psy13086 89 EYAYVLSEGGIVYTITDVKDL 109 (169)
Q Consensus 89 ~~~rvLkpGG~l~i~~d~~~~ 109 (169)
++.++|||||.+++.++....
T Consensus 163 ~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 163 ELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp HHHHHEEEEEEEEEEEECTTT
T ss_pred HHHHhcCCCcEEEEEEcCHHH
Confidence 999999999999999866544
No 60
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.37 E-value=1.5e-12 Score=101.93 Aligned_cols=84 Identities=15% Similarity=0.207 Sum_probs=58.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c---ccceE-----EEeCCCCccccc------c
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L---YLKKM-----FFLYPDPHFKRC------K 76 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~---~~d~v-----~~~f~d~~f~~~------h 76 (169)
++.+|||||||+| ++... .+++|+|+|+.|++.|++++. . .+..+ .+.+++..||.. |
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~ 98 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAH 98 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGG
T ss_pred CCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchh
Confidence 4689999999999 55554 489999999999999988753 1 11111 123444445532 2
Q ss_pred hhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 77 YKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 77 ~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+.. ....++++++++|||||.+++.+
T Consensus 99 ~~~--~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 99 HFS--DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp GCS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcc--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 211 13689999999999999999974
No 61
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.36 E-value=4.3e-13 Score=107.89 Aligned_cols=85 Identities=15% Similarity=0.112 Sum_probs=59.8
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEE-----EeCCCCccccc------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMF-----FLYPDPHFKRC------ 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~-----~~f~d~~f~~~------ 75 (169)
++.+|||||||+| ++..+ +.+++|+|+|+.|++.|++++. ..+..+. +.+++..||..
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 160 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAF 160 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchh
Confidence 4679999999999 44444 4699999999999999988753 1121111 23444455532
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
++... ...++++++|+|||||.+++.+
T Consensus 161 ~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 161 LHSPD--KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp GGCSC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcCC--HHHHHHHHHHHcCCCeEEEEEE
Confidence 22111 2689999999999999999975
No 62
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.36 E-value=1.8e-12 Score=101.42 Aligned_cols=86 Identities=12% Similarity=-0.048 Sum_probs=57.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccc----cceEE-----EeCCCCccccc------ch
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLY----LKKMF-----FLYPDPHFKRC------KY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~----~d~v~-----~~f~d~~f~~~------h~ 77 (169)
..+|||||||+| ++... ..+++|+|+|+.|++.|++++... ++.+. +.+++..||.. ++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 679999999999 44544 469999999999999999876411 11111 11222234421 11
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
...-....+++++.++|||||.+++.+
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 111012479999999999999999975
No 63
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.36 E-value=2e-12 Score=101.56 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=60.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEE--------eCC---CCcccccchhhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFF--------LYP---DPHFKRCKYKWR 80 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~--------~f~---d~~f~~~h~~~~ 80 (169)
+.+|||||||+| ++...|+.+|+|||+|+.|++.|++++. ..++.+.+ .++ +..||......-
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~ 150 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV 150 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc
Confidence 679999999999 5555788999999999999999988764 11222221 111 234443211110
Q ss_pred cccHHHHHHHHHhccCCcEEEEEe
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.....+++++.++|||||.+++..
T Consensus 151 ~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 151 ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 113689999999999999999874
No 64
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.36 E-value=1.8e-12 Score=101.89 Aligned_cols=83 Identities=14% Similarity=0.173 Sum_probs=57.6
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---cccceE-----EEeCCCCccccc------ch
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---LYLKKM-----FFLYPDPHFKRC------KY 77 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---~~~d~v-----~~~f~d~~f~~~------h~ 77 (169)
++.+|||||||+| ++.. ..+++|+|+|+.|++.|++++. ..+..+ .+.+++..||.. |+
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 3679999999999 4444 5799999999999999998752 111111 122333344432 22
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.. ....++++++++|||||.+++.
T Consensus 117 ~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 VP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred cC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 21 1368999999999999999987
No 65
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.36 E-value=9e-13 Score=101.14 Aligned_cols=88 Identities=9% Similarity=0.042 Sum_probs=57.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--cccceEEEeC----CCCcccc------cchhhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--LYLKKMFFLY----PDPHFKR------CKYKWR 80 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--~~~d~v~~~f----~d~~f~~------~h~~~~ 80 (169)
..+|||||||+| ++... .+++|+|+|+.|++.|++++. ..+..+...+ ++..||. .|+...
T Consensus 52 ~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 129 (216)
T 3ofk_A 52 VSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYYLED 129 (216)
T ss_dssp EEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGGSSS
T ss_pred CCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHhCCC
Confidence 578999999999 44443 589999999999999998764 1111111111 1222332 111111
Q ss_pred -cccHHHHHHHHHhccCCcEEEEEeCCh
Q psy13086 81 -IINQNLLSEYAYVLSEGGIVYTITDVK 107 (169)
Q Consensus 81 -~~~~~~l~~~~rvLkpGG~l~i~~d~~ 107 (169)
-....++++++++|||||.+++.+...
T Consensus 130 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 130 MTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 001468999999999999999987544
No 66
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.36 E-value=1.9e-12 Score=100.83 Aligned_cols=85 Identities=15% Similarity=0.149 Sum_probs=55.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc--ccceEEE---eC----CCCccccc------ch
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL--YLKKMFF---LY----PDPHFKRC------KY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~--~~d~v~~---~f----~d~~f~~~------h~ 77 (169)
..+|||||||+| ++. +..+|+|+|+|+.|++.|++++.. ..+.+.+ .+ ++..||.. ++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 458999999999 333 567999999999999999987641 1111111 11 11123321 11
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
...-....++++++++|||||.+++.+
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 111113679999999999999999865
No 67
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.35 E-value=1.7e-12 Score=103.36 Aligned_cols=87 Identities=17% Similarity=0.109 Sum_probs=61.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEEe------CC-----CCcccccchhhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFL------YP-----DPHFKRCKYKWR 80 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~------f~-----d~~f~~~h~~~~ 80 (169)
+.+|||||||+| ++..+|+.+|+|||+|+.|++.|++++. ..++.+.+. ++ +..||..-...-
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~ 160 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV 160 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc
Confidence 678999999999 6777899999999999999999998765 222222221 11 134543221100
Q ss_pred cccHHHHHHHHHhccCCcEEEEEe
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.....+++.+.++|||||++++..
T Consensus 161 ~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 161 APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 012689999999999999998865
No 68
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.35 E-value=1.2e-12 Score=100.22 Aligned_cols=79 Identities=13% Similarity=0.063 Sum_probs=56.8
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------cccceEEEeCCCCcccccchh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------LYLKKMFFLYPDPHFKRCKYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------~~~d~v~~~f~d~~f~~~h~~ 78 (169)
+.+|||||||+| ++.. +.+++|+|+|+.|++.|++++. +++|.|..... .++.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~------l~~~ 115 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHAC------LLHV 115 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSC------GGGS
T ss_pred CCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCc------hhhc
Confidence 679999999999 3333 5699999999999999998743 33444433211 1111
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..-....++++++++|||||.+++.+
T Consensus 116 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 116 PRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 10012579999999999999999975
No 69
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.35 E-value=7.3e-12 Score=93.34 Aligned_cols=103 Identities=14% Similarity=0.063 Sum_probs=67.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEe-------CCC-Ccccccchhhh-
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL-KKMFFL-------YPD-PHFKRCKYKWR- 80 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~-------f~d-~~f~~~h~~~~- 80 (169)
++.+|||+|||+| ++... .+++|+|+|+.+++.|++++. ..+ +.+.+. +++ ..||..-....
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 110 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSG 110 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCch
Confidence 3679999999999 44544 799999999999999988653 111 111110 111 12221100000
Q ss_pred cccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCC
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHP 121 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~ 121 (169)
-....+++++.++|+|||.+++.+..........+.+..++
T Consensus 111 ~~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g 151 (192)
T 1l3i_A 111 GELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLG 151 (192)
T ss_dssp TCHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCC
Confidence 01268999999999999999998877666666666666654
No 70
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.6e-12 Score=105.05 Aligned_cols=83 Identities=14% Similarity=0.145 Sum_probs=59.4
Q ss_pred CCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhcc------ccceEE-----EeCCC------Ccccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWSL------YLKKMF-----FLYPD------PHFKR 74 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~~------~~d~v~-----~~f~d------~~f~~ 74 (169)
+.+|||||||+| ++..+ +..+|+|+|+|+.|++.|++++.. .+..+. +.+++ ..||.
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 116 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDM 116 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeE
Confidence 689999999999 66554 788999999999999999886431 111111 12233 23442
Q ss_pred ------cchhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 75 ------CKYKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 75 ------~h~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.|+. ....++++++++|||||.|++.
T Consensus 117 V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 117 ITAVECAHWF---DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEE
Confidence 2222 2478999999999999999883
No 71
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.34 E-value=3.2e-12 Score=97.83 Aligned_cols=79 Identities=18% Similarity=0.121 Sum_probs=58.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------cccceEEEeCCCCccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------------LYLKKMFFLYPDPHFK 73 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------------------~~~d~v~~~f~d~~f~ 73 (169)
+.+|||||||+| ++.. +.+++|+|+|+.|++.|+++.. .++|.|.+...-..
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~~-- 128 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALLH-- 128 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCCS--
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhhh--
Confidence 578999999999 4444 5699999999999999987621 23555544322110
Q ss_pred ccchhhhcccHHHHHHHHHhccCCcEEEEEeCCh
Q psy13086 74 RCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVK 107 (169)
Q Consensus 74 ~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~ 107 (169)
-....++++++++|||||.+++.+..+
T Consensus 129 -------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 129 -------QDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp -------SCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -------hhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 013689999999999999999987544
No 72
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.34 E-value=3.1e-12 Score=99.12 Aligned_cols=104 Identities=15% Similarity=0.062 Sum_probs=65.8
Q ss_pred CCCeEEEEcCc-cc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCC
Q psy13086 17 KKVEFVDVGCG-KL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPD 69 (169)
Q Consensus 17 ~~~~iLDiGCG-~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d 69 (169)
++.+||||||| +| ++... ..+|+|+|+|+.|++.|++++. +++|.|....|-
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 46899999999 99 44443 6799999999999999998753 233444322110
Q ss_pred Ccccc--cc-hhhh--------cccHHHHHHHHHhccCCcEEEEEeCC-hHHHHHHHHHHhcCC
Q psy13086 70 PHFKR--CK-YKWR--------IINQNLLSEYAYVLSEGGIVYTITDV-KDLHDWIVSHFTEHP 121 (169)
Q Consensus 70 ~~f~~--~h-~~~~--------~~~~~~l~~~~rvLkpGG~l~i~~d~-~~~~~~~~~~~~~~~ 121 (169)
-+... .. .... -....+++++.++|||||.+++.+.. ......+.+.+..++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g 197 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLG 197 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTT
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcC
Confidence 00000 00 0000 00267999999999999999997643 344455566666554
No 73
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.34 E-value=2e-12 Score=100.97 Aligned_cols=86 Identities=8% Similarity=0.091 Sum_probs=57.8
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEE---eCCC--------Cccccc-chhh
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFF---LYPD--------PHFKRC-KYKW 79 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~---~f~d--------~~f~~~-h~~~ 79 (169)
++.+|||||||+| ++...+..+|+|+|+|+.|++.|++++... +.+.. ...+ ..||.. |...
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIVEKVDVIYEDVA 152 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTSCCEEEEEECCC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccCccEEEEEEecC
Confidence 3678999999999 666767779999999999999998876411 11111 1111 123321 1110
Q ss_pred hc-ccHHHHHHHHHhccCCcEEEEE
Q psy13086 80 RI-INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 80 ~~-~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.. ....+++++.++|||||.+++.
T Consensus 153 ~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 153 QPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 00 0156799999999999999995
No 74
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.34 E-value=2.5e-12 Score=108.23 Aligned_cols=98 Identities=15% Similarity=0.204 Sum_probs=66.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----------------------cccceEEEeCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----------------------LYLKKMFFLYPD 69 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----------------------~~~d~v~~~f~d 69 (169)
+.+|||+|||+| ++..+|..+|+|+|+|+.|++.|++++. +++|.|.+ +
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~---n 299 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC---N 299 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEE---C
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEE---C
Confidence 478999999999 7778899999999999999999988654 12333322 1
Q ss_pred CcccccchhhhcccHHHHHHHHHhccCCcEEEEEeC-ChHHHHHHHHHHh
Q psy13086 70 PHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITD-VKDLHDWIVSHFT 118 (169)
Q Consensus 70 ~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d-~~~~~~~~~~~~~ 118 (169)
|-|........-....+++++.++|||||.++++.. ...|..++.+.+.
T Consensus 300 ppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 300 PPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp CCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred CCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 111100011111124689999999999999999764 3446666666554
No 75
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.34 E-value=3.2e-12 Score=102.42 Aligned_cols=94 Identities=18% Similarity=0.235 Sum_probs=69.2
Q ss_pred CCeEEEEcCccc-----ccCc-CCCCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPM-FPSTLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~-~p~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~ 70 (169)
+.+|||+|||+| ++.. .|..+++|+|+|+.+++.|++++. .++|.|.+..+++
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~~~~ 192 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVPDP 192 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECCSCG
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECCcCH
Confidence 579999999999 5555 577899999999999999988753 1233333322222
Q ss_pred cccccchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCcee
Q psy13086 71 HFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVE 125 (169)
Q Consensus 71 ~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~ 125 (169)
..+++++.++|+|||.+++.+........+.+.+.+. +|..
T Consensus 193 -------------~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~-gf~~ 233 (277)
T 1o54_A 193 -------------WNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQEL-PFIR 233 (277)
T ss_dssp -------------GGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHS-SEEE
T ss_pred -------------HHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHC-CCce
Confidence 3689999999999999999987765555566666653 4543
No 76
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.34 E-value=6.1e-13 Score=106.08 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=30.6
Q ss_pred CCeEEEEcCccc-ccC--cCCC-CcEEEEeCCHHHHHHHHHHh
Q psy13086 18 KVEFVDVGCGKL-YLP--MFPS-TLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 18 ~~~iLDiGCG~G-la~--~~p~-~~v~GiDis~~~l~~a~~~~ 56 (169)
+.+|||||||+| ++. ..+. .+|+|+|+|+.|++.|++++
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~ 98 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWL 98 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHH
T ss_pred CceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHH
Confidence 578999999999 221 2233 37999999999999998764
No 77
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.34 E-value=2e-12 Score=100.26 Aligned_cols=108 Identities=14% Similarity=0.102 Sum_probs=63.5
Q ss_pred CCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEe----------CCC----Cccccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS-LYL-KKMFFL----------YPD----PHFKRC 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~----------f~d----~~f~~~ 75 (169)
..+|||||||+| ++... ++.+|+|||+|+.|++.|++++. ..+ +.+.+. +++ ..||..
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 578999999999 66655 47899999999999999998754 111 111111 010 123321
Q ss_pred c---hhhhc-ccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceec
Q psy13086 76 K---YKWRI-INQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVEC 126 (169)
Q Consensus 76 h---~~~~~-~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~ 126 (169)
. ..... ....+++.+ ++|||||.+++.+-...-.....+.+..++.|...
T Consensus 139 ~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~ 192 (221)
T 3u81_A 139 FLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECT 192 (221)
T ss_dssp EECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEEEE
T ss_pred EEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCCceEE
Confidence 0 00000 012467777 99999999987532211112234455667776654
No 78
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=1.7e-11 Score=90.85 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=69.3
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEE-------eCCCCcccccchhhhccc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFF-------LYPDPHFKRCKYKWRIIN 83 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~-------~f~d~~f~~~h~~~~~~~ 83 (169)
++.+|||||||+| ++. +..+++|+|+|+.|++.|++++. ..++.+.+ .+++..||.......-..
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~~~~ 112 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGTKNI 112 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSCSCH
T ss_pred CCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCcccH
Confidence 3679999999999 444 77899999999999999998753 11111111 111112221110000113
Q ss_pred HHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCcee
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVE 125 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~ 125 (169)
..+++++.++ |||.+++.+..........+.+.+++ |..
T Consensus 113 ~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g-~~~ 151 (183)
T 2yxd_A 113 EKIIEILDKK--KINHIVANTIVLENAAKIINEFESRG-YNV 151 (183)
T ss_dssp HHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTT-CEE
T ss_pred HHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcC-CeE
Confidence 6799999998 99999999877777777778888776 443
No 79
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.34 E-value=4.1e-12 Score=96.00 Aligned_cols=81 Identities=10% Similarity=0.032 Sum_probs=56.3
Q ss_pred CCeEEEEcCccc---c-cCcCCCCcEEEEeCCHHHHHHHHHHhc-----------------------cccceEEEeCCCC
Q psy13086 18 KVEFVDVGCGKL---Y-LPMFPSTLILGLEIRVKVSDYVIDEWS-----------------------LYLKKMFFLYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G---l-a~~~p~~~v~GiDis~~~l~~a~~~~~-----------------------~~~d~v~~~f~d~ 70 (169)
+.+|||+|||+| + +...+..+|+|+|+|+.|++.|++++. .++|.|.+..|
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p-- 122 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP-- 122 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC--
T ss_pred CCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC--
Confidence 678999999999 2 223355689999999999999998754 22333332211
Q ss_pred cccccchhhhcccHHHHHHHHH--hccCCcEEEEEeC
Q psy13086 71 HFKRCKYKWRIINQNLLSEYAY--VLSEGGIVYTITD 105 (169)
Q Consensus 71 ~f~~~h~~~~~~~~~~l~~~~r--vLkpGG~l~i~~d 105 (169)
+ ++.. -....+++++.+ +|||||.+++.+.
T Consensus 123 -~---~~~~-~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 123 -Y---NVDS-ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp -T---TSCH-HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred -C---Ccch-hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 1 1100 013578999999 9999999999763
No 80
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.33 E-value=5.3e-12 Score=94.26 Aligned_cols=100 Identities=11% Similarity=0.173 Sum_probs=65.0
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cc-----cceEEEeC----CCCccccc------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LY-----LKKMFFLY----PDPHFKRC------ 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~-----~d~v~~~f----~d~~f~~~------ 75 (169)
++.+|||||||+| ++.. ..+++|+|+|+.|++.|++++. .. +..+.... ++..||..
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 129 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPI 129 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECCCc
Confidence 3679999999999 4444 6799999999999999988754 11 22211111 11122211
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhc
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTE 119 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~ 119 (169)
|+.. -....+++++.++|||||.+++.+........+.+.+.+
T Consensus 130 ~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~ 172 (194)
T 1dus_A 130 RAGK-EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKD 172 (194)
T ss_dssp TTCH-HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHH
T ss_pred ccch-hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHH
Confidence 1100 012579999999999999999998766554444444444
No 81
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.33 E-value=1.6e-12 Score=105.88 Aligned_cols=87 Identities=21% Similarity=0.250 Sum_probs=60.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c----ccceEE-----EeCCCCcccccchh---
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L----YLKKMF-----FLYPDPHFKRCKYK--- 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~----~~d~v~-----~~f~d~~f~~~h~~--- 78 (169)
++.+|||||||+| +++.+ +.+|+|+|+|+.|++.|++++. . .++.+. +.+++..||.....
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 3689999999999 55543 5799999999999999998754 1 122211 22344455532110
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..+....+++++.++|||||.+++.+
T Consensus 196 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 196 MYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp GGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 01114789999999999999999986
No 82
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.33 E-value=3.5e-12 Score=101.74 Aligned_cols=107 Identities=15% Similarity=0.190 Sum_probs=69.8
Q ss_pred CCCeEEEEcCccc-----ccCc-CCCCcEEEEeCCHHHHHHHHHHhccc----cceEEE--------eCCCCcccccchh
Q psy13086 17 KKVEFVDVGCGKL-----YLPM-FPSTLILGLEIRVKVSDYVIDEWSLY----LKKMFF--------LYPDPHFKRCKYK 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~-~p~~~v~GiDis~~~l~~a~~~~~~~----~d~v~~--------~f~d~~f~~~h~~ 78 (169)
++.+|||+|||+| ++.. .|..+++|+|+|+.+++.|++++... .+.+.+ .+++..||..-..
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~ 178 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLD 178 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEEC
Confidence 3679999999999 5553 46789999999999999998765311 122221 1122223321100
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCce
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFV 124 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~ 124 (169)
- .....+++++.++|||||.+++.+...+....+...+..+..|.
T Consensus 179 ~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 179 M-LAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp S-SCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred C-cCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 0 00136899999999999999999887766665666666534443
No 83
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.33 E-value=3.8e-12 Score=96.64 Aligned_cols=87 Identities=8% Similarity=-0.048 Sum_probs=56.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c--ccceE-----EEeCCCCcccccch----hh
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L--YLKKM-----FFLYPDPHFKRCKY----KW 79 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~--~~d~v-----~~~f~d~~f~~~h~----~~ 79 (169)
++ +|||||||+| ++.. +.+++|+|+|+.|++.|++++. . .+..+ .+.+++..||.... ..
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 106 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLP 106 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCC
T ss_pred CC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCC
Confidence 35 9999999999 4443 5699999999999999988753 0 01100 01122223332110 00
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
.-....+++++.++|||||.+++.+..
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~ 133 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFA 133 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 001367999999999999999998643
No 84
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.33 E-value=2.3e-12 Score=101.96 Aligned_cols=79 Identities=14% Similarity=0.133 Sum_probs=55.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------cccceEEEeCCCCcccccch
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------LYLKKMFFLYPDPHFKRCKY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------~~~d~v~~~f~d~~f~~~h~ 77 (169)
+.+|||||||+| ++.. ..+++|+|+|+.|++.|+++.+ +++|.|.+.+. ..++
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~-----~l~~ 123 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS--FGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFS-----SIGH 123 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT--SSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTT-----GGGG
T ss_pred CCcEEEeCCcCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCc-----hhhh
Confidence 579999999999 4444 3589999999999999998753 23444433220 1111
Q ss_pred hhh-cccHHHHHHHHHhccCCcEEEEE
Q psy13086 78 KWR-IINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 78 ~~~-~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
... -....++++++++|||||.|++.
T Consensus 124 ~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 124 LAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp SCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 100 01257899999999999999985
No 85
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.33 E-value=2.7e-12 Score=98.90 Aligned_cols=142 Identities=15% Similarity=0.115 Sum_probs=80.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cc--------cceEE-----EeCCCCccccc--
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LY--------LKKMF-----FLYPDPHFKRC-- 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~--------~d~v~-----~~f~d~~f~~~-- 75 (169)
++.+|||||||+| ++.. +.+++|+|+|+.|++.|++++. .. ++.+. +.+++..||..
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 4689999999999 4444 5799999999999999998764 11 11111 12233344421
Q ss_pred ----chhhhc-ccHHHHHHHHHhccCCcEEEEEeCC-----hHHHHHHHHHHhc---CCCceecCccccccCCCCCCCCC
Q psy13086 76 ----KYKWRI-INQNLLSEYAYVLSEGGIVYTITDV-----KDLHDWIVSHFTE---HPLFVECDLEELKRTDPVVDKLY 142 (169)
Q Consensus 76 ----h~~~~~-~~~~~l~~~~rvLkpGG~l~i~~d~-----~~~~~~~~~~~~~---~~~f~~~~~~~~~~~~~~~~~~~ 142 (169)
++.... ....++++++++|||||.+++.+.. ..+.......+.. ...|........ ..+.....+
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 185 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETG--ETEFIAHHF 185 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTC--CEEEEEECB
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccC--CcceeeEeC
Confidence 111000 0127999999999999999998532 1222222222111 111111100000 001111345
Q ss_pred CCCHHHHHHHHcCCCeEEEE
Q psy13086 143 QSTEEGQKVTRNKGEKFCAV 162 (169)
Q Consensus 143 ~~T~ye~~~~~~g~~i~~~~ 162 (169)
...+++....+.|..+-.+.
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEE
Confidence 67788888888998886554
No 86
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.33 E-value=2.7e-12 Score=94.97 Aligned_cols=78 Identities=26% Similarity=0.289 Sum_probs=56.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------cccceEEEeCCCCcccccchh
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------LYLKKMFFLYPDPHFKRCKYK 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------------~~~d~v~~~f~d~~f~~~h~~ 78 (169)
++.+|||||||+| ++... .+++|+|+|+.|++.|+++.+ +++|.|.+...-. +.
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~v~~~~~d~~~~~~~~D~v~~~~~l~------~~ 88 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKFDSVITLSDPKEIPDNSVDFILFANSFH------DM 88 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHCTTSEEESSGGGSCTTCEEEEEEESCST------TC
T ss_pred CCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhCCCcEEEeCCCCCCCCceEEEEEccchh------cc
Confidence 3578999999999 44444 399999999999999988632 2344443322211 11
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
. ....+++++.++|||||.+++.+
T Consensus 89 ~--~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 89 D--DKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c--CHHHHHHHHHHhcCCCCEEEEEE
Confidence 1 12579999999999999999975
No 87
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.33 E-value=4.7e-12 Score=103.40 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=59.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------------cccceEEE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------------LYLKKMFF 65 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------------~~~d~v~~ 65 (169)
..+|||||||+| +++..+..+|++||+|+.|++.|+++++ +++|.|.+
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 578999999999 5566667899999999999999987542 24555555
Q ss_pred eCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 66 LYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 66 ~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..++|.-. ...+...+++++++++|||||.+++.+
T Consensus 164 D~~~p~~~----~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 164 DCTDPIGP----GESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CC--------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCccCc----chhccHHHHHHHHHHhcCCCCEEEEec
Confidence 44444211 112334789999999999999999975
No 88
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.33 E-value=3.6e-12 Score=101.97 Aligned_cols=87 Identities=15% Similarity=0.169 Sum_probs=57.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--c---ccceEEE---eCCCCccccc------ch
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--L---YLKKMFF---LYPDPHFKRC------KY 77 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--~---~~d~v~~---~f~d~~f~~~------h~ 77 (169)
++.+|||||||+| +++.+ +.+++|+|+|+.|++.|++++. + .++.+.. .++ ..||.. ++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~fD~v~~~~~l~~ 141 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-EPVDRIVSIGAFEH 141 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-CCCSEEEEESCGGG
T ss_pred CcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-CCeeEEEEeCchhh
Confidence 4679999999999 45444 3599999999999999998754 0 1111111 111 233321 12
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
...-....++++++++|||||.+++.+.
T Consensus 142 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 142 FGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp TCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 1101136899999999999999999753
No 89
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.33 E-value=5.6e-12 Score=99.03 Aligned_cols=107 Identities=11% Similarity=0.028 Sum_probs=70.9
Q ss_pred CCCeEEEEcCccc-----ccCc-CCCCcEEEEeCCHHHHHHHHHHhcc--ccceEEE--------eCCCCcccccchhhh
Q psy13086 17 KKVEFVDVGCGKL-----YLPM-FPSTLILGLEIRVKVSDYVIDEWSL--YLKKMFF--------LYPDPHFKRCKYKWR 80 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~-~p~~~v~GiDis~~~l~~a~~~~~~--~~d~v~~--------~f~d~~f~~~h~~~~ 80 (169)
++.+|||+|||+| ++.. .|..+++|+|+|+.+++.|++++.. ..+.+.+ .+++..||..-....
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 175 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDLM 175 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEESS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECCc
Confidence 3679999999999 5555 5678999999999999999887531 1122211 122222332110000
Q ss_pred cccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCcee
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVE 125 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~ 125 (169)
....+++++.++|||||.+++.+........+.+.+.++ +|..
T Consensus 176 -~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-gf~~ 218 (258)
T 2pwy_A 176 -EPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAH-PFRL 218 (258)
T ss_dssp -CGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTT-TEEE
T ss_pred -CHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC-CCce
Confidence 013689999999999999999988776555566666654 4543
No 90
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.32 E-value=3.4e-12 Score=96.15 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=55.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c---ccceEE-----EeCCCCcccc------cch
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L---YLKKMF-----FLYPDPHFKR------CKY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~---~~d~v~-----~~f~d~~f~~------~h~ 77 (169)
+.+|||||||+| ++.. +.+++|+|+|+.|++.|++++. . .+..+. +.+ +..||. .|+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 579999999999 4443 5699999999999999987653 1 111111 111 223332 122
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
...-....+++++.++|||||.+++.+
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 111123679999999999999988764
No 91
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.32 E-value=3.9e-12 Score=99.63 Aligned_cols=85 Identities=11% Similarity=0.191 Sum_probs=57.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEeC-------C---CCcccccchhh-
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL-KKMFFLY-------P---DPHFKRCKYKW- 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~f-------~---d~~f~~~h~~~- 79 (169)
..+|||||||+| ++...|..+|+|+|+|+.|++.|++++. ..+ +.+.+.. + +..||......
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 678999999999 7777788999999999999999998764 111 1121110 1 12233211000
Q ss_pred hcccHHHHHHHHHhccCCcEEEE
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYT 102 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i 102 (169)
.-....+++++.++|||||.|++
T Consensus 152 ~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 152 KAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp SSSHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEE
Confidence 00126799999999999999987
No 92
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.32 E-value=2.7e-12 Score=99.65 Aligned_cols=88 Identities=20% Similarity=0.191 Sum_probs=59.3
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc-ccceEE-----EeCCCCccccc------chhhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL-YLKKMF-----FLYPDPHFKRC------KYKWR 80 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~-~~d~v~-----~~f~d~~f~~~------h~~~~ 80 (169)
+.+|||||||+| ++.. ...+++|+|+|+.|++.|+++... .++.+. +.+++..||.. |+..
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 121 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE- 121 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCS-
T ss_pred CCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccc-
Confidence 679999999999 3333 223999999999999999987541 111111 12233334421 2211
Q ss_pred cccHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
....++++++++|||||.+++.+..+.
T Consensus 122 -~~~~~l~~~~~~L~pgG~l~~~~~~~~ 148 (243)
T 3bkw_A 122 -DVARLFRTVHQALSPGGHFVFSTEHPI 148 (243)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred -hHHHHHHHHHHhcCcCcEEEEEeCCcc
Confidence 136899999999999999999876553
No 93
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.32 E-value=1.1e-12 Score=99.90 Aligned_cols=87 Identities=16% Similarity=0.071 Sum_probs=57.9
Q ss_pred CCeEEEEcCccc-c-cC--cCCCCcEEEEeCCHHHHHHHHHHhc---cccceEE-----EeCCCCcccc------cchhh
Q psy13086 18 KVEFVDVGCGKL-Y-LP--MFPSTLILGLEIRVKVSDYVIDEWS---LYLKKMF-----FLYPDPHFKR------CKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-l-a~--~~p~~~v~GiDis~~~l~~a~~~~~---~~~d~v~-----~~f~d~~f~~------~h~~~ 79 (169)
+.+|||||||+| + .. ..++.+++|+|+|+.|++.|++++. ..+..+. +.+++..||. .++..
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 103 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMR 103 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCC
Confidence 679999999999 2 11 2356799999999999999987653 1111111 1233333442 12211
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.-....++++++++|||||.+++.+
T Consensus 104 ~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 104 KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 0113679999999999999999976
No 94
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.32 E-value=8.9e-13 Score=105.71 Aligned_cols=91 Identities=14% Similarity=0.062 Sum_probs=60.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------cccceEE-----Ee---CCCCcccccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------LYLKKMF-----FL---YPDPHFKRCK 76 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------~~~d~v~-----~~---f~d~~f~~~h 76 (169)
..+|||||||+| ++.. +.+|+|+|+|+.|++.|++++. ..++.+. +. +++..||...
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVI 135 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEE
Confidence 578999999999 4444 4599999999999999987641 0111110 11 3334444321
Q ss_pred h-------hhh-----cccHHHHHHHHHhccCCcEEEEEeCChHHH
Q psy13086 77 Y-------KWR-----IINQNLLSEYAYVLSEGGIVYTITDVKDLH 110 (169)
Q Consensus 77 ~-------~~~-----~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~ 110 (169)
. ... -....++++++++|||||.+++.+...+..
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 181 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYI 181 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHH
Confidence 1 111 013679999999999999999987665543
No 95
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.32 E-value=2e-12 Score=98.53 Aligned_cols=88 Identities=18% Similarity=0.156 Sum_probs=60.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEE---eC----CCCcccccchhhhcccH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFF---LY----PDPHFKRCKYKWRIINQ 84 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~---~f----~d~~f~~~h~~~~~~~~ 84 (169)
+.+|||||||+| ++..+|+.+++|+|+|+.|++.|++++. ..++.+.+ .+ ++..||......--...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~~~~~ 145 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLN 145 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCSSSHH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEeccCCHH
Confidence 578999999999 6666788999999999999999998765 12221221 11 11233322111000126
Q ss_pred HHHHHHHHhccCCcEEEEEeC
Q psy13086 85 NLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 85 ~~l~~~~rvLkpGG~l~i~~d 105 (169)
.+++++.++|+|||.+++...
T Consensus 146 ~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 146 DMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp HHHHHHTTSEEEEEEEEEEES
T ss_pred HHHHHHHHhcCCCcEEEEEeC
Confidence 799999999999999999753
No 96
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.32 E-value=1.7e-12 Score=98.76 Aligned_cols=91 Identities=16% Similarity=0.149 Sum_probs=59.4
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc--ccceEE-----EeCCCCcccccch------h
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL--YLKKMF-----FLYPDPHFKRCKY------K 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~--~~d~v~-----~~f~d~~f~~~h~------~ 78 (169)
++.+|||||||+| ++...+. +++|+|+|+.|++.|++++.. .+..+. +.+++..||.... .
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhh
Confidence 3678999999999 4444333 899999999999999987531 111111 1222233332110 0
Q ss_pred -------------hhcccHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 79 -------------WRIINQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 79 -------------~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
..-....+++++.++|||||.+++.+....
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 000126799999999999999999886653
No 97
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.32 E-value=4.6e-12 Score=103.03 Aligned_cols=86 Identities=10% Similarity=0.173 Sum_probs=57.3
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c----ccceEEEe---CCCCccccc------ch
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L----YLKKMFFL---YPDPHFKRC------KY 77 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~----~~d~v~~~---f~d~~f~~~------h~ 77 (169)
++.+|||||||+| ++..+ +.+|+|+|+|+.|++.|++++. . .++.+... ++ ..||.. ++
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-EPVDRIVSIEAFEH 167 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-CCCSEEEEESCGGG
T ss_pred CcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-CCcCEEEEeChHHh
Confidence 4679999999999 45444 5699999999999999998754 0 11111100 11 223321 11
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
...-....+++++.++|||||.+++.+
T Consensus 168 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 168 FGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp TCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 110113689999999999999999975
No 98
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.32 E-value=4.9e-12 Score=98.21 Aligned_cols=83 Identities=13% Similarity=0.177 Sum_probs=57.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------cccceEEEeCCCCccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------------LYLKKMFFLYPDPHFK 73 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------------------~~~d~v~~~f~d~~f~ 73 (169)
+.+|||||||+| ++.. .+++|+|+|+.|++.|++++. .++|.|.+.+ +
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~-----~ 105 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILC-----D 105 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECT-----T
T ss_pred CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeC-----C
Confidence 578999999999 4443 799999999999999988653 1233332211 0
Q ss_pred ccchh-hhcccHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 74 RCKYK-WRIINQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 74 ~~h~~-~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
..++. ..-....++++++++|||||.+++.+..+.
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 141 (243)
T 3d2l_A 106 SLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPY 141 (243)
T ss_dssp GGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred chhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHH
Confidence 11111 000125789999999999999999776554
No 99
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.32 E-value=3.4e-12 Score=98.15 Aligned_cols=87 Identities=13% Similarity=0.092 Sum_probs=57.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---cccceEE-----EeCCCCcccccc------hh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---LYLKKMF-----FLYPDPHFKRCK------YK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---~~~d~v~-----~~f~d~~f~~~h------~~ 78 (169)
..+|||||||+| ++...+ +++|+|+|+.|++.|+++.. ..+..+. +.+++..||... ..
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 578999999999 455544 99999999999999988753 1111111 112222333211 00
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
..-....++++++++|||||.+++.+..
T Consensus 117 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 0001257999999999999999998644
No 100
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.31 E-value=6.3e-12 Score=99.85 Aligned_cols=100 Identities=17% Similarity=0.180 Sum_probs=64.9
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc------------------------cccceEEEeC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS------------------------LYLKKMFFLY 67 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~------------------------~~~d~v~~~f 67 (169)
++.+|||||||+| ++.+.+. +|+|+|+++.|++.|++++. +++|.|..+-
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 3689999999999 5666554 99999999999999987643 2344444321
Q ss_pred CCCcccc-c-------------chhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcC
Q psy13086 68 PDPHFKR-C-------------KYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEH 120 (169)
Q Consensus 68 ~d~~f~~-~-------------h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~ 120 (169)
|++.. . ++........+++.+.++|||||.+++........+ +...+..+
T Consensus 128 --Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~l~~~ 191 (259)
T 3lpm_A 128 --PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLD-IIDIMRKY 191 (259)
T ss_dssp --CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHH-HHHHHHHT
T ss_pred --CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHH-HHHHHHHC
Confidence 11111 0 000001125799999999999999999876555444 34444444
No 101
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.31 E-value=5.9e-12 Score=100.88 Aligned_cols=106 Identities=9% Similarity=0.063 Sum_probs=68.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------cccceEEEeCCCCcc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------LYLKKMFFLYPDPHF 72 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------~~~d~v~~~f~d~~f 72 (169)
+.+|||||||+| ++..+|..+++|+|+|+.|++.|++++. +++|.|....|-...
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDE 189 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCBCT
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCCCc
Confidence 578999999999 6667788999999999999999988753 234555443221111
Q ss_pred cccc-------hhh--h--------cccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCcee
Q psy13086 73 KRCK-------YKW--R--------IINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVE 125 (169)
Q Consensus 73 ~~~h-------~~~--~--------~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~ 125 (169)
...| +.. . -....+++++.++|||||.+++....... ..+.+.+..++ |..
T Consensus 190 ~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~l~~~G-f~~ 257 (276)
T 2b3t_A 190 QDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQG-EAVRQAFILAG-YHD 257 (276)
T ss_dssp TCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCH-HHHHHHHHHTT-CTT
T ss_pred cccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHH-HHHHHHHHHCC-CcE
Confidence 0000 000 0 01257899999999999999997643322 22344444443 543
No 102
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.31 E-value=3.7e-12 Score=99.87 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=55.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------cccceEEEeCCCCccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------------LYLKKMFFLYPDPHFK 73 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------------------~~~d~v~~~f~d~~f~ 73 (169)
+.+|||||||+| ++.. +.+++|+|+|+.|++.|++++. .++|.|.+.+...
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~--- 116 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTI--- 116 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGG---
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCch---
Confidence 579999999999 4433 5699999999999999987653 2233333222111
Q ss_pred ccchhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 74 RCKYKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 74 ~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
++...-....++++++++|||||.+++...
T Consensus 117 --~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 117 --MYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp --GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --hcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 110000125799999999999999988654
No 103
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.31 E-value=9.9e-12 Score=97.05 Aligned_cols=104 Identities=15% Similarity=0.157 Sum_probs=68.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEe---C-----CCCcccccchhhhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL-KKMFFL---Y-----PDPHFKRCKYKWRI 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~---f-----~d~~f~~~h~~~~~ 81 (169)
++.+|||+|||+| ++.. ..+++|+|+|+.+++.|++++. ..+ +.+.+. + ++..||..-....
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~- 167 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDVR- 167 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECSS-
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECCc-
Confidence 3679999999999 4444 6799999999999999998753 111 111111 1 1112222110000
Q ss_pred ccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCcee
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVE 125 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~ 125 (169)
....+++++.++|||||.+++.++...........+..+ |..
T Consensus 168 ~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~--f~~ 209 (248)
T 2yvl_A 168 EPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY--FGN 209 (248)
T ss_dssp CGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT--EEE
T ss_pred CHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh--CCc
Confidence 013689999999999999999998776666666666655 654
No 104
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.31 E-value=4.7e-12 Score=101.99 Aligned_cols=87 Identities=8% Similarity=-0.001 Sum_probs=57.0
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEE---eC-----CCCccccc------ch
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFF---LY-----PDPHFKRC------KY 77 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~---~f-----~d~~f~~~------h~ 77 (169)
++.+|||||||+| ++++ ..+|+|||+|+.|++.|++++...+-...+ .. .+..||.. |+
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~ 122 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINR 122 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGG
T ss_pred CcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHh
Confidence 3679999999999 4443 579999999999999999987521111111 11 01234321 11
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
...-....+++++.++| |||+++++...
T Consensus 123 ~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 123 FTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp SCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred CCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 10001256899999999 99999998644
No 105
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.30 E-value=5.4e-12 Score=96.83 Aligned_cols=85 Identities=8% Similarity=-0.008 Sum_probs=57.0
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEE---------eCCCCcccccchh-h
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-LYL-KKMFF---------LYPDPHFKRCKYK-W 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~---------~f~d~~f~~~h~~-~ 79 (169)
..+|||||||+| ++...| +.+++|+|+|+.|++.|++++. ..+ +.+.+ ...+. ||..... .
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 578999999999 667766 7899999999999999987654 111 11111 01111 3321100 0
Q ss_pred hcccHHHHHHHHHhccCCcEEEEE
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
......+++++.++|||||.+++.
T Consensus 136 ~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 136 VFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp TSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhhHHHHHHHHHhcCCCeEEEEE
Confidence 011367999999999999999874
No 106
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.30 E-value=3.2e-12 Score=100.07 Aligned_cols=87 Identities=14% Similarity=0.067 Sum_probs=58.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc--ccceEE-----EeCCCCccccc------chhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL--YLKKMF-----FLYPDPHFKRC------KYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~--~~d~v~-----~~f~d~~f~~~------h~~~ 79 (169)
..+|||||||+| ++... ..+++|+|+|+.|++.|++++.. .+..+. +.+++..||.. |+..
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 172 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLT 172 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSC
T ss_pred CCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCC
Confidence 689999999999 44443 45799999999999999987641 111111 12333344431 2211
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
.-....++++++++|||||.+++.+.
T Consensus 173 ~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 173 DADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 00135799999999999999999863
No 107
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.30 E-value=3.6e-12 Score=102.89 Aligned_cols=90 Identities=12% Similarity=0.052 Sum_probs=59.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc-------ccceEEEeC---C-CCccccc------
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL-------YLKKMFFLY---P-DPHFKRC------ 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~-------~~d~v~~~f---~-d~~f~~~------ 75 (169)
..+|||||||+| ++.. +.+|+|+|+|+.|++.|++++.. .+..+...+ + +..||..
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGS 160 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHH
T ss_pred CCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCcc
Confidence 458999999999 4444 57999999999999999987541 122211111 1 2234421
Q ss_pred -chhhhcccHHHHHHHHHhccCCcEEEEEeCChHH
Q psy13086 76 -KYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDL 109 (169)
Q Consensus 76 -h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~ 109 (169)
|+...-....++++++++|||||.|++.+.....
T Consensus 161 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 161 INELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp HTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred cccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 1111001267999999999999999998766544
No 108
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.30 E-value=2.2e-12 Score=99.74 Aligned_cols=101 Identities=11% Similarity=0.102 Sum_probs=66.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccc-eEEE-e----CCCCccc------ccchhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLK-KMFF-L----YPDPHFK------RCKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d-~v~~-~----f~d~~f~------~~h~~~ 79 (169)
..+|||||||+| ++...|+++|+|+|+|+.|++.|++++. ..+. .+.. . .+...|| ..|+.+
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~~DvVLa~k~LHlL~ 129 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPVLK 129 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEETCHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCCcChhhHhhHHHhhh
Confidence 679999999999 5567789999999999999999998875 1111 1211 1 1112233 344442
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEe----------CChHHHHHHHHHHhcC
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTIT----------DVKDLHDWIVSHFTEH 120 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~----------d~~~~~~~~~~~~~~~ 120 (169)
. .+..+..+++.|||||.|+-.. ..+.|..++.+.+.+.
T Consensus 130 ~--~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~ 178 (200)
T 3fzg_A 130 Q--QDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGW 178 (200)
T ss_dssp H--TTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTT
T ss_pred h--hHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCc
Confidence 1 2345668999999999986532 1234666666665433
No 109
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.30 E-value=1.5e-11 Score=100.47 Aligned_cols=85 Identities=12% Similarity=0.079 Sum_probs=60.8
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------------cccceEEE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------------LYLKKMFF 65 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------------~~~d~v~~ 65 (169)
..+|||||||+| +++..+..+++|||+|+.|++.|+++++ +++|.|.+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 578999999999 5555567899999999999999987651 23555555
Q ss_pred eCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 66 LYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 66 ~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
..+++... ...+...+++++++++|||||.+++.+..
T Consensus 176 d~~~~~~~----~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 176 DTTDPAGP----ASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp ECC-------------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCCcccc----chhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 44443211 11223468999999999999999998654
No 110
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.29 E-value=3e-12 Score=107.47 Aligned_cols=86 Identities=16% Similarity=0.245 Sum_probs=61.0
Q ss_pred CCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc------------cccceEE-----E------eC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS------------LYLKKMF-----F------LY 67 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~------------~~~d~v~-----~------~f 67 (169)
++.+|||||||+| ++..+ |+.+|+|+|+|+.|++.|++++. ..+..+. + .+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 4689999999999 55554 77899999999999999998643 0111111 1 33
Q ss_pred CCCccccc------chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 68 PDPHFKRC------KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 68 ~d~~f~~~------h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
++..||.. ++... ...++++++|+|||||.|++.+
T Consensus 163 ~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN--KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCC--HHHHHHHHHHHcCCCCEEEEEE
Confidence 44455532 22111 3689999999999999999974
No 111
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.29 E-value=2.4e-12 Score=102.05 Aligned_cols=87 Identities=15% Similarity=0.143 Sum_probs=59.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccc---cceEEEeCCCCccccc-------chhhhcc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLY---LKKMFFLYPDPHFKRC-------KYKWRII 82 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~---~d~v~~~f~d~~f~~~-------h~~~~~~ 82 (169)
+.+|||||||+| ++.. ..+++|+|+|+.|++.|+++.... .|...+.+++..||.. |....
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~-- 130 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN-- 130 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC--
T ss_pred CCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc--
Confidence 679999999999 4443 569999999999999999875410 0000122333344421 11111
Q ss_pred cHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
...++++++++|||||.+++.+....
T Consensus 131 ~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 131 KDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 36899999999999999999876543
No 112
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.29 E-value=5.8e-12 Score=97.28 Aligned_cols=87 Identities=14% Similarity=0.148 Sum_probs=57.2
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-cccc-eEEEeCCC--------------Cccccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-LYLK-KMFFLYPD--------------PHFKRC 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~~~d-~v~~~f~d--------------~~f~~~ 75 (169)
..+|||||||+| ++..+| +.+|+|+|+|+.|++.|++++. ..++ .+.+...| ..||..
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 578999999999 777776 7899999999999999988754 1111 01110000 112211
Q ss_pred chh-hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 76 KYK-WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 76 h~~-~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
... ..-....+++++.++|||||.+++..
T Consensus 145 ~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 145 YIDADKANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 000 00013579999999999999998853
No 113
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.29 E-value=1.5e-11 Score=101.39 Aligned_cols=99 Identities=14% Similarity=-0.001 Sum_probs=69.5
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------------cccceEEEe
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------------LYLKKMFFL 66 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------------~~~d~v~~~ 66 (169)
..+|||||||+| +++..|..+++|+|+|+.|++.|+++++ +++|.|.+.
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d 196 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 196 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEEC
Confidence 578999999999 5555577899999999999999987642 235666555
Q ss_pred CCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCCh----HHHHHHHHHHhcC
Q psy13086 67 YPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVK----DLHDWIVSHFTEH 120 (169)
Q Consensus 67 f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~----~~~~~~~~~~~~~ 120 (169)
.++|+- ....+...++++++.++|||||.+++.+..+ .....+.+.+.+.
T Consensus 197 ~~~p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 197 SSDPIG----PAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL 250 (321)
T ss_dssp CCCSSS----GGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT
T ss_pred CcCCCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 544431 1122334789999999999999999976432 2333444555443
No 114
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.29 E-value=1.3e-11 Score=102.54 Aligned_cols=85 Identities=18% Similarity=0.102 Sum_probs=62.8
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------------cccceEEE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------------LYLKKMFF 65 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------------~~~d~v~~ 65 (169)
..+|||||||+| +++..|..+|++||+|+.|++.|+++++ +++|.|.+
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 578999999999 6666677899999999999999987542 23455554
Q ss_pred eCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 66 LYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 66 ~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
..++|+- ....+....++++++++|||||.|++.+..
T Consensus 201 d~~~p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 201 DSSDPIG----PAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp CCCCTTS----GGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCccC----cchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 4333321 112233578999999999999999997543
No 115
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.29 E-value=5.7e-12 Score=100.91 Aligned_cols=80 Identities=9% Similarity=0.092 Sum_probs=56.1
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------cccceEEEeCCCCcc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------------LYLKKMFFLYPDPHF 72 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------------------~~~d~v~~~f~d~~f 72 (169)
++.+|||||||+| ++.. +.+|+|+|+|+.|++.|++++. +++|.|.+...
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~---- 193 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVV---- 193 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSS----
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccc----
Confidence 3678999999999 4444 5699999999999999988754 12333322111
Q ss_pred cccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 73 KRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 73 ~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.|+...-....+++++.++|||||.+++.+
T Consensus 194 --~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 194 --FMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp --GGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 111111113589999999999999988865
No 116
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.29 E-value=6.4e-12 Score=97.44 Aligned_cols=84 Identities=11% Similarity=0.131 Sum_probs=58.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------cccceEEEeCCCCccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------------LYLKKMFFLYPDPHFK 73 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------------------~~~d~v~~~f~d~~f~ 73 (169)
+.+|||||||+| ++.. ..+++|+|+|+.|++.|++++. +++|.|.+.. +
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~-----~ 110 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCL-----D 110 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECT-----T
T ss_pred CCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcC-----c
Confidence 679999999999 4444 4689999999999999987653 1233333221 0
Q ss_pred ccchhh-hcccHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 74 RCKYKW-RIINQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 74 ~~h~~~-~~~~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
..++.. .-....++++++++|||||.+++.+..+.
T Consensus 111 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 146 (246)
T 1y8c_A 111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYY 146 (246)
T ss_dssp GGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHH
Confidence 111110 00135799999999999999999776554
No 117
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=3e-12 Score=101.61 Aligned_cols=86 Identities=12% Similarity=0.103 Sum_probs=56.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---cccceEEEeCCCCcccccchhhh---c-ccH
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---LYLKKMFFLYPDPHFKRCKYKWR---I-INQ 84 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---~~~d~v~~~f~d~~f~~~h~~~~---~-~~~ 84 (169)
++.+|||||||+| ++. ++.+|+|+|+|+.|++.|+++.. ...|...+.+++..||..+.... + ...
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 111 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFSHLE 111 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHH
T ss_pred CCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhccCHH
Confidence 3689999999999 444 67899999999999998876532 00111112333444443211100 0 136
Q ss_pred HHHHHHHHhccCCcEEEEEeC
Q psy13086 85 NLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 85 ~~l~~~~rvLkpGG~l~i~~d 105 (169)
.++++++++|| ||.+++.+.
T Consensus 112 ~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 112 KSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp HHHHHHHHHBC-SSCEEEEEE
T ss_pred HHHHHHHHHhC-CcEEEEEEc
Confidence 89999999999 998887753
No 118
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.28 E-value=4.2e-12 Score=99.36 Aligned_cols=84 Identities=10% Similarity=0.043 Sum_probs=57.3
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-ccc--ceEEEeC----------CCCcccccc--
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-LYL--KKMFFLY----------PDPHFKRCK-- 76 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~~~--d~v~~~f----------~d~~f~~~h-- 76 (169)
..+|||||||+| ++...| +.+++|+|+|+.|++.|++++. ..+ +.+.+.. ++..||..-
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 458999999999 666654 7899999999999999998764 111 1232211 122333210
Q ss_pred -hhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 77 -YKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 77 -~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.+. ....+++++.++|||||.+++.
T Consensus 137 ~~~~--~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 137 VSPM--DLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CCTT--THHHHHHHHHHHEEEEEEEEET
T ss_pred CcHH--HHHHHHHHHHHHcCCCcEEEEe
Confidence 001 1256899999999999999883
No 119
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.28 E-value=3.5e-12 Score=105.65 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=65.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc------------------cccceEEEeCCCCcccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS------------------LYLKKMFFLYPDPHFKR 74 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~------------------~~~d~v~~~f~d~~f~~ 74 (169)
..+|||||||+| +++..|..+++|+|+|+.|++.|++++. +++|.|.+..+ |..
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~Iv~~~~---~~~ 273 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPP---FHD 273 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEEEEECCC---CCS
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeEEEECCC---ccc
Confidence 568999999999 6667788899999999999999998754 23333332211 110
Q ss_pred cchhhhcccHHHHHHHHHhccCCcEEEEEeCC-hHHHHHHHHHHh
Q psy13086 75 CKYKWRIINQNLLSEYAYVLSEGGIVYTITDV-KDLHDWIVSHFT 118 (169)
Q Consensus 75 ~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~-~~~~~~~~~~~~ 118 (169)
......-....++++++++|||||.+++.+.. ..|..++...+.
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~ 318 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFG 318 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHS
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcC
Confidence 00000001367999999999999999998643 345555555443
No 120
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.28 E-value=1.9e-11 Score=99.57 Aligned_cols=86 Identities=13% Similarity=0.057 Sum_probs=61.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------------cccceEEEe
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------------LYLKKMFFL 66 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------------~~~d~v~~~ 66 (169)
..+|||||||+| +++..+..++++||+|+.|++.|+++++ +++|.|.+.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 578999999999 5555577899999999999999987641 235666655
Q ss_pred CCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 67 YPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 67 f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
.++|+... ...+...+++++++++|||||.+++.+..
T Consensus 171 ~~~~~~~~---~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 171 STDPTAGQ---GGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp C-------------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCcccCc---hhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 55442211 11223478999999999999999998643
No 121
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.28 E-value=1.3e-11 Score=99.52 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=59.8
Q ss_pred CCeEEEEcCcc---c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--cccceEEEeCCC----------------Cc
Q psy13086 18 KVEFVDVGCGK---L-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--LYLKKMFFLYPD----------------PH 71 (169)
Q Consensus 18 ~~~iLDiGCG~---G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--~~~d~v~~~f~d----------------~~ 71 (169)
..+|||||||+ | +++.+|+.+|+|+|+|+.|++.|++++. ..+..+...+.+ ..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~ 157 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSR 157 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTS
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCC
Confidence 47899999999 9 3445788999999999999999998764 111111111111 12
Q ss_pred ccc------cchhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 72 FKR------CKYKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 72 f~~------~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
|+. .|+...-....++++++++|||||.|++...
T Consensus 158 ~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 158 PAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 221 2332211136899999999999999999853
No 122
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.28 E-value=4.3e-12 Score=102.31 Aligned_cols=76 Identities=11% Similarity=0.120 Sum_probs=56.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCCc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDPH 71 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~~ 71 (169)
+.+|||+|||+| ++...+. +|+|+|+|+.|++.|++++. .++|.|.+..|.
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~-- 202 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV-- 202 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS--
T ss_pred CCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch--
Confidence 689999999999 4555444 79999999999999998754 123333332111
Q ss_pred ccccchhhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 72 FKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 72 f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
....+++++.++|||||.+++.+..
T Consensus 203 ----------~~~~~l~~~~~~LkpgG~l~~~~~~ 227 (278)
T 2frn_A 203 ----------RTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp ----------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ----------hHHHHHHHHHHHCCCCeEEEEEEee
Confidence 0146899999999999999997643
No 123
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.28 E-value=5.9e-12 Score=98.20 Aligned_cols=79 Identities=13% Similarity=0.156 Sum_probs=54.1
Q ss_pred CCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc----------------------cccceEEEeCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS----------------------LYLKKMFFLYP 68 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~----------------------~~~d~v~~~f~ 68 (169)
++.+|||||||+| +++.. |..+++|+|+|+.|++.+.++.. .++|.|.+..+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~ 156 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA 156 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC
Confidence 3679999999999 55554 66899999999887665543321 12444443322
Q ss_pred CCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 69 DPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 69 d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
.++ ....+++++.++|||||.+++...
T Consensus 157 ~~~----------~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 157 QPD----------QTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CTT----------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Ccc----------HHHHHHHHHHHHcCCCeEEEEEEc
Confidence 111 013568899999999999999643
No 124
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.28 E-value=4.5e-12 Score=94.44 Aligned_cols=79 Identities=19% Similarity=0.162 Sum_probs=55.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----------------------cccceEEEeCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----------------------LYLKKMFFLYPD 69 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----------------------~~~d~v~~~f~d 69 (169)
+.+|||+|||+| ++.. +..+++|+|+|+.|++.|++++. ..+|.|.+ +
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~---~ 107 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFL---D 107 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEE---C
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEE---C
Confidence 678999999999 3444 55799999999999999987653 12333322 2
Q ss_pred CcccccchhhhcccHHHHHHHH--HhccCCcEEEEEeCC
Q psy13086 70 PHFKRCKYKWRIINQNLLSEYA--YVLSEGGIVYTITDV 106 (169)
Q Consensus 70 ~~f~~~h~~~~~~~~~~l~~~~--rvLkpGG~l~i~~d~ 106 (169)
+.+.. . ....+++.+. ++|||||.+++.+..
T Consensus 108 ~~~~~---~---~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 108 PPYAK---E---TIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp CSSHH---H---HHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCc---c---hHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 21110 0 1246777776 999999999998644
No 125
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.27 E-value=2.3e-11 Score=98.48 Aligned_cols=84 Identities=17% Similarity=0.043 Sum_probs=64.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------------cccceEEEe
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------------LYLKKMFFL 66 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------------~~~d~v~~~ 66 (169)
..+|||||||+| +++..|..+++++|+++.|++.|+++++ +++|.|.+.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 158 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 158 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEc
Confidence 578999999999 5556667899999999999999987642 346666655
Q ss_pred CCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 67 YPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 67 f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
.++|+.. ...+...+++++++++|||||.+++.+.
T Consensus 159 ~~~~~~~----~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 159 SSDPIGP----AETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp CCCTTTG----GGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 5544311 1233447899999999999999999854
No 126
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.27 E-value=1.4e-11 Score=102.31 Aligned_cols=91 Identities=13% Similarity=0.039 Sum_probs=63.3
Q ss_pred CCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~ 70 (169)
+..|||+|||+| ++... |+..++|+|+|+.|++.|++|+. ..+|.|..+ |
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~n---p 280 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILAN---P 280 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEEC---C
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEEC---C
Confidence 578999999999 55555 77899999999999999998764 122333321 1
Q ss_pred cccccch---hhhcccHHHHHHHHHhccCCcEEEEEeCChHHHH
Q psy13086 71 HFKRCKY---KWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHD 111 (169)
Q Consensus 71 ~f~~~h~---~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~ 111 (169)
-+..+.. ...-....+++++.++|||||.+++.+..+.+..
T Consensus 281 Pyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~~ 324 (354)
T 3tma_A 281 PHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALLK 324 (354)
T ss_dssp CSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHHH
T ss_pred CCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHHH
Confidence 1111100 0000126799999999999999999998876654
No 127
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.26 E-value=3.2e-12 Score=102.15 Aligned_cols=91 Identities=16% Similarity=0.072 Sum_probs=60.9
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc-----ccceEEE-----eC-CCCccccc-----
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL-----YLKKMFF-----LY-PDPHFKRC----- 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~-----~~d~v~~-----~f-~d~~f~~~----- 75 (169)
++.+|||||||+| ++.. +..+++|+|+|+.|++.|++++.. .+..+.. .+ ++..||..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 3679999999999 3333 456999999999999999987641 1111111 22 23334431
Q ss_pred -chh--hhcccHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 76 -KYK--WRIINQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 76 -h~~--~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
|+. ..-....++++++++|||||.+++.+....
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 178 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRD 178 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 221 000136799999999999999999886654
No 128
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.26 E-value=3.9e-11 Score=96.84 Aligned_cols=99 Identities=18% Similarity=0.119 Sum_probs=68.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------------cccceEEEe
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------------LYLKKMFFL 66 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------------~~~d~v~~~ 66 (169)
..+|||||||+| +++..+..++++||+++.|++.|+++++ .++|.|.+.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 578999999999 5555566899999999999999987641 245666654
Q ss_pred CCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCC----hHHHHHHHHHHhcC
Q psy13086 67 YPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDV----KDLHDWIVSHFTEH 120 (169)
Q Consensus 67 f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~----~~~~~~~~~~~~~~ 120 (169)
.++|+... ..+...+++++++++|||||.+++.+.. ......+.+.+.+.
T Consensus 156 ~~~~~~~~----~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 209 (275)
T 1iy9_A 156 STEPVGPA----VNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI 209 (275)
T ss_dssp CSSCCSCC----CCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT
T ss_pred CCCCCCcc----hhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh
Confidence 44432111 1122468999999999999999998643 23344445555544
No 129
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.26 E-value=6.3e-12 Score=95.95 Aligned_cols=136 Identities=8% Similarity=-0.043 Sum_probs=74.3
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEe----CCCCcccc------cchhhhcc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFL----YPDPHFKR------CKYKWRII 82 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~----f~d~~f~~------~h~~~~~~ 82 (169)
+.+|||||||+| ++.. ..+++|+|+|+.|++.|+++-...+..+... +++..||. .|+...-.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~ 124 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVPDDR 124 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSCHHH
T ss_pred CCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCCHHH
Confidence 579999999999 4444 5799999999999999986321111111100 23333332 12211101
Q ss_pred cHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhc--CCCce-ecCccccccCCCCCCCCCCCCHHHHHHHHcCCCeE
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTE--HPLFV-ECDLEELKRTDPVVDKLYQSTEEGQKVTRNKGEKF 159 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~--~~~f~-~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~g~~i~ 159 (169)
...++++++++|||||.+++.+...... +....+.. .+.+. ..+....++ .........+++....+.|..+-
T Consensus 125 ~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~aGf~v~ 200 (218)
T 3ou2_A 125 FEAFWESVRSAVAPGGVVEFVDVTDHER-RLEQQDDSEPEVAVRRTLQDGRSFR---IVKVFRSPAELTERLTALGWSCS 200 (218)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECCCC-------------CEEEEECTTSCEEE---EECCCCCHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCCCcc-ccchhhhcccccceeeecCCcchhh---HhhcCCCHHHHHHHHHHCCCEEE
Confidence 2579999999999999999987543211 11111111 11111 111111110 00123566778888899998853
No 130
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.25 E-value=1e-11 Score=96.20 Aligned_cols=88 Identities=11% Similarity=0.027 Sum_probs=54.7
Q ss_pred CCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhcc--ccceEEEeCCC--------Ccccccchh--
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWSL--YLKKMFFLYPD--------PHFKRCKYK-- 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~~--~~d~v~~~f~d--------~~f~~~h~~-- 78 (169)
++.+|||+|||+| ++... |..+++|+|+|+.|++.+++++.. .+..+...+.+ ..||..-..
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 3679999999999 55553 567999999999999998876541 11111110100 112211000
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.......+++++.++|||||.+++..
T Consensus 153 ~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 153 QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 00001245999999999999999863
No 131
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.25 E-value=4.1e-12 Score=100.34 Aligned_cols=82 Identities=12% Similarity=0.149 Sum_probs=53.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------cccceEE-EeCCC-----Ccccccchhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------LYLKKMF-FLYPD-----PHFKRCKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------~~~d~v~-~~f~d-----~~f~~~h~~~ 79 (169)
+.+||||||||| +++. ...+|+|||+|+.|++.|+++.+ ..+..+. -.++. ..++..-.
T Consensus 38 g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~-- 114 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFI-- 114 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSS--
T ss_pred CCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhh--
Confidence 568999999999 4444 33599999999999999877533 0111000 00111 11221100
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
....++++++|+|||||.+++..
T Consensus 115 --~l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 115 --SLDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp --CGGGTHHHHHHHSCTTCEEEEEE
T ss_pred --hHHHHHHHHHHhccCCCEEEEEE
Confidence 12579999999999999999864
No 132
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.25 E-value=1e-11 Score=98.84 Aligned_cols=106 Identities=18% Similarity=0.117 Sum_probs=67.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEEe-------CCCCcccccchhh-hcc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFL-------YPDPHFKRCKYKW-RII 82 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~-------f~d~~f~~~h~~~-~~~ 82 (169)
++.+|||+|||+| +++.. .+++|+|+|+.+++.|++++. ..++ +.+. +++..||.....- .-.
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g--~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLG--GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALPFGPFDLLVANLYAEL 196 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGGGCCEEEEEEECCHHH
T ss_pred CCCEEEEecCCCcHHHHHHHHhC--CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCcCCCCCEEEECCcHHH
Confidence 3679999999999 33333 399999999999999998764 2222 1111 2222233211000 001
Q ss_pred cHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceec
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVEC 126 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~ 126 (169)
...+++++.++|||||.++++.........+.+.+..++ |...
T Consensus 197 ~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~G-f~~~ 239 (254)
T 2nxc_A 197 HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAG-FRPL 239 (254)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTT-CEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCC-CEEE
Confidence 257999999999999999997655554555666666553 5543
No 133
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.24 E-value=1e-11 Score=91.28 Aligned_cols=78 Identities=13% Similarity=0.069 Sum_probs=54.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------c---ccceEEEeC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------L---YLKKMFFLY 67 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------~---~~d~v~~~f 67 (169)
++.+|||+|||+| ++...+ .++|+|+|+.|++.|++++. . ++|.|.+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~- 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA- 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC-
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC-
Confidence 3678999999999 444443 49999999999999987542 0 35555443
Q ss_pred CCCcccccchhhhcccHHHHHHHH--HhccCCcEEEEEeCC
Q psy13086 68 PDPHFKRCKYKWRIINQNLLSEYA--YVLSEGGIVYTITDV 106 (169)
Q Consensus 68 ~d~~f~~~h~~~~~~~~~~l~~~~--rvLkpGG~l~i~~d~ 106 (169)
+.+. . ..+.+++.+. ++|||||.+++.+..
T Consensus 118 --~~~~-~------~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 118 --PPYA-M------DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp --CCTT-S------CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred --CCCc-h------hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 2111 0 1235677777 999999999998643
No 134
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.24 E-value=4.1e-11 Score=98.37 Aligned_cols=86 Identities=13% Similarity=0.038 Sum_probs=63.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------------cccceEEE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------------LYLKKMFF 65 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------------~~~d~v~~ 65 (169)
..+|||||||+| +++..+..+++|||+|+.|++.|+++++ +++|.|.+
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 578999999999 5666677899999999999999986531 34666666
Q ss_pred eCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 66 LYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 66 ~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..++++.. ......+...+++++++++|||||.+++.+
T Consensus 158 d~~~~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 158 DLTDPVGE-DNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp ECCCCBST-TCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCcccc-cCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 65555410 000123335789999999999999999874
No 135
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.24 E-value=2.7e-11 Score=102.26 Aligned_cols=93 Identities=15% Similarity=0.195 Sum_probs=64.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------cccceEEEeCCCCcc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------LYLKKMFFLYPDPHF 72 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------~~~d~v~~~f~d~~f 72 (169)
+.+|||+|||+| ++.. +.+|+|+|+|+.|++.|++++. .++|.|.+..| |
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp---~ 308 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPP---F 308 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCC---C
T ss_pred CCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCc---h
Confidence 579999999999 4444 5799999999999999998754 23444333211 1
Q ss_pred cccchhhh---cccHHHHHHHHHhccCCcEEEEEeCC-hHHHHHHHHHHh
Q psy13086 73 KRCKYKWR---IINQNLLSEYAYVLSEGGIVYTITDV-KDLHDWIVSHFT 118 (169)
Q Consensus 73 ~~~h~~~~---~~~~~~l~~~~rvLkpGG~l~i~~d~-~~~~~~~~~~~~ 118 (169)
|+... -....+++++.++|||||.+++++.. ..|..++.+.+.
T Consensus 309 ---~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 309 ---HVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp ---CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred ---hhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 11000 01357999999999999999998643 356666666554
No 136
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.24 E-value=1.5e-11 Score=101.65 Aligned_cols=82 Identities=9% Similarity=0.123 Sum_probs=62.9
Q ss_pred CeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----------------------cccceEEEeCCCC
Q psy13086 19 VEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----------------------LYLKKMFFLYPDP 70 (169)
Q Consensus 19 ~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----------------------~~~d~v~~~f~d~ 70 (169)
.+|||||||+| +++.+|+.++++||+++.|++.|++++. +++|.|.+...++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 48999999999 5666899999999999999999998642 3466666544333
Q ss_pred cccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 71 HFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 71 ~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
... ...+...+++++++++|||||.|++.+
T Consensus 171 ~~~----~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 171 AIT----PQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp SCC----CGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccc----chhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 211 122345789999999999999999875
No 137
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.24 E-value=2.1e-11 Score=91.04 Aligned_cols=83 Identities=13% Similarity=0.148 Sum_probs=56.8
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----------------cccceEEEeCCCCccccc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----------------LYLKKMFFLYPDPHFKRC 75 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----------------~~~d~v~~~f~d~~f~~~ 75 (169)
++.+|||||||+| ++.. +.+++|+|+|+.|++.|+++++ +++|.|.+..+. .
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~-----~ 118 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNV-----M 118 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCC-----G
T ss_pred CCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcH-----H
Confidence 3679999999999 3333 5699999999999999998753 223333221100 1
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
++...-....+++++.++|||||.+++....
T Consensus 119 ~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 119 GFLAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred hhcChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 1110001257999999999999999997643
No 138
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.23 E-value=8.5e-12 Score=96.64 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=55.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------cccceEEEeCCCCcccccch
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------LYLKKMFFLYPDPHFKRCKY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------~~~d~v~~~f~d~~f~~~h~ 77 (169)
+.+|||||||+| ++...+ +++|+|+|+.|++.|+++.+ .++|.|...+. ..++
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~-----~~~~ 113 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFS-----SVGY 113 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTT-----GGGG
T ss_pred CCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCc-----hHhh
Confidence 679999999999 444443 89999999999999998753 23333331110 1111
Q ss_pred hhh-cccHHHHHHHHHhccCCcEEEEEe
Q psy13086 78 KWR-IINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 78 ~~~-~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
... -....++++++++|||||.+++.+
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 100 012579999999999999999864
No 139
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.23 E-value=1.3e-11 Score=96.14 Aligned_cols=86 Identities=14% Similarity=0.213 Sum_probs=58.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEeCC-----------CCcccccchhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL-KKMFFLYP-----------DPHFKRCKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~f~-----------d~~f~~~h~~~ 79 (169)
..+|||||||+| ++...|+.+|+|+|+|+.+++.|++++. ..+ +.+.+... +..||..-...
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 578999999999 6677788899999999999999998754 111 11211111 11222211000
Q ss_pred h-cccHHHHHHHHHhccCCcEEEEE
Q psy13086 80 R-IINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 80 ~-~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
. -....+++++.++|||||.+++.
T Consensus 135 ~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 135 AKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp GGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 0 01267999999999999999886
No 140
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.23 E-value=3.3e-11 Score=97.43 Aligned_cols=82 Identities=16% Similarity=0.051 Sum_probs=61.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHh-------------c------------------cccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEW-------------S------------------LYLK 61 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~-------------~------------------~~~d 61 (169)
..+|||||||+| +++. +..+++|||+++.|++.|++++ . +++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~fD 154 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGFD 154 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCEE
T ss_pred CCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCee
Confidence 578999999999 5555 7789999999999999998765 1 1356
Q ss_pred eEEEeCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 62 KMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 62 ~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.|.+..++|+-. ...+...+++++++++|+|||.+++.+
T Consensus 155 ~Ii~d~~~~~~~----~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 155 VIIADSTDPVGP----AKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEECCCCC---------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 666555544311 112234789999999999999999875
No 141
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.23 E-value=5.7e-11 Score=97.28 Aligned_cols=83 Identities=12% Similarity=0.043 Sum_probs=59.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------------cccceEEEe
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------------LYLKKMFFL 66 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------------~~~d~v~~~ 66 (169)
..+|||||||+| +++..|..++++||+|+.|++.|+++++ +++|.|.+.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 578999999999 6666677899999999999999987531 245666555
Q ss_pred CCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 67 YPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 67 f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.+++.... ..+...+++++++++|||||.+++.+
T Consensus 176 ~~~~~~~~----~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 176 SSDPMGPA----ESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp CC---------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCcc----hhhhHHHHHHHHHhccCCCeEEEEec
Confidence 44432110 01123579999999999999999876
No 142
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.23 E-value=3.6e-12 Score=99.15 Aligned_cols=83 Identities=6% Similarity=0.045 Sum_probs=57.0
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----cccce-EEEeCC-CCcccccchhhhcccHH
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----LYLKK-MFFLYP-DPHFKRCKYKWRIINQN 85 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----~~~d~-v~~~f~-d~~f~~~h~~~~~~~~~ 85 (169)
++.+|||||||+| ++.. ..+|+|+|+|+.|++.|+++.+ ...|. -.+.++ +..||...... ....
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~--~~~~ 123 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR--GPTS 123 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES--CCSG
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC--CHHH
Confidence 3689999999999 4554 5799999999999999998733 11111 012233 34455332211 1357
Q ss_pred HHHHHHHhccCCcEEEEE
Q psy13086 86 LLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 86 ~l~~~~rvLkpGG~l~i~ 103 (169)
++++++++|||||.++..
T Consensus 124 ~l~~~~~~LkpgG~l~~~ 141 (226)
T 3m33_A 124 VILRLPELAAPDAHFLYV 141 (226)
T ss_dssp GGGGHHHHEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEe
Confidence 899999999999999843
No 143
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.22 E-value=2.5e-11 Score=96.83 Aligned_cols=99 Identities=10% Similarity=0.153 Sum_probs=65.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc--------------------------------cc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL--------------------------------YL 60 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~--------------------------------~~ 60 (169)
+.+|||||||+| ++.+.|..+++|||+++.|++.|++++.. ++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 578999999999 67788888999999999999999876431 12
Q ss_pred ceEEEeCCCCccccc------------chhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhc
Q psy13086 61 KKMFFLYPDPHFKRC------------KYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTE 119 (169)
Q Consensus 61 d~v~~~f~d~~f~~~------------h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~ 119 (169)
|.|... .|++... ++........+++.+.++|||||.|++........+ +...+..
T Consensus 117 D~Vv~n--PPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~l~~ 184 (260)
T 2ozv_A 117 HHVIMN--PPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAE-IIAACGS 184 (260)
T ss_dssp EEEEEC--CCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHH-HHHHHTT
T ss_pred CEEEEC--CCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHH-HHHHHHh
Confidence 322221 1111110 000011136789999999999999999877665443 4444443
No 144
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.22 E-value=1.8e-11 Score=99.54 Aligned_cols=90 Identities=20% Similarity=0.251 Sum_probs=60.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhcc-----------ccceEEE-----e----CCCC--
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSL-----------YLKKMFF-----L----YPDP-- 70 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~-----------~~d~v~~-----~----f~d~-- 70 (169)
..+|||||||+| ++. .+..+++|+|+|+.|++.|+++... .+..+.. . ++++
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 678999999999 333 3567999999999999999876531 1111111 1 2222
Q ss_pred cccc------cchh-hhc-ccHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 71 HFKR------CKYK-WRI-INQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 71 ~f~~------~h~~-~~~-~~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
.||. .|+. ... ....++++++++|||||.+++.+...+
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 4543 2332 110 125899999999999999999886654
No 145
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.22 E-value=2.9e-11 Score=103.23 Aligned_cols=85 Identities=16% Similarity=0.039 Sum_probs=53.6
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------ccc--ceEEEeCCC---C-------c
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------LYL--KKMFFLYPD---P-------H 71 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------~~~--d~v~~~f~d---~-------~ 71 (169)
++.+|||||||+| +|...+...++|||+|+.|++.|++++. ..+ +.|.+...| . .
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~ 252 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIAN 252 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCC
Confidence 4689999999999 5555665569999999999999876431 011 222221111 0 0
Q ss_pred ccccc-----hhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 72 FKRCK-----YKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 72 f~~~h-----~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
++..- +.. .....|++++|+|||||+|++.
T Consensus 253 aDVVf~Nn~~F~p--dl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 253 TSVIFVNNFAFGP--EVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CSEEEECCTTCCH--HHHHHHHHHHTTSCTTCEEEES
T ss_pred ccEEEEcccccCc--hHHHHHHHHHHcCCCCcEEEEe
Confidence 11000 000 1246788999999999999874
No 146
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.22 E-value=3.4e-11 Score=99.05 Aligned_cols=102 Identities=11% Similarity=0.109 Sum_probs=65.3
Q ss_pred CCCeEEEEcCccc-----ccCc-CCCCcEEEEeCCHHHHHHHHHHhcc------------ccceEEEe----------CC
Q psy13086 17 KKVEFVDVGCGKL-----YLPM-FPSTLILGLEIRVKVSDYVIDEWSL------------YLKKMFFL----------YP 68 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~-~p~~~v~GiDis~~~l~~a~~~~~~------------~~d~v~~~----------f~ 68 (169)
++.+|||||||+| ++.. .|..+++|+|+|+.+++.|++++.. ..+.+.+. ++
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 3679999999999 5555 4668999999999999999886531 01222211 11
Q ss_pred CCcccccchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhc
Q psy13086 69 DPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTE 119 (169)
Q Consensus 69 d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~ 119 (169)
+..||..... ......+++++.++|||||.+++.+..........+.+..
T Consensus 185 ~~~fD~V~~~-~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 185 SLTFDAVALD-MLNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRT 234 (336)
T ss_dssp ---EEEEEEC-SSSTTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCeeEEEEC-CCCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 2223321100 0011347999999999999999988776655555555554
No 147
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.20 E-value=1.5e-11 Score=96.60 Aligned_cols=39 Identities=13% Similarity=-0.095 Sum_probs=31.8
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
+.+|||||||+| ++...+ .+|+|+|+|+.|++.|++++.
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~ 100 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLK 100 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHT
T ss_pred CCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHh
Confidence 578999999999 333332 489999999999999988764
No 148
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.20 E-value=2.1e-11 Score=98.02 Aligned_cols=89 Identities=12% Similarity=0.111 Sum_probs=58.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEEe------CC-CCcccccchhhhccc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFL------YP-DPHFKRCKYKWRIIN 83 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~------f~-d~~f~~~h~~~~~~~ 83 (169)
++.+|||+|||+| +|...+..+|+|+|+|+.|++.|++++. ..++.+.+. ++ +..||..-...-...
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~~~ 198 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVHKT 198 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCSSG
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcccH
Confidence 4689999999999 6666677799999999999999998765 222211111 00 111221100000012
Q ss_pred HHHHHHHHHhccCCcEEEEEeC
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d 105 (169)
..+++++.++|||||.+++.+.
T Consensus 199 ~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 199 HKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp GGGHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEEEc
Confidence 4689999999999999998764
No 149
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.19 E-value=5.3e-11 Score=99.15 Aligned_cols=86 Identities=10% Similarity=0.068 Sum_probs=60.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEEEeCCC-----C-ccccc------
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMFFLYPD-----P-HFKRC------ 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~~~f~d-----~-~f~~~------ 75 (169)
..+|||||||+| +++.+|+.+++|+|+ +.|++.|++++. ..+..+...+.+ | .||..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vl 258 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQFL 258 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESCS
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEechh
Confidence 579999999999 777889999999999 999999998765 122222222211 1 34432
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
|+...-....++++++++|||||++++..
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 259 DCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp TTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 11111012468999999999999999875
No 150
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.19 E-value=4.6e-11 Score=98.38 Aligned_cols=83 Identities=17% Similarity=0.044 Sum_probs=57.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------------cccceEEEe
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------------LYLKKMFFL 66 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------------~~~d~v~~~ 66 (169)
..+|||||||+| +++..|..+++++|+|+.|++.|+++++ +++|.|.+.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d 188 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITD 188 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEEC
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEc
Confidence 578999999999 5666677899999999999999987652 235555554
Q ss_pred CCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 67 YPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 67 f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.++|.-. ...+...++++++.++|||||.+++.+
T Consensus 189 ~~~~~~~----~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 189 SSDPVGP----AESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC-----------------HHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCCc----chhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 4333211 112223689999999999999999975
No 151
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.19 E-value=2.4e-11 Score=102.53 Aligned_cols=80 Identities=14% Similarity=0.045 Sum_probs=59.1
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHh-c------------------cccceEEEeCCCCcc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEW-S------------------LYLKKMFFLYPDPHF 72 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~-~------------------~~~d~v~~~f~d~~f 72 (169)
++.+|||||||+| ++.. ..+++|+|+|+.|++.|+++- . +++|.|.....-
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl--- 181 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTL--- 181 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCG---
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChH---
Confidence 3679999999999 3333 459999999999999998651 1 456766654321
Q ss_pred cccchhhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 73 KRCKYKWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 73 ~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
||.. ....++++++++|||||.+++.+..
T Consensus 182 ---~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 182 ---CHIP--YVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp ---GGCT--THHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---HhcC--CHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 1111 1368999999999999999998654
No 152
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.19 E-value=2.2e-11 Score=90.91 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=54.8
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------------cccceEEE
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------------LYLKKMFF 65 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------------~~~d~v~~ 65 (169)
++.+|||+|||+| ++. .+..+++|+|+|+.|++.|++++. .++|.|.+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 3679999999999 233 455799999999999999987653 12333322
Q ss_pred eCCCCcccccchhhhcccHHHHHHH--HHhccCCcEEEEEeCC
Q psy13086 66 LYPDPHFKRCKYKWRIINQNLLSEY--AYVLSEGGIVYTITDV 106 (169)
Q Consensus 66 ~f~d~~f~~~h~~~~~~~~~~l~~~--~rvLkpGG~l~i~~d~ 106 (169)
++.+.. ......++.+ .++|||||.+++.+..
T Consensus 123 ---~~~~~~------~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 123 ---DPPYAK------QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp ---CCCGGG------CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred ---CCCCCc------hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 221110 0124667777 8999999999997643
No 153
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.19 E-value=1.9e-11 Score=93.43 Aligned_cols=86 Identities=13% Similarity=0.081 Sum_probs=54.1
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEEeC--------CCCcccccchhhhcc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFLY--------PDPHFKRCKYKWRII 82 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~f--------~d~~f~~~h~~~~~~ 82 (169)
++.+|||||||+| ++.. ..+++|+|+|+.+++.|++++. ..++.+.+.. ++..||...... .
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~--~ 152 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTA--A 152 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESS--B
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEcc--c
Confidence 3689999999999 4444 5799999999999999998764 1111121111 111222111000 0
Q ss_pred cHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
...+.+++.++|||||++++....
T Consensus 153 ~~~~~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEIPTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSCCTHHHHTEEEEEEEEEEECS
T ss_pred hhhhhHHHHHhcccCcEEEEEEcC
Confidence 012234688999999999997654
No 154
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.19 E-value=6.3e-11 Score=96.01 Aligned_cols=86 Identities=12% Similarity=0.164 Sum_probs=59.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------ccc---ceEEEeCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------LYL---KKMFFLYPD 69 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------~~~---d~v~~~f~d 69 (169)
+.+|||||||+| ++.. |+.+++|+|+|+.|++.|++++. .++ |.|..+-|
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPP- 201 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPP- 201 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCC-
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCC-
Confidence 568999999999 6667 88999999999999999988753 234 55543311
Q ss_pred Cccccc-c------hhh--hcc----cHHHHHHHH-HhccCCcEEEEEeCC
Q psy13086 70 PHFKRC-K------YKW--RII----NQNLLSEYA-YVLSEGGIVYTITDV 106 (169)
Q Consensus 70 ~~f~~~-h------~~~--~~~----~~~~l~~~~-rvLkpGG~l~i~~d~ 106 (169)
+.... + +.. .+. ...+++++. +.|+|||.+++....
T Consensus 202 -yi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 202 -YVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp -CBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred -CCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 11000 0 000 000 126899999 999999999997644
No 155
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.18 E-value=4.3e-11 Score=94.93 Aligned_cols=84 Identities=13% Similarity=0.038 Sum_probs=57.2
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEeCC---------------CCcccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-LYL-KKMFFLYP---------------DPHFKR 74 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~f~---------------d~~f~~ 74 (169)
..+|||||||+| ++...| +.+++|+|+|+.|++.|++++. ..+ +.+.+... +..||.
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 578999999999 666666 7899999999999999988754 111 11211100 122332
Q ss_pred cc---hhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 75 CK---YKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 75 ~h---~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.- .+. ....+++++.++|||||.+++.
T Consensus 160 V~~d~~~~--~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 160 IFVDADKD--NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp EEECSCST--THHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEcCchH--HHHHHHHHHHHhCCCCeEEEEe
Confidence 10 011 1367999999999999999875
No 156
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.18 E-value=6e-12 Score=99.62 Aligned_cols=75 Identities=11% Similarity=0.071 Sum_probs=55.7
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc----------------------------cccceE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS----------------------------LYLKKM 63 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~----------------------------~~~d~v 63 (169)
..+|||||||+| +|...| +.+|+|||+|+.|++.|++++. +++|.|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 578999999999 666665 7899999999999998887653 123333
Q ss_pred EEeCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 64 FFLYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 64 ~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
++..+ .. ....+++++.++|||||.+++.
T Consensus 141 ~~d~~---------~~--~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 141 FIDAD---------KT--NYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEESC---------GG--GHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCC---------hH--HhHHHHHHHHHhcCCCeEEEEE
Confidence 32211 01 1256899999999999999984
No 157
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.17 E-value=3.3e-11 Score=92.43 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=54.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc--ceEEEeC----------CCCc-ccccchh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL--KKMFFLY----------PDPH-FKRCKYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~--d~v~~~f----------~d~~-f~~~h~~ 78 (169)
+.+|||+|||+| ++.. ...+|+|+|+|+.|++.|++++. ..+ +.+.+.. ++.. ||..-..
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 578999999999 2233 23589999999999999988753 111 1111110 0112 2211000
Q ss_pred ---hhcccHHHHHHH--HHhccCCcEEEEEeCCh
Q psy13086 79 ---WRIINQNLLSEY--AYVLSEGGIVYTITDVK 107 (169)
Q Consensus 79 ---~~~~~~~~l~~~--~rvLkpGG~l~i~~d~~ 107 (169)
..-....+++++ .++|||||.+++.+...
T Consensus 133 ~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 000125688888 67899999999986443
No 158
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.17 E-value=1.6e-11 Score=100.27 Aligned_cols=74 Identities=15% Similarity=0.164 Sum_probs=51.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------cccceEEEeCCCCcc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------LYLKKMFFLYPDPHF 72 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------~~~d~v~~~f~d~~f 72 (169)
+.+||||||||| +++. +..+|+|||+|+.|++.+.++-+ .++|.+.+.. .|
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~---sf 161 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDV---SF 161 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECC---SS
T ss_pred ccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEe---eH
Confidence 568999999999 3333 55699999999999998644211 0133332211 11
Q ss_pred cccchhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 73 KRCKYKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 73 ~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
++ ...+|.+++|+|||||.+++.
T Consensus 162 ---~s-----l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 162 ---IS-----LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp ---SC-----GGGTHHHHHHHSCTTCEEEEE
T ss_pred ---hh-----HHHHHHHHHHHcCcCCEEEEE
Confidence 11 256899999999999999886
No 159
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=4e-11 Score=91.88 Aligned_cols=89 Identities=11% Similarity=0.159 Sum_probs=56.3
Q ss_pred CCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc-cccceEEEe-------CC-CCcccccchhhhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFL-------YP-DPHFKRCKYKWRI 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~-------f~-d~~f~~~h~~~~~ 81 (169)
++.+|||||||+| ++... |..+++|+|+|+.+++.|++++. ..++.+.+. ++ +..||......
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-- 154 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA-- 154 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESS--
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECC--
Confidence 3679999999999 55554 55799999999999999988754 111111111 11 11233211000
Q ss_pred ccHHHHHHHHHhccCCcEEEEEeCCh
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTITDVK 107 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~~d~~ 107 (169)
....+.+++.++|||||.+++.....
T Consensus 155 ~~~~~~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 155 AGPKIPEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp BBSSCCHHHHHTEEEEEEEEEEESSS
T ss_pred chHHHHHHHHHHcCCCcEEEEEECCC
Confidence 01123368899999999999987544
No 160
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.17 E-value=9.7e-11 Score=96.13 Aligned_cols=88 Identities=16% Similarity=0.108 Sum_probs=59.3
Q ss_pred CCCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPD 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d 69 (169)
++.+|||+|||+| ++...+ ...|+|+|+|+.|++.|++++. .++|.|.+..|-
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pc 197 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPC 197 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCC
Confidence 3679999999999 666554 5799999999999999987653 245555543220
Q ss_pred ---Cccc----cc-chh-hh-----cccHHHHHHHHHhccCCcEEEEEe
Q psy13086 70 ---PHFK----RC-KYK-WR-----IINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 70 ---~~f~----~~-h~~-~~-----~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..+. .. ++. .. -....+++++.++|||||+++++|
T Consensus 198 sg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 198 TGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp TSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 0000 00 000 00 012579999999999999999975
No 161
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.16 E-value=6.2e-11 Score=97.16 Aligned_cols=126 Identities=17% Similarity=0.045 Sum_probs=77.8
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEEEeCCCC---cccc------cchh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMFFLYPDP---HFKR------CKYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~~~f~d~---~f~~------~h~~ 78 (169)
..+|||||||+| +++.+|+.+++++|+ +.|++.|++++. ..+..+...+.++ .||. .|+.
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~ 248 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLHDW 248 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCGGGS
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhhccC
Confidence 578999999999 777889999999999 999999998754 1122222222122 3342 1211
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEeCChHHHH---HH-HHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHHc
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTITDVKDLHD---WI-VSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTRN 154 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~---~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~ 154 (169)
..-....++++++++|||||++++.+....... ++ ...+... + ...++..+++....+.
T Consensus 249 ~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~-------------~----~~~~t~~e~~~ll~~a 311 (332)
T 3i53_A 249 DDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYF-------------G----GKERSLAELGELAAQA 311 (332)
T ss_dssp CHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHH-------------S----CCCCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhC-------------C----CCCCCHHHHHHHHHHC
Confidence 110125799999999999999999753211100 00 0000000 0 1235567888888999
Q ss_pred CCCeEEE
Q psy13086 155 KGEKFCA 161 (169)
Q Consensus 155 g~~i~~~ 161 (169)
|..+..+
T Consensus 312 Gf~~~~~ 318 (332)
T 3i53_A 312 GLAVRAA 318 (332)
T ss_dssp TEEEEEE
T ss_pred CCEEEEE
Confidence 9776544
No 162
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.16 E-value=9.7e-11 Score=87.53 Aligned_cols=102 Identities=7% Similarity=0.075 Sum_probs=62.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc------------cccceEEEeCCCCcccccc-hhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS------------LYLKKMFFLYPDPHFKRCK-YKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~------------~~~d~v~~~f~d~~f~~~h-~~~ 79 (169)
+.+|||||||+| ++... +++|+|+|+.|++. ..++. +++|.|....|--+..... +..
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~~~~~ 99 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDPIIGG 99 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCTTTBC
T ss_pred CCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-ccCCeEEECChhhhcccCCCCEEEECCCCccCCccccccC
Confidence 579999999999 55544 99999999999987 22222 5677776532211100000 000
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCcee
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVE 125 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~ 125 (169)
......+++++.+.| |||.+++.+........+.+.+.+.+ |..
T Consensus 100 ~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~g-f~~ 143 (170)
T 3q87_B 100 GYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERG-YGT 143 (170)
T ss_dssp CGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTT-CEE
T ss_pred CcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCC-CcE
Confidence 000136888999999 99999998754444444555555443 443
No 163
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.16 E-value=1.1e-10 Score=93.82 Aligned_cols=111 Identities=10% Similarity=0.006 Sum_probs=69.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCC-CcEEEEeCCHHHHHHHHHHhc-------------------------cccceEEE
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPS-TLILGLEIRVKVSDYVIDEWS-------------------------LYLKKMFF 65 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~-~~v~GiDis~~~l~~a~~~~~-------------------------~~~d~v~~ 65 (169)
++.+|||+|||+| ++...++ .+|+|+|+|+.+++.+++++. ..+|.|.+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~ 162 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILL 162 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEE
Confidence 3679999999999 6666565 799999999999999987643 12444443
Q ss_pred eCCCCcccccc--------hhhh--cccHHHHHHHHHhccCCcEEEEEeCC--hHH-HHHHHHHHhcCCCceecC
Q psy13086 66 LYPDPHFKRCK--------YKWR--IINQNLLSEYAYVLSEGGIVYTITDV--KDL-HDWIVSHFTEHPLFVECD 127 (169)
Q Consensus 66 ~f~d~~f~~~h--------~~~~--~~~~~~l~~~~rvLkpGG~l~i~~d~--~~~-~~~~~~~~~~~~~f~~~~ 127 (169)
..|-......+ .... -....+++++.++|||||.++++|-. +.. .......+..|+.|+..+
T Consensus 163 d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~~~~~~~~~ 237 (274)
T 3ajd_A 163 DAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQKRNDVELII 237 (274)
T ss_dssp EECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHHCSSEEEEC
T ss_pred cCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHhCCCcEEec
Confidence 21110000000 0000 12367999999999999999997621 111 122233445788887654
No 164
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.16 E-value=1.5e-10 Score=105.86 Aligned_cols=94 Identities=14% Similarity=0.068 Sum_probs=63.3
Q ss_pred CCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc-------cccceEE--------EeCCCCcccc-
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS-------LYLKKMF--------FLYPDPHFKR- 74 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~-------~~~d~v~--------~~f~d~~f~~- 74 (169)
++.+|||||||+| +++.. |..+|+|||+|+.|++.|++++. ..+..+. +.+++..||.
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 3678999999999 66666 45799999999999999988543 0122222 1233334443
Q ss_pred -----cchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHH
Q psy13086 75 -----CKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHD 111 (169)
Q Consensus 75 -----~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~ 111 (169)
.+|...-....++++++|+|||| .+++.+...++..
T Consensus 801 V~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~ 841 (950)
T 3htx_A 801 TCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNT 841 (950)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHH
T ss_pred EEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhh
Confidence 22221111235899999999999 8888887765543
No 165
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.15 E-value=4.1e-11 Score=97.78 Aligned_cols=86 Identities=12% Similarity=0.065 Sum_probs=58.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEEEeCCC-C---cccc------cch
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMFFLYPD-P---HFKR------CKY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~~~f~d-~---~f~~------~h~ 77 (169)
..+|||||||+| +++.+|+.+++|+|+| .|++.|++++. ..+..+...+.+ + .||. .|+
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l~~ 244 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFLHH 244 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCGGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchhcc
Confidence 679999999999 6777889999999999 99999988753 112222211111 1 1332 121
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
...-....++++++++|||||.+++.+
T Consensus 245 ~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 245 FDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 111012579999999999999999875
No 166
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.14 E-value=3.3e-10 Score=87.27 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=53.1
Q ss_pred CCeEEEEcCccc-ccCcCCCCcEEEEeCCHHHHHHHHHH-hc-------------cccceEEEeCCCCcccccchhhhcc
Q psy13086 18 KVEFVDVGCGKL-YLPMFPSTLILGLEIRVKVSDYVIDE-WS-------------LYLKKMFFLYPDPHFKRCKYKWRII 82 (169)
Q Consensus 18 ~~~iLDiGCG~G-la~~~p~~~v~GiDis~~~l~~a~~~-~~-------------~~~d~v~~~f~d~~f~~~h~~~~~~ 82 (169)
+.+|||||||+| ++...... +|+|+|+.|++.|+++ +. +++|.|.+... .++.. .
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~------l~~~~--~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTT------ICFVD--D 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESC------GGGSS--C
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcch------Hhhcc--C
Confidence 568999999999 32222222 9999999999999875 21 23333332211 11111 1
Q ss_pred cHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
...+++++.++|||||.+++.+..
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 267999999999999999998643
No 167
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.14 E-value=6.8e-11 Score=98.09 Aligned_cols=87 Identities=13% Similarity=0.012 Sum_probs=59.8
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c----ccceEEEeCCCC---ccccc------chh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L----YLKKMFFLYPDP---HFKRC------KYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~----~~d~v~~~f~d~---~f~~~------h~~ 78 (169)
..+|||||||+| ++..+|+.+++|+|+ +.|++.|++++. . .+..+...+.++ .||.. |+.
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~ 261 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLLNW 261 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGGGS
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEeccccCC
Confidence 679999999999 667789999999999 999999998764 1 222222222111 13321 211
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
.......++++++++|||||.+++.+.
T Consensus 262 ~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 262 SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 110113799999999999999998765
No 168
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.14 E-value=5.7e-11 Score=98.74 Aligned_cols=84 Identities=17% Similarity=0.224 Sum_probs=54.6
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cc----cceEE-----EeCCCCcccccch----
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LY----LKKMF-----FLYPDPHFKRCKY---- 77 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~----~d~v~-----~~f~d~~f~~~h~---- 77 (169)
++.+|||||||+| +++. +..+|+|+|+| +|++.|++++. .. +..+. +.+++..||....
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 3678999999999 4444 55699999999 59999988654 11 11111 1233333442211
Q ss_pred ---hhhcccHHHHHHHHHhccCCcEEEE
Q psy13086 78 ---KWRIINQNLLSEYAYVLSEGGIVYT 102 (169)
Q Consensus 78 ---~~~~~~~~~l~~~~rvLkpGG~l~i 102 (169)
...-....+++++.|+|||||.+++
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 0011236799999999999999864
No 169
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.14 E-value=2.9e-11 Score=93.46 Aligned_cols=87 Identities=11% Similarity=0.147 Sum_probs=57.6
Q ss_pred CCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhcc-c-----cceEEEeC--------CCCcccccc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWSL-Y-----LKKMFFLY--------PDPHFKRCK 76 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~~-~-----~d~v~~~f--------~d~~f~~~h 76 (169)
++.+|||||||+| +++.. +..+|+|+|+|+.|++.|++++.. . .+.+.+.. ++..||..+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 3679999999999 55553 557999999999999999877541 0 12222211 122244322
Q ss_pred hhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 77 YKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 77 ~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
... ....+++++.++|||||.+++.+.
T Consensus 157 ~~~--~~~~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 157 VGA--AAPVVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp ECS--BBSSCCHHHHHTEEEEEEEEEEES
T ss_pred ECC--chHHHHHHHHHhcCCCcEEEEEEe
Confidence 111 123467889999999999999763
No 170
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.14 E-value=9.5e-11 Score=91.72 Aligned_cols=84 Identities=13% Similarity=0.152 Sum_probs=56.1
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEeCC------------C--Cccccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-LYL-KKMFFLYP------------D--PHFKRC 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~f~------------d--~~f~~~ 75 (169)
..+|||||||+| ++...| +.+++|+|+|+.+++.|++++. ..+ +.+.+... + ..||..
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 578999999999 667666 6799999999999999987653 001 11111000 0 122211
Q ss_pred c---hhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 76 K---YKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 76 h---~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
- ... ....+++++.++|||||.+++.
T Consensus 153 ~~d~~~~--~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 153 FIDADKR--NYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EECSCGG--GHHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCHH--HHHHHHHHHHHHcCCCeEEEEe
Confidence 0 000 1257899999999999999885
No 171
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.14 E-value=1.2e-10 Score=97.13 Aligned_cols=86 Identities=15% Similarity=-0.011 Sum_probs=60.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEEEeCCCC---cccc------cchh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMFFLYPDP---HFKR------CKYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~~~f~d~---~f~~------~h~~ 78 (169)
..+|||||||+| +++.+|+.+++|+|+ +.|++.|++++. ..+..+...+.++ .||. .|+.
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh~~ 281 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLHDW 281 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGGGS
T ss_pred CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhccC
Confidence 689999999999 777899999999999 999999998764 1122222222222 2332 1211
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..-....++++++++|||||++++.+
T Consensus 282 ~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 282 DDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 11111369999999999999999974
No 172
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.14 E-value=3.3e-11 Score=95.53 Aligned_cols=86 Identities=16% Similarity=0.171 Sum_probs=57.1
Q ss_pred CCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHH------HHHHHHHHhc-ccc-ceEE-----------EeCCCCc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVK------VSDYVIDEWS-LYL-KKMF-----------FLYPDPH 71 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~------~l~~a~~~~~-~~~-d~v~-----------~~f~d~~ 71 (169)
++.+|||||||+| ++... |+.+++|+|+|+. |++.|++++. ..+ +.+. +.+++..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 122 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQH 122 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCC
Confidence 4679999999999 55664 6689999999997 9999988764 111 1122 1223344
Q ss_pred cccc------chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 72 FKRC------KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 72 f~~~------h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
||.. |+... ...+++.+.++++|||.+++.+
T Consensus 123 fD~v~~~~~l~~~~~--~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 123 FDRVVLAHSLWYFAS--ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp CSEEEEESCGGGSSC--HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEEEccchhhCCC--HHHHHHHHHHHhCCCCEEEEEE
Confidence 5532 22111 2456777777777799999975
No 173
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.13 E-value=1.2e-10 Score=90.08 Aligned_cols=86 Identities=13% Similarity=0.117 Sum_probs=55.8
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEeCCC--------------Cccccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-LYL-KKMFFLYPD--------------PHFKRC 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~f~d--------------~~f~~~ 75 (169)
..+|||||||+| ++...| +.+++|+|+|+.+++.|++++. ..+ +.+.+...| ..||..
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 578999999999 666666 6899999999999999987653 001 111110000 111110
Q ss_pred chh-hhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 76 KYK-WRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 76 h~~-~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
... .......+++++.++|+|||.+++.
T Consensus 150 ~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 150 VVDADKENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 000 0001257899999999999999885
No 174
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.13 E-value=1.1e-10 Score=96.65 Aligned_cols=130 Identities=12% Similarity=0.020 Sum_probs=78.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEEEeCCC---Ccccc------cchh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMFFLYPD---PHFKR------CKYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~~~f~d---~~f~~------~h~~ 78 (169)
..+|||||||+| +++.+|+.+++|+|+ +.|++.|++++. ..+..+...+.+ +..|. .|+.
T Consensus 191 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh~~ 269 (359)
T 1x19_A 191 VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSA 269 (359)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGGGS
T ss_pred CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhccC
Confidence 679999999999 777789999999999 999999998754 112222221211 11121 1211
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEeCC------hHHHHHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHH
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTITDV------KDLHDWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVT 152 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~d~------~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~ 152 (169)
..-....++++++++|||||++++.+.. +.+...+ ..+...+ ........+...+++....
T Consensus 270 ~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~-~~~~~~~------------~g~~~~~~~t~~e~~~ll~ 336 (359)
T 1x19_A 270 NEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLS-HYILGAG------------MPFSVLGFKEQARYKEILE 336 (359)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHH-HHGGGGG------------SSCCCCCCCCGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHH-HHHHhcC------------CCCcccCCCCHHHHHHHHH
Confidence 1101357899999999999999887511 1111111 1111100 0000013367788899999
Q ss_pred HcCCCeEEE
Q psy13086 153 RNKGEKFCA 161 (169)
Q Consensus 153 ~~g~~i~~~ 161 (169)
+.|..+..+
T Consensus 337 ~aGf~~v~~ 345 (359)
T 1x19_A 337 SLGYKDVTM 345 (359)
T ss_dssp HHTCEEEEE
T ss_pred HCCCceEEE
Confidence 999887554
No 175
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.12 E-value=5e-11 Score=93.13 Aligned_cols=89 Identities=11% Similarity=0.134 Sum_probs=57.3
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEEe-------CCCCc-ccccchhhhcc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFL-------YPDPH-FKRCKYKWRII 82 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~-------f~d~~-f~~~h~~~~~~ 82 (169)
++.+|||||||+| +++..+ .+++|+|+|+.+++.|++++. ..++.+.+. +++.. ||...... .
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~--~ 167 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTA--G 167 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS--B
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECC--c
Confidence 3678999999999 555556 799999999999999998764 112222211 11111 22211000 0
Q ss_pred cHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
...+.+++.++|||||.+++.+....
T Consensus 168 ~~~~~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 168 APKIPEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp BSSCCHHHHHTEEEEEEEEEEECSSS
T ss_pred HHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 12244578999999999999876543
No 176
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.12 E-value=9.7e-11 Score=89.87 Aligned_cols=79 Identities=19% Similarity=0.246 Sum_probs=53.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----------------------cccceEEEeCCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----------------------LYLKKMFFLYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----------------------~~~d~v~~~f~d~ 70 (169)
+.+|||+|||+| ++.+ ...+|+|+|+|+.|++.|++++. .++|.|.+ +|
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~-~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~---~~ 130 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSR-YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFV---DP 130 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEE---CC
T ss_pred CCeEEEeCCCcCHHHHHHHhc-CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEE---CC
Confidence 578999999999 2333 22489999999999999998753 12333332 22
Q ss_pred cccccchhhhcccHHHHHHHHH--hccCCcEEEEEeCC
Q psy13086 71 HFKRCKYKWRIINQNLLSEYAY--VLSEGGIVYTITDV 106 (169)
Q Consensus 71 ~f~~~h~~~~~~~~~~l~~~~r--vLkpGG~l~i~~d~ 106 (169)
.|.. . ....+++++.+ +|||||.+++.+..
T Consensus 131 p~~~----~--~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 131 PFRR----G--LLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SSST----T--THHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCC----C--cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1110 0 12467888865 59999999998643
No 177
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.12 E-value=1.4e-10 Score=91.88 Aligned_cols=76 Identities=11% Similarity=0.122 Sum_probs=50.4
Q ss_pred CCCeEEEEcCccc-----ccCc-CCCCcEEEEeCCHHHHHH----HHHH--hc----------------cccceEEEeCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPM-FPSTLILGLEIRVKVSDY----VIDE--WS----------------LYLKKMFFLYP 68 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~-~p~~~v~GiDis~~~l~~----a~~~--~~----------------~~~d~v~~~f~ 68 (169)
++.+|||+|||+| +|.. -|+..|+|+|+|+.|++. |+++ +. .++|.|++..+
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a 155 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIA 155 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCC
Confidence 4789999999999 5554 367799999999988643 3332 11 23454444333
Q ss_pred CCcccccchhhhcccHH-HHHHHHHhccCCcEEEEE
Q psy13086 69 DPHFKRCKYKWRIINQN-LLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 69 d~~f~~~h~~~~~~~~~-~l~~~~rvLkpGG~l~i~ 103 (169)
.|. ... +++.+.++|||||+|+++
T Consensus 156 ~~~-----------~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 156 QPD-----------QTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp CTT-----------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred Chh-----------HHHHHHHHHHHhCCCCeEEEEE
Confidence 221 123 455666699999999986
No 178
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.11 E-value=1.1e-10 Score=91.81 Aligned_cols=85 Identities=13% Similarity=0.056 Sum_probs=57.1
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-cccc-eEEEeCC---------------CCcccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-LYLK-KMFFLYP---------------DPHFKR 74 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~~~d-~v~~~f~---------------d~~f~~ 74 (169)
..+|||||||+| ++...| +.+++++|+|+.+++.|++++. ..++ .+.+... +..||.
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 578999999999 666666 7899999999999999988754 1111 1111100 112221
Q ss_pred c---chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 75 C---KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 75 ~---h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
. +.+. ....+++++.++|||||.+++.+
T Consensus 151 I~~d~~~~--~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 151 GFVDADKP--NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEECSCGG--GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCchH--HHHHHHHHHHHhcCCCeEEEEec
Confidence 1 0011 13679999999999999998753
No 179
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.11 E-value=7.8e-11 Score=91.22 Aligned_cols=87 Identities=21% Similarity=0.201 Sum_probs=54.9
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--cccceEEEeC-----CCCcccccchhhhcccH
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--LYLKKMFFLY-----PDPHFKRCKYKWRIINQ 84 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--~~~d~v~~~f-----~d~~f~~~h~~~~~~~~ 84 (169)
++.+|||||||+| ++... .+++|+|+|+.|++.|++++. +.+..+.... ++..||...... ...
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~--~~~ 145 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWA--TAP 145 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESS--BBS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECC--cHH
Confidence 3679999999999 44443 699999999999999998764 1121111111 112233211000 011
Q ss_pred HHHHHHHHhccCCcEEEEEeCCh
Q psy13086 85 NLLSEYAYVLSEGGIVYTITDVK 107 (169)
Q Consensus 85 ~~l~~~~rvLkpGG~l~i~~d~~ 107 (169)
.+.+++.++|||||.+++.+...
T Consensus 146 ~~~~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 146 TLLCKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp SCCHHHHHTEEEEEEEEEEECSS
T ss_pred HHHHHHHHHcCCCcEEEEEEcCC
Confidence 23457899999999999987543
No 180
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.11 E-value=1.1e-10 Score=91.39 Aligned_cols=87 Identities=14% Similarity=0.198 Sum_probs=57.4
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-cccc-eEEEe-----------------------
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-LYLK-KMFFL----------------------- 66 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~~~d-~v~~~----------------------- 66 (169)
..+|||||||+| ++...| ..+++|+|+|+.+++.|++++. ..++ .+.+.
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 578999999999 666666 6899999999999999988753 1111 11110
Q ss_pred CCC--Ccccccchhh-hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 67 YPD--PHFKRCKYKW-RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 67 f~d--~~f~~~h~~~-~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
|++ ..||...... .-....+++++.++|||||.+++.+
T Consensus 141 f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 010 2233211000 0012578999999999999999864
No 181
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.11 E-value=1.5e-10 Score=99.32 Aligned_cols=87 Identities=18% Similarity=0.138 Sum_probs=57.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHH-------HHHhc-cc--cceEEEeCC----C--------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYV-------IDEWS-LY--LKKMFFLYP----D-------- 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a-------~~~~~-~~--~d~v~~~f~----d-------- 69 (169)
++.+|||||||+| +|...+...|+|||+|+.|++.| ++++. .. ++.+.+... +
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 4679999999999 56666667899999999998888 66554 12 233433211 1
Q ss_pred Ccccccchhhhc---ccHHHHHHHHHhccCCcEEEEE
Q psy13086 70 PHFKRCKYKWRI---INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 70 ~~f~~~h~~~~~---~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
..||..-....+ ....+|+++.++|||||++++.
T Consensus 322 ~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 322 PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred CCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 122221100000 1256789999999999999885
No 182
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.11 E-value=2.4e-10 Score=97.41 Aligned_cols=111 Identities=14% Similarity=0.140 Sum_probs=72.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----------------------cccceEEEeCCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----------------------LYLKKMFFLYPD 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----------------------~~~d~v~~~f~d 69 (169)
++.+|||+|||+| ++...++..++|+|+|+.+++.+++++. +++|.|.+..|-
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc 325 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCC
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCC
Confidence 3679999999999 6666777899999999999999987753 134555442221
Q ss_pred Ccccccch------hh---hc-----ccHHHHHHHHHhccCCcEEEEEeC--Ch-HHHHHHHHHHhcCCCceecC
Q psy13086 70 PHFKRCKY------KW---RI-----INQNLLSEYAYVLSEGGIVYTITD--VK-DLHDWIVSHFTEHPLFVECD 127 (169)
Q Consensus 70 ~~f~~~h~------~~---~~-----~~~~~l~~~~rvLkpGG~l~i~~d--~~-~~~~~~~~~~~~~~~f~~~~ 127 (169)
......+. .+ .+ .+..+++++.++|||||.++++|- .+ +-.......+..|+.|...+
T Consensus 326 sg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~~~~~~~ 400 (429)
T 1sqg_A 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTADAELCE 400 (429)
T ss_dssp CCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTCEECS
T ss_pred CcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCCCCEEeC
Confidence 10000000 00 00 125789999999999999999862 22 22233445566788887764
No 183
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.10 E-value=1.1e-10 Score=95.51 Aligned_cols=88 Identities=15% Similarity=0.153 Sum_probs=55.8
Q ss_pred CCCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc-cccceEEE---eCC-----CCcccccchhhhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS-LYLKKMFF---LYP-----DPHFKRCKYKWRI 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~---~f~-----d~~f~~~h~~~~~ 81 (169)
++.+|||||||+| +++..+ +.+|+|+|+|+.|++.|++++. ..++.+.+ .+. +..||......
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~-- 152 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTV-- 152 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS--
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcC--
Confidence 3679999999999 555555 4679999999999999998764 11221221 111 12233211000
Q ss_pred ccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
....+.+++.++|||||++++....
T Consensus 153 ~~~~~~~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 153 GVDEVPETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp BBSCCCHHHHHHEEEEEEEEEEBCB
T ss_pred CHHHHHHHHHHhcCCCcEEEEEECC
Confidence 0011236788999999999998643
No 184
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.10 E-value=1.2e-10 Score=95.27 Aligned_cols=85 Identities=20% Similarity=0.025 Sum_probs=58.3
Q ss_pred CeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEEEeCCCC---cccc------cchhh
Q psy13086 19 VEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMFFLYPDP---HFKR------CKYKW 79 (169)
Q Consensus 19 ~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~~~f~d~---~f~~------~h~~~ 79 (169)
.+|||||||+| +++.+|+.+++|+|+ +.|++.|++++. ..+..+...+.++ .||. .|+..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~ 247 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLD 247 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCGGGCC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhccCCC
Confidence 78999999999 677789999999999 999999988754 1122222112111 2332 12111
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.-....++++++++|||||++++..
T Consensus 248 ~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 248 EAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 1112479999999999999999985
No 185
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.10 E-value=1e-10 Score=96.32 Aligned_cols=86 Identities=12% Similarity=0.002 Sum_probs=59.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEEEeCC------CCcccc------c
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMFFLYP------DPHFKR------C 75 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~~~f~------d~~f~~------~ 75 (169)
..+|||||||+| +++.+|+.+++|+|+ +.|++.|++++. ..+..+...+. +..||. .
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 579999999999 777889999999999 889999987654 11222221111 112332 1
Q ss_pred chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 76 KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 76 h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
|+...-....++++++++|||||++++..
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 21111012579999999999999999875
No 186
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.10 E-value=3.6e-10 Score=97.65 Aligned_cols=112 Identities=16% Similarity=0.245 Sum_probs=70.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCC-CcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPS-TLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPD 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~-~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d 69 (169)
++.+|||+|||+| +|...++ ..|+|+|+|+.+++.+++|+. +++|.|.+.-|-
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCCc
Confidence 3689999999999 6666554 699999999999999987753 346666543221
Q ss_pred Cc-------ccccc-h----hhhc--ccHHHHHHHHHhccCCcEEEEEeC--ChHHH-HHHHHHHhcCCCceecCc
Q psy13086 70 PH-------FKRCK-Y----KWRI--INQNLLSEYAYVLSEGGIVYTITD--VKDLH-DWIVSHFTEHPLFVECDL 128 (169)
Q Consensus 70 ~~-------f~~~h-~----~~~~--~~~~~l~~~~rvLkpGG~l~i~~d--~~~~~-~~~~~~~~~~~~f~~~~~ 128 (169)
.. ++... + ...+ .+..+++++.++|||||+|+.+|- .+... .-....+..+|.|+..+.
T Consensus 181 Sg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l~~~~~~~l~~~ 256 (464)
T 3m6w_A 181 SGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPEFRLEDA 256 (464)
T ss_dssp CCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCTTEEEECC
T ss_pred CCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHHHHCCCcEEEec
Confidence 00 00000 0 0000 136799999999999999998752 22211 122233456777776543
No 187
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.09 E-value=4.7e-11 Score=94.14 Aligned_cols=98 Identities=8% Similarity=0.032 Sum_probs=63.0
Q ss_pred CCeEEEEcCccc-----ccCc----CCCCcEEEEeCCHHHHHHHHHH---hc---c--------------ccceEEEeCC
Q psy13086 18 KVEFVDVGCGKL-----YLPM----FPSTLILGLEIRVKVSDYVIDE---WS---L--------------YLKKMFFLYP 68 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~----~p~~~v~GiDis~~~l~~a~~~---~~---~--------------~~d~v~~~f~ 68 (169)
..+|||||||+| +++. .|+.+|+|||+|+.|++.|+.. +. + ++|.|++..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~- 160 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN- 160 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES-
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC-
Confidence 568999999999 5555 6789999999999999887621 11 0 123222211
Q ss_pred CCcccccchhhhcccHHHHHHHHH-hccCCcEEEEEeCC---hHH-HHHHHHHHhcCC-Cceec
Q psy13086 69 DPHFKRCKYKWRIINQNLLSEYAY-VLSEGGIVYTITDV---KDL-HDWIVSHFTEHP-LFVEC 126 (169)
Q Consensus 69 d~~f~~~h~~~~~~~~~~l~~~~r-vLkpGG~l~i~~d~---~~~-~~~~~~~~~~~~-~f~~~ 126 (169)
.|. ....+++++.| +|||||.|++.+-. ..+ ...+.+.+..++ .|...
T Consensus 161 ------~~~----~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 161 ------AHA----NTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp ------SCS----SHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred ------chH----hHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 111 13679999997 99999999985321 111 123445555666 66653
No 188
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.09 E-value=1.5e-10 Score=95.61 Aligned_cols=88 Identities=17% Similarity=0.033 Sum_probs=60.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c----ccceEEEeCCCC---cccc------cchh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L----YLKKMFFLYPDP---HFKR------CKYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~----~~d~v~~~f~d~---~f~~------~h~~ 78 (169)
..+|||||||+| ++..+|+.+++++|+ +.|++.|++++. . .+..+...+.++ .||. .|+.
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~ 262 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNW 262 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGGGS
T ss_pred CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEcccccCC
Confidence 679999999999 677789999999999 999999998764 1 222222222111 1332 1111
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
..-....++++++++|||||.+++.+..
T Consensus 263 ~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 263 PDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 1101147999999999999999987644
No 189
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.09 E-value=1.7e-10 Score=93.56 Aligned_cols=87 Identities=11% Similarity=0.067 Sum_probs=59.5
Q ss_pred CCeEEEEcCccc-------cc-CcCCCCcEEEEeCCHHHHHHHHHHhcc----ccceEEEeCCCC-----------ccc-
Q psy13086 18 KVEFVDVGCGKL-------YL-PMFPSTLILGLEIRVKVSDYVIDEWSL----YLKKMFFLYPDP-----------HFK- 73 (169)
Q Consensus 18 ~~~iLDiGCG~G-------la-~~~p~~~v~GiDis~~~l~~a~~~~~~----~~d~v~~~f~d~-----------~f~- 73 (169)
-..|||||||+| ++ ...|+++|+|||.|+.|++.|++++.. .+..+...+.++ .|+
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 368999999973 33 357999999999999999999988752 122222112211 111
Q ss_pred ----------ccchhhhcc-cHHHHHHHHHhccCCcEEEEEe
Q psy13086 74 ----------RCKYKWRII-NQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 74 ----------~~h~~~~~~-~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..||...-. ...++++++++|+|||.|++++
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 134443321 1479999999999999999984
No 190
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.08 E-value=1.7e-10 Score=87.31 Aligned_cols=30 Identities=20% Similarity=0.380 Sum_probs=25.8
Q ss_pred CCeEEEEcCccc-----ccCcCC--CCcEEEEeCCHH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP--STLILGLEIRVK 47 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p--~~~v~GiDis~~ 47 (169)
+.+|||||||+| ++.++| ..+++|+|+|+.
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 578999999999 666777 689999999983
No 191
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.07 E-value=9.8e-11 Score=92.23 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=33.6
Q ss_pred CCeEEEEcCccc-----ccCc--CCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL-----YLPM--FPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~--~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
..+|||+|||+| ++.. .+..+|+|+|+|+.|++.|++++.
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHH
Confidence 568999999999 5555 567899999999999999986543
No 192
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.07 E-value=1.1e-11 Score=96.72 Aligned_cols=76 Identities=14% Similarity=0.069 Sum_probs=52.3
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDP 70 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~ 70 (169)
++.+|||||||+| ++.. ..+|+|+|+|+.|++.|++++. .++|.|.+..+-.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 3689999999999 4444 4799999999999999987653 3455554432221
Q ss_pred cccccchhhhcccHHHHHHHHHhccCCcEEEE
Q psy13086 71 HFKRCKYKWRIINQNLLSEYAYVLSEGGIVYT 102 (169)
Q Consensus 71 ~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i 102 (169)
++.. ....+.+++++|+|||.+++
T Consensus 156 ~~~~--------~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 156 GPDY--------ATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp SGGG--------GGSSSBCTTTSCSSCHHHHH
T ss_pred Ccch--------hhhHHHHHHhhcCCcceeHH
Confidence 1111 11255678899999998655
No 193
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.06 E-value=5.6e-10 Score=95.77 Aligned_cols=111 Identities=15% Similarity=0.144 Sum_probs=69.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCC-CcEEEEeCCHHHHHHHHHHhc-----------------------cccceEEEeC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPS-TLILGLEIRVKVSDYVIDEWS-----------------------LYLKKMFFLY 67 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~-~~v~GiDis~~~l~~a~~~~~-----------------------~~~d~v~~~f 67 (169)
++.+|||+|||+| ++...++ ..++|+|+|+.+++.+++++. +++|.|.+.-
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~ 338 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDA 338 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEEC
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcC
Confidence 3679999999999 6666665 799999999999999988754 1133333211
Q ss_pred CCCcccccc------hhh------hc--ccHHHHHHHHHhccCCcEEEEEeC--ChHH-HHHHHHHHhcCCCceecC
Q psy13086 68 PDPHFKRCK------YKW------RI--INQNLLSEYAYVLSEGGIVYTITD--VKDL-HDWIVSHFTEHPLFVECD 127 (169)
Q Consensus 68 ~d~~f~~~h------~~~------~~--~~~~~l~~~~rvLkpGG~l~i~~d--~~~~-~~~~~~~~~~~~~f~~~~ 127 (169)
|-......+ +.+ .+ .+..+++++.++|||||.++++|- .+.. .......+..|+.|+..+
T Consensus 339 Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 339 PCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVP 415 (450)
T ss_dssp CCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCSSCEECC
T ss_pred CCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCCCCEEee
Confidence 100000000 000 00 125789999999999999998763 2211 222344456788887754
No 194
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.05 E-value=1.7e-10 Score=92.72 Aligned_cols=73 Identities=18% Similarity=0.147 Sum_probs=55.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----------------------cccceEEEeCCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----------------------LYLKKMFFLYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----------------------~~~d~v~~~f~d~ 70 (169)
..+|||||||+| +++. + .+++++|+++.|++.|+++++ +++|.|.+..++|
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~~dp 150 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQEPD 150 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESSCCC
T ss_pred CCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECCCCh
Confidence 478999999999 4455 6 899999999999999986542 1244444433332
Q ss_pred cccccchhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 71 HFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 71 ~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
..++++++++|||||.+++.+.
T Consensus 151 -------------~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 151 -------------IHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp -------------HHHHHHHHTTEEEEEEEEEEEE
T ss_pred -------------HHHHHHHHHhcCCCcEEEEEcC
Confidence 3489999999999999998753
No 195
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.05 E-value=8.2e-11 Score=95.27 Aligned_cols=39 Identities=5% Similarity=-0.035 Sum_probs=31.7
Q ss_pred CCeEEEEcCccc-----c----cCcCC----CCcEEEEeCCHHHHHHHHHHh
Q psy13086 18 KVEFVDVGCGKL-----Y----LPMFP----STLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 18 ~~~iLDiGCG~G-----l----a~~~p----~~~v~GiDis~~~l~~a~~~~ 56 (169)
..+|||+||||| + +...+ +.+|+|+|+|+.|++.|++++
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 468999999999 2 33323 468999999999999999864
No 196
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.05 E-value=1.9e-10 Score=96.54 Aligned_cols=80 Identities=15% Similarity=0.132 Sum_probs=52.9
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDP 70 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~ 70 (169)
++.+|||||||+| +++. ...+|+|||+| .|++.|++++. +++|.|..... .
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~-~ 139 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWM-G 139 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCC-B
T ss_pred CCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcCh-h
Confidence 3689999999999 3333 33499999999 99999987654 22333322100 0
Q ss_pred cccccchhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 71 HFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 71 ~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
++- . ..-....+++++.++|||||.+++.
T Consensus 140 ~~l--~--~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 140 YFL--L--RESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp TTB--T--TTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hcc--c--chHHHHHHHHHHHhhCCCCeEEEEe
Confidence 000 0 0001357899999999999999764
No 197
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.04 E-value=1.6e-11 Score=96.71 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=34.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
+.+|||||||+| ++...|+.+++|+|+|+.|++.|++++.
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~ 110 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVE 110 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHH
Confidence 578999999999 5566677899999999999999998754
No 198
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.04 E-value=3e-10 Score=94.10 Aligned_cols=83 Identities=20% Similarity=0.262 Sum_probs=52.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEE--------EeCCCCcccccchh---
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL-KKMF--------FLYPDPHFKRCKYK--- 78 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~--------~~f~d~~f~~~h~~--- 78 (169)
++.+|||||||+| +++. +..+|+|+|+|+ |++.|++++. ..+ +.+. +.+++..||..-..
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred CCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 3678999999999 3333 446999999996 9999988754 111 1111 11222233321100
Q ss_pred ----hhcccHHHHHHHHHhccCCcEEE
Q psy13086 79 ----WRIINQNLLSEYAYVLSEGGIVY 101 (169)
Q Consensus 79 ----~~~~~~~~l~~~~rvLkpGG~l~ 101 (169)
..-....+++++.++|||||.++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 00012578999999999999997
No 199
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.03 E-value=8.1e-10 Score=84.40 Aligned_cols=105 Identities=11% Similarity=0.072 Sum_probs=59.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHH-----------------HHHHHHhc----cccceEEEeCCCCc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVS-----------------DYVIDEWS----LYLKKMFFLYPDPH 71 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l-----------------~~a~~~~~----~~~d~v~~~f~d~~ 71 (169)
+.+|||+|||+| ++++ ...|+|||+++... +...+.+. +.+|.|...-+...
T Consensus 26 g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~ 103 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKV 103 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCC
T ss_pred CCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCC
Confidence 689999999999 5555 67999999997310 00011111 25666654322111
Q ss_pred cc---ccchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCceec
Q psy13086 72 FK---RCKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVEC 126 (169)
Q Consensus 72 f~---~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~~ 126 (169)
.. ..+....-....+++++.++|||||.|++......-...+...+..+ |..+
T Consensus 104 ~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~--F~~v 159 (191)
T 3dou_A 104 SGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN--FSSY 159 (191)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG--EEEE
T ss_pred CCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh--cCEE
Confidence 10 00111001135789999999999999998764333333355555443 5543
No 200
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.03 E-value=2.7e-10 Score=88.02 Aligned_cols=87 Identities=14% Similarity=0.184 Sum_probs=57.2
Q ss_pred CCCeEEEEcCccc-----ccCcC-----CCCcEEEEeCCHHHHHHHHHHhc-cc-----cceEEEeCCC-----------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-----PSTLILGLEIRVKVSDYVIDEWS-LY-----LKKMFFLYPD----------- 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-----p~~~v~GiDis~~~l~~a~~~~~-~~-----~d~v~~~f~d----------- 69 (169)
++.+|||||||+| ++... |..+|+|+|+|+.+++.|++++. .. .+.+.+...|
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 3679999999999 45443 56799999999999999998764 11 2223221111
Q ss_pred -CcccccchhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 70 -PHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 70 -~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
..||...... ....+++++.++|||||++++...
T Consensus 160 ~~~fD~I~~~~--~~~~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGA--SASELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECS--BBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECC--chHHHHHHHHHhcCCCcEEEEEEc
Confidence 1233221110 113457889999999999998753
No 201
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.02 E-value=1.4e-10 Score=84.82 Aligned_cols=101 Identities=11% Similarity=-0.007 Sum_probs=61.3
Q ss_pred CCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHH----------HH--------hc-cccceEEEeCCCCcc
Q psy13086 18 KVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVI----------DE--------WS-LYLKKMFFLYPDPHF 72 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~----------~~--------~~-~~~d~v~~~f~d~~f 72 (169)
+.+|||||||+| +++.+ |+.+++|+|+|+ |++..+ .. ++ +++|.|....+-.++
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~ 101 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMS 101 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCCcccc
Confidence 679999999999 55553 668999999998 654311 00 11 456766654332222
Q ss_pred cccc---hhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhc
Q psy13086 73 KRCK---YKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTE 119 (169)
Q Consensus 73 ~~~h---~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~ 119 (169)
.... ....-....+++++.++|||||.+++.+............+..
T Consensus 102 ~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~ 151 (180)
T 1ej0_A 102 GTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS 151 (180)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH
Confidence 1110 0000011579999999999999999976544333334444443
No 202
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.01 E-value=4.1e-09 Score=80.11 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=63.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----------------cccceEEEeCCCCcccc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----------------LYLKKMFFLYPDPHFKR 74 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----------------~~~d~v~~~f~d~~f~~ 74 (169)
++.+|||+|||+| ++.. ...+++|+|+|+.|++.|++++. .++|.|.+..| +.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p---~~- 123 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPP---FG- 123 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCC---CS-
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCC---Cc-
Confidence 3678999999999 4433 33489999999999999998753 23454443322 11
Q ss_pred cchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCcee
Q psy13086 75 CKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVE 125 (169)
Q Consensus 75 ~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~ 125 (169)
..++-....+++++.++| ||.+.+....+...+.....+.+++ |..
T Consensus 124 --~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g-~~~ 169 (207)
T 1wy7_A 124 --SQRKHADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHG-FVV 169 (207)
T ss_dssp --SSSTTTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTT-EEE
T ss_pred --cccCCchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCC-CeE
Confidence 111112357899999999 6655554445555666666666554 443
No 203
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.01 E-value=2.3e-10 Score=95.60 Aligned_cols=131 Identities=15% Similarity=0.038 Sum_probs=75.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcc--cc------cchhhhcccH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHF--KR------CKYKWRIINQ 84 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f--~~------~h~~~~~~~~ 84 (169)
..+|||||||+| +++.+|+.+++++|+ +.|++.|+++- .+..+...+.+|.+ |. .|+...-...
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~--~v~~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~ 280 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFS--GVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCL 280 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCT--TEEEEECCTTTCCCCCSEEEEESCGGGBCHHHHH
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcC--CCEEEecCCCCCCCCCCEEEEechhhcCCHHHHH
Confidence 689999999999 778899999999999 88998776421 11111111111111 21 1211110124
Q ss_pred HHHHHHHHhccCCcEEEEEeCCh------HHHHHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHHcCCCe
Q psy13086 85 NLLSEYAYVLSEGGIVYTITDVK------DLHDWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTRNKGEK 158 (169)
Q Consensus 85 ~~l~~~~rvLkpGG~l~i~~d~~------~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~g~~i 158 (169)
.+|++++++|||||++++..... ....+....+... .+.... + ...++..+++....+.|..+
T Consensus 281 ~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~-~~~~~~------~----g~~rt~~e~~~ll~~AGF~~ 349 (368)
T 3reo_A 281 KLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDAL-MLAYNP------G----GKERTEKEFQALAMASGFRG 349 (368)
T ss_dssp HHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHH-HHHHSS------B----CCCCCHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHH-HHhhcC------C----CccCCHHHHHHHHHHCCCee
Confidence 68999999999999999975321 1111110000000 000000 0 12355678899999999998
Q ss_pred EEEE
Q psy13086 159 FCAV 162 (169)
Q Consensus 159 ~~~~ 162 (169)
.++.
T Consensus 350 v~~~ 353 (368)
T 3reo_A 350 FKVA 353 (368)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 6654
No 204
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.01 E-value=7.9e-10 Score=87.17 Aligned_cols=102 Identities=12% Similarity=0.007 Sum_probs=67.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccc-eEEEeCCCC--------cccccch--hhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLK-KMFFLYPDP--------HFKRCKY--KWR 80 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d-~v~~~f~d~--------~f~~~h~--~~~ 80 (169)
+.+|||||||+| ++...|..+|+|+|+++.+++.|++|+. ..++ .+.+...|- .||..-. .-.
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~Gg 95 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGMGG 95 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCCCh
Confidence 578999999999 6677788899999999999999999876 2332 233322221 2332100 000
Q ss_pred cccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCC
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHP 121 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~ 121 (169)
-+...++.+....|+|+|.|+++.... ....++.+.+++
T Consensus 96 ~~i~~Il~~~~~~L~~~~~lVlq~~~~--~~~vr~~L~~~G 134 (225)
T 3kr9_A 96 RLIARILEEGLGKLANVERLILQPNNR--EDDLRIWLQDHG 134 (225)
T ss_dssp HHHHHHHHHTGGGCTTCCEEEEEESSC--HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCCC--HHHHHHHHHHCC
Confidence 013578999999999999999976432 222444444453
No 205
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.00 E-value=1.9e-10 Score=89.22 Aligned_cols=87 Identities=16% Similarity=0.261 Sum_probs=56.3
Q ss_pred CCCeEEEEcCccc-----ccCcCC------CCcEEEEeCCHHHHHHHHHHhcc-c-----cceEEEe-------CCC-Cc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFP------STLILGLEIRVKVSDYVIDEWSL-Y-----LKKMFFL-------YPD-PH 71 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p------~~~v~GiDis~~~l~~a~~~~~~-~-----~d~v~~~-------f~d-~~ 71 (169)
++.+|||||||+| ++...+ ..+|+|+|+++.+++.|++++.. . .+.+.+. +++ ..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 163 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAP 163 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGGCS
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcCCC
Confidence 3679999999999 444433 36999999999999999887541 1 2222221 111 22
Q ss_pred ccccchhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 72 FKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 72 f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
||...... ....+++++.++|||||++++...
T Consensus 164 fD~I~~~~--~~~~~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 164 YNAIHVGA--AAPDTPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp EEEEEECS--CBSSCCHHHHHTEEEEEEEEEEES
T ss_pred ccEEEECC--chHHHHHHHHHHhcCCCEEEEEEe
Confidence 33221110 112355889999999999999764
No 206
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.00 E-value=5.5e-10 Score=91.98 Aligned_cols=83 Identities=16% Similarity=0.277 Sum_probs=52.5
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cc----cceEE-----EeCCCCcccccchh----
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LY----LKKMF-----FLYPDPHFKRCKYK---- 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~----~d~v~-----~~f~d~~f~~~h~~---- 78 (169)
+.+|||||||+| +++. +..+|+|+|+| .|++.|++++. .. +..+. +.+++..||.....
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 578999999999 3333 45699999999 69999987754 11 11111 11222233321100
Q ss_pred ---hhcccHHHHHHHHHhccCCcEEEE
Q psy13086 79 ---WRIINQNLLSEYAYVLSEGGIVYT 102 (169)
Q Consensus 79 ---~~~~~~~~l~~~~rvLkpGG~l~i 102 (169)
..-....++.++.++|||||.++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 001135789999999999999973
No 207
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.98 E-value=4.6e-09 Score=87.26 Aligned_cols=126 Identities=15% Similarity=0.095 Sum_probs=78.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEE---e-CCCCc--ccc------cchhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFF---L-YPDPH--FKR------CKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~---~-f~d~~--f~~------~h~~~ 79 (169)
..+|||||||+| +++++|+.+++..|. +.+++.|++++. ...+.|.+ . |.+|. .|. .|.-.
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~~~ 258 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHDWA 258 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGGSC
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeeeecccCC
Confidence 578999999999 888999999999997 889999998765 22233332 1 22222 221 12111
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEeCC-------hHHHHHH-HHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHH
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTITDV-------KDLHDWI-VSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKV 151 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~d~-------~~~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~ 151 (169)
.-....+|++++++|+|||+++|.... +.....+ ...+...+ -..++..+|+...
T Consensus 259 d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~-----------------g~ert~~e~~~ll 321 (353)
T 4a6d_A 259 DGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTE-----------------GQERTPTHYHMLL 321 (353)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSS-----------------CCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCC-----------------CcCCCHHHHHHHH
Confidence 101246899999999999999997532 1111111 11111111 1235677889999
Q ss_pred HHcCCCeEEE
Q psy13086 152 TRNKGEKFCA 161 (169)
Q Consensus 152 ~~~g~~i~~~ 161 (169)
.+.|....++
T Consensus 322 ~~AGf~~v~v 331 (353)
T 4a6d_A 322 SSAGFRDFQF 331 (353)
T ss_dssp HHHTCEEEEE
T ss_pred HHCCCceEEE
Confidence 9999887654
No 208
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.98 E-value=3.9e-10 Score=93.57 Aligned_cols=86 Identities=12% Similarity=0.035 Sum_probs=51.9
Q ss_pred CCCeEEEEcCccc----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cc----cceEEEeCCC----Cccccc------ch
Q psy13086 17 KKVEFVDVGCGKL----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LY----LKKMFFLYPD----PHFKRC------KY 77 (169)
Q Consensus 17 ~~~~iLDiGCG~G----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~----~d~v~~~f~d----~~f~~~------h~ 77 (169)
++.+|||||||+| .+...+..+|+|+|+|+ |++.|++++. .. +..+...+.+ ..||.. ++
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~~ 128 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYM 128 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBTT
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchhc
Confidence 3679999999999 22233556999999996 8898887654 11 1111111111 112211 11
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
...-.....+.++.++|||||.+++.
T Consensus 129 ~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 129 LFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 00001246788899999999999864
No 209
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.98 E-value=1.3e-09 Score=93.99 Aligned_cols=110 Identities=14% Similarity=0.096 Sum_probs=68.1
Q ss_pred CCCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc----------------------cccceEEEeCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS----------------------LYLKKMFFLYP 68 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~----------------------~~~d~v~~~f~ 68 (169)
++.+|||+|||+| +|...+ ...|+|+|+|+.+++.+++|+. +++|.|.+.-|
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaP 184 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAP 184 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCC
Confidence 4689999999999 665544 4699999999999999987654 34566554322
Q ss_pred CC---cc----ccc-----chhhh--cccHHHHHHHHHhccCCcEEEEEeC--ChHHH-HHHHHHHhcCCCceecC
Q psy13086 69 DP---HF----KRC-----KYKWR--IINQNLLSEYAYVLSEGGIVYTITD--VKDLH-DWIVSHFTEHPLFVECD 127 (169)
Q Consensus 69 d~---~f----~~~-----h~~~~--~~~~~~l~~~~rvLkpGG~l~i~~d--~~~~~-~~~~~~~~~~~~f~~~~ 127 (169)
-. .+ +.. ..... -.+.++++++.++|||||+|+.+|- .+... .-....+..++ |+..+
T Consensus 185 CSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~-~~l~~ 259 (456)
T 3m4x_A 185 CSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYP-VTIEE 259 (456)
T ss_dssp CCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSS-EEEEC
T ss_pred CCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCC-CEEEe
Confidence 00 00 000 00000 0134789999999999999998752 22211 11223344566 66554
No 210
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.98 E-value=2.6e-09 Score=86.15 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=63.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccc--eEEEeCCC----Cccc------ccchhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLK--KMFFLYPD----PHFK------RCKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d--~v~~~f~d----~~f~------~~h~~~ 79 (169)
..+|||||||+| ++...|.++++|+|+++.|++.+++++. ..+. .....+.. ..+| ..|+..
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~Le 212 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPCLE 212 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHHHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHHhh
Confidence 578999999999 3445688999999999999999998875 1111 11111211 1122 223222
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEeCC-----------hHHHHHHHHHHhcCC
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTITDV-----------KDLHDWIVSHFTEHP 121 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~d~-----------~~~~~~~~~~~~~~~ 121 (169)
+--....+ ++...|+|+|.++-. |. +.|..++.+.+.+.+
T Consensus 213 ~q~kg~g~-~ll~aL~~~~vvVSf-p~ksl~Grs~gm~~~Y~~~~e~~~~~~g 263 (281)
T 3lcv_B 213 TQQRGSGW-EVIDIVNSPNIVVTF-PTKSLGQRSKGMFQNYSQSFESQARERS 263 (281)
T ss_dssp HHSTTHHH-HHHHHSSCSEEEEEE-ECC-------CHHHHHHHHHHHHHHHHT
T ss_pred hhhhHHHH-HHHHHhCCCCEEEec-cchhhcCCCcchhhHHHHHHHHHHHhcC
Confidence 11123455 899999999998653 22 346666666665444
No 211
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.97 E-value=1.9e-09 Score=93.46 Aligned_cols=88 Identities=15% Similarity=0.114 Sum_probs=59.3
Q ss_pred CCCeEEEEcCccc-----ccCcCC-CCcEEEEeCCHHHHHHHHHHhc----------------------cccceEEEeCC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFP-STLILGLEIRVKVSDYVIDEWS----------------------LYLKKMFFLYP 68 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p-~~~v~GiDis~~~l~~a~~~~~----------------------~~~d~v~~~f~ 68 (169)
++.+|||+|||+| +|...+ ...|+|+|+|+.+++.+++++. .++|.|.+.-|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 3689999999999 666654 5799999999999999987753 23555544211
Q ss_pred CC---cc----ccc-chhh----hc--ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 69 DP---HF----KRC-KYKW----RI--INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 69 d~---~f----~~~-h~~~----~~--~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
-. .+ +.. ++.. .+ .+..+|+++.++|||||+|+++|
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 00 00 000 0000 00 13578999999999999999976
No 212
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.97 E-value=1.5e-09 Score=89.84 Aligned_cols=81 Identities=10% Similarity=-0.006 Sum_probs=55.3
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------------cccceEEE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------------LYLKKMFF 65 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------------~~~d~v~~ 65 (169)
+.+|||+|||+| ++.. +++|+|||+|+.|++.|++++. ..+|.|.+
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~--ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAA--GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCcEEEcccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 578999999999 3333 4599999999999999987643 13454443
Q ss_pred eCCCCccccc------chhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 66 LYPDPHFKRC------KYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 66 ~f~d~~f~~~------h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.- |.|... +... ....+++++.++|||||.|++.+
T Consensus 232 dP--P~~~~~~~~~~~~~~~--~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 232 DP--PKFGRGTHGEVWQLFD--HLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp CC--CSEEECTTCCEEEHHH--HHHHHHHHHHHTBCTTCCEEEEE
T ss_pred CC--ccccCCchHHHHHHHH--HHHHHHHHHHHhcCcCcEEEEEE
Confidence 21 212110 1111 12578999999999999977764
No 213
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.96 E-value=1.2e-09 Score=82.13 Aligned_cols=87 Identities=13% Similarity=0.058 Sum_probs=53.6
Q ss_pred CCeEEEEcCccc-----ccCcCCC---------CcEEEEeCCHHH-HHHH----H-------------HHhc-cccceEE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPS---------TLILGLEIRVKV-SDYV----I-------------DEWS-LYLKKMF 64 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~---------~~v~GiDis~~~-l~~a----~-------------~~~~-~~~d~v~ 64 (169)
+.+|||||||+| +++..+. .+++|+|+|+.+ +..+ . +.++ .++|.|.
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~ 102 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADVIL 102 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEE
Confidence 679999999999 6666554 799999999843 1110 0 0011 3567666
Q ss_pred EeCCCCcccccchhhh-----cccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 65 FLYPDPHFKRCKYKWR-----IINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 65 ~~f~d~~f~~~h~~~~-----~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
...+..+. .++... -....+++++.++|||||.|++.+..
T Consensus 103 ~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 103 SDMAPNAT--GFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp ECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eCCCCCCC--CCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 53321110 011000 01147899999999999999998643
No 214
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.95 E-value=2.4e-09 Score=84.70 Aligned_cols=102 Identities=12% Similarity=0.040 Sum_probs=66.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEeCCC--------Ccccccc--hhhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL-KKMFFLYPD--------PHFKRCK--YKWR 80 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~f~d--------~~f~~~h--~~~~ 80 (169)
+.+|||||||+| ++...|..+|+|+|+++.+++.|++|+. ..+ +.+.+...| ..||..- -.-.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg 101 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGG 101 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCch
Confidence 678999999999 6666677899999999999999999876 222 223322111 1233210 0000
Q ss_pred cccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCC
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHP 121 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~ 121 (169)
-....++.+..+.|+++|.|+++.... ....++.+.+++
T Consensus 102 ~lI~~IL~~~~~~l~~~~~lIlqp~~~--~~~lr~~L~~~G 140 (230)
T 3lec_A 102 RLIADILNNDIDKLQHVKTLVLQPNNR--EDDLRKWLAAND 140 (230)
T ss_dssp HHHHHHHHHTGGGGTTCCEEEEEESSC--HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCcCCEEEEECCCC--hHHHHHHHHHCC
Confidence 013568888999999999999986443 233444444443
No 215
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.95 E-value=7.8e-10 Score=84.62 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=58.0
Q ss_pred CCeEEEEcCccc-ccCcCCCCcEEEEeCCHHHHHHHHHH---hc---cccceEEEeCCCCcccccchhhhcccHHHHHHH
Q psy13086 18 KVEFVDVGCGKL-YLPMFPSTLILGLEIRVKVSDYVIDE---WS---LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEY 90 (169)
Q Consensus 18 ~~~iLDiGCG~G-la~~~p~~~v~GiDis~~~l~~a~~~---~~---~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~ 90 (169)
..+|||||||+| ++... ..+++|+|+|+..+...... ++ +++|.|.+.+.- |+. ....+++++
T Consensus 68 ~~~vLDiG~G~G~~~~~l-~~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l------~~~---~~~~~l~~~ 137 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSI-RNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSL------MGT---NIRDFLEEA 137 (215)
T ss_dssp TSCEEEETCTTCHHHHHC-CSCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCC------CSS---CHHHHHHHH
T ss_pred CCeEEEECCcCCHHHHHh-hccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhc------ccc---CHHHHHHHH
Confidence 578999999999 44333 26999999998711110000 00 345655543221 111 136899999
Q ss_pred HHhccCCcEEEEEeCChHH--HHHHHHHHhcCCCcee
Q psy13086 91 AYVLSEGGIVYTITDVKDL--HDWIVSHFTEHPLFVE 125 (169)
Q Consensus 91 ~rvLkpGG~l~i~~d~~~~--~~~~~~~~~~~~~f~~ 125 (169)
+++|||||.+++.+....+ ...+...+... +|+.
T Consensus 138 ~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~-Gf~~ 173 (215)
T 2zfu_A 138 NRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKL-GFKI 173 (215)
T ss_dssp HHHEEEEEEEEEEECGGGCSCHHHHHHHHHHT-TEEE
T ss_pred HHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHC-CCEE
Confidence 9999999999997644321 23334444443 3544
No 216
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.95 E-value=5.4e-10 Score=93.24 Aligned_cols=127 Identities=12% Similarity=-0.047 Sum_probs=75.3
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcc--cc------cchhhhcccH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHF--KR------CKYKWRIINQ 84 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f--~~------~h~~~~~~~~ 84 (169)
..+|||||||+| +++.+|+.+++++|+ +.|++.|+++- .+..+...+.+|.+ |. .|+...-...
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~--~v~~~~~D~~~~~p~~D~v~~~~vlh~~~d~~~~ 278 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFP--GVTHVGGDMFKEVPSGDTILMKWILHDWSDQHCA 278 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCT--TEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcC--CeEEEeCCcCCCCCCCCEEEehHHhccCCHHHHH
Confidence 689999999999 778899999999999 88988776421 11111111111111 11 1211100124
Q ss_pred HHHHHHHHhccCCcEEEEEeCCh------HHHHHH---HH--HHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHH
Q psy13086 85 NLLSEYAYVLSEGGIVYTITDVK------DLHDWI---VS--HFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTR 153 (169)
Q Consensus 85 ~~l~~~~rvLkpGG~l~i~~d~~------~~~~~~---~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~ 153 (169)
.+|++++++|||||++++..... ...... .. .+...+ + ...++..+|+....+
T Consensus 279 ~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~------------~----g~~rt~~e~~~ll~~ 342 (364)
T 3p9c_A 279 TLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNP------------G----GRERYEREFQALARG 342 (364)
T ss_dssp HHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCS------------S----CCCCBHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhccc------------C----CccCCHHHHHHHHHH
Confidence 78999999999999999975321 111100 11 110000 0 122456678999999
Q ss_pred cCCCeEEEEE
Q psy13086 154 NKGEKFCAVF 163 (169)
Q Consensus 154 ~g~~i~~~~~ 163 (169)
.|..+.++.-
T Consensus 343 AGF~~v~~~~ 352 (364)
T 3p9c_A 343 AGFTGVKSTY 352 (364)
T ss_dssp TTCCEEEEEE
T ss_pred CCCceEEEEE
Confidence 9999876653
No 217
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.95 E-value=1.9e-09 Score=85.98 Aligned_cols=98 Identities=10% Similarity=0.047 Sum_probs=64.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEeCCC--------Ccccccchh--hh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL-KKMFFLYPD--------PHFKRCKYK--WR 80 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~f~d--------~~f~~~h~~--~~ 80 (169)
+.+|||||||+| ++...|...|+|+|+++.+++.|++|+. ..+ +.+.+...| ..||..-.. -.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg 101 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG 101 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCch
Confidence 578999999999 6666777899999999999999999876 222 223322111 113321000 00
Q ss_pred cccHHHHHHHHHhccCCcEEEEEeCC--hHHHHHHHH
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTITDV--KDLHDWIVS 115 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~d~--~~~~~~~~~ 115 (169)
-+...++.+..+.|+++|.|+++... +....|+.+
T Consensus 102 ~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~ 138 (244)
T 3gnl_A 102 TLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQ 138 (244)
T ss_dssp HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHH
Confidence 01356899999999999999998643 233444443
No 218
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.95 E-value=2.9e-09 Score=89.19 Aligned_cols=40 Identities=20% Similarity=-0.060 Sum_probs=33.8
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
+.+|||+|||+| ++...+..+++|+|+|+.|++.|++++.
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~ 262 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNAL 262 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHH
Confidence 678999999999 5555555699999999999999998753
No 219
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.93 E-value=8.5e-10 Score=91.15 Aligned_cols=126 Identities=17% Similarity=-0.000 Sum_probs=72.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----cccceEEEeC--CCCcccc------cchhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-----LYLKKMFFLY--PDPHFKR------CKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-----~~~d~v~~~f--~d~~f~~------~h~~~ 79 (169)
..+|||||||+| +++.+|+.+++++|++ .++. ++++. ..+..+...+ +-|.||. .|+..
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~ 261 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWG 261 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEESCGGGSC
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCCCCCCCcEEEEehhccCCC
Confidence 679999999999 7778899999999994 4544 22221 1122221112 1123442 12211
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEeCCh------HHHHHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHH
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTITDVK------DLHDWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTR 153 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~d~~------~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~ 153 (169)
......++++++++|||||+|++.+... .+..++.-.+.... . ...++..+++....+
T Consensus 262 d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~------------~----~~~~t~~e~~~ll~~ 325 (348)
T 3lst_A 262 DEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAAR------------T----GQERTAAELEPLFTA 325 (348)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTT------------S----CCCCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcC------------C----CcCCCHHHHHHHHHH
Confidence 1112479999999999999999975321 11111110111000 0 123556788888999
Q ss_pred cCCCeEEEE
Q psy13086 154 NKGEKFCAV 162 (169)
Q Consensus 154 ~g~~i~~~~ 162 (169)
.|..+..+.
T Consensus 326 aGf~~~~~~ 334 (348)
T 3lst_A 326 AGLRLDRVV 334 (348)
T ss_dssp TTEEEEEEE
T ss_pred CCCceEEEE
Confidence 998775543
No 220
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.92 E-value=4.7e-09 Score=84.49 Aligned_cols=84 Identities=7% Similarity=0.093 Sum_probs=55.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeC-CHHHHHHHHHHh-----c-cccc-----eEEE---eC----------
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEI-RVKVSDYVIDEW-----S-LYLK-----KMFF---LY---------- 67 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDi-s~~~l~~a~~~~-----~-~~~d-----~v~~---~f---------- 67 (169)
+.+|||||||+| ++.. ...+|+|+|+ |+.|++.|++++ . ..++ .+.+ ..
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 578999999999 3333 3348999999 899999999887 3 1111 2221 11
Q ss_pred -CCCccccc------chhhhcccHHHHHHHHHhcc---C--CcEEEEEe
Q psy13086 68 -PDPHFKRC------KYKWRIINQNLLSEYAYVLS---E--GGIVYTIT 104 (169)
Q Consensus 68 -~d~~f~~~------h~~~~~~~~~~l~~~~rvLk---p--GG~l~i~~ 104 (169)
++..||.. ++.. ....+++.+.++|| | ||.+++..
T Consensus 159 ~~~~~fD~Ii~~dvl~~~~--~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFHQ--AHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HSCSSBSEEEEESCCSCGG--GHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred ccCCCCCEEEEeCcccChH--HHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 12334431 1111 13679999999999 9 99987764
No 221
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.92 E-value=1.9e-09 Score=91.30 Aligned_cols=84 Identities=11% Similarity=0.017 Sum_probs=57.3
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCCc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDPH 71 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~~ 71 (169)
+.+|||+||||| ++.. ++.|+|+|+|+.|++.|++|+. +.+|.|.+. .|.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~d--pP~ 290 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLD--PPT 290 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEEC--CCC
T ss_pred CCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEEC--CCc
Confidence 689999999999 3333 4569999999999999998753 125555443 222
Q ss_pred cccc-chhhhc--ccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 72 FKRC-KYKWRI--INQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 72 f~~~-h~~~~~--~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
|... ...... ....+++.+.++|||||.|++.+.
T Consensus 291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 3211 000000 125789999999999999997764
No 222
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.92 E-value=7.1e-10 Score=91.69 Aligned_cols=84 Identities=17% Similarity=0.074 Sum_probs=56.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeC--CCCcccc------cchhhhcccH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLY--PDPHFKR------CKYKWRIINQ 84 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f--~d~~f~~------~h~~~~~~~~ 84 (169)
..+|||||||+| +++.+|+.+++|+|+ +.|++.|++. + .+..+...+ +-|.||. .|+.......
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~-~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~~ 265 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-N-NLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCL 265 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-T-TEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHH
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-C-CcEEEeccccCCCCCccEEEeehhhccCCHHHHH
Confidence 579999999999 777889999999999 9999888642 1 111111111 1112332 1221111123
Q ss_pred HHHHHHHHhccC---CcEEEEEe
Q psy13086 85 NLLSEYAYVLSE---GGIVYTIT 104 (169)
Q Consensus 85 ~~l~~~~rvLkp---GG~l~i~~ 104 (169)
.++++++++||| ||++++..
T Consensus 266 ~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 266 RILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp HHHHHHHHHHSGGGCCCEEEEEE
T ss_pred HHHHHHHHhCCCCCCCcEEEEEE
Confidence 799999999999 99999875
No 223
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.91 E-value=5.1e-10 Score=93.28 Aligned_cols=84 Identities=19% Similarity=0.133 Sum_probs=55.5
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCC--CCcccc------cchhhhcccH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYP--DPHFKR------CKYKWRIINQ 84 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~--d~~f~~------~h~~~~~~~~ 84 (169)
..+|||||||+| +++++|+.+++++|+ +.|++.|++. + .+..+...+. -|.+|. .|+.......
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~-~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~ 286 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-S-GIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCI 286 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-T-TEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-C-CCEEEeCCcccCCCCCCEEEEecccccCCHHHHH
Confidence 679999999999 777889999999999 9999887642 1 1111111111 111332 1221111123
Q ss_pred HHHHHHHHhccCCcEEEEEe
Q psy13086 85 NLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 85 ~~l~~~~rvLkpGG~l~i~~ 104 (169)
.++++++++|||||++++.+
T Consensus 287 ~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 287 EFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 79999999999999999873
No 224
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.91 E-value=1.8e-09 Score=89.31 Aligned_cols=76 Identities=14% Similarity=0.175 Sum_probs=55.7
Q ss_pred CCCeEEEEcCccc---ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c------------------ccceEEEeCCCCcccc
Q psy13086 17 KKVEFVDVGCGKL---YLPMFPSTLILGLEIRVKVSDYVIDEWS-L------------------YLKKMFFLYPDPHFKR 74 (169)
Q Consensus 17 ~~~~iLDiGCG~G---la~~~p~~~v~GiDis~~~l~~a~~~~~-~------------------~~d~v~~~f~d~~f~~ 74 (169)
++.+|||+|||+| +. .....+|+|+|+|+.+++.|++|+. . .+|.|.+.. |.+
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dp--P~~-- 269 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNL--PKF-- 269 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECC--TTT--
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECC--cHh--
Confidence 3679999999999 44 3356799999999999999998764 1 233333211 111
Q ss_pred cchhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 75 CKYKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 75 ~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
...+++++.++|+|||.+++.+.
T Consensus 270 --------~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 270 --------AHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp --------GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred --------HHHHHHHHHHHcCCCCEEEEEEe
Confidence 13689999999999999988753
No 225
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.89 E-value=8.3e-09 Score=78.20 Aligned_cols=92 Identities=11% Similarity=0.134 Sum_probs=56.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------cccceEEEeCCCCcccccchhh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------LYLKKMFFLYPDPHFKRCKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------------~~~d~v~~~f~d~~f~~~h~~~ 79 (169)
+.+|||+|||+| ++.. +..+++|+|+|+.|++.|++++. .++|.|.+..|-.+. +
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~------~ 124 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPPFGSV------V 124 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCCC----------
T ss_pred CCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCeeEEEECCCchhc------c
Confidence 678999999999 3333 44579999999999999998752 245555443221111 1
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcC
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEH 120 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~ 120 (169)
.-....+++++.++| |+ +++..+... ..+..+.+...
T Consensus 125 ~~~~~~~l~~~~~~~--g~-~~~~~~~~~-~~~~~~~~~~~ 161 (200)
T 1ne2_A 125 KHSDRAFIDKAFETS--MW-IYSIGNAKA-RDFLRREFSAR 161 (200)
T ss_dssp ---CHHHHHHHHHHE--EE-EEEEEEGGG-HHHHHHHHHHH
T ss_pred CchhHHHHHHHHHhc--Cc-EEEEEcCch-HHHHHHHHHHC
Confidence 112357899999998 44 555443322 34444544443
No 226
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.88 E-value=4.4e-09 Score=88.57 Aligned_cols=87 Identities=11% Similarity=0.127 Sum_probs=56.3
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c--------------------------ccceEEE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L--------------------------YLKKMFF 65 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~--------------------------~~d~v~~ 65 (169)
+.+|||+|||+| +|.. ...+|+|||+|+.|++.|++|+. . ++|.|.+
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 678999999999 3332 23489999999999999987653 1 3444433
Q ss_pred eCCCCccccc-chhhhc--ccHHHHHHHHHhccCCcEEEEEeCCh
Q psy13086 66 LYPDPHFKRC-KYKWRI--INQNLLSEYAYVLSEGGIVYTITDVK 107 (169)
Q Consensus 66 ~f~d~~f~~~-h~~~~~--~~~~~l~~~~rvLkpGG~l~i~~d~~ 107 (169)
. .|.+... ...... ...++++++.++|+|||.+++++...
T Consensus 292 D--PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 292 D--PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp C--CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred C--CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 2 1222100 000000 12457888899999999999987543
No 227
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.88 E-value=1.4e-09 Score=88.20 Aligned_cols=75 Identities=9% Similarity=0.173 Sum_probs=54.4
Q ss_pred CCCeEEEEcCccc----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCCc
Q psy13086 17 KKVEFVDVGCGKL----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDPH 71 (169)
Q Consensus 17 ~~~~iLDiGCG~G----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~~ 71 (169)
++.+|||+|||+| .+.....++|+++|+|+.+++.+++|+. ..+|.|.+..|..
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~~- 203 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVR- 203 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSS-
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCCc-
Confidence 3689999999999 2223355799999999999999998865 2233333332210
Q ss_pred ccccchhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 72 FKRCKYKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 72 f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
...++..+.++|||||.+++-
T Consensus 204 -----------~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 204 -----------THEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp -----------GGGGHHHHHHHEEEEEEEEEE
T ss_pred -----------HHHHHHHHHHHcCCCCEEEEE
Confidence 246888889999999998764
No 228
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.86 E-value=2.4e-09 Score=90.31 Aligned_cols=84 Identities=15% Similarity=0.216 Sum_probs=51.0
Q ss_pred CCCeEEEEcCccc----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEEe--------CCCCcccccch-----
Q psy13086 17 KKVEFVDVGCGKL----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL-KKMFFL--------YPDPHFKRCKY----- 77 (169)
Q Consensus 17 ~~~~iLDiGCG~G----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~~--------f~d~~f~~~h~----- 77 (169)
++.+||||||||| +|.+....+|+|||.|+ |++.|++.+. +.+ +.|.+. .|. .+|..-.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe-~~DvivsE~~~~ 160 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPE-QVDAIVSEWMGY 160 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSS-CEEEEECCCCBT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCc-cccEEEeecccc
Confidence 3678999999999 44444445899999995 8888887654 111 112111 111 1111000
Q ss_pred --hhhcccHHHHHHHHHhccCCcEEEE
Q psy13086 78 --KWRIINQNLLSEYAYVLSEGGIVYT 102 (169)
Q Consensus 78 --~~~~~~~~~l~~~~rvLkpGG~l~i 102 (169)
...-..+.++....|.|||||.++.
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccchhhhHHHHHHhhCCCCceECC
Confidence 0000236788888999999998854
No 229
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.85 E-value=4.7e-09 Score=88.31 Aligned_cols=87 Identities=13% Similarity=0.015 Sum_probs=58.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------------------cccceEEE
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------------------LYLKKMFF 65 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--------------------------~~~d~v~~ 65 (169)
++.+|||+|||+| ++.. +..+|+|+|+|+.+++.|++++. .++|.|.+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 3689999999999 4433 34599999999999999987643 13444443
Q ss_pred eCCCCccccc-chhhh--cccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 66 LYPDPHFKRC-KYKWR--IINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 66 ~f~d~~f~~~-h~~~~--~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
.- |.|... ..... -....++.++.++|+|||.+++++..
T Consensus 296 dp--P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DP--PAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CC--CCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CC--CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 21 222110 00000 01357899999999999999988654
No 230
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.85 E-value=2.7e-09 Score=89.54 Aligned_cols=85 Identities=14% Similarity=0.008 Sum_probs=58.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------------cccceEEEeC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------------------LYLKKMFFLY 67 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-------------------------~~~d~v~~~f 67 (169)
+.+|||+|||+| ++.. ..+|+|+|+|+.+++.|++++. .++|.|.+.-
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 568999999999 4444 5689999999999999988743 1345544321
Q ss_pred CCCccccc-chhhh--cccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 68 PDPHFKRC-KYKWR--IINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 68 ~d~~f~~~-h~~~~--~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
|.|... ..... -....+++++.++|+|||.+++++..
T Consensus 288 --P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 288 --PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp --CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 222110 00000 01256899999999999999998754
No 231
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.85 E-value=7.3e-10 Score=94.26 Aligned_cols=77 Identities=16% Similarity=0.091 Sum_probs=52.3
Q ss_pred CCeEEEEcCc------cc-----ccC-cCCCCcEEEEeCCHHHHHHHHHHhc-------------------cccceEEEe
Q psy13086 18 KVEFVDVGCG------KL-----YLP-MFPSTLILGLEIRVKVSDYVIDEWS-------------------LYLKKMFFL 66 (169)
Q Consensus 18 ~~~iLDiGCG------~G-----la~-~~p~~~v~GiDis~~~l~~a~~~~~-------------------~~~d~v~~~ 66 (169)
..+||||||| +| ++. .+|+.+|+|||+|+.|... ..++. +++|.|...
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~-~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisd 295 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVD-ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDD 295 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGC-BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhc-CCCcEEEEecccccchhhhhhcccCCccEEEEC
Confidence 6799999999 55 444 4689999999999998421 11111 345555431
Q ss_pred CCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 67 YPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 67 f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
. .|+... ...+|++++|+|||||.|++.+
T Consensus 296 g-------sH~~~d--~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 296 G-------SHINAH--VRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp S-------CCCHHH--HHHHHHHHGGGEEEEEEEEEEC
T ss_pred C-------cccchh--HHHHHHHHHHhcCCCeEEEEEe
Confidence 1 122111 2579999999999999999863
No 232
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.84 E-value=9.6e-10 Score=95.30 Aligned_cols=84 Identities=12% Similarity=0.093 Sum_probs=51.9
Q ss_pred CCeEEEEcCccc----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-ccc-ceEEE---eCCC----Ccccccc------hh
Q psy13086 18 KVEFVDVGCGKL----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYL-KKMFF---LYPD----PHFKRCK------YK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~-d~v~~---~f~d----~~f~~~h------~~ 78 (169)
+.+|||||||+| .+...+..+|+|+|+|+ |++.|++++. ..+ +.+.+ .+.+ ..||..- +.
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~~~ 237 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYML 237 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHHHH
T ss_pred CCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchHhc
Confidence 579999999999 22235667999999998 9999987754 111 11221 1111 1233211 00
Q ss_pred hhcccHHHHHHHHHhccCCcEEEE
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYT 102 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i 102 (169)
..-.....+.+++++|||||.+++
T Consensus 238 ~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 238 FNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp TCHHHHHHHHHGGGGEEEEEEEES
T ss_pred CcHHHHHHHHHHHHhcCCCCEEEE
Confidence 000013567788999999999985
No 233
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.83 E-value=6.7e-10 Score=89.88 Aligned_cols=82 Identities=10% Similarity=-0.037 Sum_probs=48.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHH----------hc-------------cccceEEEeCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDE----------WS-------------LYLKKMFFLYPD 69 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~----------~~-------------~~~d~v~~~f~d 69 (169)
+.+|||||||+| +++. .+|+|||+|+ |+..|+++ +. .++|.|...+.
T Consensus 83 g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~~- 157 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDIG- 157 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECCC-
T ss_pred CCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECCC-
Confidence 678999999999 5555 6999999998 64433221 11 22333333222
Q ss_pred CcccccchhhhcccHHHHHHHHHhccCCc--EEEEEeC
Q psy13086 70 PHFKRCKYKWRIINQNLLSEYAYVLSEGG--IVYTITD 105 (169)
Q Consensus 70 ~~f~~~h~~~~~~~~~~l~~~~rvLkpGG--~l~i~~d 105 (169)
... ..+.....-...+++++.++||||| .|++...
T Consensus 158 ~~~-~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 158 ESN-PTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CCC-SCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred cCC-CchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 000 0000000000137899999999999 9988653
No 234
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.81 E-value=1.9e-08 Score=85.85 Aligned_cols=92 Identities=11% Similarity=0.044 Sum_probs=57.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEEeCCC------Ccccccch--hhhccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFLYPD------PHFKRCKY--KWRIIN 83 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~f~d------~~f~~~h~--~~~~~~ 83 (169)
+.+|||+|||+| +|.. ..+|+|+|+|+.|++.|++++. ..++ +.+...| ..||..-. -+.-..
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~g~~ 367 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRAGLH 367 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTTCSC
T ss_pred CCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCccchH
Confidence 678999999999 4443 4699999999999999998765 2222 2111000 01221000 000012
Q ss_pred HHHHHHHHHhccCCcEEEEEeCChHHHHHH
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITDVKDLHDWI 113 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~ 113 (169)
..+++.+. .|+|||.++++++...+...+
T Consensus 368 ~~~~~~l~-~l~p~givyvsc~p~tlarDl 396 (425)
T 2jjq_A 368 PRLVKRLN-REKPGVIVYVSCNPETFARDV 396 (425)
T ss_dssp HHHHHHHH-HHCCSEEEEEESCHHHHHHHH
T ss_pred HHHHHHHH-hcCCCcEEEEECChHHHHhHH
Confidence 45677664 599999999988666655543
No 235
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.80 E-value=1e-08 Score=81.77 Aligned_cols=84 Identities=10% Similarity=-0.020 Sum_probs=52.3
Q ss_pred CCeEEEEcCccc-cc--CcCCCCcEEEEeCCHHHHHHHHHHhc-cccc--eEEEeCC----CCccc------ccchhhhc
Q psy13086 18 KVEFVDVGCGKL-YL--PMFPSTLILGLEIRVKVSDYVIDEWS-LYLK--KMFFLYP----DPHFK------RCKYKWRI 81 (169)
Q Consensus 18 ~~~iLDiGCG~G-la--~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d--~v~~~f~----d~~f~------~~h~~~~~ 81 (169)
..+|||||||+| |+ .. +...++|+||++.|++.+++++. ...+ .....+. ...+| ..|+..+.
T Consensus 106 p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~LE~q 184 (253)
T 3frh_A 106 PRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLLERE 184 (253)
T ss_dssp CSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHHHHHH
T ss_pred CCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHHhhhh
Confidence 579999999999 33 23 88999999999999999998764 1111 1111111 11222 22333222
Q ss_pred ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
-....+ .+...|+++|.++-.
T Consensus 185 ~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 185 QAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp STTHHH-HHHHHCBCSEEEEEE
T ss_pred chhhHH-HHHHHhcCCCEEEEc
Confidence 223344 778899999887643
No 236
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.80 E-value=1.5e-08 Score=84.79 Aligned_cols=85 Identities=9% Similarity=0.027 Sum_probs=56.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEEe-------CC---CCcccccch----
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFL-------YP---DPHFKRCKY---- 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~-------f~---d~~f~~~h~---- 77 (169)
+.+||||| |+| ++...+..+|+|+|+|+.|++.|+++++ ..++.+.+. ++ +..||..-.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 57999999 999 5556676799999999999999998765 112222211 11 112332110
Q ss_pred -hhhcccHHHHHHHHHhccCCcE-EEEEeC
Q psy13086 78 -KWRIINQNLLSEYAYVLSEGGI-VYTITD 105 (169)
Q Consensus 78 -~~~~~~~~~l~~~~rvLkpGG~-l~i~~d 105 (169)
... ...+++++.++|||||+ +++.+.
T Consensus 252 ~~~~--~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 252 TLEA--IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp SHHH--HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred chHH--HHHHHHHHHHHcccCCeEEEEEEe
Confidence 001 25799999999999994 355543
No 237
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.79 E-value=1.2e-09 Score=87.79 Aligned_cols=83 Identities=7% Similarity=-0.126 Sum_probs=48.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHH----------hc-------------cccceEEEeCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDE----------WS-------------LYLKKMFFLYPD 69 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~----------~~-------------~~~d~v~~~f~d 69 (169)
+.+|||||||+| +++. .+|+|||+|+ |+..++++ +. .++|.|...+.
T Consensus 75 g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~~- 149 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDVG- 149 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-
T ss_pred CCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeCc-
Confidence 678999999999 4444 6999999998 64332211 10 22333333222
Q ss_pred CcccccchhhhcccHHHHHHHHHhccCCc--EEEEEeCC
Q psy13086 70 PHFKRCKYKWRIINQNLLSEYAYVLSEGG--IVYTITDV 106 (169)
Q Consensus 70 ~~f~~~h~~~~~~~~~~l~~~~rvLkpGG--~l~i~~d~ 106 (169)
.... .+.....-...+++++.++||||| .|++....
T Consensus 150 ~~~~-~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 150 ESSP-KWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCS-CHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred ccCC-ccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 0000 000000000137899999999999 99987643
No 238
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.78 E-value=4e-09 Score=78.41 Aligned_cols=77 Identities=14% Similarity=0.024 Sum_probs=52.2
Q ss_pred CCCCCeEEEEcCcccccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEE-----EeC---CCCcccc------cchh-h
Q psy13086 15 CEKKVEFVDVGCGKLYLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMF-----FLY---PDPHFKR------CKYK-W 79 (169)
Q Consensus 15 ~~~~~~iLDiGCG~Gla~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~-----~~f---~d~~f~~------~h~~-~ 79 (169)
|.++.+|||||||+ +++|+|+.|++.|+++....+..+. +.+ ++..||. .|+. .
T Consensus 10 ~~~g~~vL~~~~g~-----------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~ 78 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTL 78 (176)
T ss_dssp CCTTSEEEEEECTT-----------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCC
T ss_pred CCCCCEEEEecCCc-----------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhccc
Confidence 34578999999996 2399999999999987641111111 122 3444543 2222 1
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
....++++++|+|||||.|++..
T Consensus 79 --~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 79 --HSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp --CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHCCCCEEEEEEc
Confidence 13789999999999999999964
No 239
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.78 E-value=5.1e-09 Score=92.21 Aligned_cols=86 Identities=8% Similarity=0.089 Sum_probs=52.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc--c--ccceEE-----E--eCCCCcccc------
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS--L--YLKKMF-----F--LYPDPHFKR------ 74 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~--~--~~d~v~-----~--~f~d~~f~~------ 74 (169)
++.+|||||||+| ||+. +++|+|||+|+.+|+.|+.+.. + .++-.. + .+.+..||.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 3468999999999 5544 6899999999999999987643 1 111100 0 123334553
Q ss_pred cchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 75 CKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 75 ~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.+|....-.-..+..+.+.|+++|..++.+
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 233221111123455777888988877754
No 240
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.77 E-value=1.2e-08 Score=92.18 Aligned_cols=85 Identities=11% Similarity=0.100 Sum_probs=58.6
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc------------------------cccceEEEeC
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS------------------------LYLKKMFFLY 67 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~------------------------~~~d~v~~~f 67 (169)
++.+|||+||||| ++. ....+|++||+|+.|++.|++|+. .++|.|.+.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~-~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D- 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGL-GGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFID- 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEEC-
T ss_pred CCCcEEEeeechhHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEEC-
Confidence 3678999999999 232 223469999999999999998753 235554432
Q ss_pred CCCccccc-------chhhhcccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 68 PDPHFKRC-------KYKWRIINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 68 ~d~~f~~~-------h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
.|.|... +..+ ....+++++.++|||||.|++++..
T Consensus 617 -PP~f~~~~~~~~~~~~~~--~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 617 -PPTFSNSKRMEDAFDVQR--DHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp -CCSBC-------CCBHHH--HHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -CccccCCccchhHHHHHH--HHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2233211 1111 1357899999999999999998765
No 241
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.77 E-value=7e-09 Score=83.86 Aligned_cols=39 Identities=13% Similarity=0.143 Sum_probs=32.4
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
++.+|||||||+| ++.. ..+++|||+|+.|++.|++++.
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~ 71 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQ 71 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHH
Confidence 3678999999999 4444 3589999999999999988753
No 242
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.75 E-value=2.3e-08 Score=84.19 Aligned_cols=86 Identities=12% Similarity=0.033 Sum_probs=56.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c--------------------------ccceEEE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L--------------------------YLKKMFF 65 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~--------------------------~~d~v~~ 65 (169)
+.+|||+|||+| ++.. ...+|+|+|+|+.+++.|++++. . .+|.|.+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 678999999999 4433 24589999999999999987643 1 2333333
Q ss_pred eCCCCccccc-chhhh--cccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 66 LYPDPHFKRC-KYKWR--IINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 66 ~f~d~~f~~~-h~~~~--~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
.- |.+... ..... -....++.++.++|+|||.+++++..
T Consensus 300 dp--P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 300 DP--PKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp CC--SSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CC--CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 21 111100 00000 01257899999999999999998754
No 243
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.74 E-value=4.5e-09 Score=86.99 Aligned_cols=84 Identities=18% Similarity=0.079 Sum_probs=55.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeC--CCCcccc------cchhhhcccH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLY--PDPHFKR------CKYKWRIINQ 84 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f--~d~~f~~------~h~~~~~~~~ 84 (169)
..+|||||||+| +++.+|+.+++++|+ +.|++.|++. + .+..+...+ +-|.+|. .|+...-...
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~-~v~~~~~d~~~~~~~~D~v~~~~vlh~~~d~~~~ 270 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-E-NLNFVGGDMFKSIPSADAVLLKWVLHDWNDEQSL 270 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-S-SEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-C-CcEEEeCccCCCCCCceEEEEcccccCCCHHHHH
Confidence 578999999999 777889999999999 7888877641 1 111111111 1112332 1221111123
Q ss_pred HHHHHHHHhccC---CcEEEEEe
Q psy13086 85 NLLSEYAYVLSE---GGIVYTIT 104 (169)
Q Consensus 85 ~~l~~~~rvLkp---GG~l~i~~ 104 (169)
.++++++++||| ||++++.+
T Consensus 271 ~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 271 KILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp HHHHHHHHHTGGGGGGCEEEEEE
T ss_pred HHHHHHHHhCCCCCCCcEEEEEE
Confidence 899999999999 99999874
No 244
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.72 E-value=4e-08 Score=82.42 Aligned_cols=84 Identities=14% Similarity=0.053 Sum_probs=58.8
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------------------cc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------------------LY 59 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------------------~~ 59 (169)
..+||+||||+| +++. +..++++||+++.+++.|+++++ ..
T Consensus 189 pkrVL~IGgG~G~~arellk~-~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 189 GKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCEEEEEECChhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 579999999999 3333 34799999999999999987642 23
Q ss_pred cceEEEeCCC-CcccccchhhhcccHHHHHHH----HHhccCCcEEEEEeC
Q psy13086 60 LKKMFFLYPD-PHFKRCKYKWRIINQNLLSEY----AYVLSEGGIVYTITD 105 (169)
Q Consensus 60 ~d~v~~~f~d-~~f~~~h~~~~~~~~~~l~~~----~rvLkpGG~l~i~~d 105 (169)
+|.|.+..++ |.-... ..+...++++.+ .++|+|||.+++.+.
T Consensus 268 fDvII~D~~d~P~~~~p---~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSP---EEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp EEEEEEECCSSCCCCC-------CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCc---hhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 6666666555 421011 012335677777 999999999998764
No 245
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.72 E-value=6.2e-09 Score=85.95 Aligned_cols=87 Identities=9% Similarity=0.108 Sum_probs=56.4
Q ss_pred CCeEEEEcCccc-----ccCcCCC-----CcEEEEeCCHHHHHHHHHHhc-------------------cccceEEEeCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPS-----TLILGLEIRVKVSDYVIDEWS-------------------LYLKKMFFLYP 68 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~-----~~v~GiDis~~~l~~a~~~~~-------------------~~~d~v~~~f~ 68 (169)
..+|||+|||+| ++...+. .+++|+|+++.+++.|+.++. ..+|.|...-|
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NPP 210 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLP 210 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEECC
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECCC
Confidence 578999999999 3333332 689999999999999987643 23444443322
Q ss_pred CCcccccchhhhc----------ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 69 DPHFKRCKYKWRI----------INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 69 d~~f~~~h~~~~~----------~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
-.+........+. ....+++.+.+.|||||++.+++
T Consensus 211 fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 211 VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 1111100000000 01358999999999999999987
No 246
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.71 E-value=9.7e-09 Score=84.08 Aligned_cols=82 Identities=10% Similarity=-0.042 Sum_probs=47.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeC----CHHHHHHHH-H-----Hhc------------cccceEEEeCCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEI----RVKVSDYVI-D-----EWS------------LYLKKMFFLYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDi----s~~~l~~a~-~-----~~~------------~~~d~v~~~f~d~ 70 (169)
+.+|||||||+| ++++ ..|+|||+ ++.+++.+. + ++. .++|.|....+..
T Consensus 83 g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~~~~ 159 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDIGES 159 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECCccc
Confidence 579999999999 5555 58999999 554433211 1 111 2234333322110
Q ss_pred cccccchhh-hcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 71 HFKRCKYKW-RIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 71 ~f~~~h~~~-~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
..++.. ......+|+++.++|||||.|++...
T Consensus 160 ---~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 160 ---SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp ---CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred ---cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 001100 00001478999999999999998754
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.69 E-value=1.1e-07 Score=81.00 Aligned_cols=103 Identities=14% Similarity=0.104 Sum_probs=61.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-cccceEEEe---C---------CCCcccccchh-
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-LYLKKMFFL---Y---------PDPHFKRCKYK- 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~~~d~v~~~---f---------~d~~f~~~h~~- 78 (169)
+.+|||+|||+| ++.. ..+|+|+|+|+.|++.|++++. ..++.+.+. . ++..||..-..
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP 364 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDP 364 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECC
T ss_pred CCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECC
Confidence 578999999999 5554 5799999999999999998764 222222211 1 11112211000
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcCCCcee
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEHPLFVE 125 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~~~f~~ 125 (169)
.+.-..++++.+. .++|++.++++++...+.... ..+.+. +|..
T Consensus 365 Pr~g~~~~~~~l~-~~~p~~ivyvsc~p~tlard~-~~l~~~-Gy~~ 408 (433)
T 1uwv_A 365 ARAGAAGVMQQII-KLEPIRIVYVSCNPATLARDS-EALLKA-GYTI 408 (433)
T ss_dssp CTTCCHHHHHHHH-HHCCSEEEEEESCHHHHHHHH-HHHHHT-TCEE
T ss_pred CCccHHHHHHHHH-hcCCCeEEEEECChHHHHhhH-HHHHHC-CcEE
Confidence 0001235666654 479999999987766666544 334433 3444
No 248
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.67 E-value=4.9e-09 Score=88.04 Aligned_cols=100 Identities=11% Similarity=0.089 Sum_probs=63.6
Q ss_pred CCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc------------cccceEEEeCCCCcccccc---
Q psy13086 18 KVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS------------LYLKKMFFLYPDPHFKRCK--- 76 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~------------~~~d~v~~~f~d~~f~~~h--- 76 (169)
..+|||+|||+| +++++ +..+++|+|+++.|++.| .++. ..+|.|..+- |+.....
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-~~~~~~~~D~~~~~~~~~fD~Ii~NP--Py~~~~~~~~ 116 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-PWAEGILADFLLWEPGEAFDLILGNP--PYGIVGEASK 116 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-TTEEEEESCGGGCCCSSCEEEEEECC--CCCCBSCTTT
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-CCCcEEeCChhhcCccCCCCEEEECc--CccCcccccc
Confidence 569999999999 44444 568999999999999877 2222 3566665431 2211100
Q ss_pred -------hhhhc-------------ccHHHHHHHHHhccCCcEEEEEeCCh----HHHHHHHHHHhcC
Q psy13086 77 -------YKWRI-------------INQNLLSEYAYVLSEGGIVYTITDVK----DLHDWIVSHFTEH 120 (169)
Q Consensus 77 -------~~~~~-------------~~~~~l~~~~rvLkpGG~l~i~~d~~----~~~~~~~~~~~~~ 120 (169)
..+.. ....+++.+.++|+|||.+.++++.. .....+++.+.++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~~~ 184 (421)
T 2ih2_A 117 YPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLARE 184 (421)
T ss_dssp CSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHHhc
Confidence 00000 12378999999999999999987543 2334455555443
No 249
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.61 E-value=4.7e-08 Score=82.30 Aligned_cols=87 Identities=10% Similarity=-0.065 Sum_probs=58.7
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc-c---------------ccceEEEeCCC-------
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS-L---------------YLKKMFFLYPD------- 69 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~-~---------------~~d~v~~~f~d------- 69 (169)
+.+|||+|||+| ++.+.+...|+++|+++.+++.|++|+. . .++.+.+...|
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 568999999999 5666677789999999999999998765 2 33333322111
Q ss_pred --CcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 70 --PHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 70 --~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..||......--....+++.+.+.|||||.++++.
T Consensus 128 ~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 01221110000012579999999999999998875
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.61 E-value=8.8e-08 Score=77.92 Aligned_cols=38 Identities=18% Similarity=0.446 Sum_probs=32.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHh
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~ 56 (169)
++.+|||||||+| ++.. ..+|+|+|+|+.|++.|++++
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~ 84 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRC 84 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHH
T ss_pred CcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHH
Confidence 3678999999999 4444 469999999999999998875
No 251
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.53 E-value=1.2e-08 Score=83.12 Aligned_cols=101 Identities=12% Similarity=0.032 Sum_probs=58.0
Q ss_pred CCCeEEEEcCcc------c---ccCcCC-CCcEEEEeCCHHHHHHHHHHh-c----------cccceEEEeCCCCcccc-
Q psy13086 17 KKVEFVDVGCGK------L---YLPMFP-STLILGLEIRVKVSDYVIDEW-S----------LYLKKMFFLYPDPHFKR- 74 (169)
Q Consensus 17 ~~~~iLDiGCG~------G---la~~~p-~~~v~GiDis~~~l~~a~~~~-~----------~~~d~v~~~f~d~~f~~- 74 (169)
++.+|||||||+ | +++..+ +..|+|+|+|+. +..+ .+ - .++|.|......++...
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v~~v--~~~i~gD~~~~~~~~~fD~Vvsn~~~~~~g~~ 139 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-VSDA--DSTLIGDCATVHTANKWDLIISDMYDPRTKHV 139 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-BCSS--SEEEESCGGGCCCSSCEEEEEECCCCCC---C
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-CCCC--EEEEECccccCCccCcccEEEEcCCccccccc
Confidence 367999999955 5 445555 689999999987 3111 11 1 35676665432222100
Q ss_pred --cchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcC
Q psy13086 75 --CKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEH 120 (169)
Q Consensus 75 --~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~ 120 (169)
.+.........+++++.++|||||.|++..............+..+
T Consensus 140 ~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~ 187 (290)
T 2xyq_A 140 TKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHF 187 (290)
T ss_dssp CSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTE
T ss_pred cccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHc
Confidence 0000000125799999999999999999653222122344444443
No 252
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.51 E-value=5.6e-07 Score=73.76 Aligned_cols=41 Identities=7% Similarity=0.074 Sum_probs=34.2
Q ss_pred CCCeEEEEcCccc-----ccCcC-CCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMF-PSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~-p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
++.+|||+|||+| +|... +...|+|+|+++.+++.+++++.
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~ 148 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLA 148 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 4679999999999 55543 55799999999999999988754
No 253
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.51 E-value=2.5e-07 Score=77.26 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=32.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
+.+|||+|||+| +|.. ..+|+|+|+|+.|++.|++|+.
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~ 256 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIA 256 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHH
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHH
Confidence 467999999999 5543 3589999999999999998765
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.40 E-value=7.2e-07 Score=75.13 Aligned_cols=71 Identities=17% Similarity=0.189 Sum_probs=44.4
Q ss_pred CcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCCcccccchhhhcccHHHHHHHHHhcc
Q psy13086 37 TLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLS 95 (169)
Q Consensus 37 ~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLk 95 (169)
..|+|+|+++.|++.|++|+. .++|.|. .||-+..+... .-....+.+++.++||
T Consensus 258 ~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv---~NPPyg~rl~~-~~~l~~ly~~lg~~lk 333 (385)
T 3ldu_A 258 FKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFII---TNPPYGERLED-KDSVKQLYKELGYAFR 333 (385)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEE---ECCCCCCSHHH-HHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEE---ECCCCcCccCC-HHHHHHHHHHHHHHHh
Confidence 579999999999999998764 1122222 22222211100 0012457777777887
Q ss_pred C--CcEEEEEeCChHHHH
Q psy13086 96 E--GGIVYTITDVKDLHD 111 (169)
Q Consensus 96 p--GG~l~i~~d~~~~~~ 111 (169)
+ ||.+++.|..+.+..
T Consensus 334 ~~~g~~~~iit~~~~l~~ 351 (385)
T 3ldu_A 334 KLKNWSYYLITSYEDFEY 351 (385)
T ss_dssp TSBSCEEEEEESCTTHHH
T ss_pred hCCCCEEEEEECCHHHHH
Confidence 7 999999887776655
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.39 E-value=7.5e-07 Score=75.29 Aligned_cols=71 Identities=14% Similarity=0.118 Sum_probs=43.5
Q ss_pred CcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCCcccccchhhhcccHHHHHHHHHhcc
Q psy13086 37 TLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLS 95 (169)
Q Consensus 37 ~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLk 95 (169)
..|+|+|+|+.|++.|++|+. .++|.|. .+|-+..+.... -....+.+++.++||
T Consensus 264 ~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv---~NPPYg~rl~~~-~~l~~ly~~lg~~lk 339 (393)
T 3k0b_A 264 LNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVV---ANPPYGERLEDE-EAVRQLYREMGIVYK 339 (393)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEE---ECCCCCCSHHHH-HHHHHHHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEE---ECCCCccccCCc-hhHHHHHHHHHHHHh
Confidence 569999999999999998764 1122222 222222111000 012346666667777
Q ss_pred C--CcEEEEEeCChHHHH
Q psy13086 96 E--GGIVYTITDVKDLHD 111 (169)
Q Consensus 96 p--GG~l~i~~d~~~~~~ 111 (169)
+ ||.+++.|..+.+..
T Consensus 340 ~~~g~~~~iit~~~~l~~ 357 (393)
T 3k0b_A 340 RMPTWSVYVLTSYELFEE 357 (393)
T ss_dssp TCTTCEEEEEECCTTHHH
T ss_pred cCCCCEEEEEECCHHHHH
Confidence 6 999999988777655
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.37 E-value=1.3e-06 Score=73.68 Aligned_cols=71 Identities=10% Similarity=0.078 Sum_probs=44.4
Q ss_pred CcEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeCCCCcccccchhhhcccHHHHHHHHHhcc
Q psy13086 37 TLILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLS 95 (169)
Q Consensus 37 ~~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLk 95 (169)
..++|+|+|+.|++.|++|+. .++|.|. .||-+..+.... -....+.+++.++||
T Consensus 257 ~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv---~NPPYG~rl~~~-~~l~~ly~~lg~~lk 332 (384)
T 3ldg_A 257 LDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLI---SNPPYGERLLDD-KAVDILYNEMGETFA 332 (384)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEE---ECCCCTTTTSCH-HHHHHHHHHHHHHHT
T ss_pred ceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEE---ECCchhhccCCH-HHHHHHHHHHHHHHh
Confidence 569999999999999998865 1122222 222222111000 012456777777777
Q ss_pred C--CcEEEEEeCChHHHH
Q psy13086 96 E--GGIVYTITDVKDLHD 111 (169)
Q Consensus 96 p--GG~l~i~~d~~~~~~ 111 (169)
+ ||.+++.|..+++..
T Consensus 333 ~~~g~~~~iit~~~~l~~ 350 (384)
T 3ldg_A 333 PLKTWSQFILTNDTDFEQ 350 (384)
T ss_dssp TCTTSEEEEEESCTTHHH
T ss_pred hCCCcEEEEEECCHHHHH
Confidence 7 999999988776654
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.35 E-value=2.4e-07 Score=79.13 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=55.9
Q ss_pred CCeEEEEcCccc-----ccCcC-------------CCCcEEEEeCCHHHHHHHHHHhc----------------------
Q psy13086 18 KVEFVDVGCGKL-----YLPMF-------------PSTLILGLEIRVKVSDYVIDEWS---------------------- 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~-------------p~~~v~GiDis~~~l~~a~~~~~---------------------- 57 (169)
+.+|||.|||+| ++... +..+++|+|+++.+++.|+.++.
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~ 251 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS 251 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc
Confidence 568999999999 22211 34689999999999999987642
Q ss_pred cccceEEEeCCCCcccccchh-----h-hc------ccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 58 LYLKKMFFLYPDPHFKRCKYK-----W-RI------INQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 58 ~~~d~v~~~f~d~~f~~~h~~-----~-~~------~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
..+|.|..+ |-|...... + .+ ....+++.+.++|||||++.++++.
T Consensus 252 ~~fD~Iv~N---PPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 252 TLVDVILAN---PPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp SCEEEEEEC---CCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCcCEEEEC---CCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 134444332 222111000 0 00 0137899999999999999988743
No 258
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.34 E-value=1.5e-06 Score=70.91 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=64.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc---------------------------cccceEEE
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS---------------------------LYLKKMFF 65 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~---------------------------~~~d~v~~ 65 (169)
..+||=||-|.| +.+..+..+++.|||++.+++.|++-++ ..+|.|.+
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~ 163 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEE
Confidence 578999999999 4444456799999999999999986431 56788877
Q ss_pred eCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 66 LYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 66 ~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..+||.-.. ..+...++++.++++|+|||.++..+
T Consensus 164 D~~dp~~~~----~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 164 DCTDPIGPG----ESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp SCCCCCCTT----CCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred eCCCcCCCc----hhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 777764221 23456789999999999999999875
No 259
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.32 E-value=3.3e-07 Score=74.94 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=35.6
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
+.+|||+|||+| ++...|+.+|+|+|+|+.|++.|++++.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~ 71 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLK 71 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTG
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 679999999999 6677778899999999999999998754
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.31 E-value=6.5e-07 Score=71.50 Aligned_cols=39 Identities=18% Similarity=0.310 Sum_probs=33.2
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
++.+|||||||+| ++.. ..+|+|||+++.|++.+++++.
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~~ 72 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKYN 72 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHHT
T ss_pred CcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHh
Confidence 3678999999999 4444 3699999999999999998875
No 261
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.30 E-value=9.3e-07 Score=70.71 Aligned_cols=25 Identities=32% Similarity=0.438 Sum_probs=20.7
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
++..++++++++++|||||+|..-+
T Consensus 189 ~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 189 DMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp GGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred hhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 4456899999999999999997533
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.27 E-value=5.6e-07 Score=70.99 Aligned_cols=39 Identities=15% Similarity=0.288 Sum_probs=33.0
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
++.+|||||||+| ++... .+++|+|+|+.|++.|++++.
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~ 73 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLV 73 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTT
T ss_pred CCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhc
Confidence 3678999999999 44443 689999999999999998764
No 263
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.26 E-value=4.5e-07 Score=73.33 Aligned_cols=39 Identities=10% Similarity=0.210 Sum_probs=31.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCC--CcEEEEeCCHHHHHHHHHH
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPS--TLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~--~~v~GiDis~~~l~~a~~~ 55 (169)
++.+|||||||+| ++...+. .+|+|||+|+.|++.|+++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh
Confidence 3678999999999 4444322 4599999999999999887
No 264
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.23 E-value=1.2e-06 Score=74.05 Aligned_cols=88 Identities=11% Similarity=0.064 Sum_probs=57.5
Q ss_pred CCeEEEEcCccc-----ccCcCCC-CcEEEEeCCHHHHHHHHHHhc-cccce--EEEeCCCC----------cccccchh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPS-TLILGLEIRVKVSDYVIDEWS-LYLKK--MFFLYPDP----------HFKRCKYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~-~~v~GiDis~~~l~~a~~~~~-~~~d~--v~~~f~d~----------~f~~~h~~ 78 (169)
+.+|||++||+| ++.+.++ ..|+++|+++.+++.+++|+. +.++. +.+...|. .||..-..
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 578999999999 4554444 589999999999999998876 33322 32222211 12210000
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
.--....+++.+.+.|+|||.++++..
T Consensus 133 P~g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 133 PFGTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp CSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCcCHHHHHHHHHHHhCCCCEEEEEec
Confidence 000024799999999999999988763
No 265
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.21 E-value=1.3e-06 Score=71.23 Aligned_cols=39 Identities=18% Similarity=0.184 Sum_probs=33.0
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
++.+|||||||+| ++.. ..+|+|||+++.|++.|++++.
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~ 93 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKE 93 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHH
T ss_pred CcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhc
Confidence 3679999999999 4444 4699999999999999998763
No 266
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.21 E-value=6.7e-07 Score=71.06 Aligned_cols=38 Identities=18% Similarity=0.241 Sum_probs=32.3
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHH
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~ 55 (169)
++.+|||||||+| ++.. +..+++|||+|+.|++.++++
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS
T ss_pred CcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc
Confidence 3678999999999 4444 457999999999999999876
No 267
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.17 E-value=1.1e-06 Score=70.88 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=32.3
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
++ +|||||||+| ++.. ..+|+|||+++.|++.+++++.
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~~~ 89 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEETLS 89 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTT
T ss_pred CC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcC
Confidence 35 8999999999 4444 3699999999999999998865
No 268
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.08 E-value=2.6e-06 Score=68.83 Aligned_cols=87 Identities=9% Similarity=0.056 Sum_probs=49.4
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHH------Hhc-------------cccceEEEeCCCCccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVID------EWS-------------LYLKKMFFLYPDPHFK 73 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~------~~~-------------~~~d~v~~~f~d~~f~ 73 (169)
..+|||||||+| .+...+...+.|+|++.++...... ++- ..+|.|....... .
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apn--s 152 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGES--S 152 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC--C
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccC--c
Confidence 568999999999 3444455578888888543111110 100 3455544322111 1
Q ss_pred ccchhhhcccHHHHHHHHHhccCC-cEEEEEeCC
Q psy13086 74 RCKYKWRIINQNLLSEYAYVLSEG-GIVYTITDV 106 (169)
Q Consensus 74 ~~h~~~~~~~~~~l~~~~rvLkpG-G~l~i~~d~ 106 (169)
..++....-.-.+++.+.++|||| |.|++..-.
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 111111111124589999999999 999998654
No 269
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.03 E-value=1.9e-06 Score=68.59 Aligned_cols=40 Identities=13% Similarity=0.104 Sum_probs=31.1
Q ss_pred CCeEEEEcCccc-ccCcCCCCc--EEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL-YLPMFPSTL--ILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-la~~~p~~~--v~GiDis~~~l~~a~~~~~ 57 (169)
+.+|||||||+| ++..-...+ |+|+|+++.|++.+++++.
T Consensus 22 ~~~VLEIG~G~G~lt~l~~~~~~~v~avEid~~~~~~a~~~~~ 64 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPF 64 (252)
T ss_dssp TCCEEEECCTTTTTHHHHHTTCSCEEEECCCHHHHHHHHTCTT
T ss_pred cCEEEEECCCCcHHHHhhhCCCCeEEEEECCHHHHHHHHHHhc
Confidence 578999999999 332111245 9999999999999988653
No 270
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.00 E-value=1.7e-05 Score=66.82 Aligned_cols=88 Identities=14% Similarity=0.021 Sum_probs=61.5
Q ss_pred CCeEEEEcCccc-cc---CcCCCCcEEEEeCCHHHHHHHHHHhc---------------------------------ccc
Q psy13086 18 KVEFVDVGCGKL-YL---PMFPSTLILGLEIRVKVSDYVIDEWS---------------------------------LYL 60 (169)
Q Consensus 18 ~~~iLDiGCG~G-la---~~~p~~~v~GiDis~~~l~~a~~~~~---------------------------------~~~ 60 (169)
+.+||=||-|.| .+ .++|..+++.|||++.+++.|++-++ ..+
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~y 285 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREF 285 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCE
T ss_pred CCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCce
Confidence 478999999999 11 23456799999999999999986321 247
Q ss_pred ceEEEeCCCCccc--ccchhhhcccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 61 KKMFFLYPDPHFK--RCKYKWRIINQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 61 d~v~~~f~d~~f~--~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
|.|.+..+|+... .......+...++++.++++|+|||.++.+..
T Consensus 286 DvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 286 DYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp EEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred eEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 7777765543211 11111233457899999999999999988754
No 271
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.94 E-value=3.8e-06 Score=67.06 Aligned_cols=36 Identities=8% Similarity=-0.014 Sum_probs=30.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCH-------HHHHHHHHH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRV-------KVSDYVIDE 55 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~-------~~l~~a~~~ 55 (169)
+.+|||+|||+| +|.. ..+|+|+|+|+ .|++.|+++
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n 131 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLN 131 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHS
T ss_pred cCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhH
Confidence 578999999999 4543 57999999999 999988754
No 272
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.92 E-value=0.00027 Score=59.03 Aligned_cols=139 Identities=12% Similarity=0.071 Sum_probs=80.7
Q ss_pred CCeEEEEcCccc------ccC---------------cCCCCcEEEEeCCHHHHHHHHHHhc-------------------
Q psy13086 18 KVEFVDVGCGKL------YLP---------------MFPSTLILGLEIRVKVSDYVIDEWS------------------- 57 (169)
Q Consensus 18 ~~~iLDiGCG~G------la~---------------~~p~~~v~GiDis~~~l~~a~~~~~------------------- 57 (169)
.-+|+|+||++| +.. ..|+.+|+.-|+..++...+-+.++
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 468999999999 111 3567899999999987776644332
Q ss_pred ------cccceEEEeCCCCcccccc---------------------------hhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 58 ------LYLKKMFFLYPDPHFKRCK---------------------------YKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 58 ------~~~d~v~~~f~d~~f~~~h---------------------------~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+++|.++..+.-.|..... ..++ ...||+..++.|+|||++++..
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D--~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQED--HALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHH--HHHHHHHHHHHBCTTCEEEEEE
T ss_pred hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHhcCCceEEEEE
Confidence 5566665544433332100 0000 1457999999999999999974
Q ss_pred C---Ch--------HHHHHHH---HHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHHcCC-CeEEEE
Q psy13086 105 D---VK--------DLHDWIV---SHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTRNKG-EKFCAV 162 (169)
Q Consensus 105 d---~~--------~~~~~~~---~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~g~-~i~~~~ 162 (169)
. .. ...+.+. ..+...+.-+....+. .+.|+ -.++..+|+....++|. .|.++.
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~--f~~P~--y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDK--FNIPQ--YTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGG--GCCCC--BCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhc--cCCCc--cCCCHHHHHHHHHHcCCceEEEEE
Confidence 1 11 1112122 2223333222211111 13443 45667788888888876 775543
No 273
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.92 E-value=4.1e-05 Score=70.06 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=63.9
Q ss_pred CCeEEEEcCccc-----ccCcCC---CCcEEEEeCCHHHHHHH--HHHhc--------------------------cccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP---STLILGLEIRVKVSDYV--IDEWS--------------------------LYLK 61 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p---~~~v~GiDis~~~l~~a--~~~~~--------------------------~~~d 61 (169)
+.+|||.|||+| ++...+ ..+++|+|+++.+++.| +.++. ..+|
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 679999999999 333443 35899999999999998 43321 1233
Q ss_pred eEEEeCCCCcccc--------cchhhh----------------cccHHHHHHHHHhccCCcEEEEEeCChHH------HH
Q psy13086 62 KMFFLYPDPHFKR--------CKYKWR----------------IINQNLLSEYAYVLSEGGIVYTITDVKDL------HD 111 (169)
Q Consensus 62 ~v~~~f~d~~f~~--------~h~~~~----------------~~~~~~l~~~~rvLkpGG~l~i~~d~~~~------~~ 111 (169)
.|.. +|-|.. .....+ -....+++.+.+.|+|||++.++++..-+ ..
T Consensus 402 VVIg---NPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~k 478 (878)
T 3s1s_A 402 VVVM---NPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESK 478 (878)
T ss_dssp EEEE---CCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHH
T ss_pred EEEE---CCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHH
Confidence 3332 222210 000000 01346899999999999999998765433 45
Q ss_pred HHHHHHhcCCC
Q psy13086 112 WIVSHFTEHPL 122 (169)
Q Consensus 112 ~~~~~~~~~~~ 122 (169)
.+++.+.++..
T Consensus 479 kLRk~LLe~~~ 489 (878)
T 3s1s_A 479 AFREFLVGNFG 489 (878)
T ss_dssp HHHHHHTTTTC
T ss_pred HHHHHHHhCCC
Confidence 56676665543
No 274
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.91 E-value=3.7e-07 Score=71.77 Aligned_cols=38 Identities=11% Similarity=0.206 Sum_probs=31.5
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHh
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~ 56 (169)
++.+|||||||+| ++... .+++|+|+|+.|++.|++++
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~ 71 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKL 71 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTT
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHh
Confidence 3678999999999 44443 79999999999999887765
No 275
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.89 E-value=1.1e-05 Score=68.68 Aligned_cols=38 Identities=11% Similarity=0.006 Sum_probs=32.1
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
+.+|||+|||+| ++.. ..+|+|||+|+.|++.|++|+.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~ 136 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIP 136 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHH
Confidence 578999999999 4444 4699999999999999987653
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.87 E-value=4.1e-05 Score=69.07 Aligned_cols=22 Identities=14% Similarity=0.096 Sum_probs=19.5
Q ss_pred CCcEEEEeCCHHHHHHHHHHhc
Q psy13086 36 STLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 36 ~~~v~GiDis~~~l~~a~~~~~ 57 (169)
+..++|+|+++.|++.|++|+.
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~ 277 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNAR 277 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHH
T ss_pred CccEEEEECCHHHHHHHHHHHH
Confidence 3589999999999999998865
No 277
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.85 E-value=2.2e-05 Score=68.78 Aligned_cols=86 Identities=12% Similarity=0.045 Sum_probs=54.3
Q ss_pred CCeEEEEcCccc-----ccC----cCC--------------CCcEEEEeCCHHHHHHHHHHhc-----------------
Q psy13086 18 KVEFVDVGCGKL-----YLP----MFP--------------STLILGLEIRVKVSDYVIDEWS----------------- 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~----~~p--------------~~~v~GiDis~~~l~~a~~~~~----------------- 57 (169)
+.+|||.+||+| ++. ..+ ..+++|+|+++.+++.|+.++.
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 568999999999 111 111 2489999999999999986532
Q ss_pred ----------cccceEEEeCCCCcccccchh---hh------cccHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 58 ----------LYLKKMFFLYPDPHFKRCKYK---WR------IINQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 58 ----------~~~d~v~~~f~d~~f~~~h~~---~~------~~~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
..+|.|.. +|-|...... .. -....+++.+.+.|||||++.++++.
T Consensus 250 DtL~~~~~~~~~fD~Vv~---NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~ 314 (541)
T 2ar0_A 250 NTLGSDGENLPKAHIVAT---NPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPD 314 (541)
T ss_dssp CTTSHHHHTSCCEEEEEE---CCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred CCcccccccccCCeEEEE---CCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 12333322 2222111100 00 00136999999999999999998753
No 278
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.85 E-value=0.00015 Score=61.12 Aligned_cols=73 Identities=14% Similarity=0.023 Sum_probs=38.8
Q ss_pred HHHHHHHhccCCcEEEEEeC---Ch--H-----HHHHHHHHHhcCCCceecCccccccCCCCCCCCCCCCHHHHHHHHcC
Q psy13086 86 LLSEYAYVLSEGGIVYTITD---VK--D-----LHDWIVSHFTEHPLFVECDLEELKRTDPVVDKLYQSTEEGQKVTRNK 155 (169)
Q Consensus 86 ~l~~~~rvLkpGG~l~i~~d---~~--~-----~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~T~ye~~~~~~g 155 (169)
||+..++.|+|||++++.+. .. + ........+...+........ ..+.|+ -.++..+|+....++|
T Consensus 207 FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~d--sf~~P~--y~ps~~E~~~~le~~g 282 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLD--SFNVPI--YAPSTEEVKRIVEEEG 282 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHH--TCCCSB--CCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhc--ccCCcc--cCCCHHHHHHHHHHcC
Confidence 47777999999999999852 22 1 333233333333322211111 113343 3455566677677765
Q ss_pred -CCeEEEE
Q psy13086 156 -GEKFCAV 162 (169)
Q Consensus 156 -~~i~~~~ 162 (169)
..|.++.
T Consensus 283 ~F~i~~le 290 (384)
T 2efj_A 283 SFEILYLE 290 (384)
T ss_dssp SEEEEEEE
T ss_pred CceEEEEE
Confidence 4665543
No 279
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.84 E-value=4.6e-05 Score=64.05 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=18.1
Q ss_pred HHHHHHHHHhccCCcEEEEEe
Q psy13086 84 QNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..+|+..++.|+|||+++++.
T Consensus 205 ~~fL~~ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 205 AEFLRARAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEEE
Confidence 347888899999999999975
No 280
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.75 E-value=1.3e-05 Score=64.89 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=34.0
Q ss_pred CCCeEEEEcCccc---ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 17 KKVEFVDVGCGKL---YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 17 ~~~~iLDiGCG~G---la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
++.+|||++||+| ++...-+.+++|+|+++.+++.|++|+.
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 4679999999999 3333345799999999999999999876
No 281
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.75 E-value=9.6e-05 Score=61.76 Aligned_cols=88 Identities=11% Similarity=-0.009 Sum_probs=57.9
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc----------------------------cccceE
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS----------------------------LYLKKM 63 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~----------------------------~~~d~v 63 (169)
++.+|||+.+|.| ++...+...++++|+|+.-++.+++++. ..+|.|
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~V 227 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRV 227 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEE
Confidence 4679999999999 6666666689999999987776665432 346666
Q ss_pred EEeCC--CC-------cccccc-h----hhhc--ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 64 FFLYP--DP-------HFKRCK-Y----KWRI--INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 64 ~~~f~--d~-------~f~~~h-~----~~~~--~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.+.-| .. ..+... + ...+ .+.++|+...+.|||||+|+-+|
T Consensus 228 LlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 228 LVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 54322 10 000000 0 0001 24578999999999999998775
No 282
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.73 E-value=1.3e-05 Score=64.91 Aligned_cols=86 Identities=13% Similarity=0.018 Sum_probs=50.3
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHH------Hh------------c-cccceEEEeCCCCccc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVID------EW------------S-LYLKKMFFLYPDPHFK 73 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~------~~------------~-~~~d~v~~~f~d~~f~ 73 (169)
..+|||||||+| .+.+.+...++|+|++.++...+.. ++ . ..+|.|... -.++
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSD---mApn 167 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCD---IGES 167 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEEC---CCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEec---CccC
Confidence 568999999999 3445566689999998654222211 10 0 334444321 1111
Q ss_pred -ccchhhhcccHHHHHHHHHhccCC--cEEEEEeCC
Q psy13086 74 -RCKYKWRIINQNLLSEYAYVLSEG--GIVYTITDV 106 (169)
Q Consensus 74 -~~h~~~~~~~~~~l~~~~rvLkpG--G~l~i~~d~ 106 (169)
..+.....-.-.+|+-+.++|+|| |.|++..-.
T Consensus 168 sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 168 SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 111111111124688888999999 999998654
No 283
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.68 E-value=0.00016 Score=55.81 Aligned_cols=49 Identities=8% Similarity=0.062 Sum_probs=38.0
Q ss_pred CCeEEEEcCccc---ccCcCCCCcEEEEeCCHHHHHHHHHHhc--cc--cceEEEeC
Q psy13086 18 KVEFVDVGCGKL---YLPMFPSTLILGLEIRVKVSDYVIDEWS--LY--LKKMFFLY 67 (169)
Q Consensus 18 ~~~iLDiGCG~G---la~~~p~~~v~GiDis~~~l~~a~~~~~--~~--~d~v~~~f 67 (169)
..+|||||||.- +|+. ++.+|+.||.+++..+.|++++. +. .+.|.+..
T Consensus 31 a~~VLEiGtGySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~ 86 (202)
T 3cvo_A 31 AEVILEYGSGGSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVW 86 (202)
T ss_dssp CSEEEEESCSHHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEE
T ss_pred CCEEEEECchHHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEE
Confidence 568999999755 6664 47899999999999999998876 22 45565543
No 284
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.62 E-value=0.00036 Score=61.20 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=63.2
Q ss_pred CCeEEEEcCccc--c---cCc---CCCCcEEEEeCCHHHHHHHHHHhc--------------------------cccceE
Q psy13086 18 KVEFVDVGCGKL--Y---LPM---FPSTLILGLEIRVKVSDYVIDEWS--------------------------LYLKKM 63 (169)
Q Consensus 18 ~~~iLDiGCG~G--l---a~~---~p~~~v~GiDis~~~l~~a~~~~~--------------------------~~~d~v 63 (169)
..+|||.+||+| + +.. .+..+++|+|+++.++..|+.++. ..+|.|
T Consensus 222 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~I 301 (542)
T 3lkd_A 222 GFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGV 301 (542)
T ss_dssp TCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEE
T ss_pred CCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEE
Confidence 579999999999 1 122 235789999999999999986532 123433
Q ss_pred EEe--CCCCcccccc--hhhh------c-----ccHHHHHHHHHhcc-CCcEEEEEeCChHH-----HHHHHHHHhcCC
Q psy13086 64 FFL--YPDPHFKRCK--YKWR------I-----INQNLLSEYAYVLS-EGGIVYTITDVKDL-----HDWIVSHFTEHP 121 (169)
Q Consensus 64 ~~~--f~d~~f~~~h--~~~~------~-----~~~~~l~~~~rvLk-pGG~l~i~~d~~~~-----~~~~~~~~~~~~ 121 (169)
..+ |...|-.... ...+ + ..-.+++.+.+.|| |||++.++++..-+ ...+++.+.++.
T Consensus 302 vaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~Lle~~ 380 (542)
T 3lkd_A 302 LMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKALLEEG 380 (542)
T ss_dssp EECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHHHHTT
T ss_pred EecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHHHhCC
Confidence 322 2111100000 0000 0 01358999999999 99999988765432 344566665554
No 285
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.59 E-value=4.2e-05 Score=67.13 Aligned_cols=100 Identities=14% Similarity=0.102 Sum_probs=61.5
Q ss_pred CeEEEEcCccc--cc---CcCC---------------CCcEEEEeCCHHHHHHHHHHhc---------------------
Q psy13086 19 VEFVDVGCGKL--YL---PMFP---------------STLILGLEIRVKVSDYVIDEWS--------------------- 57 (169)
Q Consensus 19 ~~iLDiGCG~G--la---~~~p---------------~~~v~GiDis~~~l~~a~~~~~--------------------- 57 (169)
.+|||.+||+| +. .... ..+++|+|+++.+++.|+.++.
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 48999999999 11 1111 4589999999999999987642
Q ss_pred --cccceEEEeCCCCcccccchh-------hh------------c-----ccHHHHHHHHHhccCCcEEEEEeCChH---
Q psy13086 58 --LYLKKMFFLYPDPHFKRCKYK-------WR------------I-----INQNLLSEYAYVLSEGGIVYTITDVKD--- 108 (169)
Q Consensus 58 --~~~d~v~~~f~d~~f~~~h~~-------~~------------~-----~~~~~l~~~~rvLkpGG~l~i~~d~~~--- 108 (169)
..+|.|.. +|-|....+. .+ + ..-.+++.+.+.|||||++.++++...
T Consensus 326 ~~~~fD~Iv~---NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~ 402 (544)
T 3khk_A 326 PDLRADFVMT---NPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSS 402 (544)
T ss_dssp TTCCEEEEEE---CCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHC
T ss_pred ccccccEEEE---CCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhc
Confidence 22444433 2222211000 00 0 012689999999999999998875432
Q ss_pred ---HHHHHHHHHhcCC
Q psy13086 109 ---LHDWIVSHFTEHP 121 (169)
Q Consensus 109 ---~~~~~~~~~~~~~ 121 (169)
....+++.+.++.
T Consensus 403 ~~~~~~~iRk~Lle~~ 418 (544)
T 3khk_A 403 NTNNEGEIRKTLVEQD 418 (544)
T ss_dssp CGGGHHHHHHHHHHTT
T ss_pred CcchHHHHHHHHHhCC
Confidence 2344566665554
No 286
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.47 E-value=0.0001 Score=59.97 Aligned_cols=87 Identities=10% Similarity=-0.004 Sum_probs=50.1
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHH------HHhc-------------cccceEEEeCCCCcc
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVI------DEWS-------------LYLKKMFFLYPDPHF 72 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~------~~~~-------------~~~d~v~~~f~d~~f 72 (169)
+..+||||||++| +++..+-..|+|+|++..+..... .++- ..+|.|.. |-.+
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVls---D~AP 157 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLC---DIGE 157 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEE---CCCC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEee---cCcC
Confidence 3689999999999 454445568999999864311110 0100 23444432 2111
Q ss_pred c-ccchhhhcccHHHHHHHHHhccCC-cEEEEEeCC
Q psy13086 73 K-RCKYKWRIINQNLLSEYAYVLSEG-GIVYTITDV 106 (169)
Q Consensus 73 ~-~~h~~~~~~~~~~l~~~~rvLkpG-G~l~i~~d~ 106 (169)
+ ..+.....-+..+|+-+.++|+|| |.|++..-.
T Consensus 158 nsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 158 SSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 1 111111111234688889999999 999998644
No 287
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.40 E-value=9.2e-05 Score=59.15 Aligned_cols=32 Identities=19% Similarity=0.133 Sum_probs=26.0
Q ss_pred CeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHH
Q psy13086 19 VEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYV 52 (169)
Q Consensus 19 ~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a 52 (169)
.+|||+|||+| +|.+ +.+|+|||+++.+++.+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~ 126 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALL 126 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHH
Confidence 78999999999 5555 56899999999765444
No 288
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.31 E-value=8.7e-05 Score=66.95 Aligned_cols=38 Identities=11% Similarity=-0.122 Sum_probs=27.0
Q ss_pred CCeEEEEcCccc-c------cCc--C---------CCCcEEEEeCCHHHHHHHHHH
Q psy13086 18 KVEFVDVGCGKL-Y------LPM--F---------PSTLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 18 ~~~iLDiGCG~G-l------a~~--~---------p~~~v~GiDis~~~l~~a~~~ 55 (169)
...|||||||+| | |.. . ...+|++||.|+.++..++.+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~ 465 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYM 465 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHH
Confidence 468999999999 3 111 1 234999999999777655543
No 289
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.28 E-value=0.00021 Score=63.89 Aligned_cols=38 Identities=11% Similarity=0.168 Sum_probs=25.6
Q ss_pred CCeEEEEcCccc-c------c-Cc-CCCCcEEEEeCCHHHHHHHHHHh
Q psy13086 18 KVEFVDVGCGKL-Y------L-PM-FPSTLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 18 ~~~iLDiGCG~G-l------a-~~-~p~~~v~GiDis~~~l~~a~~~~ 56 (169)
...|||||||+| | | ++ ....+|++||.|+ |...|++.+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v 404 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENW 404 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHH
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHH
Confidence 357999999999 2 1 11 1224789999997 555665543
No 290
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.97 E-value=0.00045 Score=54.65 Aligned_cols=42 Identities=7% Similarity=-0.037 Sum_probs=34.3
Q ss_pred CCCCeEEEEcCccc---ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 16 EKKVEFVDVGCGKL---YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 16 ~~~~~iLDiGCG~G---la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
.++..|||..||+| ++...-+.+++|+|+++.+++.|++|+.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHH
Confidence 45789999999999 3333336799999999999999998864
No 291
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.85 E-value=0.0013 Score=53.11 Aligned_cols=28 Identities=7% Similarity=0.026 Sum_probs=21.9
Q ss_pred CCeEEEEcCccc-----ccCcC-----CCCcEEEEeCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMF-----PSTLILGLEIR 45 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~-----p~~~v~GiDis 45 (169)
...|||+||.+| ++... ++.+++++|..
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~Dtf 144 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSF 144 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECS
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECC
Confidence 578999999999 33322 57899999975
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.83 E-value=0.00081 Score=54.47 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=30.8
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~ 54 (169)
+..+||.+||.| ++++ +..|+|+|.++.+++.|++
T Consensus 23 gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh
Confidence 679999999999 4444 6799999999999999986
No 293
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.79 E-value=0.0002 Score=52.83 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=34.8
Q ss_pred CCeEEEEcCccc--ccCc---CCCCcEEEEeCCHHHHHHHHHHhc-------cccceEEEeCCCC
Q psy13086 18 KVEFVDVGCGKL--YLPM---FPSTLILGLEIRVKVSDYVIDEWS-------LYLKKMFFLYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G--la~~---~p~~~v~GiDis~~~l~~a~~~~~-------~~~d~v~~~f~d~ 70 (169)
..+|||||||.| .|.. ..+..|+++|+++..++..+..+- ..+|.|+..-|.+
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~~v~dDiF~P~~~~Y~~~DLIYsirPP~ 100 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGGIVRDDITSPRMEIYRGAALIYSIRPPA 100 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTTEECCCSSSCCHHHHTTEEEEEEESCCT
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccceEEccCCCCcccccCCcCEEEEcCCCH
Confidence 469999999999 3322 256789999999987762222211 3667765544444
No 294
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.38 E-value=0.0088 Score=48.90 Aligned_cols=22 Identities=18% Similarity=0.172 Sum_probs=18.8
Q ss_pred cccHHHHHHHHHhccCCcEEEE
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYT 102 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i 102 (169)
+-.+++++.++++++|||+|.-
T Consensus 203 LWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 203 LWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp GGSHHHHHHHHTTEEEEEEEEE
T ss_pred cCCHHHHHHHHHHhCCCcEEEE
Confidence 3458999999999999999863
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.24 E-value=0.0039 Score=50.83 Aligned_cols=86 Identities=9% Similarity=-0.029 Sum_probs=47.9
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHH------HHHHHHHHh------------c-cccceEEEeCC--CCc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVK------VSDYVIDEW------------S-LYLKKMFFLYP--DPH 71 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~------~l~~a~~~~------------~-~~~d~v~~~f~--d~~ 71 (169)
...||||||++| .+....-..|+|+|+-.. |++..--++ + ..+|.+..... +|.
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~D~ivcDigeSs~~ 174 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECCDTLLCDIGESSSS 174 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCCSEEEECCCCCCSC
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCCCEEEEECccCCCC
Confidence 569999999999 334444457999999865 111100011 0 23444433221 111
Q ss_pred ccccchhhhcccHHHHHHHHHhccCC-cEEEEEeCCh
Q psy13086 72 FKRCKYKWRIINQNLLSEYAYVLSEG-GIVYTITDVK 107 (169)
Q Consensus 72 f~~~h~~~~~~~~~~l~~~~rvLkpG-G~l~i~~d~~ 107 (169)
... ...|. -.+|+-+.+.|++| |.|++..-.+
T Consensus 175 ~~v-e~~Rt---l~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 175 AEV-EEHRT---IRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp HHH-HHHHH---HHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred hhh-hhhHH---HHHHHHHHHHhccCCCcEEEEEcCC
Confidence 110 01111 23778888999999 9999886554
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.65 E-value=0.063 Score=46.73 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=29.1
Q ss_pred CCeEEEEcCccc--cc-------CcC---------CCCcEEEEeCCHHHHHHHHHH
Q psy13086 18 KVEFVDVGCGKL--YL-------PMF---------PSTLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 18 ~~~iLDiGCG~G--la-------~~~---------p~~~v~GiDis~~~l~~a~~~ 55 (169)
+.+|+|-.|||| |. ... ...+++|+|+++.++..|+-+
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 568999999999 21 111 135799999999999988754
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.04 E-value=0.055 Score=43.21 Aligned_cols=22 Identities=18% Similarity=0.006 Sum_probs=17.8
Q ss_pred HHHHHHHhccCCc-EEEEEeCCh
Q psy13086 86 LLSEYAYVLSEGG-IVYTITDVK 107 (169)
Q Consensus 86 ~l~~~~rvLkpGG-~l~i~~d~~ 107 (169)
+|+-+.++|+||| .|++..-.+
T Consensus 164 aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 164 ILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp HHHHHHHHHTTCCSEEEEEESCT
T ss_pred HHHHHHHHhhcCCcEEEEEECCC
Confidence 6777789999999 898876443
No 298
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.81 E-value=0.08 Score=46.92 Aligned_cols=24 Identities=33% Similarity=0.461 Sum_probs=19.8
Q ss_pred cccHHHHHHHHHhccCCcEEEEEe
Q psy13086 81 IINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 81 ~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+-..++++.++++++|||++.--+
T Consensus 196 ~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 196 MWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp GSCHHHHHHHHHHEEEEEEEEESC
T ss_pred hhhHHHHHHHHHHhCCCCEEEecc
Confidence 345889999999999999987544
No 299
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.53 E-value=0.034 Score=46.79 Aligned_cols=41 Identities=10% Similarity=-0.028 Sum_probs=33.4
Q ss_pred CCCeEEEEcCccc-----cc-CcCCC-CcEEEEeCCHHHHHHHHHHhc
Q psy13086 17 KKVEFVDVGCGKL-----YL-PMFPS-TLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la-~~~p~-~~v~GiDis~~~l~~a~~~~~ 57 (169)
++..++|||++.| ++ ...+. .+|+++|+++...+..++++.
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~ 273 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLR 273 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 4789999999999 34 44554 799999999999988877654
No 300
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=94.45 E-value=0.074 Score=39.46 Aligned_cols=79 Identities=11% Similarity=0.051 Sum_probs=47.6
Q ss_pred CeEEEEcCccc-----ccCcCCCCcEEEEeCCH-------------------HHHHHHHHHhccccceEEEeCCCCcccc
Q psy13086 19 VEFVDVGCGKL-----YLPMFPSTLILGLEIRV-------------------KVSDYVIDEWSLYLKKMFFLYPDPHFKR 74 (169)
Q Consensus 19 ~~iLDiGCG~G-----la~~~p~~~v~GiDis~-------------------~~l~~a~~~~~~~~d~v~~~f~d~~f~~ 74 (169)
.-|||+|-|+| |.+.+|+..++.+|-.. +++..|..++......++..+-....+
T Consensus 42 GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~g~~~- 120 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERFGATASLVHADLGGHNRE- 120 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEEEECCCCSCHH-
T ss_pred CceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhcCCceEEEEeecCCCCcc-
Confidence 45999999999 88889999999999643 244545455544444444332211100
Q ss_pred cchhhhcccHHHHHHHHHhccCCcEEE
Q psy13086 75 CKYKWRIINQNLLSEYAYVLSEGGIVY 101 (169)
Q Consensus 75 ~h~~~~~~~~~~l~~~~rvLkpGG~l~ 101 (169)
+.......+-..+..+|.|||.++
T Consensus 121 ---~d~a~a~~lsplI~~~la~GGi~v 144 (174)
T 3iht_A 121 ---KNDRFARLISPLIEPHLAQGGLMV 144 (174)
T ss_dssp ---HHHHHHHHHHHHHGGGEEEEEEEE
T ss_pred ---hhHHHHHhhhHHHHHHhcCCcEEE
Confidence 000011234455678999999875
No 301
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=94.40 E-value=0.044 Score=45.42 Aligned_cols=36 Identities=11% Similarity=0.055 Sum_probs=31.3
Q ss_pred CCeEEEEcCccc-----ccCc-CCCCcEEEEeCCHHHHHHHH
Q psy13086 18 KVEFVDVGCGKL-----YLPM-FPSTLILGLEIRVKVSDYVI 53 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~-~p~~~v~GiDis~~~l~~a~ 53 (169)
+..+||..||.| +++. .|+..|+|+|.++.+++.|+
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 678999999999 5555 47789999999999999884
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.38 E-value=0.029 Score=46.57 Aligned_cols=39 Identities=13% Similarity=0.177 Sum_probs=31.0
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHh
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~ 56 (169)
+..|||||.|.| |+.+....++++||++..++...++..
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc
Confidence 578999999999 443323358999999999998887754
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.25 E-value=0.058 Score=44.13 Aligned_cols=87 Identities=16% Similarity=0.113 Sum_probs=49.4
Q ss_pred CCeEEEEcC------ccc---ccCcCCC-CcEEEEeCCHHHHHHHHHHhc---------cccceEEEeCCCCcccccch-
Q psy13086 18 KVEFVDVGC------GKL---YLPMFPS-TLILGLEIRVKVSDYVIDEWS---------LYLKKMFFLYPDPHFKRCKY- 77 (169)
Q Consensus 18 ~~~iLDiGC------G~G---la~~~p~-~~v~GiDis~~~l~~a~~~~~---------~~~d~v~~~f~d~~f~~~h~- 77 (169)
+.+|||+|+ -.| +.+..|. +.++++|+.+-... +..-+. ..+|.|...-.++.-.....
T Consensus 110 gmrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~sd-a~~~IqGD~~~~~~~~k~DLVISDMAPNtTG~~D~d 188 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSD-ADSTLIGDCATVHTANKWDLIISDMYDPRTKHVTKE 188 (344)
T ss_dssp TCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBCS-SSEEEESCGGGEEESSCEEEEEECCCCTTSCSSCSC
T ss_pred CCEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCcccccC-CCeEEEccccccccCCCCCEEEecCCCCcCCccccc
Confidence 579999996 445 5556676 69999999872210 000011 33554443221111111100
Q ss_pred h-hhc-ccHHHHHHHHHhccCCcEEEEEeC
Q psy13086 78 K-WRI-INQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 78 ~-~~~-~~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
. +.+ ..+.+++-+.++|+|||.|++...
T Consensus 189 ~~Rs~~L~ElALdfA~~~LkpGGsFvVKVF 218 (344)
T 3r24_A 189 NDSKEGFFTYLCGFIKQKLALGGSIAVKIT 218 (344)
T ss_dssp CCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhHHHHHHHHHHHHHHHhCcCCCEEEEEEe
Confidence 0 111 246778888899999999999853
No 304
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.10 E-value=0.027 Score=45.80 Aligned_cols=42 Identities=14% Similarity=0.038 Sum_probs=34.9
Q ss_pred CCCCeEEEEcCccc---ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 16 EKKVEFVDVGCGKL---YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 16 ~~~~~iLDiGCG~G---la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
.++..|||-=||+| ++...-+.+++|+|+++.+++.|++|+.
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~r~~ 295 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAFRFL 295 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHGGGS
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHHHHH
Confidence 45789999999999 3333346799999999999999999875
No 305
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=93.33 E-value=0.036 Score=43.99 Aligned_cols=30 Identities=20% Similarity=0.287 Sum_probs=23.2
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVK 47 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~ 47 (169)
...||||||++| .+.......|+|+|+-..
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ 113 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGP 113 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCST
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCC
Confidence 569999999999 344444458999999753
No 306
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.98 E-value=0.15 Score=45.44 Aligned_cols=23 Identities=30% Similarity=0.408 Sum_probs=19.0
Q ss_pred ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
-...+++.++++++|||++.--+
T Consensus 189 w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 189 WNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp CSHHHHHHHHHHEEEEEEEEESC
T ss_pred hhHHHHHHHHHHhCCCCEEEecc
Confidence 35789999999999999986433
No 307
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=92.45 E-value=0.059 Score=45.11 Aligned_cols=28 Identities=11% Similarity=0.076 Sum_probs=22.7
Q ss_pred CCCeEEEEcCccc-----ccCcCCCCcEEEEeCCH
Q psy13086 17 KKVEFVDVGCGKL-----YLPMFPSTLILGLEIRV 46 (169)
Q Consensus 17 ~~~~iLDiGCG~G-----la~~~p~~~v~GiDis~ 46 (169)
++.++||+||.+| ++++ +..|+|||+.+
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~ 243 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGP 243 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSC
T ss_pred CCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhh
Confidence 3689999999999 4444 57999999864
No 308
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.24 E-value=0.22 Score=40.69 Aligned_cols=82 Identities=12% Similarity=0.062 Sum_probs=49.6
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccc-ccch----hhhc---
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFK-RCKY----KWRI--- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~-~~h~----~~~~--- 81 (169)
++.+||-+|||. | +|+.. ++ .|+++|.++.-++.|++.- .|.+ +.+.++.+. .... .-++
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~~Vi~~~~~~~~~~~a~~lG---a~~v-i~~~~~~~~~~~~~~~~gg~D~vid 264 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVC-GASIIIAVDIVESRLELAKQLG---ATHV-INSKTQDPVAAIKEITDGGVNFALE 264 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHHHT---CSEE-EETTTSCHHHHHHHHTTSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHcC---CCEE-ecCCccCHHHHHHHhcCCCCcEEEE
Confidence 468899999875 4 44443 44 6999999999888886531 2222 122221110 0000 0000
Q ss_pred -c-cHHHHHHHHHhccCCcEEEEE
Q psy13086 82 -I-NQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 -~-~~~~l~~~~rvLkpGG~l~i~ 103 (169)
+ ....++...+.|++||++++.
T Consensus 265 ~~g~~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 265 STGSPEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp CSCCHHHHHHHHHTEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEe
Confidence 1 256889999999999999875
No 309
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.78 E-value=0.069 Score=43.48 Aligned_cols=42 Identities=5% Similarity=-0.077 Sum_probs=34.0
Q ss_pred CCCCeEEEEcCccc---ccCcCCCCcEEEEeCCH---HHHHHHHHHhc
Q psy13086 16 EKKVEFVDVGCGKL---YLPMFPSTLILGLEIRV---KVSDYVIDEWS 57 (169)
Q Consensus 16 ~~~~~iLDiGCG~G---la~~~p~~~v~GiDis~---~~l~~a~~~~~ 57 (169)
.++..|||-=||+| +|...-+.+++|+|+++ .+++.|++|+.
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHHHHC-
T ss_pred CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHHHHHH
Confidence 45789999999999 33333367999999999 99999999986
No 310
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=90.44 E-value=0.53 Score=37.79 Aligned_cols=82 Identities=11% Similarity=-0.015 Sum_probs=50.3
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc-c-------h-hhhc
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC-K-------Y-KWRI 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~-h-------~-~~~~ 81 (169)
++.+||-+|+|. | +++.. +++|+++|.|+.-++.+++- ..|.+ +.+.++.+... . . ....
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l---Ga~~~-i~~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL---GAEVA-VNARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT---TCSEE-EETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc---CCCEE-EeCCCcCHHHHHHHhCCCCCEEEEeC
Confidence 467888899864 4 45544 56999999999988887652 12222 12222111000 0 0 0000
Q ss_pred ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.....++...+.|+|||++++.
T Consensus 241 g~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 241 VSPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp CCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCHHHHHHHHHHhccCCEEEEe
Confidence 1367899999999999999875
No 311
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.41 E-value=0.62 Score=37.62 Aligned_cols=73 Identities=10% Similarity=0.074 Sum_probs=47.5
Q ss_pred CCCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhc---------------------cccceEEEeC
Q psy13086 16 EKKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWS---------------------LYLKKMFFLY 67 (169)
Q Consensus 16 ~~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~---------------------~~~d~v~~~f 67 (169)
.++.+||=+|+|. | +|+.. ++ +|+++|.+++-++.+++--. ..+|.+.-..
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~ 243 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAG 243 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 3467899999864 3 44443 45 89999999988887765210 0122221110
Q ss_pred CCCcccccchhhhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 68 PDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 68 ~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
. .+..++...+.|+|||++++.
T Consensus 244 g--------------~~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 244 G--------------DVHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp S--------------CTTHHHHHHHHEEEEEEEEEC
T ss_pred C--------------ChHHHHHHHHHHhcCCEEEEe
Confidence 0 135788999999999999865
No 312
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=89.47 E-value=0.62 Score=37.88 Aligned_cols=57 Identities=11% Similarity=0.013 Sum_probs=39.2
Q ss_pred CCCeEEEEcCccc---ccCcCCCC-cEEEEeCCHHHHHHHHHHhc---------------cccceEEEeCCCCccc
Q psy13086 17 KKVEFVDVGCGKL---YLPMFPST-LILGLEIRVKVSDYVIDEWS---------------LYLKKMFFLYPDPHFK 73 (169)
Q Consensus 17 ~~~~iLDiGCG~G---la~~~p~~-~v~GiDis~~~l~~a~~~~~---------------~~~d~v~~~f~d~~f~ 73 (169)
+..++||+-||.| ++-...+. .+.++|+++.+++..+.|.+ ..+|.+..-+|=..|.
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~~~Di~~~~~~~~~~~D~l~~gpPCQ~fS 85 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAGFPCQAFS 85 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCCBSCGGGSCGGGSCCCSEEEEECCCTTTC
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCCcCCHHHcCHhhCCCCCEEEECCCCCCcc
Confidence 3578999999999 22222233 58889999999998887753 2466666655544444
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=89.18 E-value=1.3 Score=35.83 Aligned_cols=82 Identities=7% Similarity=0.077 Sum_probs=49.1
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCC--C-Ccc-cccch----hhhc
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYP--D-PHF-KRCKY----KWRI 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~--d-~~f-~~~h~----~~~~ 81 (169)
++.+||-+|+|. | +|+.. ++ +|+++|.++.-++.+++- ..|.+ +.+. + ..+ +.... .-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l---Ga~~v-i~~~~~~~~~~~~~i~~~~~~g~D~ 245 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEI---GADLV-LQISKESPQEIARKVEGQLGCKPEV 245 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT---TCSEE-EECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh---CCCEE-EcCcccccchHHHHHHHHhCCCCCE
Confidence 467899999864 4 55554 45 899999999888877642 12222 1222 0 100 00000 0001
Q ss_pred ----c-cHHHHHHHHHhccCCcEEEEE
Q psy13086 82 ----I-NQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ----~-~~~~l~~~~rvLkpGG~l~i~ 103 (169)
+ .+..++...+.|+|||++++.
T Consensus 246 vid~~g~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 246 TIECTGAEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp EEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCCChHHHHHHHHHhcCCCEEEEE
Confidence 1 256788999999999999875
No 314
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=89.14 E-value=0.77 Score=36.79 Aligned_cols=83 Identities=11% Similarity=-0.026 Sum_probs=50.8
Q ss_pred CCCeEEEEcCccc------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc-----------chhh
Q psy13086 17 KKVEFVDVGCGKL------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC-----------KYKW 79 (169)
Q Consensus 17 ~~~~iLDiGCG~G------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~-----------h~~~ 79 (169)
++.+||=+|+|.+ +++.....+|+++|.+++-++.+++-- .|.+ +.+.++.+... ....
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~G---a~~~-i~~~~~~~~~~v~~~t~g~g~d~~~~ 238 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIG---ADVT-INSGDVNPVDEIKKITGGLGVQSAIV 238 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTT---CSEE-EEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcC---CeEE-EeCCCCCHHHHhhhhcCCCCceEEEE
Confidence 3678888999876 444455789999999998777776531 1111 12222111000 0000
Q ss_pred hcccHHHHHHHHHhccCCcEEEEE
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.......+....+.|+++|++.+.
T Consensus 239 ~~~~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 239 CAVARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp CCSCHHHHHHHHHTEEEEEEEEEC
T ss_pred eccCcchhheeheeecCCceEEEE
Confidence 012367889999999999999875
No 315
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=88.29 E-value=0.47 Score=38.77 Aligned_cols=40 Identities=3% Similarity=0.058 Sum_probs=29.9
Q ss_pred CCeEEEEcCccc---ccCcCCC---CcEEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL---YLPMFPS---TLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G---la~~~p~---~~v~GiDis~~~l~~a~~~~~ 57 (169)
..++||+-||.| ++....+ ..+.++|+++.+++..+.|.+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~ 47 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP 47 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc
Confidence 457999999999 2222122 369999999999999887753
No 316
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.15 E-value=0.74 Score=37.01 Aligned_cols=83 Identities=8% Similarity=0.012 Sum_probs=50.7
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccccc-h----hhhc----
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRCK-Y----KWRI---- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~h-~----~~~~---- 81 (169)
++.+||=+|+|. | +++.....+|+++|.++.-++.+++- ..|.+ +.+.+.+.+... . .-++
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l---Ga~~~-i~~~~~~~~~v~~~t~g~g~d~v~d~ 246 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV---GADAA-VKSGAGAADAIRELTGGQGATAVFDF 246 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT---TCSEE-EECSTTHHHHHHHHHGGGCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc---CCCEE-EcCCCcHHHHHHHHhCCCCCeEEEEC
Confidence 468899999854 3 55555567999999999888887652 12222 112111111000 0 0000
Q ss_pred -ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 -INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 -~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
-.+..++...+.|++||++++.
T Consensus 247 ~G~~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 247 VGAQSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp SCCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHhcCCEEEEE
Confidence 1245899999999999999875
No 317
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=87.69 E-value=4.5 Score=27.92 Aligned_cols=83 Identities=11% Similarity=-0.004 Sum_probs=49.9
Q ss_pred CCeEEEEcCcc-c--ccCcC--CCCcEEEEeCCHHHHHHHHHH-hc-----------------cccceEEEeCCCCcccc
Q psy13086 18 KVEFVDVGCGK-L--YLPMF--PSTLILGLEIRVKVSDYVIDE-WS-----------------LYLKKMFFLYPDPHFKR 74 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~~--p~~~v~GiDis~~~l~~a~~~-~~-----------------~~~d~v~~~f~d~~f~~ 74 (169)
..+|+=+|||. | +++.. .+..|+++|.+++.++.+++. +. ...|.+.+..+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~--- 83 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY--- 83 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH---
Confidence 45788899986 4 44332 357999999999988877642 10 23333333333321
Q ss_pred cchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHHH
Q psy13086 75 CKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLHD 111 (169)
Q Consensus 75 ~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~~ 111 (169)
....+-...+.+.|+..++.....+.+.+
T Consensus 84 --------~n~~~~~~a~~~~~~~~iiar~~~~~~~~ 112 (140)
T 3fwz_A 84 --------EAGEIVASARAKNPDIEIIARAHYDDEVA 112 (140)
T ss_dssp --------HHHHHHHHHHHHCSSSEEEEEESSHHHHH
T ss_pred --------HHHHHHHHHHHHCCCCeEEEEECCHHHHH
Confidence 01234445677778888777666666554
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=87.04 E-value=0.65 Score=34.06 Aligned_cols=83 Identities=7% Similarity=-0.072 Sum_probs=47.5
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-c-c-----hhhhc-
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-C-K-----YKWRI- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~-h-----~~~~~- 81 (169)
++.+||.+|++.| ++.. .+++|+++|.+++.++.+++. . .+.+ +.+.++.+.. . . ...-+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~-~G~~V~~~~~~~~~~~~~~~~-g--~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi 112 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKM-IGARIYTTAGSDAKREMLSRL-G--VEYV-GDSRSVDFADEILELTDGYGVDVVL 112 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-HTCEEEEEESSHHHHHHHHTT-C--CSEE-EETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHc-C--CCEE-eeCCcHHHHHHHHHHhCCCCCeEEE
Confidence 4688999997555 2222 357899999999877766531 1 1211 1222211100 0 0 00000
Q ss_pred --ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 --INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 --~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.....++...+.|+|||++++..
T Consensus 113 ~~~g~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 113 NSLAGEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp ECCCTHHHHHHHHTEEEEEEEEECS
T ss_pred ECCchHHHHHHHHHhccCCEEEEEc
Confidence 12467888999999999998754
No 319
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=86.94 E-value=0.25 Score=50.38 Aligned_cols=84 Identities=14% Similarity=0.025 Sum_probs=35.7
Q ss_pred CCeEEEEcCccc-ccCc-------CC--CCcEEEEeCCHHHHHHHHHHhccccceEE--E------eCCCCcccc-----
Q psy13086 18 KVEFVDVGCGKL-YLPM-------FP--STLILGLEIRVKVSDYVIDEWSLYLKKMF--F------LYPDPHFKR----- 74 (169)
Q Consensus 18 ~~~iLDiGCG~G-la~~-------~p--~~~v~GiDis~~~l~~a~~~~~~~~d~v~--~------~f~d~~f~~----- 74 (169)
..+|||||.||| +... .| ..+++-.|+|+...+.|+++++ .+|.-. + .|....+|.
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~-~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLE-QLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHH-HHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhh-hcccccccccccccccCCCCceeEEEEcc
Confidence 468999999999 2111 12 2368888999887777766543 111110 0 000111121
Q ss_pred -cchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 75 -CKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 75 -~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.|.... ....+++++++|||||.+++..
T Consensus 1320 vl~~t~~--~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1320 ALATLGD--PAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp C----------------------CCEEEEEE
T ss_pred ccccccc--HHHHHHHHHHhcCCCcEEEEEe
Confidence 122211 2468999999999999998864
No 320
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=86.92 E-value=2.3 Score=34.32 Aligned_cols=83 Identities=8% Similarity=0.012 Sum_probs=47.9
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCC---Cccc-ccc-h----hhh
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD---PHFK-RCK-Y----KWR 80 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d---~~f~-~~h-~----~~~ 80 (169)
++.+||=+|+|. | +|+.. ++ .|+++|.|+.-++.|++-....++ ....+ ..+. ... . .-.
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l~~~~~~---~~~~~~~~~~~~~~v~~~t~g~g~D 254 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEICPEVVT---HKVERLSAEESAKKIVESFGGIEPA 254 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHHCTTCEE---EECCSCCHHHHHHHHHHHTSSCCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhchhccc---ccccccchHHHHHHHHHHhCCCCCC
Confidence 467888899853 3 55554 45 499999999988888764211111 11100 0000 000 0 000
Q ss_pred c-----ccHHHHHHHHHhccCCcEEEEE
Q psy13086 81 I-----INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 81 ~-----~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
+ -.+..++...+.|++||++++.
T Consensus 255 vvid~~g~~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 255 VALECTGVESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp EEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCChHHHHHHHHHhcCCCEEEEE
Confidence 0 1245889999999999999875
No 321
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.02 E-value=0.73 Score=37.14 Aligned_cols=83 Identities=17% Similarity=0.167 Sum_probs=50.0
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccc----cc---chhhhcc
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFK----RC---KYKWRII 82 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~----~~---h~~~~~~ 82 (169)
++.+||-+|+|.| ++....+++|+++|.++..++.+++- . .+.+ +.+.++.+. .. ....-++
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g--~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi 245 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-G--ADYV-INASMQDPLAEIRRITESKGVDAVI 245 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-T--CSEE-EETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-C--CCEE-ecCCCccHHHHHHHHhcCCCceEEE
Confidence 4688999999877 33333367999999999888877542 1 2221 122222110 00 0000000
Q ss_pred ----cHHHHHHHHHhccCCcEEEEE
Q psy13086 83 ----NQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 83 ----~~~~l~~~~rvLkpGG~l~i~ 103 (169)
....++...+.|+|+|++++.
T Consensus 246 ~~~g~~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 246 DLNNSEKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp ESCCCHHHHTTGGGGEEEEEEEEEC
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 245888899999999999875
No 322
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.78 E-value=1.2 Score=36.48 Aligned_cols=83 Identities=7% Similarity=0.073 Sum_probs=47.4
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcc-cccchhhhc----c-cH
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHF-KRCKYKWRI----I-NQ 84 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f-~~~h~~~~~----~-~~ 84 (169)
++.+||-+|+|. | +|+.. +++|+++|.|+.-++.+++ +. .|.+ +.+.++.+ ......-++ + .+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~-lG--a~~v-i~~~~~~~~~~~~~g~Dvvid~~g~~ 268 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA-LG--ADEV-VNSRNADEMAAHLKSFDFILNTVAAP 268 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH-HT--CSEE-EETTCHHHHHTTTTCEEEEEECCSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-cC--CcEE-eccccHHHHHHhhcCCCEEEECCCCH
Confidence 468899999864 4 44443 5689999999988887765 21 1221 11111100 000000000 0 12
Q ss_pred HHHHHHHHhccCCcEEEEEe
Q psy13086 85 NLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 85 ~~l~~~~rvLkpGG~l~i~~ 104 (169)
..++...+.|+|||++++..
T Consensus 269 ~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 269 HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CCHHHHHTTEEEEEEEEECC
T ss_pred HHHHHHHHHhccCCEEEEec
Confidence 35778889999999998753
No 323
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.66 E-value=1.9 Score=34.33 Aligned_cols=85 Identities=7% Similarity=0.107 Sum_probs=50.5
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc---------chhh
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC---------KYKW 79 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~---------h~~~ 79 (169)
.++.+||-+|++.| +++. -+++|+++|.++.-++.+.+.+. .+.+ +.+.++.+... ...-
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~-~Ga~Vi~~~~~~~~~~~~~~~~g--~~~~-~~~~~~~~~~~~~~~~~~~~d~vi 223 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARL-KGCRVVGIAGGAEKCRFLVEELG--FDGA-IDYKNEDLAAGLKRECPKGIDVFF 223 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHTTC--CSEE-EETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHcC--CCEE-EECCCHHHHHHHHHhcCCCceEEE
Confidence 44789999999655 3343 35699999999988877744332 1221 12222111100 0000
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.......++...+.|++||++++..
T Consensus 224 ~~~g~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 224 DNVGGEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp ESSCHHHHHHHHTTEEEEEEEEECC
T ss_pred ECCCcchHHHHHHHHhhCCEEEEEe
Confidence 0012457889999999999998753
No 324
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=83.51 E-value=1.1 Score=35.91 Aligned_cols=38 Identities=8% Similarity=0.190 Sum_probs=29.1
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHH
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~ 54 (169)
.++.+||-+|+|+| +++. -+++|+++|.++.-++.+++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~-~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQI-LNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-HTCEEEEEESSSTTHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHh
Confidence 44789999999876 3333 35799999999887777765
No 325
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=83.36 E-value=3.7 Score=32.65 Aligned_cols=84 Identities=5% Similarity=-0.042 Sum_probs=50.7
Q ss_pred CCCeEEEEcCccc------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cch---------h-h
Q psy13086 17 KKVEFVDVGCGKL------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CKY---------K-W 79 (169)
Q Consensus 17 ~~~~iLDiGCG~G------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h~---------~-~ 79 (169)
++.+||=+|+|.. +++......++++|.+++-++.|++- ..|.+ +.+.+..+.. ... . .
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l---Ga~~~-i~~~~~~~~~~~~~~~~~~g~d~v~d 235 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF---GAMQT-FNSSEMSAPQMQSVLRELRFNQLILE 235 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---TCSEE-EETTTSCHHHHHHHHGGGCSSEEEEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc---CCeEE-EeCCCCCHHHHHHhhcccCCcccccc
Confidence 4678999998765 55555445789999999888877652 11211 1222211110 000 0 0
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..-.+..++...+.|++||++.+..
T Consensus 236 ~~G~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 236 TAGVPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp CSCSHHHHHHHHHHCCTTCEEEECC
T ss_pred cccccchhhhhhheecCCeEEEEEe
Confidence 0013678999999999999998753
No 326
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=83.17 E-value=2.5 Score=33.84 Aligned_cols=81 Identities=12% Similarity=0.117 Sum_probs=48.2
Q ss_pred CCCeEEEEcCcc-c-----ccCc-CCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCC-C----------cccccchh
Q psy13086 17 KKVEFVDVGCGK-L-----YLPM-FPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD-P----------HFKRCKYK 78 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~-~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d-~----------~f~~~h~~ 78 (169)
++.+||-+|+|. | +|+. +|+++|+++|.|+.-++.+++- . .|.+. .+.+ + -+|.. .
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-G--a~~vi-~~~~~~~~~~~~~~g~g~D~v--i 243 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-G--ADYVS-EMKDAESLINKLTDGLGASIA--I 243 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-T--CSEEE-CHHHHHHHHHHHHTTCCEEEE--E
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-C--CCEEe-ccccchHHHHHhhcCCCccEE--E
Confidence 368899999953 2 4443 3578999999999888777642 1 11111 1100 0 00000 0
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
...-.+..++...+.|+|||++++.
T Consensus 244 d~~g~~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 244 DLVGTEETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp ESSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred ECCCChHHHHHHHHHhhcCCEEEEe
Confidence 0001245889999999999999875
No 327
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=81.91 E-value=3.8 Score=33.17 Aligned_cols=82 Identities=9% Similarity=-0.010 Sum_probs=48.7
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCC--Ccccc-cch----hhhc-
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD--PHFKR-CKY----KWRI- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d--~~f~~-~h~----~~~~- 81 (169)
++.+||-+|+|. | +|+.. ++ .|+++|.|+.-++.+++- ..|.+ +.+.+ ..+.. ... .-++
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~l---Ga~~v-i~~~~~~~~~~~~~~~~~~~g~D~v 266 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVF---GATDF-VNPNDHSEPISQVLSKMTNGGVDFS 266 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT---TCCEE-ECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHh---CCceE-EeccccchhHHHHHHHHhCCCCCEE
Confidence 467899999753 3 45554 45 899999999888877642 12222 12221 11100 000 0000
Q ss_pred ---c-cHHHHHHHHHhccCC-cEEEEE
Q psy13086 82 ---I-NQNLLSEYAYVLSEG-GIVYTI 103 (169)
Q Consensus 82 ---~-~~~~l~~~~rvLkpG-G~l~i~ 103 (169)
+ ....++...+.|++| |++++.
T Consensus 267 id~~g~~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 267 LECVGNVGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp EECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred EECCCCHHHHHHHHHHhhcCCcEEEEE
Confidence 1 256889999999999 999875
No 328
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=81.91 E-value=2.8 Score=33.33 Aligned_cols=83 Identities=8% Similarity=0.043 Sum_probs=48.7
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCC-Ccccc-cc-----hhhhc
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD-PHFKR-CK-----YKWRI 81 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d-~~f~~-~h-----~~~~~ 81 (169)
.++.+||-.||+.| ++.. .+++|+++|.++..++.+++ +. .+.+ +.+.+ ..+.. .. ...-+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~-~G~~V~~~~~~~~~~~~~~~-~g--~~~~-~d~~~~~~~~~~~~~~~~~~~d~v 218 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKL-KGCKVVGAAGSDEKIAYLKQ-IG--FDAA-FNYKTVNSLEEALKKASPDGYDCY 218 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH-TT--CSEE-EETTSCSCHHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHh-cC--CcEE-EecCCHHHHHHHHHHHhCCCCeEE
Confidence 34688999999656 2333 35699999999988887733 32 1211 22222 11110 00 00000
Q ss_pred ---ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 ---INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ---~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.-...++...+.|++||++++.
T Consensus 219 i~~~g~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 219 FDNVGGEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EESSCHHHHHHHHTTEEEEEEEEEC
T ss_pred EECCChHHHHHHHHHHhcCCEEEEE
Confidence 1135688889999999999875
No 329
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=81.54 E-value=3 Score=33.93 Aligned_cols=85 Identities=7% Similarity=-0.047 Sum_probs=49.9
Q ss_pred CCCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cch-------hhhc
Q psy13086 16 EKKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CKY-------KWRI 81 (169)
Q Consensus 16 ~~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h~-------~~~~ 81 (169)
.++.+||=+|+|. | +|+...-..|+++|.++.-++.|++- ..+.+ +.+.++.+.. ... .-++
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l---Ga~~v-i~~~~~~~~~~i~~~~~~~~gg~Dv 256 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV---GATAT-VDPSAGDVVEAIAGPVGLVPGGVDV 256 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH---TCSEE-ECTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc---CCCEE-ECCCCcCHHHHHHhhhhccCCCCCE
Confidence 3467889899853 3 55554333899999999888877653 12221 1121111100 000 0000
Q ss_pred ----c-cHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 ----I-NQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 ----~-~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+ ....++...+.|++||++++..
T Consensus 257 vid~~G~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 257 VIECAGVAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEECSCCHHHHHHHHHHEEEEEEEEECS
T ss_pred EEECCCCHHHHHHHHHHhccCCEEEEEe
Confidence 1 2578999999999999998863
No 330
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=79.56 E-value=5 Score=32.44 Aligned_cols=82 Identities=11% Similarity=0.032 Sum_probs=48.3
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCC--Cccc-ccch----hhhc-
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD--PHFK-RCKY----KWRI- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d--~~f~-~~h~----~~~~- 81 (169)
++.+||-+|+|. | +|+.. ++ +|+++|.++.-++.+++- . .|.+ +.+.+ ..+. .... .-++
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~l-G--a~~v-i~~~~~~~~~~~~~~~~~~~g~D~v 265 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEV-G--ATEC-VNPQDYKKPIQEVLTEMSNGGVDFS 265 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT-T--CSEE-ECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh-C--CceE-ecccccchhHHHHHHHHhCCCCcEE
Confidence 467899999764 3 44544 45 899999999888877642 1 2222 11211 1010 0000 0000
Q ss_pred ---c-cHHHHHHHHHhccCC-cEEEEE
Q psy13086 82 ---I-NQNLLSEYAYVLSEG-GIVYTI 103 (169)
Q Consensus 82 ---~-~~~~l~~~~rvLkpG-G~l~i~ 103 (169)
+ ....++...+.|++| |++++.
T Consensus 266 id~~g~~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 266 FEVIGRLDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp EECSCCHHHHHHHHHHBCTTTCEEEEC
T ss_pred EECCCCHHHHHHHHHHhhcCCcEEEEe
Confidence 1 257889999999999 999875
No 331
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=79.23 E-value=3.3 Score=33.61 Aligned_cols=84 Identities=13% Similarity=0.051 Sum_probs=48.4
Q ss_pred CCCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCC--CCcccc-cch----hhhc-
Q psy13086 16 EKKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYP--DPHFKR-CKY----KWRI- 81 (169)
Q Consensus 16 ~~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~--d~~f~~-~h~----~~~~- 81 (169)
.++.+||=+|+|. | +|+...-.+|+++|.++.-++.|++- ..|.+ +.+. +..+.. ... .-++
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l---Ga~~v-i~~~~~~~~~~~~i~~~~~gg~D~v 267 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF---GVNEF-VNPKDHDKPIQEVIVDLTDGGVDYS 267 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT---TCCEE-ECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc---CCcEE-EccccCchhHHHHHHHhcCCCCCEE
Confidence 3467899999853 3 44443323899999999888877642 12221 1111 111100 000 0000
Q ss_pred ----ccHHHHHHHHHhccCC-cEEEEE
Q psy13086 82 ----INQNLLSEYAYVLSEG-GIVYTI 103 (169)
Q Consensus 82 ----~~~~~l~~~~rvLkpG-G~l~i~ 103 (169)
-.+..++...+.|++| |++++.
T Consensus 268 id~~g~~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 268 FECIGNVSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp EECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred EECCCCHHHHHHHHHHhhccCCEEEEE
Confidence 1257899999999997 999875
No 332
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=79.19 E-value=3 Score=33.28 Aligned_cols=84 Identities=11% Similarity=0.130 Sum_probs=50.4
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCC-cccc-cch----hhhc-
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDP-HFKR-CKY----KWRI- 81 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~-~f~~-~h~----~~~~- 81 (169)
.++.+||-+|++.| ++.. -+++|+++|.++.-++.+++++. .+.+ +.+.+. .+.. ... .-++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~-~G~~V~~~~~~~~~~~~~~~~~g--~~~~-~d~~~~~~~~~~~~~~~~~~~d~v 229 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKM-MGCYVVGSAGSKEKVDLLKTKFG--FDDA-FNYKEESDLTAALKRCFPNGIDIY 229 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHTSC--CSEE-EETTSCSCSHHHHHHHCTTCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHcC--CceE-EecCCHHHHHHHHHHHhCCCCcEE
Confidence 34688999998555 3333 35799999999988887765432 1221 222221 1110 000 0000
Q ss_pred ---ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 ---INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ---~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.....++...+.|++||++++.
T Consensus 230 i~~~g~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 230 FENVGGKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EESSCHHHHHHHHTTEEEEEEEEEC
T ss_pred EECCCHHHHHHHHHHHhcCCEEEEE
Confidence 1246788999999999999875
No 333
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=78.82 E-value=2.4 Score=34.06 Aligned_cols=83 Identities=6% Similarity=-0.029 Sum_probs=49.0
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCC-Ccccc-cch----hhhc--
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD-PHFKR-CKY----KWRI-- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d-~~f~~-~h~----~~~~-- 81 (169)
++.+||-+|++.| ++.. -+++|+++|.++..++.+++. . .+.+ +.+.+ ..+.. ... .-++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~-~Ga~V~~~~~~~~~~~~~~~~-g--~~~~-~d~~~~~~~~~~~~~~~~~~~D~vi 243 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKA-MGYRVLGIDGGEGKEELFRSI-G--GEVF-IDFTKEKDIVGAVLKATDGGAHGVI 243 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEECSTTHHHHHHHT-T--CCEE-EETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCCcEEEEcCCHHHHHHHHHc-C--CceE-EecCccHhHHHHHHHHhCCCCCEEE
Confidence 4688999999555 3333 356999999998877776542 1 2221 22221 11100 000 0000
Q ss_pred ---ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 ---INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 ---~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
-....++...+.|++||++++..
T Consensus 244 ~~~g~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 244 NVSVSEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp ECSSCHHHHHHHTTSEEEEEEEEECC
T ss_pred ECCCcHHHHHHHHHHHhcCCEEEEEe
Confidence 12478899999999999998753
No 334
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=78.38 E-value=1.6 Score=35.04 Aligned_cols=81 Identities=16% Similarity=0.196 Sum_probs=48.2
Q ss_pred CCCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCC-cccc-cchhhhcc-cHHH
Q psy13086 16 EKKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDP-HFKR-CKYKWRII-NQNL 86 (169)
Q Consensus 16 ~~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~-~f~~-~h~~~~~~-~~~~ 86 (169)
.++.+||=+|+|. | +|+.. +++|+++|.|+.-++.+++. ..|.+. .++ .+.. ....-..+ .+..
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l---Ga~~v~---~~~~~~~~~~D~vid~~g~~~~ 247 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM---GVKHFY---TDPKQCKEELDFIISTIPTHYD 247 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT---TCSEEE---SSGGGCCSCEEEEEECCCSCCC
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc---CCCeec---CCHHHHhcCCCEEEECCCcHHH
Confidence 3468899999864 3 45543 56999999999888877652 123222 111 0000 00000000 1236
Q ss_pred HHHHHHhccCCcEEEEE
Q psy13086 87 LSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 87 l~~~~rvLkpGG~l~i~ 103 (169)
++...+.|+|||++++.
T Consensus 248 ~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 248 LKDYLKLLTYNGDLALV 264 (348)
T ss_dssp HHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHhcCCEEEEE
Confidence 78888999999999886
No 335
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=78.26 E-value=3.9 Score=33.17 Aligned_cols=103 Identities=12% Similarity=0.031 Sum_probs=57.9
Q ss_pred CCeEEEEcCccc---ccCcCCC---CcE-EEEeCCHHHHHHHHHHhc------------------cccceEEEeCCCCcc
Q psy13086 18 KVEFVDVGCGKL---YLPMFPS---TLI-LGLEIRVKVSDYVIDEWS------------------LYLKKMFFLYPDPHF 72 (169)
Q Consensus 18 ~~~iLDiGCG~G---la~~~p~---~~v-~GiDis~~~l~~a~~~~~------------------~~~d~v~~~f~d~~f 72 (169)
..+++|+-||.| ++-...+ ..+ .++|+++.+++..+.|.+ ..+|.+..-+|=..|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 458999999999 2222222 345 699999999988777643 146766666664555
Q ss_pred --cccchhhhc--ccHHHHHHHHH-hccC---CcEEEEEeCChH-----HHHHHHHHHhcC
Q psy13086 73 --KRCKYKWRI--INQNLLSEYAY-VLSE---GGIVYTITDVKD-----LHDWIVSHFTEH 120 (169)
Q Consensus 73 --~~~h~~~~~--~~~~~l~~~~r-vLkp---GG~l~i~~d~~~-----~~~~~~~~~~~~ 120 (169)
......+.. ....++.++.| +++. .-.+++...++. ....+.+.+.+.
T Consensus 90 s~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~~~~~~i~~~l~~~ 150 (327)
T 3qv2_A 90 NNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKESLVFKEIYNILIKN 150 (327)
T ss_dssp SHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGSHHHHHHHHHHHHT
T ss_pred ccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcChHHHHHHHHHHHhC
Confidence 321111111 11346677777 5542 234555544433 344455555543
No 336
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=77.99 E-value=6.5 Score=31.45 Aligned_cols=82 Identities=6% Similarity=0.015 Sum_probs=49.7
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCC-Cc-ccccch-h-------hh
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD-PH-FKRCKY-K-------WR 80 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d-~~-f~~~h~-~-------~~ 80 (169)
++.+||-+|+|. | +++.. +++|+++|.++.-++.+++- ..|.+ +.+.+ .. .+.... . -+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l---Ga~~~-~~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC---GADVT-LVVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT---TCSEE-EECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh---CCCEE-EcCcccccHHHHHHHHhccccCCCCC
Confidence 467899999863 3 44443 56799999999888887642 22322 22321 11 111000 0 01
Q ss_pred cc-----cHHHHHHHHHhccCCcEEEEE
Q psy13086 81 II-----NQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 81 ~~-----~~~~l~~~~rvLkpGG~l~i~ 103 (169)
++ ....++...+.|+|||++++.
T Consensus 243 ~vid~~g~~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 243 VTIDCSGNEKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp EEEECSCCHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 11 256789999999999999875
No 337
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=77.96 E-value=4.6 Score=32.32 Aligned_cols=83 Identities=7% Similarity=-0.074 Sum_probs=48.6
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cch-----hhhc--
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CKY-----KWRI-- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h~-----~~~~-- 81 (169)
++.+||-+|+|. | +++.. ++ +|+++|.+++-++.+++- . .|.+ +.+.++.+.. ... .-++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~-G--a~~~-~~~~~~~~~~~v~~~~~g~g~D~vi 241 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKV-G--ADYV-INPFEEDVVKEVMDITDGNGVDVFL 241 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHH-T--CSEE-ECTTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-C--CCEE-ECCCCcCHHHHHHHHcCCCCCCEEE
Confidence 367899999942 2 44444 45 899999999887777642 1 2221 1222111100 000 0000
Q ss_pred ---ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 ---INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 ---~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
-....++...+.|+++|+++...
T Consensus 242 d~~g~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 242 EFSGAPKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp ECSCCHHHHHHHHHHEEEEEEEEECC
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEc
Confidence 02478899999999999998753
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=77.57 E-value=5.3 Score=32.23 Aligned_cols=82 Identities=13% Similarity=0.040 Sum_probs=48.2
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCC---Ccccccch----hhhc-
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD---PHFKRCKY----KWRI- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d---~~f~~~h~----~~~~- 81 (169)
++.+||-+|+|. | +|+.. ++ +|+++|.|+.-++.+++- ..|.+ +.+.+ .+.+.... .-++
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~l---Ga~~v-i~~~~~~~~~~~~v~~~~~~g~D~v 264 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEF---GATEC-INPQDFSKPIQEVLIEMTDGGVDYS 264 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHH---TCSEE-ECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHc---CCceE-eccccccccHHHHHHHHhCCCCCEE
Confidence 467899999753 2 44443 45 899999999888877642 12222 11211 11000000 0000
Q ss_pred ---c-cHHHHHHHHHhccCC-cEEEEE
Q psy13086 82 ---I-NQNLLSEYAYVLSEG-GIVYTI 103 (169)
Q Consensus 82 ---~-~~~~l~~~~rvLkpG-G~l~i~ 103 (169)
+ ....++...+.|+++ |++++.
T Consensus 265 id~~g~~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 265 FECIGNVKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp EECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred EECCCcHHHHHHHHHhhccCCcEEEEE
Confidence 1 256889999999999 999875
No 339
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=77.37 E-value=5.1 Score=32.33 Aligned_cols=84 Identities=8% Similarity=-0.059 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cc-h----hhhc--
Q psy13086 16 EKKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CK-Y----KWRI-- 81 (169)
Q Consensus 16 ~~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h-~----~~~~-- 81 (169)
.++.+||=+|+|. | +++. -+++|+++|.++.-++.+++- ..|.+. ...++.+.. .. . .-++
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~-~Ga~Vi~~~~~~~~~~~~~~l---Ga~~vi-~~~~~~~~~~v~~~~~g~g~D~vi 262 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKA-TGAEVIVTSSSREKLDRAFAL---GADHGI-NRLEEDWVERVYALTGDRGADHIL 262 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHH---TCSEEE-ETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-cCCEEEEEecCchhHHHHHHc---CCCEEE-cCCcccHHHHHHHHhCCCCceEEE
Confidence 3468899999764 3 4444 357999999999888877652 112221 111111000 00 0 0000
Q ss_pred --ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 --INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 --~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.....++...+.|+|||++++..
T Consensus 263 d~~g~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 263 EIAGGAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EETTSSCHHHHHHHEEEEEEEEEEC
T ss_pred ECCChHHHHHHHHHhhcCCEEEEEe
Confidence 01245777889999999998863
No 340
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=77.05 E-value=5.1 Score=32.36 Aligned_cols=82 Identities=10% Similarity=-0.063 Sum_probs=48.4
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCC--Cccc-ccch----hhhc-
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD--PHFK-RCKY----KWRI- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d--~~f~-~~h~----~~~~- 81 (169)
++.+||=+|+|. | +|+.. ++ +|+++|.|+.-++.|++- ..|.+ +.+.+ ..+. .... .-++
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l---Ga~~v-i~~~~~~~~~~~~i~~~t~gg~Dvv 265 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAIEL---GATEC-LNPKDYDKPIYEVICEKTNGGVDYA 265 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHT---TCSEE-ECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHHHc---CCcEE-EecccccchHHHHHHHHhCCCCCEE
Confidence 467899999853 3 44444 44 899999999888877642 12222 11211 1010 0000 0000
Q ss_pred ---c-cHHHHHHHHHhccCC-cEEEEE
Q psy13086 82 ---I-NQNLLSEYAYVLSEG-GIVYTI 103 (169)
Q Consensus 82 ---~-~~~~l~~~~rvLkpG-G~l~i~ 103 (169)
+ ....++...+.|++| |++++.
T Consensus 266 id~~g~~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 266 VECAGRIETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp EECSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred EECCCCHHHHHHHHHHHhcCCCEEEEE
Confidence 1 257889999999999 999875
No 341
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=76.81 E-value=6.6 Score=31.72 Aligned_cols=82 Identities=9% Similarity=-0.068 Sum_probs=48.4
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCC--Ccc-cccc-h---hhhc-
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD--PHF-KRCK-Y---KWRI- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d--~~f-~~~h-~---~~~~- 81 (169)
++.+||=+|+|. | +|+.. ++ +|+++|.++.-++.|++- ..|.+ +.+.+ ..+ +... . .-++
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l---Ga~~v-i~~~~~~~~~~~~v~~~~~~g~Dvv 269 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKAL---GATDC-LNPRELDKPVQDVITELTAGGVDYS 269 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHT---TCSEE-ECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh---CCcEE-EccccccchHHHHHHHHhCCCccEE
Confidence 467899999753 3 55554 45 899999999888777642 12222 11211 101 0000 0 0000
Q ss_pred ---c-cHHHHHHHHHhccCC-cEEEEE
Q psy13086 82 ---I-NQNLLSEYAYVLSEG-GIVYTI 103 (169)
Q Consensus 82 ---~-~~~~l~~~~rvLkpG-G~l~i~ 103 (169)
+ ....++...+.|++| |++++.
T Consensus 270 id~~G~~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 270 LDCAGTAQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp EESSCCHHHHHHHHHTBCTTTCEEEEC
T ss_pred EECCCCHHHHHHHHHHhhcCCCEEEEE
Confidence 1 257889999999999 999875
No 342
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=76.57 E-value=3.3 Score=33.53 Aligned_cols=83 Identities=11% Similarity=0.025 Sum_probs=49.2
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccccch----hhhc----
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRCKY----KWRI---- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~h~----~~~~---- 81 (169)
++.+||=+|...| +|+....++|+++|.++.-++.+++- ..|.+ +.+.++..+.... .-.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l---Gad~v-i~~~~~~~~~v~~~~~~g~Dvvid~ 246 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL---GAHHV-IDHSKPLAAEVAALGLGAPAFVFST 246 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT---TCSEE-ECTTSCHHHHHHTTCSCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc---CCCEE-EeCCCCHHHHHHHhcCCCceEEEEC
Confidence 3578999984334 55544567999999999888877652 12222 1222211100000 0000
Q ss_pred c-cHHHHHHHHHhccCCcEEEEE
Q psy13086 82 I-NQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ~-~~~~l~~~~rvLkpGG~l~i~ 103 (169)
+ .+..++.+.+.|++||++++.
T Consensus 247 ~g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 247 THTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp SCHHHHHHHHHHHSCTTCEEEEC
T ss_pred CCchhhHHHHHHHhcCCCEEEEE
Confidence 1 245889999999999999875
No 343
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=76.50 E-value=1.7 Score=36.39 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=28.1
Q ss_pred CCeEEEEcCccc-cc-------CcCC----CCcEEEEeCCHHHHHHHHHHh
Q psy13086 18 KVEFVDVGCGKL-YL-------PMFP----STLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 18 ~~~iLDiGCG~G-la-------~~~p----~~~v~GiDis~~~l~~a~~~~ 56 (169)
.-.|+|+|.|+| |+ +..| ..++.-||+|+.+.+.-++++
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 457999999999 11 1223 358999999998887655544
No 344
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=75.68 E-value=10 Score=30.98 Aligned_cols=39 Identities=13% Similarity=-0.000 Sum_probs=28.0
Q ss_pred CCCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHH
Q psy13086 16 EKKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 16 ~~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~ 54 (169)
.++.+||=+|+|. | +|+...-..|+++|.++.-++.|++
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 3467888899852 2 5555433389999999988888765
No 345
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=73.63 E-value=13 Score=29.47 Aligned_cols=51 Identities=10% Similarity=0.135 Sum_probs=33.8
Q ss_pred CeEEEEcCcc-c------ccCcCCCCcEEE-EeCCHHHHHHHHHHhc--------------cccceEEEeCCC
Q psy13086 19 VEFVDVGCGK-L------YLPMFPSTLILG-LEIRVKVSDYVIDEWS--------------LYLKKMFFLYPD 69 (169)
Q Consensus 19 ~~iLDiGCG~-G------la~~~p~~~v~G-iDis~~~l~~a~~~~~--------------~~~d~v~~~f~d 69 (169)
-+|-=||||. | ..+..|+.+++| +|.+++..+.+.++.. ..+|.|.+.-|+
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~ 96 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPT 96 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCG
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCC
Confidence 4788899996 4 123457888887 5999876665544322 457888776554
No 346
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=72.52 E-value=3.7 Score=29.34 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=27.0
Q ss_pred cccceEEEeCCCCcccccchhhhcccHHHHHHHHHhccCCcEEEE
Q psy13086 58 LYLKKMFFLYPDPHFKRCKYKWRIINQNLLSEYAYVLSEGGIVYT 102 (169)
Q Consensus 58 ~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i 102 (169)
..+|.|.+.-+... + .+.+...++..+++.|||||+|.-
T Consensus 58 stYD~V~~lt~~~~-~-----~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 58 AKYETVHYLTPEAQ-T-----DIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SSCCSEEEECCCSS-C-----SCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccccEEEEecCCcc-c-----hhhcCHHHHHHHHHHhCCCCEEEe
Confidence 56666665444331 1 122457899999999999999986
No 347
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=72.48 E-value=2.3 Score=34.40 Aligned_cols=24 Identities=25% Similarity=0.310 Sum_probs=20.5
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCh
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITDVK 107 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d~~ 107 (169)
...+.++.++|+|||.+++..+..
T Consensus 86 ~~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 86 KRWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECSC
T ss_pred HHHHHHHHHHcCCCeEEEEEcCcc
Confidence 578889999999999999987643
No 348
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=72.25 E-value=4 Score=32.41 Aligned_cols=83 Identities=7% Similarity=0.028 Sum_probs=48.1
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc----------chh
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC----------KYK 78 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~----------h~~ 78 (169)
.++.+||=+|++.| +++. -+++|+++|.++.-++.+++- . .+.+ +.+.++.+... ...
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~-~Ga~Vi~~~~~~~~~~~~~~~-g--a~~~-~~~~~~~~~~~~~~~~~~~g~D~v 221 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKM-KGAHTIAVASTDEKLKIAKEY-G--AEYL-INASKEDILRQVLKFTNGKGVDAS 221 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHT-T--CSEE-EETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHc-C--CcEE-EeCCCchHHHHHHHHhCCCCceEE
Confidence 34689999997555 4443 357999999999888877652 1 1211 11211111000 000
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
-.......++...+.|++||++++.
T Consensus 222 id~~g~~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 222 FDSVGKDTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EECCGGGGHHHHHHHEEEEEEEEEC
T ss_pred EECCChHHHHHHHHHhccCCEEEEE
Confidence 0001124678888999999999875
No 349
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=71.91 E-value=2.9 Score=34.05 Aligned_cols=39 Identities=26% Similarity=0.468 Sum_probs=28.5
Q ss_pred CCeEEEEcCccc-----ccCcCCCCcEEEEeCCHHHHHHHHHHhc
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPSTLILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~~~v~GiDis~~~l~~a~~~~~ 57 (169)
...|+.+|||.. +...+++..++-||. +.+++.-++.++
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~ 141 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILR 141 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHH
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhh
Confidence 578999999999 444446778888887 777776555443
No 350
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=71.82 E-value=6.7 Score=31.56 Aligned_cols=82 Identities=18% Similarity=0.100 Sum_probs=47.7
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cc------hhhhc-
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CK------YKWRI- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h------~~~~~- 81 (169)
++.+||-.|++.| ++.. .+++|+++|.+++-++.+++. . .+.+ +.+.++.+.. .. ...-+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~-~Ga~Vi~~~~~~~~~~~~~~~-g--a~~~-~d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARA-YGLKILGTAGTEEGQKIVLQN-G--AHEV-FNHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHT-T--CSEE-EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHc-C--CCEE-EeCCCchHHHHHHHHcCCCCcEEEE
Confidence 4688999998555 3333 357999999999877766542 1 1211 2222221100 00 00000
Q ss_pred --ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 --INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 --~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.-...+....+.|++||++++.
T Consensus 245 ~~~G~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 245 EMLANVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp ESCHHHHHHHHHHHEEEEEEEEEC
T ss_pred ECCChHHHHHHHHhccCCCEEEEE
Confidence 1134678888999999999875
No 351
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=71.75 E-value=6.3 Score=31.41 Aligned_cols=83 Identities=6% Similarity=0.034 Sum_probs=48.0
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cc-h----hhhc-
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CK-Y----KWRI- 81 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h-~----~~~~- 81 (169)
.++.+||-+|++.| +++. -+++|+++|.++.-++.+++ +. .+.+ +.+.++.+.. .. . .-++
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~-~G~~Vi~~~~~~~~~~~~~~-~g--a~~~-~d~~~~~~~~~~~~~~~~~~~d~v 239 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKL-FGARVIATAGSEDKLRRAKA-LG--ADET-VNYTHPDWPKEVRRLTGGKGADKV 239 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH-HT--CSEE-EETTSTTHHHHHHHHTTTTCEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHh-cC--CCEE-EcCCcccHHHHHHHHhCCCCceEE
Confidence 34688999999544 3333 35699999999988887754 21 2221 2222221100 00 0 0000
Q ss_pred ---ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 ---INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ---~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.....++...+.|+++|++++.
T Consensus 240 i~~~g~~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 240 VDHTGALYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp EESSCSSSHHHHHHHEEEEEEEEES
T ss_pred EECCCHHHHHHHHHhhccCCEEEEE
Confidence 0124678888999999998875
No 352
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=70.41 E-value=9.5 Score=30.47 Aligned_cols=81 Identities=9% Similarity=0.016 Sum_probs=48.4
Q ss_pred CeEEEEcCccc-------ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc-c-----hhhhc---
Q psy13086 19 VEFVDVGCGKL-------YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC-K-----YKWRI--- 81 (169)
Q Consensus 19 ~~iLDiGCG~G-------la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~-h-----~~~~~--- 81 (169)
.+||=.|++.| ++.. .++ +|+++|.++.-++.+++.+. .+.+ +.+.++.+... . ...-+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~-~Ga~~Vi~~~~~~~~~~~~~~~~g--~~~~-~d~~~~~~~~~~~~~~~~~~d~vi~~ 237 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHF-LGCSRVVGICGTHEKCILLTSELG--FDAA-INYKKDNVAEQLRESCPAGVDVYFDN 237 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHHTSC--CSEE-EETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred cEEEEECCCcHHHHHHHHHHHH-CCCCeEEEEeCCHHHHHHHHHHcC--CceE-EecCchHHHHHHHHhcCCCCCEEEEC
Confidence 78999999666 3333 356 99999999887777765332 1211 22222211100 0 00000
Q ss_pred ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.-...++...+.|++||++++.
T Consensus 238 ~G~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 238 VGGNISDTVISQMNENSHIILC 259 (357)
T ss_dssp CCHHHHHHHHHTEEEEEEEEEC
T ss_pred CCHHHHHHHHHHhccCcEEEEE
Confidence 1246788899999999999875
No 353
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=69.66 E-value=14 Score=30.16 Aligned_cols=82 Identities=5% Similarity=-0.112 Sum_probs=46.2
Q ss_pred CCeEEEEcCccc-ccCcCCCCcEEEEeCCHHHHHHHHHHhc-------------------cccceEEEeCCCCcccccch
Q psy13086 18 KVEFVDVGCGKL-YLPMFPSTLILGLEIRVKVSDYVIDEWS-------------------LYLKKMFFLYPDPHFKRCKY 77 (169)
Q Consensus 18 ~~~iLDiGCG~G-la~~~p~~~v~GiDis~~~l~~a~~~~~-------------------~~~d~v~~~f~d~~f~~~h~ 77 (169)
...||.|+.+.| ++.......++.+.=|--.-...+.|+. ..+|.+.+..|..
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~lpk~------- 111 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGVVLIKVPKT------- 111 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGCCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTSCCCSSCSEEEEECCSC-------
T ss_pred CCCEEEECCCCCHHHHhhccCCceEEEhHHHHHHHHHHHHHHcCCCccceEecccccccccCCCEEEEEcCCC-------
Confidence 457999999999 3322212244555335433333344443 2333333333311
Q ss_pred hhhcccHHHHHHHHHhccCCcEEEEEeCChH
Q psy13086 78 KWRIINQNLLSEYAYVLSEGGIVYTITDVKD 108 (169)
Q Consensus 78 ~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~ 108 (169)
+.. ....|+.+...|+||+.+++..+...
T Consensus 112 ~~~--l~~~L~~l~~~l~~~~~i~~~g~~~~ 140 (375)
T 4dcm_A 112 LAL--LEQQLRALRKVVTSDTRIIAGAKARD 140 (375)
T ss_dssp HHH--HHHHHHHHHTTCCTTSEEEEEEEGGG
T ss_pred HHH--HHHHHHHHHhhCCCCCEEEEEecccc
Confidence 111 25688999999999999988765543
No 354
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=69.65 E-value=20 Score=30.39 Aligned_cols=101 Identities=12% Similarity=-0.006 Sum_probs=58.9
Q ss_pred CeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHH--------------------Hhc---------cccce
Q psy13086 19 VEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVID--------------------EWS---------LYLKK 62 (169)
Q Consensus 19 ~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~--------------------~~~---------~~~d~ 62 (169)
.+|.=||+|.= ++...++.+|+++|+++.-++..++ ++. ...|.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 57889999964 4444446789999999987765542 111 23566
Q ss_pred EEEeCCCCcccc---cchhhhc-ccHHHHHHHHHhccCCcEEEEEe-CChHHHHHHHHHHhc
Q psy13086 63 MFFLYPDPHFKR---CKYKWRI-INQNLLSEYAYVLSEGGIVYTIT-DVKDLHDWIVSHFTE 119 (169)
Q Consensus 63 v~~~f~d~~f~~---~h~~~~~-~~~~~l~~~~rvLkpGG~l~i~~-d~~~~~~~~~~~~~~ 119 (169)
+.+..|.|.-.. ......+ ...++++.+...|++|-.++..+ -.+...+.+...+.+
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 777666653100 0000000 02467888889999987776543 333344445555544
No 355
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=68.96 E-value=2.7 Score=35.72 Aligned_cols=38 Identities=5% Similarity=-0.004 Sum_probs=26.6
Q ss_pred CCeEEEEcCccc---------ccCcCC-CCcEEEEeCCHHHHHHHHHH
Q psy13086 18 KVEFVDVGCGKL---------YLPMFP-STLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 18 ~~~iLDiGCG~G---------la~~~p-~~~v~GiDis~~~l~~a~~~ 55 (169)
...|+|+|.|+| +....+ ..++.-||+|+.+.+.-+++
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~ 185 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRET 185 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHH
Confidence 367999999999 111111 24899999999877655544
No 356
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=68.93 E-value=3.8 Score=32.72 Aligned_cols=80 Identities=10% Similarity=0.033 Sum_probs=46.7
Q ss_pred CCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cch----hhhc----
Q psy13086 18 KVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CKY----KWRI---- 81 (169)
Q Consensus 18 ~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h~----~~~~---- 81 (169)
+.+||-+|+|. | +|+.. ++ +|+++|.++.-++.+++- .+.+ +.+.++.+.. ... .-++
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l----a~~v-~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY----ADRL-VNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT----CSEE-ECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh----HHhc-cCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 67899999942 2 44443 55 899999998766655431 1221 2222221110 000 0000
Q ss_pred c-cHHHHHHHHHhccCCcEEEEE
Q psy13086 82 I-NQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ~-~~~~l~~~~rvLkpGG~l~i~ 103 (169)
+ ....++...+.|+++|++++.
T Consensus 239 ~g~~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 239 SGNEAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp SCCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHhcCCEEEEE
Confidence 0 246889999999999998875
No 357
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=68.69 E-value=12 Score=29.83 Aligned_cols=82 Identities=9% Similarity=0.040 Sum_probs=48.9
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cch---hhhc-----
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CKY---KWRI----- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h~---~~~~----- 81 (169)
++.+||-+|+|. | +++.. +++|+++|.++.-++.+++ +. .+.+ +.+.++.+.. ... .-++
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~-lG--a~~~-~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE-LG--ADLV-VNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH-TT--CSEE-ECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH-CC--CCEE-ecCCCccHHHHHHHHhCCCCEEEECC
Confidence 367899999952 3 44443 5699999999988887764 21 2222 2222211100 000 0000
Q ss_pred ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
-....++...+.|++||++++.
T Consensus 239 g~~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 239 VSKPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp CCHHHHHHHHHHEEEEEEEEEC
T ss_pred CCHHHHHHHHHHhhcCCEEEEe
Confidence 1246889999999999999875
No 358
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=68.48 E-value=28 Score=27.80 Aligned_cols=85 Identities=15% Similarity=0.102 Sum_probs=50.5
Q ss_pred CeEEEEcCccc-ccCc--CC-CCcEEEEeCCHHHHHHHHHHhc-------cccceEEEeCCCCcccc-------------
Q psy13086 19 VEFVDVGCGKL-YLPM--FP-STLILGLEIRVKVSDYVIDEWS-------LYLKKMFFLYPDPHFKR------------- 74 (169)
Q Consensus 19 ~~iLDiGCG~G-la~~--~p-~~~v~GiDis~~~l~~a~~~~~-------~~~d~v~~~f~d~~f~~------------- 74 (169)
..||+||||-= .+.+ +| +..++=|| .+.+++..++.+. .....|...+.+.|.+.
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~ 182 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSARTA 182 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCEE
Confidence 56999999987 3322 24 37899999 5888888776653 11112222222222221
Q ss_pred ------cchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 75 ------CKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 75 ------~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.++...-....+++.+...+.||+.+.+..
T Consensus 183 ~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 183 WLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred EEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 111111012568888988889999998864
No 359
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=68.42 E-value=2.6 Score=34.86 Aligned_cols=39 Identities=10% Similarity=0.057 Sum_probs=28.3
Q ss_pred CeEEEEcCccc-c--cCcCCCC-cEEEEeCCHHHHHHHHHHhc
Q psy13086 19 VEFVDVGCGKL-Y--LPMFPST-LILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 19 ~~iLDiGCG~G-l--a~~~p~~-~v~GiDis~~~l~~a~~~~~ 57 (169)
-++||+-||.| + .-...+. .+.++|+++.+++..+.|.+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~ 45 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP 45 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC
Confidence 47999999999 2 2222234 46799999999988877643
No 360
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=68.37 E-value=7.8 Score=29.85 Aligned_cols=23 Identities=13% Similarity=0.251 Sum_probs=19.5
Q ss_pred cHHHHHHHHHhccCCcEEEEEeC
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d 105 (169)
....++++.++|+|||.+++..+
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~~~ 75 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIFNT 75 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhcCCeEEEEEcC
Confidence 35788999999999999998753
No 361
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=68.19 E-value=6.4 Score=31.63 Aligned_cols=84 Identities=12% Similarity=-0.074 Sum_probs=47.2
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cc------hhhhc
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CK------YKWRI 81 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h------~~~~~ 81 (169)
.++.+||-+|++.| ++.. .+++|+++|.+++-++.+++ +. .+.+ +.+.++.+.. .. ...-+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~-~Ga~Vi~~~~~~~~~~~~~~-~g--~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 235 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRM-AGAIPLVTAGSQKKLQMAEK-LG--AAAG-FNYKKEDFSEATLKFTKGAGVNLI 235 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHH-HT--CSEE-EETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHH-cC--CcEE-EecCChHHHHHHHHHhcCCCceEE
Confidence 34688999996555 3333 35799999999988877743 21 1111 1222211100 00 00000
Q ss_pred ---ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 ---INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 ---~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.-...++...+.|++||++++..
T Consensus 236 i~~~G~~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 236 LDCIGGSYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EESSCGGGHHHHHHHEEEEEEEEECC
T ss_pred EECCCchHHHHHHHhccCCCEEEEEe
Confidence 01235777889999999998753
No 362
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=67.63 E-value=11 Score=30.66 Aligned_cols=83 Identities=10% Similarity=-0.040 Sum_probs=47.5
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCC---CCcccc-cc-h----hhhc
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYP---DPHFKR-CK-Y----KWRI 81 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~---d~~f~~-~h-~----~~~~ 81 (169)
++.+||-+|+|. | +|+.....+|+++|.|++-++.+++- ..|.+ +.+. +..+.. .. . .-++
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l---Ga~~v-i~~~~~~~~~~~~~v~~~~~g~g~Dv 270 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI---GADLT-LNRRETSVEERRKAIMDITHGRGADF 270 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT---TCSEE-EETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc---CCcEE-EeccccCcchHHHHHHHHhCCCCCcE
Confidence 468899999653 2 55554325999999999888877642 12222 1111 100000 00 0 0000
Q ss_pred ----c-cHHHHHHHHHhccCCcEEEEE
Q psy13086 82 ----I-NQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ----~-~~~~l~~~~rvLkpGG~l~i~ 103 (169)
+ ....++...+.|++||++++.
T Consensus 271 vid~~g~~~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 271 ILEATGDSRALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp EEECSSCTTHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEE
Confidence 0 135788889999999999875
No 363
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=67.22 E-value=13 Score=29.91 Aligned_cols=83 Identities=8% Similarity=0.042 Sum_probs=48.2
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc-ch----hhhc---
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC-KY----KWRI--- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~-h~----~~~~--- 81 (169)
++.+||=+|++.| +++.. +++|+++|.+++-++.+++ +. .+.+ +.+.+..+... .. .-++
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~-~G--a~~~-~~~~~~~~~~~~~~~~~~g~D~vid 237 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS-LG--CDRP-INYKTEPVGTVLKQEYPEGVDVVYE 237 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH-TT--CSEE-EETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH-cC--CcEE-EecCChhHHHHHHHhcCCCCCEEEE
Confidence 4688999995444 44443 5699999999887777765 21 2221 12222111100 00 0000
Q ss_pred -ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 -INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 -~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.....++...+.|+++|++++..
T Consensus 238 ~~g~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 238 SVGGAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp CSCTHHHHHHHHHEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEe
Confidence 11357888999999999998763
No 364
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=67.02 E-value=2.8 Score=33.17 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=19.0
Q ss_pred HHHHHHHHHhccCCcEEEEEeC
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d 105 (169)
..+++++.|+|||||.+++..+
T Consensus 77 ~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 77 DRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEEC
Confidence 4578899999999999998754
No 365
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=66.50 E-value=10 Score=30.02 Aligned_cols=83 Identities=8% Similarity=0.056 Sum_probs=47.0
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cc-h----hhhc--
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CK-Y----KWRI-- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h-~----~~~~-- 81 (169)
++.+||-.|++.| ++.. .+++|+++|.+++-++.+++. . .+.+ +.+.+..+.. .. . .-++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~-~G~~Vi~~~~~~~~~~~~~~~-g--~~~~-~d~~~~~~~~~i~~~~~~~~~d~vi 219 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARH-LGATVIGTVSTEEKAETARKL-G--CHHT-INYSTQDFAEVVREITGGKGVDVVY 219 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHH-T--CSEE-EETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHc-C--CCEE-EECCCHHHHHHHHHHhCCCCCeEEE
Confidence 4688999997555 3333 357999999999777777542 1 1111 1222111100 00 0 0000
Q ss_pred --ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 --INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 --~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.-...++...+.|++||++++..
T Consensus 220 ~~~g~~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 220 DSIGKDTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp ECSCTTTHHHHHHTEEEEEEEEECC
T ss_pred ECCcHHHHHHHHHhhccCCEEEEEe
Confidence 01246788889999999998753
No 366
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=66.15 E-value=3.3 Score=33.96 Aligned_cols=37 Identities=8% Similarity=-0.000 Sum_probs=28.4
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCC-cEEEEeCCHHHHHHHHH
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPST-LILGLEIRVKVSDYVID 54 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~-~v~GiDis~~~l~~a~~ 54 (169)
++.+||-+|||. | +|+.. ++ +|+++|.|+..++.|++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHH
Confidence 468999999865 5 44444 45 89999999988888764
No 367
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=65.72 E-value=5.5 Score=31.54 Aligned_cols=83 Identities=7% Similarity=0.001 Sum_probs=47.6
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc--ch----hhhc-
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC--KY----KWRI- 81 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~--h~----~~~~- 81 (169)
.++.+||=+|+..| +++. -+++|+++|.++.-++.+++.- .+.+ +.+.+..+... .. .-++
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~-~Ga~Vi~~~~~~~~~~~~~~~G---a~~~-~~~~~~~~~~~~~~~~~~~g~Dvv 213 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKA-LGAKLIGTVSSPEKAAHAKALG---AWET-IDYSHEDVAKRVLELTDGKKCPVV 213 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-HTCEEEEEESSHHHHHHHHHHT---CSEE-EETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHcC---CCEE-EeCCCccHHHHHHHHhCCCCceEE
Confidence 34688999995444 3333 3579999999998888776421 1111 12221111000 00 0000
Q ss_pred ---ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 ---INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ---~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.....+....+.|++||++++.
T Consensus 214 id~~g~~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 214 YDGVGQDTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp EESSCGGGHHHHHTTEEEEEEEEEC
T ss_pred EECCChHHHHHHHHHhcCCCEEEEE
Confidence 1124677888999999999886
No 368
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=64.33 E-value=3.5 Score=33.15 Aligned_cols=24 Identities=8% Similarity=-0.159 Sum_probs=20.5
Q ss_pred cHHHHHHHHHhccCCcEEEEEeCC
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
....+++++|+|||||.+++..+.
T Consensus 63 l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 63 FLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHCcCCcEEEEEECC
Confidence 367899999999999999997654
No 369
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=64.33 E-value=8.3 Score=30.92 Aligned_cols=83 Identities=11% Similarity=0.002 Sum_probs=47.2
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccccch-----hhhc--
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRCKY-----KWRI-- 81 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~h~-----~~~~-- 81 (169)
.++.+||=+|.+.| +++. -+++|+++|.++.-++.+++- . .+.+ +.+.++.+...-. .-++
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~-~Ga~Vi~~~~~~~~~~~~~~l-G--a~~~-~~~~~~~~~~~~~~~~~~g~Dvvi 240 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARA-FGAEVYATAGSTGKCEACERL-G--AKRG-INYRSEDFAAVIKAETGQGVDIIL 240 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHH-T--CSEE-EETTTSCHHHHHHHHHSSCEEEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHhc-C--CCEE-EeCCchHHHHHHHHHhCCCceEEE
Confidence 34688999965444 4443 367999999999888877652 1 1211 1222211100000 0000
Q ss_pred --ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 --INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 --~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.....++...+.|++||++++.
T Consensus 241 d~~g~~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 241 DMIGAAYFERNIASLAKDGCLSII 264 (353)
T ss_dssp ESCCGGGHHHHHHTEEEEEEEEEC
T ss_pred ECCCHHHHHHHHHHhccCCEEEEE
Confidence 1123677888999999999875
No 370
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=63.78 E-value=6.9 Score=30.87 Aligned_cols=82 Identities=7% Similarity=0.101 Sum_probs=47.0
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cc------hhhhc-
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CK------YKWRI- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h------~~~~~- 81 (169)
++.+||-+|++.| ++.. .+++|+++|.+++-++.+++. . .+.+ +.+.++.+.. .. ...-+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~-~G~~V~~~~~~~~~~~~~~~~-g--~~~~-~~~~~~~~~~~~~~~~~~~~~D~vi 214 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKA-LGAKLIGTVGTAQKAQSALKA-G--AWQV-INYREEDLVERLKEITGGKKVRVVY 214 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH-HTCEEEEEESSHHHHHHHHHH-T--CSEE-EETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHc-C--CCEE-EECCCccHHHHHHHHhCCCCceEEE
Confidence 4688999996555 3333 256999999998877777642 1 1111 1222211100 00 00000
Q ss_pred --ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 --INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 --~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.-...++...+.|++||++++.
T Consensus 215 ~~~g~~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 215 DSVGRDTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp ECSCGGGHHHHHHTEEEEEEEEEC
T ss_pred ECCchHHHHHHHHHhcCCCEEEEE
Confidence 0135688889999999999875
No 371
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=62.28 E-value=5.9 Score=32.14 Aligned_cols=38 Identities=5% Similarity=0.053 Sum_probs=27.9
Q ss_pred CeEEEEcCccc---ccCcCCC---CcEEEEeCCHHHHHHHHHHh
Q psy13086 19 VEFVDVGCGKL---YLPMFPS---TLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 19 ~~iLDiGCG~G---la~~~p~---~~v~GiDis~~~l~~a~~~~ 56 (169)
-+++|+-||.| ++-...+ ..+.++|+++.+++.-+.|.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~ 47 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF 47 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC
Confidence 57999999999 2222112 35789999999988877764
No 372
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=61.81 E-value=9.8 Score=30.34 Aligned_cols=83 Identities=8% Similarity=0.048 Sum_probs=46.8
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc---------chhh
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC---------KYKW 79 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~---------h~~~ 79 (169)
.++.+||=+|++.| +++. -+++|++++.++.-++.+++- ..+.+. .+.+...+.. ...-
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~-~Ga~Vi~~~~~~~~~~~~~~~---ga~~v~-~~~~~~~~~v~~~~~~~g~Dvvi 232 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKG-MGAKVIAVVNRTAATEFVKSV---GADIVL-PLEEGWAKAVREATGGAGVDMVV 232 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH-TTCEEEEEESSGGGHHHHHHH---TCSEEE-ESSTTHHHHHHHHTTTSCEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHhc---CCcEEe-cCchhHHHHHHHHhCCCCceEEE
Confidence 34788999998555 4444 357999999998877777652 112111 1111100000 0000
Q ss_pred hcccHHHHHHHHHhccCCcEEEEE
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
.......++...+.|++||++++.
T Consensus 233 d~~g~~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 233 DPIGGPAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp ESCC--CHHHHHHTEEEEEEEEEC
T ss_pred ECCchhHHHHHHHhhcCCCEEEEE
Confidence 001134678888999999999875
No 373
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=60.91 E-value=28 Score=27.67 Aligned_cols=22 Identities=23% Similarity=0.375 Sum_probs=19.9
Q ss_pred HHHHHHHHHhccCCcEEEEEeC
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITD 105 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d 105 (169)
+.+|.....+|+|||++.+.|-
T Consensus 225 ~~~l~~~~~~l~~ggr~~visf 246 (301)
T 1m6y_A 225 KEFLKKAEDLLNPGGRIVVISF 246 (301)
T ss_dssp HHHHHHGGGGEEEEEEEEEEES
T ss_pred HHHHHHHHHhhCCCCEEEEEec
Confidence 6789999999999999999884
No 374
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=60.72 E-value=35 Score=28.73 Aligned_cols=95 Identities=8% Similarity=0.124 Sum_probs=57.5
Q ss_pred CeEEEEcCccc---ccCcC-CCCcEEEEeCCHHHHHHHHHH-------------------hc---------cccceEEEe
Q psy13086 19 VEFVDVGCGKL---YLPMF-PSTLILGLEIRVKVSDYVIDE-------------------WS---------LYLKKMFFL 66 (169)
Q Consensus 19 ~~iLDiGCG~G---la~~~-p~~~v~GiDis~~~l~~a~~~-------------------~~---------~~~d~v~~~ 66 (169)
.+|-=||+|.= +|..+ .+.+|+++|+++..++.+++. +. ...|.+.+.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvViia 116 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVIIA 116 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEEEEe
Confidence 46777888753 22211 157999999999887766541 21 345666666
Q ss_pred CCCCc------ccccchhhhcccHHHHHHHHHhccCCcEEEEEeC-ChHHHHHHHHHHhcC
Q psy13086 67 YPDPH------FKRCKYKWRIINQNLLSEYAYVLSEGGIVYTITD-VKDLHDWIVSHFTEH 120 (169)
Q Consensus 67 f~d~~------f~~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d-~~~~~~~~~~~~~~~ 120 (169)
.|.+. ++... ...+++.+.. |+||-.++..+- .+...+.+.+.+.+.
T Consensus 117 VPt~~~~~~~~~Dl~~------V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~ 170 (432)
T 3pid_A 117 TPTDYDPKTNYFNTST------VEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID 170 (432)
T ss_dssp CCCEEETTTTEEECHH------HHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC
T ss_pred CCCccccccccccHHH------HHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc
Confidence 55542 11111 2457788888 999988877653 345566666666543
No 375
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=56.70 E-value=16 Score=29.06 Aligned_cols=39 Identities=5% Similarity=-0.107 Sum_probs=27.9
Q ss_pred CCeEEEEcCccc---ccCcCCCCc---EEEEeCCHHHHHHHHHHh
Q psy13086 18 KVEFVDVGCGKL---YLPMFPSTL---ILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 18 ~~~iLDiGCG~G---la~~~p~~~---v~GiDis~~~l~~a~~~~ 56 (169)
..++||+=||.| ++-...+.. +.++|+++.+++.-+.|.
T Consensus 16 ~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~ 60 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH 60 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT
T ss_pred CCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC
Confidence 568999999999 332223333 589999999888766553
No 376
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=55.74 E-value=5.5 Score=31.92 Aligned_cols=23 Identities=30% Similarity=0.369 Sum_probs=20.4
Q ss_pred HHHHHHHHHhccCCcEEEEEeCC
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
..+|.....+|+|||++.+.|--
T Consensus 213 ~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 213 KEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHhcCCCEEEEEecC
Confidence 67999999999999999998843
No 377
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=55.51 E-value=10 Score=30.79 Aligned_cols=38 Identities=5% Similarity=-0.018 Sum_probs=28.0
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHH
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~ 54 (169)
++.+||-+|||. | +|+...-..|+++|.++.-++.|++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 467899999854 4 5555433379999999988888864
No 378
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=55.51 E-value=19 Score=28.66 Aligned_cols=82 Identities=6% Similarity=-0.020 Sum_probs=46.9
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccccch----hhhc----
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRCKY----KWRI---- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~h~----~~~~---- 81 (169)
++.+||=+|...| +++. .+++|+++|.++.-++.+++- ..|.+ +.+.+...+.... .-++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~-~Ga~Vi~~~~~~~~~~~~~~l---Ga~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~ 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA-YGLRVITTASRNETIEWTKKM---GADIV-LNHKESLLNQFKTQGIELVDYVFCT 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-TTCEEEEECCSHHHHHHHHHH---TCSEE-ECTTSCHHHHHHHHTCCCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHhc---CCcEE-EECCccHHHHHHHhCCCCccEEEEC
Confidence 4678998853334 4444 457999999999888877652 12222 1121111100000 0000
Q ss_pred -ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 -INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 -~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
-....++...+.|+++|+++..
T Consensus 225 ~g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 225 FNTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEES
T ss_pred CCchHHHHHHHHHhccCCEEEEE
Confidence 0245788999999999999654
No 379
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=54.70 E-value=43 Score=22.01 Aligned_cols=37 Identities=11% Similarity=0.165 Sum_probs=25.0
Q ss_pred CCeEEEEcCccc---ccCcC--CCCcEEEEeCCHHHHHHHHH
Q psy13086 18 KVEFVDVGCGKL---YLPMF--PSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 18 ~~~iLDiGCG~G---la~~~--p~~~v~GiDis~~~l~~a~~ 54 (169)
..+|+=+|||.= ++... .+.+|+++|.++..++.+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~ 45 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA 45 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 567888898763 33221 34689999999887766554
No 380
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=53.79 E-value=6.1 Score=32.56 Aligned_cols=23 Identities=26% Similarity=0.264 Sum_probs=20.4
Q ss_pred HHHHHHHHHhccCCcEEEEEeCC
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITDV 106 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d~ 106 (169)
..+|..+..+|+|||++.+.|--
T Consensus 254 ~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 254 EQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHhCCCCEEEEEecC
Confidence 67899999999999999998843
No 381
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=53.36 E-value=29 Score=29.18 Aligned_cols=36 Identities=14% Similarity=-0.029 Sum_probs=26.7
Q ss_pred CeEEEEcCcc-c--ccCc--CCCCcEEEEeCCHHHHHHHHH
Q psy13086 19 VEFVDVGCGK-L--YLPM--FPSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 19 ~~iLDiGCG~-G--la~~--~p~~~v~GiDis~~~l~~a~~ 54 (169)
.+|.=||+|+ | +|.. ..+..|+++|+++..++.+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~ 78 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKK 78 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 5689999997 4 3332 235689999999988877654
No 382
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=52.92 E-value=57 Score=26.98 Aligned_cols=82 Identities=10% Similarity=0.011 Sum_probs=51.6
Q ss_pred CCeEEEEcCccc---ccCcC--CCCcEEEEeCCHHHHHHHHHH-hc-----------------cccceEEEeCCCCcccc
Q psy13086 18 KVEFVDVGCGKL---YLPMF--PSTLILGLEIRVKVSDYVIDE-WS-----------------LYLKKMFFLYPDPHFKR 74 (169)
Q Consensus 18 ~~~iLDiGCG~G---la~~~--p~~~v~GiDis~~~l~~a~~~-~~-----------------~~~d~v~~~f~d~~f~~ 74 (169)
...|+=+|||.= +++.. .+..|++||.++..++.+++. +. ...+.+.+..+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~--- 80 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQ--- 80 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHH---
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChH---
Confidence 456888898764 33322 357899999999999888652 10 34455544444421
Q ss_pred cchhhhcccHHHHHHHHHhccCCcEEEEEeCChHHH
Q psy13086 75 CKYKWRIINQNLLSEYAYVLSEGGIVYTITDVKDLH 110 (169)
Q Consensus 75 ~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d~~~~~ 110 (169)
....+-...|.+.|...++.........
T Consensus 81 --------~n~~i~~~ar~~~p~~~Iiara~~~~~~ 108 (413)
T 3l9w_A 81 --------TNLQLTEMVKEHFPHLQIIARARDVDHY 108 (413)
T ss_dssp --------HHHHHHHHHHHHCTTCEEEEEESSHHHH
T ss_pred --------HHHHHHHHHHHhCCCCeEEEEECCHHHH
Confidence 1345666677888888877766544433
No 383
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=52.41 E-value=11 Score=30.09 Aligned_cols=95 Identities=9% Similarity=0.071 Sum_probs=57.2
Q ss_pred CeEEEEcCccc-ccC--cCCCCcEEEEeCCHHHHHHHHHHhc-----------------------cccceEEEeCCCCcc
Q psy13086 19 VEFVDVGCGKL-YLP--MFPSTLILGLEIRVKVSDYVIDEWS-----------------------LYLKKMFFLYPDPHF 72 (169)
Q Consensus 19 ~~iLDiGCG~G-la~--~~p~~~v~GiDis~~~l~~a~~~~~-----------------------~~~d~v~~~f~d~~f 72 (169)
..+||+=+||| ++. .-+..+++-+|.++..++..++|+. ..+| +.|-||-+
T Consensus 93 ~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fd---LVfiDPPY 169 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRG---LIFIDPSY 169 (283)
T ss_dssp SSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCE---EEEECCCC
T ss_pred CCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCcc---EEEECCCC
Confidence 45899999999 221 1145799999999999998887653 1233 33446655
Q ss_pred cccchhhhcccHHHHHHHHH--hccCCcEEEEEeCC--hHHHHHHHHHHhcCC
Q psy13086 73 KRCKYKWRIINQNLLSEYAY--VLSEGGIVYTITDV--KDLHDWIVSHFTEHP 121 (169)
Q Consensus 73 ~~~h~~~~~~~~~~l~~~~r--vLkpGG~l~i~~d~--~~~~~~~~~~~~~~~ 121 (169)
..... ..++++.+.. .+.|+|++.+--+. ......+.+.+...+
T Consensus 170 e~k~~-----~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~ 217 (283)
T 2oo3_A 170 ERKEE-----YKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREIS 217 (283)
T ss_dssp CSTTH-----HHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHC
T ss_pred CCCcH-----HHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcC
Confidence 42111 1234444443 57789999886543 223445555565443
No 384
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=51.62 E-value=42 Score=28.37 Aligned_cols=85 Identities=7% Similarity=-0.004 Sum_probs=52.3
Q ss_pred CCeEEEEcCcc-c--ccCcC--CCCcEEEEeCCHHHHHHHHHH---------------------hc---------cccce
Q psy13086 18 KVEFVDVGCGK-L--YLPMF--PSTLILGLEIRVKVSDYVIDE---------------------WS---------LYLKK 62 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~~--p~~~v~GiDis~~~l~~a~~~---------------------~~---------~~~d~ 62 (169)
..+|.=||+|. | +|..+ .+.+|+++|++++-++..++. +. ...|.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 46788899996 4 33332 246899999999877766432 11 23566
Q ss_pred EEEeCCCCcccccchhhhc-ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 63 MFFLYPDPHFKRCKYKWRI-INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 63 v~~~f~d~~f~~~h~~~~~-~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+.+..|.|.-... ...+ ...++++.+...|+||-.++..+
T Consensus 88 viiaVptp~~~~~--~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 88 QFIAVGTPPDEDG--SADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp EEECCCCCBCTTS--SBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred EEEEeCCCcccCC--CccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 6666666531110 0000 12567888889999987776544
No 385
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=51.59 E-value=33 Score=27.30 Aligned_cols=79 Identities=9% Similarity=-0.055 Sum_probs=47.0
Q ss_pred CeEEEEcCcc-c-cc------CcCCCCc-EEEEeCCHH---HHHHHHHHhccccceEEEeCCCCcccccch---hhhc--
Q psy13086 19 VEFVDVGCGK-L-YL------PMFPSTL-ILGLEIRVK---VSDYVIDEWSLYLKKMFFLYPDPHFKRCKY---KWRI-- 81 (169)
Q Consensus 19 ~~iLDiGCG~-G-la------~~~p~~~-v~GiDis~~---~l~~a~~~~~~~~d~v~~~f~d~~f~~~h~---~~~~-- 81 (169)
.+||=+|+|. | ++ +. -+++ |+++|.+++ -++.+++- ..|.+ .+.++.+..... .-++
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~-~Ga~~Vi~~~~~~~~~~~~~~~~~l---Ga~~v--~~~~~~~~~i~~~~gg~Dvvi 247 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD-KGYENLYCLGRRDRPDPTIDIIEEL---DATYV--DSRQTPVEDVPDVYEQMDFIY 247 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT-TCCCEEEEEECCCSSCHHHHHHHHT---TCEEE--ETTTSCGGGHHHHSCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHH-cCCcEEEEEeCCcccHHHHHHHHHc---CCccc--CCCccCHHHHHHhCCCCCEEE
Confidence 7899999832 2 33 43 3555 999999987 77777642 12333 333221111000 0011
Q ss_pred ---ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 ---INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ---~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
-....+++..+.|++||++++.
T Consensus 248 d~~g~~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 248 EATGFPKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp ECSCCHHHHHHHHHHEEEEEEEEEC
T ss_pred ECCCChHHHHHHHHHHhcCCEEEEE
Confidence 1245889999999999999875
No 386
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=49.80 E-value=93 Score=24.47 Aligned_cols=54 Identities=13% Similarity=0.152 Sum_probs=33.2
Q ss_pred CCCCeEEEEcCccc-------cc------CcCCCCcEEEE-eCCHHHHHHHHHHhc--------------cccceEEEeC
Q psy13086 16 EKKVEFVDVGCGKL-------YL------PMFPSTLILGL-EIRVKVSDYVIDEWS--------------LYLKKMFFLY 67 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la------~~~p~~~v~Gi-Dis~~~l~~a~~~~~--------------~~~d~v~~~f 67 (169)
+|+-+|-=||||.= +. ...|+.+++|| |.+++..+.+.++.. ..+|.|.+.-
T Consensus 23 MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Iat 102 (393)
T 4fb5_A 23 MKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTT 102 (393)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECS
T ss_pred CCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECC
Confidence 56778999999963 11 12366788875 888876665554432 4688887765
Q ss_pred CC
Q psy13086 68 PD 69 (169)
Q Consensus 68 ~d 69 (169)
|+
T Consensus 103 P~ 104 (393)
T 4fb5_A 103 PN 104 (393)
T ss_dssp CG
T ss_pred Ch
Confidence 54
No 387
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=48.88 E-value=15 Score=29.53 Aligned_cols=81 Identities=10% Similarity=0.089 Sum_probs=44.4
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCc--------ccccchhhhcc
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPH--------FKRCKYKWRII 82 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~--------f~~~h~~~~~~ 82 (169)
++.+||=+|+|. | +++.. +++|+++|.++.-++.+++++. .|.+ +.+.++. +|..- ...-
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lG--a~~v-~~~~~~~~~~~~~~~~D~vi--d~~g 260 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFG--ADSF-LVSRDQEQMQAAAGTLDGII--DTVS 260 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSC--CSEE-EETTCHHHHHHTTTCEEEEE--ECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcC--CceE-EeccCHHHHHHhhCCCCEEE--ECCC
Confidence 467888899742 2 44443 5699999999887777664432 1111 1111100 00000 0000
Q ss_pred cHHHHHHHHHhccCCcEEEEE
Q psy13086 83 NQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 83 ~~~~l~~~~rvLkpGG~l~i~ 103 (169)
....++...+.|+++|+++..
T Consensus 261 ~~~~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 261 AVHPLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp SCCCSHHHHHHEEEEEEEEEC
T ss_pred cHHHHHHHHHHHhcCCEEEEE
Confidence 112456777899999998775
No 388
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=48.68 E-value=50 Score=26.36 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=25.4
Q ss_pred CCeEEEEcCcc-c------ccCcCCCCcEEE-EeCCHHHHHHHHH
Q psy13086 18 KVEFVDVGCGK-L------YLPMFPSTLILG-LEIRVKVSDYVID 54 (169)
Q Consensus 18 ~~~iLDiGCG~-G------la~~~p~~~v~G-iDis~~~l~~a~~ 54 (169)
..+|.=||||. | ++...++.++++ +|.++.-.+.+.+
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~ 67 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALD 67 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHH
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHH
Confidence 45789999997 4 332457788875 7998876655443
No 389
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=48.64 E-value=9.6 Score=30.59 Aligned_cols=83 Identities=10% Similarity=0.049 Sum_probs=44.9
Q ss_pred CCCeEEEEcCcc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcc-cccchhhhc----c-cH
Q psy13086 17 KKVEFVDVGCGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHF-KRCKYKWRI----I-NQ 84 (169)
Q Consensus 17 ~~~~iLDiGCG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f-~~~h~~~~~----~-~~ 84 (169)
++.+||=+|+|. | +++.. +++|+++|.+++-++.+++++. .|.+ +.+.++.. ......-++ + ..
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lG--a~~v-i~~~~~~~~~~~~~g~D~vid~~g~~ 255 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLG--ADDY-VIGSDQAKMSELADSLDYVIDTVPVH 255 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSC--CSCE-EETTCHHHHHHSTTTEEEEEECCCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcC--Ccee-eccccHHHHHHhcCCCCEEEECCCCh
Confidence 467899999742 2 44443 5689999999887777763332 1111 11111000 000000000 0 12
Q ss_pred HHHHHHHHhccCCcEEEEE
Q psy13086 85 NLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 85 ~~l~~~~rvLkpGG~l~i~ 103 (169)
..++...+.|+|||++++.
T Consensus 256 ~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 256 HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp CCSHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHHhccCCEEEEe
Confidence 3567778999999999875
No 390
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=47.90 E-value=44 Score=28.35 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=26.1
Q ss_pred CeEEEEcCcc-c--ccCc--CCCCcEEEEeCCHHHHHHHHHH
Q psy13086 19 VEFVDVGCGK-L--YLPM--FPSTLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 19 ~~iLDiGCG~-G--la~~--~p~~~v~GiDis~~~l~~a~~~ 55 (169)
.+|-=||+|+ | +|.. ..+..|++.|.+++.++.++++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~ 47 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDG 47 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHH
Confidence 4567788876 3 3332 2356899999999988887653
No 391
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=47.50 E-value=25 Score=29.75 Aligned_cols=86 Identities=9% Similarity=0.063 Sum_probs=49.7
Q ss_pred CCCeEEEEcCccc---ccCcC--CCCcEEEEeCCHHHHHHHHH----------------H-----hc---------cccc
Q psy13086 17 KKVEFVDVGCGKL---YLPMF--PSTLILGLEIRVKVSDYVID----------------E-----WS---------LYLK 61 (169)
Q Consensus 17 ~~~~iLDiGCG~G---la~~~--p~~~v~GiDis~~~l~~a~~----------------~-----~~---------~~~d 61 (169)
+..+|-=||+|.= +|..+ .+.+|+|+|+++.-++..++ . +. ...|
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad 99 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATD 99 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCC
Confidence 3467888888863 33322 25699999999987665432 1 11 2346
Q ss_pred eEEEeCCCCcccccchhhhc-ccHHHHHHHHHhccCC--c-EEEEEe
Q psy13086 62 KMFFLYPDPHFKRCKYKWRI-INQNLLSEYAYVLSEG--G-IVYTIT 104 (169)
Q Consensus 62 ~v~~~f~d~~f~~~h~~~~~-~~~~~l~~~~rvLkpG--G-~l~i~~ 104 (169)
.+++..|.|.-... ...+ ......+.+.+.|+++ | .+++.+
T Consensus 100 ~~~I~VpTP~~~d~--~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eS 144 (444)
T 3vtf_A 100 ATFIAVGTPPAPDG--SADLRYVEAAARAVGRGIRAKGRWHLVVVKS 144 (444)
T ss_dssp EEEECCCCCBCTTS--SBCCHHHHHHHHHHHHHHHHHCSCCEEEECS
T ss_pred ceEEEecCCCCCCC--CCCcHHHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 66777666532211 1111 1256788888999863 4 444443
No 392
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=46.88 E-value=49 Score=24.13 Aligned_cols=35 Identities=3% Similarity=0.002 Sum_probs=22.8
Q ss_pred eEEEEcCccc---ccCcC--CCCcEEEEeCCHHHHHHHHH
Q psy13086 20 EFVDVGCGKL---YLPMF--PSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 20 ~iLDiGCG~G---la~~~--p~~~v~GiDis~~~l~~a~~ 54 (169)
+|+=+|+|.= +++.. .+..|+.+|.+++.++...+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~ 41 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAK 41 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 3566776542 33322 35789999999988776543
No 393
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=46.12 E-value=38 Score=26.77 Aligned_cols=80 Identities=11% Similarity=0.049 Sum_probs=46.3
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-c---------chh
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-C---------KYK 78 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~---------h~~ 78 (169)
.++.+||=+|++.| +++. -+++|+++ .++.-++.+++- . .+.+ . .+..+.. . ...
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~-~Ga~Vi~~-~~~~~~~~~~~l-G--a~~i--~-~~~~~~~~~~~~~~~~g~D~v 220 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALA-RGARVFAT-ARGSDLEYVRDL-G--ATPI--D-ASREPEDYAAEHTAGQGFDLV 220 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHH-TTCEEEEE-ECHHHHHHHHHH-T--SEEE--E-TTSCHHHHHHHHHTTSCEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHH-CCCEEEEE-eCHHHHHHHHHc-C--CCEe--c-cCCCHHHHHHHHhcCCCceEE
Confidence 34689999996555 4443 35699999 888777777542 1 1221 1 1111100 0 000
Q ss_pred hhcccHHHHHHHHHhccCCcEEEEE
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
-..+....+....+.|+++|++++.
T Consensus 221 id~~g~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 221 YDTLGGPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EESSCTHHHHHHHHHEEEEEEEEES
T ss_pred EECCCcHHHHHHHHHHhcCCeEEEE
Confidence 0001235788888999999999874
No 394
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=45.85 E-value=1.1e+02 Score=24.30 Aligned_cols=52 Identities=10% Similarity=0.070 Sum_probs=32.9
Q ss_pred CCCeEEEEcCccc----ccC--cCCCCcEEE-EeCCHHHHHHHHHHhc--------------cccceEEEeCC
Q psy13086 17 KKVEFVDVGCGKL----YLP--MFPSTLILG-LEIRVKVSDYVIDEWS--------------LYLKKMFFLYP 68 (169)
Q Consensus 17 ~~~~iLDiGCG~G----la~--~~p~~~v~G-iDis~~~l~~a~~~~~--------------~~~d~v~~~f~ 68 (169)
+.-+|.=||||.. ++. ..|+.+++| +|.+++..+.+.++.. ..+|.|.+.-|
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCC
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 3468999999976 111 237788775 5999876665544421 34787776544
No 395
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=45.48 E-value=1.1e+02 Score=24.09 Aligned_cols=93 Identities=8% Similarity=0.006 Sum_probs=56.1
Q ss_pred CeEEEEcCccc-ccCcCCCCcEEEEeCCHHHHHHHHHHhc--------------cccceEEEeCCCCcccccchhhhccc
Q psy13086 19 VEFVDVGCGKL-YLPMFPSTLILGLEIRVKVSDYVIDEWS--------------LYLKKMFFLYPDPHFKRCKYKWRIIN 83 (169)
Q Consensus 19 ~~iLDiGCG~G-la~~~p~~~v~GiDis~~~l~~a~~~~~--------------~~~d~v~~~f~d~~f~~~h~~~~~~~ 83 (169)
..||-+|-..| ++...+...+..+--+-......+.++. +.+|.+.+..|-. +. ..
T Consensus 21 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pk~-------~~--~~ 91 (343)
T 2pjd_A 21 SRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGDNARFSLVATADDVADCDTLIYYWPKN-------KP--EA 91 (343)
T ss_dssp CEEEEEECCCSSHHHHSCCSEEEEEESBHHHHHHHHHHHGGGEEECSSCCHHHHTTCSEEEEECCSS-------HH--HH
T ss_pred CeEEEEcCCCChhhhhhhhCCCEEEECCHHHHHHHHhhcCCceEeccCCCccccCCCCEEEEECCCC-------hH--HH
Confidence 46999999999 5444444455555444333332233311 1355555544421 11 12
Q ss_pred HHHHHHHHHhccCCcEEEEEeCChHHHHHHHHHHhcC
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITDVKDLHDWIVSHFTEH 120 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d~~~~~~~~~~~~~~~ 120 (169)
...+..+.+.+.||+.+++....+.....+...+...
T Consensus 92 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 128 (343)
T 2pjd_A 92 QFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADY 128 (343)
T ss_dssp HHHHHHHHTTSCTTCEEEEEEEGGGTGGGHHHHHTTT
T ss_pred HHHHHHHHHhCCCCCEEEEEEecCCCHHhHHHHHHHh
Confidence 5688999999999999999877776665566666543
No 396
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=45.25 E-value=29 Score=27.07 Aligned_cols=79 Identities=13% Similarity=0.105 Sum_probs=46.9
Q ss_pred eEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcc-c-----ccchhhhcccHHH
Q psy13086 20 EFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHF-K-----RCKYKWRIINQNL 86 (169)
Q Consensus 20 ~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f-~-----~~h~~~~~~~~~~ 86 (169)
.||=+|++.| +++.. +++|++++.|+.-++.+++- . .|.+. .+.+... . .....-..+....
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l-G--a~~vi-~~~~~~~~~~~~~~~~d~v~d~~g~~~ 223 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL-G--ANRIL-SRDEFAESRPLEKQLWAGAIDTVGDKV 223 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH-T--CSEEE-EGGGSSCCCSSCCCCEEEEEESSCHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-C--CCEEE-ecCCHHHHHhhcCCCccEEEECCCcHH
Confidence 4999998555 45543 56999999999888877652 1 22221 1111100 0 0000000122458
Q ss_pred HHHHHHhccCCcEEEEE
Q psy13086 87 LSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 87 l~~~~rvLkpGG~l~i~ 103 (169)
++...+.|+|+|++++.
T Consensus 224 ~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 224 LAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp HHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHhcCCEEEEE
Confidence 99999999999999875
No 397
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=43.88 E-value=23 Score=28.43 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=33.0
Q ss_pred CCCeEEEEcCcc-c---cc---CcCCCCcEEE-EeCCHHHHHHHHHHhc--------------cccceEEEeCC
Q psy13086 17 KKVEFVDVGCGK-L---YL---PMFPSTLILG-LEIRVKVSDYVIDEWS--------------LYLKKMFFLYP 68 (169)
Q Consensus 17 ~~~~iLDiGCG~-G---la---~~~p~~~v~G-iDis~~~l~~a~~~~~--------------~~~d~v~~~f~ 68 (169)
+..+|.=||||. | ++ ...|+.++++ +|.++...+.+.++.. ..+|.|.+.-|
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSC
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCC
Confidence 346788899998 5 21 2347778875 4999876655443321 35677776544
No 398
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=43.83 E-value=1.3e+02 Score=24.43 Aligned_cols=53 Identities=13% Similarity=0.023 Sum_probs=31.9
Q ss_pred CCeEEEEcCccc-----ccCcCC-CCcEEEE-eCCHHHHHHHHHHh--c---------cccceEEEeCCCC
Q psy13086 18 KVEFVDVGCGKL-----YLPMFP-STLILGL-EIRVKVSDYVIDEW--S---------LYLKKMFFLYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p-~~~v~Gi-Dis~~~l~~a~~~~--~---------~~~d~v~~~f~d~ 70 (169)
..+|.=||||-| .....| +.+++|| |.+++-.+...++. + ..+|.+.+.-|++
T Consensus 7 ~~rv~VvG~G~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~ 77 (372)
T 4gmf_A 7 KQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRST 77 (372)
T ss_dssp CEEEEEECSTTTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--
T ss_pred CCEEEEEehHHHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCc
Confidence 568999999999 123345 4688875 88776544433332 2 4567776655543
No 399
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=43.38 E-value=29 Score=27.50 Aligned_cols=81 Identities=7% Similarity=0.050 Sum_probs=39.8
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccc-cc--------chhh
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFK-RC--------KYKW 79 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~-~~--------h~~~ 79 (169)
.++.+||=+|++.| +++......|++++ +..-.+.++ + ..+.+.- .++.+. .. ...-
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~--ga~~~~~--~~~~~~~~~~~~~~~g~Dvv~ 213 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--D--SVTHLFD--RNADYVQEVKRISAEGVDIVL 213 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--G--GSSEEEE--TTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--c--CCcEEEc--CCccHHHHHHHhcCCCceEEE
Confidence 34788999999655 55555567899998 554444443 1 1222211 111110 00 0000
Q ss_pred hcccHHHHHHHHHhccCCcEEEEE
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
..+....++...+.|++||++++.
T Consensus 214 d~~g~~~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 214 DCLCGDNTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp EECC-------CTTEEEEEEEEEE
T ss_pred ECCCchhHHHHHHHhhcCCEEEEE
Confidence 001123457788999999999876
No 400
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=43.33 E-value=86 Score=26.18 Aligned_cols=84 Identities=10% Similarity=0.039 Sum_probs=50.0
Q ss_pred CeEEEEcCccc---ccCcC--CCCcEEEEeCCHHHHHHHHHH---------------------hc---------cccceE
Q psy13086 19 VEFVDVGCGKL---YLPMF--PSTLILGLEIRVKVSDYVIDE---------------------WS---------LYLKKM 63 (169)
Q Consensus 19 ~~iLDiGCG~G---la~~~--p~~~v~GiDis~~~l~~a~~~---------------------~~---------~~~d~v 63 (169)
.+|.=||+|.= +|..+ .+.+|+++|+++..++..++. +. ...|.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 35777888753 33322 246999999999877665431 11 345666
Q ss_pred EEeCCCCcccccchhhhc-ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 64 FFLYPDPHFKRCKYKWRI-INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 64 ~~~f~d~~f~~~h~~~~~-~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
.+..|.|.-... ...+ ...++++.+...|++|-.++..+
T Consensus 83 iiaVptp~~~~~--~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 83 FIAVGTPAGEDG--SADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp EECCCCCBCTTS--SBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred EEEcCCCcccCC--CcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 666665531100 0000 12467888899999887776655
No 401
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=43.04 E-value=6.9 Score=31.65 Aligned_cols=68 Identities=13% Similarity=0.087 Sum_probs=42.5
Q ss_pred CCeEEEEcCccc-----ccCcCCC----CcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccccchhhhcccHHHHH
Q psy13086 18 KVEFVDVGCGKL-----YLPMFPS----TLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRCKYKWRIINQNLLS 88 (169)
Q Consensus 18 ~~~iLDiGCG~G-----la~~~p~----~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~h~~~~~~~~~~l~ 88 (169)
...|+=||||.| ++..+|+ .+++-+|.++.... +. ....|.+ ..+.+.+.-++
T Consensus 61 ~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~-----l~-~~~NV~l------------i~~fvde~dl~ 122 (307)
T 3mag_A 61 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPI-----LN-GLRDVTL------------VTRFVDEEYLR 122 (307)
T ss_dssp TCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGG-----GT-TCTTEEE------------EECCCCHHHHH
T ss_pred CcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhh-----hc-CCCcEEE------------EeccCCHHHHH
Confidence 569999999999 6665554 69999999653110 00 1122221 11223456677
Q ss_pred HHHHhccCCcEEEEE
Q psy13086 89 EYAYVLSEGGIVYTI 103 (169)
Q Consensus 89 ~~~rvLkpGG~l~i~ 103 (169)
++...++...+++|.
T Consensus 123 ~l~~~~~~~~iLLIS 137 (307)
T 3mag_A 123 SIKKQLHPSKIILIS 137 (307)
T ss_dssp HHHHHHTTSCEEEEE
T ss_pred HHHHhccCCCEEEEE
Confidence 788888877777775
No 402
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=43.01 E-value=74 Score=25.99 Aligned_cols=95 Identities=9% Similarity=-0.001 Sum_probs=54.2
Q ss_pred eEEEEcCcc-c------ccCcCCCCcEEEEeCCHHHHHHHHHH-------------------hc---------cccceEE
Q psy13086 20 EFVDVGCGK-L------YLPMFPSTLILGLEIRVKVSDYVIDE-------------------WS---------LYLKKMF 64 (169)
Q Consensus 20 ~iLDiGCG~-G------la~~~p~~~v~GiDis~~~l~~a~~~-------------------~~---------~~~d~v~ 64 (169)
+|.=||+|. | +++ +.+|+++|.++.-++..++. +. ...|.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvi 78 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVI 78 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEE
T ss_pred EEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEE
Confidence 466678875 3 333 46899999998877655421 01 2356666
Q ss_pred EeCCCCcccccchhhhc-ccHHHHHHHHHhccCCcEEEE-EeCChHHHHHHHHHHhc
Q psy13086 65 FLYPDPHFKRCKYKWRI-INQNLLSEYAYVLSEGGIVYT-ITDVKDLHDWIVSHFTE 119 (169)
Q Consensus 65 ~~f~d~~f~~~h~~~~~-~~~~~l~~~~rvLkpGG~l~i-~~d~~~~~~~~~~~~~~ 119 (169)
+..|.+.-.. +....+ ...++++.+.. |++|..++. +|......+.+.+.+..
T Consensus 79 iavpt~~~~~-~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~ 133 (402)
T 1dlj_A 79 IATPTNYNSR-INYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT 133 (402)
T ss_dssp ECCCCCEETT-TTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC
T ss_pred EecCCCcccC-CCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC
Confidence 6666552100 000000 12567788888 899887776 45445555555555543
No 403
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=42.60 E-value=1.1e+02 Score=24.96 Aligned_cols=87 Identities=15% Similarity=0.017 Sum_probs=52.9
Q ss_pred CCeEEEEcCccc-ccCcC-CCCcEEEEeCCHHHHHHHHHH-hc-----------cccceEEEeCCCCcccccchhhhccc
Q psy13086 18 KVEFVDVGCGKL-YLPMF-PSTLILGLEIRVKVSDYVIDE-WS-----------LYLKKMFFLYPDPHFKRCKYKWRIIN 83 (169)
Q Consensus 18 ~~~iLDiGCG~G-la~~~-p~~~v~GiDis~~~l~~a~~~-~~-----------~~~d~v~~~f~d~~f~~~h~~~~~~~ 83 (169)
..+||.++-+.| ++-.. +..++..+.-|.......+.+ +. ..+|.+.+..| +.+. .. ..
T Consensus 46 ~~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~v~~~~P----k~k~-~~--~~ 118 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLEGRMAVERLETSRAAFRCLTASGLQARLALPWEAAAGAYDLVVLALP----AGRG-TA--YV 118 (381)
T ss_dssp SSEEEESSCTTSTTTGGGBTTBEEEEEECBHHHHHHHHHTTCCCEECCGGGSCTTCEEEEEEECC----GGGC-HH--HH
T ss_pred CCcEEEecCCCCccccccCCCCceEEEeCcHHHHHHHHHcCCCccccCCccCCcCCCCEEEEECC----cchh-HH--HH
Confidence 357999999999 44433 456788887676544433322 11 33455555444 1110 00 12
Q ss_pred HHHHHHHHHhccCCcEEEEEeCChHHHH
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITDVKDLHD 111 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d~~~~~~ 111 (169)
...|.++.+.|+|||.++++-....-.+
T Consensus 119 ~~~l~~~~~~l~~g~~i~~~g~~~~g~~ 146 (381)
T 3dmg_A 119 QASLVAAARALRMGGRLYLAGDKNKGFE 146 (381)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEGGGTHH
T ss_pred HHHHHHHHHhCCCCCEEEEEEccHHHHH
Confidence 5688999999999999999875444333
No 404
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=42.50 E-value=87 Score=26.12 Aligned_cols=102 Identities=10% Similarity=-0.013 Sum_probs=56.8
Q ss_pred CeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHH---------------H-----Hhc---------cccce
Q psy13086 19 VEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVI---------------D-----EWS---------LYLKK 62 (169)
Q Consensus 19 ~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~---------------~-----~~~---------~~~d~ 62 (169)
.+|.=||+|.= ++...++.+|+++|++++-++..+ + ++. ...|.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 46888999863 444333578999999987666532 1 121 34567
Q ss_pred EEEeCCCCcccccc---hhhhc-ccHHHHHHHHHhccCCcEEEEEe-CChHHHHHHHHHHhcC
Q psy13086 63 MFFLYPDPHFKRCK---YKWRI-INQNLLSEYAYVLSEGGIVYTIT-DVKDLHDWIVSHFTEH 120 (169)
Q Consensus 63 v~~~f~d~~f~~~h---~~~~~-~~~~~l~~~~rvLkpGG~l~i~~-d~~~~~~~~~~~~~~~ 120 (169)
+.+..|.|.-.... ....+ .....++++...|++|..++..+ -.+...+.+...+.+.
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~ 148 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDAN 148 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHT
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHh
Confidence 77766665311000 00000 01467788888899887665543 2333344455555443
No 405
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=42.43 E-value=74 Score=26.23 Aligned_cols=82 Identities=15% Similarity=0.177 Sum_probs=47.2
Q ss_pred eEEEEcCccc---ccCcC--CCCcEEEEeCCHHHHHHHHHH---------------------hc---------cccceEE
Q psy13086 20 EFVDVGCGKL---YLPMF--PSTLILGLEIRVKVSDYVIDE---------------------WS---------LYLKKMF 64 (169)
Q Consensus 20 ~iLDiGCG~G---la~~~--p~~~v~GiDis~~~l~~a~~~---------------------~~---------~~~d~v~ 64 (169)
+|.=||+|.= +|..+ .+.+|+++|.+++.++..++. +. ...|.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvvi 81 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSF 81 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEEE
Confidence 3566788763 33322 246899999999877665431 11 2456666
Q ss_pred EeCCCCcccccchhhhc-ccHHHHHHHHHhccC---CcEEEEE
Q psy13086 65 FLYPDPHFKRCKYKWRI-INQNLLSEYAYVLSE---GGIVYTI 103 (169)
Q Consensus 65 ~~f~d~~f~~~h~~~~~-~~~~~l~~~~rvLkp---GG~l~i~ 103 (169)
+..|.|.-... ...+ ...++++++...|++ |..++..
T Consensus 82 iaVptp~~~~~--~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~ 122 (436)
T 1mv8_A 82 ICVGTPSKKNG--DLDLGYIETVCREIGFAIREKSERHTVVVR 122 (436)
T ss_dssp ECCCCCBCTTS--SBCCHHHHHHHHHHHHHHTTCCSCCEEEEC
T ss_pred EEcCCCcccCC--CcchHHHHHHHHHHHHHhcccCCCcEEEEe
Confidence 66665531100 0000 024678888889998 6655543
No 406
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=41.76 E-value=56 Score=25.79 Aligned_cols=38 Identities=8% Similarity=0.095 Sum_probs=28.8
Q ss_pred CCeEEEEcCcc-c--ccCcC-CCCcEEEEeCCHHHHHHHHHH
Q psy13086 18 KVEFVDVGCGK-L--YLPMF-PSTLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~~-p~~~v~GiDis~~~l~~a~~~ 55 (169)
..+|-=||+|+ | +|... .+..|++.|.+++.++.+.+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~laaG~~V~v~d~~~~~~~~~~~~ 53 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIASKHEVVLQDVSEKALEAAREQ 53 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH
Confidence 46788899986 5 33211 467999999999999888776
No 407
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=41.50 E-value=35 Score=28.65 Aligned_cols=99 Identities=17% Similarity=0.159 Sum_probs=56.5
Q ss_pred CeEEEEcCcc-c--ccCcC--CCCcEEEEeCCHHHHHHHHHH---------------------hc-----cccceEEEeC
Q psy13086 19 VEFVDVGCGK-L--YLPMF--PSTLILGLEIRVKVSDYVIDE---------------------WS-----LYLKKMFFLY 67 (169)
Q Consensus 19 ~~iLDiGCG~-G--la~~~--p~~~v~GiDis~~~l~~a~~~---------------------~~-----~~~d~v~~~f 67 (169)
.++-=||.|. | +|..+ .+.+|+|+|++++-++..++. +. ...|.+++..
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii~V 91 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIAV 91 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEEECC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEEEEe
Confidence 4556677775 3 33332 256999999999877765431 11 3456677777
Q ss_pred CCCcccccchhhhc-ccHHHHHHHHHhccCCcEEEEEeC-ChHHHHHHHHHH
Q psy13086 68 PDPHFKRCKYKWRI-INQNLLSEYAYVLSEGGIVYTITD-VKDLHDWIVSHF 117 (169)
Q Consensus 68 ~d~~f~~~h~~~~~-~~~~~l~~~~rvLkpGG~l~i~~d-~~~~~~~~~~~~ 117 (169)
|.|.-...+....+ ......+.+...|++|-.++..+- .+...+.+...+
T Consensus 92 pTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 92 PTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp CCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred CCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 77642110000000 013567888899999987776543 344455454443
No 408
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=41.15 E-value=47 Score=27.46 Aligned_cols=38 Identities=3% Similarity=-0.094 Sum_probs=28.1
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHH
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~ 54 (169)
.++.+||=+|++.| +|+. -++++++++.++.-++.+++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~-~Ga~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALA-GGANPICVVSSPQKAEICRA 271 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-cCCeEEEEECCHHHHHHHHh
Confidence 34688999998545 4444 36799999999888887754
No 409
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=40.30 E-value=1.3e+02 Score=23.58 Aligned_cols=53 Identities=8% Similarity=0.087 Sum_probs=33.7
Q ss_pred CCeEEEEcCccc------ccCcCCCCcEEEE-eCCHHHHHHHHHHh--c-----------cccceEEEeCCCC
Q psy13086 18 KVEFVDVGCGKL------YLPMFPSTLILGL-EIRVKVSDYVIDEW--S-----------LYLKKMFFLYPDP 70 (169)
Q Consensus 18 ~~~iLDiGCG~G------la~~~p~~~v~Gi-Dis~~~l~~a~~~~--~-----------~~~d~v~~~f~d~ 70 (169)
..+|.=||||.= .....|+.+++++ |.++...+.+.++. + ..+|.|.+.-|+.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 77 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPND 77 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTT
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChH
Confidence 457888999853 2234467787755 99987666544332 1 4578887765553
No 410
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=39.64 E-value=66 Score=27.33 Aligned_cols=87 Identities=13% Similarity=0.095 Sum_probs=50.7
Q ss_pred CCeEEEEcCccc---ccCc---CCCC-cEEEEeCCHH----HHHHHHH-----------------------Hhc------
Q psy13086 18 KVEFVDVGCGKL---YLPM---FPST-LILGLEIRVK----VSDYVID-----------------------EWS------ 57 (169)
Q Consensus 18 ~~~iLDiGCG~G---la~~---~p~~-~v~GiDis~~----~l~~a~~-----------------------~~~------ 57 (169)
-.+|-=||+|.= +|.. .|+. +|+++|++++ -++..++ ++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~e 97 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFS 97 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHH
Confidence 356888888875 3322 2466 8999999988 6554432 111
Q ss_pred --cccceEEEeCCCCcccccchhhhc-ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 58 --LYLKKMFFLYPDPHFKRCKYKWRI-INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 58 --~~~d~v~~~f~d~~f~~~h~~~~~-~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
...|.+.+..|.|.-........+ ......+.+...|+||-.++..+
T Consensus 98 a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 147 (478)
T 3g79_A 98 RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES 147 (478)
T ss_dssp GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 345666666666641110000000 01356788899999998777654
No 411
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=38.76 E-value=83 Score=24.22 Aligned_cols=73 Identities=10% Similarity=0.085 Sum_probs=46.1
Q ss_pred CCeEEEEcCccc---cc----Cc-CCCCcEEEEeCCHHHHHHHHHHhc-----------cccceEEEeCCCCcccccchh
Q psy13086 18 KVEFVDVGCGKL---YL----PM-FPSTLILGLEIRVKVSDYVIDEWS-----------LYLKKMFFLYPDPHFKRCKYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~G---la----~~-~p~~~v~GiDis~~~l~~a~~~~~-----------~~~d~v~~~f~d~~f~~~h~~ 78 (169)
..+|.=||||.= ++ .. ++..+|+..|.++.-++.+.++.. ...|.|.+..++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p~-------- 74 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPH-------- 74 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCGG--------
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCHH--------
Confidence 456888999853 22 22 233489999999988877766422 3456666655421
Q ss_pred hhcccHHHHHHHHHh-ccCCcEEE
Q psy13086 79 WRIINQNLLSEYAYV-LSEGGIVY 101 (169)
Q Consensus 79 ~~~~~~~~l~~~~rv-LkpGG~l~ 101 (169)
...++++++... |+++-.++
T Consensus 75 ---~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 75 ---QIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp ---GHHHHHHHHHHHHHTTTCEEE
T ss_pred ---HHHHHHHHHHhhccCCCeEEE
Confidence 125788888887 77664443
No 412
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=38.44 E-value=76 Score=25.98 Aligned_cols=38 Identities=5% Similarity=-0.050 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHH
Q psy13086 16 EKKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 16 ~~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~ 54 (169)
.++.+||=+|++.| +++. -++++++++.++.-++.+++
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~-~Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKN-GGGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHHHh
Confidence 44788999998555 3443 46799999999888777754
No 413
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=37.81 E-value=25 Score=28.12 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=28.4
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHH
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~ 54 (169)
++.+||=+|+| | +|+..++++|+++|.|+.-++.|++
T Consensus 186 ~g~~VlV~GaG-~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 186 PGAYVAIVGVG-GLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCEEEEECCS-HHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCC-HHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 46889999985 6 5555436799999999988777764
No 414
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=36.96 E-value=85 Score=26.54 Aligned_cols=29 Identities=7% Similarity=-0.075 Sum_probs=21.3
Q ss_pred CeEEEEcCcc-c--ccCc--CCCCcEEEEeCCHH
Q psy13086 19 VEFVDVGCGK-L--YLPM--FPSTLILGLEIRVK 47 (169)
Q Consensus 19 ~~iLDiGCG~-G--la~~--~p~~~v~GiDis~~ 47 (169)
.+|-=||+|+ | +|.. ..+..|++.|++++
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5688899986 4 3332 24679999999987
No 415
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=36.89 E-value=1.5e+02 Score=23.17 Aligned_cols=50 Identities=10% Similarity=0.210 Sum_probs=31.8
Q ss_pred eEEEEcCccc------ccCcCCCCcEEE-EeCCHHHHHHHHHHhc--------------cccceEEEeCCC
Q psy13086 20 EFVDVGCGKL------YLPMFPSTLILG-LEIRVKVSDYVIDEWS--------------LYLKKMFFLYPD 69 (169)
Q Consensus 20 ~iLDiGCG~G------la~~~p~~~v~G-iDis~~~l~~a~~~~~--------------~~~d~v~~~f~d 69 (169)
+|.=||||.- .....|+.++++ +|.++...+.+.++.. ..+|.|.+.-|+
T Consensus 4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCC
Confidence 5777999863 122357788886 5999876665544321 267777765554
No 416
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=36.74 E-value=74 Score=25.41 Aligned_cols=81 Identities=16% Similarity=0.200 Sum_probs=46.3
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc-c-h---hhhc---
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC-K-Y---KWRI--- 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~-h-~---~~~~--- 81 (169)
++.+||=+|++.| +|+. -+++++++. |+.-++.+++- ..|.+ +.+.++.+... . . .-++
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~-~Ga~Vi~~~-~~~~~~~~~~l---Ga~~v-i~~~~~~~~~~v~~~t~g~~d~v~d 237 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRL-SGYIPIATC-SPHNFDLAKSR---GAEEV-FDYRAPNLAQTIRTYTKNNLRYALD 237 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHH-TTCEEEEEE-CGGGHHHHHHT---TCSEE-EETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHH-CCCEEEEEe-CHHHHHHHHHc---CCcEE-EECCCchHHHHHHHHccCCccEEEE
Confidence 4688999999654 4444 356899885 87766766542 12222 22222211100 0 0 0000
Q ss_pred --ccHHHHHHHHHhc-cCCcEEEEE
Q psy13086 82 --INQNLLSEYAYVL-SEGGIVYTI 103 (169)
Q Consensus 82 --~~~~~l~~~~rvL-kpGG~l~i~ 103 (169)
-.+..++...+.| ++||+++..
T Consensus 238 ~~g~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 238 CITNVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp SSCSHHHHHHHHHHSCTTCEEEEES
T ss_pred CCCchHHHHHHHHHhhcCCCEEEEE
Confidence 1256788888999 699999875
No 417
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=36.32 E-value=51 Score=27.68 Aligned_cols=101 Identities=14% Similarity=0.080 Sum_probs=58.4
Q ss_pred CCeEEEEcCcc-c--ccCcC--CCCcEEEEeCCHHHHHHHHHH---------------------hc---------cccce
Q psy13086 18 KVEFVDVGCGK-L--YLPMF--PSTLILGLEIRVKVSDYVIDE---------------------WS---------LYLKK 62 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~~--p~~~v~GiDis~~~l~~a~~~---------------------~~---------~~~d~ 62 (169)
..+|-=||+|. | +|..+ .+.+|+|+|+++.-++..++. +. ...|.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 45677788885 3 44332 246899999999866654321 11 34567
Q ss_pred EEEeCCCCcccccchhhhc-ccHHHHHHHHHhccCCcEEEEEeCC-hHHHHHHHHHHhc
Q psy13086 63 MFFLYPDPHFKRCKYKWRI-INQNLLSEYAYVLSEGGIVYTITDV-KDLHDWIVSHFTE 119 (169)
Q Consensus 63 v~~~f~d~~f~~~h~~~~~-~~~~~l~~~~rvLkpGG~l~i~~d~-~~~~~~~~~~~~~ 119 (169)
+++..|.|.-.... ...+ ...++++.+...|++|-.++..+-. +...+.+.+.+.+
T Consensus 88 vii~Vptp~~~~~~-~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 88 VFIAVGTPSRRGDG-HADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EEECCCCCBCTTTC-CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEEcCCCCccccC-CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 77776666421000 0000 0246778899999999888776533 3444445444443
No 418
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=35.94 E-value=53 Score=26.34 Aligned_cols=39 Identities=10% Similarity=0.038 Sum_probs=28.8
Q ss_pred CCeEEEEcCcc-c--ccCc--CCCCcEEEEeCCHHHHHHHHHHh
Q psy13086 18 KVEFVDVGCGK-L--YLPM--FPSTLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~--~p~~~v~GiDis~~~l~~a~~~~ 56 (169)
..+|-=||+|+ | +|.. ..+..|+-.|++++.++.+.+++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i 49 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENI 49 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 46788999986 3 4443 35679999999999888876544
No 419
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=35.61 E-value=77 Score=25.26 Aligned_cols=82 Identities=10% Similarity=0.083 Sum_probs=44.1
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCcccc-cc--hhhhcc----
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKR-CK--YKWRII---- 82 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~-~h--~~~~~~---- 82 (169)
++.+||=+|+..| +++.. +++|++++ ++.-++.+++ +. .|.+ +.+.++.+.. .. ..-+++
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~-lG--a~~v-~~~~~~~~~~~~~~~~g~D~vid~~ 256 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRK-LG--ADDV-IDYKSGSVEEQLKSLKPFDFILDNV 256 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHH-TT--CSEE-EETTSSCHHHHHHTSCCBSEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHH-cC--CCEE-EECCchHHHHHHhhcCCCCEEEECC
Confidence 4688999995444 44443 57899999 7666666643 21 2221 1222211110 00 000000
Q ss_pred -cH-HHHHHHHHhccCCcEEEEEe
Q psy13086 83 -NQ-NLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 83 -~~-~~l~~~~rvLkpGG~l~i~~ 104 (169)
.. ..++...+.|++||+++...
T Consensus 257 g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 257 GGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp CTTHHHHGGGGBCSSSCCEEEESC
T ss_pred CChhhhhHHHHHhhcCCcEEEEeC
Confidence 12 35577788999999998764
No 420
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=34.48 E-value=1e+02 Score=24.76 Aligned_cols=51 Identities=16% Similarity=0.285 Sum_probs=31.9
Q ss_pred CeEEEEcCc-cc------ccCcCCCCcEEE-EeCCHHHHHHHHHHh--c-----------cccceEEEeCCC
Q psy13086 19 VEFVDVGCG-KL------YLPMFPSTLILG-LEIRVKVSDYVIDEW--S-----------LYLKKMFFLYPD 69 (169)
Q Consensus 19 ~~iLDiGCG-~G------la~~~p~~~v~G-iDis~~~l~~a~~~~--~-----------~~~d~v~~~f~d 69 (169)
.+|.=|||| .. .....|+.++++ +|.++...+.+.++. + ..+|.|.+.-|+
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~ 74 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPH 74 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCG
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCc
Confidence 467789999 44 122457777775 699987665544332 1 358888765554
No 421
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=33.40 E-value=29 Score=27.19 Aligned_cols=38 Identities=11% Similarity=-0.066 Sum_probs=27.2
Q ss_pred eEEEEcCccc---ccCcCCCC-cEEEEeCCHHHHHHHHHHhc
Q psy13086 20 EFVDVGCGKL---YLPMFPST-LILGLEIRVKVSDYVIDEWS 57 (169)
Q Consensus 20 ~iLDiGCG~G---la~~~p~~-~v~GiDis~~~l~~a~~~~~ 57 (169)
+|||+=||-| ++-...+. .+.++|+++.+++.-+.|.+
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~ 43 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS 43 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC
Confidence 5899999999 33222233 56799999998887776644
No 422
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=32.94 E-value=34 Score=26.74 Aligned_cols=76 Identities=13% Similarity=0.069 Sum_probs=44.3
Q ss_pred eEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCC-----------cccccchhhhc
Q psy13086 20 EFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDP-----------HFKRCKYKWRI 81 (169)
Q Consensus 20 ~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~-----------~f~~~h~~~~~ 81 (169)
+||=+|++.| +++.. ++++++++.+++-++.+++ +. .|.+ +.+.+. .++.. -..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~-lG--a~~~-i~~~~~~~~~~~~~~~~~~d~v---id~ 223 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV-LG--AKEV-LAREDVMAERIRPLDKQRWAAA---VDP 223 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH-TT--CSEE-EECC---------CCSCCEEEE---EEC
T ss_pred eEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH-cC--CcEE-EecCCcHHHHHHHhcCCcccEE---EEC
Confidence 7999998545 44443 5789999999877777754 21 1211 111111 01100 000
Q ss_pred ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
+....++...+.|++||++++.
T Consensus 224 ~g~~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 224 VGGRTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp STTTTHHHHHHTEEEEEEEEEC
T ss_pred CcHHHHHHHHHhhccCCEEEEE
Confidence 1124678888999999999875
No 423
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=32.31 E-value=1.3e+02 Score=23.03 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=26.0
Q ss_pred CeEEEEcCcc-c--ccCc--CCCCcEEEEeCCHHHHHHHHHH
Q psy13086 19 VEFVDVGCGK-L--YLPM--FPSTLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 19 ~~iLDiGCG~-G--la~~--~p~~~v~GiDis~~~l~~a~~~ 55 (169)
.+|.=||+|+ | +|.. ..+.+|+++|.+++.++.++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 4677788885 3 3332 2356999999999888777654
No 424
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=31.84 E-value=1.8e+02 Score=22.60 Aligned_cols=91 Identities=11% Similarity=0.103 Sum_probs=49.3
Q ss_pred CCeEEEEcCccc---cc---CcCCCCcEEE-EeCCHHHHHHHHHHhc--------------cccceEEEeCCCCcccccc
Q psy13086 18 KVEFVDVGCGKL---YL---PMFPSTLILG-LEIRVKVSDYVIDEWS--------------LYLKKMFFLYPDPHFKRCK 76 (169)
Q Consensus 18 ~~~iLDiGCG~G---la---~~~p~~~v~G-iDis~~~l~~a~~~~~--------------~~~d~v~~~f~d~~f~~~h 76 (169)
..+|.=||||.- ++ ...++.++++ +|.++.-.+.+.++.. ..+|.|.+.-|+..
T Consensus 5 ~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~----- 79 (330)
T 3e9m_A 5 KIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQG----- 79 (330)
T ss_dssp CEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGG-----
T ss_pred eEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHH-----
Confidence 457888999864 22 2346778886 5988776555443321 35777776554431
Q ss_pred hhhhcccHHHHHHHHHhccCCcEEEEEeC---ChHHHHHHHHHHhcCCC
Q psy13086 77 YKWRIINQNLLSEYAYVLSEGGIVYTITD---VKDLHDWIVSHFTEHPL 122 (169)
Q Consensus 77 ~~~~~~~~~~l~~~~rvLkpGG~l~i~~d---~~~~~~~~~~~~~~~~~ 122 (169)
..+.+...|+.|-.+++..+ ...-...+.+...+++.
T Consensus 80 ---------h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~ 119 (330)
T 3e9m_A 80 ---------HYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGV 119 (330)
T ss_dssp ---------HHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTC
T ss_pred ---------HHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCC
Confidence 22333345666655554322 23334445555555543
No 425
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=31.40 E-value=1.9e+02 Score=22.67 Aligned_cols=52 Identities=15% Similarity=0.235 Sum_probs=33.3
Q ss_pred CCeEEEEcCcc-c------ccCcCCCCcEE-EEeCCHHHHHHHHHHhc-------------cccceEEEeCCC
Q psy13086 18 KVEFVDVGCGK-L------YLPMFPSTLIL-GLEIRVKVSDYVIDEWS-------------LYLKKMFFLYPD 69 (169)
Q Consensus 18 ~~~iLDiGCG~-G------la~~~p~~~v~-GiDis~~~l~~a~~~~~-------------~~~d~v~~~f~d 69 (169)
..+|.=||||. | +....++.+++ .+|.++...+.+.++.. ..+|.|.+.-|+
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCG
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCc
Confidence 56799999994 4 22222677777 56999887666544321 367777765544
No 426
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=31.37 E-value=86 Score=23.36 Aligned_cols=72 Identities=10% Similarity=0.224 Sum_probs=42.8
Q ss_pred CeEEEEcCccc---cc----Cc--CCCCcEEEEeCCHHHHHHHHHHhc-----------cccceEEEeCCCCcccccchh
Q psy13086 19 VEFVDVGCGKL---YL----PM--FPSTLILGLEIRVKVSDYVIDEWS-----------LYLKKMFFLYPDPHFKRCKYK 78 (169)
Q Consensus 19 ~~iLDiGCG~G---la----~~--~p~~~v~GiDis~~~l~~a~~~~~-----------~~~d~v~~~f~d~~f~~~h~~ 78 (169)
.+|.=||||.= ++ .. .+..+|++.|.+++-++.+.++.. ...|.|.+..++..
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~------- 75 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDL------- 75 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTT-------
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHH-------
Confidence 35778898853 22 22 223389999999987777654321 34677766554321
Q ss_pred hhcccHHHHHHHHHhccCCcEEE
Q psy13086 79 WRIINQNLLSEYAYVLSEGGIVY 101 (169)
Q Consensus 79 ~~~~~~~~l~~~~rvLkpGG~l~ 101 (169)
..++++++...|+||..++
T Consensus 76 ----~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 76 ----YASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp ----HHHHC---CCSSCTTCEEE
T ss_pred ----HHHHHHHHHhhcCCCCEEE
Confidence 2467777878888877554
No 427
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=31.17 E-value=1e+02 Score=24.11 Aligned_cols=52 Identities=8% Similarity=0.051 Sum_probs=32.6
Q ss_pred CCeEEEEcCcc-c--cc---CcCCCCcEEE-EeCCHHHHHHHHHHhc-------------cccceEEEeCCC
Q psy13086 18 KVEFVDVGCGK-L--YL---PMFPSTLILG-LEIRVKVSDYVIDEWS-------------LYLKKMFFLYPD 69 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la---~~~p~~~v~G-iDis~~~l~~a~~~~~-------------~~~d~v~~~f~d 69 (169)
..+|.=||||. | ++ ...|+.++++ +|.++...+...++.. ..+|.|.+.-|+
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCG
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCc
Confidence 35688899987 4 22 2357778875 7998876665444321 367777665544
No 428
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=30.67 E-value=42 Score=26.18 Aligned_cols=76 Identities=12% Similarity=0.086 Sum_probs=44.3
Q ss_pred eEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCC-----------Ccccccchhhhc
Q psy13086 20 EFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD-----------PHFKRCKYKWRI 81 (169)
Q Consensus 20 ~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d-----------~~f~~~h~~~~~ 81 (169)
+||=+|++.| +++.. ++++++++.+++-++.+++- . .|.+. .+.+ ..++.. -..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l-G--a~~v~-~~~~~~~~~~~~~~~~~~d~v---id~ 224 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQL-G--ASEVI-SREDVYDGTLKALSKQQWQGA---VDP 224 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHH-T--CSEEE-EHHHHCSSCCCSSCCCCEEEE---EES
T ss_pred eEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-C--CcEEE-ECCCchHHHHHHhhcCCccEE---EEC
Confidence 7999998555 44433 56899999987767766542 1 11111 1100 001100 000
Q ss_pred ccHHHHHHHHHhccCCcEEEEE
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~ 103 (169)
+....+.+..+.|++||++++.
T Consensus 225 ~g~~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 225 VGGKQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CCTHHHHHHHTTEEEEEEEEEC
T ss_pred CcHHHHHHHHHhhcCCCEEEEE
Confidence 1135788899999999999875
No 429
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=30.50 E-value=2e+02 Score=22.65 Aligned_cols=93 Identities=13% Similarity=0.139 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCccc----cc---CcCCCCcEEEE-eCCHHHHHHHHHHhc-------------cccceEEEeCCCCcccc
Q psy13086 16 EKKVEFVDVGCGKL----YL---PMFPSTLILGL-EIRVKVSDYVIDEWS-------------LYLKKMFFLYPDPHFKR 74 (169)
Q Consensus 16 ~~~~~iLDiGCG~G----la---~~~p~~~v~Gi-Dis~~~l~~a~~~~~-------------~~~d~v~~~f~d~~f~~ 74 (169)
++..+|.=||||.= ++ ...|+.++++| |.++...+.+.++.. ..+|.|.+.-|+.
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~---- 100 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAV---- 100 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGG----
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcH----
Confidence 44557899999852 11 23467788755 999876655444321 3577777654432
Q ss_pred cchhhhcccHHHHHHHHHhccCCcEEEEEeC---ChHHHHHHHHHHhcCCC
Q psy13086 75 CKYKWRIINQNLLSEYAYVLSEGGIVYTITD---VKDLHDWIVSHFTEHPL 122 (169)
Q Consensus 75 ~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~d---~~~~~~~~~~~~~~~~~ 122 (169)
...+.+...|+.|-.+++.-+ ..+-...+.+...+++.
T Consensus 101 ----------~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~ 141 (350)
T 3rc1_A 101 ----------LHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGL 141 (350)
T ss_dssp ----------GHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred ----------HHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCC
Confidence 123333455666666655422 33344555565555553
No 430
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=29.79 E-value=1.4e+02 Score=23.22 Aligned_cols=38 Identities=13% Similarity=0.260 Sum_probs=26.2
Q ss_pred CCeEEEEcCcc-c--ccCcC--CCCcEEEEeCCHHHHHHHHHH
Q psy13086 18 KVEFVDVGCGK-L--YLPMF--PSTLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~~--p~~~v~GiDis~~~l~~a~~~ 55 (169)
..+|.=||+|. | ++... .+.+|+++|.++.-++.++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~ 46 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR 46 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhc
Confidence 35788899987 3 33221 346899999998877766554
No 431
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=29.67 E-value=1.4e+02 Score=23.63 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=33.7
Q ss_pred CCCeEEEEcCccc------ccCcCCCCcEEEE-eCCHHHHHHHHHH-hc-----------cccceEEEeCCC
Q psy13086 17 KKVEFVDVGCGKL------YLPMFPSTLILGL-EIRVKVSDYVIDE-WS-----------LYLKKMFFLYPD 69 (169)
Q Consensus 17 ~~~~iLDiGCG~G------la~~~p~~~v~Gi-Dis~~~l~~a~~~-~~-----------~~~d~v~~~f~d 69 (169)
+..+|.=||||.= .....|+.++++| |.++...+.|++. ++ ..+|.|.+.-|+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPN 75 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCG
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCc
Confidence 3567888999863 2223467788876 9998876655321 11 367887765544
No 432
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=29.40 E-value=1.1e+02 Score=23.15 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=46.0
Q ss_pred CCeEEEEcCcc-c------ccCcCCCCcEEEEeCCHHHHHHHHHH-h----c-------cccceEEEeCCCCcccccchh
Q psy13086 18 KVEFVDVGCGK-L------YLPMFPSTLILGLEIRVKVSDYVIDE-W----S-------LYLKKMFFLYPDPHFKRCKYK 78 (169)
Q Consensus 18 ~~~iLDiGCG~-G------la~~~p~~~v~GiDis~~~l~~a~~~-~----~-------~~~d~v~~~f~d~~f~~~h~~ 78 (169)
..+|.=||||. | ++...++.+|+++|.++..++.+++. + . ...|.|.+..|.+.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~------- 78 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK------- 78 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-------
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-------
Confidence 35688899987 3 33332356899999998877766542 1 0 23344444333221
Q ss_pred hhcccHHHHHHHHHh-ccCCcEEEEEe
Q psy13086 79 WRIINQNLLSEYAYV-LSEGGIVYTIT 104 (169)
Q Consensus 79 ~~~~~~~~l~~~~rv-LkpGG~l~i~~ 104 (169)
...+++++... |++|..++..+
T Consensus 79 ----~~~v~~~l~~~~l~~~~ivi~~~ 101 (290)
T 3b1f_A 79 ----TIDFIKILADLDLKEDVIITDAG 101 (290)
T ss_dssp ----HHHHHHHHHTSCCCTTCEEECCC
T ss_pred ----HHHHHHHHHhcCCCCCCEEEECC
Confidence 14677888777 88877665433
No 433
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=29.17 E-value=57 Score=27.80 Aligned_cols=39 Identities=10% Similarity=-0.092 Sum_probs=27.9
Q ss_pred CCeEEEEcCccc---ccCcCCCC-cEEEEeCCHHHHHHHHHHh
Q psy13086 18 KVEFVDVGCGKL---YLPMFPST-LILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 18 ~~~iLDiGCG~G---la~~~p~~-~v~GiDis~~~l~~a~~~~ 56 (169)
.-+++|+=||.| ++-...+. .+.++|+++.+++.-+.|.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhc
Confidence 468999999999 33222233 5889999998887666554
No 434
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=28.44 E-value=2.3e+02 Score=22.70 Aligned_cols=39 Identities=10% Similarity=0.042 Sum_probs=25.9
Q ss_pred CCCCeEEEEcCcc----c-----ccCcCCCCcEEE-E-eCCHHHHHHHHH
Q psy13086 16 EKKVEFVDVGCGK----L-----YLPMFPSTLILG-L-EIRVKVSDYVID 54 (169)
Q Consensus 16 ~~~~~iLDiGCG~----G-----la~~~p~~~v~G-i-Dis~~~l~~a~~ 54 (169)
++.-+|.=||||. | .....++.++++ | |.+++..+.+.+
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~ 59 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGE 59 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHH
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHH
Confidence 4456899999997 4 112335577886 4 999876665443
No 435
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=28.42 E-value=1.3e+02 Score=19.87 Aligned_cols=37 Identities=11% Similarity=0.241 Sum_probs=26.4
Q ss_pred CCeEEEEcCcc-c--ccCcC--CCCcEEEEeCCHHHHHHHHH
Q psy13086 18 KVEFVDVGCGK-L--YLPMF--PSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~~--p~~~v~GiDis~~~l~~a~~ 54 (169)
..+|+=+|||. | +++.. .+..|+++|.+++.++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~ 47 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLED 47 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 35788899975 3 33322 35799999999988877754
No 436
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=28.04 E-value=1.2e+02 Score=23.87 Aligned_cols=69 Identities=12% Similarity=-0.027 Sum_probs=37.9
Q ss_pred ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCccccc-c-h----hhhc----ccHHHHHHHHHhccCCcE
Q psy13086 30 YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPHFKRC-K-Y----KWRI----INQNLLSEYAYVLSEGGI 99 (169)
Q Consensus 30 la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~f~~~-h-~----~~~~----~~~~~l~~~~rvLkpGG~ 99 (169)
+++.. +++|+++|.++.-++.+++- ..|.+ +.+.++.+... . . .-++ .....++...+.|++||+
T Consensus 184 la~~~-Ga~Vi~~~~~~~~~~~~~~~---Ga~~~-~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~~~~~~~~l~~~G~ 258 (349)
T 3pi7_A 184 LAKEE-GFRPIVTVRRDEQIALLKDI---GAAHV-LNEKAPDFEATLREVMKAEQPRIFLDAVTGPLASAIFNAMPKRAR 258 (349)
T ss_dssp HHHHH-TCEEEEEESCGGGHHHHHHH---TCSEE-EETTSTTHHHHHHHHHHHHCCCEEEESSCHHHHHHHHHHSCTTCE
T ss_pred HHHHC-CCEEEEEeCCHHHHHHHHHc---CCCEE-EECCcHHHHHHHHHHhcCCCCcEEEECCCChhHHHHHhhhcCCCE
Confidence 44443 56999999998877777642 12222 12222111100 0 0 0000 123456788899999999
Q ss_pred EEEE
Q psy13086 100 VYTI 103 (169)
Q Consensus 100 l~i~ 103 (169)
+++.
T Consensus 259 iv~~ 262 (349)
T 3pi7_A 259 WIIY 262 (349)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9886
No 437
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=27.84 E-value=2.2e+02 Score=22.26 Aligned_cols=52 Identities=13% Similarity=0.020 Sum_probs=32.3
Q ss_pred CCeEEEEcCcc--c------ccCcCCCCcEE-EEeCCHHHHHHHHHHhc--------------cccceEEEeCCC
Q psy13086 18 KVEFVDVGCGK--L------YLPMFPSTLIL-GLEIRVKVSDYVIDEWS--------------LYLKKMFFLYPD 69 (169)
Q Consensus 18 ~~~iLDiGCG~--G------la~~~p~~~v~-GiDis~~~l~~a~~~~~--------------~~~d~v~~~f~d 69 (169)
..+|.=||||. | +....|+.+++ .+|.+++..+.+.++.. ..+|.|.+.-|+
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 92 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPV 92 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCG
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCc
Confidence 46788999993 4 22222666775 46999877665544321 357777765544
No 438
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=26.86 E-value=1.8e+02 Score=23.33 Aligned_cols=93 Identities=11% Similarity=0.128 Sum_probs=57.7
Q ss_pred CCeEEEEcCcc-c--ccCcC--CCCcEEEEeCCHHHHHHHHHH-hc---------ccc---ceEEEeCCCCcccccchhh
Q psy13086 18 KVEFVDVGCGK-L--YLPMF--PSTLILGLEIRVKVSDYVIDE-WS---------LYL---KKMFFLYPDPHFKRCKYKW 79 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~~--p~~~v~GiDis~~~l~~a~~~-~~---------~~~---d~v~~~f~d~~f~~~h~~~ 79 (169)
..+|.=||+|. | ++... .+..|++.|.++..++.+.+. +. ... |.|.+..|++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~-------- 93 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAV-------- 93 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGG--------
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHH--------
Confidence 45788899884 3 33322 346899999999877766432 11 334 77777666541
Q ss_pred hcccHHHHHHHHHhccCCcEEEEEeCC-hHHHHHHHHHHhcCC
Q psy13086 80 RIINQNLLSEYAYVLSEGGIVYTITDV-KDLHDWIVSHFTEHP 121 (169)
Q Consensus 80 ~~~~~~~l~~~~rvLkpGG~l~i~~d~-~~~~~~~~~~~~~~~ 121 (169)
...+++++...|++|..++-.+.. +.....+.+.+..++
T Consensus 94 ---v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g 133 (358)
T 4e21_A 94 ---VDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG 133 (358)
T ss_dssp ---HHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT
T ss_pred ---HHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC
Confidence 246778888999998777655433 333344445555443
No 439
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=26.39 E-value=1.1e+02 Score=23.88 Aligned_cols=54 Identities=11% Similarity=0.095 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCccc----ccC--cCCCCcEEE-EeCCHHHHHHHHHHhc--------------cccceEEEeCCC
Q psy13086 16 EKKVEFVDVGCGKL----YLP--MFPSTLILG-LEIRVKVSDYVIDEWS--------------LYLKKMFFLYPD 69 (169)
Q Consensus 16 ~~~~~iLDiGCG~G----la~--~~p~~~v~G-iDis~~~l~~a~~~~~--------------~~~d~v~~~f~d 69 (169)
++..+|-=||||.. ++. ..++.++++ +|.++...+.+.++.. ..+|.|.+.-|+
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 76 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIP 76 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCG
T ss_pred CCccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCCh
Confidence 34567888999976 111 136777764 5888765554444321 357887765554
No 440
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=26.18 E-value=1.6e+02 Score=21.91 Aligned_cols=29 Identities=10% Similarity=0.021 Sum_probs=21.1
Q ss_pred CCCeEEEEcCccc----ccCcC--CCCcEEEEeCC
Q psy13086 17 KKVEFVDVGCGKL----YLPMF--PSTLILGLEIR 45 (169)
Q Consensus 17 ~~~~iLDiGCG~G----la~~~--p~~~v~GiDis 45 (169)
++.++|=.|++.| +++.+ .+++|+.+|.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 3578999999988 44332 35789988876
No 441
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=26.09 E-value=1.2e+02 Score=27.29 Aligned_cols=38 Identities=13% Similarity=0.003 Sum_probs=29.1
Q ss_pred CeEEEEcCccc---ccC--cCCCCcEEEEeCCHHHHHHHHHHh
Q psy13086 19 VEFVDVGCGKL---YLP--MFPSTLILGLEIRVKVSDYVIDEW 56 (169)
Q Consensus 19 ~~iLDiGCG~G---la~--~~p~~~v~GiDis~~~l~~a~~~~ 56 (169)
.+|-=||+|+= +|. ...+..|+-+|++++.++.+++++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i 359 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKII 359 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHH
Confidence 57889999984 443 345789999999999888876543
No 442
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=26.00 E-value=1e+02 Score=23.11 Aligned_cols=75 Identities=12% Similarity=0.066 Sum_probs=45.6
Q ss_pred CeEEEEcCcc-c--ccCcC--CCCc-EEEEeCCHHHHHHHHHHhc-----------cccceEEEeCCCCcccccchhhhc
Q psy13086 19 VEFVDVGCGK-L--YLPMF--PSTL-ILGLEIRVKVSDYVIDEWS-----------LYLKKMFFLYPDPHFKRCKYKWRI 81 (169)
Q Consensus 19 ~~iLDiGCG~-G--la~~~--p~~~-v~GiDis~~~l~~a~~~~~-----------~~~d~v~~~f~d~~f~~~h~~~~~ 81 (169)
.+|.=||||. | ++... .+.. +..+|.+++.++.+.+++. ...|.|.+..|++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~---------- 80 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA---------- 80 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHH----------
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHH----------
Confidence 4688899985 4 33221 1345 8899999987777665422 23455544433321
Q ss_pred ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
..++++++...+++|..++-.+
T Consensus 81 -~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 81 -FAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp -HHHHHHHHHTTCCTTCEEEECC
T ss_pred -HHHHHHHHHhhcCCCcEEEECC
Confidence 1467777877888887665543
No 443
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=24.40 E-value=48 Score=26.76 Aligned_cols=35 Identities=20% Similarity=0.277 Sum_probs=23.9
Q ss_pred HHHHHHHhccCCcEEEEEeC-ChH-HHHHHHHHHhcC
Q psy13086 86 LLSEYAYVLSEGGIVYTITD-VKD-LHDWIVSHFTEH 120 (169)
Q Consensus 86 ~l~~~~rvLkpGG~l~i~~d-~~~-~~~~~~~~~~~~ 120 (169)
+++...++|+|||.|++..- ..+ -.+.+...+...
T Consensus 236 al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~ 272 (320)
T 2hwk_A 236 LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQ 272 (320)
T ss_dssp THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHh
Confidence 78888899999999999863 331 234455555544
No 444
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=24.16 E-value=2.5e+02 Score=21.70 Aligned_cols=37 Identities=5% Similarity=0.152 Sum_probs=24.7
Q ss_pred CCeEEEEcCcc-c------ccCcCCCCcEEE-EeCCHHHHHHHHH
Q psy13086 18 KVEFVDVGCGK-L------YLPMFPSTLILG-LEIRVKVSDYVID 54 (169)
Q Consensus 18 ~~~iLDiGCG~-G------la~~~p~~~v~G-iDis~~~l~~a~~ 54 (169)
..+|.=||||. | +....++.++++ +|.++...+.+.+
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~ 52 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKN 52 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHH
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHH
Confidence 46799999985 3 221346777665 5999887665443
No 445
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=23.88 E-value=1.2e+02 Score=24.48 Aligned_cols=79 Identities=13% Similarity=0.142 Sum_probs=46.4
Q ss_pred CCCeEEEEcCccc------ccCcCCCCcEEEEeCCHHHHHHHHHHhc-----------------cccceEEEeCCCCccc
Q psy13086 17 KKVEFVDVGCGKL------YLPMFPSTLILGLEIRVKVSDYVIDEWS-----------------LYLKKMFFLYPDPHFK 73 (169)
Q Consensus 17 ~~~~iLDiGCG~G------la~~~p~~~v~GiDis~~~l~~a~~~~~-----------------~~~d~v~~~f~d~~f~ 73 (169)
++.+|+=+|+|.= ++..+ +++|+++|.++.-++.+++.+. ...|.+......|..+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~ 245 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAK 245 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence 4688999999542 33333 4589999999987766654211 3456555432222111
Q ss_pred ccchhhhcccHHHHHHHHHhccCCcEEEEEe
Q psy13086 74 RCKYKWRIINQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 74 ~~h~~~~~~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
. ..++ .++..+.|||||.++...
T Consensus 246 t----~~li----~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 246 A----PKLV----SNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp C----CCCB----CHHHHTTSCTTCEEEEGG
T ss_pred C----ccee----cHHHHhcCCCCcEEEEEe
Confidence 1 1122 344557789999887643
No 446
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=23.81 E-value=1.9e+02 Score=25.80 Aligned_cols=36 Identities=14% Similarity=0.070 Sum_probs=25.7
Q ss_pred CeEEEEcCcc-c--ccCc--CCCCcEEEEeCCHHHHHHHHH
Q psy13086 19 VEFVDVGCGK-L--YLPM--FPSTLILGLEIRVKVSDYVID 54 (169)
Q Consensus 19 ~~iLDiGCG~-G--la~~--~p~~~v~GiDis~~~l~~a~~ 54 (169)
.+|-=||+|+ | +|.. ..+..|+++|++++.++.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~ 353 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIG 353 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 4688899985 3 3332 235689999999988877643
No 447
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=23.57 E-value=1.6e+02 Score=23.29 Aligned_cols=38 Identities=11% Similarity=0.055 Sum_probs=26.4
Q ss_pred CCeEEEEcCcc-c--ccCc--CCCCcEEEEeCCHHHHHHHHHH
Q psy13086 18 KVEFVDVGCGK-L--YLPM--FPSTLILGLEIRVKVSDYVIDE 55 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~--~p~~~v~GiDis~~~l~~a~~~ 55 (169)
-.+|-=||+|+ | +|.. ..+.+|++.|++++.++.++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 48 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALEN 48 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 35688889885 3 3332 2356899999999988877543
No 448
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=23.17 E-value=2.6e+02 Score=21.65 Aligned_cols=94 Identities=6% Similarity=-0.017 Sum_probs=56.0
Q ss_pred CCeEEEEcCccc---ccCcC--CCCcEEEEeCCHHHHHHHHHH-hc---------cccceEEEeCCCCcccccchhhhcc
Q psy13086 18 KVEFVDVGCGKL---YLPMF--PSTLILGLEIRVKVSDYVIDE-WS---------LYLKKMFFLYPDPHFKRCKYKWRII 82 (169)
Q Consensus 18 ~~~iLDiGCG~G---la~~~--p~~~v~GiDis~~~l~~a~~~-~~---------~~~d~v~~~f~d~~f~~~h~~~~~~ 82 (169)
..+|.=||+|.= ++... .+.+|++.|.++.-++.+.+. +. ...|.|.+..|++..
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~---------- 100 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAV---------- 100 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHH----------
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHH----------
Confidence 347888999853 33322 356899999999877665432 11 456777766665421
Q ss_pred cHHHHH--HHHHhccCCcEEEEEeC-ChHHHHHHHHHHhcCC
Q psy13086 83 NQNLLS--EYAYVLSEGGIVYTITD-VKDLHDWIVSHFTEHP 121 (169)
Q Consensus 83 ~~~~l~--~~~rvLkpGG~l~i~~d-~~~~~~~~~~~~~~~~ 121 (169)
...++. ++...|++|..++-.+. .+.....+.+.+.+++
T Consensus 101 ~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g 142 (320)
T 4dll_A 101 VQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALG 142 (320)
T ss_dssp HHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcC
Confidence 123444 56667888887765543 3444444555555443
No 449
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=22.90 E-value=2.6e+02 Score=21.37 Aligned_cols=91 Identities=9% Similarity=0.047 Sum_probs=57.1
Q ss_pred CeEEEEcCcc-c--ccCcC--CCCcEEEEeCCHHHHHHHHHH-hc---------cccceEEEeCCCCcccccchhhhccc
Q psy13086 19 VEFVDVGCGK-L--YLPMF--PSTLILGLEIRVKVSDYVIDE-WS---------LYLKKMFFLYPDPHFKRCKYKWRIIN 83 (169)
Q Consensus 19 ~~iLDiGCG~-G--la~~~--p~~~v~GiDis~~~l~~a~~~-~~---------~~~d~v~~~f~d~~f~~~h~~~~~~~ 83 (169)
.+|.=||+|. | ++... .+.+|++.|.++..++.+.+. +. . .|.|.+..|++.. .
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~----------~ 84 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQ----------V 84 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHH----------H
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHH----------H
Confidence 4688899985 3 33322 246899999998876665542 11 4 6777776665421 1
Q ss_pred HHHHHHHHHhccCCcEEEEEeC-ChHHHHHHHHHHhcC
Q psy13086 84 QNLLSEYAYVLSEGGIVYTITD-VKDLHDWIVSHFTEH 120 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~d-~~~~~~~~~~~~~~~ 120 (169)
..+++++...|+||..++-.+. .+.....+.+.+.++
T Consensus 85 ~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~ 122 (296)
T 3qha_A 85 REVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKAR 122 (296)
T ss_dssp HHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHc
Confidence 3567888888999887766543 344444455555544
No 450
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=22.66 E-value=2.3e+02 Score=21.36 Aligned_cols=92 Identities=8% Similarity=0.046 Sum_probs=53.6
Q ss_pred CeEEEEcCccc---ccCcC--CCCcEEEEeCCHHHHHHHHHH-hc---------cccceEEEeCCCCcccccchhhhccc
Q psy13086 19 VEFVDVGCGKL---YLPMF--PSTLILGLEIRVKVSDYVIDE-WS---------LYLKKMFFLYPDPHFKRCKYKWRIIN 83 (169)
Q Consensus 19 ~~iLDiGCG~G---la~~~--p~~~v~GiDis~~~l~~a~~~-~~---------~~~d~v~~~f~d~~f~~~h~~~~~~~ 83 (169)
.+|.=||||.= ++... .+.+|+++|.++..++.+++. +. ...|.|.+..|++.. .
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~----------~ 75 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPH----------V 75 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHH----------H
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHH----------H
Confidence 36888999864 33221 245899999999877766542 11 346666666554320 1
Q ss_pred HHHH---HHHHHhccCCcEEEEEeCC-hHHHHHHHHHHhcC
Q psy13086 84 QNLL---SEYAYVLSEGGIVYTITDV-KDLHDWIVSHFTEH 120 (169)
Q Consensus 84 ~~~l---~~~~rvLkpGG~l~i~~d~-~~~~~~~~~~~~~~ 120 (169)
+.++ +++...|+||..++..+.. +...+.+.+.+..+
T Consensus 76 ~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 76 KEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAK 116 (299)
T ss_dssp HHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred HHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 2344 5666788998877544333 23344455555543
No 451
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=22.54 E-value=83 Score=26.88 Aligned_cols=74 Identities=14% Similarity=-0.000 Sum_probs=45.0
Q ss_pred CCCeEEEEcCccc------ccCcCCCCcEEEEeCCHHHHHHHHHH-h--------ccccceEEEeCCCCcccccchhhhc
Q psy13086 17 KKVEFVDVGCGKL------YLPMFPSTLILGLEIRVKVSDYVIDE-W--------SLYLKKMFFLYPDPHFKRCKYKWRI 81 (169)
Q Consensus 17 ~~~~iLDiGCG~G------la~~~p~~~v~GiDis~~~l~~a~~~-~--------~~~~d~v~~~f~d~~f~~~h~~~~~ 81 (169)
.+.+|+=+|+|.= .++.+ +.+|+++|.++.-++.|++. + -...|.+...-+.+ .+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atgt~---------~~ 342 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNK---------DI 342 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSSSS---------CS
T ss_pred CcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCCCH---------HH
Confidence 3678999998642 22333 46999999999876666532 1 03455554433222 11
Q ss_pred ccHHHHHHHHHhccCCcEEEEEe
Q psy13086 82 INQNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 82 ~~~~~l~~~~rvLkpGG~l~i~~ 104 (169)
+. .+..+.|||||+++...
T Consensus 343 i~----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 343 IM----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp BC----HHHHHHSCTTCEEEECS
T ss_pred HH----HHHHHhcCCCcEEEEeC
Confidence 12 24556789999998764
No 452
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=22.50 E-value=2e+02 Score=19.94 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=26.1
Q ss_pred CCeEEEEcCcc-c--ccCcC--C-CCcEEEEeCCHHHHHHHHH
Q psy13086 18 KVEFVDVGCGK-L--YLPMF--P-STLILGLEIRVKVSDYVID 54 (169)
Q Consensus 18 ~~~iLDiGCG~-G--la~~~--p-~~~v~GiDis~~~l~~a~~ 54 (169)
+.+|+=+|||. | +++.. . +..|+++|.++.-++.+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~ 81 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS 81 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH
Confidence 45788899875 3 33322 2 5689999999987776654
No 453
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=22.39 E-value=3e+02 Score=21.99 Aligned_cols=51 Identities=10% Similarity=0.091 Sum_probs=32.4
Q ss_pred CeEEEEcCcc-c------ccC---c----CCCCcEEEE-eCCHHHHHHHHHHhc--------------cccceEEEeCCC
Q psy13086 19 VEFVDVGCGK-L------YLP---M----FPSTLILGL-EIRVKVSDYVIDEWS--------------LYLKKMFFLYPD 69 (169)
Q Consensus 19 ~~iLDiGCG~-G------la~---~----~p~~~v~Gi-Dis~~~l~~a~~~~~--------------~~~d~v~~~f~d 69 (169)
-+|-=||||. | ++. . .++.+++|| |.++...+.+.++.. ..+|.|.+.-|+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~ 106 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPN 106 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCc
Confidence 5788899986 3 111 1 124577765 999987776655432 468888775554
No 454
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=21.66 E-value=1.9e+02 Score=22.25 Aligned_cols=83 Identities=7% Similarity=0.037 Sum_probs=44.8
Q ss_pred CCCCeEEEEc-Ccc-c-----ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCCCc-cccc----chhhhccc
Q psy13086 16 EKKVEFVDVG-CGK-L-----YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPDPH-FKRC----KYKWRIIN 83 (169)
Q Consensus 16 ~~~~~iLDiG-CG~-G-----la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d~~-f~~~----h~~~~~~~ 83 (169)
.++.+||=+| +|. | +++.. ++++++++ +..-++.+++- ..|.+ +.+.++. +... ...-..+.
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~l---Ga~~~-i~~~~~~~~~~~~~g~D~v~d~~g 224 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKAL---GAEQC-INYHEEDFLLAISTPVDAVIDLVG 224 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHH---TCSEE-EETTTSCHHHHCCSCEEEEEESSC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHc---CCCEE-EeCCCcchhhhhccCCCEEEECCC
Confidence 3467898887 432 3 44443 56899998 55446666542 12222 2232221 1100 00000012
Q ss_pred HHHHHHHHHhccCCcEEEEEe
Q psy13086 84 QNLLSEYAYVLSEGGIVYTIT 104 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i~~ 104 (169)
...+....+.|++||+++...
T Consensus 225 ~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 225 GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp HHHHHHHGGGEEEEEEEEECC
T ss_pred cHHHHHHHHhccCCCEEEEeC
Confidence 344588999999999998764
No 455
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=20.71 E-value=97 Score=24.05 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=16.5
Q ss_pred HHHHHHHHHhccCCcEEEE
Q psy13086 84 QNLLSEYAYVLSEGGIVYT 102 (169)
Q Consensus 84 ~~~l~~~~rvLkpGG~l~i 102 (169)
...++.+...|+|||.+++
T Consensus 197 ~~~le~~~p~l~~GGvIv~ 215 (257)
T 3tos_A 197 KAVLEAIRPYLTKGSIVAF 215 (257)
T ss_dssp HHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHHhCCCcEEEE
Confidence 4578899999999999987
No 456
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=20.14 E-value=2.9e+02 Score=20.91 Aligned_cols=92 Identities=12% Similarity=0.114 Sum_probs=54.6
Q ss_pred CeEEEEcCccc---ccCcC--CCCcEEEEeCCHHHHHHHHHH-hc---------cccceEEEeCCCCcccccchhhhccc
Q psy13086 19 VEFVDVGCGKL---YLPMF--PSTLILGLEIRVKVSDYVIDE-WS---------LYLKKMFFLYPDPHFKRCKYKWRIIN 83 (169)
Q Consensus 19 ~~iLDiGCG~G---la~~~--p~~~v~GiDis~~~l~~a~~~-~~---------~~~d~v~~~f~d~~f~~~h~~~~~~~ 83 (169)
.+|.=||||.= ++... .+.+|+++|.++..++.+.+. +. ...|.|.+..|++.. .
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~----------~ 73 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQH----------V 73 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHH----------H
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHH----------H
Confidence 56888999863 33321 246899999999877766542 11 456777776665420 1
Q ss_pred HHHHH---HHHHhccCCcEEEEEeC-ChHHHHHHHHHHhcC
Q psy13086 84 QNLLS---EYAYVLSEGGIVYTITD-VKDLHDWIVSHFTEH 120 (169)
Q Consensus 84 ~~~l~---~~~rvLkpGG~l~i~~d-~~~~~~~~~~~~~~~ 120 (169)
..++. ++...+++|..++-.+. .+.....+.+.+..+
T Consensus 74 ~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~ 114 (302)
T 2h78_A 74 EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARER 114 (302)
T ss_dssp HHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHc
Confidence 34555 56677888877654432 333334445555544
No 457
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=20.00 E-value=50 Score=25.45 Aligned_cols=81 Identities=11% Similarity=0.107 Sum_probs=45.7
Q ss_pred CCCeEEEEcCccc-------ccCcCCCCcEEEEeCCHHHHHHHHHHhccccceEEEeCCC-Ccccc----cchhhhcccH
Q psy13086 17 KKVEFVDVGCGKL-------YLPMFPSTLILGLEIRVKVSDYVIDEWSLYLKKMFFLYPD-PHFKR----CKYKWRIINQ 84 (169)
Q Consensus 17 ~~~~iLDiGCG~G-------la~~~p~~~v~GiDis~~~l~~a~~~~~~~~d~v~~~f~d-~~f~~----~h~~~~~~~~ 84 (169)
++.+||-+|++.| +++.. +++|+++|.++.-++.+++ +. .+.+ +.+.+ +.+.. ....-. ...
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~-~g--a~~~-~~~~~~~~~~~~~~~~d~vid-~g~ 198 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA-LG--AEEA-ATYAEVPERAKAWGGLDLVLE-VRG 198 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH-TT--CSEE-EEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-cC--CCEE-EECCcchhHHHHhcCceEEEE-CCH
Confidence 3688999998444 44443 5699999999887777654 21 1211 11111 00000 000000 011
Q ss_pred HHHHHHHHhccCCcEEEEE
Q psy13086 85 NLLSEYAYVLSEGGIVYTI 103 (169)
Q Consensus 85 ~~l~~~~rvLkpGG~l~i~ 103 (169)
..++...+.|+++|+++..
T Consensus 199 ~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 199 KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp TTHHHHHTTEEEEEEEEEC
T ss_pred HHHHHHHHhhccCCEEEEE
Confidence 3678888999999998764
Done!