RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13090
(771 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 35.4 bits (82), Expect = 7e-04
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 449 QCEYCSQLFRRASAVEKHIALKHTGDKPYSC 479
C+ C + F R + HI HT ++P+ C
Sbjct: 7 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 34.2 bits (79), Expect = 0.002
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 472 TGDKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNI 510
+ KPY C C + F + L H+ +H P+ C +
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 31.5 bits (72), Expect = 0.019
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 568 SLDRKHQCPVCLRRFSRQSDNNTHQRRVHGVLKP 601
S+ + + C C + FSR N H ++VH +P
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERP 34
Score = 30.3 bits (69), Expect = 0.046
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 34 FMCYACYYSTYISTNMKNHI-MTHTGSKPYNC 64
++C +C ++ HI HT +P+ C
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 27.7 bits (62), Expect = 0.50
Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 386 YKCNICDCFFKTHSILEDHMKALHS----FPCD 414
Y C C F L H+K +H+ C
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 26.5 bits (59), Expect = 1.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 505 PYSCNICFRRNSKYTHLSRHKLLVH 529
PY C C + S+ HL+ H VH
Sbjct: 5 PYICQSCGKGFSRPDHLNGHIKQVH 29
Score = 26.1 bits (58), Expect = 1.6
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 541 IGEKYSCTQCSYQTYHKHALDNHM-PLHSLDRKHQCPV 577
+G+ Y C C L+ H+ +H+ +R H+C V
Sbjct: 2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 24.2 bits (53), Expect = 7.1
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 57 TGSKPYNCSHCTFKGASSQALKYHM 81
+ KPY C C + L H+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHI 25
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 34.2 bits (79), Expect = 0.002
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 471 HTGDKPYSCYLCEEKFENSESLRTHMNSLH 500
H+G+KPY CY+C +F S +++ H+ H
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 31.1 bits (71), Expect = 0.026
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 55 THTGSKPYNCSHCTFKGASSQALKYHM 81
TH+G KPY C C + S +K H+
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHI 28
Score = 30.0 bits (68), Expect = 0.058
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 567 HSLDRKHQCPVCLRRFSRQSDNNTHQRRVHG 597
HS ++ ++C +C RF++ H + H
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHT 33
Score = 26.1 bits (58), Expect = 1.6
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 505 PYSCNICFRRNSKYTHLSRHKLLVHQKQI 533
PY C IC R ++ + H L H + +
Sbjct: 8 PYECYICHARFTQSGTMKMHILQKHTENV 36
Score = 25.7 bits (57), Expect = 2.0
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 386 YKCNICDCFFKTHSILEDHMKALHS 410
Y+C IC F ++ H+ H+
Sbjct: 9 YECYICHARFTQSGTMKMHILQKHT 33
Score = 25.3 bits (56), Expect = 3.4
Identities = 6/31 (19%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 713 EQTFMCTQCDFTSSSKDTLNTHAM-VHADEL 742
E+ + C C + T+ H + H + +
Sbjct: 6 EKPYECYICHARFTQSGTMKMHILQKHTENV 36
Score = 24.2 bits (53), Expect = 7.7
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTG 58
R H + + CY C+ S MK HI+
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 33.0 bits (76), Expect = 0.005
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 471 HTGDKPYSCYLCEEKFENSESLRTHM 496
H+G+KPY C C + F S L H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQ 27
Score = 29.5 bits (67), Expect = 0.077
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 56 HTGSKPYNCSHCTFKGASSQALKYHM 81
H+G KPY C C + S L H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQ 27
Score = 27.2 bits (61), Expect = 0.59
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 567 HSLDRKHQCPVCLRRFSRQSDNNTHQR 593
HS ++ + C C + FSR S HQR
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQR 28
Score = 26.8 bits (60), Expect = 0.84
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 542 GEK-YSCTQCSYQTYHKHALDNHMPLHS 568
GEK Y C +C L H +H+
Sbjct: 4 GEKPYGCVECGKAFSRSSILVQHQRVHT 31
Score = 26.4 bits (59), Expect = 1.1
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 27 IHPHKDKFMCYACYYSTYISTNMKNHIMTHTG 58
IH + + C C + S+ + H HTG
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 25.7 bits (57), Expect = 2.2
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 713 EQTFMCTQCDFTSSSKDTLNTHAMVHADE 741
E+ + C +C S L H VH E
Sbjct: 5 EKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 24.5 bits (54), Expect = 5.7
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 505 PYSCNICFRRNSKYTHLSRHK 525
PY C C + S+ + L +H+
Sbjct: 7 PYGCVECGKAFSRSSILVQHQ 27
Score = 24.5 bits (54), Expect = 5.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 386 YKCNICDCFFKTHSILEDHMK 406
Y C C F SIL H +
Sbjct: 8 YGCVECGKAFSRSSILVQHQR 28
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 32.7 bits (74), Expect = 0.010
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 545 YSCTQCSYQTYHKHALDNHMPLHSLDRKHQCPVCLRRFSRQSDNNTHQR 593
Y C QC HK D HM +H R + C VC ++F + H +
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
Score = 30.0 bits (67), Expect = 0.089
Identities = 12/46 (26%), Positives = 15/46 (32%)
Query: 664 CGFRLKNHKQLKLHQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH 709
CG + Q H HL + C C + K HM H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 28.9 bits (64), Expect = 0.28
Identities = 14/46 (30%), Positives = 18/46 (39%)
Query: 636 CDRVFQTDKQWKLHMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYH 681
C + F Q HM H R C +CG + K L H + H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 27.0 bits (59), Expect = 1.3
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 474 DKPYSCYLCEEKFENSESLRTHMNSLHALLFPYSCNICFRRNSKYTHLSRHK 525
DK Y C C + F + HM+ H L PY C +C ++ HL H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSM-HLGLRPYGCGVCGKKFKMKHHLVGHM 50
Score = 26.6 bits (58), Expect = 1.8
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 687 FRCEKCNLGYSRKDSFEYHMTSHNQKEQTFMCTQCDFTSSSKDTLNTHAMVH 738
+ C+ C ++ K + HM+ + + + C C K L H +H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 25.0 bits (54), Expect = 6.0
Identities = 12/51 (23%), Positives = 13/51 (25%), Gaps = 4/51 (7%)
Query: 386 YKCNICDCFFKTHSILEDHMKALHSFPCDKCDYVG---GNLSMLTSHQNSH 433
Y C C F S + HM C G L H H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId:
9606]}
Length = 38
Score = 31.7 bits (72), Expect = 0.016
Identities = 6/30 (20%), Positives = 8/30 (26%)
Query: 52 HIMTHTGSKPYNCSHCTFKGASSQALKYHM 81
+ Y C C + S L H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHR 32
Score = 30.5 bits (69), Expect = 0.044
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 471 HTGDKPYSCYLCEEKFENSESLRTHM 496
+ Y C C + F +S L H
Sbjct: 7 QRERRRYKCDECGKSFSHSSDLSKHR 32
Score = 27.0 bits (60), Expect = 0.71
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTG 58
+ ++ C C S S+++ H THTG
Sbjct: 5 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 26.3 bits (58), Expect = 1.6
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 563 HMPLHSLDRKHQCPVCLRRFSRQSDNNTHQR 593
R+++C C + FS SD + H+R
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33
Score = 25.5 bits (56), Expect = 2.6
Identities = 5/33 (15%), Positives = 12/33 (36%)
Query: 677 HQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH 709
+ ++C++C +S H +H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 24.7 bits (54), Expect = 6.0
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 649 HMGFHNTKRRLPCKLCGFRLKNHKQLKLHQRYH 681
+RR C CG + L H+R H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 31.6 bits (72), Expect = 0.017
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 471 HTGDKPYSCYLCEEKFENSESLRTHM 496
HTG+KPY+C C++ F + L H
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHF 28
Score = 30.0 bits (68), Expect = 0.057
Identities = 14/27 (51%), Positives = 14/27 (51%)
Query: 55 THTGSKPYNCSHCTFKGASSQALKYHM 81
THTG KPY CSHC Q L H
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHF 28
Score = 26.6 bits (59), Expect = 0.97
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 713 EQTFMCTQCDFTSSSKDTLNTHAMVHADE 741
E+ + C+ CD T K L+ H + D
Sbjct: 6 EKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 26.6 bits (59), Expect = 1.00
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 567 HSLDRKHQCPVCLRRFSRQSDNNTHQRRVHG 597
H+ ++ + C C + F ++ + H +R H
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 26.2 bits (58), Expect = 1.6
Identities = 5/35 (14%), Positives = 10/35 (28%)
Query: 26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTGSK 60
R H + + C C + + H +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 24.6 bits (54), Expect = 5.7
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 542 GEK-YSCTQCSYQTYHKHALDNHMPLHS 568
GEK Y+C+ C K LD H +
Sbjct: 5 GEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 23.9 bits (52), Expect = 9.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 386 YKCNICDCFFKTHSILEDHMK 406
Y C+ CD F+ +L+ H K
Sbjct: 9 YACSHCDKTFRQKQLLDMHFK 29
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 31.6 bits (72), Expect = 0.017
Identities = 11/35 (31%), Positives = 13/35 (37%)
Query: 52 HIMTHTGSKPYNCSHCTFKGASSQALKYHMHVDML 86
TG KP+ C C + S L H ML
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 30.5 bits (69), Expect = 0.043
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 471 HTGDKPYSCYLCEEKFENSESLRTHM 496
TG KP+ C C+ F S+ L H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHR 31
Score = 25.8 bits (57), Expect = 2.2
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 563 HMPLHSLDRKHQCPVCLRRFSRQSDNNTHQR 593
+ + QCP C R FSR H++
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 25.1 bits (55), Expect = 4.4
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 677 HQRYHLSSNLFRCEKCNLGYSRKDSFEYHMTSH 709
R F+C C+ +SR D H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 23.9 bits (52), Expect = 9.2
Identities = 8/33 (24%), Positives = 10/33 (30%)
Query: 26 RIHPHKDKFMCYACYYSTYISTNMKNHIMTHTG 58
R F C C S S ++ H H
Sbjct: 4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 28.9 bits (65), Expect = 0.14
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 34 FMC--YACYYSTYISTNMKNHIMTHTGSKPYNC 64
F C AC S ++K H+ H+ ++ Y C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 25.8 bits (57), Expect = 1.7
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 450 CEYCSQLFRRASAVEKHIALKHTGDKPYSC 479
C + F +++H+ L H+ + Y C
Sbjct: 6 EPACGKSFNFKKHLKEHMKL-HSDTRDYIC 34
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 29.0 bits (65), Expect = 0.18
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 471 HTGDKPYSCYLCEEKFENSESLRTHM 496
+G +P+ C +C F + H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHL 27
Score = 28.6 bits (64), Expect = 0.21
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 56 HTGSKPYNCSHCTFKGASSQALKYHMHV 83
+G +P+ C C + H+ V
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKV 29
Score = 24.3 bits (53), Expect = 6.0
Identities = 6/28 (21%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 542 GEK-YSCTQCSYQTYHKHALDNHMPLHS 568
G++ + C C K H+ +H+
Sbjct: 4 GKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 24.3 bits (53), Expect = 6.6
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 713 EQTFMCTQCDFTSSSKDTLNTHAMVHADEL 742
++ F+C C ++K H VH D L
Sbjct: 5 KRPFVCRICLSAFTTKANCARHLKVHTDTL 34
>d2ia7a1 d.373.1.1 (A:23-133) Uncharacterized protein GSU0986
{Geobacter sulfurreducens [TaxId: 35554]}
Length = 111
Score = 29.9 bits (67), Expect = 0.37
Identities = 8/78 (10%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Query: 45 ISTNMKNHIMTHTGSKPYN-CSHCTFKGASSQALKYHMHVDMLQYLYGASFDRFPHLSND 103
I+ +++ + T G + C + + + A P +
Sbjct: 11 IAESIRIILGTARGERVMRPDFGCGIHDRVFSVINTTTLGLIENEVKEALILWEPRIELL 70
Query: 104 D-DDDDDDGDDGDVKFDV 120
+ +G + D+
Sbjct: 71 SVTASPREAAEGRLLIDI 88
>d2ghfa1 g.37.1.1 (A:45-102) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 28.3 bits (63), Expect = 0.49
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 715 TFMCTQCDFTSSSKDTLNTH-AMVHADELKFSCQ 747
+++C +C+F + D L+ H H E F
Sbjct: 6 SYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT 39
Score = 27.2 bits (60), Expect = 1.3
Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 5/33 (15%)
Query: 291 FNCKQCSFTTKTPKKFIEHKEAGH-----FTWN 318
+ C +C+F TK EH H F
Sbjct: 7 YVCVECNFLTKRYDALSEHNLKYHPGEENFKLT 39
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 26.9 bits (60), Expect = 0.78
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 34 FMCYACYYSTYISTNMKNHIMTHTGSK 60
F C C S ++ HI TH K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 24.6 bits (54), Expect = 5.0
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 505 PYSCNICFRRNSKYTHLSRHK 525
++C C +R + HLS+H
Sbjct: 2 KFACPECPKRFMRSDHLSKHI 22
Score = 24.6 bits (54), Expect = 5.4
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 475 KPYSCYLCEEKFENSESLRTHM 496
K ++C C ++F S+ L H+
Sbjct: 1 KKFACPECPKRFMRSDHLSKHI 22
Score = 24.2 bits (53), Expect = 7.2
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 573 HQCPVCLRRFSRQSDNNTHQR 593
CP C +RF R + H +
Sbjct: 3 FACPECPKRFMRSDHLSKHIK 23
Score = 23.8 bits (52), Expect = 9.8
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 545 YSCTQCSYQTYHKHALDNHMPLHS 568
++C +C + L H+ H
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQ 26
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 27.7 bits (62), Expect = 0.91
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 630 QLTCDICDRVFQTDKQWKLHMGFHNTKRRL 659
C C R F K H + K+RL
Sbjct: 15 LHRCLACARYFIDSTNLKTHFRSKDHKKRL 44
Score = 25.0 bits (55), Expect = 7.4
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 386 YKCNICDCFFKTHSILEDHMK 406
++C C +F + L+ H +
Sbjct: 16 HRCLACARYFIDSTNLKTHFR 36
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 26.0 bits (58), Expect = 1.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 571 RKHQCPVCLRRFSRQSDNNTHQR 593
R C VC R F+RQ H R
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR 23
Score = 25.3 bits (56), Expect = 2.7
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 34 FMCYACYYSTYISTNMKNHIMTHTGSK 60
F+C C + ++K H +HT K
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 24.5 bits (54), Expect = 5.1
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 505 PYSCNICFRRNSKYTHLSRHK 525
+ C +C R ++ HL RH
Sbjct: 2 SFVCEVCTRAFARQEHLKRHY 22
Score = 24.1 bits (53), Expect = 6.2
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 475 KPYSCYLCEEKFENSESLRTHM 496
+ + C +C F E L+ H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY 22
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 25.5 bits (55), Expect = 2.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 60 KPYNCSHCTFKGASSQALKYHMHV 83
KPY C C + A S +L H+ +
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRI 25
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 25.9 bits (56), Expect = 2.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 475 KPYSCYLCEEKFENSESLRTHMNSLHA 501
K Y C CE + +S +L+TH+ + H+
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHS 27
Score = 25.1 bits (54), Expect = 3.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 60 KPYNCSHCTFKGASSQALKYHM 81
K Y C +C F+ A S LK H+
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHI 22
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 25.4 bits (55), Expect = 2.6
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 450 CEYCSQLFRRASAVEKHIALKHTGDKPYS 478
CE C ++FR + +H L H+G+KPYS
Sbjct: 8 CEICGKIFRDVYHLNRH-KLSHSGEKPYS 35
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 25.0 bits (54), Expect = 3.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 572 KHQCPVCLRRFSRQSDNNTHQRRVH 596
K CP C +R+SD H R+ H
Sbjct: 2 KFHCPHCDTVIARKSDLGVHLRKQH 26
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 25.0 bits (54), Expect = 3.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 687 FRCEKCNLGYSRKDSFEYHMTSHN 710
+ C C L + RKD YH+ SH+
Sbjct: 4 YSCPVCGLRFKRKDRMSYHVRSHD 27
Score = 24.2 bits (52), Expect = 6.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 474 DKPYSCYLCEEKFENSESLRTHMNS 498
+KPYSC +C +F+ + + H+ S
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRS 25
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 25.1 bits (54), Expect = 4.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 472 TGDKPYSCYLCEEKFENSESLRTHMNS 498
TG KPY C +C ++F +S H+ S
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHVTS 27
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 25.5 bits (55), Expect = 4.4
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 470 KHTGDKPYSCYLCEEKFENSESLRTHMNSLH 500
+ ++P +C +C S +LR H+ H
Sbjct: 18 RSQSEQPATCPICYAVIRQSRNLRRHLELRH 48
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 24.5 bits (54), Expect = 4.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 475 KPYSCYLCEEKFENSESLRTHM 496
KP+ C +C F S+ L TH+
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI 23
Score = 24.5 bits (54), Expect = 5.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 573 HQCPVCLRRFSRQSDNNTHQR 593
QC +C+R FSR TH R
Sbjct: 4 FQCRICMRNFSRSDHLTTHIR 24
Score = 24.1 bits (53), Expect = 7.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 505 PYSCNICFRRNSKYTHLSRHK 525
P+ C IC R S+ HL+ H
Sbjct: 3 PFQCRICMRNFSRSDHLTTHI 23
Score = 23.7 bits (52), Expect = 8.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 34 FMCYACYYSTYISTNMKNHIMTHTG 58
F C C + S ++ HI THTG
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 25.3 bits (55), Expect = 4.9
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 469 LKHTGDKPYSCYLCEE--KFENSESLRTHM 496
+K DK + C F+ ++R+H+
Sbjct: 11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHI 40
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 24.4 bits (53), Expect = 6.0
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 574 QCPVCLRRFSRQSDNNTHQRRVHG 597
C +C R F+R+ H +++H
Sbjct: 3 PCGLCNRAFTRRDLLIRHAQKIHS 26
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 121
Score = 26.3 bits (58), Expect = 6.4
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 479 CYLCEEKFENSESLRTHMNSLH 500
C C+ F ++E +H H
Sbjct: 18 CLFCDRLFASAEETFSHCKLEH 39
>d1qkla_ a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 9606]}
Length = 127
Score = 26.3 bits (58), Expect = 6.8
Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 100 LSNDDDDDDDDGDDGDVKFDVCNGIINKIENTCSEHNDRIFYANIKREHLDPDDCPKYKM 159
+S+++D+ D D D + + + + N E + + +R + M
Sbjct: 1 MSDNEDNFDGDDFDDVEEDEGLDDLENAEEE---GQENVEILPSGERPQANQKRITTPYM 57
Query: 160 TR 161
T+
Sbjct: 58 TK 59
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 24.2 bits (52), Expect = 7.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 656 KRRLPCKLCGFRLKNHKQLKLHQRYH 681
+R C++C + +N QL +H R H
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSH 26
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 24.3 bits (52), Expect = 7.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 688 RCEKCNLGYSRKDSFEYHMTSH 709
+CE C +SRKD + HM H
Sbjct: 3 KCEVCGKCFSRKDKLKTHMRCH 24
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 23.8 bits (51), Expect = 7.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 573 HQCPVCLRRFSRQSDNNTHQRRVH 596
+ CP C + F+R+ + H + +H
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIH 25
>d1wg4a_ d.58.7.1 (A:) Splicing factor, arginine/serine-rich 9
(SFRS9) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 98
Score = 25.9 bits (56), Expect = 8.0
Identities = 8/48 (16%), Positives = 11/48 (22%)
Query: 364 LSPDLQKEELVRETRSMKMYDNYKCNICDCFFKTHSILEDHMKALHSF 411
L P ++L R + ED AL
Sbjct: 23 LPPSGSWQDLKDHMREAGDVCYADVQKDGMGMVEYLRKEDMEYALRKL 70
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 24.3 bits (53), Expect = 8.4
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 475 KPYSCYLCEEKFENSESLRTHMNS 498
+ Y+C C+ +F ++++L HMN
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNV 27
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.134 0.432
Gapped
Lambda K H
0.267 0.0700 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,958,835
Number of extensions: 145754
Number of successful extensions: 950
Number of sequences better than 10.0: 1
Number of HSP's gapped: 930
Number of HSP's successfully gapped: 237
Length of query: 771
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 679
Effective length of database: 1,144,436
Effective search space: 777072044
Effective search space used: 777072044
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (25.8 bits)