RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13093
(111 letters)
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 78.7 bits (193), Expect = 2e-20
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGKTCL+ +T FP T+ D V ++G+ + L +WDTAGQE + +
Sbjct: 15 GVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSY 74
Query: 60 YPQT 63
Y
Sbjct: 75 YRSA 78
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 78.3 bits (192), Expect = 3e-20
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+CLL+ + + F +I T+ ++ V ++GK + L +WDTAGQE + +
Sbjct: 12 GVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAY 71
Query: 60 YPQT 63
Y
Sbjct: 72 YRGA 75
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 78.4 bits (192), Expect = 6e-20
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+CLL+ ++ + + +YI T+ ++ V +DGK + L +WDTAGQE + +
Sbjct: 16 GVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSY 75
Query: 60 YPQT 63
Y +
Sbjct: 76 YRGS 79
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 74.8 bits (183), Expect = 8e-19
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGKTC+L ++ +AF +I T+ ++ + +DGK I L +WDTAGQE + +
Sbjct: 16 GVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 75
Query: 60 YPQT 63
Y
Sbjct: 76 YRGA 79
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 66.8 bits (162), Expect = 7e-16
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
+VGKT L Y ++F ++ TV ++ + + K I L +WDTAGQE Y +
Sbjct: 15 SVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAY 74
Query: 60 YPQT 63
Y
Sbjct: 75 YRGA 78
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 65.3 bits (158), Expect = 4e-15
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+ LL+ +T + F E T+ D + VDG L +WDTAGQE + L P
Sbjct: 17 GVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSY 76
Query: 60 YPQTW 64
Y
Sbjct: 77 YRGAQ 81
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 64.9 bits (157), Expect = 6e-15
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV-----------DGKPINLGLWDTAGQ 49
VGKT L YT N F ++I TV ++ +V ++L LWDTAGQ
Sbjct: 15 GVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQ 74
Query: 50 EDYDRLRPLSYPQT 63
E + L +
Sbjct: 75 ERFRSLTTAFFRDA 88
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 61.5 bits (148), Expect = 9e-14
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
GK+CLL + F + T+ + S + V GK + L +WDTAGQE + +
Sbjct: 15 GTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSY 74
Query: 60 YPQT 63
Y
Sbjct: 75 YRGA 78
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 60.7 bits (146), Expect = 2e-13
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 1 AVGKTCLLISYTTNAF-PGEYIPTVFDNY-SANVMVDGKPINLGLWDTAGQEDYDRLRPL 58
VGKTCLL+ + AF G +I TV ++ + + VDG + L +WDTAGQE + +
Sbjct: 16 GVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHA 75
Query: 59 SYPQT 63
Y
Sbjct: 76 YYRDA 80
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 59.6 bits (143), Expect = 6e-13
Identities = 51/63 (80%), Positives = 56/63 (88%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
AVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAGQEDYDRLRPLSY
Sbjct: 13 AVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSY 72
Query: 61 PQT 63
PQT
Sbjct: 73 PQT 75
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 58.7 bits (141), Expect = 1e-12
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFD-NYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+ LL +T N F E T+ + ++ VDGK I +WDTAGQE Y R+
Sbjct: 14 GVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAY 73
Query: 60 YPQ 62
Y
Sbjct: 74 YRG 76
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 58.0 bits (139), Expect = 2e-12
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+CLL +T F + T+ + + + V G+ I L +WDTAGQE + +
Sbjct: 14 GVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSY 73
Query: 60 YPQT 63
Y
Sbjct: 74 YRGA 77
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 56.6 bits (135), Expect = 7e-12
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
A GKTCLLI + + FP Y+PTVF+NY A++ VDGK + L LWDTAG EDYDRLRPLSY
Sbjct: 12 ACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDRLRPLSY 71
Query: 61 PQTW 64
P T
Sbjct: 72 PDTD 75
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 55.4 bits (132), Expect = 2e-11
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
+VGKT L+ + ++F Y T+ D S + ++ + I L LWDTAGQE + L P
Sbjct: 10 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSY 69
Query: 60 YPQ 62
Sbjct: 70 IRD 72
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 52.6 bits (125), Expect = 2e-10
Identities = 22/64 (34%), Positives = 31/64 (48%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L + + T F +Y PT+ D Y + VD P L + DTAG E + +R L
Sbjct: 13 GVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYI 72
Query: 61 PQTW 64
Sbjct: 73 KNGQ 76
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 52.2 bits (124), Expect = 3e-10
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANV-MVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+CLL+ +T F + T+ + A + +DGK I L +WDTAGQE + +
Sbjct: 13 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSY 72
Query: 60 YPQT 63
Y
Sbjct: 73 YRGA 76
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 52.3 bits (124), Expect = 3e-10
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQEDYDRLRPLS 59
VGK+ L+ Y TN F + T+ + + VDG + + +WDTAGQE + LR
Sbjct: 16 GVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPF 75
Query: 60 YPQ 62
Y
Sbjct: 76 YRG 78
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 51.2 bits (121), Expect = 6e-10
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
AVGK+ L++ + F T+ + V +D + +WDTAGQE Y L P+
Sbjct: 16 AVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMY 75
Query: 60 YPQT 63
Y
Sbjct: 76 YRGA 79
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 50.4 bits (119), Expect = 2e-09
Identities = 62/64 (96%), Positives = 63/64 (98%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP+NLGLWDTAGQEDYDRLRPLSY
Sbjct: 15 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSY 74
Query: 61 PQTW 64
PQT
Sbjct: 75 PQTD 78
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 50.4 bits (119), Expect = 2e-09
Identities = 45/62 (72%), Positives = 52/62 (83%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
AVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+DTAGQEDYDRLRPLSY
Sbjct: 19 AVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSY 78
Query: 61 PQ 62
P
Sbjct: 79 PM 80
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 48.8 bits (115), Expect = 6e-09
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L I N F EY PT+ D+Y V++DG+ L + DTAGQE+Y +R
Sbjct: 13 GVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYM 72
Query: 61 PQ 62
Sbjct: 73 RT 74
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 48.9 bits (115), Expect = 7e-09
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT LL + + FP Y+PTVF+NY+A+ +D + I L LWDT+G YD +RPLSY
Sbjct: 12 QCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSY 71
Query: 61 PQT 63
P +
Sbjct: 72 PDS 74
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 48.1 bits (113), Expect = 1e-08
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L I + + F +Y PT+ D+Y+ VDG P L + DTAGQE++ +R
Sbjct: 16 GVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYM 75
Query: 61 PQTW 64
Sbjct: 76 RAGH 79
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 184
Score = 48.2 bits (113), Expect = 1e-08
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV-DGKPINLGLWDTAGQEDY 52
VGKT L+ Y F +Y T+ ++ ++ D + + + +WDTAGQE +
Sbjct: 12 GVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 64
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 47.6 bits (112), Expect = 2e-08
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGKT L++ Y N F ++I T+ ++ + + GK +NL +WDTAGQE + L P+
Sbjct: 13 CVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIY 72
Query: 60 YPQ 62
Y
Sbjct: 73 YRD 75
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 47.0 bits (110), Expect = 3e-08
Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSAN--VMVDGKPINLGLWDTAGQEDYDRLRPL 58
VGKT L+ Y + + +Y T+ ++ + K + +WDTAGQE + L
Sbjct: 12 GVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGV- 70
Query: 59 SYPQTWSLRSFALHAGHPVRFPRGRKIRIMQM 90
++ + + F + R +
Sbjct: 71 AFYRGADCCVLVYDVTNASSFENIKSWRDEFL 102
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 46.6 bits (109), Expect = 3e-08
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L I + F +Y PT+ D+Y + +D + L + DTAGQE++ +R
Sbjct: 14 GVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYM 73
Query: 61 PQT 63
Sbjct: 74 RTG 76
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 46.6 bits (109), Expect = 4e-08
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG-KPINLGLWDTAGQEDYDRLRPLS 59
AVGK+ +++ + +N F PT+ + + + +WDTAGQE + L P+
Sbjct: 13 AVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMY 72
Query: 60 YPQ 62
Y
Sbjct: 73 YRN 75
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 46.1 bits (108), Expect = 6e-08
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L + + F +Y PT+ D+Y V VD + L + DTAG E + +R L
Sbjct: 13 GVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYM 72
Query: 61 PQ 62
Sbjct: 73 KN 74
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 45.5 bits (106), Expect = 8e-08
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRP 57
+VGK+ L I + F Y PT+ + ++ + V+G+ +L L DTAGQ++Y
Sbjct: 14 SVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEYSIFPQ 70
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 45.4 bits (106), Expect = 1e-07
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLG-LWDTAGQEDYDRLRPLS 59
VGK+ ++ + ++F PT+ ++ + ++ +WDTAG E + L P+
Sbjct: 14 GVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGLERFRALAPMY 73
Query: 60 YPQ 62
Y
Sbjct: 74 YRG 76
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 45.4 bits (106), Expect = 1e-07
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLW 44
VGK+ L++ + T F EY PT+ Y +D + +++ +
Sbjct: 12 GVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEIL 55
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 45.0 bits (105), Expect = 1e-07
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDN-YSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
VGKTCL + FP T+ + V +DG+ I + LWDTAGQE + +
Sbjct: 12 NVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQH 71
Query: 60 Y 60
Y
Sbjct: 72 Y 72
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 44.5 bits (104), Expect = 2e-07
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L + + + F +Y PT D+Y V++DG+ + + + DTAGQEDY +R +
Sbjct: 14 GVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYF 73
Query: 61 PQT 63
Sbjct: 74 RSG 76
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 42.8 bits (99), Expect = 8e-07
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDTAGQEDYDRLRPLS 59
AVGK+ ++ Y F +Y T+ ++ + V+ + + L LWDTAGQE++D +
Sbjct: 12 AVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAY 71
Query: 60 YPQ 62
Y
Sbjct: 72 YRG 74
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 43.0 bits (100), Expect = 9e-07
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRP 57
VGK+ L++ + F YIPTV D Y + D L + DT G + ++
Sbjct: 12 GVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQR 68
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 42.7 bits (99), Expect = 1e-06
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRP 57
VGK+ L I + + F +Y PT+ D+Y+ ++D + L + DTAGQE++ +R
Sbjct: 15 GVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMRE 71
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 42.3 bits (98), Expect = 1e-06
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
A GKT +L E + T+ V+ K I+ +WD GQ+ L +
Sbjct: 10 AAGKTTILYKLKLG----EIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF 65
Query: 61 PQTW 64
T
Sbjct: 66 QNTQ 69
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 41.6 bits (96), Expect = 3e-06
Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
GKT + + T F +Y+ T+ + + + PI +WDTAGQE + LR
Sbjct: 13 GTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGY 72
Query: 60 YPQTWSLRSFALHAGHPVRFPRGRKIRIMQMIGF 93
Y Q R + +
Sbjct: 73 YIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE 106
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 41.5 bits (96), Expect = 4e-06
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 1/91 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT L + T + + ++ D+ + + + + +L L D G E +
Sbjct: 10 DSGKTLLFVRLLTGQYR-DTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRFQLLDRF 68
Query: 61 PQTWSLRSFALHAGHPVRFPRGRKIRIMQMI 91
+ F + + R + + Q++
Sbjct: 69 KSSARAVVFVVDSAAFQREVKDVAEFLYQVL 99
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 38.8 bits (89), Expect = 3e-05
Identities = 10/75 (13%), Positives = 20/75 (26%), Gaps = 5/75 (6%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GK+ + +PT D + + + D GQ R +
Sbjct: 12 ESGKSTFIKQMRIIHG--SGVPTTGIIE---YPFDLQSVIFRMVDVGGQRSERRKWIHCF 66
Query: 61 PQTWSLRSFALHAGH 75
S+ + +
Sbjct: 67 ENVTSIMFLVALSEY 81
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 38.4 bits (88), Expect = 4e-05
Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTA 47
GK+ L+ + T ++ T + Y ++VDG+ + + + A
Sbjct: 15 RSGKSSLIHRFLTGSYQ-VLEKTESEQYKKEMLVDGQTHLVLIREEA 60
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 36.5 bits (83), Expect = 2e-04
Identities = 8/64 (12%), Positives = 17/64 (26%), Gaps = 8/64 (12%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GK+ ++ G I K ++ ++D GQ + +
Sbjct: 12 ESGKSTIVKQMKIIHEAGTGIVE--------THFTFKDLHFKMFDVGGQRSERKKWIHCF 63
Query: 61 PQTW 64
Sbjct: 64 EGVT 67
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 35.3 bits (80), Expect = 6e-04
Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT +L PT+ N + K + L +WD GQ Y
Sbjct: 27 GAGKTTILYRLQIGEVV-TTKPTIGFNV---ETLSYKNLKLNVWDLGGQTSIRPYWRCYY 82
Query: 61 PQTWSL 66
T ++
Sbjct: 83 ADTAAV 88
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 35.1 bits (80), Expect = 7e-04
Identities = 10/91 (10%), Positives = 25/91 (27%), Gaps = 9/91 (9%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLS 59
GK+ ++ + T +N ++D GQ D R
Sbjct: 16 ESGKSTIVKQMRIL----HVVLTSGIFETK----FQVDKVNFHMFDVGGQRDERRKWIQC 67
Query: 60 YPQTWSLRSFALHAGHPVRFPRGRKIRIMQM 90
+ ++ + + + + +Q
Sbjct: 68 FNDVTAIIFVVASSSYNMVIREDNQTNRLQE 98
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 34.3 bits (77), Expect = 0.001
Identities = 13/103 (12%), Positives = 24/103 (23%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT + + F + IPTV N + +
Sbjct: 12 YSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGV 71
Query: 61 PQTWSLRSFALHAGHPVRFPRGRKIRIMQMIGFRDRLLWGSKQ 103
+ A + + L+ G+K+
Sbjct: 72 SAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKR 114
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 33.9 bits (76), Expect = 0.001
Identities = 14/99 (14%), Positives = 28/99 (28%), Gaps = 1/99 (1%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
VGK+ L + G Y +++VDG+ +L ++D Q+ L
Sbjct: 11 GVGKSALARIFGGVED-GPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLPGHCM 69
Query: 61 PQTWSLRSFALHAGHPVRFPRGRKIRIMQMIGFRDRLLW 99
+ ++ D +
Sbjct: 70 AMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPI 108
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 33.4 bits (75), Expect = 0.003
Identities = 15/64 (23%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
A GKT +L F+ V K + +WD GQ+ L Y
Sbjct: 22 AAGKTTILYKLKLGQSVTTIPTVGFNVE----TVTYKNVKFNVWDVGGQDKIRPLWRHYY 77
Query: 61 PQTW 64
T
Sbjct: 78 TGTQ 81
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 32.9 bits (74), Expect = 0.004
Identities = 10/75 (13%), Positives = 19/75 (25%), Gaps = 6/75 (8%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GK+ L PT + + K + + D GQ + +
Sbjct: 12 ESGKSTFLKQMR---IIHGQDPTKGIHE---YDFEIKNVPFKMVDVGGQRSERKRWFECF 65
Query: 61 PQTWSLRSFALHAGH 75
S+ +
Sbjct: 66 DSVTSILFLVSSSEF 80
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 32.0 bits (71), Expect = 0.007
Identities = 13/64 (20%), Positives = 18/64 (28%), Gaps = 4/64 (6%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT LL + PT + I +D G RL +
Sbjct: 10 NAGKTTLLHMLKNDRLA-TLQPTWHPTS---EELAIGNIKFTTFDLGGHIQARRLWKDYF 65
Query: 61 PQTW 64
P+
Sbjct: 66 PEVN 69
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 30.5 bits (67), Expect = 0.024
Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 2/92 (2%)
Query: 1 AVGKTCLLISYTTN--AFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPL 58
VGK+ L + + + D Y +MVDG+ + L D + +
Sbjct: 13 GVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENKGENEWLHD 72
Query: 59 SYPQTWSLRSFALHAGHPVRFPRGRKIRIMQM 90
Q F + ++RI
Sbjct: 73 HCMQVGDAYLIVYSITDRASFEKASELRIQLR 104
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 29.6 bits (65), Expect = 0.049
Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 4/64 (6%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT +L ++ N E + T S + +WD GQE Y
Sbjct: 25 NAGKTTILYQFSMN----EVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYY 80
Query: 61 PQTW 64
T
Sbjct: 81 TNTE 84
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 29.7 bits (65), Expect = 0.055
Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 4/54 (7%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDR 54
GKT +L E + T+ V K + +WD G
Sbjct: 15 GAGKTTILYRLQVG----EVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIRP 64
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 28.1 bits (61), Expect = 0.15
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDY 52
GKT +L + PT+ N ++ + L +WD GQ+
Sbjct: 12 NAGKTTILKKFNGEDVD-TISPTLGFNI---KTLEHRGFKLNIWDVGGQKSL 59
>d2di8a1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 25.7 bits (56), Expect = 0.69
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y PTV Y + + +
Sbjct: 62 SYFPTVPGVYIVSTKFADEHV 82
>d2bp3a1 b.1.18.10 (A:1863-1954) Filamin a {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 25.7 bits (56), Expect = 0.70
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y+P + +YS V + + +
Sbjct: 61 SYLPVLPGDYSILVKYNEQHV 81
>d2j3sa2 b.1.18.10 (A:2149-2236) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 88
Score = 25.6 bits (56), Expect = 0.71
Identities = 3/21 (14%), Positives = 10/21 (47%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
++P ++ +V G+ +
Sbjct: 53 RFVPAEMGTHTVSVKYKGQHV 73
>d2diaa1 b.1.18.10 (A:8-107) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 25.3 bits (55), Expect = 1.0
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y+P Y+ + G+ +
Sbjct: 64 TYVPLTAGMYTLTMKYGGELV 84
>d2diba1 b.1.18.10 (A:8-122) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 115
Score = 25.7 bits (56), Expect = 1.1
Identities = 7/21 (33%), Positives = 8/21 (38%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
EY P + V D PI
Sbjct: 79 EYTPFEKGLHVVEVTYDDVPI 99
>d2dica1 b.1.18.10 (A:8-105) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 25.3 bits (55), Expect = 1.2
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
EYIP +Y N+ G I
Sbjct: 62 EYIPFAPGDYDVNITYGGAHI 82
>d2d7na1 b.1.18.10 (A:8-87) Filamin C {Human (Homo sapiens)
[TaxId: 9606]}
Length = 80
Score = 24.8 bits (54), Expect = 1.4
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y PT + + DG I
Sbjct: 44 RYAPTEKGLHQMGIKYDGNHI 64
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 25.7 bits (55), Expect = 1.4
Identities = 19/115 (16%), Positives = 35/115 (30%), Gaps = 9/115 (7%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSY 60
GKT LL + F+ V + L +WD G + R SY
Sbjct: 26 NAGKTTLLKQLASEDISHITPTQGFNIK----SVQSQGFKLNVWDI-GGQRKIRPYWRSY 80
Query: 61 PQTWSLRSFALHAGHPVRFPRGRKIRIMQMIGFRDR----LLWGSKQAREEKNEK 111
+ + + + + RF + + + L++ +KQ
Sbjct: 81 FENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPA 135
>d1qfha1 b.1.18.10 (A:646-749) F-actin cross-linking gelation
factor (ABP-120) repeats {Dictyostelium discoideum
[TaxId: 44689]}
Length = 104
Score = 25.0 bits (54), Expect = 1.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y V NY+ NV + G PI
Sbjct: 73 VYDAPVEGNYNVNVTLRGNPI 93
>d2w0pa1 b.1.18.10 (A:2237-2328) Filamin a {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 24.5 bits (53), Expect = 1.9
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y+ +Y +V + + I
Sbjct: 60 AYVVQEPGDYEVSVKFNEEHI 80
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 25.0 bits (53), Expect = 2.4
Identities = 5/29 (17%), Positives = 7/29 (24%)
Query: 1 AVGKTCLLISYTTNAFPGEYIPTVFDNYS 29
GKT LL + +
Sbjct: 23 NAGKTTLLHMLKDDRLGQHVPTLHPTSEE 51
>d1v05a_ b.1.18.10 (A:) Filamin C {Human (Homo sapiens) [TaxId:
9606]}
Length = 96
Score = 23.8 bits (51), Expect = 3.2
Identities = 3/21 (14%), Positives = 6/21 (28%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y +Y V + +
Sbjct: 66 TYTVKEKGDYILIVKWGDESV 86
>d2dmba1 b.1.18.10 (A:8-118) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 111
Score = 24.2 bits (52), Expect = 3.4
Identities = 5/21 (23%), Positives = 5/21 (23%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y Y V G I
Sbjct: 65 FYTAAKPGTYVIYVRFGGVDI 85
>d2di9a1 b.1.18.10 (A:8-125) Filamin b {Human (Homo sapiens) [TaxId:
9606]}
Length = 118
Score = 24.2 bits (52), Expect = 3.7
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y+PT Y N++ + I
Sbjct: 82 SYLPTKPGEYFVNILFEEVHI 102
>d1fvia1 b.40.4.6 (A:190-293) ATP-dependent DNA ligase {Chlorella
virus PBCV-1 [TaxId: 10506]}
Length = 104
Score = 23.7 bits (51), Expect = 4.0
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 35 DGKPINLGLWDTAGQ-EDYDRLRPLSYPQTWSLRSFALHAGHPVRFPRGRKIR 86
DG ++G A Q D+ + + + + F + + RFP IR
Sbjct: 52 DGVVFSIGTGFDADQRRDFWQNKESYIGKMVKFKYFEMGSKDCPRFPVFIGIR 104
>d2d7ma1 b.1.18.10 (A:8-109) Filamin C {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 23.4 bits (50), Expect = 5.4
Identities = 5/21 (23%), Positives = 9/21 (42%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y+P + Y+ + G I
Sbjct: 66 SYLPDMSGRYTITIKYGGDEI 86
>d2dmca1 b.1.18.10 (A:8-110) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 23.3 bits (50), Expect = 6.1
Identities = 3/21 (14%), Positives = 9/21 (42%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
+IP + ++ +G +
Sbjct: 67 SFIPREVGEHLVSIKKNGNHV 87
>d1wlha1 b.1.18.10 (A:547-647) F-actin cross-linking gelation
factor (ABP-120) repeats {Dictyostelium discoideum
[TaxId: 44689]}
Length = 101
Score = 23.1 bits (49), Expect = 6.6
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
E+ P +Y N+ +DG +
Sbjct: 70 EFEPKEAGDYVINLTLDGDNV 90
>d2dj4a1 b.1.18.10 (A:8-108) Filamin b {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 23.0 bits (49), Expect = 7.2
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 19 EYIPTVFDNYSANVMVDGKPI 39
Y P+ Y +V + I
Sbjct: 65 TYTPSQEGPYMVSVKYADEEI 85
>d2h85a2 d.294.1.2 (A:191-345) Nsp15, C-terminal domain {SARS
coronavirus [TaxId: 227859]}
Length = 155
Score = 23.2 bits (50), Expect = 7.7
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 31 NVMVDGKPINLGLW--DTAGQEDYDRL 55
V +D I+ LW D + Y +L
Sbjct: 129 KVTIDYAEISFMLWCKDGHVETFYPKL 155
>d1tiea_ b.42.4.1 (A:) Erythrina cafra trypsin inhibitor
{Erythrina caffra [TaxId: 3842]}
Length = 170
Score = 23.3 bits (50), Expect = 8.9
Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 8/64 (12%)
Query: 34 VDGKPINLG--------LWDTAGQEDYDRLRPLSYPQTWSLRSFALHAGHPVRFPRGRKI 85
+G+ + G +W G + + P T L G P+R +
Sbjct: 5 GNGEVVQNGGTYYLLPQVWAQGGGVQLAKTGEETCPLTVVQSPNELSDGKPIRIESRLRS 64
Query: 86 RIMQ 89
+
Sbjct: 65 AFIP 68
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.139 0.440
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 436,268
Number of extensions: 18700
Number of successful extensions: 125
Number of sequences better than 10.0: 1
Number of HSP's gapped: 110
Number of HSP's successfully gapped: 76
Length of query: 111
Length of database: 2,407,596
Length adjustment: 70
Effective length of query: 41
Effective length of database: 1,446,496
Effective search space: 59306336
Effective search space used: 59306336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.5 bits)