BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy13096
ENTRTPGGAAGTSVKPTKYHYYPHNQHIYLLPECAVQQENTRTPGGAAGTSVKPTKYHYY
PHNQHIYLLPECAVQQVCNAVYVRLNYTQPLCACPSRYREPCSASINSDDFHTTELTTDP
QGKVLTLVKTCEPVLDMRLCRSPRDWSLLALQNIRTGKSHYLVICRCPDSSILEGPMSHD
QPTYASVPGIRVYGMMCVNRAASVVSTTASVYHTSSTTYRTPTPSKRKSRPLRLSRSVRV
SRRK

High Scoring Gene Products

Symbol, full name Information P value
dsx-c73A
doublesex cognate 73A 		protein from Drosophila melanogaster 1.2e-67

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy13096
        (244 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0261799 - symbol:dsx-c73A "doublesex cognate 73A" ...   687  1.2e-67   1


>FB|FBgn0261799 [details] [associations]
            symbol:dsx-c73A "doublesex cognate 73A" species:7227
            "Drosophila melanogaster" [GO:0005214 "structural constituent of
            chitin-based cuticle" evidence=IC] [GO:0040003 "chitin-based
            cuticle development" evidence=IEP] [GO:0005576 "extracellular
            region" evidence=IDA] GO:GO:0005576 EMBL:AE014296 GO:GO:0040003
            GO:GO:0005214 EMBL:AY071185 RefSeq:NP_730169.1 UniGene:Dm.7771
            SMR:Q9VV62 MINT:MINT-755439 EnsemblMetazoa:FBtr0075409 GeneID:39831
            KEGG:dme:Dmel_CG32159 UCSC:CG32159-RB CTD:39831 FlyBase:FBgn0261799
            eggNOG:NOG47748 InParanoid:Q9VV62 OMA:CEATTEM OrthoDB:EOG4NCJWG
            GenomeRNAi:39831 NextBio:815614 Uniprot:Q9VV62
        Length = 852

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 121/154 (78%), Positives = 133/154 (86%)

Query:    51 SVKPTKYHYYPHNQHIYLLPECAVQQVCNAVYVRLNYTQPLCACPSRYREPCSASINSDD 110
             + KPTKYHYYPHNQHIYLLPECA+QQVCNAVYVRLNYTQPLCACPSRYR+PCSAS+N DD
Sbjct:   493 TAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPSRYRDPCSASLNEDD 552

Query:   111 FHTTELTTDPQGKVLTLVKTCEPVLDMRLCRSPRDWSLLALQNIRTGKSHYLVICRCPDS 170
              HTT+L  D + K +TL KTCE   +MR CRSP+DWSLLALQN RTGKSHYLVICRCPD 
Sbjct:   553 QHTTKLVGDTKKKAITLAKTCEATTEMRECRSPKDWSLLALQNTRTGKSHYLVICRCPDH 612

Query:   171 SILEGPMSHDQPTYASVPGIRVYGMMCVNRAASV 204
               +EGPM+HDQPTYASVPGIRV+GMMCV    SV
Sbjct:   613 FKMEGPMAHDQPTYASVPGIRVFGMMCVKPGYSV 646

 Score = 143 (55.4 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 23/26 (88%), Positives = 25/26 (96%)

Query:    13 SVKPTKYHYYPHNQHIYLLPECAVQQ 38
             + KPTKYHYYPHNQHIYLLPECA+QQ
Sbjct:   493 TAKPTKYHYYPHNQHIYLLPECAIQQ 518


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      244       214   0.00085  112 3  11 22  0.37    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  193 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.50u 0.11s 18.61t   Elapsed:  00:00:01
  Total cpu time:  18.50u 0.11s 18.61t   Elapsed:  00:00:01
  Start:  Thu Aug 15 16:43:10 2013   End:  Thu Aug 15 16:43:11 2013

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