Your job contains 1 sequence.
>psy13118
MHKYLHYRQHCLKHSVGVARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLS
KNHRQPYAVSKDAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPT
RIWRRWHRKVNVNQRRYAMVSAIAASSVPALVMSKGHQTSAESWGTGRAVARIPRVRGGG
THRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYAMVSAIAASSVPALVMSKGHM
IQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWNDVLKVQSSGTF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13118
(286 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5ZII1 - symbol:RPL4 "Uncharacterized protein" ... 629 1.6e-61 1
UNIPROTKB|F1SJJ5 - symbol:RPL4 "60S ribosomal protein L4"... 624 5.5e-61 1
UNIPROTKB|Q58DW0 - symbol:RPL4 "60S ribosomal protein L4"... 624 5.5e-61 1
UNIPROTKB|E2R546 - symbol:RPL4 "60S ribosomal protein L4"... 624 5.5e-61 1
UNIPROTKB|F1PVZ2 - symbol:RPL4 "60S ribosomal protein L4"... 624 5.5e-61 1
UNIPROTKB|J9JHV8 - symbol:RPL4 "60S ribosomal protein L4"... 624 5.5e-61 1
UNIPROTKB|P36578 - symbol:RPL4 "60S ribosomal protein L4"... 624 5.5e-61 1
UNIPROTKB|Q6P3V9 - symbol:Rpl4 "Ribosomal protein L4" spe... 624 5.5e-61 1
MGI|MGI:1915141 - symbol:Rpl4 "ribosomal protein L4" spec... 624 5.5e-61 1
RGD|619824 - symbol:Rpl4 "ribosomal protein L4" species:1... 623 7.1e-61 1
ZFIN|ZDB-GENE-030131-9034 - symbol:rpl4 "ribosomal protei... 618 2.4e-60 1
UNIPROTKB|Q28346 - symbol:RPL4 "60S ribosomal protein L4"... 617 3.1e-60 1
UNIPROTKB|H3BTP7 - symbol:RPL4 "60S ribosomal protein L4"... 609 2.2e-59 1
FB|FBgn0003279 - symbol:RpL4 "Ribosomal protein L4" speci... 606 4.5e-59 1
UNIPROTKB|J9P0P0 - symbol:J9P0P0 "Uncharacterized protein... 597 4.0e-58 1
UNIPROTKB|G3MXR5 - symbol:G3MXR5 "Uncharacterized protein... 594 8.4e-58 1
UNIPROTKB|Q6EE59 - symbol:RPL4 "Ribosomal protein L4" spe... 574 1.1e-55 1
TAIR|locus:2151296 - symbol:AT5G02870 species:3702 "Arabi... 555 1.1e-53 1
TAIR|locus:2074904 - symbol:AT3G09630 species:3702 "Arabi... 551 3.0e-53 1
POMBASE|SPBP8B7.03c - symbol:rpl402 "60S ribosomal protei... 534 1.9e-51 1
POMBASE|SPBC1711.06 - symbol:rpl401 "60S ribosomal protei... 531 4.0e-51 1
ASPGD|ASPL0000011665 - symbol:AN8176 species:162425 "Emer... 527 1.1e-50 1
UNIPROTKB|H3BU31 - symbol:RPL4 "60S ribosomal protein L4"... 523 2.8e-50 1
DICTYBASE|DDB_G0277803 - symbol:rpl4 "60S ribosomal prote... 516 1.5e-49 1
UNIPROTKB|G4MZ86 - symbol:MGG_08190 "60S ribosomal protei... 510 6.7e-49 1
WB|WBGene00004415 - symbol:rpl-4 species:6239 "Caenorhabd... 509 8.5e-49 1
SGD|S000000235 - symbol:RPL4A "Ribosomal 60S subunit prot... 497 1.6e-47 1
SGD|S000002419 - symbol:RPL4B "Ribosomal 60S subunit prot... 497 1.6e-47 1
CGD|CAL0003773 - symbol:RPL4B species:5476 "Candida albic... 491 6.9e-47 1
UNIPROTKB|Q59ZX4 - symbol:RPL4B "Likely cytosolic ribosom... 491 6.9e-47 1
GENEDB_PFALCIPARUM|PFE0350c - symbol:PFE0350c "60S riboso... 471 9.1e-45 1
UNIPROTKB|Q8I431 - symbol:PFE0350c "60S ribosomal protein... 471 9.1e-45 1
UNIPROTKB|H3BM89 - symbol:RPL4 "Ribosomal protein L4, iso... 353 2.9e-32 1
>UNIPROTKB|Q5ZII1 [details] [associations]
symbol:RPL4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 CTD:6124 HOVERGEN:HBG001453
OrthoDB:EOG483D4X EMBL:AADN02038915 EMBL:AJ720803 IPI:IPI00575596
RefSeq:NP_001007480.1 UniGene:Gga.4523 SMR:Q5ZII1 STRING:Q5ZII1
Ensembl:ENSGALT00000012495 GeneID:415551 KEGG:gga:415551
InParanoid:Q5ZII1 OMA:PEDKKSA NextBio:20819134 Uniprot:Q5ZII1
Length = 421
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 116/140 (82%), Positives = 130/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPDVVNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGEASGKNVTLPAVFKAPIRPDVVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VNV Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 97/128 (75%), Positives = 115/128 (89%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VNV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I+++PE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEIPELPLVVEDKVESYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|F1SJJ5 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:CU407297
Ensembl:ENSSSCT00000005457 Uniprot:F1SJJ5
Length = 426
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 114/140 (81%), Positives = 129/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 97/128 (75%), Positives = 114/128 (89%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I++VPE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVESYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|Q58DW0 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:BT021487 EMBL:BC102521
IPI:IPI00699827 RefSeq:NP_001014894.1 UniGene:Bt.48893
ProteinModelPortal:Q58DW0 SMR:Q58DW0 STRING:Q58DW0 PRIDE:Q58DW0
Ensembl:ENSBTAT00000006866 GeneID:510547 KEGG:bta:510547 CTD:6124
HOVERGEN:HBG001453 InParanoid:Q58DW0 OrthoDB:EOG483D4X
NextBio:20869503 Uniprot:Q58DW0
Length = 422
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 114/140 (81%), Positives = 129/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 97/128 (75%), Positives = 114/128 (89%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I++VPE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|E2R546 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:AAEX03016228
Ensembl:ENSCAFT00000008039 Uniprot:E2R546
Length = 412
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 114/140 (81%), Positives = 129/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 97/128 (75%), Positives = 114/128 (89%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I++VPE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|F1PVZ2 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:AAEX03016228
ProteinModelPortal:F1PVZ2 Ensembl:ENSCAFT00000027421 Uniprot:F1PVZ2
Length = 422
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 114/140 (81%), Positives = 129/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 97/128 (75%), Positives = 114/128 (89%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I++VPE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|J9JHV8 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 OMA:HRRVNIT EMBL:AAEX03015186
RefSeq:XP_003640018.1 Ensembl:ENSCAFT00000018127 GeneID:100856765
KEGG:cfa:100856765 Uniprot:J9JHV8
Length = 422
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 114/140 (81%), Positives = 129/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 97/128 (75%), Positives = 114/128 (89%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I++VPE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|P36578 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 EMBL:CH471082
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 CTD:6124
HOVERGEN:HBG001453 OrthoDB:EOG483D4X ChiTaRS:RPL4 EMBL:L20868
EMBL:D23660 EMBL:AB061820 EMBL:AK291117 EMBL:AK291859 EMBL:BC001365
EMBL:BC005817 EMBL:BC007748 EMBL:BC007996 EMBL:BC009888
EMBL:BC010151 EMBL:BC014653 EMBL:BC066925 EMBL:BC095427
IPI:IPI00003918 PIR:T09551 RefSeq:NP_000959.2 UniGene:Hs.186350
UniGene:Hs.644628 ProteinModelPortal:P36578 SMR:P36578
DIP:DIP-27559N IntAct:P36578 MINT:MINT-1034893 STRING:P36578
PhosphoSite:P36578 DMDM:22002063 SWISS-2DPAGE:P36578 PaxDb:P36578
PRIDE:P36578 DNASU:6124 Ensembl:ENST00000307961 GeneID:6124
KEGG:hsa:6124 UCSC:uc002apv.3 GeneCards:GC15M066790 HGNC:HGNC:10353
HPA:HPA034600 MIM:180479 neXtProt:NX_P36578 PharmGKB:PA34749
InParanoid:P36578 PhylomeDB:P36578 GenomeRNAi:6124 NextBio:23787
PMAP-CutDB:P36578 ArrayExpress:P36578 Bgee:P36578 CleanEx:HS_RPL4
Genevestigator:P36578 GermOnline:ENSG00000174444 Uniprot:P36578
Length = 427
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 114/140 (81%), Positives = 129/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 97/128 (75%), Positives = 114/128 (89%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I++VPE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|Q6P3V9 [details] [associations]
symbol:Rpl4 "Ribosomal protein L4" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 RGD:619824
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:CH473975
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 HOVERGEN:HBG001453 IPI:IPI00202512
UniGene:Rn.1133 EMBL:BC063811 EMBL:BC081801 SMR:Q6P3V9
STRING:Q6P3V9 Ensembl:ENSRNOT00000013461 InParanoid:Q6P3V9
Genevestigator:Q6P3V9 Uniprot:Q6P3V9
Length = 421
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 114/140 (81%), Positives = 129/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 96/128 (75%), Positives = 113/128 (88%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH +++VPE PLVV DK++ YKKTK+A L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRVEEVPELPLVVEDKVESYKKTKEAVQLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>MGI|MGI:1915141 [details] [associations]
symbol:Rpl4 "ribosomal protein L4" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 MGI:MGI:1915141
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0030529
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 CTD:6124 HOVERGEN:HBG001453
OrthoDB:EOG483D4X ChiTaRS:RPL4 EMBL:AK008098 EMBL:AK011068
EMBL:BC003459 IPI:IPI00111412 RefSeq:NP_077174.1 UniGene:Mm.280083
ProteinModelPortal:Q9D8E6 SMR:Q9D8E6 IntAct:Q9D8E6
MINT:MINT-1859608 STRING:Q9D8E6 PhosphoSite:Q9D8E6 PaxDb:Q9D8E6
PRIDE:Q9D8E6 Ensembl:ENSMUST00000034966 GeneID:67891 KEGG:mmu:67891
InParanoid:Q9D8E6 NextBio:325862 Bgee:Q9D8E6 CleanEx:MM_RPL4
Genevestigator:Q9D8E6 GermOnline:ENSMUSG00000032399 Uniprot:Q9D8E6
Length = 419
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 114/140 (81%), Positives = 129/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 97/128 (75%), Positives = 113/128 (88%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I++VPE PLVV DK++ YKKTK+A L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVQLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>RGD|619824 [details] [associations]
symbol:Rpl4 "ribosomal protein L4" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 RGD:619824 GO:GO:0005730
GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 GO:GO:0022625
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 CTD:6124
HOVERGEN:HBG001453 OrthoDB:EOG483D4X EMBL:X82180 IPI:IPI00202512
PIR:JC4277 RefSeq:NP_071955.1 UniGene:Rn.1133
ProteinModelPortal:P50878 SMR:P50878 IntAct:P50878 STRING:P50878
PhosphoSite:P50878 PRIDE:P50878 GeneID:64302 KEGG:rno:64302
UCSC:RGD:619824 InParanoid:P50878 NextBio:612934
ArrayExpress:P50878 Genevestigator:P50878
GermOnline:ENSRNOG00000009378 Uniprot:P50878
Length = 421
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 114/139 (82%), Positives = 128/139 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGH 157
+ SA+AAS++PALVMSKGH
Sbjct: 124 ICSALAASALPALVMSKGH 142
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 96/128 (75%), Positives = 113/128 (88%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH +++VPE PLVV DK++ YKKTK+A L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHCVEEVPELPLVVEDKVESYKKTKEAVQLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>ZFIN|ZDB-GENE-030131-9034 [details] [associations]
symbol:rpl4 "ribosomal protein L4" species:7955
"Danio rerio" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 ZFIN:ZDB-GENE-030131-9034 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
Pfam:PF14374 GeneTree:ENSGT00390000018145 CTD:6124
HOVERGEN:HBG001453 EMBL:CT863714 EMBL:BX927065 EMBL:BC049520
EMBL:BC067580 IPI:IPI00505526 RefSeq:NP_998272.1 UniGene:Dr.35139
SMR:Q7ZW95 STRING:Q7ZW95 Ensembl:ENSDART00000060363 GeneID:337090
KEGG:dre:337090 InParanoid:Q7ZW95 NextBio:20812054 Uniprot:Q7ZW95
Length = 375
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 111/140 (79%), Positives = 129/140 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ V +P+VF+APIRPD+VNFVH N+ KN RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGETSGKNVVMPAVFRAPIRPDIVNFVHTNMRKNKRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VNVNQ+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVNQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
M SA+AAS++P+LVM+KGH+
Sbjct: 124 MCSALAASALPSLVMAKGHR 143
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 97/128 (75%), Positives = 116/128 (90%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VNVN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVN 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYAM SA+AAS++P+LVM+KGH I+++PE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAMCSALAASALPSLVMAKGHRIEEIPEVPLVVDDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|Q28346 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166 PDB:2ZKR
PDBsum:2ZKR HOGENOM:HOG000107331 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 HOVERGEN:HBG001453
EMBL:X99909 ProteinModelPortal:Q28346 SMR:Q28346 STRING:Q28346
PRIDE:Q28346 InParanoid:Q28346 EvolutionaryTrace:Q28346
Uniprot:Q28346
Length = 421
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 113/140 (80%), Positives = 127/140 (90%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+A S+PALVMSKGH+
Sbjct: 124 ICSALACLSLPALVMSKGHR 143
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 96/128 (75%), Positives = 112/128 (87%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+A S+PALVMSKGH I++VPE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALACLSLPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|H3BTP7 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.40.1370.10 SUPFAM:SSF52166 ChiTaRS:RPL4 HGNC:HGNC:10353
EMBL:AC116913 Ensembl:ENST00000569438 Bgee:H3BTP7 Uniprot:H3BTP7
Length = 170
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 112/137 (81%), Positives = 126/137 (91%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSK 155
+ SA+AAS++PALVMSK
Sbjct: 124 ICSALAASALPALVMSK 140
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 87/125 (69%), Positives = 101/125 (80%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSK V DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSK-------------VEDKVEGYKKTKEAVLLLKKLKAWN 165
Query: 276 DVLKV 280
D+ KV
Sbjct: 166 DIKKV 170
>FB|FBgn0003279 [details] [associations]
symbol:RpL4 "Ribosomal protein L4" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 EMBL:AE014297
GO:GO:0051298 GO:GO:0005811 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
KO:K02930 OMA:HTNMRKN InterPro:IPR025755 InterPro:IPR013000
Pfam:PF14374 PROSITE:PS00939 GeneTree:ENSGT00390000018145 CTD:6124
EMBL:X13382 EMBL:AY069485 EMBL:X06881 PIR:S02209 RefSeq:NP_524538.2
UniGene:Dm.2104 ProteinModelPortal:P09180 SMR:P09180 IntAct:P09180
MINT:MINT-844904 STRING:P09180 PaxDb:P09180 PRIDE:P09180
EnsemblMetazoa:FBtr0085248 GeneID:43349 KEGG:dme:Dmel_CG5502
FlyBase:FBgn0003279 InParanoid:P09180 OrthoDB:EOG4280H6
PhylomeDB:P09180 ChiTaRS:RPL4 GenomeRNAi:43349 NextBio:833481
Bgee:P09180 GermOnline:CG5502 Uniprot:P09180
Length = 401
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 116/144 (80%), Positives = 129/144 (89%)
Query: 15 SVGVARPLITVYSEKNEPT-GQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDA 73
S+G ARPL++VY+EKNEP + + LP+VFKAPIRPDVVN VHQ L +N+RQ YAVS+ A
Sbjct: 2 SLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELA 61
Query: 74 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 133
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ +RRWHRKVNVN
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVN 121
Query: 134 QRRYAMVSAIAASSVPALVMSKGH 157
QRRYA+VSAIAAS VPALV SKGH
Sbjct: 122 QRRYALVSAIAASGVPALVQSKGH 145
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 115/180 (63%), Positives = 131/180 (72%)
Query: 109 NMCRAGRMFAPTR--IWRRWHRKVNVNQRRYAMVSAIAASSVPALVMSKGHQTSAESWGT 166
N+C AP R + H+ + N R+ VS +A GHQTSAESWGT
Sbjct: 24 NICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELA-----------GHQTSAESWGT 72
Query: 167 GRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYAMVSAIA 226
GRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ +RRWHRKVNVNQRRYA+VSAIA
Sbjct: 73 GRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIA 132
Query: 227 ASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWNDVLKVQSSGTF 286
AS VPALV SKGH+I V EFPLVVSD++Q+ +KTKQA IFL R+K W D+ KV S F
Sbjct: 133 ASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRF 192
>UNIPROTKB|J9P0P0 [details] [associations]
symbol:J9P0P0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:AAEX03014418
Ensembl:ENSCAFT00000016777 OMA:IRENKRA Uniprot:J9P0P0
Length = 422
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 110/140 (78%), Positives = 126/140 (90%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VY EK E +G+ VTLP+VFKAPIRPD+VNFVH NL K++RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYYEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKSNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRG GTHRSGQGAFGNMCR GRMFAPT+ W RWHR+VN Q+RYA
Sbjct: 64 AESWGTGRAVARIPRVRGRGTHRSGQGAFGNMCRGGRMFAPTKTWCRWHRRVNTTQKRYA 123
Query: 139 MVSAIAASSVPALVMSKGHQ 158
+ SA+AAS++PALVMSKGH+
Sbjct: 124 ICSALAASALPALVMSKGHR 143
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 95/128 (74%), Positives = 112/128 (87%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRG GTHRSGQGAFGNMCR GRMFAPT+ W RWHR+VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGRGTHRSGQGAFGNMCRGGRMFAPTKTWCRWHRRVNTT 118
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I++VPE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWN 178
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 179 DIKKVYAS 186
>UNIPROTKB|G3MXR5 [details] [associations]
symbol:G3MXR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.40.1370.10 SUPFAM:SSF52166 InterPro:IPR025755 Pfam:PF14374
GeneTree:ENSGT00390000018145 EMBL:DAAA02048433
Ensembl:ENSBTAT00000000730 OMA:YAICSEL Uniprot:G3MXR5
Length = 436
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 108/144 (75%), Positives = 127/144 (88%)
Query: 15 SVGVARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAG 74
++ ARPLI+VYS+K E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AG
Sbjct: 14 AMACARPLISVYSKKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 73
Query: 75 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQ 134
HQTSAESWGTGRAVARIPRVRGG TH SGQGAFGNMCR GRMFAPT+ W+RWH +VN Q
Sbjct: 74 HQTSAESWGTGRAVARIPRVRGGRTHHSGQGAFGNMCRGGRMFAPTKTWQRWHHRVNTTQ 133
Query: 135 RRYAMVSAIAASSVPALVMSKGHQ 158
+RYA+ S +AAS++PALVMSKGH+
Sbjct: 134 KRYAICSELAASALPALVMSKGHR 157
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 91/128 (71%), Positives = 110/128 (85%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGG TH SGQGAFGNMCR GRMFAPT+ W+RWH +VN
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGRTHHSGQGAFGNMCRGGRMFAPTKTWQRWHHRVNTT 132
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ S +AAS++PALVMSKGH I++VPE PLVV DK++ YKK+K+A + L ++KAWN
Sbjct: 133 QKRYAICSELAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKSKEAVLLLKKLKAWN 192
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 193 DIKKVYAS 200
>UNIPROTKB|Q6EE59 [details] [associations]
symbol:RPL4 "Ribosomal protein L4" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 InterPro:IPR025755 InterPro:IPR013000
Pfam:PF14374 PROSITE:PS00939 GeneTree:ENSGT00390000018145
HOVERGEN:HBG001453 EMBL:AADN02038915 UniGene:Gga.4523 EMBL:AY389964
IPI:IPI00818526 STRING:Q6EE59 Ensembl:ENSGALT00000038315
InParanoid:Q6EE59 Uniprot:Q6EE59
Length = 280
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 105/125 (84%), Positives = 117/125 (93%)
Query: 34 GQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTSAESWGTGRAVARIPR 93
G+ VTLP+VFKAPIRPDVVNFVH NL KN+RQPYAVS+ AGHQTSAESWGTGRAVARIPR
Sbjct: 1 GKNVTLPAVFKAPIRPDVVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPR 60
Query: 94 VRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYAMVSAIAASSVPALVM 153
VRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VNV Q+RYA+ SA+AAS++PALVM
Sbjct: 61 VRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVTQKRYAICSALAASALPALVM 120
Query: 154 SKGHQ 158
SKGH+
Sbjct: 121 SKGHR 125
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 97/128 (75%), Positives = 115/128 (89%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+VNV
Sbjct: 41 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVT 100
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SA+AAS++PALVMSKGH I+++PE PLVV DK++ YKKTK+A + L ++KAWN
Sbjct: 101 QKRYAICSALAASALPALVMSKGHRIEEIPELPLVVEDKVESYKKTKEAVLLLKKLKAWN 160
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 161 DIKKVYAS 168
>TAIR|locus:2151296 [details] [associations]
symbol:AT5G02870 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:AL162973
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 ProtClustDB:PLN00185
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
EMBL:AY054479 EMBL:AY059886 EMBL:AY062452 EMBL:AY093384
EMBL:AY114639 EMBL:AY136320 EMBL:BT002088 EMBL:Z18118 EMBL:Z18460
EMBL:Z17589 IPI:IPI00521292 PIR:T48308 RefSeq:NP_195907.1
UniGene:At.21294 ProteinModelPortal:P49691 SMR:P49691 IntAct:P49691
STRING:P49691 PaxDb:P49691 PRIDE:P49691 ProMEX:P49691
EnsemblPlants:AT5G02870.1 GeneID:831756 KEGG:ath:AT5G02870
GeneFarm:381 TAIR:At5g02870 InParanoid:P49691 OMA:HRRVNIT
PhylomeDB:P49691 Genevestigator:P49691 GermOnline:AT5G02870
Uniprot:P49691
Length = 407
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 104/143 (72%), Positives = 122/143 (85%)
Query: 19 ARPLITVYS-EKNEPTGQ--TVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGH 75
ARPL+TV + + T Q TVTLP V AP+RPD+VNFVH +S N RQPYAVSK AGH
Sbjct: 7 ARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKKAGH 66
Query: 76 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQR 135
QTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCR GRMFAPT+IWRRWHR+VNVN +
Sbjct: 67 QTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNVNMK 126
Query: 136 RYAMVSAIAASSVPALVMSKGHQ 158
R+A+VSAIAA++VPALVM++GH+
Sbjct: 127 RHAIVSAIAATAVPALVMARGHK 149
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 92/139 (66%), Positives = 112/139 (80%)
Query: 146 SSVPALVMSK-GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRI 204
S P V K GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCR GRMFAPT+I
Sbjct: 54 SRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKI 113
Query: 205 WRRWHRKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQA 264
WRRWHR+VNVN +R+A+VSAIAA++VPALVM++GH I++VPE PLVVSD + +KT A
Sbjct: 114 WRRWHRRVNVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAA 173
Query: 265 TIFLHRIKAWNDVLKVQSS 283
L +I A++D K ++S
Sbjct: 174 IKVLKQIGAYDDAEKAKNS 192
>TAIR|locus:2074904 [details] [associations]
symbol:AT3G09630 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0005886 GO:GO:0009506
GO:GO:0005618 GO:GO:0009507 GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0006412 EMBL:AC016661
GO:GO:0003735 GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 EMBL:AY056781 EMBL:BT002438 EMBL:BT008495
IPI:IPI00542248 RefSeq:NP_187574.1 UniGene:At.24636
ProteinModelPortal:Q9SF40 SMR:Q9SF40 IntAct:Q9SF40 STRING:Q9SF40
PaxDb:Q9SF40 PRIDE:Q9SF40 EnsemblPlants:AT3G09630.1 GeneID:820120
KEGG:ath:AT3G09630 GeneFarm:380 TAIR:At3g09630 HOGENOM:HOG000107331
InParanoid:Q9SF40 KO:K02930 OMA:HTNMRKN PhylomeDB:Q9SF40
ProtClustDB:PLN00185 Genevestigator:Q9SF40 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 Uniprot:Q9SF40
Length = 406
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 102/147 (69%), Positives = 123/147 (83%)
Query: 15 SVGVARPLITVYS-EKNEPTGQ--TVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSK 71
+ ARPL+T+ + + + T Q TV LP V AP+RPD+VNFVH +S N RQPYAVSK
Sbjct: 2 AAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSK 61
Query: 72 DAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVN 131
AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCR GRMFAPT+IWRRWHR+VN
Sbjct: 62 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVN 121
Query: 132 VNQRRYAMVSAIAASSVPALVMSKGHQ 158
VN +R+A+VSAIAA++VPALVM++GH+
Sbjct: 122 VNMKRHAIVSAIAATAVPALVMARGHK 148
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 92/139 (66%), Positives = 112/139 (80%)
Query: 146 SSVPALVMSK-GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRI 204
S P V K GHQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCR GRMFAPT+I
Sbjct: 53 SRQPYAVSKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKI 112
Query: 205 WRRWHRKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQA 264
WRRWHR+VNVN +R+A+VSAIAA++VPALVM++GH I++VPE PLVVSD + +KT A
Sbjct: 113 WRRWHRRVNVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAA 172
Query: 265 TIFLHRIKAWNDVLKVQSS 283
L +I A++D K ++S
Sbjct: 173 IKVLKQIGAYDDAEKAKNS 191
>POMBASE|SPBP8B7.03c [details] [associations]
symbol:rpl402 "60S ribosomal protein L4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
PomBase:SPBP8B7.03c EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0022625 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
EMBL:X73146 PIR:S41640 PIR:T40797 RefSeq:NP_596510.1
ProteinModelPortal:P35679 SMR:P35679 IntAct:P35679 STRING:P35679
PRIDE:P35679 EnsemblFungi:SPBP8B7.03c.1 GeneID:2541344
KEGG:spo:SPBP8B7.03c OrthoDB:EOG4GF6PS NextBio:20802453
Uniprot:P35679
Length = 363
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 94/143 (65%), Positives = 120/143 (83%)
Query: 16 VGVARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGH 75
+ ARP +++YS+ + +T+ LP VFKAPIRPD+V VH ++KN RQPYAVS+ AGH
Sbjct: 1 MAAARPTVSIYSKDGSVSSETIALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGH 60
Query: 76 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQR 135
QTSAESWGTGRA+ARIPRV GGGTHRSGQ AFGNMCR+GRMFAPT+ WR+WH KVN N++
Sbjct: 61 QTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQNEK 120
Query: 136 RYAMVSAIAASSVPALVMSKGHQ 158
RYA+ SA+AAS VP+L++++GH+
Sbjct: 121 RYAISSAVAASGVPSLLLARGHR 143
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 91/145 (62%), Positives = 117/145 (80%)
Query: 141 SAIAASS-VPALVMSK-GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRM 198
+A+A + P V K GHQTSAESWGTGRA+ARIPRV GGGTHRSGQ AFGNMCR+GRM
Sbjct: 42 TAVAKNKRQPYAVSEKAGHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRM 101
Query: 199 FAPTRIWRRWHRKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEY 258
FAPT+ WR+WH KVN N++RYA+ SA+AAS VP+L++++GH I+++PE PLVV D +Q +
Sbjct: 102 FAPTKTWRKWHVKVNQNEKRYAISSAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSF 161
Query: 259 KKTKQATIFLHRIKAWNDVLKVQSS 283
+KTK+A L IKA+ DV+KV +S
Sbjct: 162 QKTKEAVALLKEIKAYRDVVKVANS 186
>POMBASE|SPBC1711.06 [details] [associations]
symbol:rpl401 "60S ribosomal protein L4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 PomBase:SPBC1711.06 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 OrthoDB:EOG4GF6PS
RefSeq:NP_595879.1 ProteinModelPortal:Q9P784 SMR:Q9P784
STRING:Q9P784 PRIDE:Q9P784 EnsemblFungi:SPBC1711.06.1
GeneID:2539780 KEGG:spo:SPBC1711.06 OMA:QGARNHP NextBio:20800929
Uniprot:Q9P784
Length = 363
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 93/143 (65%), Positives = 120/143 (83%)
Query: 16 VGVARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGH 75
+ ARP +++Y++ + +T+ LP VFKAPIRPD+V VH ++KN RQPYAVS+ AGH
Sbjct: 1 MAAARPTVSIYNKDGSVSSETLALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGH 60
Query: 76 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQR 135
QTSAESWGTGRA+ARIPRV GGGTHRSGQ AFGNMCR+GRMFAPT+ WR+WH KVN N++
Sbjct: 61 QTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQNEK 120
Query: 136 RYAMVSAIAASSVPALVMSKGHQ 158
RYA+ SA+AAS VP+L++++GH+
Sbjct: 121 RYAIASAVAASGVPSLLLARGHR 143
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 91/145 (62%), Positives = 117/145 (80%)
Query: 141 SAIAASS-VPALVMSK-GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRM 198
+A+A + P V K GHQTSAESWGTGRA+ARIPRV GGGTHRSGQ AFGNMCR+GRM
Sbjct: 42 TAVAKNKRQPYAVSEKAGHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRM 101
Query: 199 FAPTRIWRRWHRKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEY 258
FAPT+ WR+WH KVN N++RYA+ SA+AAS VP+L++++GH I+++PE PLVV D +Q +
Sbjct: 102 FAPTKTWRKWHVKVNQNEKRYAIASAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSF 161
Query: 259 KKTKQATIFLHRIKAWNDVLKVQSS 283
+KTK+A L IKA+ DV+KV +S
Sbjct: 162 QKTKEAVALLKEIKAYRDVIKVANS 186
>ASPGD|ASPL0000011665 [details] [associations]
symbol:AN8176 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
GO:GO:0006412 GO:GO:0005840 EMBL:BN001302 GO:GO:0003735
EMBL:AACD01000141 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
OrthoDB:EOG4GF6PS RefSeq:XP_681445.1 ProteinModelPortal:Q5AU54
SMR:Q5AU54 STRING:Q5AU54 EnsemblFungi:CADANIAT00004216
GeneID:2869238 KEGG:ani:AN8176.2 Uniprot:Q5AU54
Length = 372
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 92/140 (65%), Positives = 118/140 (84%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
+RP +++ S + +PTG T LP+VF +PIRPD+V VH ++KN RQPYAVS+ AG QTS
Sbjct: 3 SRPTVSIASGEGKPTGATCPLPAVFNSPIRPDIVQQVHTGMAKNKRQPYAVSEKAGEQTS 62
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRV GGGTHR+GQ AFGN CR+GRMFAPT++WR+WH+KVN+ QRR+A
Sbjct: 63 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNQCRSGRMFAPTKVWRKWHQKVNLGQRRFA 122
Query: 139 MVSAIAASSVPALVMSKGHQ 158
SA+AASSVP+L+ ++GH+
Sbjct: 123 TASALAASSVPSLLFARGHR 142
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 85/139 (61%), Positives = 103/139 (74%)
Query: 149 PALVMSK-GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRR 207
P V K G QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGN CR+GRMFAPT++WR+
Sbjct: 50 PYAVSEKAGEQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNQCRSGRMFAPTKVWRK 109
Query: 208 WHRKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQE---YKKTKQA 264
WH+KVN+ QRR+A SA+AASSVP+L+ ++GH I +VPE PLVV K E KTK A
Sbjct: 110 WHQKVNLGQRRFATASALAASSVPSLLFARGHRIANVPEVPLVVDSKTFENAAVTKTKAA 169
Query: 265 TIFLHRIKAWNDVLKVQSS 283
L + A +++KV S
Sbjct: 170 VALLQALGAGPELVKVSKS 188
>UNIPROTKB|H3BU31 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.40.1370.10 SUPFAM:SSF52166 InterPro:IPR025755 Pfam:PF14374
ChiTaRS:RPL4 HGNC:HGNC:10353 EMBL:AC116913 Ensembl:ENST00000569696
Bgee:H3BU31 Uniprot:H3BU31
Length = 171
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 95/113 (84%), Positives = 104/113 (92%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPLI+VYSEK E +G+ VTLP+VFKAPIRPD+VNFVH NL KN+RQPYAVS+ AGHQTS
Sbjct: 4 ARPLISVYSEKGESSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTS 63
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVN 131
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+ N
Sbjct: 64 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRKN 116
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 53/58 (91%), Positives = 55/58 (94%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVN 213
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR GRMFAPT+ WRRWHR+ N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRKN 116
>DICTYBASE|DDB_G0277803 [details] [associations]
symbol:rpl4 "60S ribosomal protein L4" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
dictyBase:DDB_G0277803 GO:GO:0005615 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000022 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HSSP:P49626 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
RefSeq:XP_642484.1 ProteinModelPortal:Q54Z69 SMR:Q54Z69
STRING:Q54Z69 PRIDE:Q54Z69 EnsemblProtists:DDB0231241
GeneID:8621195 KEGG:ddi:DDB_G0277803 ProtClustDB:PTZ00428
Uniprot:Q54Z69
Length = 369
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 95/139 (68%), Positives = 114/139 (82%)
Query: 20 RPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTSA 79
RP + V+ +N+ G+ V LP+V PIRPD+VNFVH NL+KN RQ Y + AG QTSA
Sbjct: 4 RPFVQVFDAQNKVVGK-VKLPNVLTTPIRPDLVNFVHTNLNKNARQAYGAAPYAGEQTSA 62
Query: 80 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYAM 139
ESWGTGRAVARIPRV G GTHRSGQGAFGNMCR GRM+ P + WRRW+RKVNVNQ+RYA+
Sbjct: 63 ESWGTGRAVARIPRVPGSGTHRSGQGAFGNMCRGGRMYGPNKTWRRWNRKVNVNQKRYAV 122
Query: 140 VSAIAASSVPALVMSKGHQ 158
VSA+AAS+VPALVM++GH+
Sbjct: 123 VSALAASAVPALVMARGHR 141
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 85/129 (65%), Positives = 103/129 (79%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
G QTSAESWGTGRAVARIPRV G GTHRSGQGAFGNMCR GRM+ P + WRRW+RKVNVN
Sbjct: 57 GEQTSAESWGTGRAVARIPRVPGSGTHRSGQGAFGNMCRGGRMYGPNKTWRRWNRKVNVN 116
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDK-IQEYKKTKQATIFLHRIKAW 274
Q+RYA+VSA+AAS+VPALVM++GH I + E PLV++++ + +KTK A L +I A+
Sbjct: 117 QKRYAVVSALAASAVPALVMARGHRINGINEVPLVIANESVDTLQKTKAAVELLKKINAY 176
Query: 275 NDVLKVQSS 283
DV KV S
Sbjct: 177 ADVTKVIDS 185
>UNIPROTKB|G4MZ86 [details] [associations]
symbol:MGG_08190 "60S ribosomal protein L4-A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0043581 EMBL:CM001232 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
RefSeq:XP_003715166.1 ProteinModelPortal:G4MZ86 SMR:G4MZ86
EnsemblFungi:MGG_08190T0 GeneID:2678306 KEGG:mgr:MGG_08190
Uniprot:G4MZ86
Length = 371
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 90/142 (63%), Positives = 116/142 (81%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
+RP +T+ + +G T +P+VF APIRPD+V VH+ ++KN RQPYAVS+ AGHQTS
Sbjct: 3 SRPTVTIIGADGKASGATHPIPNVFTAPIRPDIVQQVHKGMAKNKRQPYAVSEKAGHQTS 62
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR+GRMFAPT++WR+WH KVN Q+R+A
Sbjct: 63 AESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHIKVNQGQKRFA 122
Query: 139 MVSAIAASSVPALVMSKGHQTS 160
SA+AAS+V L++++GH+ S
Sbjct: 123 TTSALAASAVAPLLLARGHRIS 144
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 80/139 (57%), Positives = 100/139 (71%)
Query: 149 PALVMSK-GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRR 207
P V K GHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR+GRMFAPT++WR+
Sbjct: 50 PYAVSEKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRK 109
Query: 208 WHRKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKI---QEYKKTKQA 264
WH KVN Q+R+A SA+AAS+V L++++GH I ++PE PLV+ KT A
Sbjct: 110 WHIKVNQGQKRFATTSALAASAVAPLLLARGHRISNIPEVPLVIDSAAFSGAALAKTAAA 169
Query: 265 TIFLHRIKAWNDVLKVQSS 283
L+ + A D+ KV+ S
Sbjct: 170 VGLLNAVGAGADLDKVKKS 188
>WB|WBGene00004415 [details] [associations]
symbol:rpl-4 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0032502 "developmental process" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0008340 GO:GO:0009792
GO:GO:0006915 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 EMBL:FO080106 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 PIR:T34031 RefSeq:NP_491416.1
ProteinModelPortal:O02056 SMR:O02056 DIP:DIP-26846N IntAct:O02056
MINT:MINT-1087026 STRING:O02056 PaxDb:O02056 PRIDE:O02056
EnsemblMetazoa:B0041.4.1 EnsemblMetazoa:B0041.4.2 GeneID:172074
KEGG:cel:CELE_B0041.4 UCSC:B0041.4.1 CTD:172074 WormBase:B0041.4
InParanoid:O02056 NextBio:873907 Uniprot:O02056
Length = 345
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 92/139 (66%), Positives = 113/139 (81%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
ARPL+TVY EK E T + LP+VF+ PIRPD+V+F+ + +N RQ +AV+ AG Q S
Sbjct: 3 ARPLVTVYDEKYEATQSQIRLPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAGKQHS 62
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR G MFAP +++RRWHR VN+ Q+RYA
Sbjct: 63 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQKRYA 122
Query: 139 MVSAIAASSVPALVMSKGH 157
+ SAIAAS +PAL+ ++GH
Sbjct: 123 VSSAIAASGIPALLQARGH 141
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 86/128 (67%), Positives = 105/128 (82%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
G Q SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCR G MFAP +++RRWHR VN+
Sbjct: 58 GKQHSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIA 117
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
Q+RYA+ SAIAAS +PAL+ ++GH+I V E PLVVSDK++ ++KTK+A +FL R W
Sbjct: 118 QKRYAVSSAIAASGIPALLQARGHVIDQVAEVPLVVSDKVESFRKTKEAVVFLRRSHLWA 177
Query: 276 DVLKVQSS 283
D+ KV +S
Sbjct: 178 DIEKVYNS 185
>SGD|S000000235 [details] [associations]
symbol:RPL4A "Ribosomal 60S subunit protein L4A" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 SGD:S000000235 EMBL:BK006936 GO:GO:0003723
GO:GO:0003735 GO:GO:0002181 PDB:4B6A PDBsum:4B6A EMBL:X76078
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166 PDB:1K5Y PDB:3IZS
PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:3IZS
PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 OrthoDB:EOG4GF6PS
EMBL:J03195 EMBL:Z35900 PIR:S45887 RefSeq:NP_009587.1
ProteinModelPortal:P10664 SMR:P10664 IntAct:P10664
MINT:MINT-1325639 STRING:P10664 PeptideAtlas:P10664 PRIDE:P10664
EnsemblFungi:YBR031W GeneID:852319 KEGG:sce:YBR031W
GeneTree:ENSGT00390000018145 NextBio:971014 Genevestigator:P10664
GermOnline:YBR031W Uniprot:P10664
Length = 362
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 92/141 (65%), Positives = 116/141 (82%)
Query: 18 VARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQT 77
++RP +TV+S E T + LP+VF APIRPD+V+ V +++KN RQ YAVS+ AGHQT
Sbjct: 1 MSRPQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQT 60
Query: 78 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRY 137
SAESWGTGRAVARIPRV GGGT RSGQGAFGNMCR GRMFAPT+ WR+W+ KVN N++RY
Sbjct: 61 SAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRY 120
Query: 138 AMVSAIAASSVPALVMSKGHQ 158
A SAIAA++V +LV+++GH+
Sbjct: 121 ATASAIAATAVASLVLARGHR 141
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 82/128 (64%), Positives = 103/128 (80%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRV GGGT RSGQGAFGNMCR GRMFAPT+ WR+W+ KVN N
Sbjct: 57 GHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHN 116
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
++RYA SAIAA++V +LV+++GH ++ +PE PLVVS ++ +KTK+A L + A +
Sbjct: 117 EKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHS 176
Query: 276 DVLKVQSS 283
D+LKV S
Sbjct: 177 DLLKVLKS 184
>SGD|S000002419 [details] [associations]
symbol:RPL4B "Ribosomal 60S subunit protein L4B" species:4932
"Saccharomyces cerevisiae" [GO:0005840 "ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0006412 "translation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 SGD:S000002419 EMBL:BK006938
GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:Z48008 EMBL:X95966
RefSeq:NP_010299.3 GeneID:851579 KEGG:sce:YDR016C KO:K11553
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
PDB:1S1I PDBsum:1S1I PDB:2WW9 PDB:2WWA PDBsum:2WW9 PDBsum:2WWA
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 OrthoDB:EOG4GF6PS
GeneTree:ENSGT00390000018145 OMA:HRRVNIT EMBL:Z74308 EMBL:AY558570
EMBL:M22583 PIR:S50993 RefSeq:NP_010295.3 ProteinModelPortal:P49626
SMR:P49626 DIP:DIP-5367N IntAct:P49626 MINT:MINT-572151
STRING:P49626 PaxDb:P49626 PeptideAtlas:P49626 EnsemblFungi:YDR012W
GeneID:851575 KEGG:sce:YDR012W EvolutionaryTrace:P49626
NextBio:969031 Genevestigator:P49626 GermOnline:YDR012W
Uniprot:P49626
Length = 362
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 92/141 (65%), Positives = 116/141 (82%)
Query: 18 VARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQT 77
++RP +TV+S E T + LP+VF APIRPD+V+ V +++KN RQ YAVS+ AGHQT
Sbjct: 1 MSRPQVTVHSLTGEATANALPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQT 60
Query: 78 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRY 137
SAESWGTGRAVARIPRV GGGT RSGQGAFGNMCR GRMFAPT+ WR+W+ KVN N++RY
Sbjct: 61 SAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRY 120
Query: 138 AMVSAIAASSVPALVMSKGHQ 158
A SAIAA++V +LV+++GH+
Sbjct: 121 ATASAIAATAVASLVLARGHR 141
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 82/128 (64%), Positives = 103/128 (80%)
Query: 156 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVN 215
GHQTSAESWGTGRAVARIPRV GGGT RSGQGAFGNMCR GRMFAPT+ WR+W+ KVN N
Sbjct: 57 GHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHN 116
Query: 216 QRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLHRIKAWN 275
++RYA SAIAA++V +LV+++GH ++ +PE PLVVS ++ +KTK+A L + A +
Sbjct: 117 EKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHS 176
Query: 276 DVLKVQSS 283
D+LKV S
Sbjct: 177 DLLKVLKS 184
>CGD|CAL0003773 [details] [associations]
symbol:RPL4B species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 CGD:CAL0003773 GO:GO:0009986
GO:GO:0016020 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000092 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 RefSeq:XP_715018.1
ProteinModelPortal:Q59ZX4 SMR:Q59ZX4 STRING:Q59ZX4 GeneID:3643347
KEGG:cal:CaO19.7217 Uniprot:Q59ZX4
Length = 363
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 91/140 (65%), Positives = 114/140 (81%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
+RP ++V S K E + LP+VF AP+RPD+V+ V ++KN RQ YAV+++AGHQTS
Sbjct: 3 SRPQVSVISVKGEQGSSQLPLPAVFAAPVRPDLVHSVFVRVNKNKRQAYAVAENAGHQTS 62
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRV GGGTHRSGQ AFGNMCR GRMFAPT+ WRRW+ KVN N++RYA
Sbjct: 63 AESWGTGRAVARIPRVGGGGTHRSGQAAFGNMCRGGRMFAPTKTWRRWNVKVNHNEKRYA 122
Query: 139 MVSAIAASSVPALVMSKGHQ 158
SAIAAS+V +LV+++GH+
Sbjct: 123 TASAIAASAVTSLVLARGHR 142
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 85/134 (63%), Positives = 103/134 (76%)
Query: 150 ALVMSKGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWH 209
A+ + GHQTSAESWGTGRAVARIPRV GGGTHRSGQ AFGNMCR GRMFAPT+ WRRW+
Sbjct: 52 AVAENAGHQTSAESWGTGRAVARIPRVGGGGTHRSGQAAFGNMCRGGRMFAPTKTWRRWN 111
Query: 210 RKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLH 269
KVN N++RYA SAIAAS+V +LV+++GH ++ V E PLVVS++ + KTK A L
Sbjct: 112 VKVNHNEKRYATASAIAASAVTSLVLARGHRVEQVKELPLVVSNEFESVTKTKDAVAVLK 171
Query: 270 RIKAWNDVLKVQSS 283
+ A DV+KV S
Sbjct: 172 AVGAHKDVVKVIKS 185
>UNIPROTKB|Q59ZX4 [details] [associations]
symbol:RPL4B "Likely cytosolic ribosomal protein L4"
species:237561 "Candida albicans SC5314" [GO:0009986 "cell surface"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 CGD:CAL0003773
GO:GO:0009986 GO:GO:0016020 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACQ01000092 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 RefSeq:XP_715018.1
ProteinModelPortal:Q59ZX4 SMR:Q59ZX4 STRING:Q59ZX4 GeneID:3643347
KEGG:cal:CaO19.7217 Uniprot:Q59ZX4
Length = 363
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 91/140 (65%), Positives = 114/140 (81%)
Query: 19 ARPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTS 78
+RP ++V S K E + LP+VF AP+RPD+V+ V ++KN RQ YAV+++AGHQTS
Sbjct: 3 SRPQVSVISVKGEQGSSQLPLPAVFAAPVRPDLVHSVFVRVNKNKRQAYAVAENAGHQTS 62
Query: 79 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYA 138
AESWGTGRAVARIPRV GGGTHRSGQ AFGNMCR GRMFAPT+ WRRW+ KVN N++RYA
Sbjct: 63 AESWGTGRAVARIPRVGGGGTHRSGQAAFGNMCRGGRMFAPTKTWRRWNVKVNHNEKRYA 122
Query: 139 MVSAIAASSVPALVMSKGHQ 158
SAIAAS+V +LV+++GH+
Sbjct: 123 TASAIAASAVTSLVLARGHR 142
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 85/134 (63%), Positives = 103/134 (76%)
Query: 150 ALVMSKGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWH 209
A+ + GHQTSAESWGTGRAVARIPRV GGGTHRSGQ AFGNMCR GRMFAPT+ WRRW+
Sbjct: 52 AVAENAGHQTSAESWGTGRAVARIPRVGGGGTHRSGQAAFGNMCRGGRMFAPTKTWRRWN 111
Query: 210 RKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLH 269
KVN N++RYA SAIAAS+V +LV+++GH ++ V E PLVVS++ + KTK A L
Sbjct: 112 VKVNHNEKRYATASAIAASAVTSLVLARGHRVEQVKELPLVVSNEFESVTKTKDAVAVLK 171
Query: 270 RIKAWNDVLKVQSS 283
+ A DV+KV S
Sbjct: 172 AVGAHKDVVKVIKS 185
>GENEDB_PFALCIPARUM|PFE0350c [details] [associations]
symbol:PFE0350c "60S ribosomal subunit protein
L4/L1, putative" species:5833 "Plasmodium falciparum" [GO:0015934
"large ribosomal subunit" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 EMBL:AL844504
GO:GO:0015934 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
Pfam:PF14374 ProtClustDB:PTZ00428 RefSeq:XP_001351629.1
ProteinModelPortal:Q8I431 SMR:Q8I431 IntAct:Q8I431
MINT:MINT-1588049 PRIDE:Q8I431 EnsemblProtists:PFE0350c:mRNA
GeneID:812881 KEGG:pfa:PFE0350c EuPathDB:PlasmoDB:PF3D7_0507100
Uniprot:Q8I431
Length = 411
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 20 RPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTSA 79
RP+ VYS + V +P VF+ PIR D++ V+ N+SKN R PYAV AG++TSA
Sbjct: 5 RPVANVYSTNGKNVVGEVEIPVVFQTPIRNDLIQSVYTNMSKNRRHPYAVKLGAGYETSA 64
Query: 80 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYAM 139
ESWGTGRAVARIPRV GGGTHR+GQGAFGNMCR G MF PT+IWRRW RKVN+ ++RYA+
Sbjct: 65 ESWGTGRAVARIPRVPGGGTHRAGQGAFGNMCRGGGMFNPTKIWRRWGRKVNLKEKRYAV 124
Query: 140 VSAIAASSVPALVMSKGHQTS 160
S+IAAS V +LV+++GH+ S
Sbjct: 125 CSSIAASGVTSLVLARGHRIS 145
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 79/134 (58%), Positives = 103/134 (76%)
Query: 150 ALVMSKGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWH 209
A+ + G++TSAESWGTGRAVARIPRV GGGTHR+GQGAFGNMCR G MF PT+IWRRW
Sbjct: 53 AVKLGAGYETSAESWGTGRAVARIPRVPGGGTHRAGQGAFGNMCRGGGMFNPTKIWRRWG 112
Query: 210 RKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLH 269
RKVN+ ++RYA+ S+IAAS V +LV+++GH I + E PLVVS+ I+ KTK+A FL
Sbjct: 113 RKVNLKEKRYAVCSSIAASGVTSLVLARGHRISHLKEVPLVVSNDIESLSKTKEAVNFLV 172
Query: 270 RIKAWNDVLKVQSS 283
+ ++V ++ S
Sbjct: 173 SLGLKDEVNRLVKS 186
>UNIPROTKB|Q8I431 [details] [associations]
symbol:PFE0350c "60S ribosomal protein L4, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934
Gene3D:3.40.1370.10 SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930
OMA:HTNMRKN InterPro:IPR025755 Pfam:PF14374 ProtClustDB:PTZ00428
RefSeq:XP_001351629.1 ProteinModelPortal:Q8I431 SMR:Q8I431
IntAct:Q8I431 MINT:MINT-1588049 PRIDE:Q8I431
EnsemblProtists:PFE0350c:mRNA GeneID:812881 KEGG:pfa:PFE0350c
EuPathDB:PlasmoDB:PF3D7_0507100 Uniprot:Q8I431
Length = 411
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 87/141 (61%), Positives = 109/141 (77%)
Query: 20 RPLITVYSEKNEPTGQTVTLPSVFKAPIRPDVVNFVHQNLSKNHRQPYAVSKDAGHQTSA 79
RP+ VYS + V +P VF+ PIR D++ V+ N+SKN R PYAV AG++TSA
Sbjct: 5 RPVANVYSTNGKNVVGEVEIPVVFQTPIRNDLIQSVYTNMSKNRRHPYAVKLGAGYETSA 64
Query: 80 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWHRKVNVNQRRYAM 139
ESWGTGRAVARIPRV GGGTHR+GQGAFGNMCR G MF PT+IWRRW RKVN+ ++RYA+
Sbjct: 65 ESWGTGRAVARIPRVPGGGTHRAGQGAFGNMCRGGGMFNPTKIWRRWGRKVNLKEKRYAV 124
Query: 140 VSAIAASSVPALVMSKGHQTS 160
S+IAAS V +LV+++GH+ S
Sbjct: 125 CSSIAASGVTSLVLARGHRIS 145
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 79/134 (58%), Positives = 103/134 (76%)
Query: 150 ALVMSKGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRAGRMFAPTRIWRRWH 209
A+ + G++TSAESWGTGRAVARIPRV GGGTHR+GQGAFGNMCR G MF PT+IWRRW
Sbjct: 53 AVKLGAGYETSAESWGTGRAVARIPRVPGGGTHRAGQGAFGNMCRGGGMFNPTKIWRRWG 112
Query: 210 RKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVVSDKIQEYKKTKQATIFLH 269
RKVN+ ++RYA+ S+IAAS V +LV+++GH I + E PLVVS+ I+ KTK+A FL
Sbjct: 113 RKVNLKEKRYAVCSSIAASGVTSLVLARGHRISHLKEVPLVVSNDIESLSKTKEAVNFLV 172
Query: 270 RIKAWNDVLKVQSS 283
+ ++V ++ S
Sbjct: 173 SLGLKDEVNRLVKS 186
>UNIPROTKB|H3BM89 [details] [associations]
symbol:RPL4 "Ribosomal protein L4, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0003735
EMBL:CH471082 GO:GO:0015934 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
ChiTaRS:RPL4 UniGene:Hs.186350 UniGene:Hs.644628 HGNC:HGNC:10353
EMBL:AC116913 SMR:H3BM89 Ensembl:ENST00000568588 Uniprot:H3BM89
Length = 333
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 61/92 (66%), Positives = 78/92 (84%)
Query: 192 MCRAGRMFAPTRIWRRWHRKVNVNQRRYAMVSAIAASSVPALVMSKGHMIQDVPEFPLVV 251
MCR GRMFAPT+ WRRWHR+VN Q+RYA+ SA+AAS++PALVMSKGH I++VPE PLVV
Sbjct: 1 MCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVV 60
Query: 252 SDKIQEYKKTKQATIFLHRIKAWNDVLKVQSS 283
DK++ YKKTK+A + L ++KAWND+ KV +S
Sbjct: 61 EDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 92
Score = 210 (79.0 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 36/49 (73%), Positives = 44/49 (89%)
Query: 110 MCRAGRMFAPTRIWRRWHRKVNVNQRRYAMVSAIAASSVPALVMSKGHQ 158
MCR GRMFAPT+ WRRWHR+VN Q+RYA+ SA+AAS++PALVMSKGH+
Sbjct: 1 MCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHR 49
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.132 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 286 286 0.00086 115 3 11 22 0.46 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 598 (64 KB)
Total size of DFA: 210 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.68u 0.09s 23.77t Elapsed: 00:00:15
Total cpu time: 23.68u 0.09s 23.77t Elapsed: 00:00:15
Start: Thu Aug 15 10:57:03 2013 End: Thu Aug 15 10:57:18 2013