Query psy13120
Match_columns 384
No_of_seqs 262 out of 1615
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 20:08:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q2w_A Cadherin-2; cell adhesi 100.0 2E-66 6.9E-71 512.2 42.6 363 2-384 31-421 (559)
2 1l3w_A EP-cadherin, C-cadherin 100.0 6.4E-67 2.2E-71 514.0 37.9 361 2-384 37-421 (546)
3 3q2v_A Cadherin-1; cell adhesi 100.0 2.7E-66 9.2E-71 510.4 41.5 361 2-384 31-416 (550)
4 3ubh_A Neural-cadherin; cell a 100.0 2.3E-64 7.7E-69 481.1 42.3 353 2-384 24-401 (419)
5 1q55_A EP-cadherin, C-cadherin 100.0 2.3E-64 7.7E-69 518.1 37.8 361 2-384 186-570 (880)
6 3q2w_A Cadherin-2; cell adhesi 100.0 1.1E-60 3.7E-65 471.3 35.7 360 2-384 142-526 (559)
7 3q2v_A Cadherin-1; cell adhesi 100.0 5.7E-60 2E-64 465.3 38.7 353 2-384 143-518 (550)
8 1l3w_A EP-cadherin, C-cadherin 100.0 1.8E-60 6.2E-65 468.1 27.8 351 2-384 149-522 (546)
9 1q55_A EP-cadherin, C-cadherin 100.0 3.5E-58 1.2E-62 472.2 28.1 352 2-384 298-671 (880)
10 2a62_A Cadherin-8; extracellul 100.0 2.1E-53 7.3E-58 390.1 25.3 277 2-281 32-322 (322)
11 2a62_A Cadherin-8; extracellul 100.0 1E-52 3.5E-57 385.6 23.7 283 82-384 5-299 (322)
12 3ubf_A Neural-cadherin; cell a 100.0 4.3E-50 1.5E-54 368.8 33.4 272 2-287 19-316 (316)
13 3ubf_A Neural-cadherin; cell a 100.0 5.8E-48 2E-52 354.6 31.2 268 96-383 6-294 (316)
14 3ubh_A Neural-cadherin; cell a 100.0 7.7E-46 2.6E-50 353.2 31.2 272 93-383 8-299 (419)
15 2a4e_A Cadherin-11; dimer, cal 100.0 4.6E-40 1.6E-44 284.2 24.5 202 82-289 6-215 (215)
16 3mvs_A Cadherin-23, otocadheri 100.0 2.9E-40 9.8E-45 285.4 22.7 204 73-287 3-210 (210)
17 2x2u_A Proto-oncogene tyrosine 100.0 3.7E-42 1.3E-46 303.8 10.8 210 77-291 2-245 (246)
18 2qvi_A Cadherin-2; beta barrel 100.0 8.5E-38 2.9E-42 270.4 21.3 198 83-282 6-215 (215)
19 2a4e_A Cadherin-11; dimer, cal 100.0 3.2E-37 1.1E-41 266.4 23.2 176 2-180 33-215 (215)
20 3qrb_A Cadherin-1; cell adhesi 100.0 9.9E-37 3.4E-41 263.9 22.4 193 83-282 6-213 (213)
21 3ppe_A Vascular endothelial ca 100.0 1.4E-35 4.7E-40 254.4 25.0 190 82-282 5-203 (203)
22 3k5r_A Cadherin 13; mouse, str 100.0 4.1E-36 1.4E-40 261.0 20.9 193 82-282 6-218 (218)
23 3mvs_A Cadherin-23, otocadheri 100.0 3.6E-36 1.2E-40 259.7 18.6 183 176-384 3-187 (210)
24 3lnd_A CDH6 protein, cadherin 100.0 1.9E-36 6.5E-41 260.8 15.7 195 82-282 5-207 (207)
25 3qrb_A Cadherin-1; cell adhesi 100.0 1.4E-34 4.8E-39 250.4 21.0 169 2-173 31-213 (213)
26 2x2u_A Proto-oncogene tyrosine 100.0 1E-36 3.6E-41 268.9 7.3 174 7-182 48-245 (246)
27 2qvi_A Cadherin-2; beta barrel 100.0 2.1E-34 7.3E-39 249.0 19.7 169 2-173 31-215 (215)
28 3ppe_A Vascular endothelial ca 100.0 4.2E-33 1.4E-37 238.9 23.5 164 6-173 34-203 (203)
29 3k5r_A Cadherin 13; mouse, str 100.0 3.6E-33 1.2E-37 242.4 19.5 168 3-173 32-218 (218)
30 3lnd_A CDH6 protein, cadherin 100.0 6.5E-34 2.2E-38 245.0 13.2 169 2-173 32-207 (207)
31 4apx_B Protocadherin-15, otoca 100.0 2.4E-31 8E-36 233.1 19.0 199 82-282 22-237 (242)
32 4apx_B Protocadherin-15, otoca 100.0 7.1E-28 2.4E-32 211.0 17.3 184 185-384 21-217 (242)
33 2yst_A Protocadherin-7; BH-PCD 99.9 8.2E-28 2.8E-32 187.9 6.5 114 66-179 2-119 (119)
34 2yst_A Protocadherin-7; BH-PCD 99.9 4.7E-27 1.6E-31 183.6 8.7 116 169-288 2-119 (119)
35 2ee0_A Protocadherin-9; Ca dom 99.9 2.4E-25 8.2E-30 172.2 6.4 108 66-175 2-114 (114)
36 2ee0_A Protocadherin-9; Ca dom 99.9 6.2E-25 2.1E-29 169.9 7.8 110 169-284 2-114 (114)
37 2yqg_A Desmoglein-2, HDGC; cad 99.9 2.9E-22 1E-26 156.8 6.4 113 175-292 6-122 (123)
38 2yqg_A Desmoglein-2, HDGC; cad 99.9 1.4E-22 4.7E-27 158.7 3.6 111 72-183 6-122 (123)
39 1ncg_A N-cadherin; cell adhesi 99.8 1.5E-20 5.2E-25 144.1 9.8 97 82-181 7-110 (110)
40 1ncg_A N-cadherin; cell adhesi 99.8 4.8E-20 1.6E-24 141.3 9.3 98 186-290 7-110 (110)
41 1wyj_A Protocadherin beta 14; 99.8 7.9E-20 2.7E-24 143.0 2.6 106 184-298 11-123 (125)
42 1zvn_A Mn-cadherin; strand dim 99.7 5.7E-18 1.9E-22 126.6 10.3 90 82-173 6-99 (99)
43 1zxk_A Cadherin-8; strand dime 99.7 1E-17 3.5E-22 125.1 10.3 90 82-173 5-98 (98)
44 1zvn_A Mn-cadherin; strand dim 99.7 3.4E-17 1.2E-21 122.3 11.5 91 186-282 6-99 (99)
45 1wyj_A Protocadherin beta 14; 99.7 7.5E-19 2.5E-23 137.4 1.8 103 82-189 13-123 (125)
46 1zxk_A Cadherin-8; strand dime 99.7 4.6E-17 1.6E-21 121.5 11.3 91 186-282 5-98 (98)
47 3k6d_A T-cadherin; cell adhesi 99.7 4.6E-17 1.6E-21 122.0 9.2 88 82-173 5-99 (99)
48 2omz_B Epithelial-cadherin; le 99.7 6.4E-17 2.2E-21 122.5 9.2 89 83-174 10-105 (105)
49 3k6f_A T-cadherin; cell adhesi 99.7 9.8E-17 3.4E-21 120.4 10.0 88 82-173 6-100 (100)
50 3k6i_A T-cadherin; cell adhesi 99.7 1.4E-16 4.9E-21 119.3 10.6 87 83-173 6-99 (99)
51 3k6d_A T-cadherin; cell adhesi 99.7 1.4E-16 4.9E-21 119.3 9.9 88 187-282 6-99 (99)
52 3k6f_A T-cadherin; cell adhesi 99.7 6.1E-16 2.1E-20 116.1 11.3 88 187-282 7-100 (100)
53 3k6i_A T-cadherin; cell adhesi 99.7 8.5E-16 2.9E-20 115.1 11.9 87 188-282 7-99 (99)
54 2omz_B Epithelial-cadherin; le 99.6 7.5E-16 2.5E-20 116.6 9.3 90 187-283 10-105 (105)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.4 2.8E-14 9.7E-19 107.5 1.9 93 184-286 3-103 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.3 1E-13 3.6E-18 104.4 0.3 92 82-177 5-103 (103)
57 3pdd_A Glycoside hydrolase, fa 96.3 0.12 4.2E-06 42.6 14.0 117 37-172 59-179 (190)
58 3pdd_A Glycoside hydrolase, fa 96.0 0.31 1.1E-05 40.1 15.1 118 143-282 59-180 (190)
59 3rb5_A Na/Ca exchange protein; 94.9 1.9 6.5E-05 38.1 17.3 144 175-334 6-163 (298)
60 3rb5_A Na/Ca exchange protein; 94.4 2.4 8.4E-05 37.4 16.3 144 72-225 6-166 (298)
61 2kpn_A Bacillolysin; solution 92.7 0.46 1.6E-05 34.6 7.2 83 72-177 7-89 (103)
62 2yhg_A SDE_182CT, cellulose-bi 92.2 1.6 5.4E-05 40.6 11.8 90 73-171 331-436 (437)
63 2yhg_A SDE_182CT, cellulose-bi 91.8 1.6 5.5E-05 40.5 11.5 67 206-280 365-436 (437)
64 2yrl_A KIAA1837 protein; PKD d 91.5 0.56 1.9E-05 34.2 6.7 32 37-73 67-98 (102)
65 1op4_A Neural-cadherin; beta s 90.6 2.6 9E-05 33.2 10.0 81 177-264 32-112 (159)
66 1op4_A Neural-cadherin; beta s 89.3 1.1 3.7E-05 35.4 6.8 77 286-383 32-108 (159)
67 2yrl_A KIAA1837 protein; PKD d 87.9 2.7 9.4E-05 30.4 7.9 32 248-285 67-98 (102)
68 3ead_A Na/Ca exchange protein; 84.0 10 0.00035 29.0 9.8 117 177-303 3-133 (137)
69 2kpn_A Bacillolysin; solution 79.9 4.8 0.00016 29.2 6.1 45 238-288 47-91 (103)
70 2y72_A Collagenase, collagenas 71.0 8.9 0.00031 26.4 5.4 31 245-281 54-84 (85)
71 3ead_A Na/Ca exchange protein; 70.2 33 0.0011 26.0 10.5 44 74-120 3-47 (137)
72 2y72_A Collagenase, collagenas 70.0 11 0.00036 26.1 5.6 30 35-69 55-84 (85)
73 3gin_A Sodium/calcium exchange 64.6 40 0.0014 26.4 8.6 104 165-282 10-113 (160)
74 3pe9_A Fibronectin(III)-like m 62.0 12 0.0004 26.8 4.6 29 249-282 60-88 (98)
75 1u2c_A Dystroglycan; IG-like d 59.8 43 0.0015 28.2 8.2 59 224-285 44-104 (246)
76 1u2c_A Dystroglycan; IG-like d 59.6 77 0.0026 26.7 9.7 69 3-73 31-104 (246)
77 3us9_A Sodium/calcium exchange 59.1 91 0.0031 27.2 20.1 137 187-334 18-181 (295)
78 3ott_A Two-component system se 58.4 36 0.0012 33.9 9.3 77 98-183 677-753 (758)
79 2c4x_A Endoglucanase, ctcel9D- 58.4 76 0.0026 27.1 9.9 32 34-70 64-95 (260)
80 3pe9_A Fibronectin(III)-like m 57.0 17 0.00058 26.0 4.7 29 38-70 60-88 (98)
81 4a2l_A BT_4663, two-component 47.6 1.1E+02 0.0037 30.6 10.8 77 96-182 710-786 (795)
82 2e7m_A Protein KIAA0319; PKD d 46.9 37 0.0013 24.8 5.1 57 215-282 48-105 (113)
83 3us9_A Sodium/calcium exchange 45.8 1.5E+02 0.0051 25.8 23.7 140 77-224 12-183 (295)
84 2c4x_A Endoglucanase, ctcel9D- 39.8 1.8E+02 0.006 24.8 9.6 34 244-283 63-96 (260)
85 3ott_A Two-component system se 34.6 1.5E+02 0.0053 29.3 9.5 77 201-291 676-752 (758)
86 1b4r_A Protein (PKD1_human); P 32.1 84 0.0029 21.3 4.8 30 245-281 50-79 (80)
87 3lpw_A A77-A78 domain from tit 31.6 1.7E+02 0.006 22.4 8.7 19 247-265 166-184 (197)
88 1wgo_A VPS10 domain-containing 31.4 52 0.0018 24.3 3.8 30 245-281 89-118 (123)
89 3v9f_A Two-component system se 29.2 1.1E+02 0.0037 30.5 7.2 59 109-172 717-775 (781)
90 4a2l_A BT_4663, two-component 27.1 4.1E+02 0.014 26.3 11.1 76 201-291 711-786 (795)
91 3gin_A Sodium/calcium exchange 27.0 2.2E+02 0.0076 22.1 9.3 100 61-172 9-112 (160)
92 1b4r_A Protein (PKD1_human); P 26.4 1.2E+02 0.0043 20.4 4.9 28 35-68 51-78 (80)
93 2kzw_A Uncharacterized protein 22.6 1.5E+02 0.0053 22.6 5.4 30 35-70 110-139 (145)
94 2ptt_B Natural killer cell rec 20.9 2.5E+02 0.0084 20.4 6.2 47 16-70 66-112 (112)
No 1
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=2e-66 Score=512.17 Aligned_cols=363 Identities=30% Similarity=0.435 Sum_probs=329.4
Q ss_pred CccEEEEEEeCCC----CCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120 2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE 77 (384)
Q Consensus 2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~ 77 (384)
|+.|+|+|.+++. .++|.||+.+|.|++.+.||||....|.|+|+|+|+++++ +++++.|.|.|.|+|||+|.
T Consensus 31 n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g~~~---~~~~~~v~I~V~DvNDn~P~ 107 (559)
T 3q2w_A 31 NLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQ---VENPIDIVINVIDMNDNRPE 107 (559)
T ss_dssp TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCE---EEEEEEEEEEEECCCCCCCE
T ss_pred CcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEECCCCc---cceeEEEEEEEEeCCCCCCc
Confidence 6789999987544 3689999999999999999999999999999999998764 68889999999999999999
Q ss_pred EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC--CCceEEEEEEcCCC-----CCeeeeCcceEEEEce-eCCccCCCeEE
Q psy13120 78 FITA-NETTIPENSPLNTVVAALKAIDRDEG--QNSYVEYSIINSEA-----TPFSLGPVDGLLRVAQ-KLDREIKSNYT 148 (384)
Q Consensus 78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~--~~~~~~y~l~~~~~-----~~F~i~~~~G~i~~~~-~ld~e~~~~~~ 148 (384)
|... |.++|+|++++|+.++++.|+|+|.+ .|+.++|+|.++.. +.|.|++.+|.|++.+ .||||....|.
T Consensus 108 F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~ 187 (559)
T 3q2w_A 108 FLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYT 187 (559)
T ss_dssp ESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEE
T ss_pred cCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEE
Confidence 9988 99999999999999999999999987 58899999987632 6899999999999987 99999999999
Q ss_pred EEEEEEeCCC---CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCC--CceEEEEEEeC
Q psy13120 149 LEIKAKDRGE---PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGI--NGRVRYTIISG 223 (384)
Q Consensus 149 l~V~a~d~~~---~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~--~~~i~y~i~~~ 223 (384)
|+|+|+|+++ ++++++++|+|+|.|+|||+|.|....|.+.|+|+. +|+.++++.|+|+|.+. ++.+.|+|.++
T Consensus 188 l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g 266 (559)
T 3q2w_A 188 LIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGG 266 (559)
T ss_dssp EEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEES
T ss_pred EEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecC
Confidence 9999999854 358999999999999999999999999999999997 89999999999999865 56799999999
Q ss_pred CCCCCeEE----ECCCcEEEEcccCCccccCeEEEEEEEEECCCCCc--ceeeeeEEEEEEEEeecCCCCCcccCCCeeE
Q psy13120 224 DDNHDLTI----SEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTE--ERIRFDTATVSILVSDINDNYPVFLHSPYLA 297 (384)
Q Consensus 224 ~~~~~f~i----~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~--~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~ 297 (384)
+..+.|.| ++.+|.|++.++||||....|.|+|+|+|++.... .+.++++++|+|.|.|+|| +|.|.+..|.+
T Consensus 267 ~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~ 345 (559)
T 3q2w_A 267 DPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKII 345 (559)
T ss_dssp CTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEE
T ss_pred CCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEE
Confidence 98999999 46799999999999999999999999999753110 0113789999999999999 79999999999
Q ss_pred EEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc----c
Q psy13120 298 LVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ----A 373 (384)
Q Consensus 298 ~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~----~ 373 (384)
.|.|+..+ |..++++.|+|+|.+. ++.++|+|.. +..++|.|++.+|.|++.+.||||.. .
T Consensus 346 ~v~En~~~--g~~v~~v~A~D~D~g~-n~~i~Ysi~~------------~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~ 410 (559)
T 3q2w_A 346 RQEEGLHA--GTMLTTLTAQDPDRYM-QQNIRYTKLS------------DPANWLKIDPVNGQITTIAVLDRESPNVKNN 410 (559)
T ss_dssp EEESCCCT--TCEEEECCEECSCSSS-CCCEEEEEEE------------CTTCCEEECTTTCEEEESSCCCSSSTTSCSS
T ss_pred EEeCCCCC--CCEEEEEEEECCCCCC-CCceEEEEcc------------CCccceEecCCceEEEEccccCcccccccCC
Confidence 99999944 8899999999999987 8999999987 56789999999999999999999986 9
Q ss_pred EEEEEEEEEcC
Q psy13120 374 EYLLTLQAMDS 384 (384)
Q Consensus 374 ~~~l~V~a~D~ 384 (384)
.|+|+|+|+|+
T Consensus 411 ~y~l~V~A~D~ 421 (559)
T 3q2w_A 411 IYNATFLASDN 421 (559)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEEcC
Confidence 99999999995
No 2
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=6.4e-67 Score=513.98 Aligned_cols=361 Identities=30% Similarity=0.446 Sum_probs=330.2
Q ss_pred CccEEEEEEeCCC----CCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120 2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE 77 (384)
Q Consensus 2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~ 77 (384)
|+.|+|+|.+++. .++|+|++.+|.|++++.||||....|.|+|+|+|.++++ +++++.|+|.|.|+|||+|.
T Consensus 37 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~~~~~---~~~~~~v~I~V~DvNDn~P~ 113 (546)
T 1l3w_A 37 FNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSP---VEEPMEITINVIDQNDNRPK 113 (546)
T ss_dssp SSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCB---CSCCEEEEEEEECCSCCCCE
T ss_pred CceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEEEEEEEEeCCCCc---ccceEEEEEEEEecccCcCE
Confidence 6889999987653 4689999999999999999999999999999999998764 57789999999999999999
Q ss_pred EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC-----CCCeeeeCcceEEEEc-eeCCccCCCeE
Q psy13120 78 FITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINSE-----ATPFSLGPVDGLLRVA-QKLDREIKSNY 147 (384)
Q Consensus 78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~-~~ld~e~~~~~ 147 (384)
|... |.+.|+|++++|+.++++.|+|+|.+ .|+.++|+|.++. .+.|.|++.+|.|++. +.||||....|
T Consensus 114 F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y 193 (546)
T 1l3w_A 114 FTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEY 193 (546)
T ss_dssp ESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEE
T ss_pred ecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceE
Confidence 9988 89999999999999999999999998 6889999998764 3689999999999985 79999999999
Q ss_pred EEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCC--CCCCceEEEEEEeCCC
Q psy13120 148 TLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLD--DGINGRVRYTIISGDD 225 (384)
Q Consensus 148 ~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D--~~~~~~i~y~i~~~~~ 225 (384)
.|+|+|+|+++|++++.++|+|.|.|+|||+|.|....|.+.|+|+ ++|+.|+++.|+|+| .+.++.++|+|.+ +.
T Consensus 194 ~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~ 271 (546)
T 1l3w_A 194 TLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NE 271 (546)
T ss_dssp EEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CT
T ss_pred EEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-CC
Confidence 9999999999888999999999999999999999999999999999 999999999999999 6778899999986 67
Q ss_pred CCCeEEE----CCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcC
Q psy13120 226 NHDLTIS----EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301 (384)
Q Consensus 226 ~~~f~i~----~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e 301 (384)
.+.|.|+ ..+|.|++.++||||....|.|+|+|+|+++... +.++++++|+|+|.|+|| +|+|.+..|.+.|.|
T Consensus 272 ~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~-~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~E 349 (546)
T 1l3w_A 272 GGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSV-PLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSE 349 (546)
T ss_dssp TSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSS-CCCCCCEEEEEEEECCCC-CCEESSCEECCCBCT
T ss_pred CceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCC-CCcceeEEEEEEEEcCCC-CCcEecceEEEEEeC
Confidence 7899996 2589999999999999999999999999874211 013678999999999999 999999999999999
Q ss_pred CCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc----cEEEE
Q psy13120 302 NTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ----AEYLL 377 (384)
Q Consensus 302 ~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~----~~~~l 377 (384)
+..+ |..++++.|+|+|.+. ++.++|+|.. +..++|.|++.+|.|++.+.||||.. ..|+|
T Consensus 350 n~~~--g~~v~~v~A~D~D~g~-n~~i~ysi~~------------~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l 414 (546)
T 1l3w_A 350 DLSR--GEKIISLVAQDPDKQQ-IQKLSYFIGN------------DPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTV 414 (546)
T ss_dssp TCCS--SEEEEECCEECCCTTC-CCCEEEEECC------------CSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEE
T ss_pred CCCC--CCEEEEEEEECCCCCC-CceEEEEECC------------CCCCcEEEeCCcEEEEECCccCCccccCCCCEEEE
Confidence 9944 8999999999999987 8999999986 45689999999999999999999997 89999
Q ss_pred EEEEEcC
Q psy13120 378 TLQAMDS 384 (384)
Q Consensus 378 ~V~a~D~ 384 (384)
+|+|+|+
T Consensus 415 ~V~a~D~ 421 (546)
T 1l3w_A 415 IMLVTDD 421 (546)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999994
No 3
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=2.7e-66 Score=510.36 Aligned_cols=361 Identities=29% Similarity=0.443 Sum_probs=329.7
Q ss_pred CccEEEEEEeCC----CCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120 2 NGRLEYSIVSGD----DEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE 77 (384)
Q Consensus 2 ~~~i~Y~i~~~~----~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~ 77 (384)
|++|+|+|.+++ +.++|.|++.+|.|++++.||||....|.|+++|+|.++++ ++.++.|+|.|.|+|||+|.
T Consensus 31 ~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~~~~---~~~~~~v~I~V~DvNDn~P~ 107 (550)
T 3q2v_A 31 ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEA---VEDPMEIVITVTDQNDNRPE 107 (550)
T ss_dssp TSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCB---CSCCEEEEEEEECCSCCCCC
T ss_pred CceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEeCCCCc---ccceEEEEEEEEecCCCCCc
Confidence 678999998743 34699999999999999999999999999999999998754 47788999999999999999
Q ss_pred EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcC-----CCCCeeeeCcceEEEE-ceeCCccCCCeE
Q psy13120 78 FITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINS-----EATPFSLGPVDGLLRV-AQKLDREIKSNY 147 (384)
Q Consensus 78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~-~~~ld~e~~~~~ 147 (384)
|... |.+.|+|++++|+.++++.|+|+|.+ .|+.++|+|.++ ..+.|.|++.+|.|++ .+.||||....|
T Consensus 108 F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y 187 (550)
T 3q2v_A 108 FTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTY 187 (550)
T ss_dssp BSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEE
T ss_pred cCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEE
Confidence 9988 99999999999999999999999998 788999999875 2468999999999998 579999999999
Q ss_pred EEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCc--eEEEEEEeCCC
Q psy13120 148 TLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING--RVRYTIISGDD 225 (384)
Q Consensus 148 ~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~--~i~y~i~~~~~ 225 (384)
.|+|+|+|+|+++++++++|+|+|.|+|||+|.|....|.+.|.|+ +.|+.|+++.|+|+|.+.++ .+.|+|.+ +.
T Consensus 188 ~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~~ 265 (550)
T 3q2v_A 188 TLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN-DP 265 (550)
T ss_dssp EEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS-CS
T ss_pred EEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-CC
Confidence 9999999998889999999999999999999999999999999999 99999999999999988665 46799985 77
Q ss_pred CCCeEEE----CCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcC
Q psy13120 226 NHDLTIS----EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301 (384)
Q Consensus 226 ~~~f~i~----~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e 301 (384)
.+.|.|+ +.+|.|++.++||||....|.|+|+|+|++.... +..+++++|+|+|.|+|| +|.|.+..|...|+|
T Consensus 266 ~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~-~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E 343 (550)
T 3q2v_A 266 DQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEG-SLVPSTATVTVDVVDVNE-APIFMPAERRVEVPE 343 (550)
T ss_dssp SCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCS-SCCCEEEEEEEEEECCCC-CCEESSSSCEEEEET
T ss_pred CCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCC-CccceEEEEEEEEEecCC-CCeEcCcceEEEEec
Confidence 8899998 6899999999999999999999999999874211 013688999999999999 999999999999999
Q ss_pred CCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc-----cEEE
Q psy13120 302 NTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ-----AEYL 376 (384)
Q Consensus 302 ~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~-----~~~~ 376 (384)
+..+ |+.++++.|+|+|.+. ++.++|+|.+ +..++|.|++.+|.|++.+.||||.. ..|.
T Consensus 344 ~~~~--gt~v~~v~A~D~D~g~-n~~i~y~i~~------------~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~ 408 (550)
T 3q2v_A 344 DFGV--GQEITSYTAREPDTFM-DQKITYRIWR------------DTANWLEINPETGAIFTRAEMDREDAEHVKNSTYV 408 (550)
T ss_dssp TCCS--SCEEEECCEECCCCST-TCCCEEEEEE------------CTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEE
T ss_pred CCCC--CCEEEEEeCCCCCCCC-CCCEEEEEec------------CCCCcEEEeCCCcEEEECCccCcccccccCCCEEE
Confidence 9944 8899999999999987 8999999986 56789999999999999999999998 9999
Q ss_pred EEEEEEcC
Q psy13120 377 LTLQAMDS 384 (384)
Q Consensus 377 l~V~a~D~ 384 (384)
|+|+|+|+
T Consensus 409 l~V~A~D~ 416 (550)
T 3q2v_A 409 ALIIATDD 416 (550)
T ss_dssp EEEEEECC
T ss_pred EEEEEEeC
Confidence 99999995
No 4
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=2.3e-64 Score=481.05 Aligned_cols=353 Identities=29% Similarity=0.454 Sum_probs=317.4
Q ss_pred CccEEEEEEeCCCCCcEEEeC--------CCcEEEECccCCcCCC---cEEEEEEEEEeCCCCCCCCceeEEEEEEEEEe
Q psy13120 2 NGRLEYSIVSGDDEEIFTINP--------SNGTLSNLKHLDRETK---SSYNLVVMATDMAKPPQKRLSSTTQVSIVIRD 70 (384)
Q Consensus 2 ~~~i~Y~i~~~~~~~~F~id~--------~tG~i~~~~~lD~E~~---~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~d 70 (384)
|+.|+|+|.++++...|+|++ .+|.|++++.||||.. ..|.|.|.|+|.+.++...+++.+.|+|.|.|
T Consensus 24 n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~D 103 (419)
T 3ubh_A 24 EGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKD 103 (419)
T ss_dssp TTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEEC
T ss_pred CceEEEEEecCCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEE
Confidence 789999998877778899997 8999999999999997 79999999999875433346888999999999
Q ss_pred ecCCCCEEccC---ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC-CCCCeeeeCcceEEEEceeCCccCCCe
Q psy13120 71 VNDNAPEFITA---NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS-EATPFSLGPVDGLLRVAQKLDREIKSN 146 (384)
Q Consensus 71 vNd~~P~f~~~---~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~~~~ 146 (384)
+|||+|.|... +...|+|++++|+.++++.|+|+|.+.+ ++|+|..+ ..+.|.|++.+|.|++.+.||+|....
T Consensus 104 vNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~~tG~i~~~~~ld~e~~~~ 181 (419)
T 3ubh_A 104 VNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDME 181 (419)
T ss_dssp CCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECTTTCEEEECSSSCCCBTCE
T ss_pred CCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeCCceEEEEecccccccccE
Confidence 99999999876 5789999999999999999999999877 89999865 457999999999999999999999999
Q ss_pred EEEEEEEEeCCCC----CCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEE-
Q psy13120 147 YTLEIKAKDRGEP----SKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTII- 221 (384)
Q Consensus 147 ~~l~V~a~d~~~~----~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~- 221 (384)
|.|+|+|+|++++ .+++++.++|.|.| |||+|.|....|.+.|+|+.++|+.|+++.|+|+| ++.++|+|.
T Consensus 182 y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~ 257 (419)
T 3ubh_A 182 YVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKA 257 (419)
T ss_dssp EEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEE
T ss_pred EEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEec
Confidence 9999999998764 45778889999999 99999999999999999999999999999999987 678999997
Q ss_pred eCCCCCCeEEECCCcEEEEcccCCccccC---eEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeE-
Q psy13120 222 SGDDNHDLTISEDNGLLRIAKNLNYERKA---QYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLA- 297 (384)
Q Consensus 222 ~~~~~~~f~i~~~~G~l~~~~~lD~e~~~---~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~- 297 (384)
.++..++|.|++.+|.|++.++||||... .|.|+|+|+|.+++ .+++++|+|.|.|+|||+|+|....|..
T Consensus 258 ~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~-----~s~~~~v~I~V~DvNDn~P~f~~~~~~~~ 332 (419)
T 3ubh_A 258 QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG-----FSTSVDLTIRVTDVNDNAPKFELPDYQAH 332 (419)
T ss_dssp SSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTTTS-----CEEEEEEEEEEECCCCCCCEESSSEEEEE
T ss_pred CCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCCCC-----cEEEEEEEEEEEccCCCCCcccCCcceeE
Confidence 46777899999999999999999999875 79999999975443 2788999999999999999999988987
Q ss_pred EEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCccc-ccEEE
Q psy13120 298 LVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREK-QAEYL 376 (384)
Q Consensus 298 ~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~-~~~~~ 376 (384)
.|.|+..+ |+.++++.|+|+|.+. |+.++|+|.+ ++|.|++ +|.|++++.||||. ...|+
T Consensus 333 ~v~E~~~~--gt~v~~v~A~D~D~g~-n~~v~Y~i~~---------------~~F~Id~-~G~i~~~~~ld~E~~~~~y~ 393 (419)
T 3ubh_A 333 NVDEDIPL--GTSILRVKAMDSDSGS-NAEIEYLVSD---------------DHFAVDS-NGIIVNNKQLDADNNNAYYE 393 (419)
T ss_dssp EEETTCCT--TCEEEECCEECSSCGG-GGCEEEEESC---------------TTEEECT-TCEEEECSCSSSSCTTCEEE
T ss_pred EecCCCCC--CCEEEEEEEEeCCCCC-CCEEEEEEcC---------------CcEEECC-CeEEEECcccCcccCCceEE
Confidence 79999944 8999999999999988 8999999964 4799998 89999999999998 68999
Q ss_pred EEEEEEcC
Q psy13120 377 LTLQAMDS 384 (384)
Q Consensus 377 l~V~a~D~ 384 (384)
|+|.|+|+
T Consensus 394 l~V~a~D~ 401 (419)
T 3ubh_A 394 FIVTAKDK 401 (419)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99999995
No 5
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=2.3e-64 Score=518.11 Aligned_cols=361 Identities=30% Similarity=0.445 Sum_probs=330.2
Q ss_pred CccEEEEEEeCCC----CCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120 2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE 77 (384)
Q Consensus 2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~ 77 (384)
|+.|+|+|.+++. .++|.|++.+|.|++++.||||....|.|+|+|+|.++++ ++.++.|+|+|.|+|||+|.
T Consensus 186 ~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~g~~~---~~~~~~v~I~V~DvNDn~P~ 262 (880)
T 1q55_A 186 FNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSP---VEEPMEITINVIDQNDNRPK 262 (880)
T ss_dssp SSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCB---CSCCEEEEEEEECCSCCCCE
T ss_pred CceEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccccCccEEEEEEEECCCCc---eeeeEEEEEEEEecCCCCCC
Confidence 6789999987643 3689999999999999999999999999999999998754 57789999999999999999
Q ss_pred EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC-----CCCeeeeCcceEEEEc-eeCCccCCCeE
Q psy13120 78 FITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINSE-----ATPFSLGPVDGLLRVA-QKLDREIKSNY 147 (384)
Q Consensus 78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~-~~ld~e~~~~~ 147 (384)
|... |.++|+|++++|+.++++.|+|+|.+ .|+.++|+|.++. .+.|.|++.+|.|++. +.||||....|
T Consensus 263 F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y 342 (880)
T 1q55_A 263 FTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEY 342 (880)
T ss_dssp ESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEE
T ss_pred ccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHccee
Confidence 9988 89999999999999999999999998 6889999998764 3689999999999985 78999999999
Q ss_pred EEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCC--CCCCceEEEEEEeCCC
Q psy13120 148 TLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLD--DGINGRVRYTIISGDD 225 (384)
Q Consensus 148 ~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D--~~~~~~i~y~i~~~~~ 225 (384)
.|+|+|+|.+++++++.++|+|+|.|+|||+|.|....|.+.|+|+ ++|+.|+++.|+|+| .+.++.++|+|.+ +.
T Consensus 343 ~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~ 420 (880)
T 1q55_A 343 TLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NE 420 (880)
T ss_dssp EEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CT
T ss_pred EEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-CC
Confidence 9999999998888999999999999999999999999999999999 999999999999999 5678899999986 77
Q ss_pred CCCeEEE--C--CCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcC
Q psy13120 226 NHDLTIS--E--DNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301 (384)
Q Consensus 226 ~~~f~i~--~--~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e 301 (384)
.+.|.|+ + .+|.|++.++||||....|.|+|+|+|++.... +..+++++|+|+|.|+|| +|+|.+..|.+.|.|
T Consensus 421 ~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~-~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~E 498 (880)
T 1q55_A 421 GGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSV-PLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSE 498 (880)
T ss_dssp TSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSS-CCCCCCEEEEEEEECCCC-CCEESSCEECCCBCT
T ss_pred CceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCC-CCcceeEEEEEEEEeCCC-CCEEecCceEEEEeC
Confidence 7899995 3 579999999999999999999999999874211 013688999999999999 999999999999999
Q ss_pred CCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc----cEEEE
Q psy13120 302 NTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ----AEYLL 377 (384)
Q Consensus 302 ~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~----~~~~l 377 (384)
+.. .|+.++++.|+|+|.+. ++.++|+|.. +..++|.||+.+|.|++.+.||||.. ..|+|
T Consensus 499 n~~--~Gt~V~~v~A~D~D~g~-n~~v~Ysi~~------------~~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l 563 (880)
T 1q55_A 499 DLS--RGEKIISLVAQDPDKQQ-IQKLSYFIGN------------DPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTV 563 (880)
T ss_dssp TCC--SSEEEEECCEECCCTTC-CCCEEEEECC------------CSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEE
T ss_pred CCC--CCCEEEEEEEEeCCCCC-CCcEEEEECC------------CCCCCEEEeCCccEEEECCccCcccccCCCCEEEE
Confidence 994 48999999999999887 8999999986 56789999999999999999999997 89999
Q ss_pred EEEEEcC
Q psy13120 378 TLQAMDS 384 (384)
Q Consensus 378 ~V~a~D~ 384 (384)
+|.|+|+
T Consensus 564 ~V~A~D~ 570 (880)
T 1q55_A 564 IMLVTDD 570 (880)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999995
No 6
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.1e-60 Score=471.32 Aligned_cols=360 Identities=29% Similarity=0.402 Sum_probs=317.2
Q ss_pred CccEEEEEEeCCCC----CcEEEeCCCcEEEECc-cCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCC
Q psy13120 2 NGRLEYSIVSGDDE----EIFTINPSNGTLSNLK-HLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAP 76 (384)
Q Consensus 2 ~~~i~Y~i~~~~~~----~~F~id~~tG~i~~~~-~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P 76 (384)
|+.++|+|.++.+. ++|+|++.+|.|++.+ .||||....|.|+|+|+|+++.+..++++++.|+|+|.|+|||+|
T Consensus 142 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P 221 (559)
T 3q2w_A 142 NGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPP 221 (559)
T ss_dssp GGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCC
T ss_pred ceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCC
Confidence 67899999876553 6899999999999987 999999999999999999876443347999999999999999999
Q ss_pred EEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCC--CceEEEEEEcCC-CCCeee----eCcceEEEEceeCCccCCCeEE
Q psy13120 77 EFITA-NETTIPENSPLNTVVAALKAIDRDEGQ--NSYVEYSIINSE-ATPFSL----GPVDGLLRVAQKLDREIKSNYT 148 (384)
Q Consensus 77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~--~~~~~y~l~~~~-~~~F~i----~~~~G~i~~~~~ld~e~~~~~~ 148 (384)
.|... |...|+|+. +|+.++++.|+|+|.+. ++.++|+|.++. .+.|.| +..+|.|++.++||||....|.
T Consensus 222 ~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~ 300 (559)
T 3q2w_A 222 EFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFV 300 (559)
T ss_dssp EESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEE
T ss_pred ccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEE
Confidence 99988 899999997 89999999999999975 557999998774 688999 5789999999999999999999
Q ss_pred EEEEEEeCC------CCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEe
Q psy13120 149 LEIKAKDRG------EPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIIS 222 (384)
Q Consensus 149 l~V~a~d~~------~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~ 222 (384)
|+|.|+|++ .+++++.++|+|.|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.+.++.++|+|.+
T Consensus 301 l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~ 379 (559)
T 3q2w_A 301 LTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLS 379 (559)
T ss_dssp EEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEE
T ss_pred EEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEcc
Confidence 999999974 2568899999999999999 699999999999999999999999999999999989999999985
Q ss_pred CCCCCCeEEECCCcEEEEcccCCcccc----CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEE
Q psy13120 223 GDDNHDLTISEDNGLLRIAKNLNYERK----AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLAL 298 (384)
Q Consensus 223 ~~~~~~f~i~~~~G~l~~~~~lD~e~~----~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~ 298 (384)
+..++|.|++.+|.|++.+.||||.. ..|+|+|+|+|++.+++ +++++|+|.|.|+|||+|.|.+..+ .
T Consensus 380 -~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~p~~----ss~~~v~I~V~DvNDn~P~f~~~~~--~ 452 (559)
T 3q2w_A 380 -DPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPM----SGTGTLQIYLLDINDNAPQVLPQEA--E 452 (559)
T ss_dssp -CTTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECSSSCC----EEEEEEEEEEECCSCCCCEESCTTC--C
T ss_pred -CCccceEecCCceEEEEccccCcccccccCCEEEEEEEEEcCCCCcc----eEEEEEEEEEEEccCCCCcccCCce--E
Confidence 45688999999999999999999986 89999999999998875 8899999999999999999986544 5
Q ss_pred EcCCCCCCCceEEEEEEEecCCCCCCCc-eEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEc-ccCCcccccEEE
Q psy13120 299 VNENTLPGPSFRIMTVQAHDADSLPFNG-LVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLL-KSLDREKQAEYL 376 (384)
Q Consensus 299 v~e~~~~~~g~~i~~v~a~D~D~~~~~~-~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~-~~ld~e~~~~~~ 376 (384)
++|+. + ..+++|.|+|+|.+. ++ +++|+|... .++..+.|+|++.+|.+.+. ..++++..+.|.
T Consensus 453 v~e~~--~--~~v~~v~A~D~D~~~-n~~~~~ysl~~~---------~~~~~~~f~i~~~~G~~~~~~~~~~~~~~~~~~ 518 (559)
T 3q2w_A 453 TCETP--E--PNSINITALDYDIDP-NAGPFAFDLPLS---------PVTIKRNWTINRLNGDFAQLNLKIKFLEAGIYE 518 (559)
T ss_dssp CCSCC--C--TTCEEECEECSCCTT-SSSSCEEECCSS---------SHHHHHHEEEEECSSSCEEEEECSCC-CCEEEE
T ss_pred EeecC--C--CcEEEEEEEcCCCCC-CCCCEEEEEcCC---------CCccCCCeEEEecCCCEEEEEeccCcccCcEEE
Confidence 77883 2 236799999999987 55 899999851 00235789999999998655 468999999999
Q ss_pred EEEEEEcC
Q psy13120 377 LTLQAMDS 384 (384)
Q Consensus 377 l~V~a~D~ 384 (384)
|.|+|+|+
T Consensus 519 l~V~~~D~ 526 (559)
T 3q2w_A 519 VPIIITDS 526 (559)
T ss_dssp EEEEEECS
T ss_pred EEEEEEEC
Confidence 99999995
No 7
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=5.7e-60 Score=465.32 Aligned_cols=353 Identities=28% Similarity=0.445 Sum_probs=311.9
Q ss_pred CccEEEEEEeCCC----CCcEEEeCCCcEEEE-CccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCC
Q psy13120 2 NGRLEYSIVSGDD----EEIFTINPSNGTLSN-LKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAP 76 (384)
Q Consensus 2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~-~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P 76 (384)
|+.++|+|.++++ .++|+|++.+|.|++ .+.||||....|.|+|+|+|+++++ +++++.|+|+|.|+|||+|
T Consensus 143 N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~---~s~t~~v~I~V~DvNDn~P 219 (550)
T 3q2v_A 143 NAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEG---LSTTAKAVITVKDINDNAP 219 (550)
T ss_dssp GGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTS---CCCEEEEEEEEECCSCSCC
T ss_pred ceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCC---eeEEEEEEEEecccCCCCC
Confidence 6899999988653 468999999999998 4799999999999999999987754 6999999999999999999
Q ss_pred EEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCce--EEEEEEcCCCCCeeee----CcceEEEEceeCCccCCCeEEE
Q psy13120 77 EFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSY--VEYSIINSEATPFSLG----PVDGLLRVAQKLDREIKSNYTL 149 (384)
Q Consensus 77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~--~~y~l~~~~~~~F~i~----~~~G~i~~~~~ld~e~~~~~~l 149 (384)
.|... |...|+|+ ++|+.++++.|+|+|.+.++. ++|+|.+...+.|.|+ +.+|.|++.++||||....|.|
T Consensus 220 ~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l 298 (550)
T 3q2v_A 220 VFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYIL 298 (550)
T ss_dssp EESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEE
T ss_pred EEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCCCcEEEEecCCCccEEEEecccCCccccceEEE
Confidence 99988 99999999 999999999999999987764 6799998777899998 6899999999999999999999
Q ss_pred EEEEEeCCC---CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCC
Q psy13120 150 EIKAKDRGE---PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN 226 (384)
Q Consensus 150 ~V~a~d~~~---~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~ 226 (384)
+|.|+|++. +.+++.++|+|.|.|+|| +|.|....|.+.|+|+.++|+.|+++.|+|+|.+.++.++|+|. ++..
T Consensus 299 ~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~-~~~~ 376 (550)
T 3q2v_A 299 HVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIW-RDTA 376 (550)
T ss_dssp EEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEE-ECTT
T ss_pred EEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEe-cCCC
Confidence 999999873 457899999999999999 99999999999999999999999999999999998999999997 4567
Q ss_pred CCeEEECCCcEEEEcccCCcccc-----CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcC
Q psy13120 227 HDLTISEDNGLLRIAKNLNYERK-----AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNE 301 (384)
Q Consensus 227 ~~f~i~~~~G~l~~~~~lD~e~~-----~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e 301 (384)
++|.|++.+|.|++.+.||||.. ..|.|+|+|+|++.++. +++++|+|.|.|+|||+|+|. .|...++|
T Consensus 377 ~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g~p~~----s~~~~v~I~V~DvNDn~P~~~--~~~~~v~e 450 (550)
T 3q2v_A 377 NWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSPIA----TGTGTLLLVLLDVNDNAPIPE--PRNMQFCQ 450 (550)
T ss_dssp CCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCSSSCC----CEEEEEEEEEECCCCCCCEES--CSSCEEES
T ss_pred CcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEeCCCCcc----eeEEEEEEEEEeCCCCCCcCc--Ccccceee
Confidence 88999999999999999999998 89999999999998875 789999999999999999997 46778999
Q ss_pred CCCCCCceEEEEEEEecCCCCCCCc-eEEEEEecCCCCCCCCcCCCCCCCceEE--eCCcceEEEcccCCcccccEEEEE
Q psy13120 302 NTLPGPSFRIMTVQAHDADSLPFNG-LVRYFLKDSGASSGNSQTQGGTGDLFRV--NSTTGDIYLLKSLDREKQAEYLLT 378 (384)
Q Consensus 302 ~~~~~~g~~i~~v~a~D~D~~~~~~-~i~y~l~~~~~~~~~~~~~~~~~~~f~I--d~~tG~i~~~~~ld~e~~~~~~l~ 378 (384)
+... +. + |.|+|+|.+. ++ .++|+|.+ +....|.| +..+|.+...+.+++|..+.|.|.
T Consensus 451 ~~~~--~~-~--v~A~D~D~~~-n~~~~~~~l~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~y~l~ 512 (550)
T 3q2v_A 451 RNPQ--PH-I--ITILDPDLPP-NTSPFTAELTH------------GASVNWTIEYNDAAQESLILQPRKDLEIGEYKIH 512 (550)
T ss_dssp SSCC--CE-E--EEEECCSCTT-SSSSCCCEEEE------------CCSSSCEEECCSTTSSEEEEECSCC----CEECE
T ss_pred cCCC--cE-E--EEEECCCCCC-CCCCEEEEECC------------CCCCCeEEEEecCCCcEEEEEecccCCCceEEEE
Confidence 9843 43 3 9999999987 55 68999987 33334544 444599888888999999999999
Q ss_pred EEEEcC
Q psy13120 379 LQAMDS 384 (384)
Q Consensus 379 V~a~D~ 384 (384)
|+|+|+
T Consensus 513 V~a~D~ 518 (550)
T 3q2v_A 513 LKLADN 518 (550)
T ss_dssp EECCSS
T ss_pred EEEEEC
Confidence 999995
No 8
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.8e-60 Score=468.13 Aligned_cols=351 Identities=29% Similarity=0.402 Sum_probs=312.3
Q ss_pred CccEEEEEEeCCC----CCcEEEeCCCcEEEEC-ccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCC
Q psy13120 2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNL-KHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAP 76 (384)
Q Consensus 2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P 76 (384)
|+.|+|+|.++.+ .++|+|++.+|.|++. +.||||....|.|+|+|+|+++++ +++++.|+|.|.|+|||+|
T Consensus 149 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~---~s~~~~v~I~V~DvNDn~P 225 (546)
T 1l3w_A 149 NGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG---LSVEGKAIIQITDANDNAP 225 (546)
T ss_dssp TTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTS---CEEECCEEEEEECCCCCCC
T ss_pred CCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCC---cceEEEEEEEEeecCCCCC
Confidence 6899999998763 4799999999999985 799999999999999999998754 6999999999999999999
Q ss_pred EEccC-ceeEeeCCCCCCcEEEEEEEEeCC--CCCCceEEEEEEcCCCCCeeee----CcceEEEEceeCCccCCCeEEE
Q psy13120 77 EFITA-NETTIPENSPLNTVVAALKAIDRD--EGQNSYVEYSIINSEATPFSLG----PVDGLLRVAQKLDREIKSNYTL 149 (384)
Q Consensus 77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D--~~~~~~~~y~l~~~~~~~F~i~----~~~G~i~~~~~ld~e~~~~~~l 149 (384)
.|... |...|+|+ ++|+.++++.|+|+| .+.|+.++|+|.+...+.|.|+ ..+|.|++.++||||....|.|
T Consensus 226 ~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l 304 (546)
T 1l3w_A 226 IFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVL 304 (546)
T ss_dssp CBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEE
T ss_pred ccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCCceEEEEecCCCCeEEEEECccCCcccccEEEE
Confidence 99988 99999999 999999999999999 6788899999998556789996 2689999999999999999999
Q ss_pred EEEEEeCCC---CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCC
Q psy13120 150 EIKAKDRGE---PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN 226 (384)
Q Consensus 150 ~V~a~d~~~---~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~ 226 (384)
+|.|+|+++ |.+++.++|+|.|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.+.++.++|+|.+ +..
T Consensus 305 ~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~-~~~ 382 (546)
T 1l3w_A 305 QITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN-DPA 382 (546)
T ss_dssp EECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC-CSS
T ss_pred EEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECC-CCC
Confidence 999999863 467899999999999999 999999999999999999999999999999999889999999984 456
Q ss_pred CCeEEECCCcEEEEcccCCcccc----CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCC
Q psy13120 227 HDLTISEDNGLLRIAKNLNYERK----AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNEN 302 (384)
Q Consensus 227 ~~f~i~~~~G~l~~~~~lD~e~~----~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~ 302 (384)
++|.|++.+|.|++.+.||||.. ..|+|+|+|+|++.++. +++++|+|+|.|+|||+|+|.+ +...++|+
T Consensus 383 ~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g~p~~----s~~~~v~I~V~DvNDn~P~f~~--~~~~v~e~ 456 (546)
T 1l3w_A 383 RWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVG----TGTGTLILHVLDVNDNGPVPSP--RVFTMCDQ 456 (546)
T ss_dssp CCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCC----CCCEEEECCBCCCCCSCCCBSC--CCEEECSS
T ss_pred CcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEECCCCCc----EeEEEEEEEEEECCCCcCCccC--ceEEEecC
Confidence 88999999999999999999997 89999999999988764 7889999999999999999984 37889999
Q ss_pred CCCCCceEEEEEEEecCCCCCCCce-EEEEEecCCCCCCCCcCCCCCCCceEEeCCcc---eEEEcccCCcccccEEEEE
Q psy13120 303 TLPGPSFRIMTVQAHDADSLPFNGL-VRYFLKDSGASSGNSQTQGGTGDLFRVNSTTG---DIYLLKSLDREKQAEYLLT 378 (384)
Q Consensus 303 ~~~~~g~~i~~v~a~D~D~~~~~~~-i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG---~i~~~~~ld~e~~~~~~l~ 378 (384)
..+ |. + +.|+|+|.+. ++. ++|+|.+ +....|.| ..+| .+.+ +.+|+|..+.|.|.
T Consensus 457 ~~~--g~-v--v~A~D~D~~~-n~~~~~y~l~~------------~~~~~f~i-~~~g~~~~~~~-~~~d~e~~~~y~l~ 516 (546)
T 1l3w_A 457 NPE--PQ-V--LTISDADIPP-NTYPYKVSLSH------------GSDLTWKA-ELDSKGTSMLL-SPTQQLKKGDYSIY 516 (546)
T ss_dssp SCC--CE-E--EEBCCSSCTT-TTCCCCCBCCS------------CSSSSCBC-CBCTTSSEEEE-BCSSCCCSSCBCCE
T ss_pred CCC--Ce-E--EEEEeCCCCC-CCccEEEEECC------------CCCCCEEE-eccCCceEEEe-cccccccCceEEEE
Confidence 854 65 3 9999999987 665 8999976 33457877 3344 4444 45589999999999
Q ss_pred EEEEcC
Q psy13120 379 LQAMDS 384 (384)
Q Consensus 379 V~a~D~ 384 (384)
|+|+|+
T Consensus 517 V~a~D~ 522 (546)
T 1l3w_A 517 VLLSDA 522 (546)
T ss_dssp EECCSS
T ss_pred EEEEEC
Confidence 999995
No 9
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=3.5e-58 Score=472.22 Aligned_cols=352 Identities=29% Similarity=0.410 Sum_probs=313.6
Q ss_pred CccEEEEEEeCCC----CCcEEEeCCCcEEEEC-ccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCC
Q psy13120 2 NGRLEYSIVSGDD----EEIFTINPSNGTLSNL-KHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAP 76 (384)
Q Consensus 2 ~~~i~Y~i~~~~~----~~~F~id~~tG~i~~~-~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P 76 (384)
|+.|+|+|.++.+ .++|+||+.||.|++. +.||||....|.|+|+|+|+++++ ++++++|+|+|.|+|||+|
T Consensus 298 N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~---~s~~~~v~I~V~DvNDn~P 374 (880)
T 1q55_A 298 NGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAG---LSVEGKAIIQITDANDNAP 374 (880)
T ss_dssp TTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTS---CEEECCEEEEEECCCCCCC
T ss_pred CcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCC---ccceeEEEEEEEeccCCCC
Confidence 6899999998763 4789999999999986 789999999999999999998754 6999999999999999999
Q ss_pred EEccC-ceeEeeCCCCCCcEEEEEEEEeCC--CCCCceEEEEEEcCCCCCeeee--C--cceEEEEceeCCccCCCeEEE
Q psy13120 77 EFITA-NETTIPENSPLNTVVAALKAIDRD--EGQNSYVEYSIINSEATPFSLG--P--VDGLLRVAQKLDREIKSNYTL 149 (384)
Q Consensus 77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D--~~~~~~~~y~l~~~~~~~F~i~--~--~~G~i~~~~~ld~e~~~~~~l 149 (384)
.|... |.+.|+|+ ++|+.|+++.|+|+| .+.|+.++|+|.+...+.|.|+ + .+|.|++.++||||....|.|
T Consensus 375 ~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l 453 (880)
T 1q55_A 375 IFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVL 453 (880)
T ss_dssp CBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEE
T ss_pred CccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEEecCCCceEEEecccCCCcccCCcEEE
Confidence 99988 99999999 999999999999999 6788899999988556789995 2 679999999999999999999
Q ss_pred EEEEEeCCC---CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCC
Q psy13120 150 EIKAKDRGE---PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDN 226 (384)
Q Consensus 150 ~V~a~d~~~---~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~ 226 (384)
+|.|+|++. +.+++.++|+|+|.|+|| +|.|....|.+.|.|+.++|+.|+++.|+|+|.+.++.++|+|.+ +..
T Consensus 454 ~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~-~~~ 531 (880)
T 1q55_A 454 QITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN-DPA 531 (880)
T ss_dssp EECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC-CSS
T ss_pred EEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC-CCC
Confidence 999999863 467899999999999999 999999999999999999999999999999999889999999984 456
Q ss_pred CCeEEECCCcEEEEcccCCcccc----CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCC
Q psy13120 227 HDLTISEDNGLLRIAKNLNYERK----AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNEN 302 (384)
Q Consensus 227 ~~f~i~~~~G~l~~~~~lD~e~~----~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~ 302 (384)
++|.|++.+|.|++.+.||||.. ..|+|+|.|+|.+.++. +++++|+|+|.|+|||+|+|.+. ...++|+
T Consensus 532 ~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D~g~p~~----sst~tv~I~V~DvNDn~P~f~~~--~~~v~E~ 605 (880)
T 1q55_A 532 RWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVG----TGTGTLILHVLDVNDNGPVPSPR--VFTMCDQ 605 (880)
T ss_dssp CCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSSSCC----CCCEEEECCBCCCCCSCCCBSCC--CEEECSS
T ss_pred CCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEEECCCCCc----EeEEEEEEEEEeCCCCCCCccCc--ceEEecC
Confidence 89999999999999999999997 89999999999987764 78899999999999999999843 7889999
Q ss_pred CCCCCceEEEEEEEecCCCCCCCce-EEEEEecCCCCCCCCcCCCCCCCceEE--eCCcceEEEcccCCcccccEEEEEE
Q psy13120 303 TLPGPSFRIMTVQAHDADSLPFNGL-VRYFLKDSGASSGNSQTQGGTGDLFRV--NSTTGDIYLLKSLDREKQAEYLLTL 379 (384)
Q Consensus 303 ~~~~~g~~i~~v~a~D~D~~~~~~~-i~y~l~~~~~~~~~~~~~~~~~~~f~I--d~~tG~i~~~~~ld~e~~~~~~l~V 379 (384)
..+ |. + +.|+|+|.+. |+. ++|+|.. +....|.| +..++.|.+. .++++..+.|.|.|
T Consensus 606 ~~~--g~-v--v~A~D~D~~~-n~~~~~ysl~~------------~~~~~f~i~~~g~~~~l~~~-~~d~~~~~~y~l~V 666 (880)
T 1q55_A 606 NPE--PQ-V--LTISDADIPP-NTYPYKVSLSH------------GSDLTWKAELDSKGTSMLLS-PTQQLKKGDYSIYV 666 (880)
T ss_dssp SCC--CE-E--EEBCCSSCTT-TTCCCCCBCCS------------CSSSSCBCCBCTTSSEEEEB-CSSCCCSSCBCCEE
T ss_pred CCC--Ce-E--EEEecCCCCC-CCceEEEEECC------------CCCCCeEEEcccceeEEEec-cCccccCCEEEEEE
Confidence 854 65 3 9999999988 665 8999976 33456776 4445567664 45799999999999
Q ss_pred EEEcC
Q psy13120 380 QAMDS 384 (384)
Q Consensus 380 ~a~D~ 384 (384)
+|+|+
T Consensus 667 ~a~D~ 671 (880)
T 1q55_A 667 LLSDA 671 (880)
T ss_dssp ECCSS
T ss_pred EEEEC
Confidence 99985
No 10
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=2.1e-53 Score=390.09 Aligned_cols=277 Identities=36% Similarity=0.569 Sum_probs=249.5
Q ss_pred CccEEEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC
Q psy13120 2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA 81 (384)
Q Consensus 2 ~~~i~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~ 81 (384)
|+.|+|+|.+++..++|.||+.+|.|++++.||||....|.|+|+|+|.++++ .++..+.|.|.|.|+|||+|.|...
T Consensus 32 ~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~--~~~~~~~v~I~V~DvNDn~P~F~~~ 109 (322)
T 2a62_A 32 SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNK--PLEPPSEFIIKVQDINDNAPEFLNG 109 (322)
T ss_dssp SCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTCS--EEEEEEEECEECCCCSCSCBCCSSS
T ss_pred CCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCCC--cccceEEEEEEEEecCCCCCccCCC
Confidence 57899999887666799999999999999999999999999999999987532 2578899999999999999999988
Q ss_pred -ceeEeeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCeeeeCcceEEEEc-eeCCccCCCeEEEEEEEEeC
Q psy13120 82 -NETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSIINSEATPFSLGPVDGLLRVA-QKLDREIKSNYTLEIKAKDR 156 (384)
Q Consensus 82 -~~~~v~E~~~~gt~v~~~~a~D~D~---~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~-~~ld~e~~~~~~l~V~a~d~ 156 (384)
|.+.|+|++++|+.++++.|+|+|. |.|+.++|+|.++. +.|.|++.+|.|++. +.||||....|.|+|.|+|+
T Consensus 110 ~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~-~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~ 188 (322)
T 2a62_A 110 PYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ-PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDM 188 (322)
T ss_dssp EEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT-TTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEES
T ss_pred ceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC-CCEEEecCCCEEEecccCCCcccCCeEEEEEEEEEC
Confidence 9999999999999999999999996 77889999999874 689999999999998 89999999999999999999
Q ss_pred CCCC--CceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEE--
Q psy13120 157 GEPS--KSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTIS-- 232 (384)
Q Consensus 157 ~~~~--~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~-- 232 (384)
|+|+ +++.++|+|+|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+.++.++|+|..|+..+.|.|+
T Consensus 189 g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d 268 (322)
T 2a62_A 189 GGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSD 268 (322)
T ss_dssp CSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCC
T ss_pred CCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEecc
Confidence 8874 889999999999999999999999999999999999999999999999998889999999988888899999
Q ss_pred --CCCcEEEEcccCCccccCeEEEEEEEEECCCCCcc---eeeeeEEEEEEEEe
Q psy13120 233 --EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEE---RIRFDTATVSILVS 281 (384)
Q Consensus 233 --~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~---~~~~~~~~v~i~V~ 281 (384)
+.+|.|++.++||||....|.|+|+|+|.+.++.. ..++++++|.|.|.
T Consensus 269 ~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 269 AQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIVVE 322 (322)
T ss_dssp TTTSEEEEEBCSCCCCSSCCEEEEEEEEECCCSSCTTSSCCCCCCCCEEEEEEC
T ss_pred CCCceEEEEECCcCCcccCCeEEEEEEEEECCCCCccccCCCcccEEEEEEEEC
Confidence 45899999999999999999999999998876531 12357788888873
No 11
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1e-52 Score=385.58 Aligned_cols=283 Identities=33% Similarity=0.491 Sum_probs=254.7
Q ss_pred ceeEeeCC--CCCCcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCC
Q psy13120 82 NETTIPEN--SPLNTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE 158 (384)
Q Consensus 82 ~~~~v~E~--~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~ 158 (384)
..+.|.|+ .+.|+.|+++. +|+|.+ ++.++|+|.++. .+.|.|++.+|.|++.++||||....|.|+|.|+|+++
T Consensus 5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~ 82 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET 82 (322)
T ss_dssp CCEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTT
T ss_pred ceeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCC
Confidence 46789999 88999999986 899987 577999998764 46899999999999999999999999999999999865
Q ss_pred -CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEeCCCCCCeEEECC
Q psy13120 159 -PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISED 234 (384)
Q Consensus 159 -~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~f~i~~~ 234 (384)
+++++.+.++|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|. +.++.++|+|.+++ ..|.|++.
T Consensus 83 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~ 160 (322)
T 2a62_A 83 NKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ--PYFSIEPE 160 (322)
T ss_dssp CSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT--TTEEECTT
T ss_pred CCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC--CCEEEecC
Confidence 4567889999999999999999999999999999999999999999999996 67889999998764 68999999
Q ss_pred CcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEE
Q psy13120 235 NGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMT 313 (384)
Q Consensus 235 ~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~ 313 (384)
+|.|++. +.||||....|.|+|+|+|++.++. .++++++|+|+|.|+|||+|.|.+..|.+.|.|+.. .|+.+++
T Consensus 161 tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~--~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~--~gt~v~~ 236 (322)
T 2a62_A 161 TAIIKTALPNMDREAKEEYLVVIQAKDMGGHSG--GLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVV--LGTAIGR 236 (322)
T ss_dssp TCCEEECSSCCCGGGCSEEEEEEEEEESCSSSS--CCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCS--SCCEEEE
T ss_pred CCEEEecccCCCcccCCeEEEEEEEEECCCCCC--CceeEEEEEEEEEecCCCCCeecCCCceeEeECCCC--CCcEEEE
Confidence 9999998 8999999999999999999987641 137889999999999999999999999999999994 4889999
Q ss_pred EEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEe----CCcceEEEcccCCcccccEEEEEEEEEcC
Q psy13120 314 VQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVN----STTGDIYLLKSLDREKQAEYLLTLQAMDS 384 (384)
Q Consensus 314 v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id----~~tG~i~~~~~ld~e~~~~~~l~V~a~D~ 384 (384)
+.|+|+|.+. |+.++|+|.. ++..++|.|+ +.+|.|+++++||||....|.|+|+|+|+
T Consensus 237 v~A~D~D~g~-n~~i~Y~i~~-----------g~~~~~F~I~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~ 299 (322)
T 2a62_A 237 VKANDQDIGE-NAQSSYDIID-----------GDGTALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANI 299 (322)
T ss_dssp EECCCSSCGG-GTCCEEEEC--------------CCSSBCCBCCTTTSEEEEEBCSCCCCSSCCEEEEEEEEECC
T ss_pred EEEEeCCCCC-CceEEEEEEC-----------CCCCCcEEEeccCCCceEEEEECCcCCcccCCeEEEEEEEEEC
Confidence 9999999987 8899999976 2346899998 46899999999999999999999999984
No 12
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=4.3e-50 Score=368.78 Aligned_cols=272 Identities=25% Similarity=0.427 Sum_probs=230.8
Q ss_pred CccEEEEEEeCCC---------CCcEEEeCCCcEEEECccCCcCCC-----cEEEEEEEEEeCCCCCCCCceeEEEEEEE
Q psy13120 2 NGRLEYSIVSGDD---------EEIFTINPSNGTLSNLKHLDRETK-----SSYNLVVMATDMAKPPQKRLSSTTQVSIV 67 (384)
Q Consensus 2 ~~~i~Y~i~~~~~---------~~~F~id~~tG~i~~~~~lD~E~~-----~~~~l~v~a~d~~~~~~~~~s~~~~v~I~ 67 (384)
|+.+.|+|..+++ ..+|+|++ +|.|++++.||||.. ..|.|+|+|.|++.++ ++++++.|+|.
T Consensus 19 ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~--~~s~~~~v~I~ 95 (316)
T 3ubf_A 19 EGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGI--KYTDNQRVIIL 95 (316)
T ss_dssp TTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC---------CCCEEEEEEEE
T ss_pred CceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCCCC--cccceEEEEEE
Confidence 4556666654433 24688887 999999999999984 5788899998887542 26899999999
Q ss_pred EEeecCCCCEEccC---ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC-CCCCeeeeCcceEEEEceeCCccC
Q psy13120 68 IRDVNDNAPEFITA---NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS-EATPFSLGPVDGLLRVAQKLDREI 143 (384)
Q Consensus 68 V~dvNd~~P~f~~~---~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~ 143 (384)
|.|+|||+|.|... |.+.|+|++++|+.++++.|+|+|.+.+ ++|+|..+ ..++|.|++.+|.|++.++||||.
T Consensus 96 V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~tG~i~~~~~lD~e~ 173 (316)
T 3ubf_A 96 VKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQL 173 (316)
T ss_dssp EECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECTTTCEEEECSSCCCCT
T ss_pred EEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEECCccEEEECCcCCccc
Confidence 99999999999876 5889999999999999999999999887 99999865 567999999999999999999999
Q ss_pred CCeEEEEEEEEeCCC----CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEE
Q psy13120 144 KSNYTLEIKAKDRGE----PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYT 219 (384)
Q Consensus 144 ~~~~~l~V~a~d~~~----~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~ 219 (384)
...|.|+|.|+|+++ +++++.+.++|.|.| |||+|.|....|.+.|+|+.++|+.|+++.|+|+| ++.++|+
T Consensus 174 ~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~ 249 (316)
T 3ubf_A 174 DMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYT 249 (316)
T ss_dssp TCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEE
T ss_pred CcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEE
Confidence 999999999999875 457888999999999 99999999999999999999999999999999998 6789999
Q ss_pred EE-eCCCCCCeEEECCCcEEEEcccCCcccc---CeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCC
Q psy13120 220 II-SGDDNHDLTISEDNGLLRIAKNLNYERK---AQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNY 287 (384)
Q Consensus 220 i~-~~~~~~~f~i~~~~G~l~~~~~lD~e~~---~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~ 287 (384)
|. .++..++|.|++.+|.|++.++||||.. ..|.|+|+|+|.+++ ++++++|+|+|.|+||||
T Consensus 250 i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~dd~g~-----~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 250 LKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG-----FSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp EEEESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEESSSS-----CEEEEEEEEEEECC----
T ss_pred EEcCCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEEECCCC-----CEEEEEEEEEEEecCCCC
Confidence 98 6788899999999999999999999998 799999999953333 278999999999999975
No 13
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=5.8e-48 Score=354.59 Aligned_cols=268 Identities=22% Similarity=0.328 Sum_probs=222.7
Q ss_pred EEEEEEEeCCCCCCceEEEEEEcCC----------CCCeeeeCcceEEEEceeCCccCC-----CeEEEEEEEEeCCCC-
Q psy13120 96 VAALKAIDRDEGQNSYVEYSIINSE----------ATPFSLGPVDGLLRVAQKLDREIK-----SNYTLEIKAKDRGEP- 159 (384)
Q Consensus 96 v~~~~a~D~D~~~~~~~~y~l~~~~----------~~~F~i~~~~G~i~~~~~ld~e~~-----~~~~l~V~a~d~~~~- 159 (384)
+.++.|+|+|.+.++.+.|+|..+. .++|.|++ +|.|++.++||||.. ..|.|+|.|.|++.|
T Consensus 6 ~~~~~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~ 84 (316)
T 3ubf_A 6 TKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGI 84 (316)
T ss_dssp EEEEEEESGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC-------
T ss_pred eEEEEEEecCCCCCceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCCCC
Confidence 4455555555555555555554332 35799998 999999999999984 478888899998765
Q ss_pred CCceeEEEEEEeccCCCCCCceeccc--eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcE
Q psy13120 160 SKSSRTKFFIRLLDENDNNPIFDSKS--YSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGL 237 (384)
Q Consensus 160 ~~~~~~~v~I~V~dvnd~~P~f~~~~--~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~ 237 (384)
.+++.++|+|.|.|+|||+|.|.... |.+.|+|+.++|+.|+++.|+|+|.+.+ ++|+|..++..+.|.|++.+|.
T Consensus 85 ~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~tG~ 162 (316)
T 3ubf_A 85 KYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGV 162 (316)
T ss_dssp CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECTTTCE
T ss_pred cccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEECCccE
Confidence 56899999999999999999998876 8999999999999999999999998765 9999998878889999999999
Q ss_pred EEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEe
Q psy13120 238 LRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAH 317 (384)
Q Consensus 238 l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~ 317 (384)
|++.++||||....|.|+|+|+|++++...+.+++++.|+|.|.| ||++|+|.+..|.+.|.|+..+ |+.++++.|+
T Consensus 163 i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~--gt~v~~v~A~ 239 (316)
T 3ubf_A 163 VRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKK--DSDIISIKAK 239 (316)
T ss_dssp EEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCT--TCEEEECCEE
T ss_pred EEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCC--CCEEEEEEEE
Confidence 999999999999999999999999864322224678899999999 9999999999999999999944 8899999999
Q ss_pred cCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccc---cEEEEEEEEEc
Q psy13120 318 DADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQ---AEYLLTLQAMD 383 (384)
Q Consensus 318 D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~---~~~~l~V~a~D 383 (384)
|+| ++.++|+|.. .++..++|.|++.+|.|++.++||||.. ..|.|+|+|+|
T Consensus 240 D~D----n~~i~Y~i~~----------~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~d 294 (316)
T 3ubf_A 240 SFA----DREIRYTLKA----------QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE 294 (316)
T ss_dssp CTT----CCCEEEEEEE----------ESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEE
T ss_pred eCC----CCEEEEEEEc----------CCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEEE
Confidence 998 6789999973 1245789999999999999999999998 79999999994
No 14
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=7.7e-46 Score=353.24 Aligned_cols=272 Identities=22% Similarity=0.333 Sum_probs=239.3
Q ss_pred CcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeC--------cceEEEEceeCCccCC---CeEEEEEEEEeCCCC-
Q psy13120 93 NTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGP--------VDGLLRVAQKLDREIK---SNYTLEIKAKDRGEP- 159 (384)
Q Consensus 93 gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~--------~~G~i~~~~~ld~e~~---~~~~l~V~a~d~~~~- 159 (384)
...+.+++|+|+|.|.|+.++|+|.++. ...|.|++ .+|.|++.++||||.. ..|.|.|.|+|.+.+
T Consensus 8 ~~Pv~~v~AtD~D~g~n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~ 87 (419)
T 3ubh_A 8 VRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA 87 (419)
T ss_dssp EEEEEEEEEEGGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCS
T ss_pred ccceEEEEEEcccCCCCceEEEEEecCCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCC
Confidence 3468899999999999999999998763 56788886 7999999999999987 689999999998754
Q ss_pred --CCceeEEEEEEeccCCCCCCceeccc--eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCC
Q psy13120 160 --SKSSRTKFFIRLLDENDNNPIFDSKS--YSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDN 235 (384)
Q Consensus 160 --~~~~~~~v~I~V~dvnd~~P~f~~~~--~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~ 235 (384)
.+++.+.|+|.|.|+|||+|.|.... |.+.|+|++++|+.|+++.|+|+|.+.+ ++|+|..++..+.|.|++.+
T Consensus 88 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~~t 165 (419)
T 3ubh_A 88 GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERS 165 (419)
T ss_dssp SSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECTTT
T ss_pred CCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeCCc
Confidence 56788999999999999999998876 7899999999999999999999998755 99999988888899999999
Q ss_pred cEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEE
Q psy13120 236 GLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQ 315 (384)
Q Consensus 236 G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~ 315 (384)
|.|++.+.||||....|.|+|+|+|++++...+..++++.++|.|.| ||++|.|.+..|.+.|.||..+ |+.++++.
T Consensus 166 G~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~--gt~v~~v~ 242 (419)
T 3ubh_A 166 GVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKK--DSDIISIK 242 (419)
T ss_dssp CEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCT--TCEEEECC
T ss_pred eEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCC--CcEEEEEE
Confidence 99999999999999999999999998764322223678889999999 9999999999999999999954 88999999
Q ss_pred EecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCccccc---EEEEEEEEEc
Q psy13120 316 AHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQA---EYLLTLQAMD 383 (384)
Q Consensus 316 a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~~---~~~l~V~a~D 383 (384)
|+|+| ++.++|+|.. .++..++|.|++.+|.|++.++||||... .|.|+|+|+|
T Consensus 243 A~D~d----n~~i~Ysi~~----------~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~d 299 (419)
T 3ubh_A 243 AKSFA----DREIRYTLKA----------QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE 299 (419)
T ss_dssp EECSS----CCCCEEEEEE----------SSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEEC
T ss_pred EecCC----CCceEEEEec----------CCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEe
Confidence 99998 6789999974 12456899999999999999999999865 7999999995
No 15
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=4.6e-40 Score=284.18 Aligned_cols=202 Identities=32% Similarity=0.506 Sum_probs=177.0
Q ss_pred ceeEeeCCC--CCCcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCC
Q psy13120 82 NETTIPENS--PLNTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE 158 (384)
Q Consensus 82 ~~~~v~E~~--~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~ 158 (384)
+.+.|.|+. |.|+.++++ |+|+|.+ ++.++|+|.++. .+.|.|++.+|.|++.++||||....|.|+|.|+|+++
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~ 83 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDT 83 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCC
Confidence 578899994 578999988 7999988 678999999874 45899999999999999999999999999999999875
Q ss_pred -CCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEeCCCCCCeEEECC
Q psy13120 159 -PSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISED 234 (384)
Q Consensus 159 -~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~f~i~~~ 234 (384)
+++++.+.+.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|. +.++.++|+|.+++ ..|.|++.
T Consensus 84 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~ 161 (215)
T 2a4e_A 84 NRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ--PYFSVEAQ 161 (215)
T ss_dssp CCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST--TTEEECTT
T ss_pred CCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC--CcEEEeCC
Confidence 5678899999999999999999999999999999999999999999999997 77889999999764 58999999
Q ss_pred CcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCc
Q psy13120 235 NGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPV 289 (384)
Q Consensus 235 ~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~ 289 (384)
+|.|++. +.||||....|.|+|+|+|++.+.. .++++++|+|+|.|+||++|.
T Consensus 162 tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~--~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 162 TGIIRTALPNMDREAKEEYHVVIQAKDMGGHMG--GLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp TCEEEECSSCCCSSSCSEEEEEEEEETTTTCTT--CCEEEEEEEEEEEC-------
T ss_pred ccEEEEcccCCCcccCCEEEEEEEEEECCCCCC--CceeEEEEEEEEEECCCCCCC
Confidence 9999998 9999999999999999999987521 137899999999999999995
No 16
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=2.9e-40 Score=285.36 Aligned_cols=204 Identities=30% Similarity=0.486 Sum_probs=185.3
Q ss_pred CCCCEEccC-ce--eEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEE
Q psy13120 73 DNAPEFITA-NE--TTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYT 148 (384)
Q Consensus 73 d~~P~f~~~-~~--~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~ 148 (384)
|++|.|... +. +.|+|++++|+.++++.|+|+|. +.++|+|.++. .++|.|++.+|.|++.++||||....|.
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~ 79 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFT 79 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEE
Confidence 459999987 55 79999999999999999999995 45899998763 4689999999999999999999999999
Q ss_pred EEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCC
Q psy13120 149 LEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHD 228 (384)
Q Consensus 149 l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~ 228 (384)
|+|.|+|+++ ...+.++|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+.++.++|+|.. ..+.
T Consensus 80 l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~--~~~~ 154 (210)
T 3mvs_A 80 VEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQP--PSPF 154 (210)
T ss_dssp EEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESS--CCSS
T ss_pred EEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeC--CCCC
Confidence 9999999865 3678999999999999999999999999999999999999999999999989999999974 3468
Q ss_pred eEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCC
Q psy13120 229 LTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNY 287 (384)
Q Consensus 229 f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~ 287 (384)
|.|++.+|.|++.++||||....|.|+|+|+|+++.+. ++++++|+|+|.|+||+|
T Consensus 155 F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~---~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 155 FAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRP---LSTLANLAIIITDMQDMD 210 (210)
T ss_dssp EEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSC---CEEEEEEEEEEECCCCCC
T ss_pred EEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCC---CEEEEEEEEEEEccCCCC
Confidence 99999999999999999999999999999999985332 488999999999999965
No 17
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-42 Score=303.76 Aligned_cols=210 Identities=15% Similarity=0.081 Sum_probs=184.3
Q ss_pred EEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCC--CceEE------EEEEcCCCCCeeeeCcceEEEEceeCCccCCCeE
Q psy13120 77 EFITA-NETTIPENSPLNTVVAALKAIDRDEGQ--NSYVE------YSIINSEATPFSLGPVDGLLRVAQKLDREIKSNY 147 (384)
Q Consensus 77 ~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~--~~~~~------y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~ 147 (384)
.|... |.+.|+|++++|+.|+++.|+|+|.+. +..+. |++..+..++|.|++.+|.|++.++||||....|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y 81 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSWEKL 81 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESSCBCHHHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECCcCChhHhhhh
Confidence 47777 999999999999999999999999854 33444 5554445678999999999999999999999999
Q ss_pred ------------EEEEEEEeCCCC--CCceeEEEEEEeccCCCCCCc----------eeccceEEEEecCCCCCcEEEEE
Q psy13120 148 ------------TLEIKAKDRGEP--SKSSRTKFFIRLLDENDNNPI----------FDSKSYSASVPENISVGATVLQV 203 (384)
Q Consensus 148 ------------~l~V~a~d~~~~--~~~~~~~v~I~V~dvnd~~P~----------f~~~~~~~~v~E~~~~g~~v~~v 203 (384)
.|+|.|+|++.+ ++++.+.|.|+|.|+|||+|. |....|.+.|+|+.++|+.|+++
T Consensus 82 ~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v 161 (246)
T 2x2u_A 82 SVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFR 161 (246)
T ss_dssp HHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECS
T ss_pred ccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEE
Confidence 999999999887 678899999999999999999 99999999999999999999999
Q ss_pred EEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEE-CCCCCcceeeeeEEEEEEEEee
Q psy13120 204 SATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAED-CGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 204 ~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D-~~~~~~~~~~~~~~~v~i~V~d 282 (384)
.|+|+|.+.++.++|+|.+++ ...|.|++.+|.|++.++||||....|.|+|.|+| .++++ ++++++|+|+|.|
T Consensus 162 ~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~----~ss~~~v~I~V~D 236 (246)
T 2x2u_A 162 LLPVQFLCPQISVAYRLLEGE-GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGARE----EVVMVPFPVTVYD 236 (246)
T ss_dssp CHHHHHHCTTSCEEEEEESCT-TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CC----EEEEEEEEEEEEC
T ss_pred EEEcCCCCCCcEEEEEEccCC-CCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCc----ceEEEEEEEEEEE
Confidence 999999999999999999665 67899999999999999999999999999999998 44444 4889999999999
Q ss_pred cCCCCCccc
Q psy13120 283 INDNYPVFL 291 (384)
Q Consensus 283 vNd~~P~f~ 291 (384)
+|||+|+|.
T Consensus 237 vNDn~P~F~ 245 (246)
T 2x2u_A 237 EDDSAPEFE 245 (246)
T ss_dssp SSCCSCCCC
T ss_pred eCCCCCccC
Confidence 999999996
No 18
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=8.5e-38 Score=270.36 Aligned_cols=198 Identities=33% Similarity=0.485 Sum_probs=181.0
Q ss_pred eeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCC
Q psy13120 83 ETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRG 157 (384)
Q Consensus 83 ~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~ 157 (384)
.++|+|+++ |+.++.+.+.|.|.+.++.++|+|.++. .+.|.|++.+|.|++.++||||....|.|+|.|+|.+
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 678999998 8888899999999888999999999763 4789999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC--CCCceEEEEEEeCC----CCCCeEE
Q psy13120 158 EPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD--GINGRVRYTIISGD----DNHDLTI 231 (384)
Q Consensus 158 ~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~--~~~~~i~y~i~~~~----~~~~f~i 231 (384)
++++++.+.|+|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|. +.++.++|+|.+++ ..+.|.|
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (215)
T 2qvi_A 85 GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTI 164 (215)
T ss_dssp TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEE
T ss_pred CCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEE
Confidence 99999999999999999999999999999999999999999999999999998 67899999999876 4678999
Q ss_pred ECCCcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120 232 SEDNGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 232 ~~~~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d 282 (384)
++.+|.|++. ++||||....|.|+|+|+|+++++.. .++++++|+|+|.|
T Consensus 165 d~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~-~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 165 NNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTY-GLSNTATAVITVTD 215 (215)
T ss_dssp CTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTT-SCCCEEEEEEEECC
T ss_pred cCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCC-CcceEEEEEEEEEC
Confidence 9999999995 78999999999999999999876210 13789999999986
No 19
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=3.2e-37 Score=266.39 Aligned_cols=176 Identities=32% Similarity=0.552 Sum_probs=156.2
Q ss_pred CccEEEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC
Q psy13120 2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA 81 (384)
Q Consensus 2 ~~~i~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~ 81 (384)
|+.|+|+|.+++...+|+||+.+|.|++++.||||....|.|+|+|+|.++++ ++++++.|.|.|.|+|||+|.|...
T Consensus 33 n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~--~~~~~~~v~I~V~DvNDn~P~F~~~ 110 (215)
T 2a4e_A 33 DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTNR--PLEPPSEFIVKVQDINDNPPEFLHE 110 (215)
T ss_dssp SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCC--EEEEEEEEEEEEECCCCCCCEESSS
T ss_pred CCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCCCC--cccccEEEEEEEeeCCCCCCCccCC
Confidence 57899999887666799999999999999999999999999999999997532 2688899999999999999999987
Q ss_pred -ceeEeeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCeeeeCcceEEEEc-eeCCccCCCeEEEEEEEEeC
Q psy13120 82 -NETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSIINSEATPFSLGPVDGLLRVA-QKLDREIKSNYTLEIKAKDR 156 (384)
Q Consensus 82 -~~~~v~E~~~~gt~v~~~~a~D~D~---~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~-~~ld~e~~~~~~l~V~a~d~ 156 (384)
|.+.|+|++++|+.|+++.|+|+|. |.|+.++|+|.++. +.|.|++.+|.|+++ ++||||....|.|+|.|+|.
T Consensus 111 ~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~-~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~ 189 (215)
T 2a4e_A 111 IYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ-PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDM 189 (215)
T ss_dssp SEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST-TTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETT
T ss_pred ceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC-CcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEEC
Confidence 9999999999999999999999997 78889999999874 689999999999999 99999999999999999999
Q ss_pred CCC--CCceeEEEEEEeccCCCCCCc
Q psy13120 157 GEP--SKSSRTKFFIRLLDENDNNPI 180 (384)
Q Consensus 157 ~~~--~~~~~~~v~I~V~dvnd~~P~ 180 (384)
|+| ++++.++|+|+|.|+|||+|+
T Consensus 190 g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 190 GGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp TTCTTCCEEEEEEEEEEEC-------
T ss_pred CCCCCCceeEEEEEEEEEECCCCCCC
Confidence 876 588999999999999999995
No 20
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=9.9e-37 Score=263.91 Aligned_cols=193 Identities=33% Similarity=0.490 Sum_probs=177.1
Q ss_pred eeEeeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEe
Q psy13120 83 ETTIPENSP--LNTVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKD 155 (384)
Q Consensus 83 ~~~v~E~~~--~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d 155 (384)
.++|+|+.+ .|+.++++.| |.|. ++.++|+|.+.. .++|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 82 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVS 82 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEe
Confidence 688999998 6788999998 7765 778999999853 34899999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCC---CCceEEEEEEeCC----CCCC
Q psy13120 156 RGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDG---INGRVRYTIISGD----DNHD 228 (384)
Q Consensus 156 ~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~---~~~~i~y~i~~~~----~~~~ 228 (384)
.+++++++.+.++|.|.|+|||+|.|....|.+.|.|+.++|+.|+++.|+|+|.+ .++.++|+|.+++ ..+.
T Consensus 83 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~ 162 (213)
T 3qrb_A 83 SNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNM 162 (213)
T ss_dssp TTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCS
T ss_pred CCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCe
Confidence 99988999999999999999999999999999999999999999999999999998 7899999998765 4568
Q ss_pred eEEECCCcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120 229 LTISEDNGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 229 f~i~~~~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d 282 (384)
|.|++.+|.|++. +.||||....|.|+|+|+|.+.++. +++++|+|+|.|
T Consensus 163 F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~----s~t~~v~I~V~D 213 (213)
T 3qrb_A 163 FTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGL----STTAKAVITVKD 213 (213)
T ss_dssp EEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSC----EEEEEEEEEEEC
T ss_pred EEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCc----eEEEEEEEEEEC
Confidence 9999999999997 7899999999999999999887764 889999999986
No 21
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.4e-35 Score=254.38 Aligned_cols=190 Identities=34% Similarity=0.474 Sum_probs=173.2
Q ss_pred ceeEeeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCC
Q psy13120 82 NETTIPENSPLN--TVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE 158 (384)
Q Consensus 82 ~~~~v~E~~~~g--t~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~ 158 (384)
..+.|+||.+.| ..++++. +|+|.+.+ +|+|.++. .++|.|++.+|.|++.++||||....|.|+|.|+|++.
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~ 80 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRN 80 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTT
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCC
Confidence 468999999988 8888988 89998766 99999874 45899999999999999999999999999999999987
Q ss_pred C-CCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEeCCCCCCeEEECC
Q psy13120 159 P-SKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISED 234 (384)
Q Consensus 159 ~-~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~f~i~~~ 234 (384)
| ++++.+.++|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|. +.++.++|+|.+++ ..|.|+ .
T Consensus 81 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~I~-~ 157 (203)
T 3ppe_A 81 NRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN--EYFTVD-D 157 (203)
T ss_dssp TEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST--TTEEEC-T
T ss_pred CCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC--CcEEEe-C
Confidence 6 678899999999999999999999999999999999999999999999994 67889999999765 489999 9
Q ss_pred CcEEEEc-ccCCccccCeEEEEEEEEEC-CCCCcceeeeeEEEEEEEEee
Q psy13120 235 NGLLRIA-KNLNYERKAQYSLTIQAEDC-GGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 235 ~G~l~~~-~~lD~e~~~~~~l~V~a~D~-~~~~~~~~~~~~~~v~i~V~d 282 (384)
+|.|++. ++||||....|.|+|+|+|+ +.++ ++++++|+|+|.|
T Consensus 158 tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~----~s~t~~v~I~V~D 203 (203)
T 3ppe_A 158 SGVIFTARADLDRESQSAYEIIVKAKDALGLTG----ESSTATVIIRLTD 203 (203)
T ss_dssp TSEEEESCSCCCTTTCSEEEEEEEEEETTCCCC----SSSEEEEEEEEEC
T ss_pred CeEEEECCcCCCcccCCEEEEEEEEEeCCCCCC----CeEEEEEEEEEEC
Confidence 9999998 99999999999999999998 4444 3789999999986
No 22
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=4.1e-36 Score=260.96 Aligned_cols=193 Identities=27% Similarity=0.400 Sum_probs=175.0
Q ss_pred ceeEeeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEE
Q psy13120 82 NETTIPENSPLN--TVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAK 154 (384)
Q Consensus 82 ~~~~v~E~~~~g--t~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~ 154 (384)
..+.|+|+.+.| +.++++.|.|+|. .++|+|.+.. .+.|.|++.+|.|++.++||||....|.|+|.|+
T Consensus 6 ~~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 81 (218)
T 3k5r_A 6 SPILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT 81 (218)
T ss_dssp CCEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CcEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEE
Confidence 478999999988 8899999988775 4899998642 4789999999999999999999999999999999
Q ss_pred eCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC--CCCceEEEEEEeCCCC----CC
Q psy13120 155 DRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD--GINGRVRYTIISGDDN----HD 228 (384)
Q Consensus 155 d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~--~~~~~i~y~i~~~~~~----~~ 228 (384)
|.+++++++.+.|+|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|. +.++.++|+|.++... +.
T Consensus 82 D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~ 161 (218)
T 3k5r_A 82 DASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNM 161 (218)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCS
T ss_pred ECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCE
Confidence 99998899999999999999999999999999999999999999999999999998 6789999999976543 67
Q ss_pred eEEECCCcEEEEc---ccCCccc--cCeEEEEEEEEECC--CCCcceeeeeEEEEEEEEee
Q psy13120 229 LTISEDNGLLRIA---KNLNYER--KAQYSLTIQAEDCG--GDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 229 f~i~~~~G~l~~~---~~lD~e~--~~~~~l~V~a~D~~--~~~~~~~~~~~~~v~i~V~d 282 (384)
|.|++.+|.|++. +.||||. ...|.|.|+|+|++ .++. +++++|+|+|.|
T Consensus 162 F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~----sst~~v~I~V~D 218 (218)
T 3k5r_A 162 FYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGL----TGTATATIVIDD 218 (218)
T ss_dssp EEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTC----EEEEEEEEEEEC
T ss_pred EEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCe----eEEEEEEEEEEC
Confidence 9999999999987 6999999 67999999999998 5543 889999999986
No 23
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=3.6e-36 Score=259.66 Aligned_cols=183 Identities=28% Similarity=0.474 Sum_probs=168.3
Q ss_pred CCCCceeccceE--EEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEE
Q psy13120 176 DNNPIFDSKSYS--ASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYS 253 (384)
Q Consensus 176 d~~P~f~~~~~~--~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~ 253 (384)
|++|.|....|. +.|+|++++|+.|+++.|+|+|. +.+.|+|.+++..++|.|++.+|.|++.++||||....|.
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~ 79 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFT 79 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEE
Confidence 459999999887 79999999999999999999994 4689999866666789999999999999999999999999
Q ss_pred EEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEe
Q psy13120 254 LTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLK 333 (384)
Q Consensus 254 l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~ 333 (384)
|+|.|+|+++ ..+++|+|+|.|+|||+|.|.+..|.+.|.|+.. .|+.++++.|+|+|.+. ++.++|+|.
T Consensus 80 l~v~a~D~~~-------~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~--~gt~v~~v~A~D~D~g~-n~~v~Y~i~ 149 (210)
T 3mvs_A 80 VEFSVSDHQG-------VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTP--VGTPIFIVNATDPDLGA-GGSVLYSFQ 149 (210)
T ss_dssp EEEEEECSSC-------EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCC--TTCEEEECCEECCSSGG-GGCEEEEES
T ss_pred EEEEEEeCCC-------CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCC--CCCEEEEEEEEeCCCCC-CceEEEEEe
Confidence 9999999875 3568999999999999999999999999999994 48899999999999988 899999997
Q ss_pred cCCCCCCCCcCCCCCCCceEEeCCcceEEEcccCCcccccEEEEEEEEEcC
Q psy13120 334 DSGASSGNSQTQGGTGDLFRVNSTTGDIYLLKSLDREKQAEYLLTLQAMDS 384 (384)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~~ld~e~~~~~~l~V~a~D~ 384 (384)
+ ..++|.|++.+|.|+++++||||....|.|+|+|+|+
T Consensus 150 ~-------------~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~ 187 (210)
T 3mvs_A 150 P-------------PSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQ 187 (210)
T ss_dssp S-------------CCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEEC
T ss_pred C-------------CCCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEEC
Confidence 5 3579999999999999999999999999999999995
No 24
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=1.9e-36 Score=260.82 Aligned_cols=195 Identities=34% Similarity=0.544 Sum_probs=169.0
Q ss_pred ceeEeeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcCCC-CCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCC-
Q psy13120 82 NETTIPENSPLN--TVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRG- 157 (384)
Q Consensus 82 ~~~~v~E~~~~g--t~v~~~~a~D~D~~~~~~~~y~l~~~~~-~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~- 157 (384)
..+.|+|+.+.+ +.++++ |+|+|.+ ++.++|+|.++.. ++|.|++.+|.|++.++||||....|.|+|.|+|++
T Consensus 5 ~~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~ 82 (207)
T 3lnd_A 5 NQFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRT 82 (207)
T ss_dssp CCEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSS
T ss_pred cccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCC
Confidence 357899998855 588888 8999998 5679999987754 589999999999999999999999999999999987
Q ss_pred CCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEeCCCCCCeEEECC
Q psy13120 158 EPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDD---GINGRVRYTIISGDDNHDLTISED 234 (384)
Q Consensus 158 ~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~---~~~~~i~y~i~~~~~~~~f~i~~~ 234 (384)
++++++.+.++|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|. +.++.++|+|..++ ..|.|++.
T Consensus 83 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~Id~~ 160 (207)
T 3lnd_A 83 GRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVESE 160 (207)
T ss_dssp CCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG--GGEEECTT
T ss_pred CCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC--CCEEEcCC
Confidence 46788899999999999999999999999999999999999999999999998 77889999999764 48999999
Q ss_pred CcEEEEc-ccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120 235 NGLLRIA-KNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 235 ~G~l~~~-~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d 282 (384)
+|.|++. +.||||....|.|+|+|+|++.+.. .++++++|+|+|.|
T Consensus 161 tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~--~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 161 TGIIKTALLNMDRENREQYQVVIQAKDMGGQMG--GLSGTTTVNITLTD 207 (207)
T ss_dssp TCEEEECCSSCCC--CCEEEEEEEEESGGGCTT--CBEEEEEEEEEEEC
T ss_pred CcEEEECcccCCcccCCEEEEEEEEEECCCCCC--CcEeEEEEEEEEeC
Confidence 9999999 9999999999999999999886521 13789999999986
No 25
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=1.4e-34 Score=250.39 Aligned_cols=169 Identities=28% Similarity=0.403 Sum_probs=156.1
Q ss_pred CccEEEEEEeC----CCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120 2 NGRLEYSIVSG----DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE 77 (384)
Q Consensus 2 ~~~i~Y~i~~~----~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~ 77 (384)
|+.|+|+|.++ ++.++|.|++.+|.|++++.||||....|.|+|+|+|.++++ +++++.|.|.|.|+|||+|.
T Consensus 31 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~---~~~~~~v~I~V~DvNDn~P~ 107 (213)
T 3qrb_A 31 ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEA---VEDPMEIVITVTDQNDNRPE 107 (213)
T ss_dssp TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCB---CSCCEEEEEEEECCSCCCCE
T ss_pred CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeCCCCc---ccceEEEEEEEEEccCCCCc
Confidence 67899999874 344699999999999999999999999999999999998765 57889999999999999999
Q ss_pred EccC-ceeEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcC-----CCCCeeeeCcceEEEEc-eeCCccCCCeE
Q psy13120 78 FITA-NETTIPENSPLNTVVAALKAIDRDEG---QNSYVEYSIINS-----EATPFSLGPVDGLLRVA-QKLDREIKSNY 147 (384)
Q Consensus 78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~---~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~-~~ld~e~~~~~ 147 (384)
|... |.+.|+|+.++|+.++++.|+|+|.+ .|+.++|+|.++ ..+.|.|++.+|.|++. ++||||....|
T Consensus 108 F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y 187 (213)
T 3qrb_A 108 FTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTY 187 (213)
T ss_dssp ESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCEE
T ss_pred cCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCceE
Confidence 9988 99999999999999999999999998 789999999875 24689999999999997 79999999999
Q ss_pred EEEEEEEeCCCCCCceeEEEEEEecc
Q psy13120 148 TLEIKAKDRGEPSKSSRTKFFIRLLD 173 (384)
Q Consensus 148 ~l~V~a~d~~~~~~~~~~~v~I~V~d 173 (384)
.|.|.|+|.|+|++++.++++|+|.|
T Consensus 188 ~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 188 TLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp EEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 99999999999999999999999986
No 26
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=268.85 Aligned_cols=174 Identities=20% Similarity=0.218 Sum_probs=153.0
Q ss_pred EEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEE------------EEEEEEEeCCCCCCCCceeEEEEEEEEEeecCC
Q psy13120 7 YSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSY------------NLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDN 74 (384)
Q Consensus 7 Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~------------~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~ 74 (384)
|+|..+ ..++|.||+.+|.|++++.||||....| .|+|.|+|.+.+. ..+++++.|.|.|.|+|||
T Consensus 48 y~i~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~-~~~~~~~~v~I~V~DvNDn 125 (246)
T 2x2u_A 48 YRTRLH-ENNWIRIQEDTGLLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLRE-GECQWPGCARVYFSFFNTS 125 (246)
T ss_dssp GGCEEE-ECCSEEECTTTCEEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC--------CCCTTTEEEEEEEEESSC
T ss_pred eeccCC-CCCEEEECCCcEEEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCC-CcccceEEEEEEEEECCCC
Confidence 555443 4478999999999999999999999999 9999999998752 1257889999999999999
Q ss_pred CCE----------EccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccC
Q psy13120 75 APE----------FITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREI 143 (384)
Q Consensus 75 ~P~----------f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~ 143 (384)
+|. |... |.+.|+|+.++|+.++++.|+|+|.+.|+.++|+|.++..++|.|++.+|.|++.++||||.
T Consensus 126 ~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~ 205 (246)
T 2x2u_A 126 FPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQ 205 (246)
T ss_dssp CCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTT
T ss_pred CCccccccccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccc
Confidence 999 9987 99999999999999999999999999999999999988778999999999999999999999
Q ss_pred CCeEEEEEEEEe-CCCCCCceeEEEEEEeccCCCCCCcee
Q psy13120 144 KSNYTLEIKAKD-RGEPSKSSRTKFFIRLLDENDNNPIFD 182 (384)
Q Consensus 144 ~~~~~l~V~a~d-~~~~~~~~~~~v~I~V~dvnd~~P~f~ 182 (384)
...|.|+|.|+| .|+|+++++++|+|+|.|+|||+|.|.
T Consensus 206 ~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 206 REKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp CSEEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred cceEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 999999999998 566889999999999999999999994
No 27
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=2.1e-34 Score=249.03 Aligned_cols=169 Identities=33% Similarity=0.464 Sum_probs=156.4
Q ss_pred CccEEEEEEeCC----CCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCE
Q psy13120 2 NGRLEYSIVSGD----DEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPE 77 (384)
Q Consensus 2 ~~~i~Y~i~~~~----~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~ 77 (384)
|+.|+|+|.+++ +.++|.|++.+|.|++++.||||....|.|+|+|+|.++++ +++++.|.|.|.|+|||+|.
T Consensus 31 n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~---~~~~~~v~I~V~DvNDn~P~ 107 (215)
T 2qvi_A 31 NLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQ---VENPIDIVINVIDMNDNRPE 107 (215)
T ss_dssp TSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCC---CEEEEEEEEEEECCCCCCCB
T ss_pred CceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECCCCc---eeeeEEEEEEEeECCCCCCc
Confidence 689999999764 35789999999999999999999999999999999998865 68899999999999999999
Q ss_pred EccC-ceeEeeCCCCCCcEEEEEEEEeCCC--CCCceEEEEEEcCC-----CCCeeeeCcceEEEEc-eeCCccCCCeEE
Q psy13120 78 FITA-NETTIPENSPLNTVVAALKAIDRDE--GQNSYVEYSIINSE-----ATPFSLGPVDGLLRVA-QKLDREIKSNYT 148 (384)
Q Consensus 78 f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~--~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~-~~ld~e~~~~~~ 148 (384)
|... |.+.|+|++++|+.++++.|+|+|. +.|+.++|+|.++. .+.|.|++.+|.|++. ++||||....|.
T Consensus 108 F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~ 187 (215)
T 2qvi_A 108 FLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYT 187 (215)
T ss_dssp CSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSEEE
T ss_pred ccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCeEE
Confidence 9988 9999999999999999999999998 68999999999874 5789999999999995 799999999999
Q ss_pred EEEEEEeCCCC---CCceeEEEEEEecc
Q psy13120 149 LEIKAKDRGEP---SKSSRTKFFIRLLD 173 (384)
Q Consensus 149 l~V~a~d~~~~---~~~~~~~v~I~V~d 173 (384)
|.|.|+|.|++ ++++.++|+|+|.|
T Consensus 188 l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 188 LIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp EEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 99999999887 78999999999986
No 28
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=4.2e-33 Score=238.88 Aligned_cols=164 Identities=34% Similarity=0.516 Sum_probs=152.5
Q ss_pred EEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC-cee
Q psy13120 6 EYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA-NET 84 (384)
Q Consensus 6 ~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~-~~~ 84 (384)
+|+|.++++.++|+|++.+|.|++++.||||....|.|+|+|+|.++++ ++++++.|.|.|.|+|||+|.|... |.+
T Consensus 34 ~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~--~~~~~~~v~I~V~DvNDn~P~F~~~~y~~ 111 (203)
T 3ppe_A 34 MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNR--SLEPPSKFIIKVSDINDNAPIFVQKIFNG 111 (203)
T ss_dssp EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTTE--ECSCCEEEEEEEECCCCCCCEESCSEEEE
T ss_pred EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCCC--cccceEEEEEEEcCCCCCCCCccCCccEE
Confidence 9999988887899999999999999999999999999999999998752 2578899999999999999999988 999
Q ss_pred EeeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCeeeeCcceEEEEc-eeCCccCCCeEEEEEEEEeC-CCC
Q psy13120 85 TIPENSPLNTVVAALKAIDRDE---GQNSYVEYSIINSEATPFSLGPVDGLLRVA-QKLDREIKSNYTLEIKAKDR-GEP 159 (384)
Q Consensus 85 ~v~E~~~~gt~v~~~~a~D~D~---~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~-~~ld~e~~~~~~l~V~a~d~-~~~ 159 (384)
.|+|+.++|+.++++.|+|+|. +.|+.++|+|.++. ..|.|+ .+|.|++. ++||||....|.|.|.|+|. |.|
T Consensus 112 ~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~-~~F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p 189 (203)
T 3ppe_A 112 SVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN-EYFTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLT 189 (203)
T ss_dssp EEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST-TTEEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCC
T ss_pred EEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC-CcEEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCC
Confidence 9999999999999999999994 77889999999875 589999 89999999 99999999999999999998 677
Q ss_pred CCceeEEEEEEecc
Q psy13120 160 SKSSRTKFFIRLLD 173 (384)
Q Consensus 160 ~~~~~~~v~I~V~d 173 (384)
+++++++|+|+|.|
T Consensus 190 ~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 190 GESSTATVIIRLTD 203 (203)
T ss_dssp CSSSEEEEEEEEEC
T ss_pred CCeEEEEEEEEEEC
Confidence 89999999999986
No 29
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=3.6e-33 Score=242.42 Aligned_cols=168 Identities=29% Similarity=0.432 Sum_probs=153.4
Q ss_pred ccEEEEEEeC----CCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEE
Q psy13120 3 GRLEYSIVSG----DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEF 78 (384)
Q Consensus 3 ~~i~Y~i~~~----~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f 78 (384)
..++|+|.++ ++.++|.|++.+|.|++++.||||....|.|+|+|+|.++++ +++++.|.|.|.|+|||+|.|
T Consensus 32 ~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~---~~~~~~v~I~V~DvNDn~P~F 108 (218)
T 3k5r_A 32 EGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKT---LEGPVPLEVIVIDQNDNRPIF 108 (218)
T ss_dssp TTCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSSCE---EEEEEEEEEEEECTTCCCCCC
T ss_pred ceEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCCCc---eeeeEEEEEEEEeCCCCCCcc
Confidence 3789999863 345899999999999999999999999999999999988764 689999999999999999999
Q ss_pred ccC-ceeEeeCCCCCCcEEEEEEEEeCCC--CCCceEEEEEEcCCC-----CCeeeeCcceEEEEc---eeCCccC--CC
Q psy13120 79 ITA-NETTIPENSPLNTVVAALKAIDRDE--GQNSYVEYSIINSEA-----TPFSLGPVDGLLRVA---QKLDREI--KS 145 (384)
Q Consensus 79 ~~~-~~~~v~E~~~~gt~v~~~~a~D~D~--~~~~~~~y~l~~~~~-----~~F~i~~~~G~i~~~---~~ld~e~--~~ 145 (384)
... |.+.|+|++++|+.++++.|+|+|. +.|+.++|+|.++.. ++|.|++.+|.|++. +.||||. ..
T Consensus 109 ~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~ 188 (218)
T 3k5r_A 109 REGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENP 188 (218)
T ss_dssp CSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCS
T ss_pred cCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccCCC
Confidence 887 9999999999999999999999998 678999999997643 679999999999987 6999999 67
Q ss_pred eEEEEEEEEeCC--CCCCceeEEEEEEecc
Q psy13120 146 NYTLEIKAKDRG--EPSKSSRTKFFIRLLD 173 (384)
Q Consensus 146 ~~~l~V~a~d~~--~~~~~~~~~v~I~V~d 173 (384)
.|.|.|.|+|.| .|+++++++|+|+|.|
T Consensus 189 ~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 189 KYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp EEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred eEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 999999999998 7889999999999986
No 30
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=6.5e-34 Score=244.97 Aligned_cols=169 Identities=33% Similarity=0.520 Sum_probs=148.9
Q ss_pred CccEEEEEEeCCCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccC
Q psy13120 2 NGRLEYSIVSGDDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITA 81 (384)
Q Consensus 2 ~~~i~Y~i~~~~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~ 81 (384)
|+.|+|+|.+++..++|+|++.+|.|++++.||||....|.|+|+|+|.++.+ ++++++.|.|.|.|+|||+|.|...
T Consensus 32 ~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~--~~~~~~~v~I~V~DvNDn~P~F~~~ 109 (207)
T 3lnd_A 32 DGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGR--PVEPESEFIIKIHDINDNEPIFTKD 109 (207)
T ss_dssp STTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSCC--CCSCCCCCEEEEECCSCCCCEESCS
T ss_pred CceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCCC--ccccEEEEEEEECccCCCCCccCCC
Confidence 56799999877666799999999999999999999999999999999987422 1578889999999999999999988
Q ss_pred -ceeEeeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCeeeeCcceEEEEc-eeCCccCCCeEEEEEEEEeC
Q psy13120 82 -NETTIPENSPLNTVVAALKAIDRDE---GQNSYVEYSIINSEATPFSLGPVDGLLRVA-QKLDREIKSNYTLEIKAKDR 156 (384)
Q Consensus 82 -~~~~v~E~~~~gt~v~~~~a~D~D~---~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~-~~ld~e~~~~~~l~V~a~d~ 156 (384)
|.+.|+|+.++|+.++++.|+|+|. +.|+.++|+|.++. +.|.|++.+|.|++. ++||||....|.|+|.|+|+
T Consensus 110 ~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~-~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~ 188 (207)
T 3lnd_A 110 VYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ-PYFSVESETGIIKTALLNMDRENREQYQVVIQAKDM 188 (207)
T ss_dssp EEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG-GGEEECTTTCEEEECCSSCCC--CCEEEEEEEEESG
T ss_pred ceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC-CCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEEC
Confidence 9999999999999999999999998 78889999999874 589999999999999 89999999999999999999
Q ss_pred CCC--CCceeEEEEEEecc
Q psy13120 157 GEP--SKSSRTKFFIRLLD 173 (384)
Q Consensus 157 ~~~--~~~~~~~v~I~V~d 173 (384)
|+| ++++.++|+|+|.|
T Consensus 189 g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 189 GGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp GGCTTCBEEEEEEEEEEEC
T ss_pred CCCCCCcEeEEEEEEEEeC
Confidence 876 78999999999986
No 31
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.98 E-value=2.4e-31 Score=233.13 Aligned_cols=199 Identities=29% Similarity=0.379 Sum_probs=167.1
Q ss_pred ceeEeeCCCCCCcEEEEEEE-EeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEc---eeCCccCCCeEEEEEEEE---
Q psy13120 82 NETTIPENSPLNTVVAALKA-IDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVA---QKLDREIKSNYTLEIKAK--- 154 (384)
Q Consensus 82 ~~~~v~E~~~~gt~v~~~~a-~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~---~~ld~e~~~~~~l~V~a~--- 154 (384)
+.++|+|+++.|+.+..+.+ .|.|.+.++.++|+|.+....+|.|++.+|.+.+. +.||||....|.+.+.+.
T Consensus 22 ~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~~~ 101 (242)
T 4apx_B 22 TIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCV 101 (242)
T ss_dssp EEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEEEE
T ss_pred EEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEEeE
Confidence 56789999999999887544 44555778889999998877899999999999874 679999887665554444
Q ss_pred eCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEE-----EEEEeCCCCCCceEEEEEEeCCCC---
Q psy13120 155 DRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQ-----VSATDLDDGINGRVRYTIISGDDN--- 226 (384)
Q Consensus 155 d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~-----v~a~D~D~~~~~~i~y~i~~~~~~--- 226 (384)
+.. ......+.|+|.|.|+|||+|.|....|.+.|+|+.++|+.|.+ +.|+|+|.+.++.++|+|..++..
T Consensus 102 ~~~-~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~ 180 (242)
T 4apx_B 102 NKK-VGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTS 180 (242)
T ss_dssp ETT-TCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTSTTH
T ss_pred CCC-CCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCccc
Confidence 433 23456778999999999999999999999999999999999976 789999999999999999976553
Q ss_pred -CCeEEEC-CCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120 227 -HDLTISE-DNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 227 -~~f~i~~-~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d 282 (384)
+.|.|+. .+|.|++.+.||||....|.|+|+|+|++.++.. .+++.+.|+|+|+-
T Consensus 181 ~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~-~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 181 NDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNE-RRTTTTTLTVDLEH 237 (242)
T ss_dssp HHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGG-CCEEEEEEEEEEEC
T ss_pred ccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchh-cccCCceEEEEEee
Confidence 3599985 5899999999999999999999999999887642 35778899998874
No 32
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.95 E-value=7.1e-28 Score=211.03 Aligned_cols=184 Identities=23% Similarity=0.296 Sum_probs=148.1
Q ss_pred ceEEEEecCCCCCcEEEEEEEEeC-CCCCCceEEEEEEeCCCCCCeEEECCCcEEEEc---ccCCccccCeEEEEEE---
Q psy13120 185 SYSASVPENISVGATVLQVSATDL-DDGINGRVRYTIISGDDNHDLTISEDNGLLRIA---KNLNYERKAQYSLTIQ--- 257 (384)
Q Consensus 185 ~~~~~v~E~~~~g~~v~~v~a~D~-D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~---~~lD~e~~~~~~l~V~--- 257 (384)
.+.+.|+|+++.|+.+..+.+.+. |.+.+..+.|+|. ++...+|.|++.+|.+.+. +.||||....|.+.+.
T Consensus 21 ~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~-~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~ 99 (242)
T 4apx_B 21 ATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLK-DNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQ 99 (242)
T ss_dssp SEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEE-SCGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEE
T ss_pred eEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEe-cCCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEE
Confidence 356889999999999887555544 4567888999997 5556789999999999874 6799999876655444
Q ss_pred EEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEE-----EEEecCCCCCCCceEEEEE
Q psy13120 258 AEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMT-----VQAHDADSLPFNGLVRYFL 332 (384)
Q Consensus 258 a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~-----v~a~D~D~~~~~~~i~y~l 332 (384)
+.+..... ...+.|+|.|.|+|||+|+|.+..|.+.|.|+..+ |+.+++ +.|+|+|.+. |+.++|+|
T Consensus 100 ~~~~~~~~-----~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~--Gt~v~~~~~~~v~A~D~D~g~-N~~v~Ysi 171 (242)
T 4apx_B 100 CVNKKVGT-----VIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPV--GTTIFTGFSGDNGATDIDDGP-NGQIEYVI 171 (242)
T ss_dssp EEETTTCC-----EEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCT--TCEEECTTTTTTSEECCSSGG-GGCEEEEE
T ss_pred eECCCCCe-----EEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCC--CCEEEEeeecccccccCCCCc-CCceEEEE
Confidence 44443322 45678999999999999999999999999999954 888876 7899999988 99999999
Q ss_pred ecCCCCCCCCcCCCCCCCceEEeC-CcceEEEcccCCcccccEEEEEEEEEcC
Q psy13120 333 KDSGASSGNSQTQGGTGDLFRVNS-TTGDIYLLKSLDREKQAEYLLTLQAMDS 384 (384)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~f~Id~-~tG~i~~~~~ld~e~~~~~~l~V~a~D~ 384 (384)
..... .+...+.|.||+ .+|.|++++.||||....|.|+|+|+|+
T Consensus 172 ~~~~~-------~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~ 217 (242)
T 4apx_B 172 QYNPE-------DPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDR 217 (242)
T ss_dssp ECCTT-------STTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEEC
T ss_pred ecCCC-------CcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEEC
Confidence 86110 001125699995 5999999999999999999999999995
No 33
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=8.2e-28 Score=187.94 Aligned_cols=114 Identities=32% Similarity=0.496 Sum_probs=108.2
Q ss_pred EEEEeecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC---CCCeeeeCcceEEEEceeCCc
Q psy13120 66 IVIRDVNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE---ATPFSLGPVDGLLRVAQKLDR 141 (384)
Q Consensus 66 I~V~dvNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~---~~~F~i~~~~G~i~~~~~ld~ 141 (384)
++|.|+|||+|.|... |.+.|+|+.++|+.++++.|+|+|.|.|+.++|+|.++. .++|.|++.+|.|+++++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 5689999999999988 999999999999999999999999999999999999874 257999999999999999999
Q ss_pred cCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCC
Q psy13120 142 EIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNP 179 (384)
Q Consensus 142 e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P 179 (384)
|....|.|+|.|+|+|.|++++.++|+|.|.|+|||+|
T Consensus 82 E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred ccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 99999999999999999999999999999999999998
No 34
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=4.7e-27 Score=183.62 Aligned_cols=116 Identities=34% Similarity=0.526 Sum_probs=108.0
Q ss_pred EEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCC--CCCeEEECCCcEEEEcccCCc
Q psy13120 169 IRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDD--NHDLTISEDNGLLRIAKNLNY 246 (384)
Q Consensus 169 I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~--~~~f~i~~~~G~l~~~~~lD~ 246 (384)
++|.|+|||+|.|....|.+.|.|+.++|+.|+++.|+|+|.+.++.++|+|.++.. ..+|.|++.+|.|++.++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 468999999999999999999999999999999999999999989999999986543 358999999999999999999
Q ss_pred cccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCC
Q psy13120 247 ERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYP 288 (384)
Q Consensus 247 e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P 288 (384)
|....|.|+|+|+|++.++. +++++|+|+|.|+||++|
T Consensus 82 E~~~~y~l~V~A~D~g~p~~----s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPPK----TDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBTTBC----CEEEEEEEEEECSTTCCC
T ss_pred ccCCEEEEEEEEEECCCCCc----EEEEEEEEEEEeccCCCC
Confidence 99999999999999988764 789999999999999998
No 35
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=2.4e-25 Score=172.23 Aligned_cols=108 Identities=32% Similarity=0.426 Sum_probs=100.5
Q ss_pred EEEEeecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC----CCCCeeeeCcceEEEEceeCC
Q psy13120 66 IVIRDVNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS----EATPFSLGPVDGLLRVAQKLD 140 (384)
Q Consensus 66 I~V~dvNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~----~~~~F~i~~~~G~i~~~~~ld 140 (384)
|+|.|+|||+|.|... |.+.|+|++++|+.++++.|+|+|.+.|+.++|+|.+. ..++|.|++.+|.|+++++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 5789999999999988 99999999999999999999999999999999999863 346799999999999999999
Q ss_pred ccCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCC
Q psy13120 141 REIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDEN 175 (384)
Q Consensus 141 ~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvn 175 (384)
||....|.|+|.|+|+|.|+ +.++|+|.|.|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 99999999999999998865 7899999999997
No 36
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=6.2e-25 Score=169.91 Aligned_cols=110 Identities=32% Similarity=0.489 Sum_probs=101.7
Q ss_pred EEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeC---CCCCCeEEECCCcEEEEcccCC
Q psy13120 169 IRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISG---DDNHDLTISEDNGLLRIAKNLN 245 (384)
Q Consensus 169 I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~---~~~~~f~i~~~~G~l~~~~~lD 245 (384)
|+|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+.++.++|+|.++ +...+|.|++.+|.|++.++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 5689999999999999999999999999999999999999999999999999752 3456899999999999999999
Q ss_pred ccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecC
Q psy13120 246 YERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDIN 284 (384)
Q Consensus 246 ~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvN 284 (384)
||....|.|+|.|+|++.++ ++++|+|+|.|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~------~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTP------ARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSC------EEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCCc------eEEEEEEEEEECC
Confidence 99999999999999998763 5799999999997
No 37
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=2.9e-22 Score=156.82 Aligned_cols=113 Identities=22% Similarity=0.282 Sum_probs=103.2
Q ss_pred CCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeC----CCCCCeEEECCCcEEEEcccCCccccC
Q psy13120 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISG----DDNHDLTISEDNGLLRIAKNLNYERKA 250 (384)
Q Consensus 175 nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~f~i~~~~G~l~~~~~lD~e~~~ 250 (384)
+.+.|.|....|.+.+.|+.++|+.|++|. +|+|.+.++.++|+|.++ +..+.|.|++.+|.|++.++||||...
T Consensus 6 ~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 84 (123)
T 2yqg_A 6 SGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETP 84 (123)
T ss_dssp SCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBS
T ss_pred cccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCc
Confidence 567999999999999999999999999999 699988888999999976 345789999999999999999999999
Q ss_pred eEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccC
Q psy13120 251 QYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLH 292 (384)
Q Consensus 251 ~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~ 292 (384)
.|.|+|.|+|++.+.. ++++.|.|.|.|+|||+|+|.+
T Consensus 85 ~y~l~V~A~D~g~p~~----~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 85 FFLLTGYALDARGNNV----EKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp EEEEEEEEECTTCCEE----EEEECCEEEEECTTCCCCCCCC
T ss_pred eEEEEEEEEECCCCce----EEEEEEEEEEEEcCCCCCEeCC
Confidence 9999999999987754 7889999999999999999975
No 38
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.85 E-value=1.4e-22 Score=158.73 Aligned_cols=111 Identities=24% Similarity=0.278 Sum_probs=102.3
Q ss_pred cCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCC
Q psy13120 72 NDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKS 145 (384)
Q Consensus 72 Nd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~ 145 (384)
+.++|.|... +.+.+.|++++|+.|+++. +|+|.+.|+.++|+|.++ ..+.|.|++.+|.|+++++||||...
T Consensus 6 ~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 84 (123)
T 2yqg_A 6 SGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETP 84 (123)
T ss_dssp SCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBS
T ss_pred cccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCc
Confidence 5789999887 8888888899999999999 699998888999999975 24689999999999999999999999
Q ss_pred eEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceec
Q psy13120 146 NYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDS 183 (384)
Q Consensus 146 ~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~ 183 (384)
.|.|+|.|+|.|.|++++.+.|.|.|.|+|||+|.|.+
T Consensus 85 ~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 85 FFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp EEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred eEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 99999999999999899999999999999999999965
No 39
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.83 E-value=1.5e-20 Score=144.11 Aligned_cols=97 Identities=27% Similarity=0.429 Sum_probs=79.5
Q ss_pred ceeEeeCCCCCCcE--EEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEE
Q psy13120 82 NETTIPENSPLNTV--VAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAK 154 (384)
Q Consensus 82 ~~~~v~E~~~~gt~--v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~ 154 (384)
+.++|+|++++|+. ++++ |.|.+.|+.++|+|.++ ..+.|.|++.+|.|+++++||||....|.|+|.|+
T Consensus 7 ~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 83 (110)
T 1ncg_A 7 PPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAV 83 (110)
T ss_dssp CCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred eeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEE
Confidence 67899999999995 5554 67777899999999974 35789999999999999999999999999999999
Q ss_pred eCCCCCCceeEEEEEEeccCCCCCCce
Q psy13120 155 DRGEPSKSSRTKFFIRLLDENDNNPIF 181 (384)
Q Consensus 155 d~~~~~~~~~~~v~I~V~dvnd~~P~f 181 (384)
|.|.|++++.+.+.|.|.|+|||+|.|
T Consensus 84 D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 84 DINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp CTTSCBCSCCEEEEEEEC---------
T ss_pred ECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 999999999999999999999999987
No 40
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.81 E-value=4.8e-20 Score=141.31 Aligned_cols=98 Identities=26% Similarity=0.333 Sum_probs=77.8
Q ss_pred eEEEEecCCCCCcE--EEEEEEEeCCCCCCceEEEEEEeC----CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEE
Q psy13120 186 YSASVPENISVGAT--VLQVSATDLDDGINGRVRYTIISG----DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAE 259 (384)
Q Consensus 186 ~~~~v~E~~~~g~~--v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~ 259 (384)
|.++|+||.++|+. |+++ |.|.+.++.++|+|.++ +..+.|.|++.+|.|++.++||||....|.|+|.|+
T Consensus 7 ~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 83 (110)
T 1ncg_A 7 PPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAV 83 (110)
T ss_dssp CCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred eeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEE
Confidence 46899999999994 5555 66766788999999863 456789999999999999999999999999999999
Q ss_pred ECCCCCcceeeeeEEEEEEEEeecCCCCCcc
Q psy13120 260 DCGGDTEERIRFDTATVSILVSDINDNYPVF 290 (384)
Q Consensus 260 D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f 290 (384)
|++.++. ++++.|.|+|.|+|||+|+|
T Consensus 84 D~g~p~~----~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 84 DINGNQV----ENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp CTTSCBC----SCCEEEEEEEC---------
T ss_pred ECCCCce----eeEEEEEEEEEECCCCCCCC
Confidence 9988764 78899999999999999997
No 41
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=7.9e-20 Score=142.99 Aligned_cols=106 Identities=22% Similarity=0.233 Sum_probs=91.6
Q ss_pred cceEEEEecCCCCCcEEEEEEEEeCCCCCCceE---EEEEEeCCCCCCeEEECCCcEEEEcccCCcccc----CeEEEEE
Q psy13120 184 KSYSASVPENISVGATVLQVSATDLDDGINGRV---RYTIISGDDNHDLTISEDNGLLRIAKNLNYERK----AQYSLTI 256 (384)
Q Consensus 184 ~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i---~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~----~~~~l~V 256 (384)
..+.++|+|+.++|+.|+++ |+|.|.+. ..+ +|+|.+++..+.|.|++.+|.|++.++||||.. ..|.|+|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v 88 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF 88 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence 44568999999999999999 99988653 334 899998777889999999999999999999999 9999999
Q ss_pred EEEECCCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEE
Q psy13120 257 QAEDCGGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLAL 298 (384)
Q Consensus 257 ~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~ 298 (384)
.|.+.. + ...++|.|.|.|+|||+|+|.+..|.++
T Consensus 89 ~a~~~~-p------~~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 89 QVLLKS-P------VQFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEEETT-T------TEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEECC-C------CeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 999743 2 2478999999999999999999888654
No 42
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.75 E-value=5.7e-18 Score=126.60 Aligned_cols=90 Identities=29% Similarity=0.435 Sum_probs=82.7
Q ss_pred ceeEeeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCCC-CCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCC-
Q psy13120 82 NETTIPENSP--LNTVVAALKAIDRDEGQNSYVEYSIINSEA-TPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRG- 157 (384)
Q Consensus 82 ~~~~v~E~~~--~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~-~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~- 157 (384)
..+.|+||.+ .|+.++++. +|+|.| |+.++|+|.++.. +.|.|++.+|.|++.++||||....|.|+|.|+|.|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~ 83 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRT 83 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCC
Confidence 4678999976 689999999 999999 9999999988643 689999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEEecc
Q psy13120 158 EPSKSSRTKFFIRLLD 173 (384)
Q Consensus 158 ~~~~~~~~~v~I~V~d 173 (384)
+|++++.+.|.|.|.|
T Consensus 84 ~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 84 GRPMEPESEFIIKIQD 99 (99)
T ss_dssp CCBSSCCEEEEEEEEC
T ss_pred CCCcceeEEEEEEEeC
Confidence 5889999999999976
No 43
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.74 E-value=1e-17 Score=125.06 Aligned_cols=90 Identities=27% Similarity=0.416 Sum_probs=80.6
Q ss_pred ceeEeeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCC-CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCC
Q psy13120 82 NETTIPENSP--LNTVVAALKAIDRDEGQNSYVEYSIINSE-ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGE 158 (384)
Q Consensus 82 ~~~~v~E~~~--~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~ 158 (384)
+.++|+||.+ .|+.++++. +|+|.| |+.++|+|.+.. .+.|.|++.+|.|++.++||||....|.|+|.|+|+|.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~ 82 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET 82 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCC
Confidence 5688999985 899999997 999999 999999999874 35799999999999999999999999999999999987
Q ss_pred -CCCceeEEEEEEecc
Q psy13120 159 -PSKSSRTKFFIRLLD 173 (384)
Q Consensus 159 -~~~~~~~~v~I~V~d 173 (384)
|++++.+.|.|.|.|
T Consensus 83 ~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 83 NKPLEPPSEFIIKVQD 98 (98)
T ss_dssp CCBSSCCEEEEEEECC
T ss_pred CCCcceeEEEEEEEEC
Confidence 789999999999986
No 44
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.73 E-value=3.4e-17 Score=122.34 Aligned_cols=91 Identities=24% Similarity=0.332 Sum_probs=81.8
Q ss_pred eEEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECC-
Q psy13120 186 YSASVPENIS--VGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCG- 262 (384)
Q Consensus 186 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~- 262 (384)
+.+.|+||.+ .|+.|+++. +|+|.+ |+.++|+|.++...+.|.|++.+|.|++.++||||....|.|+|.|+|.+
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~ 83 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRT 83 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCC
Confidence 3588999976 689999999 999999 99999999876666789999999999999999999999999999999998
Q ss_pred CCCcceeeeeEEEEEEEEee
Q psy13120 263 GDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 263 ~~~~~~~~~~~~~v~i~V~d 282 (384)
+++. ++.+.|.|+|.|
T Consensus 84 ~p~l----~~~~~v~I~V~D 99 (99)
T 1zvn_A 84 GRPM----EPESEFIIKIQD 99 (99)
T ss_dssp CCBS----SCCEEEEEEEEC
T ss_pred CCCc----ceeEEEEEEEeC
Confidence 4664 778999999986
No 45
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=7.5e-19 Score=137.44 Aligned_cols=103 Identities=22% Similarity=0.203 Sum_probs=88.8
Q ss_pred ceeEeeCCCCCCcEEEEEEEEeCCCCCCceE---EEEEEcC-CCCCeeeeCcceEEEEceeCCccCC----CeEEEEEEE
Q psy13120 82 NETTIPENSPLNTVVAALKAIDRDEGQNSYV---EYSIINS-EATPFSLGPVDGLLRVAQKLDREIK----SNYTLEIKA 153 (384)
Q Consensus 82 ~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~---~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~~----~~~~l~V~a 153 (384)
+.++|+|+.++|+.|+++ |+|.|.+. +.+ +|+|.++ ..++|.|++.+|.|+++++||||.. ..|.|.|.|
T Consensus 13 ~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~a 90 (125)
T 1wyj_A 13 ITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQV 90 (125)
T ss_dssp CCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCEE
T ss_pred EEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEEEE
Confidence 678999999999999999 88888754 234 8999865 4578999999999999999999999 999999999
Q ss_pred EeCCCCCCceeEEEEEEeccCCCCCCceeccceEEE
Q psy13120 154 KDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSAS 189 (384)
Q Consensus 154 ~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~ 189 (384)
.+.. +. ..+.|.|.|.|+|||+|.|....|.++
T Consensus 91 ~~~~--p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 91 LLKS--PV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EETT--TT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EECC--CC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 9843 33 578999999999999999999887654
No 46
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.72 E-value=4.6e-17 Score=121.48 Aligned_cols=91 Identities=29% Similarity=0.325 Sum_probs=79.6
Q ss_pred eEEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCC
Q psy13120 186 YSASVPENIS--VGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGG 263 (384)
Q Consensus 186 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~ 263 (384)
+.++|+||.+ .|+.|+++. +|+|.+ |+.++|+|.++...+.|.|++.+|.|++.++||||....|.|+|.|+|++.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~ 82 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET 82 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCC
Confidence 4688999995 899999997 999999 999999998665667899999999999999999999999999999999986
Q ss_pred -CCcceeeeeEEEEEEEEee
Q psy13120 264 -DTEERIRFDTATVSILVSD 282 (384)
Q Consensus 264 -~~~~~~~~~~~~v~i~V~d 282 (384)
++. ++.++|.|.|.|
T Consensus 83 ~~~l----~~~~~v~I~V~D 98 (98)
T 1zxk_A 83 NKPL----EPPSEFIIKVQD 98 (98)
T ss_dssp CCBS----SCCEEEEEEECC
T ss_pred CCCc----ceeEEEEEEEEC
Confidence 544 778999999976
No 47
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.70 E-value=4.6e-17 Score=121.96 Aligned_cols=88 Identities=22% Similarity=0.340 Sum_probs=80.8
Q ss_pred ceeEeeCCCCC--CcEEEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEE
Q psy13120 82 NETTIPENSPL--NTVVAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAK 154 (384)
Q Consensus 82 ~~~~v~E~~~~--gt~v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~ 154 (384)
..+.|+||.++ |+.++++.|+|+|. .++|+|.+. ..+.|.|++.+|.|++.++||||....|.|+|.|+
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 80 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETT 80 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEE
Confidence 46899999999 99999999999996 589999863 24689999999999999999999999999999999
Q ss_pred eCCCCCCceeEEEEEEecc
Q psy13120 155 DRGEPSKSSRTKFFIRLLD 173 (384)
Q Consensus 155 d~~~~~~~~~~~v~I~V~d 173 (384)
|+|+|++++.+.++|.|.|
T Consensus 81 D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 81 DENGKTIEGPVDLEILVID 99 (99)
T ss_dssp CTTCCEEEEEEEEEEEEEC
T ss_pred ECCCCceeeEEEEEEEEEC
Confidence 9999999999999999986
No 48
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.69 E-value=6.4e-17 Score=122.50 Aligned_cols=89 Identities=25% Similarity=0.355 Sum_probs=79.7
Q ss_pred eeEeeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCC-----CCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEe
Q psy13120 83 ETTIPENSP--LNTVVAALKAIDRDEGQNSYVEYSIINSE-----ATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKD 155 (384)
Q Consensus 83 ~~~v~E~~~--~gt~v~~~~a~D~D~~~~~~~~y~l~~~~-----~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d 155 (384)
.++|+||.+ .|+.++++.| | .+.|+.++|+|.++. .+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 578999998 5889999999 3 356899999999864 35899999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEEeccC
Q psy13120 156 RGEPSKSSRTKFFIRLLDE 174 (384)
Q Consensus 156 ~~~~~~~~~~~v~I~V~dv 174 (384)
+|+|++++.+.|.|.|.|+
T Consensus 87 ~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 87 SNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp TTSCBSSCCEEEEEEEEC-
T ss_pred CCCCceeeEEEEEEEEEeC
Confidence 9999999999999999985
No 49
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.69 E-value=9.8e-17 Score=120.40 Aligned_cols=88 Identities=22% Similarity=0.326 Sum_probs=80.4
Q ss_pred ceeEeeCCCCC--CcEEEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEE
Q psy13120 82 NETTIPENSPL--NTVVAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAK 154 (384)
Q Consensus 82 ~~~~v~E~~~~--gt~v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~ 154 (384)
..+.|+||.+. |+.++++.|+|+|. .++|+|.+. ..+.|.|++.+|.|++.++||||....|.|+|.|+
T Consensus 6 ~~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 81 (100)
T 3k6f_A 6 SPILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETT 81 (100)
T ss_dssp CCEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEE
Confidence 46899999998 89999999999996 489999864 24689999999999999999999999999999999
Q ss_pred eCCCCCCceeEEEEEEecc
Q psy13120 155 DRGEPSKSSRTKFFIRLLD 173 (384)
Q Consensus 155 d~~~~~~~~~~~v~I~V~d 173 (384)
|+|+|++++.++++|.|.|
T Consensus 82 D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 82 DASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp CTTCCEEEEEEEEEEEEEC
T ss_pred ECCCCcccceEEEEEEEEC
Confidence 9999999999999999986
No 50
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.69 E-value=1.4e-16 Score=119.35 Aligned_cols=87 Identities=23% Similarity=0.341 Sum_probs=80.0
Q ss_pred eeEeeCCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcC-----CCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEe
Q psy13120 83 ETTIPENSPLN--TVVAALKAIDRDEGQNSYVEYSIINS-----EATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKD 155 (384)
Q Consensus 83 ~~~v~E~~~~g--t~v~~~~a~D~D~~~~~~~~y~l~~~-----~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d 155 (384)
.+.|+||.+.| +.++++.|+|+|. .++|+|.+. ..+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 81 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD 81 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence 67899999987 8999999999996 599999864 236899999999999999999999999999999999
Q ss_pred CCCCCCceeEEEEEEecc
Q psy13120 156 RGEPSKSSRTKFFIRLLD 173 (384)
Q Consensus 156 ~~~~~~~~~~~v~I~V~d 173 (384)
+|+|++++.+++.|.|.|
T Consensus 82 ~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 82 LSGKIIDGPVRLDISVID 99 (99)
T ss_dssp TTSCEEEEEEEEEEEEEC
T ss_pred CCCCceeeeEEEEEEEEC
Confidence 999999999999999986
No 51
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.68 E-value=1.4e-16 Score=119.27 Aligned_cols=88 Identities=26% Similarity=0.351 Sum_probs=79.2
Q ss_pred EEEEecCCCC--CcEEEEEEEEeCCCCCCceEEEEEEe----CCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEE
Q psy13120 187 SASVPENISV--GATVLQVSATDLDDGINGRVRYTIIS----GDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAED 260 (384)
Q Consensus 187 ~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~i~y~i~~----~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D 260 (384)
.+.|+||.++ |+.|++|.|+|+|. .++|+|.+ ++..+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus 6 ~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 81 (99)
T 3k6d_A 6 SISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTD 81 (99)
T ss_dssp CEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEE
Confidence 4789999999 99999999999995 69999974 34467899999999999999999999999999999999
Q ss_pred CCCCCcceeeeeEEEEEEEEee
Q psy13120 261 CGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 261 ~~~~~~~~~~~~~~~v~i~V~d 282 (384)
+++++. ++.++|+|.|.|
T Consensus 82 ~g~~~l----~~~~~v~I~V~D 99 (99)
T 3k6d_A 82 ENGKTI----EGPVDLEILVID 99 (99)
T ss_dssp TTCCEE----EEEEEEEEEEEC
T ss_pred CCCCce----eeEEEEEEEEEC
Confidence 988764 778999999986
No 52
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.66 E-value=6.1e-16 Score=116.07 Aligned_cols=88 Identities=23% Similarity=0.386 Sum_probs=78.7
Q ss_pred EEEEecCCCC--CcEEEEEEEEeCCCCCCceEEEEEEeC----CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEE
Q psy13120 187 SASVPENISV--GATVLQVSATDLDDGINGRVRYTIISG----DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAED 260 (384)
Q Consensus 187 ~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D 260 (384)
.+.|+||.+. |+.|++|.|+|+|. .++|+|.+. +..+.|.|++.+|.|++.++||||....|.|+|.|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 82 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence 4789999998 89999999999996 599999853 3457899999999999999999999999999999999
Q ss_pred CCCCCcceeeeeEEEEEEEEee
Q psy13120 261 CGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 261 ~~~~~~~~~~~~~~~v~i~V~d 282 (384)
.++++. ++.++|.|.|.|
T Consensus 83 ~g~p~l----~~~~~v~I~V~D 100 (100)
T 3k6f_A 83 ASGKTL----EGPVPLEVIVID 100 (100)
T ss_dssp TTCCEE----EEEEEEEEEEEC
T ss_pred CCCCcc----cceEEEEEEEEC
Confidence 988764 788999999986
No 53
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.66 E-value=8.5e-16 Score=115.10 Aligned_cols=87 Identities=22% Similarity=0.296 Sum_probs=78.0
Q ss_pred EEEecCCCCC--cEEEEEEEEeCCCCCCceEEEEEEeC----CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEEC
Q psy13120 188 ASVPENISVG--ATVLQVSATDLDDGINGRVRYTIISG----DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDC 261 (384)
Q Consensus 188 ~~v~E~~~~g--~~v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~ 261 (384)
+.|+||.+.| +.|++|.|+|+|. .++|+|.+. +..+.|.|++.+|.|++.++||||....|.|+|.|+|.
T Consensus 7 ~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~ 82 (99)
T 3k6i_A 7 ILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDL 82 (99)
T ss_dssp EEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEET
T ss_pred EEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEEC
Confidence 7899999986 8999999999995 799999852 34578999999999999999999999999999999999
Q ss_pred CCCCcceeeeeEEEEEEEEee
Q psy13120 262 GGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 262 ~~~~~~~~~~~~~~v~i~V~d 282 (384)
++++. ++.++|.|.|.|
T Consensus 83 g~~~l----~~~~~v~I~V~D 99 (99)
T 3k6i_A 83 SGKII----DGPVRLDISVID 99 (99)
T ss_dssp TSCEE----EEEEEEEEEEEC
T ss_pred CCCce----eeeEEEEEEEEC
Confidence 88764 788999999986
No 54
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.64 E-value=7.5e-16 Score=116.60 Aligned_cols=90 Identities=27% Similarity=0.398 Sum_probs=78.0
Q ss_pred EEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEeCCC----CCCeEEECCCcEEEEcccCCccccCeEEEEEEEEE
Q psy13120 187 SASVPENIS--VGATVLQVSATDLDDGINGRVRYTIISGDD----NHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAED 260 (384)
Q Consensus 187 ~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~----~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D 260 (384)
.+.|+||.+ .|+.|+++.| |. +.|+.++|+|.+++. .+.|.|++.+|.|++.++||||....|+|+|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d~--g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-NK--DKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-GG--GGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEEC-CC--CCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 367999998 5889999999 33 458899999987653 46899999999999999999999999999999999
Q ss_pred CCCCCcceeeeeEEEEEEEEeec
Q psy13120 261 CGGDTEERIRFDTATVSILVSDI 283 (384)
Q Consensus 261 ~~~~~~~~~~~~~~~v~i~V~dv 283 (384)
++.++. ++.++|.|.|.|+
T Consensus 87 ~g~p~~----~~~~~v~I~V~Dv 105 (105)
T 2omz_B 87 SNGNAV----EDPMEILITVTDQ 105 (105)
T ss_dssp TTSCBS----SCCEEEEEEEEC-
T ss_pred CCCCce----eeEEEEEEEEEeC
Confidence 998775 7789999999986
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.42 E-value=2.8e-14 Score=107.47 Aligned_cols=93 Identities=25% Similarity=0.317 Sum_probs=74.9
Q ss_pred cceEEEEecCCCCCcEEEEEEEEeCCCCCC--ceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccC------eEEEE
Q psy13120 184 KSYSASVPENISVGATVLQVSATDLDDGIN--GRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKA------QYSLT 255 (384)
Q Consensus 184 ~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~--~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~------~~~l~ 255 (384)
..+.++|+|+.++|+.|++| |.|.|...+ ..+.|+|.+++..++|.|++.+|.|++.+.||||... .|.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~ 81 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE 81 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence 34678999999999999999 999885321 2578999877788899999999999999999999852 45555
Q ss_pred EEEEECCCCCcceeeeeEEEEEEEEeecCCC
Q psy13120 256 IQAEDCGGDTEERIRFDTATVSILVSDINDN 286 (384)
Q Consensus 256 V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~ 286 (384)
|.+ . .+ ...+.|.|.|.|+|||
T Consensus 82 v~~--~-~p------~~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 82 VIV--D-RP------LQVFHVEVEVRDINDN 103 (103)
T ss_dssp EEE--T-TT------TEEEEEEEEEECCSCC
T ss_pred EEE--C-CC------CEEEEEEEEEEEcCCC
Confidence 554 2 22 2378999999999996
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.34 E-value=1e-13 Score=104.35 Aligned_cols=92 Identities=20% Similarity=0.250 Sum_probs=71.8
Q ss_pred ceeEeeCCCCCCcEEEEEEEEeCCCCCC--ceEEEEEEcC-CCCCeeeeCcceEEEEceeCCccCC----CeEEEEEEEE
Q psy13120 82 NETTIPENSPLNTVVAALKAIDRDEGQN--SYVEYSIINS-EATPFSLGPVDGLLRVAQKLDREIK----SNYTLEIKAK 154 (384)
Q Consensus 82 ~~~~v~E~~~~gt~v~~~~a~D~D~~~~--~~~~y~l~~~-~~~~F~i~~~~G~i~~~~~ld~e~~----~~~~l~V~a~ 154 (384)
+.++|+|+.++|+.|+++ |.|.|.+.+ ..+.|+|.++ ..++|.|++.+|.|+++++||||.. ..|.+.+.|.
T Consensus 5 ~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v~ 83 (103)
T 1wuz_A 5 IHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVI 83 (103)
T ss_dssp EEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEEE
T ss_pred EEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEEEE
Confidence 567899999999999999 999886422 2478999765 4678999999999999999999975 2334444444
Q ss_pred eCCCCCCceeEEEEEEeccCCCC
Q psy13120 155 DRGEPSKSSRTKFFIRLLDENDN 177 (384)
Q Consensus 155 d~~~~~~~~~~~v~I~V~dvnd~ 177 (384)
.. .| . ..+.|.|.|.|+|||
T Consensus 84 ~~-~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 84 VD-RP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp ET-TT-T-EEEEEEEEEECCSCC
T ss_pred EC-CC-C-EEEEEEEEEEEcCCC
Confidence 43 22 3 478999999999997
No 57
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=96.32 E-value=0.12 Score=42.60 Aligned_cols=117 Identities=16% Similarity=0.146 Sum_probs=63.5
Q ss_pred CCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecCCCCEEccCceeEeeCCCC---CC-cEEEEEEEEeCCCCCCceE
Q psy13120 37 TKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVNDNAPEFITANETTIPENSP---LN-TVVAALKAIDRDEGQNSYV 112 (384)
Q Consensus 37 ~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd~~P~f~~~~~~~v~E~~~---~g-t~v~~~~a~D~D~~~~~~~ 112 (384)
....|+|+++|+|..|. .+....+.|+|.+ ..+|... +..+.+.. .| ..-....|.|.|. .-..+
T Consensus 59 ~~G~htlta~A~D~aGn----~s~s~~v~vtV~~--~~~Ptv~----itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~V 127 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGR----RIESPVTPVLVKV--IVKPTVK----LTAPKSNVVAYGNEFLKITATASDSDG-KISRV 127 (190)
T ss_dssp CSEEEEEEEEEEETTSC----EEECCCEEEEEEC--CCCCEEE----EEECCTTCCCBTTSEEEEEEEEECSSS-CEEEE
T ss_pred CCccEEEEEEEEECCCC----EeeecceeEEecc--CCCCcee----ecCCCCCcEEecCCeEEEEEEEECCCC-cEEEE
Confidence 46789999999999874 2333457777776 4488653 22222211 23 4445677777653 12334
Q ss_pred EEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEec
Q psy13120 113 EYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLL 172 (384)
Q Consensus 113 ~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~ 172 (384)
.|.+.+. ...-+. ++-....... ....|.|+++|+|..+- .+....+.|+|.
T Consensus 128 e~~~dg~---~v~t~t-~~~y~~~~~~---~~G~~tl~a~A~D~aGn-~s~s~~vtvtv~ 179 (190)
T 3pdd_A 128 DFLVDGE---VIGSDR-EAPYEYEWKA---VEGNHEISVIAYDDDDA-ASTPDSVKIFVK 179 (190)
T ss_dssp EEEETTE---EEEEEC-SSSEEEEEEC---CSEEEEEEEEEEETTCC-BCCCEEEEEEEB
T ss_pred EEEECCE---EEeccc-CCCEEEEEec---CCeeEEEEEEEEECCCC-EEecceEEEEEC
Confidence 4444221 111111 1111111111 45789999999997552 234556666665
No 58
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=96.04 E-value=0.31 Score=40.11 Aligned_cols=118 Identities=14% Similarity=0.104 Sum_probs=64.7
Q ss_pred CCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCC---CC-cEEEEEEEEeCCCCCCceEEE
Q psy13120 143 IKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENIS---VG-ATVLQVSATDLDDGINGRVRY 218 (384)
Q Consensus 143 ~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~---~g-~~v~~v~a~D~D~~~~~~i~y 218 (384)
....|.|+++|+|..+- .+....+.|.|.+ ..+|... +..+.+.. .| ..-....|.|.+.. -.++.|
T Consensus 59 ~~G~htlta~A~D~aGn-~s~s~~v~vtV~~--~~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~g~-V~~Ve~ 129 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGR-RIESPVTPVLVKV--IVKPTVK-----LTAPKSNVVAYGNEFLKITATASDSDGK-ISRVDF 129 (190)
T ss_dssp CSEEEEEEEEEEETTSC-EEECCCEEEEEEC--CCCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSSSC-EEEEEE
T ss_pred CCccEEEEEEEEECCCC-EeeecceeEEecc--CCCCcee-----ecCCCCCcEEecCCeEEEEEEEECCCCc-EEEEEE
Confidence 35789999999997652 2222346666665 3477642 33333322 23 44566777776521 123444
Q ss_pred EEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120 219 TIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 219 ~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d 282 (384)
.+. | ....-+. ++-....... ....|.|+++|+|..+.. +.+..|+|+|.+
T Consensus 130 ~~d-g---~~v~t~t-~~~y~~~~~~---~~G~~tl~a~A~D~aGn~-----s~s~~vtvtv~~ 180 (190)
T 3pdd_A 130 LVD-G---EVIGSDR-EAPYEYEWKA---VEGNHEISVIAYDDDDAA-----STPDSVKIFVKQ 180 (190)
T ss_dssp EET-T---EEEEEEC-SSSEEEEEEC---CSEEEEEEEEEEETTCCB-----CCCEEEEEEEBC
T ss_pred EEC-C---EEEeccc-CCCEEEEEec---CCeeEEEEEEEEECCCCE-----EecceEEEEECC
Confidence 442 1 1111111 1111111111 467999999999998875 456778888764
No 59
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=94.89 E-value=1.9 Score=38.11 Aligned_cols=144 Identities=16% Similarity=0.170 Sum_probs=75.3
Q ss_pred CCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCC--CeEEECCCcEEEEccc---------
Q psy13120 175 NDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNH--DLTISEDNGLLRIAKN--------- 243 (384)
Q Consensus 175 nd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~--~f~i~~~~G~l~~~~~--------- 243 (384)
+|+++.|....-...|.|+. |+...+|.-.- +......+.|....|.... -|. +..|.|.....
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEEE
Confidence 35566666666667899986 44444443332 3334556888877664422 232 23455444221
Q ss_pred -C-CccccCeEEEEEEEEECC-CCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEecCC
Q psy13120 244 -L-NYERKAQYSLTIQAEDCG-GDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDAD 320 (384)
Q Consensus 244 -l-D~e~~~~~~l~V~a~D~~-~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~D 320 (384)
+ |-.....-+|.|..++.. +... ......+|+|.| ||++|.|.-..-...|.|+. |...++|.-...-
T Consensus 81 I~dD~~~E~dEtF~v~Ls~p~~~a~l----g~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~----g~~~~~V~Rs~~~ 151 (298)
T 3rb5_A 81 VIDDDVFEEDECFYIRLFNPSEGVKL----AVPMIATVMILD-DDHAGIFAFTDSVFEITESV----GRFELKVMRYSGA 151 (298)
T ss_dssp BCCCSSCCCCEEEEEEEECCCTTCCB----CSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC----CCEEEEEEEESCC
T ss_pred EeCCCCccCcEEEEEEEeCCCCCcEE----CCCceEEEEEec-cccccccccccccEEeecCC----ceEEEEEEEEecC
Confidence 2 211223345555666542 2221 222345555566 46689877655577899986 5566666665543
Q ss_pred CCCCCceEEEEEec
Q psy13120 321 SLPFNGLVRYFLKD 334 (384)
Q Consensus 321 ~~~~~~~i~y~l~~ 334 (384)
.+ .-.+.|...+
T Consensus 152 ~g--~vtV~~~T~d 163 (298)
T 3rb5_A 152 RG--TVIVPYWTEN 163 (298)
T ss_dssp CS--CEEEEEEEEE
T ss_pred CC--CEEEEEEecC
Confidence 32 3467787665
No 60
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=94.36 E-value=2.4 Score=37.39 Aligned_cols=144 Identities=19% Similarity=0.160 Sum_probs=74.6
Q ss_pred cCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCC---CCeeeeCcceEEEEc----------e
Q psy13120 72 NDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA---TPFSLGPVDGLLRVA----------Q 137 (384)
Q Consensus 72 Nd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~---~~F~i~~~~G~i~~~----------~ 137 (384)
+|+++.|... ....|.|+. |+....+.-.. +......+.|...++.+ ..|.- .+|.|... .
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~~--~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFVG--RKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBCC--CEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCccc--cceEEEECCCceEEEEEEE
Confidence 4556677666 677899986 55544444332 33344558888776632 12321 23544432 1
Q ss_pred eCC---ccCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCc
Q psy13120 138 KLD---REIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGING 214 (384)
Q Consensus 138 ~ld---~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~ 214 (384)
-+| +|....|.+.+..-. ++..+......+|+|.| ||.+|.|....-...|.|+. |....+|.-.-.- ...-
T Consensus 81 I~dD~~~E~dEtF~v~Ls~p~-~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~-~g~v 155 (298)
T 3rb5_A 81 VIDDDVFEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGA-RGTV 155 (298)
T ss_dssp BCCCSSCCCCEEEEEEEECCC-TTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCC-CSCE
T ss_pred EeCCCCccCcEEEEEEEeCCC-CCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecC-CCCE
Confidence 122 444455555544321 22233333455566666 46688887766678899985 5665665544332 2244
Q ss_pred eEEEEEEeCCC
Q psy13120 215 RVRYTIISGDD 225 (384)
Q Consensus 215 ~i~y~i~~~~~ 225 (384)
.+.|....|..
T Consensus 156 tV~~~T~dGTA 166 (298)
T 3rb5_A 156 IVPYWTENDTA 166 (298)
T ss_dssp EEEEEEEEC--
T ss_pred EEEEEecCCcc
Confidence 57787665543
No 61
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=92.67 E-value=0.46 Score=34.65 Aligned_cols=83 Identities=18% Similarity=0.277 Sum_probs=51.2
Q ss_pred cCCCCEEccCceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEE
Q psy13120 72 NDNAPEFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEI 151 (384)
Q Consensus 72 Nd~~P~f~~~~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V 151 (384)
.+.+|.|.......|..+...... ..+.|+|...+.- +..|.+...+|......|.++.
T Consensus 7 ~~~~P~It~~~d~tI~~Gd~fd~~-~gvtA~D~~DGDl--------------------T~~I~V~g~Vdt~k~G~Y~VtY 65 (103)
T 2kpn_A 7 SDLEPKLTVPVGATIHVGDSFVPM-AEVLAIDKEDGDL--------------------TSKIKVDGEVDTTKAGTYVLTY 65 (103)
T ss_dssp CCCCCEEECCSEEEEETTCCCCHH-HHCEEECSSSCBC--------------------GGGCEEESCCCSSSCEEEEEEE
T ss_pred CCCCCEEEeCCCEEEECCCCcccc-cCcEEEcCCCCCc--------------------ceeEEEeCcccCCCceEEEEEE
Confidence 356888876644555544332211 1256776553220 1233334567888889999999
Q ss_pred EEEeCCCCCCceeEEEEEEeccCCCC
Q psy13120 152 KAKDRGEPSKSSRTKFFIRLLDENDN 177 (384)
Q Consensus 152 ~a~d~~~~~~~~~~~v~I~V~dvnd~ 177 (384)
.++|..+ ..++++.+|+|.+..+.
T Consensus 66 ~VtDs~G--n~~t~trtVtV~~~~e~ 89 (103)
T 2kpn_A 66 TVTDSKG--HEVTAKQTVTVKVREEV 89 (103)
T ss_dssp EEECTTS--CEEEEEEEEEEECSSCC
T ss_pred EEEcCCC--CEEEEEEEEEEeCCCcc
Confidence 9999865 56677888888765543
No 62
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=92.16 E-value=1.6 Score=40.58 Aligned_cols=90 Identities=16% Similarity=0.220 Sum_probs=57.2
Q ss_pred CCCCEEccC-c------eeEeeCCCCCCcEEEEEEE---EeCCCCCCceEEEEEEcCC-C----CCeeee-CcceEEEEc
Q psy13120 73 DNAPEFITA-N------ETTIPENSPLNTVVAALKA---IDRDEGQNSYVEYSIINSE-A----TPFSLG-PVDGLLRVA 136 (384)
Q Consensus 73 d~~P~f~~~-~------~~~v~E~~~~gt~v~~~~a---~D~D~~~~~~~~y~l~~~~-~----~~F~i~-~~~G~i~~~ 136 (384)
+++|+..-. . ...+.+ |.. ..|.| +|+| +..++|+-..-. . +...|. .....+.++
T Consensus 331 NhaPVa~iag~~g~~p~~~~v~a----G~t-VtLdAs~SsDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft 402 (437)
T 2yhg_A 331 NHHPVPVVNNDANEAVMYLNASA----GST-VSLDASGSSDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQ 402 (437)
T ss_dssp CCCCBCCBTTBCCSSCEEEEECT----TCE-EEEECTTCBCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEE
T ss_pred CCCCEEEecCCCcccccceEecC----CCE-EEEEeeeeeCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEE
Confidence 358876633 2 334443 333 34444 4777 344788776442 1 245664 344566666
Q ss_pred eeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEe
Q psy13120 137 QKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRL 171 (384)
Q Consensus 137 ~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V 171 (384)
.+-+ +....|.|.+.|+|.+.|.+++...|.|+|
T Consensus 403 ~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 403 IPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp CCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 5543 456899999999999988899999998887
No 63
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=91.85 E-value=1.6 Score=40.47 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=45.3
Q ss_pred EeCCCCCCceEEEEEEeCCCC----CCeEEE-CCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEE
Q psy13120 206 TDLDDGINGRVRYTIISGDDN----HDLTIS-EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILV 280 (384)
Q Consensus 206 ~D~D~~~~~~i~y~i~~~~~~----~~f~i~-~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V 280 (384)
+|+| +..++|+-..-... ....|. ..+..+.++.+-+ +....|+|+++|+|.+.+.. ++...|.|+|
T Consensus 365 sDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~l----Ts~~rViVtV 436 (437)
T 2yhg_A 365 SDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNL----YAYRRVVINV 436 (437)
T ss_dssp BCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCC----EEEEEEEEEE
T ss_pred eCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCc----cEEeEEEEEe
Confidence 3777 56788888643322 245664 4445666665544 45679999999999987654 6677777776
No 64
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.54 E-value=0.56 Score=34.17 Aligned_cols=32 Identities=16% Similarity=0.400 Sum_probs=27.3
Q ss_pred CCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEeecC
Q psy13120 37 TKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRDVND 73 (384)
Q Consensus 37 ~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~dvNd 73 (384)
....|.|++.++|..| .+++..++|+|...++
T Consensus 67 ~~G~y~f~LTVtD~~G-----~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN-----LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC-----CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC-----CEEEeEEEEEEcCCCC
Confidence 4569999999999987 4888999999998765
No 65
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=90.56 E-value=2.6 Score=33.19 Aligned_cols=81 Identities=21% Similarity=0.381 Sum_probs=61.1
Q ss_pred CCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEE
Q psy13120 177 NNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTI 256 (384)
Q Consensus 177 ~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V 256 (384)
.-|-|....|...++-....|..+++|...|... +..+.|.. +++..|.|.. .|.|.+.+.+-.-. ..-.+.|
T Consensus 32 C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~s---sDp~dFkV~~-DGtVya~r~v~L~~-~~~~F~V 104 (159)
T 1op4_A 32 CKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYES---SEPADFKVDE-DGTVYAVRSFPLTA-EQAKFLI 104 (159)
T ss_dssp CCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEEC---CCSSEEEEET-TTEEEEESCCSCSS-SCEEEEE
T ss_pred ccCCcCcceeEEeccccccCCceeceeecccCCC--CCceeEEc---CCCCCeEEeC-CCcEEEecceeecC-CCcEEEE
Confidence 4689999999778888888999999999999873 44577764 2333699987 59999988864322 2348889
Q ss_pred EEEECCCC
Q psy13120 257 QAEDCGGD 264 (384)
Q Consensus 257 ~a~D~~~~ 264 (384)
.|.|....
T Consensus 105 ~a~D~~t~ 112 (159)
T 1op4_A 105 YAQDKETQ 112 (159)
T ss_dssp EEEETTTT
T ss_pred EEEcCCCc
Confidence 99996654
No 66
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=89.29 E-value=1.1 Score=35.43 Aligned_cols=77 Identities=17% Similarity=0.273 Sum_probs=55.3
Q ss_pred CCCcccCCCeeEEEcCCCCCCCceEEEEEEEecCCCCCCCceEEEEEecCCCCCCCCcCCCCCCCceEEeCCcceEEEcc
Q psy13120 286 NYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDADSLPFNGLVRYFLKDSGASSGNSQTQGGTGDLFRVNSTTGDIYLLK 365 (384)
Q Consensus 286 ~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~D~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~f~Id~~tG~i~~~~ 365 (384)
..|-|.+..|...++-+. ..|..+++|...|... +..+.|...+ ...|.|+. .|.|++++
T Consensus 32 C~pGF~~~~~~~~vp~~l--~~g~~lgkV~F~dC~g---~~~~~~~ssD--------------p~dFkV~~-DGtVya~r 91 (159)
T 1op4_A 32 CKTGFPEDVYSAVLPKDV--HEGQPLLNVKFSNCNR---KRKVQYESSE--------------PADFKVDE-DGTVYAVR 91 (159)
T ss_dssp CCCBCCSCEEEECCCCSS--CSSCCEEECCCBCCSS---CCCEEEECCC--------------SSEEEEET-TTEEEEES
T ss_pred ccCCcCcceeEEeccccc--cCCceeceeecccCCC---CCceeEEcCC--------------CCCeEEeC-CCcEEEec
Confidence 578999999966666666 3478899999998864 5567776532 34899985 79999988
Q ss_pred cCCcccccEEEEEEEEEc
Q psy13120 366 SLDREKQAEYLLTLQAMD 383 (384)
Q Consensus 366 ~ld~e~~~~~~l~V~a~D 383 (384)
.+..-... -.+.|.|.|
T Consensus 92 ~v~L~~~~-~~F~V~a~D 108 (159)
T 1op4_A 92 SFPLTAEQ-AKFLIYAQD 108 (159)
T ss_dssp CCSCSSSC-EEEEEEEEE
T ss_pred ceeecCCC-cEEEEEEEc
Confidence 86432222 277788877
No 67
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.88 E-value=2.7 Score=30.40 Aligned_cols=32 Identities=16% Similarity=0.293 Sum_probs=26.8
Q ss_pred ccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCC
Q psy13120 248 RKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDIND 285 (384)
Q Consensus 248 ~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd 285 (384)
....|.|+++|+|..+. +++.+++|+|...+.
T Consensus 67 ~~G~y~f~LTVtD~~G~------s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERNL------QSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTCC------EEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCCC------EEEeEEEEEEcCCCC
Confidence 46799999999999875 578899999987754
No 68
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=84.02 E-value=10 Score=29.00 Aligned_cols=117 Identities=20% Similarity=0.131 Sum_probs=44.3
Q ss_pred CCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCC--CeEEECCCcEEEEcc----------cC
Q psy13120 177 NNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNH--DLTISEDNGLLRIAK----------NL 244 (384)
Q Consensus 177 ~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~--~f~i~~~~G~l~~~~----------~l 244 (384)
+.+.+....-...|.|+. |+...+|.-. .+......+.|....|.... -|. +.+|.|.... -+
T Consensus 3 ~~~~i~F~~~~y~V~E~~--g~~~v~V~R~-g~~~~~v~V~y~t~~gTA~~g~Dy~--~~~g~l~F~~Get~k~i~V~I~ 77 (137)
T 3ead_A 3 DPIRMYFEPGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIEVI 77 (137)
T ss_dssp --CEEEESSCEEEEEGGG--CEEEEEEEEE-SCCSSCEEEEEEEECSSSCBTTTBC--CCEEEEEECTTCCEEEEEEEBC
T ss_pred CCEEEEEcCCEEEEECCC--eEEEEEEEEE-CCCCceEEEEEEeECCCcCCCCcEe--EeeEEEEECCCceEEEEEEEEe
Confidence 344444444567788875 4444444333 23334556888877664421 221 1234443321 12
Q ss_pred -CccccCeEEEEEEEEEC-CCCCcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCC
Q psy13120 245 -NYERKAQYSLTIQAEDC-GGDTEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENT 303 (384)
Q Consensus 245 -D~e~~~~~~l~V~a~D~-~~~~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~ 303 (384)
|......-+|.|..++. .+.... ....++++| .|- |.+|.|.-..-...|.|+.
T Consensus 78 dD~~~E~~E~F~v~L~~p~~~a~lg--~~~~atvtI--~dd-D~~g~~~f~~~~~~V~E~~ 133 (137)
T 3ead_A 78 DDDVFEEDECFYIRLFNPSEGVKLA--VPMIATVMI--LDD-DHAGIFAFTDSVFEITESV 133 (137)
T ss_dssp CCSSCCCCEEEEEEEECCCTTCEEC--SCSEEEEEE--ECC-C------------------
T ss_pred cCCcccCcEEEEEEEECCCCCcEEC--CCcEEEEEE--ECC-CCCCEEEECCCcEEEeccc
Confidence 22223344555566654 222210 123455555 443 6678766555556677765
No 69
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=79.90 E-value=4.8 Score=29.18 Aligned_cols=45 Identities=18% Similarity=0.245 Sum_probs=34.4
Q ss_pred EEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeecCCCCC
Q psy13120 238 LRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDINDNYP 288 (384)
Q Consensus 238 l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dvNd~~P 288 (384)
|.+....|....+.|.++..++|..+. ..+++.+|+|.+..+..|
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~Gn------~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSKGH------EVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTTSC------EEEEEEEEEEECSSCCCC
T ss_pred EEEeCcccCCCceEEEEEEEEEcCCCC------EEEEEEEEEEeCCCcccC
Confidence 444456777788999999999998886 457888888887655444
No 70
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=71.04 E-value=8.9 Score=26.44 Aligned_cols=31 Identities=23% Similarity=0.463 Sum_probs=24.1
Q ss_pred CccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEe
Q psy13120 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS 281 (384)
Q Consensus 245 D~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~ 281 (384)
-|.....|.++++++|..+. ..+.++.|.|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~G~------~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDKGA------TATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETTSC------EEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECCCC------EEEEEEEEEEc
Confidence 46678899999999998875 45677777765
No 71
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=70.24 E-value=33 Score=26.02 Aligned_cols=44 Identities=16% Similarity=0.146 Sum_probs=24.9
Q ss_pred CCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC
Q psy13120 74 NAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSE 120 (384)
Q Consensus 74 ~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~ 120 (384)
+.+.+... ....|.|+. |+....+.-.. +......+.|...++.
T Consensus 3 ~~~~i~F~~~~y~V~E~~--g~~~v~V~R~g-~~~~~v~V~y~t~~gT 47 (137)
T 3ead_A 3 DPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGT 47 (137)
T ss_dssp --CEEEESSCEEEEEGGG--CEEEEEEEEES-CCSSCEEEEEEEECSS
T ss_pred CCEEEEEcCCEEEEECCC--eEEEEEEEEEC-CCCceEEEEEEeECCC
Confidence 34454444 667888875 65555554433 3334456888877764
No 72
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=70.04 E-value=11 Score=26.05 Aligned_cols=30 Identities=23% Similarity=0.373 Sum_probs=24.0
Q ss_pred cCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEE
Q psy13120 35 RETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIR 69 (384)
Q Consensus 35 ~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~ 69 (384)
|.....|.++++++|..|. +.+..+.|+|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G~-----~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKGA-----TATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTSC-----EEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCCC-----EEEEEEEEEEc
Confidence 5567899999999998873 66777777775
No 73
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=64.56 E-value=40 Score=26.44 Aligned_cols=104 Identities=12% Similarity=0.024 Sum_probs=48.2
Q ss_pred EEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccC
Q psy13120 165 TKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNL 244 (384)
Q Consensus 165 ~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~l 244 (384)
+.+.+.|.|- |..+.|....-...|.|+. |+.-.+|.-...+......+.|....|.....-...+..|.|.....
T Consensus 10 ~~~~~~i~dd-d~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~G- 85 (160)
T 3gin_A 10 AALEVLFQGP-GPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPG- 85 (160)
T ss_dssp ------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCCCEEEEEECTT-
T ss_pred ceEEEEEecC-CCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCccccceEEEEcCC-
Confidence 4455666653 3356666565567899985 45555554443443334568898887755322111134576665432
Q ss_pred CccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 245 D~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d 282 (384)
|.. -.++|...|-.... ...++.|.+.+
T Consensus 86 --et~--k~i~V~IidD~~~E------~~EtF~v~Ls~ 113 (160)
T 3gin_A 86 --ETQ--KEIRVGIIDDDIFE------EDKNFLVHLSN 113 (160)
T ss_dssp --CCE--EEEEEEBCCCSCCC------CCEEEEEEEEE
T ss_pred --cEE--EEEEEEEECCCCcc------CceEEEEEECC
Confidence 222 33444444433322 24555665554
No 74
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=62.04 E-value=12 Score=26.85 Aligned_cols=29 Identities=17% Similarity=0.232 Sum_probs=23.5
Q ss_pred cCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120 249 KAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 249 ~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d 282 (384)
.+.|+|+++|+|..+.. ..+..|+|+|.+
T Consensus 60 ~G~htl~a~AtD~~G~~-----~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAA-----STPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCB-----CCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCE-----EeeeEEEEEECc
Confidence 57899999999999876 356778888764
No 75
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=59.77 E-value=43 Score=28.22 Aligned_cols=59 Identities=19% Similarity=0.166 Sum_probs=39.0
Q ss_pred CCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEe--ecCC
Q psy13120 224 DDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS--DIND 285 (384)
Q Consensus 224 ~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~--dvNd 285 (384)
.-+.|...|+.++.+.-. +++ ...+.|.++|+|++...... ....++..+.|.|. |.||
T Consensus 44 ~LPsWL~fd~~t~TfsG~-P~~-~D~G~~~i~VtA~~~~~~g~-~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 44 ALPSWLHWDPHSHILEGL-PLD-TDKGVHYISVSAARLGANGS-HVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp SCCTTEEEETTTTEEEEC-CCG-GGCEEEEEEEEEEEECTTSC-EEEEEEEEEEEEEESSCCC-
T ss_pred CCCcceEEcCCCCeEEec-cCC-CCcceEEEEEEEeeccCCCC-ccccccceEEEEEecCCCcc
Confidence 457899999999987643 332 44678999999996532211 01245677888888 6665
No 76
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=59.60 E-value=77 Score=26.70 Aligned_cols=69 Identities=17% Similarity=0.166 Sum_probs=44.1
Q ss_pred ccEEEEEEe--C-CCCCcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEE--eecC
Q psy13120 3 GRLEYSIVS--G-DDEEIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIR--DVND 73 (384)
Q Consensus 3 ~~i~Y~i~~--~-~~~~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~--dvNd 73 (384)
...+|.+.. | .-+.|...|+.++.+.-. +++ .....|.|+|.|++.+........++..+.|.|. |.||
T Consensus 31 d~~~y~vt~a~g~~LPsWL~fd~~t~TfsG~-P~~-~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 31 SGEIIKVSAAGKEALPSWLHWDPHSHILEGL-PLD-TDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp TTEEEEEEETTSSSCCTTEEEETTTTEEEEC-CCG-GGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred CccEEEEEecCCCCCCcceEEcCCCCeEEec-cCC-CCcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 345777764 2 224799999999977643 332 3456799999998663211112356778889999 6555
No 77
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=59.09 E-value=91 Score=27.17 Aligned_cols=137 Identities=15% Similarity=0.113 Sum_probs=69.6
Q ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEeCCCCC--CeEEECCCcEEEEcc----------cCC-ccccCeEE
Q psy13120 187 SASVPENISVGATVLQVSATDLDDGINGRVRYTIISGDDNH--DLTISEDNGLLRIAK----------NLN-YERKAQYS 253 (384)
Q Consensus 187 ~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~--~f~i~~~~G~l~~~~----------~lD-~e~~~~~~ 253 (384)
...|.|+. |+...+|.-...+......+.|....|.... -|. +..|.|.... -+| ......-+
T Consensus 18 ~y~V~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~--~~~gtl~F~~Get~kti~V~IidD~~~E~~Et 93 (295)
T 3us9_A 18 TYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYE--FTEGTVVFKPGETQKEIRVGIIDDDIFEEDKN 93 (295)
T ss_dssp EEEEEGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBC--CCCEEEEECSSCCEEEEEECCCCCSSCCCCEE
T ss_pred eEEEecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCcc--ccceEEEECCCceEEEEEEEEeCCCcccCceE
Confidence 46788886 4555555555434333556888887664421 222 1234444321 122 22223445
Q ss_pred EEEEEEECCCC--------------CcceeeeeEEEEEEEEeecCCCCCcccCCCeeEEEcCCCCCCCceEEEEEEEecC
Q psy13120 254 LTIQAEDCGGD--------------TEERIRFDTATVSILVSDINDNYPVFLHSPYLALVNENTLPGPSFRIMTVQAHDA 319 (384)
Q Consensus 254 l~V~a~D~~~~--------------~~~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~e~~~~~~g~~i~~v~a~D~ 319 (384)
|.|..++.... ............+|+|.| ||++|.|.-..-...|.|+. |...++|.-.-.
T Consensus 94 F~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~D-dD~agv~sf~~~~~~V~E~~----G~~~v~V~Rs~~ 168 (295)
T 3us9_A 94 FLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFD-DDHAGIFTFEEPVTHVSESI----GIMEVKVLRTSG 168 (295)
T ss_dssp EEEEEECCCCCCCC-------------CCCCCSCCEEEEEEEC-CCCCCEEEESCSEEEEESCS----SEEEEEEEEESC
T ss_pred EEEEEecCccccccccccccccccCCcccccCCCceeEEEEcc-cccccccccCCCeEEEecCC----CeEEEEEEEEcC
Confidence 55555553210 000001112345555665 37788876555567889986 556666665543
Q ss_pred CCCCCCceEEEEEec
Q psy13120 320 DSLPFNGLVRYFLKD 334 (384)
Q Consensus 320 D~~~~~~~i~y~l~~ 334 (384)
-.+ .-.+.|...+
T Consensus 169 ~~g--~VtV~y~T~~ 181 (295)
T 3us9_A 169 ARG--NVIVPYKTIE 181 (295)
T ss_dssp CCS--CEEEEEEEEC
T ss_pred CCc--cEEEEEEecC
Confidence 222 3457777665
No 78
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=58.45 E-value=36 Score=33.92 Aligned_cols=77 Identities=17% Similarity=0.181 Sum_probs=48.5
Q ss_pred EEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCCCC
Q psy13120 98 ALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDENDN 177 (384)
Q Consensus 98 ~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvnd~ 177 (384)
.+.|.+--.+..-...|.|.+-+..+..+......+..+. | ....|+|.|+|.+..+.......++.|.|.
T Consensus 677 ~f~~l~y~~~~~~~y~Y~L~G~d~~W~~~~~~~~~~~ytn-L---~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~----- 747 (758)
T 3ott_A 677 ELSDLPYSLDEKNKFVYRLEGMDKEWNFLKSNINRITYSN-L---SYGNYQLIISKLERDGQPSNRPHILNIRIL----- 747 (758)
T ss_dssp EEECCCTTCSSCCCEEEEEETTCSSCEECCTTCCEEEECS-C---CSEEEEEEEEEBCTTSCBCSSCEEEEEEEC-----
T ss_pred EEEcccCCCCccCeEEEEecCCCCCccCCCCCcceEEecC-C---CCccEEEEEEEeCCCCCccCccEEEEEEEC-----
Confidence 4444444344455578888876666655543334454432 2 358899999999976654455677888886
Q ss_pred CCceec
Q psy13120 178 NPIFDS 183 (384)
Q Consensus 178 ~P~f~~ 183 (384)
||.++.
T Consensus 748 Pp~~~~ 753 (758)
T 3ott_A 748 PPWLEH 753 (758)
T ss_dssp CGGGGG
T ss_pred Ccchhh
Confidence 776643
No 79
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=58.43 E-value=76 Score=27.09 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=25.2
Q ss_pred CcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEe
Q psy13120 34 DRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRD 70 (384)
Q Consensus 34 D~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~d 70 (384)
-|.....|+++++++|..|. +.+....|+|..
T Consensus 64 tY~~~GtYtVtLTVtD~~G~-----s~t~t~~ItV~~ 95 (260)
T 2c4x_A 64 KYKNPGTYKVKLIVTDNQGA-----SSSFTATIKVTS 95 (260)
T ss_dssp CCSSCEEEEEEEEEEETTSC-----EEEEEEEEEEBC
T ss_pred EeCCCEEEEEEEEEEeCCCC-----eEEEEEEEEECC
Confidence 46677899999999998873 566777888765
No 80
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=56.96 E-value=17 Score=25.97 Aligned_cols=29 Identities=21% Similarity=0.348 Sum_probs=22.1
Q ss_pred CcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEe
Q psy13120 38 KSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRD 70 (384)
Q Consensus 38 ~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~d 70 (384)
...|+|+++|+|..|.. .....|.|+|.+
T Consensus 60 ~G~htl~a~AtD~~G~~----~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAA----STPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCB----CCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCE----EeeeEEEEEECc
Confidence 57899999999999853 445667777653
No 81
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=47.59 E-value=1.1e+02 Score=30.60 Aligned_cols=77 Identities=14% Similarity=0.147 Sum_probs=47.6
Q ss_pred EEEEEEEeCCCCCCceEEEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEeccCC
Q psy13120 96 VAALKAIDRDEGQNSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLLDEN 175 (384)
Q Consensus 96 v~~~~a~D~D~~~~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~dvn 175 (384)
-..+.|.+-..+..-...|.|.+-+..+-... ....+..+. | ....|+|.|+|.+..+......+++.|.|.
T Consensus 710 ~i~fs~l~y~~~~~~~y~YrL~G~d~~W~~~~-~~~~~~ytn-L---~pG~Y~f~V~a~n~~g~w~~~~~~l~i~I~--- 781 (795)
T 4a2l_A 710 SIEFVVSNYISGQHNTFAYKLEGYDKEWYYLT-DSRTVSYSN-L---PQGTYQFLVKAANSDGKWNPIPTALEIIVL--- 781 (795)
T ss_dssp EEEEEECCTTTTTCCEEEEEEETTCSSCEEES-SCCEEEEEC-C---CSEEEEEEEEEECTTSCBCSSCEEEEEEEC---
T ss_pred EEEEEEccCCCccccEEEEEEeCCCCCccCCC-CcCeEEecc-c---CCCeEEEEEEEECCCCccCCCceEEEEEEE---
Confidence 33455555444555668899988766665553 234444432 2 358899999999976643344677888875
Q ss_pred CCCCcee
Q psy13120 176 DNNPIFD 182 (384)
Q Consensus 176 d~~P~f~ 182 (384)
||.+.
T Consensus 782 --Ppww~ 786 (795)
T 4a2l_A 782 --PIWYK 786 (795)
T ss_dssp --CCC--
T ss_pred --CCccc
Confidence 66653
No 82
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.93 E-value=37 Score=24.83 Aligned_cols=57 Identities=16% Similarity=0.267 Sum_probs=33.0
Q ss_pred eEEEEEEeCCCCCCeEEE-CCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEee
Q psy13120 215 RVRYTIISGDDNHDLTIS-EDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSD 282 (384)
Q Consensus 215 ~i~y~i~~~~~~~~f~i~-~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~d 282 (384)
...++++.+.....-.|. ...+.+.+.+ | ..+.|.|+|+++|..+ .....++|+|..
T Consensus 48 syeWtli~gP~d~~~~~~~~~~~tlkLS~-L---~eG~Y~FqltVtd~~~-------~ge~~vnVTV~P 105 (113)
T 2e7m_A 48 NYEWNLISHPTDYQGEIKQGHKQTLNLSQ-L---SVGLYVFKVTVSSENA-------FGEGFVNVTVKP 105 (113)
T ss_dssp CCBCCEEECCTTCCCCCCTTSSSEEEECS-C---CSEEEEECCEEEETTE-------EEECCEEEEEEC
T ss_pred eeEEEEecCCCCCceEEecCCCCeeEecC-c---CcEEEEEEEEEECCCC-------CccceEEEEEcC
Confidence 345666666332112222 3356665543 3 3589999999999876 234556666654
No 83
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=45.85 E-value=1.5e+02 Score=25.76 Aligned_cols=140 Identities=20% Similarity=0.257 Sum_probs=74.1
Q ss_pred EEccCceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCC---CCeeeeCcceEEEEc----------eeCC---
Q psy13120 77 EFITANETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEA---TPFSLGPVDGLLRVA----------QKLD--- 140 (384)
Q Consensus 77 ~f~~~~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~---~~F~i~~~~G~i~~~----------~~ld--- 140 (384)
.|-......|.|+. |+....+.-...+......+.|...++.+ ..|.- ..|.|... .-+|
T Consensus 12 ~~f~~~~y~V~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~~--~~gtl~F~~Get~kti~V~IidD~~ 87 (295)
T 3us9_A 12 IFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEF--TEGTVVFKPGETQKEIRVGIIDDDI 87 (295)
T ss_dssp EEESCSEEEEEGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBCC--CCEEEEECSSCCEEEEEECCCCCSS
T ss_pred EEecCCeEEEecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCccc--cceEEEECCCceEEEEEEEEeCCCc
Confidence 34444677888986 66666666555344344568888777632 12321 13444321 1122
Q ss_pred ccCCCeEEEEEEEEeCC----------------CCCCceeEEEEEEeccCCCCCCceeccceEEEEecCCCCCcEEEEEE
Q psy13120 141 REIKSNYTLEIKAKDRG----------------EPSKSSRTKFFIRLLDENDNNPIFDSKSYSASVPENISVGATVLQVS 204 (384)
Q Consensus 141 ~e~~~~~~l~V~a~d~~----------------~~~~~~~~~v~I~V~dvnd~~P~f~~~~~~~~v~E~~~~g~~v~~v~ 204 (384)
+|....|.+.+.--... +..+......+|+|.|- |.+|.|....-...|.|+. |....+|.
T Consensus 88 ~E~~EtF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~Dd-D~agv~sf~~~~~~V~E~~--G~~~v~V~ 164 (295)
T 3us9_A 88 FEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFDD-DHAGIFTFEEPVTHVSESI--GIMEVKVL 164 (295)
T ss_dssp CCCCEEEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEECC-CCCCEEEESCSEEEEESCS--SEEEEEEE
T ss_pred ccCceEEEEEEecCccccccccccccccccCCcccccCCCceeEEEEccc-ccccccccCCCeEEEecCC--CeEEEEEE
Confidence 45555565555432110 11222334556666664 6688876665567899984 55555554
Q ss_pred EEeCCCCCCceEEEEEEeCC
Q psy13120 205 ATDLDDGINGRVRYTIISGD 224 (384)
Q Consensus 205 a~D~D~~~~~~i~y~i~~~~ 224 (384)
-.-. ....-.+.|....|.
T Consensus 165 Rs~~-~~g~VtV~y~T~~GT 183 (295)
T 3us9_A 165 RTSG-ARGNVIVPYKTIEGT 183 (295)
T ss_dssp EESC-CCSCEEEEEEEECCS
T ss_pred EEcC-CCccEEEEEEecCCC
Confidence 4322 222345677766554
No 84
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=39.81 E-value=1.8e+02 Score=24.81 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=26.3
Q ss_pred CCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEeec
Q psy13120 244 LNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVSDI 283 (384)
Q Consensus 244 lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~dv 283 (384)
.-|.....|+++++|+|..+. +.+.+..|.|...
T Consensus 63 htY~~~GtYtVtLTVtD~~G~------s~t~t~~ItV~~~ 96 (260)
T 2c4x_A 63 YKYKNPGTYKVKLIVTDNQGA------SSSFTATIKVTSA 96 (260)
T ss_dssp ECCSSCEEEEEEEEEEETTSC------EEEEEEEEEEBCS
T ss_pred EEeCCCEEEEEEEEEEeCCCC------eEEEEEEEEECCC
Confidence 456778999999999998875 3466777777654
No 85
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=34.63 E-value=1.5e+02 Score=29.25 Aligned_cols=77 Identities=16% Similarity=0.180 Sum_probs=45.6
Q ss_pred EEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEE
Q psy13120 201 LQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILV 280 (384)
Q Consensus 201 ~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V 280 (384)
..+.|.+--.+...+..|+|. |-...|..+......+..+ .| ....|+|.|+|++..+.-. ...+++.|.|
T Consensus 676 i~f~~l~y~~~~~~~y~Y~L~-G~d~~W~~~~~~~~~~~yt-nL---~pG~Y~f~V~a~~~~g~w~----~~~~~l~I~I 746 (758)
T 3ott_A 676 FELSDLPYSLDEKNKFVYRLE-GMDKEWNFLKSNINRITYS-NL---SYGNYQLIISKLERDGQPS----NRPHILNIRI 746 (758)
T ss_dssp EEEECCCTTCSSCCCEEEEEE-TTCSSCEECCTTCCEEEEC-SC---CSEEEEEEEEEBCTTSCBC----SSCEEEEEEE
T ss_pred EEEEcccCCCCccCeEEEEec-CCCCCccCCCCCcceEEec-CC---CCccEEEEEEEeCCCCCcc----CccEEEEEEE
Confidence 334444444444556888886 4344554443333444332 23 3679999999999776532 2357788888
Q ss_pred eecCCCCCccc
Q psy13120 281 SDINDNYPVFL 291 (384)
Q Consensus 281 ~dvNd~~P~f~ 291 (384)
. ||...
T Consensus 747 ~-----Pp~~~ 752 (758)
T 3ott_A 747 L-----PPWLE 752 (758)
T ss_dssp C-----CGGGG
T ss_pred C-----Ccchh
Confidence 4 77654
No 86
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=32.12 E-value=84 Score=21.31 Aligned_cols=30 Identities=17% Similarity=0.155 Sum_probs=21.2
Q ss_pred CccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEe
Q psy13120 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS 281 (384)
Q Consensus 245 D~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~ 281 (384)
-|.....|.++++++++.+ ++.+...|.|+
T Consensus 50 tY~~~G~YtV~Ltv~~g~~-------~~~a~~~V~V~ 79 (80)
T 1b4r_A 50 RYVLPGRYHVTAVLALGAG-------SALLGTDVQVE 79 (80)
T ss_dssp EECSSEEEEEEEEEECSSC-------EEEEEEEEEEB
T ss_pred ECCCCcEEEEEEEEEeCCc-------eEEEEEEEEEE
Confidence 4677889999999996554 34566666553
No 87
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=31.61 E-value=1.7e+02 Score=22.36 Aligned_cols=19 Identities=21% Similarity=0.370 Sum_probs=14.7
Q ss_pred cccCeEEEEEEEEECCCCC
Q psy13120 247 ERKAQYSLTIQAEDCGGDT 265 (384)
Q Consensus 247 e~~~~~~l~V~a~D~~~~~ 265 (384)
+....|.++|.|.+..+..
T Consensus 166 ~p~t~Y~~~V~A~n~~G~s 184 (197)
T 3lpw_A 166 IQGEEYSFRVSAQNEKGIS 184 (197)
T ss_dssp CTTCEEEEEEEEEETTEEC
T ss_pred CCCCEEEEEEEEEeCCccC
Confidence 3456899999999977654
No 88
>1wgo_A VPS10 domain-containing receptor sorcs2; polycystic kidney disease, PKD, structural genomics, KIAA1329 protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=31.38 E-value=52 Score=24.33 Aligned_cols=30 Identities=33% Similarity=0.587 Sum_probs=25.5
Q ss_pred CccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEEe
Q psy13120 245 NYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILVS 281 (384)
Q Consensus 245 D~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V~ 281 (384)
-|+....|.+++.|.+..+ ++++.+.|+|.
T Consensus 89 ~Y~~~GiyrVt~~AeN~~G-------~d~a~l~l~Vt 118 (123)
T 1wgo_A 89 RYESPGIYRVSVRAENTAG-------HDEAVLFVQVS 118 (123)
T ss_dssp CCSSCSCEEEEEEEECSSC-------EEEEEEEECBC
T ss_pred EEeCCCEEEEEEEEEccCC-------ceeEEEEEEEe
Confidence 4788899999999999887 67888888875
No 89
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=29.17 E-value=1.1e+02 Score=30.55 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=34.4
Q ss_pred CceEEEEEEcCCCCCeeeeCcceEEEEceeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEec
Q psy13120 109 NSYVEYSIINSEATPFSLGPVDGLLRVAQKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLL 172 (384)
Q Consensus 109 ~~~~~y~l~~~~~~~F~i~~~~G~i~~~~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~ 172 (384)
.-...|.|.+-+..+-... ....+..+ .=....|+|.|+|.+..+......+.+.|.|.
T Consensus 717 ~~~y~YrL~G~d~~W~~~~-~~~~~~yt----nL~pG~Y~f~V~a~~~~g~w~~~~~~l~i~I~ 775 (781)
T 3v9f_A 717 QVEYAYMLKGLENSWYTIN-EQNSVTFR----NIPPGKYEFLVKARLHNQDWSEDTTSLRIHIN 775 (781)
T ss_dssp GEEEEEEEETTEEEEEEES-SCSEEEEC----SCCSEEEEEEEEEEETTSCCCSCCEEEEEEEC
T ss_pred ccEEEEEecCCCCCccCcC-CcceEEEc----CCCCceEEEEEEEECCCCccCCCceEEEEEEc
Confidence 3445666665443333332 12333332 12357899999999987643445667778775
No 90
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=27.06 E-value=4.1e+02 Score=26.29 Aligned_cols=76 Identities=16% Similarity=0.264 Sum_probs=44.8
Q ss_pred EEEEEEeCCCCCCceEEEEEEeCCCCCCeEEECCCcEEEEcccCCccccCeEEEEEEEEECCCCCcceeeeeEEEEEEEE
Q psy13120 201 LQVSATDLDDGINGRVRYTIISGDDNHDLTISEDNGLLRIAKNLNYERKAQYSLTIQAEDCGGDTEERIRFDTATVSILV 280 (384)
Q Consensus 201 ~~v~a~D~D~~~~~~i~y~i~~~~~~~~f~i~~~~G~l~~~~~lD~e~~~~~~l~V~a~D~~~~~~~~~~~~~~~v~i~V 280 (384)
..+.+.+-..+...+..|+|. |-+..|-... ....+..+ .| ..+.|+|.|+|++..+.-. ...+++.|.|
T Consensus 711 i~fs~l~y~~~~~~~y~YrL~-G~d~~W~~~~-~~~~~~yt-nL---~pG~Y~f~V~a~n~~g~w~----~~~~~l~i~I 780 (795)
T 4a2l_A 711 IEFVVSNYISGQHNTFAYKLE-GYDKEWYYLT-DSRTVSYS-NL---PQGTYQFLVKAANSDGKWN----PIPTALEIIV 780 (795)
T ss_dssp EEEEECCTTTTTCCEEEEEEE-TTCSSCEEES-SCCEEEEE-CC---CSEEEEEEEEEECTTSCBC----SSCEEEEEEE
T ss_pred EEEEEccCCCccccEEEEEEe-CCCCCccCCC-CcCeEEec-cc---CCCeEEEEEEEECCCCccC----CCceEEEEEE
Confidence 445555544445667888887 4344555442 23444332 23 3679999999999876531 2357788888
Q ss_pred eecCCCCCccc
Q psy13120 281 SDINDNYPVFL 291 (384)
Q Consensus 281 ~dvNd~~P~f~ 291 (384)
. ||.+.
T Consensus 781 ~-----Ppww~ 786 (795)
T 4a2l_A 781 L-----PIWYK 786 (795)
T ss_dssp C-----CCC--
T ss_pred E-----CCccc
Confidence 3 67655
No 91
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=27.04 E-value=2.2e+02 Score=22.08 Aligned_cols=100 Identities=12% Similarity=0.225 Sum_probs=46.8
Q ss_pred EEEEEEEEEeecCCCCEEccC-ceeEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCC---CeeeeCcceEEEEc
Q psy13120 61 TTQVSIVIRDVNDNAPEFITA-NETTIPENSPLNTVVAALKAIDRDEGQNSYVEYSIINSEAT---PFSLGPVDGLLRVA 136 (384)
Q Consensus 61 ~~~v~I~V~dvNd~~P~f~~~-~~~~v~E~~~~gt~v~~~~a~D~D~~~~~~~~y~l~~~~~~---~F~i~~~~G~i~~~ 136 (384)
.+.+.+.|.|- |..+.|... ....|.|+. |+....+.-...+.+....+.|...++.+. .|.- ..|.|...
T Consensus 9 ~~~~~~~i~dd-d~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~--~~gtl~F~ 83 (160)
T 3gin_A 9 SAALEVLFQGP-GPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEF--TEGTVVFK 83 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCC--CEEEEEEC
T ss_pred cceEEEEEecC-CCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCccc--cceEEEEc
Confidence 34556666763 446677666 677899986 665555544434433345688988777421 2332 24655543
Q ss_pred eeCCccCCCeEEEEEEEEeCCCCCCceeEEEEEEec
Q psy13120 137 QKLDREIKSNYTLEIKAKDRGEPSKSSRTKFFIRLL 172 (384)
Q Consensus 137 ~~ld~e~~~~~~l~V~a~d~~~~~~~~~~~v~I~V~ 172 (384)
. -| ..-.++|...|..-+ ....++.|.+.
T Consensus 84 ~---Ge--t~k~i~V~IidD~~~--E~~EtF~v~Ls 112 (160)
T 3gin_A 84 P---GE--TQKEIRVGIIDDDIF--EEDKNFLVHLS 112 (160)
T ss_dssp T---TC--CEEEEEEEBCCCSCC--CCCEEEEEEEE
T ss_pred C---Cc--EEEEEEEEEECCCCc--cCceEEEEEEC
Confidence 1 11 234455555554332 23455555554
No 92
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=26.39 E-value=1.2e+02 Score=20.43 Aligned_cols=28 Identities=11% Similarity=0.064 Sum_probs=19.8
Q ss_pred cCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEE
Q psy13120 35 RETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVI 68 (384)
Q Consensus 35 ~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V 68 (384)
|.....|.++++++++.+ ++.+...|.|
T Consensus 51 Y~~~G~YtV~Ltv~~g~~------~~~a~~~V~V 78 (80)
T 1b4r_A 51 YVLPGRYHVTAVLALGAG------SALLGTDVQV 78 (80)
T ss_dssp ECSSEEEEEEEEEECSSC------EEEEEEEEEE
T ss_pred CCCCcEEEEEEEEEeCCc------eEEEEEEEEE
Confidence 566788999999995543 5555565655
No 93
>2kzw_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina mazei}
Probab=22.64 E-value=1.5e+02 Score=22.59 Aligned_cols=30 Identities=13% Similarity=0.212 Sum_probs=21.4
Q ss_pred cCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEe
Q psy13120 35 RETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRD 70 (384)
Q Consensus 35 ~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~d 70 (384)
|.....|+++++|+|..| +......+.|+.
T Consensus 110 Y~~~G~YtVtLtvtn~~G------~~~~t~~~~i~~ 139 (145)
T 2kzw_A 110 FFNEGEYIVSLIVSNEND------SDSASVTIRALE 139 (145)
T ss_dssp CSSCEEEEEEEEEECSSC------EEEEEEEEEEEC
T ss_pred cCCCcEEEEEEEEEcCCC------CeeEEEeeeeee
Confidence 445678999999999876 455666666654
No 94
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=20.87 E-value=2.5e+02 Score=20.41 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=32.8
Q ss_pred CcEEEeCCCcEEEECccCCcCCCcEEEEEEEEEeCCCCCCCCceeEEEEEEEEEe
Q psy13120 16 EIFTINPSNGTLSNLKHLDRETKSSYNLVVMATDMAKPPQKRLSSTTQVSIVIRD 70 (384)
Q Consensus 16 ~~F~id~~tG~i~~~~~lD~E~~~~~~l~v~a~d~~~~~~~~~s~~~~v~I~V~d 70 (384)
+.|..+...|.|.+... -.|..+.|-|+| ++..| ......|.+.|.|
T Consensus 66 ~r~~fd~~n~AL~I~~v-Q~eDSg~Y~LeV--t~~tG-----~v~~~~fql~VfD 112 (112)
T 2ptt_B 66 DIYGFDYGDFALSIKSA-KLQDSGHYLLEI--TNTGG-----KVCNKNFQLLILD 112 (112)
T ss_dssp GTEEECTTTCCEEESSC-CGGGCEEEEEEE--ECTTC-----BEEEEEEEEEEC-
T ss_pred CEEEEecCCcEEEEEec-CcccCceEEEEE--ecCCC-----cEEEEEEEEEeeC
Confidence 46899999999987653 256778898877 55544 2566677777654
Done!