RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13123
(129 letters)
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 45.1 bits (106), Expect = 3e-08
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
K Y C CGK+F S RH+ HLG++ + C CGK F KH L H++ H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 40.1 bits (93), Expect = 2e-06
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAH 67
Y C +CGK FT K + H+ +H G Y C +CGK F H+ H++ H
Sbjct: 4 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 38.1 bits (88), Expect = 1e-05
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
Y C CGK F H+ H GL+PY C CGK F L H+ H
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 39.2 bits (92), Expect = 4e-06
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 71 KPYVCTYCGKAFVRASDLKRHI-DAHLGVKKFACE 104
KPY+C CGK F R L HI H + C+
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 35.4 bits (82), Expect = 9e-05
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQA-HGGLKPYVC 75
Y C CGK F + H+ HI+ H +P+ C
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 33.8 bits (78), Expect = 4e-04
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 17 YQCGECGKQFTRKFSLNAHL-HVHYGSSNYKCPL 49
Y C CGK F+R LN H+ VH +KC +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 30.7 bits (70), Expect = 0.006
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 99 KKFACETCGKLFSSKHGLKYHVR-THKGE 126
K + C++CGK FS L H++ H E
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSE 32
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 38.0 bits (89), Expect = 8e-06
Identities = 15/32 (46%), Positives = 16/32 (50%)
Query: 95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
H G K + C CGK FS L H R H GE
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 37.6 bits (88), Expect = 1e-05
Identities = 17/31 (54%), Positives = 19/31 (61%)
Query: 67 HGGLKPYVCTYCGKAFVRASDLKRHIDAHLG 97
H G KPY C CGKAF R+S L +H H G
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 33.0 bits (76), Expect = 7e-04
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
Y C ECGK F+R L H VH G
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTG 32
Score = 30.3 bits (69), Expect = 0.008
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 38 VHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGG 69
+H G Y C CGK F + + H + H G
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 36.8 bits (86), Expect = 2e-05
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLGVK 99
+ +VC C +AF R LKRH +H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 34.5 bits (80), Expect = 2e-04
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 99 KKFACETCGKLFSSKHGLKYHVRTHKGE 126
+ F CE C + F+ + LK H R+H E
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 31.8 bits (73), Expect = 0.002
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
+ C C + F R+ L H H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 28.4 bits (64), Expect = 0.029
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQAHGGLK 71
+ C +C + F + H+K H ++H K
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 36.5 bits (85), Expect = 3e-05
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 67 HGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
H G KPY C C F ++ +K HI
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 32.6 bits (75), Expect = 0.001
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
H G K + C C F+ +K H+ E
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34
Score = 30.0 bits (68), Expect = 0.008
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 38 VHYGSSNYKCPLCGKFFIQLCHMKDHIQAH 67
H G Y+C +C F Q MK HI
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 28.4 bits (64), Expect = 0.034
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
Y+C C +FT+ ++ H+ +
Sbjct: 9 YECYICHARFTQSGTMKMHILQKHT 33
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 36.6 bits (85), Expect = 3e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 63 HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLGV 98
+ G+KP+ C C ++F R+ L H H+ V
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 31.2 bits (71), Expect = 0.003
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 91 HIDAHLGVKKFACETCGKLFSSKHGLKYHVRTH 123
G+K F C C + FS L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 27.4 bits (61), Expect = 0.098
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAH 67
G ++CP C + F + H+ H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 27.0 bits (60), Expect = 0.11
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVH 39
+QC +C + F+R L H H
Sbjct: 12 FQCPDCDRSFSRSDHLALHRKRH 34
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 35.4 bits (82), Expect = 1e-04
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 67 HGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
H G KPY C++C K F + L H +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 35.0 bits (81), Expect = 1e-04
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
H G K +AC C K F K L H + +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 30.4 bits (69), Expect = 0.006
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSS 43
Y C C K F +K L+ H ++ +
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 28.1 bits (63), Expect = 0.041
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 38 VHYGSSNYKCPLCGKFFIQLCHMKDHIQAH 67
H G Y C C K F Q + H + +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 34.9 bits (81), Expect = 1e-04
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLG 97
KP+ C C + F R+ L HI H G
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 33.0 bits (76), Expect = 6e-04
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
+QC C + F+R L H+ H G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 31.8 bits (73), Expect = 0.002
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 99 KKFACETCGKLFSSKHGLKYHVRTHKG 125
K F C C + FS L H+RTH G
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 28.0 bits (63), Expect = 0.051
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQAHGG 69
++C +C + F + H+ HI+ H G
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 34.8 bits (80), Expect = 2e-04
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 90 RHIDAHLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
R +++ C+ CGK FS L H RTH GE
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 32.1 bits (73), Expect = 0.002
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 63 HIQAHGGLKPYVCTYCGKAFVRASDLKRHIDAHLG 97
+ Y C CGK+F +SDL +H H G
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 25.9 bits (57), Expect = 0.31
Identities = 10/35 (28%), Positives = 12/35 (34%)
Query: 35 HLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGG 69
YKC CGK F + H + H G
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 25.9 bits (57), Expect = 0.33
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
Y+C ECGK F+ L+ H H G
Sbjct: 13 YKCDECGKSFSHSSDLSKHRRTHTG 37
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 34.7 bits (80), Expect = 2e-04
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 44 NYKC--PLCGKFFIQLCHMKDHIQAHGGLKPYVCTY 77
++ C P CGK F H+K+H++ H + Y+C +
Sbjct: 1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 32.4 bits (74), Expect = 0.001
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 73 YVCTY--CGKAFVRASDLKRHIDAHLGVKKFACE 104
+ C CGK+F LK H+ H + + CE
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 31.2 bits (71), Expect = 0.004
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 16 AYQCGE--CGKQFTRKFSLNAHLHVHYGSSNYKC 47
++ C E CGK F K L H+ +H + +Y C
Sbjct: 1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 28.9 bits (65), Expect = 0.021
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 103 CETCGKLFSSKHGLKYHVRTHKGE 126
CGK F+ K LK H++ H
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDT 29
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 33.9 bits (78), Expect = 3e-04
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLGVK 99
K + C C K F+R+ L +HI H K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 33.5 bits (77), Expect = 4e-04
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 99 KKFACETCGKLFSSKHGLKYHVRTHKGE 126
KKFAC C K F L H++TH+ +
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNK 28
Score = 30.4 bits (69), Expect = 0.005
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYG 41
+ C EC K+F R L+ H+ H
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQN 27
Score = 27.3 bits (61), Expect = 0.088
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQAHGGLK 71
+ CP C K F++ H+ HI+ H K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 33.4 bits (77), Expect = 5e-04
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLGVK 99
+P++CT+ CGK F R+ +L+RH H G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 30.0 bits (68), Expect = 0.009
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 99 KKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
+ F C CGK F+ L+ H RTH GE
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 27.3 bits (61), Expect = 0.087
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 17 YQCG--ECGKQFTRKFSLNAHLHVHYG 41
+ C CGK+FTR L H H G
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 23.8 bits (52), Expect = 1.5
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 45 YKC--PLCGKFFIQLCHMKDHIQAHGGLK 71
+ C CGK F + ++ H + H G K
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 32.7 bits (75), Expect = 9e-04
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAH 95
+PY C + C KAFVR DL RH +H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSH 28
Score = 27.7 bits (62), Expect = 0.062
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 99 KKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
+ ++C C K F H L H ++H+ +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 24.6 bits (54), Expect = 0.72
Identities = 9/29 (31%), Positives = 10/29 (34%), Gaps = 2/29 (6%)
Query: 17 YQCGE--CGKQFTRKFSLNAHLHVHYGSS 43
Y C C K F R L H H +
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQEKA 32
Score = 22.7 bits (49), Expect = 3.9
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 45 YKC--PLCGKFFIQLCHMKDHIQAH 67
Y C P C K F++ + H ++H
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSH 28
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 32.4 bits (74), Expect = 0.001
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 95 HLGVKKFACETCGKLFSSKHGLKYHVRTHKGE 126
G + F C C F++K H++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 31.6 bits (72), Expect = 0.002
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 67 HGGLKPYVCTYCGKAFVRASDLKRHIDAH 95
G +P+VC C AF ++ RH+ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.3 bits (66), Expect = 0.014
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSN 44
+ C C FT K + HL VH + +
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTDTLS 35
Score = 25.9 bits (57), Expect = 0.29
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 39 HYGSSNYKCPLCGKFFIQLCHMKDHIQAH 67
G + C +C F + H++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 32.3 bits (74), Expect = 0.001
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAH 95
+PYVC + C K F ++++LK HI H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 26.2 bits (58), Expect = 0.23
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 99 KKFAC--ETCGKLFSSKHGLKYHVRTH 123
+ + C + C K F+ LK H+ TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 23.1 bits (50), Expect = 2.9
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 17 YQCGE--CGKQFTRKFSLNAHLHVH 39
Y C C K+F + +L +H+ H
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 22.3 bits (48), Expect = 5.9
Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Query: 45 YKC--PLCGKFFIQLCHMKDHIQAH 67
Y C C K F Q ++K HI H
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILTH 27
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 32.3 bits (74), Expect = 0.001
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLG 97
+PY C C + F R++DL RHI H G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 26.9 bits (60), Expect = 0.12
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 99 KKFAC--ETCGKLFSSKHGLKYHVRTHKG 125
+ +AC E+C + FS L H+R H G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 26.1 bits (58), Expect = 0.22
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 17 YQCGE--CGKQFTRKFSLNAHLHVHYG 41
Y C C ++F+R L H+ +H G
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 23.0 bits (50), Expect = 3.0
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 45 YKC--PLCGKFFIQLCHMKDHIQAHGG 69
Y C C + F + + HI+ H G
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHTG 29
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 30
Score = 32.3 bits (74), Expect = 0.001
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLG 97
KP+ CT+ C K++ R +LK H+ +H G
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 30.4 bits (69), Expect = 0.006
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 99 KKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
K C E C K +S LK H+R+H GE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 26.9 bits (60), Expect = 0.10
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 17 YQCGE--CGKQFTRKFSLNAHLHVHYG 41
++C C K ++R +L HL H G
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 23.8 bits (52), Expect = 1.5
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 45 YKC--PLCGKFFIQLCHMKDHIQAHGG 69
+KC C K + +L ++K H+++H G
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLRSHTG 29
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 31.7 bits (72), Expect = 0.002
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHL 96
KP+ C CG+ F R+ + KRH HL
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIHL 27
Score = 25.9 bits (57), Expect = 0.26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 99 KKFACETCGKLFSSKHGLKYHVRTH 123
K FAC+ CG+ F+ K H + H
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 31.4 bits (72), Expect = 0.003
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 71 KPYVCTYCGKAFVRASDLKRH 91
KPY C CGKAF + S L H
Sbjct: 1 KPYKCLECGKAFSQNSGLINH 21
Score = 29.9 bits (68), Expect = 0.010
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVH 39
Y+C ECGK F++ L H +H
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIH 25
Score = 27.9 bits (63), Expect = 0.051
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 99 KKFACETCGKLFSSKHGLKYHVRTH 123
K + C CGK FS GL H R H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 23.3 bits (51), Expect = 1.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQAH 67
YKC CGK F Q + +H + H
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIH 25
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 31.2 bits (71), Expect = 0.003
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLG 97
KP+ CT+ CGK F +L+ H+ H G
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 28.1 bits (63), Expect = 0.038
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 99 KKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
K F C E CGK FS L+ HVR H G+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 26.2 bits (58), Expect = 0.22
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 17 YQCGE--CGKQFTRKFSLNAHLHVHYG 41
+QC CGK+F+ F+L H+ +H G
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 22.7 bits (49), Expect = 3.4
Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 45 YKC--PLCGKFFIQLCHMKDHIQAHGG 69
++C CGK F +++ H++ H G
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTHVRIHTG 29
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 30.4 bits (68), Expect = 0.007
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 73 YVCTYCGKAFVRASDLKRHIDAHLG 97
+VC CGKAFV +S LKRH H G
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTG 27
Score = 22.7 bits (48), Expect = 4.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Query: 19 CGECGKQFTRKFSLNAHLHVHYG 41
C ECGK F L H VH G
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTG 27
Score = 21.5 bits (45), Expect = 9.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Query: 103 CETCGKLFSSKHGLKYHVRTHKGE 126
C CGK F LK H H GE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 29.1 bits (65), Expect = 0.023
Identities = 8/46 (17%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 83 VRASDLKRHIDAHLGVKKFACETC--GKLFSSKHGLKYHVRTHKGE 126
+ + +++ + K F C K F ++ ++ H++TH +
Sbjct: 2 LPRGSIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
Score = 26.0 bits (57), Expect = 0.29
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 62 DHIQAHGGLKPYVCTYC--GKAFVRASDLKRHIDAHLGVK 99
D K + C + K F R +++ HI HL +
Sbjct: 8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 27.9 bits (62), Expect = 0.048
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 73 YVCTYCGKAFVRASDLKRHIDAHLGVK 99
Y+C CG + S LK+HI H V+
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 22.5 bits (48), Expect = 4.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 100 KFACETCGKLFSSKHGLKYHVRTHKGE 126
K+ CE CG LK H+RTH
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTDV 27
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 27.8 bits (62), Expect = 0.071
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 99 KKFACETCGKLFSSKHGLKYHVRTHKGE 126
+ + C C + F S L H+ H+ +
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRD 31
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 27.3 bits (60), Expect = 0.083
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 99 KKFACETCGKLFSSKHGLKYHVRTHKG 125
K ++C CG F K + YHVR+H G
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 22.7 bits (48), Expect = 4.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLG 97
KPY C CG F R + H+ +H G
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 21.9 bits (46), Expect = 7.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQAHGG 69
Y CP+CG F + M H+++H G
Sbjct: 4 YSCPVCGLRFKRKDRMSYHVRSHDG 28
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 27.3 bits (60), Expect = 0.086
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 44 NYKCPLCGKFFIQLCHMKDHIQAHGGLKPY 73
C +CGK F + H+ H +H G KPY
Sbjct: 5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.2 bits (57), Expect = 0.26
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 99 KKFACETCGKLFSSKHGLKYHVRTHKGE 126
K+ ACE CGK+F + L H +H GE
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGE 31
Score = 24.3 bits (52), Expect = 1.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 71 KPYVCTYCGKAFVRASDLKRHIDAHLGVKKFA 102
K C CGK F L RH +H G K ++
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 27.4 bits (60), Expect = 0.087
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 73 YVCTYCGKAFVRASDLKRHIDAHLG 97
+VC+ CGK F R + + RH D G
Sbjct: 5 FVCSKCGKTFTRRNTMARHADNCAG 29
Score = 24.7 bits (53), Expect = 0.99
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 15 SAYQCGECGKQFTRKFSLNAH 35
+A+ C +CGK FTR+ ++ H
Sbjct: 3 AAFVCSKCGKTFTRRNTMARH 23
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 27.0 bits (59), Expect = 0.10
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 103 CETCGKLFSSKHGLKYHVRTHKG 125
CE CGK FS K LK H+R H G
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHTG 26
Score = 24.3 bits (52), Expect = 0.95
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 72 PYVCTYCGKAFVRASDLKRHIDAHLG 97
P+ C CGK F R LK H+ H G
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 27.4 bits (61), Expect = 0.14
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 97 GVKKFACETCGKLFSSKHGLKYHVRT--HKGECKR 129
G C C + F LK H R+ HK K+
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQ 46
>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 25.6 bits (56), Expect = 0.34
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Query: 71 KPYVCTY--CGKAFVRASDLKRH 91
KPY+C + C KAF ASD +H
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKH 23
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 25.9 bits (56), Expect = 0.35
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 69 GLKPYVCTYCGKAFVRASDLKRHI 92
G+KPY C C K F+ RH+
Sbjct: 2 GIKPYECNICAKRFMWRDSFHRHV 25
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 25.0 bits (54), Expect = 0.49
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 103 CETCGKLFSSKHGLKYHVRTHKGE 126
C TC K F SK+ LK H R H GE
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGE 26
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 24.3 bits (53), Expect = 0.94
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 5/33 (15%)
Query: 99 KKFACE--TC---GKLFSSKHGLKYHVRTHKGE 126
K+F C C + F +++ L H+R H GE
Sbjct: 1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 25.0 bits (54), Expect = 0.97
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 68 GGLKPYVCTYCGKAFVRASDLKRHIDAH 95
G+ P C CGK F A+ L++H H
Sbjct: 4 AGILP--CGLCGKVFTDANRLRQHEAQH 29
Score = 25.0 bits (54), Expect = 0.98
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQAHG 68
C LCGK F ++ H HG
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQHG 30
Score = 24.2 bits (52), Expect = 2.0
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 14 TSAYQCGECGKQFTRKFSLNAHLHVHYGSS 43
CG CGK FT L H H +S
Sbjct: 4 AGILPCGLCGKVFTDANRLRQHEAQHGVTS 33
Score = 23.8 bits (51), Expect = 2.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 101 FACETCGKLFSSKHGLKYHVRTH 123
C CGK+F+ + L+ H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 24.0 bits (52), Expect = 1.3
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLG 97
KPYVC C K + S L++H+ G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 23.9 bits (51), Expect = 1.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 101 FACETCGKLFSSKHGLKYHV 120
F C CGK S G+KYHV
Sbjct: 3 FTCHHCGKQLRSLAGMKYHV 22
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 25.0 bits (54), Expect = 1.5
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 8 DPLATTTSAYQCGECGKQFTRKFSLNAHLHVH 39
+ S YQC C + L +HL++H
Sbjct: 10 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIH 41
>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 24.4 bits (53), Expect = 1.6
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 11 ATTTSAYQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCG 51
+T ++++C C FT L A+ + ++C C
Sbjct: 9 STNRASFKCPVCSSTFT---DLEANQLFDPMTGTFRCTFCH 46
Score = 24.4 bits (53), Expect = 1.9
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 7/37 (18%)
Query: 45 YKCPLCGKFFIQL--CHMKDHIQAHGGLKPYVCTYCG 79
+KCP+C F L + D + + CT+C
Sbjct: 15 FKCPVCSSTFTDLEANQLFDPMTGT-----FRCTFCH 46
>d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770
{Enterococcus faecalis [TaxId: 1351]}
Length = 172
Score = 25.3 bits (54), Expect = 1.9
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 43 SNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYC 78
N +CP C K+F + + G ++ + +
Sbjct: 32 INVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 67
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 23.5 bits (50), Expect = 2.1
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 101 FACETCGKLFSSKHGLKYHVRTHKGE 126
F C C + F + L+ H+ +H GE
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 22.4 bits (47), Expect = 6.0
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 73 YVCTYCGKAFVRASDLKRHIDAHLG 97
+ C+ C + F R +L+ H+ +H G
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTG 29
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.2 bits (49), Expect = 2.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 70 LKPYVCTYCGKAFVRASDLKRHIDAH 95
+KPY C C A +S L +H+ H
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLRIH 26
>d1flja_ b.74.1.1 (A:) Carbonic anhydrase {Rat (Rattus norvegicus),
isozyme III [TaxId: 10116]}
Length = 259
Score = 25.2 bits (54), Expect = 2.7
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 34 AHLHVHYGSSNYKCP---LCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFV 83
H+H+GSS+ + G + H+ + + G A V
Sbjct: 90 RQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHWNPKYNTFGEALKQPDGIAVV 142
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 23.1 bits (49), Expect = 2.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 17 YQCGECGKQFTRKFSLNAHLHV 38
Y C C K+FTRK ++ AH+ +
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKI 23
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 24.8 bits (54), Expect = 3.7
Identities = 3/20 (15%), Positives = 8/20 (40%)
Query: 73 YVCTYCGKAFVRASDLKRHI 92
Y+ + + F +R+
Sbjct: 35 YIDDFTLQYFGSKKQYERYR 54
>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus
kodakaraensis [TaxId: 311400]}
Length = 218
Score = 24.5 bits (53), Expect = 3.9
Identities = 9/24 (37%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 45 YKCPLCGKFFIQLCHMKDHIQAHG 68
YKC CGK ++ + +++ H++ HG
Sbjct: 147 YKCEECGK-YVDIENLEAHLREHG 169
>d2avue1 e.64.1.1 (E:5-160) Flagellar transcriptional activator FlhC
{Escherichia coli [TaxId: 562]}
Length = 156
Score = 24.3 bits (53), Expect = 3.9
Identities = 9/33 (27%), Positives = 11/33 (33%), Gaps = 8/33 (24%)
Query: 18 QCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLC 50
C CG F H H ++ C LC
Sbjct: 132 SCNCCGGNFIT--------HAHQPVGSFACSLC 156
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 24.8 bits (54), Expect = 4.0
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 73 YVCTYCGKAFVRASDLKRHI 92
++C YC K + H+
Sbjct: 32 WLCEYCLKYMKYEKSYRFHL 51
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 22.8 bits (48), Expect = 4.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVH 39
Y+CG C + F K +L+ H VH
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 124
Score = 24.3 bits (52), Expect = 4.5
Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 13/61 (21%)
Query: 18 QCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTY 77
+C CG+Q S + C C K C ++ + +C
Sbjct: 50 RCILCGEQLGMLGSASVV-----------CEDCKKNVCTKCGVETSNNRPHPVW--LCKI 96
Query: 78 C 78
C
Sbjct: 97 C 97
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 26
Score = 22.5 bits (47), Expect = 5.3
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 72 PYVCTYCGKAFVRASDLKRHI 92
PY C+ C + F++ DL+ H+
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHM 22
Score = 21.7 bits (45), Expect = 7.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 17 YQCGECGKQFTRKFSLNAHL 36
Y+C C +QF +K L +H+
Sbjct: 3 YKCSSCSQQFMQKKDLQSHM 22
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 22.5 bits (48), Expect = 5.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 72 PYVCTYCGKAFVRASDLKRH 91
PY C C +AF R L RH
Sbjct: 1 PYPCGLCNRAFTRRDLLIRH 20
Score = 22.1 bits (47), Expect = 7.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 17 YQCGECGKQFTRKFSLNAHLH 37
Y CG C + FTR+ L H
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQ 22
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 24.4 bits (53), Expect = 5.5
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 73 YVCTYCGKAFVRASDLKRHI 92
Y+C +C K + L++H+
Sbjct: 32 YLCEFCLKYMKSRTILQQHM 51
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 22.3 bits (47), Expect = 5.5
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 99 KKFAC--ETCGKLFSSKHGLKYHVRTHKGE 126
K F C E C K F+S H L H TH GE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 21.9 bits (46), Expect = 8.4
Identities = 11/29 (37%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Query: 71 KPYVCTY--CGKAFVRASDLKRHIDAHLG 97
KP+ C C K F L RH H G
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG 29
>d1twfi2 g.41.3.1 (I:50-121) RBP9 subunit of RNA polymerase II
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 72
Score = 22.9 bits (49), Expect = 7.4
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 43 SNYKCPLCGKFFIQLCHMKDHIQAHGGLKPYVCTYCGKAFVRASDLKR 90
S+ +CP C + + + +VC C F KR
Sbjct: 22 SDRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKR 69
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 37
Score = 22.0 bits (47), Expect = 9.2
Identities = 8/35 (22%), Positives = 11/35 (31%), Gaps = 13/35 (37%)
Query: 17 YQCGECGKQFTRKFSLNAHLHVHYGSSNYKCPLCG 51
Y C CG + + CP+CG
Sbjct: 6 YICPICG-------------YTAVDEAPEYCPVCG 27
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 21.6 bits (45), Expect = 9.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 71 KPYVCTYCGKAFVRASDLKRHI 92
K Y C YC +S+LK HI
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHI 22
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.327 0.139 0.466
Gapped
Lambda K H
0.267 0.0629 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 499,835
Number of extensions: 22309
Number of successful extensions: 410
Number of sequences better than 10.0: 1
Number of HSP's gapped: 392
Number of HSP's successfully gapped: 224
Length of query: 129
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 53
Effective length of database: 1,364,116
Effective search space: 72298148
Effective search space used: 72298148
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 48 (22.5 bits)