RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13135
(996 letters)
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors,
chitinase inhibitors, carbohyd metabolism, chitin
degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo
sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A
1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Length = 445
Score = 479 bits (1235), Expect = e-161
Identities = 154/347 (44%), Positives = 229/347 (65%), Gaps = 10/347 (2%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEAL 438
+ CY T+W+Q R G +F P+++DP LCTH+IYAF + +H+L+ E ++ ++
Sbjct: 3 LVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEW---NDETLYQEF 59
Query: 439 MQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWE 498
L++ NP +K LLAIGGW FG+ F ++ FV +I FLR++ F+GLD+DWE
Sbjct: 60 NGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWE 119
Query: 499 YP--RG--ADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEI 554
YP +G A D+ + L+++L AF+ EA+TSG+ RLLL+AAVPA + AGY+V +I
Sbjct: 120 YPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKI 179
Query: 555 SKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKL 614
++ LDF+N+M YDFHG WE+ GHNSPL + + L V+ + ++W+++G P KL
Sbjct: 180 AQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKL 239
Query: 615 MIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWD 674
++GMPTYGRSFTL + +GAPA+G G PG +T E G ++YYEVC T
Sbjct: 240 ILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVC---SWKGATKQRI 296
Query: 675 NEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
+Q+VP+ ++D+QWVGFDD S K K+ +LK+ G GG M+W++D+DD
Sbjct: 297 QDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
Score = 180 bits (459), Expect = 2e-49
Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 22/213 (10%)
Query: 674 DNEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDDLSTPFKELTGNV 733
N Q + D+ + + LK LK ++ + + F ++
Sbjct: 41 TNHQLSTTEWNDET--LYQEFNGLKKMNPKLK------TLLAIGGWNFGTQKFTDMVATA 92
Query: 734 FRMNQFVYESIEFLREHKFNGLDVDWEYP--RG--ADDRASYVNLLKELRLAFEGEAKTS 789
FV +I FLR++ F+GLD+DWEYP +G A D+ + L+++L AF+ EA+TS
Sbjct: 93 NNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTS 152
Query: 790 GEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL--KPL 847
G+ RLLL+AAVPA + AGY+V +I++ LDF+N+M YDFHG WE+ GHNSPL +
Sbjct: 153 GKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQE 212
Query: 848 EVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
E +L++ V L PAS
Sbjct: 213 ESGAAASLNV--------DAAVQQWLQKGTPAS 237
Score = 128 bits (323), Expect = 1e-31
Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 261 VCEMLRNGAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMD 320
VC GA + KVPY+ +QWVGFDD +S + K+++LK G GGAMVW +D+D
Sbjct: 285 VCSW--KGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLD 342
Query: 321 DFTGTVCGGDVKYPLIGAMREELNGIPRANNAKDVDWAKVAGNVEVETVTKPAPIKIDIF 380
DF G C +YPLI +R+EL+ + P P +
Sbjct: 343 DFAGFSCNQG-RYPLIQTLRQELSLPY--------------LPSGTPELEVPKPGQPSEP 387
Query: 381 CYMTSWSQARPGAGKFGPENIDPKLCTH 408
+ S Q GK +P+ +
Sbjct: 388 EHGPSPGQDTFCQGKADGLYPNPRERSS 415
Score = 115 bits (289), Expect = 3e-27
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
Query: 98 RVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKDGKVGL 157
++VCY+TNW+QYR +F P+D++P LCTH+I+AF + +LS+ E NDE L
Sbjct: 2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWNDE------TL 55
Query: 158 YERIEQLKKANPKLKTLLAIG 178
Y+ LKK NPKLKTLLAIG
Sbjct: 56 YQEFNGLKKMNPKLKTLLAIG 76
Score = 100 bits (251), Expect = 2e-22
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 921
LLL+AAVPA + AGY+V +I++ LDF+N+M YDFHG WE+ GHNSPL
Sbjct: 157 LLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPL 207
Score = 67.8 bits (166), Expect = 6e-12
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ CY T+W+Q R G +F P+++DP LCTH+IYA
Sbjct: 3 LVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYA 36
Score = 66.7 bits (163), Expect = 2e-11
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 930 SCEEEDGHISYHPDKADCTHYYMCEGERKHHMPCPSNLVFNPKENVCDW 978
+ +P+ + + +Y C R CP+ LVF+ C W
Sbjct: 396 DTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTW 444
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural
plasticity, functional versatility, immune system; 1.31A
{Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A
Length = 377
Score = 474 bits (1222), Expect = e-160
Identities = 153/347 (44%), Positives = 213/347 (61%), Gaps = 8/347 (2%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEAL 438
+ CY TSW++ RP G F P NIDP LCTH+IYAF ++++++T + + +EAL
Sbjct: 3 LMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNNEITYTHE---QDLRDYEAL 59
Query: 439 MQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWE 498
L++KN ++K LLAIGGW FG PF + F+ I FLR++ F+GL++DW+
Sbjct: 60 NGLKDKNTELKTLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQ 119
Query: 499 YP--RG--ADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEI 554
YP RG D+ + L+KE+R AFE E+ PRLLLT+ + I +GY +PE+
Sbjct: 120 YPGSRGSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAGIIDVIKSGYKIPEL 179
Query: 555 SKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKL 614
S+ LD+I VMTYD H + G NSPL L V+ W GA EKL
Sbjct: 180 SQSLDYIQVMTYDLHDPKDGYTGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKL 239
Query: 615 MIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWD 674
++G P YG +F L DP+K IGAP G PGKYT E+G ++YYEVC FL + T VWD
Sbjct: 240 IVGFPAYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATE-VWD 298
Query: 675 NEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
Q+VP+AY+ ++WVG+D+ RS K+K WLK++ GG ++W +DMDD
Sbjct: 299 APQEVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDD 345
Score = 171 bits (435), Expect = 9e-47
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 685 DDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDDLSTPFKELTGNVFRMNQFVYESI 744
+ ++ LK K LK ++ PF + F+ I
Sbjct: 50 EQDLRDYEALNGLKDKNTELK------TLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVI 103
Query: 745 EFLREHKFNGLDVDWEYP--RG--ADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAV 800
FLR++ F+GL++DW+YP RG D+ + L+KE+R AFE E+ PRLLLT+
Sbjct: 104 RFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTG 163
Query: 801 PASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL--KPLEVLLITTLSIP 858
+ I +GY +PE+S+ LD+I VMTYD H + G NSPL P ++ L++
Sbjct: 164 AGIIDVIKSGYKIPELSQSLDYIQVMTYDLHDPKDGYTGENSPLYKSPYDIGKSADLNVD 223
Query: 859 GATSYQKKLTVDLLLTAAVPAS 880
+ +
Sbjct: 224 SI--------ISYWKDHGAASE 237
Score = 136 bits (344), Expect = 7e-35
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 261 VCEMLRNGAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMD 320
VC L GA VWD +VPY G++WVG+D+ +S + K WLKDN GGA+VW +DMD
Sbjct: 285 VCTFLNEGATEVWDAPQEVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMD 344
Query: 321 DFTGTVCGGDVKYPLIGAMREELNG 345
DF+G+ C +PL ++ +LN
Sbjct: 345 DFSGSFCHQR-HFPLTSTLKGDLNI 368
Score = 117 bits (296), Expect = 1e-28
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 97 YRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKDGKVG 156
Y+++CYYT+W++ R G F+P +I+P LCTH+I+AF ++ +++ D
Sbjct: 1 YQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNNEITYTHEQDL------R 54
Query: 157 LYERIEQLKKANPKLKTLLAIG 178
YE + LK N +LKTLLAIG
Sbjct: 55 DYEALNGLKDKNTELKTLLAIG 76
Score = 93.2 bits (232), Expect = 2e-20
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 921
LLLT+ + I +GY +PE+S+ LD+I VMTYD H + G NSPL
Sbjct: 157 LLLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLHDPKDGYTGENSPL 207
Score = 67.7 bits (166), Expect = 5e-12
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ CY TSW++ RP G F P NIDP LCTH+IYA
Sbjct: 3 LMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYA 36
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure,
crystallography, asthma,inhibitor, chitin degradation,
methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo
sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A*
2ybt_A* 2ybu_A*
Length = 395
Score = 469 bits (1208), Expect = e-157
Identities = 157/347 (45%), Positives = 224/347 (64%), Gaps = 8/347 (2%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEAL 438
+ CY T+W+Q RPG G+F P++I+P LCTH+IYAF ++++++T E ++ ++A
Sbjct: 3 LTCYFTNWAQYRPGLGRFMPDDINPCLCTHLIYAFAGMQNNEITTIEW---NDVTLYQAF 59
Query: 439 MQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWE 498
L+ KN +K LLAIGGW FG+ PF + F+ I+FLR+++F+GLD DWE
Sbjct: 60 NGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWE 119
Query: 499 YP--RG--ADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEI 554
YP RG D+ + L++E+R AFE EAK +PRL++TAAV A I +GY++P++
Sbjct: 120 YPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQL 179
Query: 555 SKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKL 614
S+YLD+I+VMTYD HG WE G NSPL T L V+Y W GAP EKL
Sbjct: 180 SQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKL 239
Query: 615 MIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWD 674
++G PTYG +F L +P+ IGAP SG G G Y E+G +YYE+C FLK T WD
Sbjct: 240 IVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKNGATQ-GWD 298
Query: 675 NEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
Q+VP+AY+ + WVG+D+ +S +K WLK + +GG M+W++D+DD
Sbjct: 299 APQEVPYAYQGNVWVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDLDD 345
Score = 168 bits (428), Expect = 9e-46
Identities = 73/215 (33%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 674 DNEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDDLSTPFKELTGNV 733
N + + D + LK K LK ++ + + PF +
Sbjct: 41 QNNEITTIEWNDVT--LYQAFNGLKNKNSQLK------TLLAIGGWNFGTAPFTAMVSTP 92
Query: 734 FRMNQFVYESIEFLREHKFNGLDVDWEYP--RG--ADDRASYVNLLKELRLAFEGEAKTS 789
F+ I+FLR+++F+GLD DWEYP RG D+ + L++E+R AFE EAK
Sbjct: 93 ENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQI 152
Query: 790 GEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEV 849
+PRL++TAAV A I +GY++P++S+YLD+I+VMTYD HG WE G NSPL
Sbjct: 153 NKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKY-- 210
Query: 850 LLITTLSIPGATSYQKKLTVD----LLLTAAVPAS 880
P T L VD PA
Sbjct: 211 --------PTDTGSNAYLNVDYVMNYWKDNGAPAE 237
Score = 137 bits (346), Expect = 7e-35
Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 261 VCEMLRNGAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMD 320
+C L+NGA WD +VPY G+ WVG+D+ KS K WLK N +GGAMVW +D+D
Sbjct: 285 ICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDLD 344
Query: 321 DFTGTVCGGDVKYPLIGAMREELNGIPRANNA 352
DFTGT C K+PLI +++ L + A
Sbjct: 345 DFTGTFCNQG-KFPLISTLKKALGLQSASCTA 375
Score = 119 bits (300), Expect = 5e-29
Identities = 38/82 (46%), Positives = 55/82 (67%), Gaps = 6/82 (7%)
Query: 97 YRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKDGKVG 156
Y++ CY+TNW+QYR +G+F P+DI P LCTH+I+AF ++ ++++ E ND
Sbjct: 1 YQLTCYFTNWAQYRPGLGRFMPDDINPCLCTHLIYAFAGMQNNEITTIEWNDV------T 54
Query: 157 LYERIEQLKKANPKLKTLLAIG 178
LY+ LK N +LKTLLAIG
Sbjct: 55 LYQAFNGLKNKNSQLKTLLAIG 76
Score = 97.5 bits (243), Expect = 1e-21
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 921
L++TAAV A I +GY++P++S+YLD+I+VMTYD HG WE G NSPL
Sbjct: 157 LMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPL 207
Score = 67.4 bits (165), Expect = 8e-12
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ CY T+W+Q RPG G+F P++I+P LCTH+IYA
Sbjct: 3 LTCYFTNWAQYRPGLGRFMPDDINPCLCTHLIYA 36
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin,
chitooligosaccharide, pseudochitinase, HY; HET: NAG;
1.95A {Homo sapiens}
Length = 365
Score = 465 bits (1199), Expect = e-156
Identities = 151/345 (43%), Positives = 215/345 (62%), Gaps = 9/345 (2%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEAL 438
+ CY T+WSQ R GKF PENIDP LC+H+IY+F +++++K+ + K+K E ++ +
Sbjct: 4 LVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKVII---KDKSEVMLYQTI 60
Query: 439 MQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWE 498
L+ KNP +KILL+IGG+ FGS F + + +F+ I FLR H F+GLDV W
Sbjct: 61 NSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWI 120
Query: 499 YPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYL 558
YP + + L+ EL AF+ + S + RLLLTA V A + I Y V +++K L
Sbjct: 121 YP-DQKENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNSYQVEKLAKDL 179
Query: 559 DFINVMTYDFHGQWERQV--GHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMI 616
DFIN++++DFHG WE+ + GHNSPL VEY+ W+ +G P EK+++
Sbjct: 180 DFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVM 239
Query: 617 GMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWDNE 676
G+PTYG SFTL +GAPASG G G T +GF++YYE+C FLK + +
Sbjct: 240 GIPTYGHSFTLASAET-TVGAPASGPGAAGPITESSGFLAYYEICQFLK--GAKITRLQD 296
Query: 677 QQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
QQVP+A K +QWVG+DD +S++ K+ +LK GG MIWS+DMDD
Sbjct: 297 QQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDD 341
Score = 169 bits (429), Expect = 3e-46
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 13/165 (7%)
Query: 720 DDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELR 779
S F + + +F+ I FLR H F+GLDV W YP + + L+ EL
Sbjct: 80 LFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYP-DQKENTHFTVLIHELA 138
Query: 780 LAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQV- 838
AF+ + S + RLLLTA V A + I Y V +++K LDFIN++++DFHG WE+ +
Sbjct: 139 EAFQKDFTKSTKERLLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLI 198
Query: 839 -GHNSPL--KPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
GHNSPL + + ++ + V + +P+
Sbjct: 199 TGHNSPLSKGWQDRGPSSYYNV--------EYAVGYWIHKGMPSE 235
Score = 132 bits (333), Expect = 2e-33
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 261 VCEMLRNGAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMD 320
+C+ L GA + +VPY V G+QWVG+DD KS+ K+ +LK+ GGAM+W++DMD
Sbjct: 282 ICQFL-KGAKITRLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMD 340
Query: 321 DFTGTVCGGDVKYPLIGAMREELNGI 346
DFTG C YPL+ A++ L +
Sbjct: 341 DFTGKSCNQG-PYPLVQAVKRSLGSL 365
Score = 118 bits (299), Expect = 5e-29
Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 6/82 (7%)
Query: 97 YRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKDGKVG 156
Y++VCY+TNWSQ R + GKF PE+I+P LC+H+I++F ++ K+ + ++
Sbjct: 2 YKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKVIIKDKSEV------M 55
Query: 157 LYERIEQLKKANPKLKTLLAIG 178
LY+ I LK NPKLK LL+IG
Sbjct: 56 LYQTINSLKTKNPKLKILLSIG 77
Score = 92.7 bits (231), Expect = 3e-20
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQV--GHNSPLKPLEAN 927
LLLTA V A + I Y V +++K LDFIN++++DFHG WE+ + GHNSPL +
Sbjct: 153 LLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQD 211
Score = 67.3 bits (165), Expect = 7e-12
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ CY T+WSQ R GKF PENIDP LC+H+IY+
Sbjct: 4 LVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYS 37
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG
MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB:
2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A*
2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A*
2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ...
Length = 361
Score = 462 bits (1190), Expect = e-155
Identities = 144/343 (41%), Positives = 208/343 (60%), Gaps = 9/343 (2%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEAL 438
+ CY TSWSQ R G G P+ IDP LCTHVIY F + ++++ E ++ ++ L
Sbjct: 3 LICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYTFANISNNEIDTWEW---NDVTLYDTL 59
Query: 439 MQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWE 498
L+ +NP +K LL++GGW FG F ++ F+ FLR H F+GLD+ W
Sbjct: 60 NTLKNRNPKLKTLLSVGGWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWL 119
Query: 499 YPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYL 558
YP G D+ L+KE++ F EA+ +LLL+AAV A AI GYD+ +IS++L
Sbjct: 120 YP-GRRDKRHLTTLVKEMKAEFIREAQAGT-EQLLLSAAVSAGKIAIDRGYDIAQISRHL 177
Query: 559 DFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGM 618
DFI+++TYDFHG W + VGH+SPL + + +Y+ ++ GAP KL++G+
Sbjct: 178 DFISLLTYDFHGAWRQTVGHHSPLFRGNE-DASSRFSNADYAVSYMLRLGAPANKLVMGI 236
Query: 619 PTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWDNEQQ 678
PT+GRSFTL D+GAP SG G PG++T E G ++YYE+CDFL T +QQ
Sbjct: 237 PTFGRSFTLASSKT-DVGAPVSGPGIPGRFTKEKGILAYYEICDFLH--GATTHRFRDQQ 293
Query: 679 VPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
VP+A K +QWV +DD+ S+K K +LK G M+W++D+DD
Sbjct: 294 VPYATKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
Score = 171 bits (436), Expect = 4e-47
Identities = 56/161 (34%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 720 DDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELR 779
+ F ++ F+ FLR H F+GLD+ W YP G D+ L+KE++
Sbjct: 79 NFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYP-GRRDKRHLTTLVKEMK 137
Query: 780 LAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVG 839
F EA+ +LLL+AAV A AI GYD+ +IS++LDFI+++TYDFHG W + VG
Sbjct: 138 AEFIREAQAGT-EQLLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVG 196
Query: 840 HNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
H+SPL + V +L PA+
Sbjct: 197 HHSPLFRGN-------EDASSRFSNADYAVSYMLRLGAPAN 230
Score = 132 bits (334), Expect = 1e-33
Identities = 34/83 (40%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 261 VCEMLRNGAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMD 320
+C+ L +GA + +VPY G+QWV +DD++S++ K +LK+ GAMVW +D+D
Sbjct: 277 ICDFL-HGATTHRFRDQQVPYATKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLD 335
Query: 321 DFTGTVCGGDVKYPLIGAMREEL 343
DF GT CG ++ +PL A+++ L
Sbjct: 336 DFRGTFCGQNLTFPLTSAVKDVL 358
Score = 121 bits (306), Expect = 7e-30
Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 97 YRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKDGKVG 156
Y+++CYYT+WSQYR G P+ I+P LCTH+I+ F + ++ ++E ND
Sbjct: 1 YKLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYTFANISNNEIDTWEWNDV------T 54
Query: 157 LYERIEQLKKANPKLKTLLAIG 178
LY+ + LK NPKLKTLL++G
Sbjct: 55 LYDTLNTLKNRNPKLKTLLSVG 76
Score = 98.9 bits (247), Expect = 3e-22
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 862 SYQKKLTVDLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 921
+ T LLL+AAV A AI GYD+ +IS++LDFI+++TYDFHG W + VGH+SPL
Sbjct: 142 REAQAGTEQLLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHSPL 201
Query: 922 KPLEAN 927
+
Sbjct: 202 FRGNED 207
Score = 67.3 bits (165), Expect = 7e-12
Identities = 21/34 (61%), Positives = 23/34 (67%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ CY TSWSQ R G G P+ IDP LCTHVIY
Sbjct: 3 LICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYT 36
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB:
3alg_A*
Length = 353
Score = 436 bits (1123), Expect = e-145
Identities = 97/334 (29%), Positives = 154/334 (46%), Gaps = 11/334 (3%)
Query: 390 RPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEALMQLREKNPDIK 449
NID L TH+ AF L L +++ + ++ KNP +K
Sbjct: 9 WFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIIS-PENQDSFRQFTSTVQRKNPSVK 67
Query: 450 ILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASY 509
L+I G ST + + F+ SI R+ F+GLD+DWEYP A D +
Sbjct: 68 TFLSIAGGRANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAADMTNL 127
Query: 510 VNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFH 569
LL E R A EA+ SG LLLTAAV S Y V +++ LD+IN+M YDF+
Sbjct: 128 GTLLNEWRTAINTEARNSGRAALLLTAAVSNSPRVNGLNYPVESLARNLDWINLMAYDFY 187
Query: 570 GQW--ERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTYGRSFTL 627
G Q ++ L ++ W++ G P +KL++G+P YG ++ L
Sbjct: 188 GPNWSPSQTNSHAQL------FDPVNHVSGSDGINAWIQAGVPTKKLVLGIPFYGYAWRL 241
Query: 628 VDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWDNEQQVPFAYKDDQ 687
V+ + APA+G G + G M+Y + D++ + T V++ + Y
Sbjct: 242 VNANIHGLRAPAAGKSNVGAV--DDGSMTYNRIRDYIVESRATTVYNATIVGDYCYSGSN 299
Query: 688 WVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
W+ +DD ++++ K++++K G G W V D
Sbjct: 300 WISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQ 333
Score = 169 bits (431), Expect = 2e-46
Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 723 STPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAF 782
ST + + F+ SI R+ F+GLD+DWEYP A D + LL E R A
Sbjct: 79 STAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRTAI 138
Query: 783 EGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQW--ERQVGH 840
EA+ SG LLLTAAV S Y V +++ LD+IN+M YDF+G Q
Sbjct: 139 NTEARNSGRAALLLTAAVSNSPRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNS 198
Query: 841 NSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
++ L ++ + A VP
Sbjct: 199 HAQLF------------DPVNHVSGSDGINAWIQAGVPTK 226
Score = 113 bits (285), Expect = 3e-27
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Query: 261 VCEML-RNGAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDM 319
+ + + + A V++ + Y G W+ +DD +++R K+N++K G G W V
Sbjct: 272 IRDYIVESRATTVYNATIVGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAG 331
Query: 320 DDFTGTVCGGDVKYPLIGAMREEL 343
D G G +E+
Sbjct: 332 DQNWGLS---RTASQTWGVSFQEM 352
Score = 92.3 bits (230), Expect = 4e-20
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQW--ERQVGHNSPLKP 923
LLLTAAV S Y V +++ LD+IN+M YDF+G Q ++ L
Sbjct: 150 LLLTAAVSNSPRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFD 204
Score = 85.0 bits (211), Expect = 9e-18
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 108 QYRTKIGKFQPEDIEPDLCTHIIFAFGWLKK--GKLSSFESNDETKDGKVGLYERIEQLK 165
Y K +I+ L TH+ AF L +L N + + ++
Sbjct: 7 GYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQD------SFRQFTSTVQ 60
Query: 166 KANPKLKTLLAIG 178
+ NP +KT L+I
Sbjct: 61 RKNPSVKTFLSIA 73
Score = 49.6 bits (119), Expect = 3e-06
Identities = 7/23 (30%), Positives = 8/23 (34%)
Query: 232 RPGAGKFGPENIDPKLCTHVIYA 254
NID L TH+ A
Sbjct: 9 WFKDSGLALNNIDSTLFTHLFCA 31
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET:
FLC; 2.01A {Arabidopsis thaliana}
Length = 356
Score = 435 bits (1120), Expect = e-145
Identities = 98/342 (28%), Positives = 160/342 (46%), Gaps = 14/342 (4%)
Query: 383 MTSW--SQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEALMQ 440
M + + A +F +ID L TH+ AF L + ++
Sbjct: 1 MQTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVS-SANQPKFSTFTQT 59
Query: 441 LREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYP 500
++ +NP +K LL+IGG T + + N F+ SI R + F+GLD+DWEYP
Sbjct: 60 VQRRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP 119
Query: 501 RGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDF 560
A + ++ LL+E R A EA +SG+PRLLL AAV S + Y V ++ LD+
Sbjct: 120 SSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDW 179
Query: 561 INVMTYDFHGQ-WERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMP 619
+N+M YDF+G W R G + L + + + W++ G P +K ++G P
Sbjct: 180 VNLMAYDFYGPGWSRVTGPPAALFD-----PSNAGPSGDAGTRSWIQAGLPAKKAVLGFP 234
Query: 620 TYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWDNEQQV 679
YG ++ L + AP +G + G + Y ++ F+ + T V+++
Sbjct: 235 YYGYAWRLTNANSHSYYAPTTGAA-----ISPDGSIGYGQIRKFIVDNGATTVYNSTVVG 289
Query: 680 PFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
+ Y W+G+DD +S+ K+ + K+ G G W V DD
Sbjct: 290 DYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADD 331
Score = 174 bits (442), Expect = 6e-48
Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 12/159 (7%)
Query: 723 STPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAF 782
T + + N F+ SI R + F+GLD+DWEYP A + ++ LL+E R A
Sbjct: 80 KTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAV 139
Query: 783 EGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQ-WERQVGHN 841
EA +SG+PRLLL AAV S + Y V ++ LD++N+M YDF+G W R G
Sbjct: 140 VAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPP 199
Query: 842 SPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
+ L P + A +PA
Sbjct: 200 AALFD-----------PSNAGPSGDAGTRSWIQAGLPAK 227
Score = 122 bits (307), Expect = 4e-30
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 261 VCEML-RNGAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDM 319
+ + + NGA V++ + Y G W+G+DD +SI K+ + K G G W V
Sbjct: 270 IRKFIVDNGATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGA 329
Query: 320 DDFTGTVCGGDVKYPLIGAMREELNGI 346
DD +G + A + +
Sbjct: 330 DDNSGLSRAASQAWDATTATTRTIQKV 356
Score = 94.7 bits (236), Expect = 5e-21
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQ-WERQVGHNSPL 921
LLL AAV S + Y V ++ LD++N+M YDF+G W R G + L
Sbjct: 151 LLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAAL 202
Score = 85.4 bits (212), Expect = 8e-18
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 107 SQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKK--GKLSSFESNDETKDGKVGLYERIEQL 164
+ Y +F DI+ L TH+ AF L +++ +N + +
Sbjct: 7 ASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQP------KFSTFTQTV 60
Query: 165 KKANPKLKTLLAIG 178
++ NP +KTLL+IG
Sbjct: 61 QRRNPSVKTLLSIG 74
Score = 52.3 bits (126), Expect = 3e-07
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 225 MTSW--SQARPGAGKFGPENIDPKLCTHVIYA 254
M + + A +F +ID L TH+ A
Sbjct: 1 MQTVVKASYWFPASEFPVTDIDSSLFTHLFCA 32
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep
heparin, hormone-growth factor complex; HET: NAG BMA
MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5
d.26.3.1 PDB: 1jne_A*
Length = 420
Score = 395 bits (1016), Expect = e-128
Identities = 78/405 (19%), Positives = 163/405 (40%), Gaps = 70/405 (17%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDP--KLCTHVIYAFGTLKDHKLTLNE-DKEKD-EAGK 434
+ CY S S R G GK +++ + C+H++Y + L+ L ++ D +
Sbjct: 4 LVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKHQ 63
Query: 435 FEALMQLREKNPDIKILLAIGGWAF-----GSTPFKELTGNVFRMNQFVYESIEFLREHK 489
F + L+ K P +K+LL++GG + L G R F+ + E ++ +
Sbjct: 64 FSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKTYG 123
Query: 490 FNGLDVDWEYPRGAD------------------------------DRASYVNLLKELRLA 519
F+GLD+ +++P+ + + L+++++ +
Sbjct: 124 FDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRDVKDS 183
Query: 520 FEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWE--RQVG 577
+ LL+ V + + +D+P ++ +DF+N+ T+DF +
Sbjct: 184 LRADG-------FLLSLTVLPNVNST-WYFDIPALNGLVDFVNLATFDFLTPARNPEEAD 235
Query: 578 HNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTYGRSFTLVDPTKFD--- 634
+++P+ +G+ L ++ + W+ QG P K+ +G+ TYG ++ L + +
Sbjct: 236 YSAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGVP 295
Query: 635 IGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLV----------------WDNEQQ 678
+ SG G + + G +SY E+C L + +
Sbjct: 296 VVPETSGPAPEGFQSQKPGLLSYAEICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAY 355
Query: 679 VPFAYK--DDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
P + + WV +DD S K + + GG+ ++ + DD
Sbjct: 356 RPVDGQITEGIWVSYDDPDSASNKAAYARVKNLGGVALFDLSYDD 400
Score = 142 bits (360), Expect = 1e-36
Identities = 36/239 (15%), Positives = 82/239 (34%), Gaps = 65/239 (27%)
Query: 683 YKDDQWVGFDDERSLKMKMDWLKEDGYGGIMI----WSVDMDDLSTPFKELTGNV-FRMN 737
D F + SLK K LK +++ D + +L R
Sbjct: 56 NLDIYKHQFSEVTSLKRKYPHLK------VLLSVGGDHDIDPDHPNKYIDLLEGEKVRQI 109
Query: 738 QFVYESIEFLREHKFNGLDVDWEYPRGAD------------------------------D 767
F+ + E ++ + F+GLD+ +++P+
Sbjct: 110 GFIRSAYELVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALH 169
Query: 768 RASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMT 827
+ + L+++++ + + LL+ V + + +D+P ++ +DF+N+ T
Sbjct: 170 KEQFTALVRDVKDSLRADG-------FLLSLTVLPNVNST-WYFDIPALNGLVDFVNLAT 221
Query: 828 YDFHGQWE--RQVGHNSPLKPLEVLLITTLSIPGATSYQKKLTVD----LLLTAAVPAS 880
+DF + +++P+ G+ L D L+ P++
Sbjct: 222 FDFLTPARNPEEADYSAPIYHP----------DGSKDRLAHLNADFQVEYWLSQGFPSN 270
Score = 112 bits (281), Expect = 2e-26
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 97 YRVVCYYTNWSQYRTKIGKFQPEDIEPDL--CTHIIFAFGWLKKGKLSSFESNDETKDGK 154
+VCYY + S R +GK D+E L C+H+++ + L+ L ++ N+ D
Sbjct: 2 SNLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENL-DIY 60
Query: 155 VGLYERIEQLKKANPKLKTLLAIG 178
+ + LK+ P LK LL++G
Sbjct: 61 KHQFSEVTSLKRKYPHLKVLLSVG 84
Score = 102 bits (256), Expect = 4e-23
Identities = 24/102 (23%), Positives = 37/102 (36%), Gaps = 21/102 (20%)
Query: 261 VCEMLRNGAGYV-----------------WDDEMKVPYL--VHGDQWVGFDDEKSIRYKM 301
+C L N + P + WV +DD S K
Sbjct: 321 ICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKA 380
Query: 302 NWLKDNGYGGAMVWTVDMDDFTGTVCGGDVKYPLIGAMREEL 343
+ + GG ++ + DDF G C GD KYP++ A++ L
Sbjct: 381 AYARVKNLGGVALFDLSYDDFRGQ-CSGD-KYPILRAIKYRL 420
Score = 89.9 bits (223), Expect = 5e-19
Identities = 12/59 (20%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWE--RQVGHNSPLKPLEAN 927
LL+ V + + +D+P ++ +DF+N+ T+DF + +++P+ + +
Sbjct: 189 FLLSLTVLPNVNSTW-YFDIPALNGLVDFVNLATFDFLTPARNPEEADYSAPIYHPDGS 246
Score = 61.0 bits (148), Expect = 8e-10
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDP--KLCTHVIYA 254
+ CY S S R G GK +++ + C+H++Y
Sbjct: 4 LVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYG 39
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase,
hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5
d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A*
2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A*
1wno_A*
Length = 433
Score = 394 bits (1015), Expect = e-128
Identities = 93/377 (24%), Positives = 157/377 (41%), Gaps = 39/377 (10%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTL--------------- 423
Y +W+ P+++ + THV+YAF ++ +
Sbjct: 45 SVVYFVNWAIYGR---NHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPG 101
Query: 424 --NEDKEKDEAGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYES 481
D + G + L L+++N ++K+LL+IGGW + S F F +
Sbjct: 102 DSWSDTGNNVYGCIKQLYLLKKQNRNLKVLLSIGGWTY-SPNFAPAASTDAGRKNFAKTA 160
Query: 482 IEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAF-EGEAKTSGEPRLLLTAAVPA 540
++ L++ F+GLD+DWEYP +V LLKE+R A A +G LLT A PA
Sbjct: 161 VKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVRTALDSYSAANAGGQHFLLTVASPA 220
Query: 541 SFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYS 600
+ I + ++ + LDF N+M YD+ G + GH + + + + + +
Sbjct: 221 GPDKIKV-LHLKDMDQQLDFWNLMAYDYAGSFSSLSGHQANVYN-DTSNPLSTPFNTQTA 278
Query: 601 AKEWVKQGAPKEKLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEV 660
+ G P K+++GMP YGRSF D G P +G G+ + E G Y +
Sbjct: 279 LDLYRAGGVPANKIVLGMPLYGRSFANTD----GPGKPYNG---VGQGSWENGVWDYKAL 331
Query: 661 CDFLKKDNTTLVWDNEQQVPFAYK--DDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVD 718
+ T + ++Y + + +D+ + +K ++K G GG M W
Sbjct: 332 P----QAGATEHVLPDIMASYSYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSS 387
Query: 719 MDDLSTPFKELTGNVFR 735
D T L V
Sbjct: 388 SDK--TGSDSLITTVVN 402
Score = 172 bits (439), Expect = 8e-47
Identities = 47/160 (29%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 722 LSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLA 781
S F F +++ L++ F+GLD+DWEYP +V LLKE+R A
Sbjct: 139 YSPNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVRTA 198
Query: 782 F-EGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGH 840
A +G LLT A PA + I + ++ + LDF N+M YD+ G + GH
Sbjct: 199 LDSYSAANAGGQHFLLTVASPAGPDKIKV-LHLKDMDQQLDFWNLMAYDYAGSFSSLSGH 257
Query: 841 NSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
+ + S P +T + + +DL VPA+
Sbjct: 258 QANVYN-------DTSNPLSTPFNTQTALDLYRAGGVPAN 290
Score = 104 bits (261), Expect = 1e-23
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 17/116 (14%)
Query: 77 SLLVVRSSKSSVKANKDDSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFG-- 134
+++ R + S+ + S YR V Y+ NW+ Y P+D+ + TH+++AF
Sbjct: 23 AVMWNRDTSSTDLEARASSGYRSVVYFVNWAIYG---RNHNPQDLPVERLTHVLYAFANV 79
Query: 135 ------------WLKKGKLSSFESNDETKDGKVGLYERIEQLKKANPKLKTLLAIG 178
W K +S +T + G +++ LKK N LK LL+IG
Sbjct: 80 RPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLYLLKKQNRNLKVLLSIG 135
Score = 100 bits (252), Expect = 2e-22
Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 10/88 (11%)
Query: 262 CEMLRNGAGYVWDDEMKVPYLVHGD--QWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDM 319
+ + GA ++ Y + +D+ + K ++K G GGAM W
Sbjct: 329 KALPQAGATEHVLPDIMASYSYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSS 388
Query: 320 DDFTGTVCGGDVKYPLIGAMREELNGIP 347
D LI + L G
Sbjct: 389 DKTG--------SDSLITTVVNALGGTG 408
Score = 94.7 bits (236), Expect = 2e-20
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 860 ATSYQKKLTVDLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNS 919
+ S LLT A PA + I + ++ + LDF N+M YD+ G + GH +
Sbjct: 201 SYSAANAGGQHFLLTVASPAGPDKIKV-LHLKDMDQQLDFWNLMAYDYAGSFSSLSGHQA 259
Query: 920 PL 921
+
Sbjct: 260 NV 261
Score = 50.0 bits (120), Expect = 2e-06
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 9/86 (10%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYALSTPRRVCEMLRNGAGYVWDDEMKVP 280
Y +W+ P+++ + THV+YA + V G Y+ D +
Sbjct: 45 SVVYFVNWAIYGR---NHNPQDLPVERLTHVLYAFAN---VRP--ETGEVYMTDSWADIE 96
Query: 281 YLVHGDQWVGFDDEKSIRYK-MNWLK 305
GD W + K + LK
Sbjct: 97 KHYPGDSWSDTGNNVYGCIKQLYLLK 122
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest
center for structu genomics, MCSG, glycosyl hydrolases
family 18; 2.60A {Klebsiella pneumoniae subsp}
Length = 420
Score = 393 bits (1012), Expect = e-128
Identities = 90/403 (22%), Positives = 161/403 (39%), Gaps = 66/403 (16%)
Query: 381 CYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDE--------- 431
Y G G + +D + TH+ Y+FG + + + KD
Sbjct: 30 GYFNGGGDVTAGPG-GDIDKLDVRQITHLNYSFGLIYNDEKDETNAALKDPAHLHEIWLS 88
Query: 432 ---AGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREH 488
+ L LR++NPD+K+LL++GGW G+ F F+ + + ++++
Sbjct: 89 PKVQADLQKLPALRKQNPDLKVLLSVGGW--GARGFSGAAATAESRAVFIRSAQKIIQQY 146
Query: 489 KFNGLDVDWEYPRGAD---------DRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVP 539
+G+D+DWE+P DR ++ LLK LR A + L+T AV
Sbjct: 147 GLDGIDLDWEFPVNGAWGLVASQPADRDNFTALLKSLREAVG--------EQKLVTIAVG 198
Query: 540 ASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSY--QKKLTV 597
A+ E+ + DV ++ L++IN+MTYD + NS L + K +
Sbjct: 199 ANAESPKSWVDVKAVAPVLNYINLMTYDMAYGTQ---YFNSNLYDSSHWPTVAAADKYSA 255
Query: 598 EYSAKEWVKQGAPKEKLMIGMPTYGR----------SFTLVDPTKFDIGAPASG------ 641
++ ++ G ++ +G+ YGR +T D + P G
Sbjct: 256 DFVVNNYLAAGLKPSQMNLGIGFYGRVPKRAVEPGIDWTKADAQNNPVTQPYFGPQQIAL 315
Query: 642 GGEPGKYTAEAGFMSYYEVCDFLKKDNT---TLVWDNEQQVPFAYKDDQ------WVGFD 692
G ++ ++ Y ++ L D T WD+E +VP+ + ++
Sbjct: 316 FASLGYDLSKDTYVKYNDIVGKLLNDPQKRFTEHWDDEAKVPWLSVQSAEGKPLFALSYE 375
Query: 693 DERSLKMKMDWLKEDGYGGIMIWSVDMDDLSTPFKELTGNVFR 735
+ RS+ +K D++K G G M W DD +L +
Sbjct: 376 NPRSVAIKADYIKAKGLAGAMFWEYGADD----QNQLARQLAE 414
Score = 153 bits (389), Expect = 3e-40
Identities = 38/167 (22%), Positives = 68/167 (40%), Gaps = 24/167 (14%)
Query: 723 STPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGAD---------DRASYVN 773
+ F F+ + + ++++ +G+D+DWE+P DR ++
Sbjct: 119 ARGFSGAAATAESRAVFIRSAQKIIQQYGLDGIDLDWEFPVNGAWGLVASQPADRDNFTA 178
Query: 774 LLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQ 833
LLK LR A + L+T AV A+ E+ + DV ++ L++IN+MTYD
Sbjct: 179 LLKSLREAVG--------EQKLVTIAVGANAESPKSWVDVKAVAPVLNYINLMTYDMAYG 230
Query: 834 WERQVGHNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
+ NS L + + + V+ L A + S
Sbjct: 231 TQ---YFNSNLYDSSHWPTVAAADKYSADF----VVNNYLAAGLKPS 270
Score = 108 bits (272), Expect = 4e-25
Identities = 17/111 (15%), Positives = 38/111 (34%), Gaps = 10/111 (9%)
Query: 77 SLLVVRSSKSSVKANKDDSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWL 136
L ++ + + V Y+ G + ++ TH+ ++FG +
Sbjct: 6 RLPLLAALPLLCASALSAQPLMSVGYFNGGGDVTAGPG-GDIDKLDVRQITHLNYSFGLI 64
Query: 137 KKGKLSSFESNDETKDGKV---------GLYERIEQLKKANPKLKTLLAIG 178
+ + + +++ L+K NP LK LL++G
Sbjct: 65 YNDEKDETNAALKDPAHLHEIWLSPKVQADLQKLPALRKQNPDLKVLLSVG 115
Score = 97.9 bits (244), Expect = 1e-21
Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 20/95 (21%)
Query: 261 VCEMLRN----GAGYVWDDEMKVPYLVHGDQ------WVGFDDEKSIRYKMNWLKDNGYG 310
+ L N WDDE KVP+L + +++ +S+ K +++K G
Sbjct: 334 IVGKLLNDPQKRFTEHWDDEAKVPWLSVQSAEGKPLFALSYENPRSVAIKADYIKAKGLA 393
Query: 311 GAMVWTVDMDDFTGTVCGGDVKYPLIGAMREELNG 345
GAM W DD L + E L
Sbjct: 394 GAMFWEYGADDQNQ----------LARQLAESLGI 418
Score = 92.5 bits (230), Expect = 6e-20
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEAN 927
L+T AV A+ E+ + DV ++ L++IN+MTYD + NS L
Sbjct: 191 KLVTIAVGANAESPKSWVDVKAVAPVLNYINLMTYDMAYGTQ---YFNSNLYDSSHW 244
Score = 56.7 bits (137), Expect = 2e-08
Identities = 7/32 (21%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 223 CYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
Y G G + +D + TH+ Y+
Sbjct: 30 GYFNGGGDVTAGPG-GDIDKLDVRQITHLNYS 60
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides
immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A*
1ll6_A
Length = 392
Score = 387 bits (997), Expect = e-126
Identities = 96/374 (25%), Positives = 165/374 (44%), Gaps = 38/374 (10%)
Query: 381 CYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTL----------------KDHKLTLN 424
Y +W+ G P+++ TH++YAF + K +
Sbjct: 7 VYFVNWAIYGRG---HNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKW 63
Query: 425 EDKEKDEAGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEF 484
++ + G + + L++ N ++K LL+IGGW + S FK +F S++
Sbjct: 64 DEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTY-SPNFKTPASTEEGRKKFADTSLKL 122
Query: 485 LREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAF-EGEAKTSGEPRLLLTAAVPASFE 543
+++ F+G+D+DW+YP +V LLK R A AK + LLT A PA +
Sbjct: 123 MKDLGFDGIDIDWQYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQ 182
Query: 544 AIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKE 603
+ E+ KYLDF N+M YDF G W++ GH S + P + + + K+
Sbjct: 183 NYN-KLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKPE-STPFSSDKAVKD 240
Query: 604 WVKQGAPKEKLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDF 663
++K G P K+++GMP YGR+F D IG +G G + E G Y ++
Sbjct: 241 YIKAGVPANKIVLGMPLYGRAFASTDG----IGTSFNG---VGGGSWENGVWDYKDMP-- 291
Query: 664 LKKDNTTLVWDNEQQVPFAYKDDQ--WVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
+ + + ++Y ++ + +D + K +++ ++G GG M W D
Sbjct: 292 --QQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDK 349
Query: 722 LSTPFKELTGNVFR 735
T + L G V
Sbjct: 350 --TGNESLVGTVVN 361
Score = 171 bits (436), Expect = 1e-46
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 722 LSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLA 781
S FK +F S++ +++ F+G+D+DW+YP +V LLK R A
Sbjct: 98 YSPNFKTPASTEEGRKKFADTSLKLMKDLGFDGIDIDWQYPEDEKQANDFVLLLKACREA 157
Query: 782 F-EGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGH 840
AK + LLT A PA + + E+ KYLDF N+M YDF G W++ GH
Sbjct: 158 LDAYSAKHPNGKKFLLTIASPAGPQNYN-KLKLAEMDKYLDFWNLMAYDFSGSWDKVSGH 216
Query: 841 NSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
S + P + P +T + V + A VPA+
Sbjct: 217 MSNVFPST-------TKPESTPFSSDKAVKDYIKAGVPAN 249
Score = 101 bits (254), Expect = 5e-23
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Query: 262 CEMLRNGAGYVWDDEMKVPYLVHGDQ--WVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDM 319
+M + GA +++ Y ++ + +D K K ++ NG GG M W
Sbjct: 288 KDMPQQGAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSS 347
Query: 320 DDFTGTVCGGDVKYPLIGAMREELNGIPR 348
D L+G + L G +
Sbjct: 348 DKTGN--------ESLVGTVVNGLGGTGK 368
Score = 98.5 bits (246), Expect = 5e-22
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 97 YRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFG-------------WLKKGKLSS 143
+R V Y+ NW+ Y P+D++ D THI++AF W K
Sbjct: 3 FRSVVYFVNWAIYG---RGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYP 59
Query: 144 FESNDETKDGKVGLYERIEQLKKANPKLKTLLAIG 178
+ DE + G +++ LKK N LKTLL+IG
Sbjct: 60 GDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIG 94
Score = 94.3 bits (235), Expect = 1e-20
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEAN 927
LLT A PA + + E+ KYLDF N+M YDF G W++ GH S + P
Sbjct: 171 FLLTIASPAGPQNYN-KLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTK 226
Score = 48.4 bits (116), Expect = 8e-06
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query: 223 CYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
Y +W+ G P+++ TH++YA
Sbjct: 7 VYFVNWAIYGRG---HNPQDLKADQFTHILYA 35
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A
{Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1
PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A*
1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A*
1ogb_A 1ogg_A* 1e6z_A* 1ur9_A*
Length = 499
Score = 390 bits (1004), Expect = e-126
Identities = 86/395 (21%), Positives = 162/395 (41%), Gaps = 55/395 (13%)
Query: 381 CYMTSWSQARPGAGKFGPENIDPKLC---THVIYAFGTLKDHKLTLNEDKEKDEAGK--F 435
+ ++++ F NI P TH+ ++F + + + D +
Sbjct: 16 NQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVV 75
Query: 436 EALMQLREKNPDIKILLAIGGWAFGS------TPFKELTGNVFRMNQFVYESIEFLREHK 489
L L+ NP ++I+ +IGGW + + + +F + ++++
Sbjct: 76 NRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYG 135
Query: 490 FNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRL--LLTAAVPASFEAIAA 547
F+G+++DWEYP A + ++ L+E+R + T G L LT A ++
Sbjct: 136 FDGVNIDWEYP-QAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSR 194
Query: 548 GY-DVPEISKYLDFINVMTYDFHGQWERQVGHNSPL----------------------KP 584
Y + +I LD+IN+MTYD G WE+ H + L +
Sbjct: 195 YYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAALFGDAAGPTFYNALREANLGWSWEE 254
Query: 585 LEGATSYQKKLTVEYSAKE-WVKQGAPKEKLMIGMPTYGRSFTLVDPTKFDIGAPASGGG 643
L A LTV+ + ++ + +G P K+++G+P YGR+F V + S G
Sbjct: 255 LTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPG 314
Query: 644 --------------EPGKYTAEAGFMSYYEVCDFLKKDNT-TLVWDNEQQVPFAYKDD-- 686
E + SY ++ L+ + +W+++ + P+ Y
Sbjct: 315 EDPYPSTDYWLVGCEECVRDKDPRIASYRQLEQMLQGNYGYQRLWNDKTKTPYLYHAQNG 374
Query: 687 QWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
+V +DD S K K ++K+ GG+M W + D+
Sbjct: 375 LFVTYDDAESFKYKAKYIKQQQLGGVMFWHLGQDN 409
Score = 162 bits (412), Expect = 8e-43
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 715 WSVDMDDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNL 774
+S D+ + +F + ++++ F+G+++DWEYP A + ++
Sbjct: 99 YSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYP-QAAEVDGFIAA 157
Query: 775 LKELRLAFEGEAKTSGEPRL--LLTAAVPASFEAIAAGY-DVPEISKYLDFINVMTYDFH 831
L+E+R + T G L LT A ++ Y + +I LD+IN+MTYD
Sbjct: 158 LQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLA 217
Query: 832 GQWERQVGHNSPL 844
G WE+ H + L
Sbjct: 218 GPWEKVTNHQAAL 230
Score = 106 bits (267), Expect = 3e-24
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Query: 261 VCEMLRNGAGY--VWDDEMKVPYLVHGD--QWVGFDDEKSIRYKMNWLKDNGYGGAMVWT 316
+ +ML+ GY +W+D+ K PYL H +V +DD +S +YK ++K GG M W
Sbjct: 345 LEQMLQGNYGYQRLWNDKTKTPYLYHAQNGLFVTYDDAESFKYKAKYIKQQQLGGVMFWH 404
Query: 317 VDMDDFTGTVCGGDVKYPLIGAMREELNGIPRANNAKDVDWAKVAGNVEVETVT 370
+ D+ G L+ A+ N ++ D+ V +
Sbjct: 405 LGQDNRNGD---------LLAALDRYFNAADYDDSQLDMGTGLRYTGVGPGNLP 449
Score = 98.0 bits (244), Expect = 2e-21
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 13/95 (13%)
Query: 95 SKYRVVCYY-------TNWSQYRTKIGKFQPEDIEP---DLCTHIIFAFGWLKKGKLSSF 144
++ V+ YY N+++ T + F +I P THI F+F + ++
Sbjct: 3 TRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAW 62
Query: 145 ESNDETKDGKV-GLYERIEQLKKANPKLKTLLAIG 178
+ T D K + R+ LK NP L+ + +IG
Sbjct: 63 --DPATNDAKARDVVNRLTALKAHNPSLRIMFSIG 95
Score = 93.8 bits (233), Expect = 4e-20
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 866 KLTVDLLLTAAVPASFEAIAAGY-DVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 921
+ + LT A ++ Y + +I LD+IN+MTYD G WE+ H + L
Sbjct: 174 RQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAAL 230
Score = 50.3 bits (120), Expect = 3e-06
Identities = 6/35 (17%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 223 CYMTSWSQARPGAGKFGPENIDPKLC---THVIYA 254
+ ++++ F NI P TH+ ++
Sbjct: 16 NQINNYTETDTSVVPFPVSNITPAKAKQLTHINFS 50
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas
hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria
ochroleuca} PDB: 3g6l_A*
Length = 406
Score = 385 bits (992), Expect = e-125
Identities = 95/391 (24%), Positives = 158/391 (40%), Gaps = 42/391 (10%)
Query: 381 CYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTL----------------KDHKLTLN 424
Y T+W F P ++ HV+Y+F L K +
Sbjct: 25 VYFTNWGIYG---RNFQPADLQASKILHVLYSFMNLRVDGTVYSGDTYADLEKHYSDDSW 81
Query: 425 EDKEKDEAGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEF 484
D + G + L +L++ N +KI+L+IGGW + ST F F ++EF
Sbjct: 82 NDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTW-STNFPAAASTEATRATFAKTAVEF 140
Query: 485 LREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAF-EGEAKTSGEPRLLLTAAVPASFE 543
+++ F+G+DVDWEYP D + V LL+ +R A + L+ A PA
Sbjct: 141 MKDWGFDGIDVDWEYPASETDANNMVLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPS 200
Query: 544 AIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKE 603
+ ++ LD IN+M YD+ G W+ GH + L P S + + +
Sbjct: 201 HYNV-LKLAQLGSVLDNINLMAYDYAGSWDSVSGHQTNLYPSTSNPS-STPFSTKAAVDA 258
Query: 604 WVKQGAPKEKLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDF 663
++ G P K+++GMP YGR+F D P G+ + E+G Y +
Sbjct: 259 YIAAGVPASKIILGMPIYGRAFVGTD-------GPGKPYSTIGEGSWESGIWDYKVLP-- 309
Query: 664 LKKDNTTLVWDNEQQVPFAY--KDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
K T++ D+ ++Y + +D ++ K+ + K G GG M W D
Sbjct: 310 --KAGATVITDSAAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADK 367
Query: 722 ------LSTPFKELTGNVFRMNQFVYESIEF 746
+ T + + N Y + +F
Sbjct: 368 TGSDSLIGTALSSMGSHDSTQNCLSYPNSKF 398
Score = 170 bits (433), Expect = 3e-46
Identities = 64/230 (27%), Positives = 90/230 (39%), Gaps = 32/230 (13%)
Query: 664 LKKDNTTLVWDNEQQVPFAYKDDQWVGFDDE--------RSLKMKMDWLKEDGYGGIMI- 714
L+ D T D + Y DD W LK LK IM+
Sbjct: 57 LRVDGTVYSGDTYADLEKHYSDDSWNDIGTNAYGCVKQLYKLKKANRSLK------IMLS 110
Query: 715 ---WSVDMDDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASY 771
W+ ST F F ++EF+++ F+G+DVDWEYP D +
Sbjct: 111 IGGWT-----WSTNFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYPASETDANNM 165
Query: 772 VNLLKELRLAF-EGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDF 830
V LL+ +R A + L+ A PA + ++ LD IN+M YD+
Sbjct: 166 VLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPSHYNV-LKLAQLGSVLDNINLMAYDY 224
Query: 831 HGQWERQVGHNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
G W+ GH + L P S P +T + K VD + A VPAS
Sbjct: 225 AGSWDSVSGHQTNLYPST-------SNPSSTPFSTKAAVDAYIAAGVPAS 267
Score = 104 bits (261), Expect = 8e-24
Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 10/92 (10%)
Query: 262 CEMLRNGAGYVWDDEMKVPYLVHGD--QWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDM 319
+ + GA + D Y + +D +R K+++ K G GG+M W
Sbjct: 306 KVLPKAGATVITDSAAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASA 365
Query: 320 DDFTGTVCGGDVKYPLIGAMREELNGIPRANN 351
D LIG + N
Sbjct: 366 DKTGS--------DSLIGTALSSMGSHDSTQN 389
Score = 99.3 bits (248), Expect = 3e-22
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 18/112 (16%)
Query: 81 VRSSKSSVKANKDDSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKG- 139
+S + + Y+TNW Y FQP D++ H++++F L+
Sbjct: 5 RMEDLASTDLSTRATGSINAVYFTNWGIYG---RNFQPADLQASKILHVLYSFMNLRVDG 61
Query: 140 -------------KLSSFESNDETKDGKVGLYERIEQLKKANPKLKTLLAIG 178
S ND + G +++ +LKKAN LK +L+IG
Sbjct: 62 TVYSGDTYADLEKHYSDDSWNDIGTNAY-GCVKQLYKLKKANRSLKIMLSIG 112
Score = 93.2 bits (232), Expect = 3e-20
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 921
L+ A PA + ++ LD IN+M YD+ G W+ GH + L
Sbjct: 189 FQLSIAAPAGPSHYNV-LKLAQLGSVLDNINLMAYDYAGSWDSVSGHQTNL 238
Score = 49.6 bits (119), Expect = 3e-06
Identities = 16/84 (19%), Positives = 25/84 (29%), Gaps = 10/84 (11%)
Query: 223 CYMTSWSQARPGAGKFGPENIDPKLCTHVIYALSTPRRVCEMLRNGAGYVWDDEMKVPYL 282
Y T+W F P ++ HV+Y+ + +G Y D +
Sbjct: 25 VYFTNWGIYG---RNFQPADLQASKILHVLYSFMN------LRVDGTVYSGDTYADLEKH 75
Query: 283 VHGDQWVGFDDEKSIRYK-MNWLK 305
D W K + LK
Sbjct: 76 YSDDSWNDIGTNAYGCVKQLYKLK 99
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A
{Bacillus circulans} SCOP: c.1.8.5 d.26.3.1
Length = 419
Score = 382 bits (984), Expect = e-124
Identities = 107/425 (25%), Positives = 180/425 (42%), Gaps = 71/425 (16%)
Query: 366 VETVTKPAPIKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNE 425
++ T A I Y SW+ + +IDP TH+ YAF + + + N
Sbjct: 1 LQPATAEAADSYKIVGYYPSWAAYGR---NYNVADIDPTKVTHINYAFADICWNGIHGNP 57
Query: 426 DKEKDE-------------------------------------------AGKFEALMQLR 442
D AG L +L+
Sbjct: 58 DPSGPNPVTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLK 117
Query: 443 EKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYP-- 500
+ NP++K ++++GGW + S F ++ F +++FLR++ F+G+D+DWEYP
Sbjct: 118 QTNPNLKTIISVGGWTW-SNRFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPVS 176
Query: 501 -------RGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPE 553
+ +D+ +Y LL ++R + G + LLT A AS A ++ +
Sbjct: 177 GGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDG-KKYLLTIASGASATYAA-NTELAK 234
Query: 554 ISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSY----QKKLTVEYSAKEWVKQGA 609
I+ +D+IN+MTYDF+G W++ HN+PL A++ V A+ + G
Sbjct: 235 IAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGV 294
Query: 610 PKEKLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNT 669
P KL++G+P YGR + +GG G T EAG +Y++ N
Sbjct: 295 PAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVG--TWEAGSFDFYDLEANYINKNG 352
Query: 670 -TLVWDNEQQVPFAYK--DDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDDLSTPF 726
T W++ +VP+ Y + +++ +DD S+ K ++K G GG M W + D
Sbjct: 353 YTRYWNDTAKVPYLYNASNKRFISYDDAESVGYKTAYIKSKGLGGAMFWELSGDR----N 408
Query: 727 KELTG 731
K L
Sbjct: 409 KTLQN 413
Score = 167 bits (425), Expect = 5e-45
Identities = 70/290 (24%), Positives = 117/290 (40%), Gaps = 44/290 (15%)
Query: 620 TYGRSFTL--VDPTK--------FDI-GAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDN 668
YGR++ + +DPTK DI G +P + +
Sbjct: 23 AYGRNYNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPVTWTCQNEKSQTINVPNG 82
Query: 669 TTLVWDNEQQVPFAYKDDQWV-----GFDDERSLKMKMDWLKEDGYGGIMI----WSVDM 719
T ++ D + D W + LK LK +I W+
Sbjct: 83 TIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNPNLK------TIISVGGWT--- 133
Query: 720 DDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYP---------RGADDRAS 770
S F ++ F +++FLR++ F+G+D+DWEYP + +D+ +
Sbjct: 134 --WSNRFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPVSGGLDGNSKRPEDKQN 191
Query: 771 YVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDF 830
Y LL ++R + G + LLT A AS A ++ +I+ +D+IN+MTYDF
Sbjct: 192 YTLLLSKIREKLDAAGAVDG-KKYLLTIASGASATYAA-NTELAKIAAIVDWINIMTYDF 249
Query: 831 HGQWERQVGHNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
+G W++ HN+PL + +P A ++ L A VPA+
Sbjct: 250 NGAWQKISAHNAPLNYDP--AASAAGVPDANTFNVAAGAQGHLDAGVPAA 297
Score = 96.3 bits (240), Expect = 3e-21
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Query: 266 RNGAGYVWDDEMKVPYLVHGD--QWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMDDFT 323
+NG W+D KVPYL + +++ +DD +S+ YK ++K G GGAM W + D
Sbjct: 350 KNGYTRYWNDTAKVPYLYNASNKRFISYDDAESVGYKTAYIKSKGLGGAMFWELSGDRNK 409
Query: 324 GTVCGGDVKYPLIGAMREEL 343
L ++ +L
Sbjct: 410 T----------LQNKLKADL 419
Score = 93.6 bits (233), Expect = 3e-20
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 862 SYQKKLTVDLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 921
+ LLT A AS A ++ +I+ +D+IN+MTYDF+G W++ HN+PL
Sbjct: 205 AAGAVDGKKYLLTIASGASATYAA-NTELAKIAAIVDWINIMTYDFNGAWQKISAHNAPL 263
Query: 922 KPLEANVVSCEEEDGHIS 939
A + + +
Sbjct: 264 NYDPAASAAGVPDANTFN 281
Score = 91.7 bits (228), Expect = 1e-19
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 43/125 (34%)
Query: 94 DSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETK-- 151
Y++V YY +W+ Y + DI+P THI +AF + +
Sbjct: 9 ADSYKIVGYYPSWAAYG---RNYNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPV 65
Query: 152 ---------------DGKV-----------------------GLYERIEQLKKANPKLKT 173
+G + G ++ +LK+ NP LKT
Sbjct: 66 TWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNPNLKT 125
Query: 174 LLAIG 178
++++G
Sbjct: 126 IISVG 130
Score = 52.0 bits (125), Expect = 6e-07
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 208 VETVTKPAPIKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
++ T A I Y SW+ + +IDP TH+ YA
Sbjct: 1 LQPATAEAADSYKIVGYYPSWAAYGR---NYNVADIDPTKVTHINYA 44
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A
Length = 574
Score = 370 bits (951), Expect = e-117
Identities = 75/368 (20%), Positives = 139/368 (37%), Gaps = 42/368 (11%)
Query: 381 CYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEALMQ 440
GK P + D + + F + ++EK G
Sbjct: 172 VATDPDDAIANHKGKTIPVDPDGAVLASINCGFTKWEAGDANERYNQEKA-KGLLGGFRL 230
Query: 441 LREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHK-FNGLDVDWEY 499
L E + +++ L+IGGW+ S F E+ + FV +F + F+ LD+DWEY
Sbjct: 231 LHEADKELEFSLSIGGWSM-SGLFSEIAKDEILRTNFVEGIKDFFQRFPMFSHLDIDWEY 289
Query: 500 P--------RGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDV 551
P DD A++ L++++ A ++ A A I A
Sbjct: 290 PGSIGAGNPNSPDDGANFAILIQQITDAKISN-------LKGISIASSADPAKIDAANIP 342
Query: 552 PEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQ-GAP 610
+ + IN+MTYDF + ++ H++ + + K +++ + + +
Sbjct: 343 ALMDAGVTGINLMTYDFFTLGDGKLSHHTNIYR--DPSDVYSKYSIDDAVTHLIDEKKVD 400
Query: 611 KEKLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYE---------VC 661
+ + IG Y R+ T + S G YT + +E +C
Sbjct: 401 PKAIFIGYAGYTRNAKNATIT----TSIPSEEALKGTYTDANQTLGSFEYSVLEWTDIIC 456
Query: 662 DFLKKDNT------TLVWDNEQQVPFAYKD--DQWVGFDDERSLKMKMDWLKEDGYGGIM 713
++ + LV D + + Y + ++ D RS++ K ++K+ G GG+
Sbjct: 457 HYMDFEKGEGRNGYKLVHDKVAKADYLYSEATKVFISLDTPRSVRDKGRYVKDKGLGGLF 516
Query: 714 IWSVDMDD 721
IWS D D+
Sbjct: 517 IWSGDQDN 524
Score = 153 bits (389), Expect = 2e-39
Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 23/168 (13%)
Query: 722 LSTPFKELTGNVFRMNQFVYESIEFLREHK-FNGLDVDWEYP--------RGADDRASYV 772
+S F E+ + FV +F + F+ LD+DWEYP DD A++
Sbjct: 249 MSGLFSEIAKDEILRTNFVEGIKDFFQRFPMFSHLDIDWEYPGSIGAGNPNSPDDGANFA 308
Query: 773 NLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHG 832
L++++ A ++ A A I A + + IN+MTYDF
Sbjct: 309 ILIQQITDAKISN-------LKGISIASSADPAKIDAANIPALMDAGVTGINLMTYDFFT 361
Query: 833 QWERQVGHNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
+ ++ H++ + + + SI A ++ L+ V
Sbjct: 362 LGDGKLSHHTNIYRDPSDVYSKYSIDDAVTH-------LIDEKKVDPK 402
Score = 98.4 bits (245), Expect = 2e-21
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 266 RNGAGYVWDDEMKVPYLVH--GDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMDDFT 323
RNG V D K YL ++ D +S+R K ++KD G GG +W+ D D+
Sbjct: 467 RNGYKLVHDKVAKADYLYSEATKVFISLDTPRSVRDKGRYVKDKGLGGLFIWSGDQDNGI 526
Query: 324 GTVCGGDVKYPLIGAMREELNGIP 347
T L ++ ++ +
Sbjct: 527 LT---NAAHEGLKRRIKNKVIDMT 547
Score = 93.1 bits (231), Expect = 1e-19
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 871 LLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEAN 927
++ A A I A + + IN+MTYDF + ++ H++ + ++
Sbjct: 323 KGISIASSADPAKIDAANIPALMDAGVTGINLMTYDFFTLGDGKLSHHTNIYRDPSD 379
Score = 85.4 bits (211), Expect = 3e-17
Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 4/98 (4%)
Query: 81 VRSSKSSVKANKDDSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGK 140
+ K R+ GK P D + + I F + G
Sbjct: 152 LIGDKKYSADGNASIAVRLGVATDPDDAIANHKGKTIPVDPDGAVLASINCGFTKWEAGD 211
Query: 141 LSSFESNDETKDGKVGLYERIEQLKKANPKLKTLLAIG 178
+ + ++ K GL L +A+ +L+ L+IG
Sbjct: 212 ANERYNQEKAK----GLLGGFRLLHEADKELEFSLSIG 245
Score = 41.8 bits (98), Expect = 0.001
Identities = 5/56 (8%), Positives = 12/56 (21%), Gaps = 5/56 (8%)
Query: 223 CYMTSWSQARPGAGKFGPENIDPKLCTHVIYALSTPRRVCEMLRNGAGYVWDDEMK 278
GK P + D + + + + ++ K
Sbjct: 172 VATDPDDAIANHKGKTIPVDPDGAVLASINCGFTKWEAG-----DANERYNQEKAK 222
Score = 33.7 bits (77), Expect = 0.31
Identities = 10/47 (21%), Positives = 14/47 (29%), Gaps = 13/47 (27%)
Query: 221 IFCYMTSWSQARPGAGKFGPE-------------NIDPKLCTHVIYA 254
+ CY T WSQ P D + +IY+
Sbjct: 102 VLCYFTDWSQYDPRIINKEIRDTGGRSADILRLNTPDGRPFKRLIYS 148
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP:
c.1.8.5 d.26.3.1
Length = 435
Score = 364 bits (935), Expect = e-116
Identities = 98/423 (23%), Positives = 157/423 (37%), Gaps = 84/423 (19%)
Query: 381 CYMTSWSQ-ARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDE-------- 431
Y W R K + K TH+ Y+FG + + LT +
Sbjct: 13 GYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNGSDG 72
Query: 432 -----------------------------AGKFEALMQLREKNPDIKILLAIGGWAFGST 462
AG F L QL+ KNP +K+++++GGW S
Sbjct: 73 AGDAWADFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGWT-WSK 131
Query: 463 PFKELTGNVFRMNQFVYESIEFLREHK----------------FNGLDVDWEYPRG---- 502
F + + V I+ + F+G+D+DWE+P
Sbjct: 132 NFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDIDWEWPGTNSGL 191
Query: 503 -------ADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAI-AAGYDVPEI 554
+DRA++ LL E R + T+ + +L+A +PA+ I A G+D P
Sbjct: 192 AGNGVDTVNDRANFKALLAEFRKQLDAYGSTNN-KKYVLSAFLPANPADIDAGGWDDPAN 250
Query: 555 SKYLDFINVMTYDFHGQWERQV-GHNSPLKPLEGATS-YQKKLTVEYSAKEWVKQGAPKE 612
K LDF ++ YD HG W + GH + L KK + + + K+++ G +
Sbjct: 251 FKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAGIDPK 310
Query: 613 KLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLV 672
+L +G+ YGR +T PA+ T E Y ++ T
Sbjct: 311 QLGLGLAAYGRGWTGAKNV--SPWGPATD---GAPGTYETANEDYDKLK-----TLGTDH 360
Query: 673 WDNEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDDLSTPFKELTGN 732
+D + Y QW +D+ + K K D++ G GG M W + D EL G
Sbjct: 361 YDAATGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMWWELSGDR----NGELVGA 416
Query: 733 VFR 735
+
Sbjct: 417 MSD 419
Score = 146 bits (369), Expect = 1e-37
Identities = 44/197 (22%), Positives = 73/197 (37%), Gaps = 35/197 (17%)
Query: 713 MIWSVDMDDLSTPFKELTGNVFRMNQFVYESIEFLREHK----------------FNGLD 756
++ S+ S F + + V I+ + F+G+D
Sbjct: 120 VMISLGGWTWSKNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGID 179
Query: 757 VDWEYPRG-----------ADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFE 805
+DWE+P +DRA++ LL E R + T+ + +L+A +PA+
Sbjct: 180 IDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNN-KKYVLSAFLPANPA 238
Query: 806 AI-AAGYDVPEISKYLDFINVMTYDFHGQWERQV-GHNSPLKPLEVLLITTLSIPGATSY 863
I A G+D P K LDF ++ YD HG W + GH + L + +
Sbjct: 239 DIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDD-----PADPRAPSKKF 293
Query: 864 QKKLTVDLLLTAAVPAS 880
V L A +
Sbjct: 294 SADKAVKKYLAAGIDPK 310
Score = 103 bits (259), Expect = 2e-23
Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 265 LRNGAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMDDFTG 324
L+ +D + G QW +D+ + + K +++ G GG M W + D
Sbjct: 353 LKTLGTDHYDAATGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMWWELSGDRN-- 410
Query: 325 TVCGGDVKYPLIGAMREELNGIPRANNAKDV 355
L+GAM ++ +
Sbjct: 411 --------GELVGAMSDKFRAAAPGPVTEAA 433
Score = 92.9 bits (231), Expect = 5e-20
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 863 YQKKLTVDLLLTAAVPASFEAI-AAGYDVPEISKYLDFINVMTYDFHGQWERQV-GHNSP 920
Y +L+A +PA+ I A G+D P K LDF ++ YD HG W + GH +
Sbjct: 219 YGSTNNKKYVLSAFLPANPADIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQAN 278
Query: 921 LKPLEAN 927
L A+
Sbjct: 279 LYDDPAD 285
Score = 86.0 bits (213), Expect = 1e-17
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 35/120 (29%)
Query: 94 DSKYRVVCYYTNWSQY-RTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETK- 151
+ YR V Y+ W Y R K THI ++FG + L+ F +N
Sbjct: 6 VNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGT 65
Query: 152 --DGKV-------------------------------GLYERIEQLKKANPKLKTLLAIG 178
+G G + +++QLK NPKLK ++++G
Sbjct: 66 GPNGSDGAGDAWADFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLG 125
Score = 50.9 bits (122), Expect = 1e-06
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 223 CYMTSWSQ-ARPGAGKFGPENIDPKLCTHVIYA 254
Y W R K + K TH+ Y+
Sbjct: 13 GYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYS 45
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia
marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A*
1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A*
2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A*
Length = 540
Score = 365 bits (938), Expect = e-115
Identities = 99/396 (25%), Positives = 163/396 (41%), Gaps = 63/396 (15%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEA------ 432
+ Y W F + I + TH++Y F + + KE + +
Sbjct: 137 VGSYFVEWGVYG---RNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQALQR 193
Query: 433 ----------------------------------GKFEALMQLREKNPDIKILLAIGGWA 458
G F LM L++ +PD+KIL +IGGW
Sbjct: 194 SCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIGGWT 253
Query: 459 FGSTPFKELTGNVFRMNQFVYESIEFLREHK-FNGLDVDWEYP---------RGADDRAS 508
S PF + V R ++FV EFL+ K F+G+D+DWE+P D +
Sbjct: 254 L-SDPFFFMGDKVKR-DRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGET 311
Query: 509 YVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDF 568
YV L+KELR + + +G + LT+A+ A + I +D I +M+YDF
Sbjct: 312 YVLLMKELRAMLDQLSVETG-RKYELTSAISAGKDKIDK-VAYNVAQNSMDHIFLMSYDF 369
Query: 569 HGQWERQV-GHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTYGRSFTL 627
+G ++ + GH + L A T + QG K+++G YGR +T
Sbjct: 370 YGAFDLKNLGHQTALNA--PAWKPDTAYTTVNGVNALLAQGVKPGKIVVGTAMYGRGWTG 427
Query: 628 VDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWDNEQQVPFAYKDD- 686
V+ + +I + G P K T E G + Y ++ +D + P+ +K
Sbjct: 428 VNGYQNNIPFTGTATG-PVKGTWENGIVDYRQIAGQFMSGEWQYTYDATAEAPYVFKPST 486
Query: 687 -QWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
+ FDD RS++ K ++ + GG+ W +D D+
Sbjct: 487 GDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDADN 522
Score = 143 bits (362), Expect = 5e-36
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 22/170 (12%)
Query: 722 LSTPFKELTGNVFRMNQFVYESIEFLREHK-FNGLDVDWEYP---------RGADDRASY 771
LS PF + V R ++FV EFL+ K F+G+D+DWE+P D +Y
Sbjct: 254 LSDPFFFMGDKVKR-DRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGANPNLGSPQDGETY 312
Query: 772 VNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFH 831
V L+KELR + + +G + LT+A+ A + I +D I +M+YDF+
Sbjct: 313 VLLMKELRAMLDQLSVETG-RKYELTSAISAGKDKIDK-VAYNVAQNSMDHIFLMSYDFY 370
Query: 832 GQWERQV-GHNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPAS 880
G ++ + GH + L T + V+ LL V
Sbjct: 371 GAFDLKNLGHQTALNAPAWKPDTAYTTVNG--------VNALLAQGVKPG 412
Score = 100 bits (250), Expect = 5e-22
Identities = 33/189 (17%), Positives = 55/189 (29%), Gaps = 41/189 (21%)
Query: 28 SGDQDVSASINRFKLKNRTAASSANSAVIAAGSSKS-SVKASKDDPKYKVSLLVVRSSKS 86
SG S+ FK+ + A G + S + + D +
Sbjct: 65 SGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLAPLKEPLLE 124
Query: 87 SVKANKDDSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKL----- 141
K K +S V Y+ W Y F + I TH+++ F + G
Sbjct: 125 KNKPYKQNSGKVVGSYFVEWGVYG---RNFTVDKIPAQNLTHLLYGFIPICGGNGINDSL 181
Query: 142 --------------------------------SSFESNDETKDGKVGLYERIEQLKKANP 169
+ + D G + ++ LK+A+P
Sbjct: 182 KEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHP 241
Query: 170 KLKTLLAIG 178
LK L +IG
Sbjct: 242 DLKILPSIG 250
Score = 94.9 bits (236), Expect = 2e-20
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 13/87 (14%)
Query: 263 EMLRNGAGYVWDDEMKVPYLVHGD--QWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMD 320
+ + Y +D + PY+ + FDD +S++ K ++ D GG W +D D
Sbjct: 462 QFMSGEWQYTYDATAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDAD 521
Query: 321 DFTGTVCGGDVKYPLIGAMREELNGIP 347
+ ++ +M L
Sbjct: 522 NG-----------DILNSMNASLGNSA 537
Score = 85.6 bits (212), Expect = 2e-17
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 862 SYQKKLTVDLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQV-GHNSP 920
+ LT+A+ A + I +D I +M+YDF+G ++ + GH +
Sbjct: 325 QLSVETGRKYELTSAISAGKDKIDK-VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTA 383
Query: 921 LKP 923
L
Sbjct: 384 LNA 386
Score = 49.4 bits (118), Expect = 4e-06
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 3/34 (8%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ Y W F + I + TH++Y
Sbjct: 137 VGSYFVEWGVYG---RNFTVDKIPAQNLTHLLYG 167
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase,
hydro hydrolase inhibitor complex; HET: POY; 1.16A
{Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A*
3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A*
3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A*
3as3_A*
Length = 584
Score = 348 bits (894), Expect = e-108
Identities = 101/438 (23%), Positives = 170/438 (38%), Gaps = 90/438 (20%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEA------ 432
+ Y W + +N+ TH++Y F + ++
Sbjct: 140 MGTYFVEWGIYGR---DYTVDNMPVDNLTHILYGFIPICGPNESVKSVGGNSFNALQTAC 196
Query: 433 ---------------------------------GKFEALMQLREKNPDIKILLAIGGWAF 459
G + LM L+++NPD+KI+ +IGGW
Sbjct: 197 RGVNDYEVVIHDPWAAYQKSFPQAGHEYSTPIKGNYAMLMALKQRNPDLKIIPSIGGWTL 256
Query: 460 GSTPFKELTGNVFRMNQFVYESIEFLREHKF-NGLDVDWEYP----------RGADDRAS 508
S PF + R + FV +FL+ KF +G+D+DWE+P +D +
Sbjct: 257 -SDPFYDFVDKKNR-DTFVASVKKFLKTWKFYDGVDIDWEFPGGGGAAADKGDPVNDGPA 314
Query: 509 YVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDF 568
Y+ L++ELR+ + +G LT+A+ ++ I D + +Y+D+I MTYDF
Sbjct: 315 YIALMRELRVMLDELEAETG-RTYELTSAIGVGYDKIE-DVDYADAVQYMDYIFAMTYDF 372
Query: 569 HGQWERQVGHNSPL---------------KPLEGATSYQKKLTVEYSAKEWVKQGAPKEK 613
+G W GH + L G T + + + QG P K
Sbjct: 373 YGGWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGPAYTADNGIQLLLAQGVPANK 432
Query: 614 LMIGMPTYGRSFTLVDP-TKFDIGAPASG------GGEPGKYTAEAGFMSYYEVCDFLKK 666
L++G YGR + V P T D P +G G + E G + Y + F+
Sbjct: 433 LVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGSTAQGVWEDGVIDYKGIKSFMLG 492
Query: 667 DNT------TLVWDNEQQVPFAYKDD--QWVGFDDERSLKMKMDWLKEDGYGGIMIWSVD 718
N +D + + P+ + + + FDD RS+ K ++ K G G+ W +D
Sbjct: 493 ANNTGINGFEYGYDAQAEAPWVWNRSTGELITFDDHRSVLAKGNYAKSLGLAGLFSWEID 552
Query: 719 MDD---LSTPFKELTGNV 733
D+ L+ + + G V
Sbjct: 553 ADNGDILNAMHEGMAGGV 570
Score = 152 bits (385), Expect = 9e-39
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 23/179 (12%)
Query: 722 LSTPFKELTGNVFRMNQFVYESIEFLREHKF-NGLDVDWEYP----------RGADDRAS 770
LS PF + R + FV +FL+ KF +G+D+DWE+P +D +
Sbjct: 256 LSDPFYDFVDKKNR-DTFVASVKKFLKTWKFYDGVDIDWEFPGGGGAAADKGDPVNDGPA 314
Query: 771 YVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDF 830
Y+ L++ELR+ + +G LT+A+ ++ I D + +Y+D+I MTYDF
Sbjct: 315 YIALMRELRVMLDELEAETG-RTYELTSAIGVGYDKIE-DVDYADAVQYMDYIFAMTYDF 372
Query: 831 HGQWERQVGHNSPL-----KPLEVLLITTLSIPGATSYQKKLTVD----LLLTAAVPAS 880
+G W GH + L + G T D LLL VPA+
Sbjct: 373 YGGWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGPAYTADNGIQLLLAQGVPAN 431
Score = 93.8 bits (233), Expect = 6e-20
Identities = 34/188 (18%), Positives = 58/188 (30%), Gaps = 40/188 (21%)
Query: 28 SGDQDVSASINRFKLKNRTAASSANSAVIAAGSSKS-SVKASKDDPKYKVSLLVVRSSKS 86
+G S + F+ A A G SKS V+ + D + +
Sbjct: 68 TGAITGSQTTASFEYGQGGLYQMEIEACDATGCSKSAPVEITIADTDGSHLKPLTMNVDP 127
Query: 87 SVKANKDDSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFES 146
+ K+ D + Y+ W Y + +++ D THI++ F + S
Sbjct: 128 NNKSYNTDPSIVMGTYFVEWGIYG---RDYTVDNMPVDNLTHILYGFIPICGPNESVKSV 184
Query: 147 NDET-----------KDGKV-------------------------GLYERIEQLKKANPK 170
+ D +V G Y + LK+ NP
Sbjct: 185 GGNSFNALQTACRGVNDYEVVIHDPWAAYQKSFPQAGHEYSTPIKGNYAMLMALKQRNPD 244
Query: 171 LKTLLAIG 178
LK + +IG
Sbjct: 245 LKIIPSIG 252
Score = 93.0 bits (231), Expect = 1e-19
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query: 266 RNGAGYVWDDEMKVPYLVHGD--QWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMDDFT 323
NG Y +D + + P++ + + + FDD +S+ K N+ K G G W +D D+
Sbjct: 498 INGFEYGYDAQAEAPWVWNRSTGELITFDDHRSVLAKGNYAKSLGLAGLFSWEIDADNGD 557
Query: 324 GTVCGGDVKYPLIGAMREELNG 345
++ AM E + G
Sbjct: 558 -----------ILNAMHEGMAG 568
Score = 92.3 bits (229), Expect = 2e-19
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 862 SYQKKLTVDLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 921
+ + LT+A+ ++ I D + +Y+D+I MTYDF+G W GH + L
Sbjct: 328 ELEAETGRTYELTSAIGVGYDKIE-DVDYADAVQYMDYIFAMTYDFYGGWNNVPGHQTAL 386
Score = 46.8 bits (111), Expect = 3e-05
Identities = 6/34 (17%), Positives = 12/34 (35%), Gaps = 3/34 (8%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ Y W + +N+ TH++Y
Sbjct: 140 MGTYFVEWGIYGR---DYTVDNMPVDNLTHILYG 170
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure
initiative, NEW YORK SGX research center for STRU
genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron}
PDB: 3co4_A
Length = 312
Score = 301 bits (774), Expect = 9e-95
Identities = 65/344 (18%), Positives = 128/344 (37%), Gaps = 65/344 (18%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLK-DHKLTLNEDKEKDEAGKFEA 437
+ Y+ I+ K TH+ +F +K D L +N + E+
Sbjct: 6 VIGYLALDDWEFESL----FPTIEWKYLTHINASFARVKADGTLNIN-----PVRKRIES 56
Query: 438 LMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDW 497
+ ++KIL+++ + G F + + + + I F +E+K +G D+D+
Sbjct: 57 VR-ETAHKHNVKILISLAKNSPG--EFTTAINDPKARKELIQQIIAFTKEYKLDGFDIDY 113
Query: 498 EYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKY 557
E + ++ +LL R + + K +L+T AV + + ++ +Y
Sbjct: 114 EEY--DNWDKNFPSLLVFARGLYLAKEK-----NMLMTCAVNSRWLNYGTEWE-----QY 161
Query: 558 LDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIG 617
D+IN+M+YD ++ V H S ++ + + A K K++ G
Sbjct: 162 FDYINLMSYDRGAFTDKPVQHASYDDFVKDLKYW------------NEQCRASKSKIVGG 209
Query: 618 MPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWDNEQ 677
+P YG S+ G + + Y + L N DN
Sbjct: 210 LPFYGYSWEESLQ----------GAVDDVRGI------RYSGILKHL--GNEAADKDN-- 249
Query: 678 QVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
++ ++ K ++KE+ Y G+MIW + D
Sbjct: 250 --------IGKTYYNGRPTIANKCKFIKENDYAGVMIWQLFQDA 285
Score = 128 bits (325), Expect = 6e-33
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 723 STPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAF 782
F + + + + I F +E+K +G D+D+E + ++ +LL R +
Sbjct: 77 PGEFTTAINDPKARKELIQQIIAFTKEYKLDGFDIDYEEY--DNWDKNFPSLLVFARGLY 134
Query: 783 EGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNS 842
+ K +L+T AV + + ++ +Y D+IN+M+YD ++ V H S
Sbjct: 135 LAKEK-----NMLMTCAVNSRWLNYGTEWE-----QYFDYINLMSYDRGAFTDKPVQHAS 184
Query: 843 PL 844
Sbjct: 185 YD 186
Score = 87.0 bits (216), Expect = 1e-18
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 13/89 (14%)
Query: 263 EMLRNGAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMDDF 322
+L++ D ++ +I K ++K+N Y G M+W + D
Sbjct: 235 GILKHLGNEAADK--------DNIGKTYYNGRPTIANKCKFIKENDYAGVMIWQLFQDAH 286
Query: 323 TGTVCGGDVKYPLIGAMREELNGIPRANN 351
+ LI + E+ ++
Sbjct: 287 -----NDNYDLKLINVVGREMMEEGHHHH 310
Score = 80.4 bits (199), Expect = 2e-16
Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 22/89 (24%)
Query: 95 SKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKDGK 154
S V+ Y + IE THI +F +K DG
Sbjct: 2 SLKVVIGYLALDDWEF----ESLFPTIEWKYLTHINASFARVK-------------ADGT 44
Query: 155 V---GLYERIEQL--KKANPKLKTLLAIG 178
+ + +RIE + +K L+++
Sbjct: 45 LNINPVRKRIESVRETAHKHNVKILISLA 73
Score = 73.1 bits (180), Expect = 6e-14
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 870 DLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 921
++L+T AV + + ++ +Y D+IN+M+YD ++ V H S
Sbjct: 140 NMLMTCAVNSRWLNYGTEWE-----QYFDYINLMSYDRGAFTDKPVQHASYD 186
Score = 45.4 bits (108), Expect = 6e-05
Identities = 5/34 (14%), Positives = 10/34 (29%), Gaps = 4/34 (11%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ Y+ I+ K TH+ +
Sbjct: 6 VIGYLALDDWEFESL----FPTIEWKYLTHINAS 35
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural
genomics, uncharacterized protein, protein struct
initiative, PSI-2; 2.20A {Bacillus subtilis subsp}
Length = 319
Score = 292 bits (750), Expect = 3e-91
Identities = 60/355 (16%), Positives = 122/355 (34%), Gaps = 53/355 (14%)
Query: 375 IKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGK 434
+ I ++ + P + + P + I+ + + + ++ D A
Sbjct: 3 LSNYIAGTLSFYVLRNPDLDRELINDYAPYSSSISIFEYHIAPNGDIA---NQLNDAAAI 59
Query: 435 FEALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLD 494
+ + + + + F + ++ N V + + + G+
Sbjct: 60 ETTW---QRRVTPLATITNLTSGGFSTEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVT 116
Query: 495 VDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEA---IAAGYDV 551
+D+E A DR + L++LR + +LT AVPA GYD
Sbjct: 117 IDFEQV-SAADRDLFTGFLRQLRDRLQAG-------GYVLTIAVPAKTSDNIPWLRGYDY 168
Query: 552 PEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPK 611
I ++++ +M YD+H + G +P+ + + + + P
Sbjct: 169 GGIGAVVNYMFIMAYDWHHAGS-EPGPVAPITE------------IRRTIEFTIA-QVPS 214
Query: 612 EKLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTL 671
K++IG+P YG + + P G A +S + + +
Sbjct: 215 RKIIIGVPLYGYDWII----------PYQPGT-------VASAISNQNAIERAMRYQAPI 257
Query: 672 VWDNEQQVPFAYKDDQ-----WVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
+ E Q PF DQ V F+ RS+ KM ++E I W + + +
Sbjct: 258 QYSAEYQSPFFRYSDQQGRTHEVWFEGVRSMSRKMQIVREYRLQAIGAWQLTLAE 312
Score = 132 bits (335), Expect = 3e-34
Identities = 32/175 (18%), Positives = 64/175 (36%), Gaps = 14/175 (8%)
Query: 679 VPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGI-MIWSVDMDDLST-PFKELTGNVFRM 736
F Y ++ + ++ + + I ++ ST ++ N
Sbjct: 37 SIFEYHIAPNGDIANQLNDAAAIETTWQRRVTPLATITNLTSGGFSTEIVHQVLNNPTAR 96
Query: 737 NQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLL 796
V + + + G+ +D+E A DR + L++LR + +L
Sbjct: 97 TNLVNNIYDLVSTRGYGGVTIDFEQV-SAADRDLFTGFLRQLRDRLQAG-------GYVL 148
Query: 797 TAAVPASFEA---IAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLE 848
T AVPA GYD I ++++ +M YD+H + G +P+ +
Sbjct: 149 TIAVPAKTSDNIPWLRGYDYGGIGAVVNYMFIMAYDWHHAGS-EPGPVAPITEIR 202
Score = 88.2 bits (219), Expect = 5e-19
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 254 ALSTPRRVCEMLRNGAGYVWDDEMKVPYLVHGDQ-----WVGFDDEKSIRYKMNWLKDNG 308
A+S + +R A + E + P+ + DQ V F+ +S+ KM +++
Sbjct: 240 AISNQNAIERAMRYQAPIQYSAEYQSPFFRYSDQQGRTHEVWFEGVRSMSRKMQIVREYR 299
Query: 309 YGGAMVWTVDMDDF 322
W + + +
Sbjct: 300 LQAIGAWQLTLAEG 313
Score = 78.6 bits (194), Expect = 9e-16
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 871 LLLTAAVPASFEA---IAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEAN 927
+LT AVPA GYD I ++++ +M YD+H + G +P+ +
Sbjct: 146 YVLTIAVPAKTSDNIPWLRGYDYGGIGAVVNYMFIMAYDWHHAGS-EPGPVAPITEIRRT 204
Query: 928 V 928
+
Sbjct: 205 I 205
Score = 46.6 bits (111), Expect = 2e-05
Identities = 9/84 (10%), Positives = 25/84 (29%), Gaps = 10/84 (11%)
Query: 95 SKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKDGK 154
S Y + + + + D P + IF + G +++ ++ +
Sbjct: 4 SNYIA-GTLSFYVLRNPDLDRELINDYAPYSSSISIFEYHIAPNGDIANQLNDAAAIE-- 60
Query: 155 VGLYERIEQLKKANPKLKTLLAIG 178
++ L T+ +
Sbjct: 61 -------TTWQRRVTPLATITNLT 77
Score = 33.5 bits (77), Expect = 0.30
Identities = 4/40 (10%), Positives = 12/40 (30%)
Query: 217 IKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYALS 256
+ I ++ + P + + P + I+
Sbjct: 3 LSNYIAGTLSFYVLRNPDLDRELINDYAPYSSSISIFEYH 42
Score = 29.3 bits (66), Expect = 6.3
Identities = 7/28 (25%), Positives = 9/28 (32%), Gaps = 1/28 (3%)
Query: 227 SWSQARPGAGKFGPENIDPKLCTHVIYA 254
S S G F +P L +I
Sbjct: 2 SLSNYIAGTLSFYVLR-NPDLDRELIND 28
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM
barrel, chitin binding, glyco hydrolase, hydrolase;
2.10A {Crocus vernus}
Length = 275
Score = 245 bits (626), Expect = 3e-74
Identities = 42/295 (14%), Positives = 95/295 (32%), Gaps = 37/295 (12%)
Query: 383 MTSWSQARPGAG-KFGPENIDPKLCT-HVIYAFGTLKDHKLTLNEDKEK------DEAGK 434
+ +G KF I+P + + +F K
Sbjct: 3 FVEYIGYPLFSGVKFSDVPINPHITKFQFVLSFAVDYTASSPHTSTNGKFNVFWDSSILG 62
Query: 435 FEALMQLREKNPDIKILLAIGGWAFGSTPF-KELTGNVFRMNQFVYESIEFLREHKFNGL 493
+ + ++ +P++++ +++GG + GS + ++ V ++ + +G+
Sbjct: 63 PDQISAIKSSHPNVRVAVSLGGASVGSNTVQFQAASVDSWVSNAVTSLTRIIQRYNLDGI 122
Query: 494 DVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPE 553
D+D+E+ + D+ ++ + L + +++ A + F ++ Y +
Sbjct: 123 DIDYEHFQ-NTDKNTFAECIGRLITTLK--------KNGVISFASISPFPSVD-EYYLAL 172
Query: 554 ISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEK 613
++Y + IN + Y F + L A S K V G
Sbjct: 173 FNEYKNAINHINYQFKAYDS-STSVDKFLGYYNNAASKYKGGNVLI----SFSTGPHPGG 227
Query: 614 LMIGMPTYGRSFTLVDPTK----FDIGAPASGGGEPGKYTAEAGFMSYYEVCDFL 664
L + + + +L + K A S F E FL
Sbjct: 228 LPVDKGFFDAATSLKNKGKLHGIAVWTADTSKSS---------DFRYEEEAQAFL 273
Score = 117 bits (296), Expect = 2e-29
Identities = 24/191 (12%), Positives = 68/191 (35%), Gaps = 28/191 (14%)
Query: 663 FLKKDNTTLVWDNEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMI----WSVD 718
F + + + D +G D ++K ++ + + SV
Sbjct: 35 FAVDYTASSPHTSTNGKFNVFWDSSILGPDQISAIKSSHPNVR------VAVSLGGASVG 88
Query: 719 MDDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKEL 778
+T + ++ V ++ + +G+D+D+E+ + D+ ++ + L
Sbjct: 89 S---NTVQFQAASVDSWVSNAVTSLTRIIQRYNLDGIDIDYEHFQ-NTDKNTFAECIGRL 144
Query: 779 RLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQ----- 833
+ +++ A + F ++ Y + ++Y + IN + Y F
Sbjct: 145 ITTLK--------KNGVISFASISPFPSVD-EYYLALFNEYKNAINHINYQFKAYDSSTS 195
Query: 834 WERQVGHNSPL 844
++ +G+ +
Sbjct: 196 VDKFLGYYNNA 206
Score = 82.9 bits (205), Expect = 2e-17
Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Query: 103 YTNWSQYRTKIG-KFQPEDIEPDLCT-HIIFAFGWLKKGKLSSFESN---DETKDGKVGL 157
+ + Y G KF I P + + +F +N + D +
Sbjct: 3 FVEYIGYPLFSGVKFSDVPINPHITKFQFVLSFAVDYTASSPHTSTNGKFNVFWDSSILG 62
Query: 158 YERIEQLKKANPKLKTLLAIG 178
++I +K ++P ++ +++G
Sbjct: 63 PDQISAIKSSHPNVRVAVSLG 83
Score = 64.4 bits (157), Expect = 2e-11
Identities = 9/57 (15%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 870 DLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQ-----WERQVGHNSPL 921
+ +++ A + F ++ Y + ++Y + IN + Y F ++ +G+ +
Sbjct: 151 NGVISFASISPFPSVD-EYYLALFNEYKNAINHINYQFKAYDSSTSVDKFLGYYNNA 206
Score = 52.5 bits (126), Expect = 2e-07
Identities = 10/61 (16%), Positives = 18/61 (29%), Gaps = 4/61 (6%)
Query: 225 MTSWSQARPGAG-KFGPENIDPKLCT-HVIY--ALSTPRRVCEMLRNGAGYVWDDEMKVP 280
+ +G KF I+P + + A+ NG V+ D +
Sbjct: 3 FVEYIGYPLFSGVKFSDVPINPHITKFQFVLSFAVDYTASSPHTSTNGKFNVFWDSSILG 62
Query: 281 Y 281
Sbjct: 63 P 63
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome,
secreted, hydrolase; 2.70A {Homo sapiens}
Length = 393
Score = 216 bits (551), Expect = 2e-62
Identities = 53/363 (14%), Positives = 119/363 (32%), Gaps = 59/363 (16%)
Query: 370 TKPAPIKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEK 429
+ D+ Y+T W+ + + T + + LK + E
Sbjct: 72 ARDRHFAGDVLGYVTPWNSHG-----YDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGL 126
Query: 430 DEAGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHK 489
+ + + +R+ + I+ + + F+ + + + + ++ +
Sbjct: 127 HDVDQ-GWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQVAKNQH 185
Query: 490 FNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIA--- 546
F+G V+ + R +++L L A RLL +P +
Sbjct: 186 FDGFVVEVWNQLLSQKRVGLIHMLTHLAEALHQA-------RLLALLVIPPAITPGTDQL 238
Query: 547 ---AGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKE 603
+ +++ LD ++MTYD+ + G N+PL V +
Sbjct: 239 GMFTHKEFEQLAPVLDGFSLMTYDYSTAHQ--PGPNAPLSW------------VRACVQV 284
Query: 604 WVKQGAPKEKLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDF 663
+ + K+++G+ YG + +
Sbjct: 285 LDPKSKWRSKILLGLNFYGMDYATSKDA--------------------REPVVGARYIQT 324
Query: 664 LKKDNTTLVWDNEQQVP-FAYKDDQ----WVGFDDERSLKMKMDWLKEDGYGGIMIWSVD 718
LK +VWD++ F YK + V + +SL+++++ +E G G+ IW +
Sbjct: 325 LKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGV-GVSIWELG 383
Query: 719 MDD 721
Sbjct: 384 QGL 386
Score = 97.4 bits (242), Expect = 1e-21
Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 723 STPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAF 782
F+ + + + + ++ + F+G V+ + R +++L L A
Sbjct: 157 YDDFRNVLDSEDEIEELSKTVVQVAKNQHFDGFVVEVWNQLLSQKRVGLIHMLTHLAEAL 216
Query: 783 EGEAKTSGEPRLLLTAAVPASFEAIA------AGYDVPEISKYLDFINVMTYDFHGQWER 836
RLL +P + + +++ LD ++MTYD+ +
Sbjct: 217 HQA-------RLLALLVIPPAITPGTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQ- 268
Query: 837 QVGHNSPLKPLE 848
G N+PL +
Sbjct: 269 -PGPNAPLSWVR 279
Score = 61.6 bits (149), Expect = 5e-10
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 6/73 (8%)
Query: 254 ALSTPRRVCEMLRNGAGYVWDDEMKVPYLVH-----GDQWVGFDDEKSIRYKMNWLKDNG 308
+ R + + + VWD + + + G V + KS++ ++ ++ G
Sbjct: 315 PVVGARYIQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELG 374
Query: 309 YGGAMVWTVDMDD 321
G +W +
Sbjct: 375 VGV-SIWELGQGL 386
Score = 58.5 bits (141), Expect = 4e-09
Identities = 18/107 (16%), Positives = 39/107 (36%), Gaps = 8/107 (7%)
Query: 825 VMTYDFHG---QWERQVGHNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPASF 881
F G + Q+ S + + ++T L+ + + +
Sbjct: 181 AKNQHFDGFVVEVWNQL--LSQKRVGLIHMLTHLA-EALHQARLLALLVIPPAITPGTDQ 237
Query: 882 EAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEANV 928
+ + +++ LD ++MTYD+ + G N+PL + A V
Sbjct: 238 LGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQ--PGPNAPLSWVRACV 282
Score = 36.9 bits (85), Expect = 0.028
Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 14/138 (10%)
Query: 43 KNRTAASSANSAVIAAGSSKSSVKASKDDPKYKVSLLVVRSSKSSVKANKDDSKYRVVCY 102
+ A+ + + D K + S+++ S S KA V+ Y
Sbjct: 26 AKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAE-SVVLEHRSYCSAKARDRHFAGDVLGY 84
Query: 103 YTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKK--GKLSSFESNDETKDGKVGLYER 160
T W+ + + + T I + LK+ ++ + G
Sbjct: 85 VTPWNSHG-----YDVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQG------W 133
Query: 161 IEQLKKANPKLKTLLAIG 178
+ ++K L + +
Sbjct: 134 MRAVRKHAKGLHIVPRLL 151
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase
(glucosidase); 1.90A {Streptomyces plicatus} SCOP:
c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A
1c93_A
Length = 271
Score = 166 bits (422), Expect = 2e-46
Identities = 43/284 (15%), Positives = 91/284 (32%), Gaps = 32/284 (11%)
Query: 372 PAPIKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHK------LTLNE 425
P Y+ + + GK+ + + + L NE
Sbjct: 4 PVKQGPTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFAANINYDTGTKTAYLHFNE 63
Query: 426 DKEKDEAGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFL 485
+ ++ + L + IK+LL++ G F + F + + +
Sbjct: 64 NVQRVLDNAVTQIRPL--QQQGIKVLLSVLGNH-QGAGFANFPSQQAA-SAFAKQLSDAV 119
Query: 486 REHKFNGLDVDWEYPRGAD------DRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVP 539
++ +G+D D EY + + +S+V+L+ LR P +++
Sbjct: 120 AKYGLDGVDFDDEYAEYGNNGTAQPNDSSFVHLVTALRANM---------PDKIISLYNI 170
Query: 540 ASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQK--KLTV 597
A Y ++S D+ ++G W+ + A + + TV
Sbjct: 171 GP-AASRLSYGGVDVSDKFDY---AWNPYYGTWQVPGIALPKAQLSPAAVEIGRTSRSTV 226
Query: 598 EYSAKEWVKQGAPKEKLMIGMPTYGRSFTLVDPTKFDIGAPASG 641
A+ V +G L + R+ + T+ G+ A
Sbjct: 227 ADLARRTVDEG-YGVYLTYNLDGGDRTADVSAFTRELYGSEAVR 269
Score = 98.1 bits (244), Expect = 9e-23
Identities = 26/180 (14%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 673 WDNEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGI-MIWSVDMDDLSTPFKELTG 731
+D + + + ++ + +R L + ++ GI ++ SV + F
Sbjct: 50 YDTGTKTAYLHFNE-----NVQRVLDNAVTQIRPLQQQGIKVLLSVLGNHQGAGFANFPS 104
Query: 732 NVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGAD------DRASYVNLLKELRLAFEGE 785
+ F + + + ++ +G+D D EY + + +S+V+L+ LR
Sbjct: 105 QQAA-SAFAKQLSDAVAKYGLDGVDFDDEYAEYGNNGTAQPNDSSFVHLVTALRANM--- 160
Query: 786 AKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLK 845
P +++ A Y ++S D+ ++G W+ +
Sbjct: 161 ------PDKIISLYNIGP-AASRLSYGGVDVSDKFDY---AWNPYYGTWQVPGIALPKAQ 210
Score = 69.6 bits (170), Expect = 5e-13
Identities = 10/90 (11%), Positives = 26/90 (28%), Gaps = 1/90 (1%)
Query: 90 ANKDDSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDE 149
V Y + +GK+ D + + + +
Sbjct: 2 PAPVKQGPTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFAANINYDTGTKTAYLHF 61
Query: 150 TKDGKVGLYERIEQLKKA-NPKLKTLLAIG 178
++ + L + Q++ +K LL++
Sbjct: 62 NENVQRVLDNAVTQIRPLQQQGIKVLLSVL 91
Score = 50.4 bits (120), Expect = 1e-06
Identities = 7/53 (13%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Query: 870 DLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLK 922
D +++ A Y ++S D+ ++G W+ +
Sbjct: 162 DKIISLYNIGP-AASRLSYGGVDVSDKFDY---AWNPYYGTWQVPGIALPKAQ 210
Score = 41.5 bits (97), Expect = 8e-04
Identities = 4/41 (9%), Positives = 10/41 (24%)
Query: 214 PAPIKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
P Y+ + + GK+ + +
Sbjct: 4 PVKQGPTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIF 44
Score = 30.3 bits (68), Expect = 2.9
Identities = 6/30 (20%), Positives = 13/30 (43%)
Query: 701 MDWLKEDGYGGIMIWSVDMDDLSTPFKELT 730
++GYG + +++D D + T
Sbjct: 230 ARRTVDEGYGVYLTYNLDGGDRTADVSAFT 259
Score = 29.6 bits (66), Expect = 5.5
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 296 SIRYKMNWLKDNGYGGAMVWTVDMDDFTGTVCG 328
++ D GYG + + +D D T V
Sbjct: 225 TVADLARRTVDEGYGVYLTYNLDGGDRTADVSA 257
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A
{Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A*
3n18_A* 3n1a_A*
Length = 333
Score = 160 bits (406), Expect = 2e-43
Identities = 60/356 (16%), Positives = 113/356 (31%), Gaps = 65/356 (18%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEAL 438
+ Y W G G +++ PK + +FG + T+ F++
Sbjct: 9 LVGY---WHNFDNGTGIIKLKDVSPKW-DVINVSFGETGGDRSTVEFSPVYGTDADFKSD 64
Query: 439 MQ-LREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDW 497
+ L+ K K++L+IGG L N + ++F+ + ++ F+G+D+D
Sbjct: 65 ISYLKSKG--KKVVLSIGGQNGVVL----LPDNAAK-DRFINSIQSLIDKYGFDGIDIDL 117
Query: 498 EYP---------RGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAG 548
E VNL+ +R P LL+ A ++ + G
Sbjct: 118 ESGIYLNGNDTNFKNPTTPQIVNLISAIR-----TISDHYGPDFLLSMAPETAY--VQGG 170
Query: 549 YDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQG 608
Y Y +G ++ + Y+ +
Sbjct: 171 YS-----AYGSIWGAYLPIIYGVKDKLTYIHVQHYNAGSGIGMD---GNNYNQGTADYEV 222
Query: 609 APKEKLMIGMPTYG---RSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLK 665
A + L+ G P G F + + IG PA+ G++S E+ L
Sbjct: 223 AMADMLLHGFPVGGNANNIFPALRSDQVMIGLPAAPAA-----APSGGYISPTEMKKALN 277
Query: 666 KDNTTLVWDNEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
+ V F + L + + + G+M WS++ D
Sbjct: 278 YII------------------KGVPFGGKYKLSNQSGY---PAFRGLMSWSINWDA 312
Score = 75.0 bits (184), Expect = 2e-14
Identities = 30/210 (14%), Positives = 69/210 (32%), Gaps = 32/210 (15%)
Query: 737 NQFVYESIEFLREHKFNGLDVDWEYP---------RGADDRASYVNLLKELRLAFEGEAK 787
++F+ + ++ F+G+D+D E VNL+ +R
Sbjct: 95 DRFINSIQSLIDKYGFDGIDIDLESGIYLNGNDTNFKNPTTPQIVNLISAIR-----TIS 149
Query: 788 TSGEPRLLLTAAVPASFEAIAAG----------YDVPEISKYLDFINVMTYDFHGQWERQ 837
P LL+ A ++ + + L +I+V Y+
Sbjct: 150 DHYGPDFLLSMAPETAYVQGGYSAYGSIWGAYLPIIYGVKDKLTYIHVQHYNAGSGIGMD 209
Query: 838 VGHNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAA-----VPASFEAIAAGYDVP- 891
+ + + + + + G + L + +PA+ A +G +
Sbjct: 210 GNNYNQGTADYEVAMADMLLHGFPVGGNANNIFPALRSDQVMIGLPAAPAAAPSGGYISP 269
Query: 892 -EISKYLDFI-NVMTYDFHGQWERQVGHNS 919
E+ K L++I + + + Q G+ +
Sbjct: 270 TEMKKALNYIIKGVPFGGKYKLSNQSGYPA 299
Score = 52.3 bits (125), Expect = 4e-07
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 96 KYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKDGKV 155
+V Y W + G + +D+ P I +F G S+ E +
Sbjct: 6 SKLLVGY---WHNFDNGTGIIKLKDVSPKW-DVINVSF-GETGGDRSTVEFSPVY-GTDA 59
Query: 156 GLYERIEQLKKANPKLKTLLAIG 178
I LK K +L+IG
Sbjct: 60 DFKSDISYLKSKG--KKVVLSIG 80
Score = 49.2 bits (117), Expect = 4e-06
Identities = 8/75 (10%), Positives = 23/75 (30%), Gaps = 4/75 (5%)
Query: 268 GAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMDDFTGTVC 327
+G L + + V F + + + + + G M W+++ D
Sbjct: 262 PSGGYISPTEMKKALNYIIKGVPFGGKYKLSNQSGY---PAFRGLMSWSINWDAKNNFEF 318
Query: 328 GGDVKYPLIGAMREE 342
+ + + +
Sbjct: 319 SNNYR-TYFDGLSLQ 332
Score = 34.2 bits (78), Expect = 0.18
Identities = 6/34 (17%), Positives = 12/34 (35%), Gaps = 4/34 (11%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ Y W G G +++ PK + +
Sbjct: 9 LVGY---WHNFDNGTGIIKLKDVSPKW-DVINVS 38
Score = 31.5 bits (71), Expect = 1.2
Identities = 8/64 (12%), Positives = 18/64 (28%), Gaps = 10/64 (15%)
Query: 870 DLLLTAAVPASFEAIAAG----------YDVPEISKYLDFINVMTYDFHGQWERQVGHNS 919
D LL+ A ++ + + L +I+V Y+ + +
Sbjct: 155 DFLLSMAPETAYVQGGYSAYGSIWGAYLPIIYGVKDKLTYIHVQHYNAGSGIGMDGNNYN 214
Query: 920 PLKP 923
Sbjct: 215 QGTA 218
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A
{Aspergillus fumigatus}
Length = 290
Score = 133 bits (337), Expect = 9e-35
Identities = 42/246 (17%), Positives = 87/246 (35%), Gaps = 35/246 (14%)
Query: 379 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEAL 438
+ CY + R P + TH+I A L + + + + + + L
Sbjct: 15 VICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIAAFHLNEDPGHITLNDDPPDHEMYNPL 74
Query: 439 M-QLRE-KNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVD 496
++ K +K++ +GG A GS ++ L G+ + ++ + +R H+ +GLD+D
Sbjct: 75 WAEVPVLKRSGVKVMGMLGGAAQGS--YRCLDGDQEKFERYYQPLLAMVRRHQLDGLDLD 132
Query: 497 WEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGY--DVPEI 554
E + L+ L+L + + P + AA+ Y +
Sbjct: 133 VEEEMSLPG---IIRLIDRLKLDLGDDFIITLAP---VAAALLGIGNLSGFDYRQLEQQR 186
Query: 555 SKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKL 614
+ + N Y+ G E + + V QG +++
Sbjct: 187 GSKISWYNAQFYNGWGLAEDPRMYAA-----------------------IVAQGWSPQRV 223
Query: 615 MIGMPT 620
+ G+ T
Sbjct: 224 VYGLLT 229
Score = 76.9 bits (189), Expect = 2e-15
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 94 DSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKDG 153
RV+CY+ R P THII A L + ++D
Sbjct: 10 PEHRRVICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIAAFHLNEDPGHITLNDDPPDHE 69
Query: 154 KVG-LYERIEQLKKANPKLKTLLAIG 178
L+ + LK++ +K + +G
Sbjct: 70 MYNPLWAEVPVLKRSG--VKVMGMLG 93
Score = 60.7 bits (147), Expect = 5e-10
Identities = 20/119 (16%), Positives = 44/119 (36%), Gaps = 8/119 (6%)
Query: 726 FKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEGE 785
++ L G+ + ++ + +R H+ +GLD+D E + L+ L+L +
Sbjct: 100 YRCLDGDQEKFERYYQPLLAMVRRHQLDGLDLDVEEEMSLPG---IIRLIDRLKLDLGDD 156
Query: 786 AKTSGEPRLLLTAAVPASFEAIAAGY--DVPEISKYLDFINVMTYDFHGQWERQVGHNS 842
+ P + AA+ Y + + + N Y+ G E + +
Sbjct: 157 FIITLAP---VAAALLGIGNLSGFDYRQLEQQRGSKISWYNAQFYNGWGLAEDPRMYAA 212
Score = 46.1 bits (109), Expect = 3e-05
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 221 IFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYA 254
+ CY + R P + TH+I A
Sbjct: 15 VICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIA 48
Score = 29.5 bits (66), Expect = 4.7
Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Query: 870 DLLLTAAVPASF---EAIAAGYDVPE----ISKYLDFINVMTYDFHGQWERQVGHNS 919
D ++T A A+ +G+D + + + N Y+ G E + +
Sbjct: 156 DFIITLAPVAAALLGIGNLSGFDYRQLEQQRGSKISWYNAQFYNGWGLAEDPRMYAA 212
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP:
c.1.8.5
Length = 290
Score = 133 bits (336), Expect = 1e-34
Identities = 44/258 (17%), Positives = 88/258 (34%), Gaps = 41/258 (15%)
Query: 402 DPKLCTHVIYAFGTLKDHKLTLN----EDKEKDEAGKFEALMQLREKNPDIKILLAIGGW 457
L H I F ++ E+ E E + L+ ++P++K++++IGG
Sbjct: 28 TETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEKVKNLKRRHPEVKVVISIGGR 87
Query: 458 AFGSTPFKELTGNVFRMN-----QFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNL 512
+TPF NV+ N + + + + +G+D+ +E+ R + + L
Sbjct: 88 GV-NTPFDPAEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHYEHIRSDEP---FATL 143
Query: 513 LKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQW 572
+ +L K + + + + P+ + + + D+IN + Y F Q
Sbjct: 144 MGQLITEL----KKDDDLNINVVSIAPS---ENNSSHYQKLYNAKKDYINWVDYQFSNQQ 196
Query: 573 ERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTYGR--SFTLVDP 630
P+ + K L +Y K++ G T +
Sbjct: 197 -------KPVSTDDAFVEIFKSLEKDY----------HPHKVLPGFSTDPLDTKHNKITR 239
Query: 631 TKFDIGAP--ASGGGEPG 646
F G PG
Sbjct: 240 DIFIGGCTRLVQTFSLPG 257
Score = 81.7 bits (201), Expect = 6e-17
Identities = 26/163 (15%), Positives = 64/163 (39%), Gaps = 22/163 (13%)
Query: 685 DDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDDLSTPFKELTGNVFRMN-----QF 739
D + G + ++LK + +K ++ S+ ++TPF NV+ N +
Sbjct: 59 DVELFGPEKVKNLKRRHPEVK-------VVISIGGRGVNTPFDPAEENVWVSNAKESLKL 111
Query: 740 VYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAA 799
+ + + +G+D+ +E+ R + + L+ +L K + + + +
Sbjct: 112 IIQKYSDDSGNLIDGIDIHYEHIRSDEP---FATLMGQLITEL----KKDDDLNINVVSI 164
Query: 800 VPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNS 842
P+ + + + D+IN + Y F Q + ++
Sbjct: 165 APS---ENNSSHYQKLYNAKKDYINWVDYQFSNQQKPVSTDDA 204
Score = 52.0 bits (124), Expect = 4e-07
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 103 YTNWSQYRTKIGKFQPEDI-EPDLCTHIIFAFGWLKKGKLSSFESN-DETKDGKVGLYER 160
Y T + F E I L H I F + +E+ D ++ E+
Sbjct: 8 YIGVKPNSTTLHDFPTEIINTETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEK 67
Query: 161 IEQLKKANPKLKTLLAIG 178
++ LK+ +P++K +++IG
Sbjct: 68 VKNLKRRHPEVKVVISIG 85
Score = 48.2 bits (114), Expect = 7e-06
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 870 DLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNS 919
DL + A + + + D+IN + Y F Q + ++
Sbjct: 156 DLNINVVSIAPS-ENNSSHYQKLYNAKKDYINWVDYQFSNQQKPVSTDDA 204
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A
{Elizabethkingia meningoseptica} SCOP: c.1.8.5
Length = 289
Score = 126 bits (318), Expect = 3e-32
Identities = 45/269 (16%), Positives = 81/269 (30%), Gaps = 41/269 (15%)
Query: 369 VTKPAPIKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLT------ 422
VT I +F + F +N L V+ +
Sbjct: 2 VTGTTKANIKLFSFTEVNDTNPLNNLNFTLKNSGKPLVDMVVLFSANINYDAANDKVFVS 61
Query: 423 LNEDKEKDEAGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESI 482
N + + + + L L++K IK++L+I G S L+ R F E
Sbjct: 62 NNPNVQHLLTNRAKYLKPLQDKG--IKVILSILGNHDRSG-IANLSTA--RAKAFAQELK 116
Query: 483 EFLREHKFNGLDVDWEYP---------RGADDRASYVNLLKELRLAFEGEAKTSGEPRLL 533
+ +G+ D EY + L E + A P L
Sbjct: 117 NTCDLYNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYETKQAM---------PNKL 167
Query: 534 LTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQK 593
+T V + + D Y+D+ +D+ G ++ + K +S
Sbjct: 168 VTVYVYSRTSSFPTAVDGVNAGSYVDY---AIHDYGGSYDLATNYPGLAKSGMVMSS--- 221
Query: 594 KLTVEYSAKEWVKQGAPKEKLMIGMPTYG 622
E++ + A + + G YG
Sbjct: 222 ---QEFNQGRYATAQALRNIVTKG---YG 244
Score = 85.1 bits (210), Expect = 3e-18
Identities = 19/119 (15%), Positives = 34/119 (28%), Gaps = 21/119 (17%)
Query: 736 MNQFVYESIEFLREHKFNGLDVDWEYP---------RGADDRASYVNLLKELRLAFEGEA 786
F E + +G+ D EY + L E + A
Sbjct: 108 AKAFAQELKNTCDLYNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYETKQAM---- 163
Query: 787 KTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLK 845
P L+T V + + D Y+D+ +D+ G ++ + K
Sbjct: 164 -----PNKLVTVYVYSRTSSFPTAVDGVNAGSYVDY---AIHDYGGSYDLATNYPGLAK 214
Score = 49.3 bits (117), Expect = 3e-06
Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Query: 870 DLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLK 922
+ L+T V + + D Y+D+ +D+ G ++ + K
Sbjct: 165 NKLVTVYVYSRTSSFPTAVDGVNAGSYVDY---AIHDYGGSYDLATNYPGLAK 214
Score = 46.6 bits (110), Expect = 2e-05
Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 1/87 (1%)
Query: 93 DDSKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDETKD 152
+ ++ + F ++ L ++ + + +
Sbjct: 6 TKANIKLFSFTEVNDTNPLNNLNFTLKNSGKPLVDMVVLFSANINYDAANDKVFVSNNPN 65
Query: 153 GKVGLYERIEQLKKA-NPKLKTLLAIG 178
+ L R + LK + +K +L+I
Sbjct: 66 VQHLLTNRAKYLKPLQDKGIKVILSIL 92
Score = 35.1 bits (80), Expect = 0.10
Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 15/90 (16%)
Query: 211 VTKPAPIKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYALSTPRRVCEMLRNGAG 270
VT I +F + F +N L V+ +
Sbjct: 2 VTGTTKANIKLFSFTEVNDTNPLNNLNFTLKNSGKPLVDMVVLFSANIN----------- 50
Query: 271 YVWDDEMKVPYLVHGD--QWVGFDDEKSIR 298
+D ++ + Q + + K ++
Sbjct: 51 --YDAANDKVFVSNNPNVQHLLTNRAKYLK 78
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2,
protein structure initiative; 1.75A {Lactococcus lactis
subsp}
Length = 321
Score = 111 bits (278), Expect = 1e-26
Identities = 56/351 (15%), Positives = 110/351 (31%), Gaps = 80/351 (22%)
Query: 381 CYMTSWSQA-----RPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKF 435
Y +W + G+ + + + +F + + +F
Sbjct: 9 GYWHNWKSTGKDGYKGGSSADFNLSSTQEGYNVINVSFMKTPEGQTLPTFKPYNKTDTEF 68
Query: 436 EALM-QLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLD 494
A + +L + +L+A+GG L + + + FV E I + + F+GLD
Sbjct: 69 RAEISKLNAEG--KSVLIALGGADAHIE----LKKS--QESDFVNEIIRLVDTYGFDGLD 120
Query: 495 VDWEYP--RGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGY--D 550
+D E AD++ + LK+++ + + K ++T A + + Y
Sbjct: 121 IDLEQAAIEAADNQTVIPSALKKVKDHYRKDGK-----NFMITMAPEFPYLTSSGKYAPY 175
Query: 551 VPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAP 610
+ + Y DFIN Y+ G N + + +K+ + + V
Sbjct: 176 INNLDSYYDFINPQYYNQGGDGFWDSDLNMWIS---QSNDEKKEDFLYGLTQRLV----- 227
Query: 611 KEKLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTT 670
T F + +KF IG P++ Y + + + LK
Sbjct: 228 ---------TGTDGFIKIPASKFVIGLPSNNDAAATGYVKDPN--AVKNALNRLKA---- 272
Query: 671 LVWDNEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
+ G+M WSV+ D
Sbjct: 273 ----------------------------------SGNEIKGLMTWSVNWDA 289
Score = 80.8 bits (199), Expect = 1e-16
Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 28/205 (13%)
Query: 738 QFVYESIEFLREHKFNGLDVDWEYP--RGADDRASYVNLLKELRLAFEGEAKTSGEPRLL 795
FV E I + + F+GLD+D E AD++ + LK+++ + + K +
Sbjct: 102 DFVNEIIRLVDTYGFDGLDIDLEQAAIEAADNQTVIPSALKKVKDHYRKDGK-----NFM 156
Query: 796 LTAAVPASFEAIAAGY--DVPEISKYLDFINVMTYDFHGQWERQVGHNSPLK----PLEV 849
+T A + + Y + + Y DFIN Y+ G N + +
Sbjct: 157 ITMAPEFPYLTSSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSDLNMWISQSNDEKKE 216
Query: 850 LLITTLSIPGATSYQKKLTVDL-LLTAAVPASFEAIAAGY--DVPEISKYLDFIN----- 901
+ L+ T + + +P++ +A A GY D + L+ +
Sbjct: 217 DFLYGLTQRLVTGTDGFIKIPASKFVIGLPSNNDAAATGYVKDPNAVKNALNRLKASGNE 276
Query: 902 ---VMT----YDFHGQWERQVGHNS 919
+MT +D + +N+
Sbjct: 277 IKGLMTWSVNWDAGTNSNGEKYNNT 301
Score = 47.3 bits (112), Expect = 1e-05
Identities = 12/89 (13%), Positives = 21/89 (23%), Gaps = 9/89 (10%)
Query: 95 SKYRVVCYYTNWSQ-----YRTKIGKFQPEDIEPDLCTHIIFAFGWLKKGKLSSFESNDE 149
+V Y+ NW Y+ + I +F +
Sbjct: 3 LDKVLVGYWHNWKSTGKDGYKGGSSADFNLSSTQEGYNVINVSF-MKTPEGQTLPTFKPY 61
Query: 150 TKDGKVGLYERIEQLKKANPKLKTLLAIG 178
I +L L+A+G
Sbjct: 62 N-KTDTEFRAEISKLNAEG--KSVLIALG 87
Score = 40.0 bits (93), Expect = 0.003
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 870 DLLLTAAVPASFEAIAAGY--DVPEISKYLDFINVMTYDFHGQWERQVGHNSPLK 922
+ ++T A + + Y + + Y DFIN Y+ G N +
Sbjct: 154 NFMITMAPEFPYLTSSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSDLNMWIS 208
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT
barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB:
3a4w_A* 3a4x_A* 3afb_A
Length = 311
Score = 89.0 bits (220), Expect = 2e-19
Identities = 41/237 (17%), Positives = 69/237 (29%), Gaps = 19/237 (8%)
Query: 407 THVIYAFGTLKDHKLTLNEDKEKDEAGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKE 466
+ AF + + +LRE ++++A GG G
Sbjct: 36 KYFTLAFILYSSVYNGPAWAGSIPLEKFVDEVRELREIG--GEVIIAFGGAV-GP----Y 88
Query: 467 LTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKT 526
L Q I+ + + LD D E AD A + +++ R +
Sbjct: 89 LCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAGIDADKLADALLIVQRERPWVKFSFTL 148
Query: 527 SGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLE 586
+P + L G V D +N MT D++ N+
Sbjct: 149 PSDPGIGLAGGYGIIETMAKKGVRV-------DRVNPMTMDYYWTP--SNAENAIKVAEN 199
Query: 587 GATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTYGRSFTLVDPTKFDIGAPASGGG 643
++ + + W G MIG+ FTL D + A G
Sbjct: 200 VFRQLKQIYPEKSDEEIWKMIGL---TPMIGVNDDKSVFTLEDAQQLVDWAIQHKIG 253
Score = 60.1 bits (145), Expect = 9e-10
Identities = 19/99 (19%), Positives = 32/99 (32%), Gaps = 7/99 (7%)
Query: 736 MNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLL 795
Q I+ + + LD D E AD A + +++ R + +P +
Sbjct: 96 PEQLAEWYIKVIDTYNATYLDFDIEAGIDADKLADALLIVQRERPWVKFSFTLPSDPGIG 155
Query: 796 LTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQW 834
L G V D +N MT D++
Sbjct: 156 LAGGYGIIETMAKKGVRV-------DRVNPMTMDYYWTP 187
Score = 32.0 bits (72), Expect = 0.89
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 896 YLDFINVMTYDFHGQW 911
+D +N MT D++
Sbjct: 172 RVDRVNPMTMDYYWTP 187
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus
tridentatus} SCOP: g.31.1.1
Length = 74
Score = 78.3 bits (193), Expect = 5e-18
Identities = 13/53 (24%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 930 SCEEEDGHISYHPDKADCTHYYMCEGERKHHMPCPSNLVFNPKENVCDWPENV 982
C ++ + + C +Y C CP L +N VCDWP
Sbjct: 11 PCLDD----GPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKA 59
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics,
unknown function, hydrolase, PSI-2, protein structure
initiative; 1.50A {Streptomyces coelicolor}
Length = 302
Score = 80.3 bits (198), Expect = 2e-16
Identities = 39/321 (12%), Positives = 80/321 (24%), Gaps = 80/321 (24%)
Query: 407 THVIYAF------GTLKDHKLTLNEDKEKDEAGKFEALMQLREKNPDIKILLAIGGWAFG 460
+ AF L + + K+++++GG G
Sbjct: 31 DIIAVAFADATTTPGAVTFNLDSAGLGGYTVDQFKADVRAKQAAG--KKVIISVGGEK-G 87
Query: 461 STPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAF 520
+ + F +RE+ F+G+D+D E + L+ L
Sbjct: 88 TVSVN--SSASAT--NFANSVYSVMREYGFDGVDIDLE---NGLNPTYMTQALRALS--- 137
Query: 521 EGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNS 580
P ++LT A G D + V+ ++ +G +
Sbjct: 138 -----AKAGPDMILTMAPQTIDMQSTQGGYFQTALNVKDILTVVNMQYYNSG-TMLGCDG 191
Query: 581 PLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTYGRSFTLVDPTKFDIGAPAS 640
+ + + A ++ G ++ +G+P + +
Sbjct: 192 KV------YAQGTVDFLTALACIQLEGGLAPSQVGLGLP----------------ASTRA 229
Query: 641 GGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWDNEQQVPFAYKDDQWVGFDDERSLKMK 700
GG G++S V + +
Sbjct: 230 AGG---------GYVSPSVV------------------------NAALDCLTKATNCGSF 256
Query: 701 MDWLKEDGYGGIMIWSVDMDD 721
G M WS + D
Sbjct: 257 KPSKTYPDLRGAMTWSTNWDA 277
Score = 47.9 bits (114), Expect = 8e-06
Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
Query: 738 QFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLT 797
F +RE+ F+G+D+D E + L+ L P ++LT
Sbjct: 99 NFANSVYSVMREYGFDGVDIDLE---NGLNPTYMTQALRALS--------AKAGPDMILT 147
Query: 798 AAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPL 844
A G D + V+ ++ +G + +
Sbjct: 148 MAPQTIDMQSTQGGYFQTALNVKDILTVVNMQYYNSG-TMLGCDGKV 193
Score = 33.3 bits (76), Expect = 0.36
Identities = 17/90 (18%), Positives = 27/90 (30%), Gaps = 15/90 (16%)
Query: 95 SKYRVVCYYTNWSQYRTKIGKFQPEDIEPDLCTHIIFAF------GWLKKGKLSSFESND 148
K+ V Y+ N++ T Q P I AF L S
Sbjct: 3 LKHAVTGYWQNFNNGAT----VQKISDVPSAYDIIAVAFADATTTPGAVTFNLDSAGLGG 58
Query: 149 ETKDGKVGLYERIEQLKKANPKLKTLLAIG 178
T D + + A K ++++G
Sbjct: 59 YTVDQFK---ADVRAKQAAG--KKVIISVG 83
Score = 30.6 bits (69), Expect = 2.1
Identities = 9/62 (14%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 860 ATSYQKKLTVDLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNS 919
+ K D++LT A G D + V+ ++ +G +
Sbjct: 133 LRALSAKAGPDMILTMAPQTIDMQSTQGGYFQTALNVKDILTVVNMQYYNSG-TMLGCDG 191
Query: 920 PL 921
+
Sbjct: 192 KV 193
Score = 30.2 bits (68), Expect = 3.3
Identities = 10/80 (12%), Positives = 19/80 (23%), Gaps = 15/80 (18%)
Query: 268 GAGYVWDDEMKVPYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMDDFTGTVC 327
G GYV + + GAM W+ + D G
Sbjct: 231 GGGYVSPSVVN-------AALDCLTKATNCGSFKPSKTYPDLRGAMTWSTNWDATAG--- 280
Query: 328 GGDVKYPLIGAMREELNGIP 347
++ ++ +
Sbjct: 281 -----NAWSNSVGAHVHALE 295
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural
genomics, joint center for structural genomics, JCSG;
1.55A {Bacteroides thetaiotaomicron}
Length = 451
Score = 81.5 bits (200), Expect = 3e-16
Identities = 40/310 (12%), Positives = 85/310 (27%), Gaps = 32/310 (10%)
Query: 310 GGAMVWTVDMDDFTGTVCGGDVKYPLIGAMREELNGIPRANNAKDVDWAKVAGNVEVETV 369
V+M G D Y + A+ ++ + I + + ++
Sbjct: 102 ANTKSAEVEMTIRAGEGLQEDKTYAIPVAISDQSSDITIKDEDAKHCI-YLVKDMRNAGD 160
Query: 370 TKPAPIKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKD---HKLTLNED 426
+ + + F EN V++A D + + +
Sbjct: 161 AYKGEGVMQGYLFFEVNDVNPLNTLSFQLENGKLLWDVVVLFAANINYDAEAGRPRVQCN 220
Query: 427 KEKDEAGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLR 486
+ + +K+LL + G + +L+ F E ++ +
Sbjct: 221 PNVQYLLDNNETLLQPLRRRGVKVLLGLLGNHDITG-LAQLSEQ--GAKDFAREVAQYCK 277
Query: 487 EHKFNGLDVDWEYPRGAD---------DRASYVNLLKELRLAFEGEAKTSGEPRLLLTAA 537
+ +G++ D EY D A+ L E + A P L+T
Sbjct: 278 AYNLDGVNYDDEYSNSPDLSNPSLTNPSTAAAARLCYETKQAM---------PDKLVTVF 328
Query: 538 VPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTV 597
+A D + +++D + ++ K S + L
Sbjct: 329 DWGQMYGVAT-VDGVDAKEWIDI---VVANYGSAAYPIGQM--TKKQC-SGISMEFNLGG 381
Query: 598 EYSAKEWVKQ 607
S Q
Sbjct: 382 GGSLSASKAQ 391
Score = 64.2 bits (155), Expect = 9e-11
Identities = 17/115 (14%), Positives = 35/115 (30%), Gaps = 22/115 (19%)
Query: 737 NQFVYESIEFLREHKFNGLDVDWEYPRGAD---------DRASYVNLLKELRLAFEGEAK 787
F E ++ + + +G++ D EY D A+ L E + A
Sbjct: 266 KDFAREVAQYCKAYNLDGVNYDDEYSNSPDLSNPSLTNPSTAAAARLCYETKQAM----- 320
Query: 788 TSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNS 842
P L+T +A D + +++D + ++
Sbjct: 321 ----PDKLVTVFDWGQMYGVAT-VDGVDAKEWIDI---VVANYGSAAYPIGQMTK 367
Score = 30.7 bits (68), Expect = 2.4
Identities = 6/50 (12%), Positives = 15/50 (30%), Gaps = 4/50 (8%)
Query: 870 DLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNS 919
D L+T +A D + +++D + ++
Sbjct: 322 DKLVTVFDWGQMYGVAT-VDGVDAKEWIDI---VVANYGSAAYPIGQMTK 367
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 68.5 bits (167), Expect = 1e-11
Identities = 94/608 (15%), Positives = 166/608 (27%), Gaps = 218/608 (35%)
Query: 468 TGNVFRMNQFVYESIEFLREHKFNG-LDVDWEYPRGADDRASYVNLLKELRLAF---EGE 523
T + F +Q L+E +FN L E D+ + L+ + L + E
Sbjct: 24 TASFFIASQ--------LQE-QFNKILPEPTEGFAADDEPTTPAELVGKF-LGYVSSLVE 73
Query: 524 AKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHN--SP 581
G+ +L + FE + YL+ ++ H +
Sbjct: 74 PSKVGQFDQVLNLCL-TEFE-----------NCYLEGNDI--------------HALAAK 107
Query: 582 LKPLEGATSYQKKLTVE--YSAKEWVKQGAPKE---KLMIGMPTYGRS--FTLVDPTKFD 634
L T + K ++ +A+ K+ K+ L + G + + F
Sbjct: 108 LLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGE-GNAQLVAI-----F- 160
Query: 635 IGAPASGG-GEPGKYTAEAGFMSYYE-----VCDFLKKDNTTL--VWDNEQQVPFAYKDD 686
GG G Y E Y+ V D +K TL + +
Sbjct: 161 ------GGQGNTDDYFEE--LRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQ- 211
Query: 687 QWVGFDDERSLKMKMDWLKEDGYGGIMIWSV-DMDDL-----STPFKELTGNVFRMNQFV 740
G + ++WL+ + D D L S P + Q
Sbjct: 212 ---GLN-------ILEWLENPS-------NTPDKDYLLSIPISCPLIGVI-------QLA 247
Query: 741 -YESIEFLREHKFNGLDVDWEYPRG----------------ADDRAS-YVNLLKELRLAF 782
Y + + F ++ Y +G D S +V++ K + + F
Sbjct: 248 HY--VVTAKLLGFTPGEL-RSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLF 304
Query: 783 E-GEAKTSGEPRLLLTAAVPASFEAIAAGYDVP------------EISKYLDFINVMTYD 829
G P L ++ +++ VP ++ Y++ N
Sbjct: 305 FIGVRCYEAYPNTSLPPSILE--DSLENNEGVPSPMLSISNLTQEQVQDYVNKTNS---- 358
Query: 830 FHGQWERQVG---HNSPLK-----PLEVL--LITTL------------SIPGATSYQKKL 867
H +QV N P + L L TL IP + ++KL
Sbjct: 359 -HLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFS---ERKL 414
Query: 868 TVDLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSP-LKPLEA 926
F +A+ P FH S L P
Sbjct: 415 KFSN--------RFLPVAS----P---------------FH----------SHLLVPASD 437
Query: 927 NVVSCEEEDGHISYHPDKADCTHYYMCEGE--RKHHMPCPSNLV----FNPKENVCDWPE 980
+ + ++S++ Y +G R +V P W
Sbjct: 438 LINK-DLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLP----VKWET 492
Query: 981 NVETCLHH 988
+ H
Sbjct: 493 TTQFKATH 500
Score = 65.5 bits (159), Expect = 8e-11
Identities = 86/506 (16%), Positives = 143/506 (28%), Gaps = 190/506 (37%)
Query: 419 HKL--TLNEDKEKDEAGK-------FEALMQLREKNP--------------DIKILLAIG 455
H L L ++ + A + + + +++ G
Sbjct: 102 HALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFG 161
Query: 456 GWAFGST--PFKEL-----TGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGAD---- 504
G G+T F+EL T +V + + S E L E LD + + +G +
Sbjct: 162 G--QGNTDDYFEELRDLYQTYHVL-VGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 505 --------DR------------------ASYVNLLK-------ELRLAFEGEAKTSGEPR 531
D+ A YV K ELR +G +G +
Sbjct: 219 LENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKG---ATGHSQ 275
Query: 532 LLLTAAVPA------SFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNS-PLKP 584
L+TA A SF + L FI V + S P
Sbjct: 276 GLVTAVAIAETDSWESFFVSVR-----KAITVLFFIGV-----RCY--EAYPNTSLPPSI 323
Query: 585 L-------EGATSYQKKLTVEYSAKEWVKQGAPKEKL--MIG-----MPTYGR-SFTLVD 629
L EG S L++ +E++ + +P + +LV+
Sbjct: 324 LEDSLENNEGVPSPM--LSI---------SNLTQEQVQDYVNKTNSHLPAGKQVEISLVN 372
Query: 630 -PTKFDI-GAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWDNEQ-QVPFAYKDD 686
+ G P S Y + L+K +Q ++PF
Sbjct: 373 GAKNLVVSGPPQ----------------SLYGLNLTLRKAKAPS--GLDQSRIPF----- 409
Query: 687 QWVGFDDERSLKMKM------------------DWLKEDGYGGIMIWSVDMDDLSTP-FK 727
ER LK D + +D + ++ D+ P +
Sbjct: 410 ------SERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNA--KDIQIPVYD 461
Query: 728 ELTGNVFR-MNQFVYESI--EFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEG 784
G+ R ++ + E I +R V WE +A+++ L F G
Sbjct: 462 TFDGSDLRVLSGSISERIVDCIIRLP------VKWE--TTTQFKATHI-------LDF-G 505
Query: 785 EAKTSGEPRLLLTAAVPASFEAIAAG 810
SG L I AG
Sbjct: 506 PGGASGLGVLTHRNKDGTGVRVIVAG 531
Score = 53.5 bits (128), Expect = 3e-07
Identities = 51/303 (16%), Positives = 88/303 (29%), Gaps = 103/303 (33%)
Query: 724 TPFKEL-----TGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLKEL 778
F+EL T +V + + S E L E LD + + +G + +L+ L
Sbjct: 168 DYFEELRDLYQTYHVL-VGDLIKFSAETLSELIRTTLDAEKVFTQGLN-------ILEWL 219
Query: 779 RLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQV 838
E + T + L ++P S I V +++ Y+ ++ + G+
Sbjct: 220 ----ENPSNTPDKDYL---LSIPISCPLIG----VIQLAHYVVTAKLLGFT-PGE----- 262
Query: 839 GHNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPA------SFEAIAAGYDVPE 892
L + L GAT + + L+TA A SF
Sbjct: 263 ------------LRSYLK--GATGHSQG-----LVTAVAIAETDSWESFFVSVR------ 297
Query: 893 ISKYLDFINVMTYDFH-GQWERQVGHNSPLKPLEANVVSCEEEDGHISYHPDKADCTHYY 951
+T F G P L +++ E+ P
Sbjct: 298 --------KAITVLFFIG-VRCY--EAYPNTSLPPSILEDSLENNEGVPSP--------- 337
Query: 952 M--CEGERK-----------HHMPCPSNL---VFN-PKENVCDWP----ENVETCLHHTQ 990
M + H+P + + N K V P + L +
Sbjct: 338 MLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAK 397
Query: 991 APP 993
AP
Sbjct: 398 APS 400
Score = 44.7 bits (105), Expect = 2e-04
Identities = 66/348 (18%), Positives = 105/348 (30%), Gaps = 136/348 (39%)
Query: 439 MQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYE-----SIEF-------LR 486
M L + + + + W FK+ G F + V +I F +R
Sbjct: 1633 MDLYKTSKAAQDV-----WNRADNHFKDTYG--FSILDIVINNPVNLTIHFGGEKGKRIR 1685
Query: 487 EHKFNGLDVDWEYPRGADDRASYVNLLKEL-----RLAFEGEA----KTSGE---PRLLL 534
E N + +E D + + KE+ F E T + P L L
Sbjct: 1686 E---NYSAMIFETI--VDGKLKTEKIFKEINEHSTSYTFRSEKGLLSAT--QFTQPALTL 1738
Query: 535 TAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKK 594
A+FE + + +P + + GH S L G
Sbjct: 1739 MEK--AAFEDLKSKGLIPADATF------------------AGH-S----L-G------- 1765
Query: 595 LTVEYSA----------KEWVK---------QGAPKEKLMIGMPTYGRSFTLVDPTKFDI 635
EY+A + V+ Q A + +G YG ++P
Sbjct: 1766 ---EYAALASLADVMSIESLVEVVFYRGMTMQVAV-PRDELGRSNYG--MIAINP----- 1814
Query: 636 GAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVW---DNE--QQVPFAYKDDQWV- 689
G A+ + EA V + + K LV N QQ V
Sbjct: 1815 GRVAASFSQ------EA----LQYVVERVGKRTGWLVEIVNYNVENQQY---------VA 1855
Query: 690 -GFDDERSLKMKMDWLKEDGYGGIMIWSVDMDDL--STPFKELTGNVF 734
G D R+L + L I D+ +L S +E+ G++F
Sbjct: 1856 AG--DLRALDTVTNVLNFIKLQKI-----DIIELQKSLSLEEVEGHLF 1896
Score = 35.8 bits (82), Expect = 0.082
Identities = 42/279 (15%), Positives = 77/279 (27%), Gaps = 86/279 (30%)
Query: 144 FESNDETKDGKVGLYERIEQLKKANPKLKTLLAIGKLSLEELNGIPRANNAKDVDWAKVA 203
+ D G I + NP T+ G+ I R N + + V
Sbjct: 1646 WNRADNHFKDTYGF--SILDIVINNPVNLTIHFGGEKGKR----I-RENYSAMIFETIVD 1698
Query: 204 GNVEVETVTKPAPIKID--IF------CYMTSWSQARPGA------------GKFGPENI 243
G ++ E + K F T ++Q P A G
Sbjct: 1699 GKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQ--P-ALTLMEKAAFEDLKSKGLIPA 1755
Query: 244 DPKLCTHVI--Y-ALSTPRRVCEMLRNGAGYV-WDDEMKVPYLVH--G---DQWVGFDDE 294
D H + Y AL A + + ++ +V G V D+
Sbjct: 1756 DATFAGHSLGEYAAL-----ASL-----ADVMSIESLVE---VVFYRGMTMQVAVPRDEL 1802
Query: 295 KSIRYKMNWLKDNGYGGAMVWTVDMDDF----------TG--------------TVCGGD 330
Y M + G + + + TG V GD
Sbjct: 1803 GRSNYGMIAINP----GRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGD 1858
Query: 331 VKYPLIGAMREELNGIPRANNAKDVDWAKVAGNVEVETV 369
++ A+ + + + + +D ++ ++ +E V
Sbjct: 1859 LR-----AL-DTVTNVLNFIKLQKIDIIELQKSLSLEEV 1891
Score = 33.5 bits (76), Expect = 0.47
Identities = 35/188 (18%), Positives = 53/188 (28%), Gaps = 77/188 (40%)
Query: 29 GDQDVSASINRFKLKNRTAASSANSAVIA-------------------AGSSKSSVKASK 69
+ V S L N A + V++ +G +S + S+
Sbjct: 362 AGKQVEIS-----LVN-----GAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSE 411
Query: 70 DDPKYKVSLLVVRS-------SKSSVKANKDDSKYRVVCYYTNWSQ-------YRTKIGK 115
K+ L V S +S NKD K V +++ Y T G
Sbjct: 412 RKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNV-----SFNAKDIQIPVYDTFDGS 466
Query: 116 -FQ--PEDIEPDLC------------------THIIFAFGWLKKGKLSSFES-NDETKDG 153
+ I + THI+ FG G S KDG
Sbjct: 467 DLRVLSGSISERIVDCIIRLPVKWETTTQFKATHIL-DFG---PGGASGLGVLTHRNKDG 522
Query: 154 KVGLYERI 161
G+ R+
Sbjct: 523 T-GV--RV 527
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 49.1 bits (116), Expect = 7e-06
Identities = 89/607 (14%), Positives = 165/607 (27%), Gaps = 195/607 (32%)
Query: 404 KLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEALMQLREKNPDIKILLAIGGWAF---G 460
+ + AF + + +D K K E + K+ L W
Sbjct: 20 DILSVFEDAF--VDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF--WTLLSKQ 75
Query: 461 STPFKELTGNVFRMN-QFVYESI--------------EFLREHKFNGLDVDWEYPRGADD 505
++ V R+N +F+ I R+ +N V + +
Sbjct: 76 EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV---FAKYNVS 132
Query: 506 RASYV----NLLKELR----LAFEGEA---KTSGEPRLLLTAAVPASFEA---------- 544
R L ELR + +G KT + V S++
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW------VALDVCLSYKVQCKMDFKIFW 186
Query: 545 IAAGYDVPEISKYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEW 604
+ L+ + + Y W + H+S +K L + S +
Sbjct: 187 LNLKN-CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK-----------LRIH-SIQAE 233
Query: 605 VKQGAPKEKLMIGMPTYGRSFTLV-----DPT---KFDIGAPASGGGEPGKY---TAEAG 653
++ +L+ P Y LV + F++ K T
Sbjct: 234 LR------RLLKSKP-YENCL-LVLLNVQNAKAWNAFNLSC---------KILLTTRFKQ 276
Query: 654 FMSYYEVCDFLKKDNTTLVWDNEQQVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIM 713
V DFL TT + D + + + + +L
Sbjct: 277 ------VTDFLSAATTTHI----------SLDHHSMTLTPDEVKSLLLKYL--------- 311
Query: 714 IWSVDMDDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVN 773
DL P + LT N R++ E +R+ W+ + +VN
Sbjct: 312 --DCRPQDL--PREVLTTNPRRLSIIA----ESIRDGL-----ATWDNWK-------HVN 351
Query: 774 LLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQ 833
K LT + +S + + E K D ++V
Sbjct: 352 CDK-------------------LTTIIESSLNVL----EPAEYRKMFDRLSVFPPS---- 384
Query: 834 WERQVGHNSPLKPLEVL---LITTLSIPGATSYQKKLTVDLLLTAAVPASFEAIAAGYDV 890
+ P L ++ +I + + K L+ ++ +
Sbjct: 385 ----A--HIPTILLSLIWFDVIKSDVMVVVNKLHKYS---LVEKQPKEST-------ISI 428
Query: 891 PEISKYLDFINVMT--YDFHGQWERQVGHNSPLKPLEANVVSCEEEDG----HISYHPDK 944
P I YL+ + Y H V H + K +++ + D HI +H
Sbjct: 429 PSI--YLELKVKLENEYALH---RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN 483
Query: 945 ADCTHYY 951
+
Sbjct: 484 IEHPERM 490
Score = 41.4 bits (96), Expect = 0.002
Identities = 104/730 (14%), Positives = 208/730 (28%), Gaps = 219/730 (30%)
Query: 108 QYRTKIGKFQPEDIEPDL-CTHIIFAFGWLKKGKLSSFESNDETKDGKVGLYERIEQLKK 166
QY+ + F+ + C + + K LS E + I +
Sbjct: 17 QYKDILSVFED-AFVDNFDCKDVQD----MPKSILSKEE------------IDHI--IMS 57
Query: 167 ANPKLKTLLAIGKLSLEELNGIPRANN---AKDVDWAKVAGNVEVETVTKPAPIKIDIFC 223
+ TL L ++ + + + + + ++ E ++ I
Sbjct: 58 KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF--LMSPIKTEQRQPSMMTRMYIEQ 115
Query: 224 YMTSWSQARPGAGKFGPENID-PKLCTHVIYALSTPRR-----VCEMLRNGAGYVW---- 273
++ + F N+ + + AL R + +L G+G W
Sbjct: 116 RDRLYNDNQV----FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL--GSGKTWVALD 169
Query: 274 ---DDEMKV--PYLVHGDQWVGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMDDFTGTVCG 328
+++ + + W+ + S + L+ Y WT D
Sbjct: 170 VCLSYKVQCKMDFKIF---WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD-------- 218
Query: 329 GDVKYPL-IGAMREELNGI---PRANNA----KDVDWAKVAGNVEVETVTKPAPIKIDIF 380
L I +++ EL + N +V N + + F
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV-Q-----NAKA----------WNAF 262
Query: 381 ---C--YMTSWSQARPGAGKFGPENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKF 435
C +T+ R K + + TH+ +L H +TL D+ K K+
Sbjct: 263 NLSCKILLTT----R---FKQVTDFLSAATTTHI-----SLDHHSMTLTPDEVKSLLLKY 310
Query: 436 EALMQLREKNPDIKILLAIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDV 495
L + D+ P + LT N R++ E +R+
Sbjct: 311 -----LDCRPQDL--------------PREVLTTNPRRLSIIA----ESIRDGL-----A 342
Query: 496 DWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEIS 555
W+ + +VN K LT + +S + + E
Sbjct: 343 TWDNWK-------HVNCDK-------------------LTTIIESSLNVL----EPAEYR 372
Query: 556 KYLDFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGA----PK 611
K D ++V + P L K V + K PK
Sbjct: 373 KMFDRLSVFPPS--------A--HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 612 EKLMIGMPTYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTL 671
E + ++ ++ +Y + +Y + D+ L
Sbjct: 423 E----------STISIPS-IYLELKVKL-----ENEYALHRSIVDHYNIPK--TFDSDDL 464
Query: 672 VWDNEQQVPFAY---------KDDQWVGFD----DERSLKMKMDWLKEDGYGGIMIWSV- 717
+ Q +++ ++ F D R L+ K ++ D S+
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK---IRHDSTAWNASGSIL 521
Query: 718 -DMDDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNLLK 776
+ L + N + + V ++FL + + N + + Y +LL
Sbjct: 522 NTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLI------------CSKYTDLL- 568
Query: 777 ELRLAFEGEA 786
+ L E EA
Sbjct: 569 RIALMAEDEA 578
Score = 36.8 bits (84), Expect = 0.050
Identities = 55/379 (14%), Positives = 109/379 (28%), Gaps = 111/379 (29%)
Query: 71 DPKYKVSLLVVR--SSKSSVKA------------NKDDSKYRVVCYYTNWSQYRTKIGKF 116
Y+ LLV+ + + A K + + T+ S +
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT-L 298
Query: 117 QPEDIEPDLCTHIIFA-FGWLKKGKLSSFESND-----------ETKDGKVGLYERIEQL 164
P++++ + + + L E +DG +
Sbjct: 299 TPDEVKS------LLLKYLDCRPQDLPR-EVLTTNPRRLSIIAESIRDGL----ATWDNW 347
Query: 165 KKAN-PKLKTLLAIGKLSLEELN-----------GI-PRANNAKDVD---------WAKV 202
K N KL T++ + SL L + P W V
Sbjct: 348 KHVNCDKLTTII---ESSLNVLEPAEYRKMFDRLSVFP-----PSAHIPTILLSLIWFDV 399
Query: 203 AGNVEVETVTKPAPIKIDIFCYMTSWSQARPGAGKFGPENIDPKLCTHVIYALSTPRRVC 262
+ + V K + S + +P +I +L + + R +
Sbjct: 400 IKSDVMVVVNK---------LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIV 450
Query: 263 EMLRNGAGYVWDDEMKVP-------YLVH-------GDQWVGFDD--------EKSIRY- 299
+ + DD + ++ H ++ F E+ IR+
Sbjct: 451 DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHD 510
Query: 300 KMNWLKDNGYGGAMVWTVDMDDFTGTVCGGDVKYP-LIGAMREELNGIPRAN----NAKD 354
W N G + + + +C D KY L+ A+ L+ +P+ +K
Sbjct: 511 STAW---NASGSILNTLQQLKFYKPYICDNDPKYERLVNAI---LDFLPKIEENLICSKY 564
Query: 355 VDWAKVAGNVEVETVTKPA 373
D ++A E E + + A
Sbjct: 565 TDLLRIALMAEDEAIFEEA 583
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A
{Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A*
Length = 310
Score = 42.9 bits (100), Expect = 3e-04
Identities = 29/182 (15%), Positives = 49/182 (26%), Gaps = 30/182 (16%)
Query: 448 IKILLAIGGWAFGS---------TPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWE 498
K+LL+IGG F F +E + +G D D E
Sbjct: 88 KKVLLSIGGAYPPDQSILSEDSAVAFATFLWGAFGPVAEGWEGPRPFGDVVVDGFDFDIE 147
Query: 499 YPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYL 558
+ G Y ++ R F E + L+AA + +
Sbjct: 148 HNGG----FGYATMVNTFRQYF----NQVPERKFYLSAAPQCIIPDAQLSDAI--FNAAF 197
Query: 559 DFINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGM 618
DFI + Y+ + + + + KL +G+
Sbjct: 198 DFIWIQYYN-----------TAACSAKSFIDTSLGTFNFDAWVTVLKASASKDAKLYVGL 246
Query: 619 PT 620
P
Sbjct: 247 PA 248
Score = 32.1 bits (72), Expect = 0.94
Identities = 33/177 (18%), Positives = 52/177 (29%), Gaps = 18/177 (10%)
Query: 715 WSVDMDDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNL 774
S+ +D + F F +E + +G D D E+ G Y +
Sbjct: 102 QSILSEDSAVAFATFLWGAFGPVAEGWEGPRPFGDVVVDGFDFDIEHNGG----FGYATM 157
Query: 775 LKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINVMTYDFHGQW 834
+ R F E + L+AA + + DFI + Y+
Sbjct: 158 VNTFRQYF----NQVPERKFYLSAAPQCIIPDAQLSDAI--FNAAFDFIWIQYYNTAACS 211
Query: 835 ERQVGHNSPLKPLEVLLITTLSIPGATSYQKKLTVDLLLTAAVPASFEAIAAGYDVP 891
+ S + + S KL V L PAS A GY +
Sbjct: 212 AKSFIDTSLGT--FNFDAWVTVLKASASKDAKLYVGL------PASETAANQGYYLT 260
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED
protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5
Length = 299
Score = 40.1 bits (93), Expect = 0.002
Identities = 43/283 (15%), Positives = 73/283 (25%), Gaps = 97/283 (34%)
Query: 448 IKILLAIGGWA----FGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGA 503
+K+ LA+GG S + + L + +G+ D + P
Sbjct: 77 VKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREGPLGKVALDGIHFDIQKPVDE 136
Query: 504 DDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINV 563
++ NLL+EL + K + LL+AA + +++ D+I V
Sbjct: 137 ---LNWDNLLEELY-----QIKDVYQSTFLLSAAPGCLSPDEYLDNAIQ--TRHFDYIFV 186
Query: 564 MTY-DFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTYG 622
Y D Q+ + W K P+
Sbjct: 187 RFYNDRSCQYSTGNIQRI-----------------RNAWLSWTKSVYPR----------- 218
Query: 623 RSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMS----YYEVCDFLKKDNTTLVWDNEQQ 678
+ PAS PG G++ +V +L T
Sbjct: 219 -------DKNLFLELPASQATAPG-----GGYIPPSALIGQVLPYLPDLQTR-------- 258
Query: 679 VPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
Y GI +W+ D
Sbjct: 259 ------------------------------YAGIALWNRQADK 271
Score = 29.3 bits (65), Expect = 5.5
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 747 LREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEA 806
L + +G+ D + P ++ NLL+EL + K + LL+AA
Sbjct: 118 LGKVALDGIHFDIQKPVDE---LNWDNLLEELY-----QIKDVYQSTFLLSAAPGCLSPD 169
Query: 807 IAAGYDVPEISKYLDFINVMTYD 829
+ +++ D+I V Y+
Sbjct: 170 EYLDNAIQ--TRHFDYIFVRFYN 190
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I),
beta alpha barrel (xylanase), HYD inhibitor-hydrolase
complex; HET: NAG; 1.70A {Triticum aestivum} SCOP:
c.1.8.5 PDB: 1om0_A* 1te1_A*
Length = 274
Score = 38.8 bits (90), Expect = 0.006
Identities = 44/282 (15%), Positives = 72/282 (25%), Gaps = 98/282 (34%)
Query: 448 IKILLAIGGWAFGST--------PFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEY 499
+ + L+IGG+ G + + N + + +G+D+ E+
Sbjct: 71 VPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSY-FGGSKPSVPRPFGDAWLDGVDLFLEH 129
Query: 500 PRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLD 559
AD Y L EL + L LTA V + AA + +
Sbjct: 130 GTPAD---RYDVLALELAKHN---IRGGPGKPLHLTATVRCGYPP-AAHVGRALATGIFE 182
Query: 560 FINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMP 619
++V TY+ + +G E S +W P + +G+
Sbjct: 183 RVHVRTYESDKWCNQNLGW-------------------EGSWDKWTA-AYPATRFYVGLT 222
Query: 620 TYGRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMSYYEVCDFLKKDNTTLVWDNEQQV 679
S K YY V +K +
Sbjct: 223 A----------------DDKSHQWVHPKNV-------YYGVAPVAQKKDN---------- 249
Query: 680 PFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
YGGIM+W D
Sbjct: 250 -----------------------------YGGIMLWDRYFDK 262
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation,
glycopr chitin-binding, chitin degradation, CAZY,
hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A*
2uy4_A* 2uy5_A*
Length = 294
Score = 38.1 bits (88), Expect = 0.011
Identities = 37/284 (13%), Positives = 68/284 (23%), Gaps = 103/284 (36%)
Query: 448 IKILLAIGGWAFGSTPFKELTGNVF------RMNQFVYESIEFLREHKFNGLDVDWEYPR 501
K+LL++GG + + F + S +G D D E
Sbjct: 80 KKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPFDSAVVDGFDFDIENNN 139
Query: 502 GADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFI 561
Y L +LR G + L+AA + + G + +DF
Sbjct: 140 EVG----YSALATKLR-----TLFAEGTKQYYLSAAPQCPYPDASVGDLLENA--DIDFA 188
Query: 562 NVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTY 621
+ Y+ + Q ++ TY
Sbjct: 189 FIQFYNNYCSVSGQFNWDT-------------------------------------WLTY 211
Query: 622 GRSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMS----YYEVCDFLKKDNTTLVWDNEQ 677
++ + K +G P S A +G++S + ++
Sbjct: 212 AQTVSPNKNIKLFLGLPGSASA------AGSGYISDTSLLESTIADIASSSS-------- 257
Query: 678 QVPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
+GGI +W
Sbjct: 258 -------------------------------FGGIALWDASQAF 270
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase;
1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5
PDB: 1eom_A*
Length = 290
Score = 36.8 bits (84), Expect = 0.029
Identities = 33/254 (12%), Positives = 62/254 (24%), Gaps = 41/254 (16%)
Query: 398 PENIDPKLCTHVIYAFGTLKDHKLTLNEDKEKDEAGKFEALMQLREKNP-----DIKILL 452
P+ +D VI + T G F++ L + IK+L
Sbjct: 30 PDKVD-----MVILFGLKYWSLQDTTKLPGGTGMMGSFKSYKDLDTQIRSLQSRGIKVLQ 84
Query: 453 AIGGWAFGSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNL 512
I + + + + + + K +G+ +D E+ +
Sbjct: 85 NIDDDVSWQSSKPGGFASAAAYGDAIKSIV--IDKWKLDGISLDIEHSGAKPNPIPTFPG 142
Query: 513 LKELRLAFEGEAKTSGEPRLLLT----------AAVPASFEAIAAGYD-------VPEIS 555
+ P L A IA+G D +
Sbjct: 143 YAATGYNGWYSGSMAATPAFLNVISELTKYFGTTAPNNKQLQIASGIDVYAWNKIMENFR 202
Query: 556 KYLDFINVMTY-------DFHGQWERQVGHNSPLKPLEGA-TSYQKKLTVEYSAKEWVKQ 607
++I + +Y + K + GA + +W
Sbjct: 203 NNFNYIQLQSYGANVSRTQLMMNYATGTNKIPASKMVFGAYAEGGTNQANDVEVAKWTPT 262
Query: 608 GAPKEKLMIGMPTY 621
K GM Y
Sbjct: 263 QGAKG----GMMIY 272
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.0 bits (74), Expect = 0.24
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 428 EKDEAGKFEALMQLREKNPDIKILLAI 454
EK K +A ++L D LAI
Sbjct: 18 EKQALKKLQASLKLYA--DDSAPALAI 42
Score = 30.3 bits (67), Expect = 1.9
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 9/32 (28%)
Query: 159 ERIEQLKKANPKLKTL-------LAIGKLSLE 183
E+ + LKK LK LAI K ++E
Sbjct: 18 EK-QALKKLQASLKLYADDSAPALAI-KATME 47
Score = 29.1 bits (64), Expect = 3.8
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 14/34 (41%)
Query: 912 ERQVGHNSPLKPLEANVVSCEEEDGHISYHPDKA 945
E+Q LK L+A++ Y D A
Sbjct: 18 EKQ-----ALKKLQASLKL---------YADDSA 37
Score = 28.8 bits (63), Expect = 5.3
Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 2/21 (9%)
Query: 865 KKLTVDLLLTAAVPASFEAIA 885
KKL L L A S A+A
Sbjct: 23 KKLQASLKLYA--DDSAPALA 41
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell,
amylase/xylanase inhibitory protein, hydrolase I; 1.29A
{Scadoxus multiflorus} PDB: 3o9n_A 3oih_A* 3hu7_A
3m7s_A* 3d5h_A*
Length = 273
Score = 33.5 bits (76), Expect = 0.31
Identities = 32/181 (17%), Positives = 49/181 (27%), Gaps = 37/181 (20%)
Query: 448 IKILLAIGGWA----FGSTP----FKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEY 499
+K+LL+IGG A S F + +G+D E+
Sbjct: 68 VKVLLSIGGPAGPYSLDSRNDANDLAVYLHKNFLLPPAGTSESRPFGNAVLDGIDFHIEH 127
Query: 500 PRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLD 559
+ Y L L LTAA + G + D
Sbjct: 128 GGP----SQYQLLANILSSFR------LSGSEFALTAAPQCVYPDPNLGTVINSA--TFD 175
Query: 560 FINVMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMP 619
I V Y+ + S + + KEW A +K+ +G P
Sbjct: 176 AIWVQFYNNPQ----------------CSYSASNASALMNAWKEWSM-KARTDKVFLGFP 218
Query: 620 T 620
Sbjct: 219 A 219
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis}
SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A*
1kqy_A* 1kqz_A*
Length = 273
Score = 33.2 bits (75), Expect = 0.37
Identities = 38/283 (13%), Positives = 73/283 (25%), Gaps = 102/283 (36%)
Query: 448 IKILLAIGGWAFG-----STPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRG 502
IK++L++GG K + ++ S L + +G+D D E+
Sbjct: 72 IKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGST 131
Query: 503 ADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFIN 562
+ +L + L +K + L P + + + D++
Sbjct: 132 ----LYWDDLARYLSAY----SKQGKKVYLTAAPQCPFPDRYLGTALN----TGLFDYVW 179
Query: 563 VMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTYG 622
V Y+ Q + + S W K+ +G+P
Sbjct: 180 VQFYN---NPPCQYSSGNINNIIN-------------SWNRWTT-SINAGKIFLGLPAAP 222
Query: 623 RSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMS----YYEVCDFLKKDNTTLVWDNEQQ 678
+ A +G++ + +KK
Sbjct: 223 EA-------------------------AGSGYVPPDVLISRILPEIKKSPK--------- 248
Query: 679 VPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
YGG+M+WS DD
Sbjct: 249 ------------------------------YGGVMLWSKFYDD 261
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase,
nucleotide-binding, serine/T protein kinase,
transferase, CBS domain; HET: ADP ATP; 2.41A
{Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G*
2oox_G* 2ooy_G*
Length = 334
Score = 32.5 bits (74), Expect = 0.69
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 4/86 (4%)
Query: 289 VGFDDEKSIRYKMNWLKDNGYGGAMVWTVDMDDFTGTVCGGDVKYPLIGAMREELNGIPR 348
+ FD ++ ++ L N A +W + + F G + D + ++
Sbjct: 35 IVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMAD----FVNVIKYYYQSSSF 90
Query: 349 ANNAKDVDWAKVAGNVEVETVTKPAP 374
++D ++ G EVE P
Sbjct: 91 PEAIAEIDKFRLLGLREVERKIGAIP 116
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A
{Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A*
2hf2_A
Length = 271
Score = 31.7 bits (73), Expect = 1.1
Identities = 9/40 (22%), Positives = 18/40 (45%), Gaps = 8/40 (20%)
Query: 414 GTLKDHKLTLNEDKEKDEAGKFEALMQLREKNPDIKILLA 453
GT LN+ K ++ +L+++ IK ++A
Sbjct: 12 GTF------LNDAKTYNQPRFMAQYQELKKRG--IKFVVA 43
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A
{Streptococcus mutans}
Length = 304
Score = 31.5 bits (72), Expect = 1.3
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 8/40 (20%)
Query: 414 GTLKDHKLTLNEDKEKDEAGKFEALMQLREKNPDIKILLA 453
GT LN D L QL+E++ I+ ++A
Sbjct: 46 GTF------LNSKGSYDHNRFQRILKQLQERD--IRFVVA 77
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl
hydrolase family 18, equilibrium sedimentation, X-RAY;
1.73A {Parkia platycephala}
Length = 271
Score = 30.8 bits (69), Expect = 2.2
Identities = 45/283 (15%), Positives = 81/283 (28%), Gaps = 104/283 (36%)
Query: 448 IKILLAIGGWA----FGSTP-FKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRG 502
IK++L+IGG A S + + ++ S L + +G+D D E+
Sbjct: 72 IKVMLSIGGGAGSYSLSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLDGVDFDIEHG-- 129
Query: 503 ADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFIN 562
A Y L + L G ++ L+AA F + + + D++
Sbjct: 130 ---GAYYDALARRLSE------HNRGGKKVFLSAAPQCPFPDQSLNKALS--TGLFDYVW 178
Query: 563 VMTYDFHGQWERQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEKLMIGMPTYG 622
V Y N+P + + S +W + K +G+P
Sbjct: 179 VQFY------------NNP----QCEFNSGNPSNFRNSWNKWTS--SFNAKFYVGLPA-- 218
Query: 623 RSFTLVDPTKFDIGAPASGGGEPGKYTAEAGFMS----YYEVCDFLKKDNTTLVWDNEQQ 678
+P + G G++ +V F+K+
Sbjct: 219 --------------SPEAAGS---------GYVPPQQLINQVLPFVKRSPK--------- 246
Query: 679 VPFAYKDDQWVGFDDERSLKMKMDWLKEDGYGGIMIWSVDMDD 721
YGG+M+W D
Sbjct: 247 ------------------------------YGGVMLWDRFNDL 259
>3dao_A Putative phosphatse; structural genomics, joint center for S
genomics, JCSG, protein structure initiative, PSI-2,
hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Length = 283
Score = 30.6 bits (70), Expect = 2.4
Identities = 6/40 (15%), Positives = 14/40 (35%), Gaps = 8/40 (20%)
Query: 414 GTLKDHKLTLNEDKEKDEAGKFEALMQLREKNPDIKILLA 453
GTL + + + + +L +K I ++
Sbjct: 30 GTL------VKDGSLLIDPEYMSVIDRLIDKG--IIFVVC 61
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate
binding, plant cell WALL degradation, hydrolase,
cellulases; 1.80A {Cellvibrio japonicus}
Length = 347
Score = 30.6 bits (68), Expect = 2.6
Identities = 14/89 (15%), Positives = 26/89 (29%), Gaps = 2/89 (2%)
Query: 409 VIYAFGTLKDHKLTLNEDKEKDEAGKFEALMQLREKNPDIKILLAIGGWAFGSTPFKELT 468
+I A GT + D+ + L + +P I+L G G ++
Sbjct: 229 IISAIGT--NDFSPGIPDRATYINTYTRFVRTLLDNHPQATIVLTEGAILNGDKKAALVS 286
Query: 469 GNVFRMNQFVYESIEFLREHKFNGLDVDW 497
Q + + G + D
Sbjct: 287 YIGETRQQLHSNRVFYASSSHHPGDNSDA 315
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted,
oxazoline, NAG-thiazoline, substrate-participation;
1.40A {Streptococcus pneumoniae} PDB: 2w92_A*
Length = 653
Score = 30.2 bits (67), Expect = 4.6
Identities = 10/82 (12%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Query: 715 WSVDMDDLSTPFKELTGNVFRMNQFVYESIEFLREHKFNGLDVDWEYPRGADDRASYVNL 774
WS + D + L + + ++ + + ++G ++ E D
Sbjct: 125 WSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYGYDGYFINQETT--GDLVKPLGEK 182
Query: 775 LKELRLAFEGEAKTSGEPRLLL 796
+++ L + A P
Sbjct: 183 MRQFMLYSKEYAAKVNHPIKYS 204
>1lln_A Antiviral protein 3; ribosome inactivating protein,
polynucleotide:adenosine, hydrolase; HET: MLY; 1.60A
{Phytolacca americana} SCOP: d.165.1.1
Length = 262
Score = 29.2 bits (64), Expect = 5.5
Identities = 19/135 (14%), Positives = 37/135 (27%), Gaps = 11/135 (8%)
Query: 505 DRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPASFEAIAAGYDVPEISKYLDFINV- 563
+Y N L LR A T + T + + + + + N+
Sbjct: 10 TPETYSNFLTSLREAVXDXKLTCHGMIMATTLTEQPXYVLVDLXFGSGTFTLAIRRGNLY 69
Query: 564 -----MTYDFHGQWE-----RQVGHNSPLKPLEGATSYQKKLTVEYSAKEWVKQGAPKEK 613
Y+ ++ + + Q + E S K +G + K
Sbjct: 70 LEGYSDIYNGKCRYRIFXDSESDAQETVCPGDKSKPGTQNNIPYEXSYKGMESKGGARTK 129
Query: 614 LMIGMPTYGRSFTLV 628
L +G T +
Sbjct: 130 LGLGXITLKSRMGXI 144
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG,
structural genomics center for structural genomics; HET:
MSE TRP; 1.35A {Streptococcus pneumoniae}
Length = 295
Score = 28.8 bits (64), Expect = 9.0
Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
Query: 482 IEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPAS 541
+ L E + V ++ D++ + K+L + L++ A PA+
Sbjct: 24 QDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLV---------ANGNDLVVGIATPAA 74
Query: 542 FEAIAAGYDVP 552
+A D+P
Sbjct: 75 QGLASATKDLP 85
Score = 28.8 bits (64), Expect = 9.0
Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 9/71 (12%)
Query: 744 IEFLREHKFNGLDVDWEYPRGADDRASYVNLLKELRLAFEGEAKTSGEPRLLLTAAVPAS 803
+ L E + V ++ D++ + K+L + L++ A PA+
Sbjct: 24 QDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLV---------ANGNDLVVGIATPAA 74
Query: 804 FEAIAAGYDVP 814
+A D+P
Sbjct: 75 QGLASATKDLP 85
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.135 0.414
Gapped
Lambda K H
0.267 0.0741 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 16,068,623
Number of extensions: 1017577
Number of successful extensions: 2670
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2319
Number of HSP's successfully gapped: 239
Length of query: 996
Length of database: 6,701,793
Length adjustment: 103
Effective length of query: 893
Effective length of database: 3,825,930
Effective search space: 3416555490
Effective search space used: 3416555490
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (27.6 bits)