BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13136
(695 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17972|KCNAW_DROME Potassium voltage-gated channel protein Shaw OS=Drosophila
melanogaster GN=Shaw PE=2 SV=1
Length = 498
Score = 600 bits (1547), Expect = e-170, Method: Compositional matrix adjust.
Identities = 309/384 (80%), Positives = 336/384 (87%), Gaps = 17/384 (4%)
Query: 304 MDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFI 363
+DTEKPS+EE+ARKFGFEE Y+KG +SWWQ+ KP++WSLFDEPYSSN+AK IGVVSVFFI
Sbjct: 125 LDTEKPSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSVFFI 184
Query: 364 CISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAFFYIECLCNAWFTF 423
CISILSFCLKTHPDMRVP++ NITV+T + ++ W LDKTQTNAH AFFYIEC+CNAWFTF
Sbjct: 185 CISILSFCLKTHPDMRVPIVRNITVKTANGSNGWFLDKTQTNAHIAFFYIECVCNAWFTF 244
Query: 424 EILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENADILEFFSIIRIMR 483
EIL+RFISSP K EFIK+SVN+IDYIATLSFYIDL+LQ+FASHLENADILEFFSIIRIMR
Sbjct: 245 EILVRFISSPNKWEFIKSSVNIIDYIATLSFYIDLVLQRFASHLENADILEFFSIIRIMR 304
Query: 484 LFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPHNDFNSI 543
LFKLTRHSSGLKIL+QTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQ NPHNDFNSI
Sbjct: 305 LFKLTRHSSGLKILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQPNPHNDFNSI 364
Query: 544 PLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQ 603
PLGLWWALVTMTTVGYGDMAPKTY+GMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQ
Sbjct: 365 PLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQ 424
Query: 604 ARAKLPKKRRRVLPVEQPRGPMRLPGQ-GPPSGPGGTPVGPCGGPVGGGGGGGIPSSVSS 662
ARAKLPKKRRRVLPVEQPR P RLPG G SG G GP GP+G GG G
Sbjct: 425 ARAKLPKKRRRVLPVEQPRQP-RLPGAPGGVSGCGTPGSGPHSGPMGSGGTGP------- 476
Query: 663 GNMNRRMNPAKANNPKEMMGPKMD 686
RRMN N K+++ PK D
Sbjct: 477 ----RRMN----NKTKDLVSPKSD 492
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/164 (75%), Positives = 128/164 (78%), Gaps = 17/164 (10%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLVYYAERIQ NPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTY+GMFVGALCALAGVLT
Sbjct: 345 SLVYYAERIQPNPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYIGMFVGALCALAGVLT 404
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPMRLPGQ-GPPSGPGGTPVG 261
IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPR P RLPG G SG G G
Sbjct: 405 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRQP-RLPGAPGGVSGCGTPGSG 463
Query: 262 PCGGPVGGGGGGGIPSSVSSGNMNRRMNPAKANNPKEMMGPKMD 305
P GP+G GG G RRMN N K+++ PK D
Sbjct: 464 PHSGPMGSGGTGP-----------RRMN----NKTKDLVSPKSD 492
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 114/169 (67%), Gaps = 18/169 (10%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLHYPTDVCGPLFEEELEFWGLD+ + + + + +HRDTQETLAVLDRLDLDTEK
Sbjct: 71 TGKLHYPTDVCGPLFEEELEFWGLDSNQVE-PCCWMTYTQHRDTQETLAVLDRLDLDTEK 129
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAKDNEALQVDEAFVGLE 120
PS+EE+ARKFGFEE Y+KG +SWWQ+ KP++WSLFDEPYSSN+AK + V F+ +
Sbjct: 130 PSEEELARKFGFEEDYYKGTISWWQEMKPRIWSLFDEPYSSNAAKTIGVVSV--FFICIS 187
Query: 121 NLDANVPCICKRTDPSSVFPCVSLV----------YYAERIQANPHNDF 159
L C +T P P V + ++ ++ Q N H F
Sbjct: 188 ILS-----FCLKTHPDMRVPIVRNITVKTANGSNGWFLDKTQTNAHIAF 231
>sp|G5EFC3|KCNAG_CAEEL Potassium voltage-gated channel protein egl-36 OS=Caenorhabditis
elegans GN=egl-36 PE=1 SV=1
Length = 558
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/376 (53%), Positives = 252/376 (67%), Gaps = 17/376 (4%)
Query: 288 MNPAKANNPKEMMG--PKMDTEKPSD-----EEMARKFGFEEAYFKGRLSWWQKTKPQLW 340
M A + +E + +MD + D ++ +KFG+EE YF+G+ + W K KPQ+W
Sbjct: 132 MQLLHAKDTQETLAVLDRMDADHEDDPQLREQDTMKKFGWEEDYFQGKRTRWMKLKPQMW 191
Query: 341 SLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLD 400
SLFDEPYSS +AK+I +SV FI ISI SFCLKTH R+PV+ + +++
Sbjct: 192 SLFDEPYSSQAAKLIAGISVLFIFISIFSFCLKTHQSFRLPVLIGQNITMPGGVVQPSIE 251
Query: 401 KTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLL 460
+ T F IE LCN WFT E+++RF+ P K F K+ +N+ID +ATLSFY D ++
Sbjct: 252 RVSTEPLPIFGQIEMLCNIWFTLELIIRFVFCPSKIRFFKSPLNMIDLVATLSFYADAMM 311
Query: 461 QKFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIV 520
+ E D++EF S+IRI RLFKLT+H GL+IL+ TFRASAKEL LLVFFL+LGIV
Sbjct: 312 VRVVED-EPKDVVEFLSMIRIFRLFKLTQHHQGLQILIHTFRASAKELILLVFFLILGIV 370
Query: 521 IFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAG 580
IFA+LVYYAE+++ANP+N F SIPLGLWWA+ TMTTVGYGDM P T G VG+LCA+ G
Sbjct: 371 IFAALVYYAEKMEANPNNQFQSIPLGLWWAICTMTTVGYGDMTPHTSFGRLVGSLCAVMG 430
Query: 581 VLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPMRLPGQGPPSGPGGTP 640
VLTIALPVPVIVSNFAM+YSH QAR KLPK+RRRVLPVEQ R R
Sbjct: 431 VLTIALPVPVIVSNFAMFYSHNQARDKLPKRRRRVLPVEQIRLQAR---------RHAAV 481
Query: 641 VGPCGGPVGGGGGGGI 656
+ P G GGG I
Sbjct: 482 LEPSASQGGLGGGQAI 497
Score = 167 bits (422), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 94/133 (70%), Gaps = 9/133 (6%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
+LVYYAE+++ANP+N F SIPLGLWWA+ TMTTVGYGDM P T G VG+LCA+ GVLT
Sbjct: 374 ALVYYAEKMEANPNNQFQSIPLGLWWAICTMTTVGYGDMTPHTSFGRLVGSLCAVMGVLT 433
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPMRLPGQGPPSGPGGTPVGP 262
IALPVPVIVSNFAM+YSH QAR KLPK+RRRVLPVEQ R R + P
Sbjct: 434 IALPVPVIVSNFAMFYSHNQARDKLPKRRRRVLPVEQIRLQAR---------RHAAVLEP 484
Query: 263 CGGPVGGGGGGGI 275
G GGG I
Sbjct: 485 SASQGGLGGGQAI 497
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 4/122 (3%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTE- 59
TGKLHYPTDVCGPLFEEEL++WGLDA + + ++ +DTQETLAVLDR+D D E
Sbjct: 98 TGKLHYPTDVCGPLFEEELQYWGLDASDTE-PCCWMQLLHAKDTQETLAVLDRMDADHED 156
Query: 60 --KPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAKDNEALQVDEAFV 117
+ +++ +KFG+EE YF+G+ + W K KPQ+WSLFDEPYSS +AK + V F+
Sbjct: 157 DPQLREQDTMKKFGWEEDYFQGKRTRWMKLKPQMWSLFDEPYSSQAAKLIAGISVLFIFI 216
Query: 118 GL 119
+
Sbjct: 217 SI 218
>sp|P22462|KCNC2_RAT Potassium voltage-gated channel subfamily C member 2 OS=Rattus
norvegicus GN=Kcnc2 PE=1 SV=1
Length = 638
Score = 292 bits (747), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 155/332 (46%), Positives = 219/332 (65%), Gaps = 21/332 (6%)
Query: 302 PKMDTEKPSDEEM--ARKFGFEEAYF----KGRLSWWQKTKPQLWSLFDEPYSSNSAKII 355
P + P D+E ++ G E+A G+ W+K +P++W+LF++PYSS +A+ I
Sbjct: 172 PDLIGGDPGDDEDLGGKRLGIEDAAGLGGPDGKSGRWRKLQPRMWALFEDPYSSRAARFI 231
Query: 356 GVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAFFYIEC 415
S+FFI +SI +FCL+TH + + N T + TSA + +T+ A Y+E
Sbjct: 232 AFASLFFILVSITTFCLETHEAFNI--VKNKTEPVINGTSAVLQYEIETDP--ALTYVEG 287
Query: 416 LCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENADILEF 475
+C WFTFE L+R + SP K EFIK +N+ID++A L FY+++ L +S D+L F
Sbjct: 288 VCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAK-DVLGF 346
Query: 476 FSIIR---IMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI 532
++R I+R+FKLTRH GL++L T RAS E LL+ FL LG++IFA+++YYAER+
Sbjct: 347 LRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERV 406
Query: 533 QANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIA 585
A P H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA
Sbjct: 407 GAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIA 466
Query: 586 LPVPVIVSNFAMYYSHTQARAKLPKKRRRVLP 617
+PVPVIV+NF MYYS A+ KLP+KR++ +P
Sbjct: 467 MPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIP 498
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 79/102 (77%), Gaps = 7/102 (6%)
Query: 142 VSLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGAL 194
+++YYAER+ A P H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGAL
Sbjct: 397 ATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGAL 456
Query: 195 CALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLP 236
CALAGVLTIA+PVPVIV+NF MYYS A+ KLP+KR++ +P
Sbjct: 457 CALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIP 498
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH P DVCGPLFEEEL FWG+D + + + +HRD +E L + + DL
Sbjct: 120 TGKLHCPADVCGPLFEEELAFWGIDETDVE-PCCWMTYRQHRDAEEALDIFETPDLIGGD 178
Query: 61 PSDEE--MARKFGFEEAYF----KGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
P D+E ++ G E+A G+ W+K +P++W+LF++PYSS +A+
Sbjct: 179 PGDDEDLGGKRLGIEDAAGLGGPDGKSGRWRKLQPRMWALFEDPYSSRAAR 229
>sp|Q96PR1|KCNC2_HUMAN Potassium voltage-gated channel subfamily C member 2 OS=Homo
sapiens GN=KCNC2 PE=1 SV=1
Length = 638
Score = 292 bits (747), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 219/332 (65%), Gaps = 21/332 (6%)
Query: 302 PKMDTEKPSDEE--MARKFGFEEAYF----KGRLSWWQKTKPQLWSLFDEPYSSNSAKII 355
P + P D+E A++ G E+A G+ W++ +P++W+LF++PYSS +A+ I
Sbjct: 172 PDLIGGDPGDDEDLAAKRLGIEDAAGLGGPDGKSGRWRRLQPRMWALFEDPYSSRAARFI 231
Query: 356 GVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAFFYIEC 415
S+FFI +SI +FCL+TH + + N T + TS + +T+ A Y+E
Sbjct: 232 AFASLFFILVSITTFCLETHEAFNI--VKNKTEPVINGTSVVLQYEIETDP--ALTYVEG 287
Query: 416 LCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENADILEF 475
+C WFTFE L+R + SP K EFIK +N+ID++A L FY+++ L +S D+L F
Sbjct: 288 VCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAK-DVLGF 346
Query: 476 FSIIR---IMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI 532
++R I+R+FKLTRH GL++L T RAS E LL+ FL LG++IFA+++YYAER+
Sbjct: 347 LRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERV 406
Query: 533 QANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIA 585
A P H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA
Sbjct: 407 GAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIA 466
Query: 586 LPVPVIVSNFAMYYSHTQARAKLPKKRRRVLP 617
+PVPVIV+NF MYYS A+ KLP+KR++ +P
Sbjct: 467 MPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIP 498
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 79/102 (77%), Gaps = 7/102 (6%)
Query: 142 VSLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGAL 194
+++YYAER+ A P H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGAL
Sbjct: 397 ATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGAL 456
Query: 195 CALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLP 236
CALAGVLTIA+PVPVIV+NF MYYS A+ KLP+KR++ +P
Sbjct: 457 CALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIP 498
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH P DVCGPLFEEEL FWG+D + + + +HRD +E L + + DL
Sbjct: 120 TGKLHCPADVCGPLFEEELAFWGIDETDVE-PCCWMTYRQHRDAEEALDIFETPDLIGGD 178
Query: 61 PSDEE--MARKFGFEEAYF----KGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
P D+E A++ G E+A G+ W++ +P++W+LF++PYSS +A+
Sbjct: 179 PGDDEDLAAKRLGIEDAAGLGGPDGKSGRWRRLQPRMWALFEDPYSSRAAR 229
>sp|Q14B80|KCNC2_MOUSE Potassium voltage-gated channel subfamily C member 2 OS=Mus
musculus GN=Kcnc2 PE=1 SV=1
Length = 642
Score = 292 bits (747), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/332 (46%), Positives = 219/332 (65%), Gaps = 21/332 (6%)
Query: 302 PKMDTEKPSDEE--MARKFGFEEAYF----KGRLSWWQKTKPQLWSLFDEPYSSNSAKII 355
P + P D+E A++ G E+A G+ W+K +P++W+LF++PYSS +A+ I
Sbjct: 176 PDLIGGDPGDDEDLAAKRLGIEDAAGLGGPDGKSGRWRKLQPRMWALFEDPYSSRAARFI 235
Query: 356 GVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAFFYIEC 415
S+FFI +SI +FCL+TH + + N T + TS + +T+ A Y+E
Sbjct: 236 AFASLFFILVSITTFCLETHEAFNI--VKNKTEPVINGTSPVLQYEIETDP--ALTYVEG 291
Query: 416 LCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENADILEF 475
+C WFTFE L+R + SP K EFIK +N+ID++A L FY+++ L +S D+L F
Sbjct: 292 VCVVWFTFEFLVRIVFSPNKLEFIKNLLNIIDFVAILPFYLEVGLSGLSSKAAK-DVLGF 350
Query: 476 FSIIR---IMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI 532
++R I+R+FKLTRH GL++L T RAS E LL+ FL LG++IFA+++YYAER+
Sbjct: 351 LRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERV 410
Query: 533 QANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIA 585
A P H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA
Sbjct: 411 GAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIA 470
Query: 586 LPVPVIVSNFAMYYSHTQARAKLPKKRRRVLP 617
+PVPVIV+NF MYYS A+ KLP+KR++ +P
Sbjct: 471 MPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIP 502
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 79/102 (77%), Gaps = 7/102 (6%)
Query: 142 VSLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGAL 194
+++YYAER+ A P H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGAL
Sbjct: 401 ATMIYYAERVGAQPNDPSASEHTQFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGAL 460
Query: 195 CALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLP 236
CALAGVLTIA+PVPVIV+NF MYYS A+ KLP+KR++ +P
Sbjct: 461 CALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPRKRKKHIP 502
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH P DVCGPLFEEEL FWG+D + + + +HRD +E L + + DL
Sbjct: 124 TGKLHCPADVCGPLFEEELAFWGIDETDVE-PCCWMTYRQHRDAEEALDIFETPDLIGGD 182
Query: 61 PSDEE--MARKFGFEEAYF----KGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
P D+E A++ G E+A G+ W+K +P++W+LF++PYSS +A+
Sbjct: 183 PGDDEDLAAKRLGIEDAAGLGGPDGKSGRWRKLQPRMWALFEDPYSSRAAR 233
>sp|P25122|KCNC1_RAT Potassium voltage-gated channel subfamily C member 1 OS=Rattus
norvegicus GN=Kcnc1 PE=2 SV=1
Length = 585
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 202/315 (64%), Gaps = 15/315 (4%)
Query: 301 GPKMDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSV 360
GP + + EM ++ ++ +W++ +P++W+LF++PYSS A+ + S+
Sbjct: 138 GPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASL 197
Query: 361 FFICISILSFCLKTHPDMRVPVIHNITVRTTHN-TSAWTLDKTQTNAHDAFFYIECLCNA 419
FFI +SI +FCL+TH P+++ + N T + +T A YIE +C
Sbjct: 198 FFILVSITTFCLETHERFN-PIVNKTEIENVRNGTQVRYYREAETEAF--LTYIEGVCVV 254
Query: 420 WFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENADILEFFSII 479
WFTFE LMR + P K EFIK S+N+ID++A L FY+++ L +S D+L F ++
Sbjct: 255 WFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAK-DVLGFLRVV 313
Query: 480 R---IMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANP 536
R I+R+FKLTRH GL++L T RAS E LL+ FL LG++IFA+++YYAERI A P
Sbjct: 314 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQP 373
Query: 537 -------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVP 589
H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA+PVP
Sbjct: 374 NDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVP 433
Query: 590 VIVSNFAMYYSHTQA 604
VIV+NF MYYS A
Sbjct: 434 VIVNNFGMYYSLAMA 448
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 7/88 (7%)
Query: 143 SLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALC 195
+++YYAERI A P H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALC
Sbjct: 361 TMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALC 420
Query: 196 ALAGVLTIALPVPVIVSNFAMYYSHTQA 223
ALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 421 ALAGVLTIAMPVPVIVNNFGMYYSLAMA 448
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH P DVCGPL+EEEL FWG+D + + + +HRD +E L LD
Sbjct: 73 TGKLHCPADVCGPLYEEELAFWGIDETDVE-PCCWMTYRQHRDAEEALDSFGGAPLDNSA 131
Query: 61 -------PSDE-------EMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
P D EM ++ ++ +W++ +P++W+LF++PYSS A+
Sbjct: 132 DDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYAR 190
>sp|P48547|KCNC1_HUMAN Potassium voltage-gated channel subfamily C member 1 OS=Homo
sapiens GN=KCNC1 PE=2 SV=1
Length = 511
Score = 270 bits (691), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/315 (46%), Positives = 202/315 (64%), Gaps = 15/315 (4%)
Query: 301 GPKMDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSV 360
GP + + EM ++ ++ +W++ +P++W+LF++PYSS A+ + S+
Sbjct: 138 GPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASL 197
Query: 361 FFICISILSFCLKTHPDMRVPVIHNITVRTTHN-TSAWTLDKTQTNAHDAFFYIECLCNA 419
FFI +SI +FCL+TH P+++ + N T + +T A YIE +C
Sbjct: 198 FFILVSITTFCLETHERFN-PIVNKTEIENVRNGTQVRYYREAETEAF--LTYIEGVCVV 254
Query: 420 WFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENADILEFFSII 479
WFTFE LMR I P K EFIK S+N+ID++A L FY+++ L +S D+L F ++
Sbjct: 255 WFTFEFLMRVIFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAK-DVLGFLRVV 313
Query: 480 R---IMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANP 536
R I+R+FKLTRH GL++L T RAS E LL+ FL LG++IFA+++YYAERI A P
Sbjct: 314 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQP 373
Query: 537 -------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVP 589
H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA+PVP
Sbjct: 374 NDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVP 433
Query: 590 VIVSNFAMYYSHTQA 604
VIV+NF MYYS A
Sbjct: 434 VIVNNFGMYYSLAMA 448
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 7/88 (7%)
Query: 143 SLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALC 195
+++YYAERI A P H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALC
Sbjct: 361 TMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALC 420
Query: 196 ALAGVLTIALPVPVIVSNFAMYYSHTQA 223
ALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 421 ALAGVLTIAMPVPVIVNNFGMYYSLAMA 448
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH P DVCGPL+EEEL FWG+D + + + +HRD +E L LD
Sbjct: 73 TGKLHCPADVCGPLYEEELAFWGIDETDVE-PCCWMTYRQHRDAEEALDSFGGAPLDNSA 131
Query: 61 -------PSDE-------EMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
P D EM ++ ++ +W++ +P++W+LF++PYSS A+
Sbjct: 132 DDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYAR 190
>sp|P15388|KCNC1_MOUSE Potassium voltage-gated channel subfamily C member 1 OS=Mus
musculus GN=Kcnc1 PE=2 SV=1
Length = 511
Score = 270 bits (689), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/315 (45%), Positives = 202/315 (64%), Gaps = 15/315 (4%)
Query: 301 GPKMDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSV 360
GP + + EM ++ ++ +W++ +P++W+LF++PYSS A+ + S+
Sbjct: 138 GPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYARYVAFASL 197
Query: 361 FFICISILSFCLKTHPDMRVPVIHNITVRTTHN-TSAWTLDKTQTNAHDAFFYIECLCNA 419
FFI +SI +FCL+TH P+++ + N T + +T A YIE +C
Sbjct: 198 FFILVSITTFCLETHERFN-PIVNKTEIENVRNGTQVRYYREAETEAF--LTYIEGVCVV 254
Query: 420 WFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENADILEFFSII 479
WFTFE LMR + P K EFIK S+N+ID++A L FY+++ L +S D+L F ++
Sbjct: 255 WFTFEFLMRVVFCPNKVEFIKNSLNIIDFVAILPFYLEVGLSGLSSKAAK-DVLGFLRVV 313
Query: 480 R---IMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANP 536
R I+R+FKLTRH GL++L T RAS E LL+ FL LG++IFA+++YYAERI A P
Sbjct: 314 RFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGVLIFATMIYYAERIGAQP 373
Query: 537 -------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVP 589
H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALCALAGVLTIA+PVP
Sbjct: 374 NDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVP 433
Query: 590 VIVSNFAMYYSHTQA 604
VIV+NF MYYS A
Sbjct: 434 VIVNNFGMYYSLAMA 448
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/88 (64%), Positives = 68/88 (77%), Gaps = 7/88 (7%)
Query: 143 SLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALC 195
+++YYAERI A P H F +IP+G WWA+VTMTT+GYGDM P+T+ GM VGALC
Sbjct: 361 TMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWAVVTMTTLGYGDMYPQTWSGMLVGALC 420
Query: 196 ALAGVLTIALPVPVIVSNFAMYYSHTQA 223
ALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 421 ALAGVLTIAMPVPVIVNNFGMYYSLAMA 448
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH P DVCGPL+EEEL FWG+D + + + +HRD +E L LD
Sbjct: 73 TGKLHCPADVCGPLYEEELAFWGIDETDVE-PCCWMTYRQHRDAEEALDSFGGAPLDNSA 131
Query: 61 -------PSDE-------EMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
P D EM ++ ++ +W++ +P++W+LF++PYSS A+
Sbjct: 132 DDADADGPGDSGDGEDELEMTKRLALSDSPDGRPGGFWRRWQPRIWALFEDPYSSRYAR 190
>sp|Q01956|KCNC3_RAT Potassium voltage-gated channel subfamily C member 3 OS=Rattus
norvegicus GN=Kcnc3 PE=2 SV=1
Length = 889
Score = 268 bits (686), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 141/291 (48%), Positives = 192/291 (65%), Gaps = 22/291 (7%)
Query: 330 SWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVR 389
+WW++ +P++W+LF++PYSS +A+ + S+FFI ISI +FCL+TH IH I+ +
Sbjct: 268 TWWRRWQPRVWALFEDPYSSRAARYVAFASLFFILISITTFCLETHEGF----IH-ISNK 322
Query: 390 TTHNTSAW------TLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASV 443
T S + + Y+E +C WFTFE LMR P K EF+K+S+
Sbjct: 323 TVTQASPIPGAPPENITNVEVETEPFLTYVEGVCVVWFTFEFLMRVTFCPDKVEFLKSSL 382
Query: 444 NVIDYIATLSFYIDLLLQKFASHLENADILEFFSIIR---IMRLFKLTRHSSGLKILMQT 500
N+ID +A L FY+++ L +S D+L F ++R I+R+FKLTRH GL++L T
Sbjct: 383 NIIDCVAILPFYLEVGLSGLSSKAAK-DVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT 441
Query: 501 FRASAKELTLLVFFLVLGIVIFASLVYYAERIQANP-------HNDFNSIPLGLWWALVT 553
RAS E LL+ FL LG++IFA+++YYAERI A+P H F +IP+G WWA+VT
Sbjct: 442 LRASTNEFLLLIIFLALGVLIFATMIYYAERIGADPDDILGSNHTYFKNIPIGFWWAVVT 501
Query: 554 MTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQA 604
MTT+GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 502 MTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMA 552
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 69/89 (77%), Gaps = 7/89 (7%)
Query: 142 VSLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGAL 194
+++YYAERI A+P H F +IP+G WWA+VTMTT+GYGDM PKT+ GM VGAL
Sbjct: 464 ATMIYYAERIGADPDDILGSNHTYFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGAL 523
Query: 195 CALAGVLTIALPVPVIVSNFAMYYSHTQA 223
CALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 524 CALAGVLTIAMPVPVIVNNFGMYYSLAMA 552
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 36/139 (25%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIES-NFRSIIKHRDTQETLAVLDRLDLDTE 59
TGKLH P DVCGPLFEEEL FWG+D + +E+ + + +HRD +E L + D
Sbjct: 155 TGKLHCPADVCGPLFEEELGFWGID--ETDVEACCWMTYRQHRDAEEALDSFEAPDSSGN 212
Query: 60 KPSDEEMARKFGFEEAYFKG------------RL---------------------SWWQK 86
++ A G ++ G RL +WW++
Sbjct: 213 ANANAGGAHDAGLDDEAGAGGGGLDGAGGELKRLCFQDAGGGAGGPAGGPGGAGGTWWRR 272
Query: 87 TKPQLWSLFDEPYSSNSAK 105
+P++W+LF++PYSS +A+
Sbjct: 273 WQPRVWALFEDPYSSRAAR 291
>sp|Q63959|KCNC3_MOUSE Potassium voltage-gated channel subfamily C member 3 OS=Mus
musculus GN=Kcnc3 PE=2 SV=2
Length = 769
Score = 267 bits (683), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/291 (48%), Positives = 192/291 (65%), Gaps = 22/291 (7%)
Query: 330 SWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVR 389
+WW++ +P++W+LF++PYSS +A+ + S+FFI ISI +FCL+TH IH I+ +
Sbjct: 267 TWWRRWQPRVWALFEDPYSSRAARYVAFASLFFILISITTFCLETHEGF----IH-ISNK 321
Query: 390 TTHNTSAW------TLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASV 443
T S + + Y+E +C WFTFE LMR P K EF+K+S+
Sbjct: 322 TVTQASPIPGAPPENITNVEVETEPFLTYVEGVCVVWFTFEFLMRVTFCPDKVEFLKSSL 381
Query: 444 NVIDYIATLSFYIDLLLQKFASHLENADILEFFSIIR---IMRLFKLTRHSSGLKILMQT 500
N+ID +A L FY+++ L +S D+L F ++R I+R+FKLTRH GL++L T
Sbjct: 382 NIIDCVAILPFYLEVGLSGLSSKAAK-DVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT 440
Query: 501 FRASAKELTLLVFFLVLGIVIFASLVYYAERIQANP-------HNDFNSIPLGLWWALVT 553
RAS E LL+ FL LG++IFA+++YYAERI A+P H F +IP+G WWA+VT
Sbjct: 441 LRASTNEFLLLIIFLALGVLIFATMIYYAERIGADPDDILGSNHTYFKNIPIGFWWAVVT 500
Query: 554 MTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQA 604
MTT+GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 501 MTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMA 551
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 69/88 (78%), Gaps = 7/88 (7%)
Query: 143 SLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALC 195
+++YYAERI A+P H F +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALC
Sbjct: 464 TMIYYAERIGADPDDILGSNHTYFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALC 523
Query: 196 ALAGVLTIALPVPVIVSNFAMYYSHTQA 223
ALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 524 ALAGVLTIAMPVPVIVNNFGMYYSLAMA 551
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 34/138 (24%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH P DVCGPLFEEEL FWG+D + + + +HRD +E L + D
Sbjct: 154 TGKLHCPADVCGPLFEEELGFWGIDETDVE-ACCWMTYRQHRDAEEALDSFEAPDSSANA 212
Query: 61 PSDEEMARKFGFEEAYFKG------------RL---------------------SWWQKT 87
++ A G ++ G RL +WW++
Sbjct: 213 NANAGGAHDAGLDDEAGAGGGGLDGAGGELKRLCFQDAGGGAGGPAGGAGGAGGTWWRRW 272
Query: 88 KPQLWSLFDEPYSSNSAK 105
+P++W+LF++PYSS +A+
Sbjct: 273 QPRVWALFEDPYSSRAAR 290
>sp|Q14003|KCNC3_HUMAN Potassium voltage-gated channel subfamily C member 3 OS=Homo
sapiens GN=KCNC3 PE=1 SV=3
Length = 757
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/291 (48%), Positives = 192/291 (65%), Gaps = 22/291 (7%)
Query: 330 SWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVR 389
+WW++ +P++W+LF++PYSS +A+ + S+FFI ISI +FCL+TH IH I+ +
Sbjct: 267 TWWRRWQPRVWALFEDPYSSRAARYVAFASLFFILISITTFCLETHEGF----IH-ISNK 321
Query: 390 TTHNTSAW------TLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASV 443
T S + + Y+E +C WFTFE LMR P K EF+K+S+
Sbjct: 322 TVTQASPIPGAPPENITNVEVETEPFLTYVEGVCVVWFTFEFLMRITFCPDKVEFLKSSL 381
Query: 444 NVIDYIATLSFYIDLLLQKFASHLENADILEFFSIIR---IMRLFKLTRHSSGLKILMQT 500
N+ID +A L FY+++ L +S D+L F ++R I+R+FKLTRH GL++L T
Sbjct: 382 NIIDCVAILPFYLEVGLSGLSSKAAK-DVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHT 440
Query: 501 FRASAKELTLLVFFLVLGIVIFASLVYYAERIQANP-------HNDFNSIPLGLWWALVT 553
RAS E LL+ FL LG++IFA+++YYAERI A+P H F +IP+G WWA+VT
Sbjct: 441 LRASTNEFLLLIIFLALGVLIFATMIYYAERIGADPDDILGSNHTYFKNIPIGFWWAVVT 500
Query: 554 MTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQA 604
MTT+GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 501 MTTLGYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMA 551
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 69/88 (78%), Gaps = 7/88 (7%)
Query: 143 SLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALC 195
+++YYAERI A+P H F +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALC
Sbjct: 464 TMIYYAERIGADPDDILGSNHTYFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALC 523
Query: 196 ALAGVLTIALPVPVIVSNFAMYYSHTQA 223
ALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 524 ALAGVLTIAMPVPVIVNNFGMYYSLAMA 551
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 35/139 (25%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLD-------- 52
TGKLH P DVCGPLFEEEL FWG+D + + + +HRD +E L +
Sbjct: 153 TGKLHCPADVCGPLFEEELGFWGIDETDVE-ACCWMTYRQHRDAEEALDSFEAPDPAGAA 211
Query: 53 ----------------RLDLDTEKPSDEEMARKFGFEE----------AYFKGRLSWWQK 86
++ F++ +WW++
Sbjct: 212 NAANAAGAHDGGLDDEAGAGGGGLDGAGGELKRLCFQDAGGGAGGPPGGAGGAGGTWWRR 271
Query: 87 TKPQLWSLFDEPYSSNSAK 105
+P++W+LF++PYSS +A+
Sbjct: 272 WQPRVWALFEDPYSSRAAR 290
>sp|Q03721|KCNC4_HUMAN Potassium voltage-gated channel subfamily C member 4 OS=Homo
sapiens GN=KCNC4 PE=1 SV=2
Length = 635
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/283 (48%), Positives = 187/283 (66%), Gaps = 16/283 (5%)
Query: 332 WQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTT 391
WQ P++W+LF++PYSS +A+++ S+FFI +SI +FCL+TH + +R
Sbjct: 208 WQ---PRMWALFEDPYSSRAARVVAFASLFFILVSITTFCLETHEAFNIDRNVTEILRVG 264
Query: 392 HNTSAWTLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIAT 451
+ TS + +T YIE +C WFT E L+R + P +F+K +N+ID++A
Sbjct: 265 NITSVHFRREVETEP--ILTYIEGVCVLWFTLEFLVRIVCCPDTLDFVKNLLNIIDFVAI 322
Query: 452 LSFYIDLLLQKFASHLENADILEFFSIIR---IMRLFKLTRHSSGLKILMQTFRASAKEL 508
L FY+++ L +S D+L F ++R I+R+FKLTRH GL++L T RAS E
Sbjct: 323 LPFYLEVGLSGLSSKAAR-DVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEF 381
Query: 509 TLLVFFLVLGIVIFASLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGD 561
LL+ FL LG++IFA+++YYAERI A P H DF +IP+G WWA+VTMTT+GYGD
Sbjct: 382 LLLIIFLALGVLIFATMIYYAERIGARPSDPRGNDHTDFKNIPIGFWWAVVTMTTLGYGD 441
Query: 562 MAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQA 604
M PKT+ GM VGALCALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 442 MYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMA 484
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 69/88 (78%), Gaps = 7/88 (7%)
Query: 143 SLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALC 195
+++YYAERI A P H DF +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALC
Sbjct: 397 TMIYYAERIGARPSDPRGNDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALC 456
Query: 196 ALAGVLTIALPVPVIVSNFAMYYSHTQA 223
ALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 457 ALAGVLTIAMPVPVIVNNFGMYYSLAMA 484
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 43/198 (21%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLD--LDT 58
TGKLH P DVCGPLFEEEL FWG+D + + + +HRD +E L + + D
Sbjct: 112 TGKLHCPADVCGPLFEEELTFWGIDETDVE-PCCWMTYRQHRDAEEALDIFESPDGGGSG 170
Query: 59 EKPSDE------EMA-RKFGFEEAYFKGRLSW-----WQKTKPQLWSLFDEPYSSNSAK- 105
PSDE E+A ++ G E WQ P++W+LF++PYSS +A+
Sbjct: 171 AGPSDEAGDDERELALQRLGPHEGGAGHGAGSGGCRGWQ---PRMWALFEDPYSSRAARV 227
Query: 106 -------------DNEALQVDEAFVGLENLDANVPCICKRTDPSSVFPCVSLVYYAERIQ 152
L+ EAF N+D NV I + + +S V++ ++
Sbjct: 228 VAFASLFFILVSITTFCLETHEAF----NIDRNVTEILRVGNITS-------VHFRREVE 276
Query: 153 ANPHNDFNSIPLGLWWAL 170
P + LW+ L
Sbjct: 277 TEPILTYIEGVCVLWFTL 294
>sp|Q8R1C0|KCNC4_MOUSE Potassium voltage-gated channel subfamily C member 4 OS=Mus
musculus GN=Kcnc4 PE=2 SV=1
Length = 628
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 137/287 (47%), Positives = 187/287 (65%), Gaps = 24/287 (8%)
Query: 332 WQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHP----DMRVPVIHNIT 387
WQ P++W+LF++PYSS +A+++ S+FFI +SI +FCL+TH D V IH +
Sbjct: 212 WQ---PRMWALFEDPYSSRAARVVAFASLFFILVSITTFCLETHEAFNIDRNVTEIHRVG 268
Query: 388 VRTTHNTSAWTLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVID 447
T+ + + YIE +C WFT E L+R + P +F+K +N+ID
Sbjct: 269 NITSVRF------RREVETEPILTYIEGVCVMWFTLEFLVRIVCCPDTLDFVKNLLNIID 322
Query: 448 YIATLSFYIDLLLQKFASHLENADILEFFSIIR---IMRLFKLTRHSSGLKILMQTFRAS 504
++A L FY+++ L +S D+L F ++R I+R+FKLTRH GL++L T RAS
Sbjct: 323 FVAILPFYLEVGLSGLSSKAAR-DVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRAS 381
Query: 505 AKELTLLVFFLVLGIVIFASLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTV 557
E LL+ FL LG++IFA+++YYAERI A P H DF +IP+G WWA+VTMTT+
Sbjct: 382 TNEFLLLIIFLALGVLIFATMIYYAERIGARPSDPRGNDHTDFKNIPIGFWWAVVTMTTL 441
Query: 558 GYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQA 604
GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 442 GYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMA 488
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 69/88 (78%), Gaps = 7/88 (7%)
Query: 143 SLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALC 195
+++YYAERI A P H DF +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALC
Sbjct: 401 TMIYYAERIGARPSDPRGNDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALC 460
Query: 196 ALAGVLTIALPVPVIVSNFAMYYSHTQA 223
ALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 461 ALAGVLTIAMPVPVIVNNFGMYYSLAMA 488
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 44/170 (25%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVL--------- 51
TGKLH P DVCGPLFEEEL FWG+D + + + +HRD +E L +
Sbjct: 116 TGKLHCPADVCGPLFEEELTFWGIDETDVE-PCCWMTYRQHRDAEEALDIFESPDGGGGG 174
Query: 52 ---------DRLDLDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSN 102
D +L ++ E G +G WQ P++W+LF++PYSS
Sbjct: 175 AGPGDEAGDDERELALQRLGPHEGGSGPGAGSGGCRG----WQ---PRMWALFEDPYSSR 227
Query: 103 SAK--------------DNEALQVDEAFVGLENLDANVPCICKRTDPSSV 138
+A+ L+ EAF N+D NV I + + +SV
Sbjct: 228 AARVVAFASLFFILVSITTFCLETHEAF----NIDRNVTEIHRVGNITSV 273
>sp|Q63734|KCNC4_RAT Potassium voltage-gated channel subfamily C member 4 OS=Rattus
norvegicus GN=Kcnc4 PE=1 SV=1
Length = 625
Score = 259 bits (662), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/287 (47%), Positives = 187/287 (65%), Gaps = 24/287 (8%)
Query: 332 WQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHP----DMRVPVIHNIT 387
WQ P++W+LF++PYSS +A+++ S+FFI +SI +FCL+TH D V IH +
Sbjct: 209 WQ---PRMWALFEDPYSSRAARVVAFASLFFILVSITTFCLETHEAFNIDRNVTEIHRVG 265
Query: 388 VRTTHNTSAWTLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVID 447
T+ + + YIE +C WFT E L+R + P +F+K +N+ID
Sbjct: 266 NITSVRF------RREVETEPILTYIEGVCVMWFTLEFLVRIVCCPDTLDFVKNLLNIID 319
Query: 448 YIATLSFYIDLLLQKFASHLENADILEFFSIIR---IMRLFKLTRHSSGLKILMQTFRAS 504
++A L FY+++ L +S D+L F ++R I+R+FKLTRH GL++L T RAS
Sbjct: 320 FVAILPFYLEVGLSGLSSKAAR-DVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRAS 378
Query: 505 AKELTLLVFFLVLGIVIFASLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTV 557
E LL+ FL LG++IFA+++YYAERI A P H DF +IP+G WWA+VTMTT+
Sbjct: 379 TNEFLLLIIFLALGVLIFATMIYYAERIGARPSDPRGNDHTDFKNIPIGFWWAVVTMTTL 438
Query: 558 GYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQA 604
GYGDM PKT+ GM VGALCALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 439 GYGDMYPKTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMA 485
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 69/88 (78%), Gaps = 7/88 (7%)
Query: 143 SLVYYAERIQANP-------HNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALC 195
+++YYAERI A P H DF +IP+G WWA+VTMTT+GYGDM PKT+ GM VGALC
Sbjct: 398 TMIYYAERIGARPSDPRGNDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGMLVGALC 457
Query: 196 ALAGVLTIALPVPVIVSNFAMYYSHTQA 223
ALAGVLTIA+PVPVIV+NF MYYS A
Sbjct: 458 ALAGVLTIAMPVPVIVNNFGMYYSLAMA 485
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 44/170 (25%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVL--------- 51
TGKLH P DVCGPLFEEEL FWG+D + + + +HRD +E L +
Sbjct: 113 TGKLHCPADVCGPLFEEELTFWGIDETDVE-PCCWMTYRQHRDAEEALDIFESPDGGGGG 171
Query: 52 ---------DRLDLDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSN 102
D +L ++ E G +G WQ P++W+LF++PYSS
Sbjct: 172 AGPGDEAGDDERELALQRLGPHEGGSGPGAGSGGCRG----WQ---PRMWALFEDPYSSR 224
Query: 103 SAK--------------DNEALQVDEAFVGLENLDANVPCICKRTDPSSV 138
+A+ L+ EAF N+D NV I + + +SV
Sbjct: 225 AARVVAFASLFFILVSITTFCLETHEAF----NIDRNVTEIHRVGNITSV 270
>sp|P10499|KCNA1_RAT Potassium voltage-gated channel subfamily A member 1 OS=Rattus
norvegicus GN=Kcna1 PE=1 SV=1
Length = 495
Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 205/338 (60%), Gaps = 19/338 (5%)
Query: 293 ANNPKEMMGPKMDTEKPSDEEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSN 350
N P +M ++ + +E M KF +E + K R ++ + Q+W LF+ P SS
Sbjct: 106 VNVPLDMFSEEIKFYELGEEAM-EKFREDEGFIKEEERPLPEKEYQRQVWLLFEYPESSG 164
Query: 351 SAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAF 410
A++I +VSV I ISI+ FCL+T P+++ T+ NT T+ T D F
Sbjct: 165 PARVIAIVSVMVILISIVIFCLETLPELKDDKDFTGTIHRIDNT---TVIYTSNIFTDPF 221
Query: 411 FYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYI----DLLLQKFASH 466
F +E LC WF+FE+++RF + P K +F K +N ID +A + ++I ++ Q+
Sbjct: 222 FIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQEGNQK 281
Query: 467 LENAD---ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFA 523
E A IL ++R+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+
Sbjct: 282 GEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFS 341
Query: 524 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 583
S VY+AE +A H F+SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 342 SAVYFAEAEEAESH--FSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLT 399
Query: 584 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQP 621
IALPVPVIVSNF +Y R +++ ++L V P
Sbjct: 400 IALPVPVIVSNFNYFYH----RETEGEEQAQLLHVSSP 433
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 67/98 (68%), Gaps = 6/98 (6%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE +A H F+SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 342 SAVYFAEAEEAESH--FSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLT 399
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQP 240
IALPVPVIVSNF +Y R +++ ++L V P
Sbjct: 400 IALPVPVIVSNFNYFYH----RETEGEEQAQLLHVSSP 433
>sp|P16388|KCNA1_MOUSE Potassium voltage-gated channel subfamily A member 1 OS=Mus
musculus GN=Kcna1 PE=2 SV=1
Length = 495
Score = 242 bits (618), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 205/338 (60%), Gaps = 19/338 (5%)
Query: 293 ANNPKEMMGPKMDTEKPSDEEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSN 350
N P +M ++ + +E M KF +E + K R ++ + Q+W LF+ P SS
Sbjct: 106 VNVPLDMFSEEIKFYELGEEAM-EKFREDEGFIKEEERPLPEKEYQRQVWLLFEYPESSG 164
Query: 351 SAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAF 410
A++I +VSV I ISI+ FCL+T P+++ T+ NT T+ T D F
Sbjct: 165 PARVIAIVSVMVILISIVIFCLETLPELKDDKDFTGTIHRIDNT---TVIYTSNIFTDPF 221
Query: 411 FYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYI----DLLLQKFASH 466
F +E LC WF+FE+++RF + P K +F K +N ID +A + ++I ++ Q+
Sbjct: 222 FIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQEGNQK 281
Query: 467 LENAD---ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFA 523
E A IL ++R+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+
Sbjct: 282 GEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFS 341
Query: 524 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 583
S VY+AE +A H F+SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 342 SAVYFAEAEEAESH--FSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLT 399
Query: 584 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQP 621
IALPVPVIVSNF +Y R +++ ++L V P
Sbjct: 400 IALPVPVIVSNFNYFYH----RETEGEEQAQLLHVSSP 433
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 67/98 (68%), Gaps = 6/98 (6%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE +A H F+SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 342 SAVYFAEAEEAESH--FSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLT 399
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQP 240
IALPVPVIVSNF +Y R +++ ++L V P
Sbjct: 400 IALPVPVIVSNFNYFYH----RETEGEEQAQLLHVSSP 433
>sp|Q09470|KCNA1_HUMAN Potassium voltage-gated channel subfamily A member 1 OS=Homo
sapiens GN=KCNA1 PE=1 SV=2
Length = 495
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/338 (41%), Positives = 204/338 (60%), Gaps = 19/338 (5%)
Query: 293 ANNPKEMMGPKMDTEKPSDEEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSN 350
N P +M ++ + +E M KF +E + K R ++ + Q+W LF+ P SS
Sbjct: 106 VNVPLDMFSEEIKFYELGEEAM-EKFREDEGFIKEEERPLPEKEYQRQVWLLFEYPESSG 164
Query: 351 SAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAF 410
A++I +VSV I ISI+ FCL+T P+++ TV NT+ T D F
Sbjct: 165 PARVIAIVSVMVILISIVIFCLETLPELKDDKDFTGTVHRIDNTTVIYNSNIFT---DPF 221
Query: 411 FYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYI----DLLLQKFASH 466
F +E LC WF+FE+++RF + P K +F K +N ID +A + ++I ++ Q+
Sbjct: 222 FIVETLCIIWFSFELVVRFFACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQEGNQK 281
Query: 467 LENAD---ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFA 523
E A IL ++R+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+
Sbjct: 282 GEQATSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFS 341
Query: 524 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 583
S VY+AE +A H F+SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 342 SAVYFAEAEEAESH--FSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLT 399
Query: 584 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQP 621
IALPVPVIVSNF +Y R +++ ++L V P
Sbjct: 400 IALPVPVIVSNFNYFYH----RETEGEEQAQLLHVSSP 433
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 67/98 (68%), Gaps = 6/98 (6%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE +A H F+SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 342 SAVYFAEAEEAESH--FSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLT 399
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQP 240
IALPVPVIVSNF +Y R +++ ++L V P
Sbjct: 400 IALPVPVIVSNFNYFYH----RETEGEEQAQLLHVSSP 433
>sp|P16390|KCNA3_MOUSE Potassium voltage-gated channel subfamily A member 3 OS=Mus
musculus GN=Kcna3 PE=2 SV=3
Length = 528
Score = 238 bits (608), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 182/299 (60%), Gaps = 13/299 (4%)
Query: 312 EEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILS 369
EE KF +E + + R + + Q+W LF+ P SS A+ I +VSV I ISI+
Sbjct: 144 EEAMEKFREDEGFLREEERPLPRRDFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVI 203
Query: 370 FCLKTHPDMR----VPVIHNITVRTTHNTSAWTLDKTQTNAHDAFFYIECLCNAWFTFEI 425
FCL+T P+ R P + V N S ++ D FF +E LC WF+FE+
Sbjct: 204 FCLETLPEFRDEKDYPASPSQDVFEAANNSTSGAPSGASSFSDPFFVVETLCIIWFSFEL 263
Query: 426 LMRFISSPRKCEFIKASVNVIDYIATLSFYIDL-----LLQKFASHLENADILEFFSIIR 480
L+RF + P K F + +N+ID +A + ++I L Q + IL ++R
Sbjct: 264 LVRFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVR 323
Query: 481 IMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPHNDF 540
+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+S VY+AE +P + F
Sbjct: 324 VFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE--ADDPSSGF 381
Query: 541 NSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYY 599
NSIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF +Y
Sbjct: 382 NSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 440
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE +P + FNSIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 367 SAVYFAE--ADDPSSGFNSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLT 424
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 425 IALPVPVIVSNFNYFY 440
>sp|P15384|KCNA3_RAT Potassium voltage-gated channel subfamily A member 3 OS=Rattus
norvegicus GN=Kcna3 PE=1 SV=2
Length = 525
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/299 (44%), Positives = 182/299 (60%), Gaps = 13/299 (4%)
Query: 312 EEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILS 369
EE KF +E + + R + + Q+W LF+ P SS A+ I +VSV I ISI+
Sbjct: 141 EEAMEKFREDEGFLREEERPLPRRDFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVI 200
Query: 370 FCLKTHPDMR----VPVIHNITVRTTHNTSAWTLDKTQTNAHDAFFYIECLCNAWFTFEI 425
FCL+T P+ R P + V N S ++ D FF +E LC WF+FE+
Sbjct: 201 FCLETLPEFRDEKDYPASPSQDVFEAANNSTSGASSGASSFSDPFFVVETLCIIWFSFEL 260
Query: 426 LMRFISSPRKCEFIKASVNVIDYIATLSFYIDL-----LLQKFASHLENADILEFFSIIR 480
L+RF + P K F + +N+ID +A + ++I L Q + IL ++R
Sbjct: 261 LVRFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRLVR 320
Query: 481 IMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPHNDF 540
+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+S VY+AE +P + F
Sbjct: 321 VFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE--ADDPSSGF 378
Query: 541 NSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYY 599
NSIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF +Y
Sbjct: 379 NSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 437
Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE +P + FNSIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 364 SAVYFAE--ADDPSSGFNSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLT 421
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 422 IALPVPVIVSNFNYFY 437
>sp|P16389|KCNA2_HUMAN Potassium voltage-gated channel subfamily A member 2 OS=Homo
sapiens GN=KCNA2 PE=1 SV=2
Length = 499
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 185/302 (61%), Gaps = 18/302 (5%)
Query: 312 EEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILS 369
EE F +E Y K R + + Q+W LF+ P SS A+II +VSV I ISI+S
Sbjct: 120 EEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVS 179
Query: 370 FCLKTHPDMRVP--VIHNITVRTTHNTSAWTLDKTQ-TNAHDAFFYIECLCNAWFTFEIL 426
FCL+T P R +H V T H S T+ Q T+ D FF +E LC WF+FE L
Sbjct: 180 FCLETLPIFRDENEDMHGSGV-TFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFL 238
Query: 427 MRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENAD---------ILEFFS 477
+RF + P K F +N+ID +A + ++I L + A E+A IL
Sbjct: 239 VRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTE-LAEKPEDAQQGQQAMSLAILRVIR 297
Query: 478 IIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPH 537
++R+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+S VY+AE +
Sbjct: 298 LVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADER--E 355
Query: 538 NDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAM 597
+ F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 356 SQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNY 415
Query: 598 YY 599
+Y
Sbjct: 416 FY 417
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + + F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 344 SAVYFAEADER--ESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLT 401
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 402 IALPVPVIVSNFNYFY 417
>sp|P63142|KCNA2_RAT Potassium voltage-gated channel subfamily A member 2 OS=Rattus
norvegicus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 186/302 (61%), Gaps = 18/302 (5%)
Query: 312 EEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILS 369
EE F +E Y K R + + Q+W LF+ P SS A+II +VSV I ISI+S
Sbjct: 120 EEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVS 179
Query: 370 FCLKTHPDMRVP--VIHNITVRTTHNTSAWTLDKTQ-TNAHDAFFYIECLCNAWFTFEIL 426
FCL+T P R +H V T H S T+ Q T+ D FF +E LC WF+FE L
Sbjct: 180 FCLETLPIFRDENEDMHGGGV-TFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFL 238
Query: 427 MRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENAD---------ILEFFS 477
+RF + P K F +N+ID +A + ++I L + A E+A IL
Sbjct: 239 VRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTE-LAEKPEDAQQGQQAMSLAILRVIR 297
Query: 478 IIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPH 537
++R+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+S VY+AE + +
Sbjct: 298 LVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERD-- 355
Query: 538 NDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAM 597
+ F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 356 SQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNY 415
Query: 598 YY 599
+Y
Sbjct: 416 FY 417
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + + + F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 344 SAVYFAEADERD--SQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLT 401
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 402 IALPVPVIVSNFNYFY 417
>sp|P63141|KCNA2_MOUSE Potassium voltage-gated channel subfamily A member 2 OS=Mus
musculus GN=Kcna2 PE=1 SV=1
Length = 499
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 186/302 (61%), Gaps = 18/302 (5%)
Query: 312 EEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILS 369
EE F +E Y K R + + Q+W LF+ P SS A+II +VSV I ISI+S
Sbjct: 120 EEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVS 179
Query: 370 FCLKTHPDMRVP--VIHNITVRTTHNTSAWTLDKTQ-TNAHDAFFYIECLCNAWFTFEIL 426
FCL+T P R +H V T H S T+ Q T+ D FF +E LC WF+FE L
Sbjct: 180 FCLETLPIFRDENEDMHGGGV-TFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFL 238
Query: 427 MRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENAD---------ILEFFS 477
+RF + P K F +N+ID +A + ++I L + A E+A IL
Sbjct: 239 VRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTE-LAEKPEDAQQGQQAMSLAILRVIR 297
Query: 478 IIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPH 537
++R+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+S VY+AE + +
Sbjct: 298 LVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERD-- 355
Query: 538 NDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAM 597
+ F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 356 SQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNY 415
Query: 598 YY 599
+Y
Sbjct: 416 FY 417
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + + + F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 344 SAVYFAEADERD--SQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLT 401
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 402 IALPVPVIVSNFNYFY 417
>sp|Q28293|KCNA2_CANFA Potassium voltage-gated channel subfamily A member 2 OS=Canis
familiaris GN=KCNA2 PE=2 SV=1
Length = 499
Score = 235 bits (600), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 139/302 (46%), Positives = 185/302 (61%), Gaps = 18/302 (5%)
Query: 312 EEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILS 369
EE F +E Y K R + + Q+W LF+ P SS A+II +VSV I ISI+S
Sbjct: 120 EEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVS 179
Query: 370 FCLKTHPDMRVP--VIHNITVRTTHNTSAWTLDKTQ-TNAHDAFFYIECLCNAWFTFEIL 426
FCL+T P R +H V T H S T+ Q T+ D FF +E LC WF+FE L
Sbjct: 180 FCLETLPIFRDENEDMHGGGV-TFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFL 238
Query: 427 MRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENAD---------ILEFFS 477
+RF + P K F +N+ID +A + ++I L + A E+A IL
Sbjct: 239 VRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTE-LAEKPEDAQQGQQAMSLAILRVIR 297
Query: 478 IIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPH 537
++R+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+S VY+AE +
Sbjct: 298 LVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADER--E 355
Query: 538 NDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAM 597
+ F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF
Sbjct: 356 SQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNY 415
Query: 598 YY 599
+Y
Sbjct: 416 FY 417
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + + F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 344 SAVYFAEADER--ESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLT 401
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 402 IALPVPVIVSNFNYFY 417
>sp|Q9I830|KCNA2_ONCMY Potassium voltage-gated channel subfamily A member 2
OS=Oncorhynchus mykiss GN=kcna2 PE=2 SV=1
Length = 494
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 171/271 (63%), Gaps = 14/271 (5%)
Query: 338 QLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAW 397
Q+W LF+ P SS A+II ++SV I ISI+SFCL+T P R +V T+ +
Sbjct: 147 QVWLLFEYPESSGPARIIAIISVMVILISIVSFCLETLPIFRNDDDEPHSVFDTNTNT-- 204
Query: 398 TLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYID 457
T+ T T D FF +E LC WF+FE L+R + P K F +N+ID +A + ++I
Sbjct: 205 TIYFTSTYFTDPFFILETLCIIWFSFEFLVRLFACPSKSGFFGNVMNIIDVVAIIPYFIT 264
Query: 458 LLLQKFASHLENAD---------ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKEL 508
L + A E+ IL ++R+ R+FKL+RHS GL+IL QT +AS +EL
Sbjct: 265 LATE-LAEKPEDGQAGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMREL 323
Query: 509 TLLVFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYV 568
LL+FFL +G+++F+S VY+AE P + F SIP WWA+V+MTTVGYGDM P T
Sbjct: 324 GLLIFFLFIGVILFSSAVYFAE--ADEPESQFESIPDAFWWAVVSMTTVGYGDMVPTTIG 381
Query: 569 GMFVGALCALAGVLTIALPVPVIVSNFAMYY 599
G VG+LCA+AGVLTIALPVPVIVSNF +Y
Sbjct: 382 GKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 412
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE P + F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 339 SAVYFAE--ADEPESQFESIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLT 396
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 397 IALPVPVIVSNFNYFY 412
>sp|P22001|KCNA3_HUMAN Potassium voltage-gated channel subfamily A member 3 OS=Homo
sapiens GN=KCNA3 PE=2 SV=3
Length = 575
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 184/301 (61%), Gaps = 17/301 (5%)
Query: 312 EEMARKFGFEEAYFKG--RLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILS 369
EE KF +E + + R + + Q+W LF+ P SS A+ I +VSV I ISI+
Sbjct: 191 EEAMEKFREDEGFLREEERPLPRRDFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVI 250
Query: 370 FCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQ------TNAHDAFFYIECLCNAWFTF 423
FCL+T P+ R + T+ ++ + T ++ D FF +E LC WF+F
Sbjct: 251 FCLETLPEFRDE--KDYPASTSQDSFEAAGNSTSGSRAGASSFSDPFFVVETLCIIWFSF 308
Query: 424 EILMRFISSPRKCEFIKASVNVIDYIATLSFYIDL-----LLQKFASHLENADILEFFSI 478
E+L+RF + P K F + +N+ID +A + ++I L Q + IL +
Sbjct: 309 ELLVRFFACPSKATFSRNIMNLIDIVAIIPYFITLGTELAERQGNGQQAMSLAILRVIRL 368
Query: 479 IRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPHN 538
+R+ R+FKL+RHS GL+IL QT +AS +EL LL+FFL +G+++F+S VY+AE +P +
Sbjct: 369 VRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE--ADDPTS 426
Query: 539 DFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMY 598
F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIVSNF +
Sbjct: 427 GFSSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF 486
Query: 599 Y 599
Y
Sbjct: 487 Y 487
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE +P + F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 414 SAVYFAE--ADDPTSGFSSIPDAFWWAVVTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLT 471
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 472 IALPVPVIVSNFNYFY 487
>sp|Q9MZ19|KCNB1_RABIT Potassium voltage-gated channel subfamily B member 1 OS=Oryctolagus
cuniculus GN=KCNB1 PE=2 SV=1
Length = 858
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 182/297 (61%), Gaps = 26/297 (8%)
Query: 334 KTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHN 393
+ + +LW L ++P SS +AKI+ ++S+ FI +S ++ L T P+++
Sbjct: 170 EKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQ-------------- 215
Query: 394 TSAWTLDK-TQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATL 452
+LD+ QT + ++E +C AWFT E L+RF+SSP+K +F K +N ID +A L
Sbjct: 216 ----SLDEFGQTTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAIL 271
Query: 453 SFYIDLLL---QKFASHLENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKEL 508
+Y+ + L K +N +++ F I+RI+R+ KL RHS+GL+ L T R S EL
Sbjct: 272 PYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNEL 331
Query: 509 TLLVFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYV 568
LL+ FL +GI+IF+SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +
Sbjct: 332 GLLILFLAMGIMIFSSLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLL 389
Query: 569 GMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 625
G VG LC +AGVL IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 390 GKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 347 SLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 404
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 244
IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 405 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TG+LH ++C F +EL++WG+D E S + R Q+ + ++ E
Sbjct: 101 TGRLHMMEEMCALSFSQELDYWGID------EIYLESCCQARYHQK------KEQMNEEL 148
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
+ E R+ EE F ++ K LW L ++P SS +AK
Sbjct: 149 KREAETLREREGEE--FDNTCCAEKRKK--LWDLLEKPNSSVAAK 189
>sp|P08510|KCNAS_DROME Potassium voltage-gated channel protein Shaker OS=Drosophila
melanogaster GN=Sh PE=1 SV=3
Length = 655
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/321 (40%), Positives = 186/321 (57%), Gaps = 28/321 (8%)
Query: 312 EEMARKFGFEEAYFKGRLSWWQKTKPQ--LWSLFDEPYSSNSAKIIGVVSVFFICISILS 369
++ KF +E + K + Q +W LF+ P SS +A+++ ++SVF I +SI+
Sbjct: 184 DQAINKFREDEGFIKEEERPLPDNEKQRKVWLLFEYPESSQAARVVAIISVFVILLSIVI 243
Query: 370 FCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAFFYIECLCNAWFTFEILMRF 429
FCL+T P+ + H TT N + D+ + D FF IE LC WFTFE+ +RF
Sbjct: 244 FCLETLPEFK----HYKVFNTTTNGTKIEEDEV-PDITDPFFLIETLCIIWFTFELTVRF 298
Query: 430 ISSPRKCEFIKASVNVIDYIATLSFYIDLLL-------------------QKFASHLENA 470
++ P K F + +NVID IA + ++I L K ++ +
Sbjct: 299 LACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSL 358
Query: 471 DILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAE 530
IL ++R+ R+FKL+RHS GL+IL +T +AS +EL LL+FFL +G+V+F+S VY+AE
Sbjct: 359 AILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAE 418
Query: 531 RIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPV 590
N F SIP WWA+VTMTTVGYGDM P G VG+LCA+AGVLTIALPVPV
Sbjct: 419 AGSENSF--FKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPV 476
Query: 591 IVSNFAMYYSHTQARAKLPKK 611
IVSNF +Y + ++ +
Sbjct: 477 IVSNFNYFYHRETDQEEMQSQ 497
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE N F SIP WWA+VTMTTVGYGDM P G VG+LCA+AGVLT
Sbjct: 412 SAVYFAEAGSENSF--FKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLT 469
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKK 230
IALPVPVIVSNF +Y + ++ +
Sbjct: 470 IALPVPVIVSNFNYFYHRETDQEEMQSQ 497
>sp|Q92953|KCNB2_HUMAN Potassium voltage-gated channel subfamily B member 2 OS=Homo
sapiens GN=KCNB2 PE=2 SV=2
Length = 911
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/285 (42%), Positives = 175/285 (61%), Gaps = 24/285 (8%)
Query: 336 KPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTS 395
+ +LW L ++P SS +AKI+ +VS+ FI +S ++ L T P+++
Sbjct: 176 RKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSLNTLPELQ---------------- 219
Query: 396 AWTLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFY 455
T + Q N + ++E +C AWFT E L+RF+SSP K +F K +NVID +A L +Y
Sbjct: 220 -ETDEFGQLNDNRQLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYY 278
Query: 456 IDLLL---QKFASHLENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLL 511
+ + L K +N +++ F I+RI+R+ KL RHS+GL+ L T R S EL LL
Sbjct: 279 VTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLL 338
Query: 512 VFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMF 571
+ FL +GI+IF+SLV++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G
Sbjct: 339 ILFLAMGIMIFSSLVFFAEKDED--ATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKI 396
Query: 572 VGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 616
VG LC +AGVL IALP+P+IV+NF+ +Y Q R + KRR L
Sbjct: 397 VGGLCCIAGVLVIALPIPIIVNNFSEFYKE-QKRQEKAIKRREAL 440
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 351 SLVFFAEKDED--ATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 408
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 235
IALP+P+IV+NF+ +Y Q R + KRR L
Sbjct: 409 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREAL 440
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH ++C F +EL++WG+D E S + R Q+ + + L + E
Sbjct: 105 TGKLHMMEEMCALSFGQELDYWGID------EIYLESCCQARYHQKKEQMNEELRREAET 158
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
M + G E F ++ K LW L ++P SS +AK
Sbjct: 159 -----MREREGEE---FDNTCCPDKRKK--LWDLLEKPNSSVAAK 193
>sp|O18868|KCNB1_PIG Potassium voltage-gated channel subfamily B member 1 OS=Sus scrofa
GN=KCNB1 PE=2 SV=1
Length = 858
Score = 233 bits (594), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/297 (40%), Positives = 182/297 (61%), Gaps = 26/297 (8%)
Query: 334 KTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHN 393
+ + +LW L ++P SS +AKI+ ++S+ FI +S ++ L T P+++
Sbjct: 170 EKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQ-------------- 215
Query: 394 TSAWTLDK-TQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATL 452
+LD+ QT + ++E +C AWFT E L+RF+SSP+K +F K +N ID +A L
Sbjct: 216 ----SLDEFGQTTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAIL 271
Query: 453 SFYIDLLL---QKFASHLENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKEL 508
+Y+ + L K +N +++ F I+RI+R+ KL RHS+GL+ L T R S EL
Sbjct: 272 PYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNEL 331
Query: 509 TLLVFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYV 568
LL+ FL +GI+IF+SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +
Sbjct: 332 GLLILFLAMGIMIFSSLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLL 389
Query: 569 GMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 625
G VG LC +AGVL IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 390 GKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 347 SLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 404
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 244
IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 405 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TG+LH ++C F +EL++WG+D E S + R Q+ + ++ E
Sbjct: 101 TGRLHMMEEMCALSFSQELDYWGID------EIYLESCCQARYHQK------KEQMNEEL 148
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
+ E R+ EE F ++ K LW L ++P SS +AK
Sbjct: 149 KREAETLREREGEE--FDNTCCAEKRKK--LWDLLEKPNSSVAAK 189
>sp|Q14721|KCNB1_HUMAN Potassium voltage-gated channel subfamily B member 1 OS=Homo
sapiens GN=KCNB1 PE=1 SV=2
Length = 858
Score = 233 bits (593), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 182/297 (61%), Gaps = 26/297 (8%)
Query: 334 KTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHN 393
+ + +LW L ++P SS +AKI+ ++S+ FI +S ++ L T P+++
Sbjct: 170 EKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQ-------------- 215
Query: 394 TSAWTLDK-TQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATL 452
+LD+ Q+ + ++E +C AWFT E L+RF+SSP+K +F K +N ID +A L
Sbjct: 216 ----SLDEFGQSTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAIL 271
Query: 453 SFYIDLLL---QKFASHLENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKEL 508
+Y+ + L K +N +++ F I+RI+R+ KL RHS+GL+ L T R S EL
Sbjct: 272 PYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNEL 331
Query: 509 TLLVFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYV 568
LL+ FL +GI+IF+SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +
Sbjct: 332 GLLILFLAMGIMIFSSLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLL 389
Query: 569 GMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 625
G VG LC +AGVL IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 390 GKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 347 SLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 404
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 244
IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 405 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TG+LH ++C F +EL++WG+D E S + R Q+ + ++ E
Sbjct: 101 TGRLHMMEEMCALSFSQELDYWGID------EIYLESCCQARYHQK------KEQMNEEL 148
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
+ E R+ EE F ++ K LW L ++P SS +AK
Sbjct: 149 KREAETLREREGEE--FDNTCCAEKRKK--LWDLLEKPNSSVAAK 189
>sp|Q7T199|KCA10_CHICK Potassium voltage-gated channel subfamily A member 10 OS=Gallus
gallus GN=KCNA10 PE=2 SV=1
Length = 516
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 205/354 (57%), Gaps = 20/354 (5%)
Query: 274 GIPSSVSSGNMNRRMNPAKANNPKEMMGPKMDTEKPSDEEMARKFGFEEAYFKG--RLSW 331
GI SG RR AN P ++ ++ + DE M +F +E + K L
Sbjct: 145 GILYYYQSGGKIRR----PANVPIDVFADEITFYELGDEAMD-QFREDEGFIKDPETLLP 199
Query: 332 WQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTT 391
Q W LF+ P SS++A+ + +VSV I ISI+ FC++T P+ R + T +
Sbjct: 200 TNDFHRQFWLLFEYPESSSAARGVALVSVLVIVISIIIFCMETLPEFREEREYKSTQELS 259
Query: 392 HNTSAWTLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIAT 451
NT+ L + D FF IE C WF+FE+ +RFI P K EF K +N+ID ++
Sbjct: 260 KNTTDTLL--AHSTFTDPFFVIETACIIWFSFELFVRFIVCPSKTEFFKNIMNIIDIVSI 317
Query: 452 LSFYIDLLLQKFASHLENAD------ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASA 505
+ +++ L + N IL ++R+ R+FKL+RHS GL+IL QT +AS
Sbjct: 318 IPYFVTLTTELIQQSELNGQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASM 377
Query: 506 KELTLLVFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPK 565
+EL LL+FFL +G+++F+S VY+AE + P + F+SIP G WWA+VTMTTVGYGDM P
Sbjct: 378 RELGLLIFFLFIGVILFSSAVYFAEVDE--PQSHFSSIPDGFWWAVVTMTTVGYGDMCPT 435
Query: 566 TYVGMFVGALCALAGVLTIALPVPVIVSNFAMYY---SHTQARAKLPKKRRRVL 616
T G VG LCA+AGVLTIALPVPVIVSNF +Y + + + LP + R+L
Sbjct: 436 TLGGKIVGTLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEKQILPGEVERIL 489
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 5/96 (5%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + P + F+SIP G WWA+VTMTTVGYGDM P T G VG LCA+AGVLT
Sbjct: 396 SAVYFAEVDE--PQSHFSSIPDGFWWAVVTMTTVGYGDMCPTTLGGKIVGTLCAIAGVLT 453
Query: 203 IALPVPVIVSNFAMYY---SHTQARAKLPKKRRRVL 235
IALPVPVIVSNF +Y + + + LP + R+L
Sbjct: 454 IALPVPVIVSNFNYFYHRETENEEKQILPGEVERIL 489
>sp|P15387|KCNB1_RAT Potassium voltage-gated channel subfamily B member 1 OS=Rattus
norvegicus GN=Kcnb1 PE=1 SV=3
Length = 857
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 182/297 (61%), Gaps = 26/297 (8%)
Query: 334 KTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHN 393
+ + +LW L ++P SS +AKI+ ++S+ FI +S ++ L T P+++
Sbjct: 170 EKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQ-------------- 215
Query: 394 TSAWTLDK-TQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATL 452
+LD+ Q+ + ++E +C AWFT E L+RF+SSP+K +F K +N ID +A L
Sbjct: 216 ----SLDEFGQSTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAIL 271
Query: 453 SFYIDLLL---QKFASHLENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKEL 508
+Y+ + L K +N +++ F I+RI+R+ KL RHS+GL+ L T R S EL
Sbjct: 272 PYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNEL 331
Query: 509 TLLVFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYV 568
LL+ FL +GI+IF+SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +
Sbjct: 332 GLLILFLAMGIMIFSSLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLL 389
Query: 569 GMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 625
G VG LC +AGVL IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 390 GKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 347 SLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 404
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 244
IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 405 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TG+LH ++C F +EL++WG+D E S + R Q+ + ++ E
Sbjct: 101 TGRLHMMEEMCALSFSQELDYWGID------EIYLESCCQARYHQK------KEQMNEEL 148
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
+ E R+ EE F ++ K LW L ++P SS +AK
Sbjct: 149 KREAETLREREGEE--FDNTCCAEKRKK--LWDLLEKPNSSVAAK 189
>sp|Q03717|KCNB1_MOUSE Potassium voltage-gated channel subfamily B member 1 OS=Mus
musculus GN=Kcnb1 PE=1 SV=2
Length = 857
Score = 232 bits (592), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 182/297 (61%), Gaps = 26/297 (8%)
Query: 334 KTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHN 393
+ + +LW L ++P SS +AKI+ ++S+ FI +S ++ L T P+++
Sbjct: 170 EKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQ-------------- 215
Query: 394 TSAWTLDK-TQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATL 452
+LD+ Q+ + ++E +C AWFT E L+RF+SSP+K +F K +N ID +A L
Sbjct: 216 ----SLDEFGQSTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAIL 271
Query: 453 SFYIDLLL---QKFASHLENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKEL 508
+Y+ + L K +N +++ F I+RI+R+ KL RHS+GL+ L T R S EL
Sbjct: 272 PYYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNEL 331
Query: 509 TLLVFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYV 568
LL+ FL +GI+IF+SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +
Sbjct: 332 GLLILFLAMGIMIFSSLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLL 389
Query: 569 GMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 625
G VG LC +AGVL IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 390 GKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 347 SLVFFAEKDEDD--TKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 404
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 244
IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 405 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 445
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TG+LH ++C F +EL++WG+D E S + R Q+ + ++ E
Sbjct: 101 TGRLHMMEEMCALSFSQELDYWGID------EIYLESCCQARYHQK------KEQMNEEL 148
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
+ E R+ EE F ++ K LW L ++P SS +AK
Sbjct: 149 KREAETLREREGEE--FDNTCCAEKRKK--LWDLLEKPNSSVAAK 189
>sp|Q4ZHA6|KCNB2_BOVIN Potassium voltage-gated channel subfamily B member 2 OS=Bos taurus
GN=KCNB2 PE=2 SV=1
Length = 911
Score = 232 bits (591), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 132/331 (39%), Positives = 192/331 (58%), Gaps = 34/331 (10%)
Query: 291 AKANNPKEMMGPKMDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSN 350
A+ + KE M ++ E E M + G E F ++ K LW L ++P SS
Sbjct: 139 ARYHQKKEQMNEELRREA---ETMREREGEE---FDNTCCPEKRKK--LWDLLEKPNSSV 190
Query: 351 SAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDK-TQTNAHDA 409
+AKI+ +VS+ FI +S ++ L T P+++ +D+ Q N +
Sbjct: 191 AAKILAIVSILFIVLSTIALSLNTLPELQ------------------EMDEFGQPNDNPQ 232
Query: 410 FFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLL---QKFASH 466
++E +C AWFT E L+RF+SSP K +F K +NVID +A L +Y+ + L K
Sbjct: 233 LAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQ 292
Query: 467 LENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASL 525
+N +++ F I+RI+R+ KL RHS+GL+ L T R S EL LL+ FL +GI+IF+SL
Sbjct: 293 FQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSL 352
Query: 526 VYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIA 585
V++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IA
Sbjct: 353 VFFAEKDED--ATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIA 410
Query: 586 LPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 616
LP+P+IV+NF+ +Y Q R + KRR L
Sbjct: 411 LPIPIIVNNFSEFYKE-QKRQEKAIKRREAL 440
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 351 SLVFFAEKDED--ATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 408
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 235
IALP+P+IV+NF+ +Y Q R + KRR L
Sbjct: 409 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREAL 440
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH ++C F +EL++WG+D E S + R Q+ + + L + E
Sbjct: 105 TGKLHMMEEMCALSFGQELDYWGID------EIYLESCCQARYHQKKEQMNEELRREAET 158
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
M + G E F + + + +LW L ++P SS +AK
Sbjct: 159 -----MREREGEE---FDN--TCCPEKRKKLWDLLEKPNSSVAAK 193
>sp|Q95L11|KCNB2_RABIT Potassium voltage-gated channel subfamily B member 2 OS=Oryctolagus
cuniculus GN=KCNB2 PE=2 SV=1
Length = 911
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 194/339 (57%), Gaps = 32/339 (9%)
Query: 291 AKANNPKEMMGPKMDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSN 350
A+ + KE M ++ E E M + G E F ++ K LW L ++P SS
Sbjct: 139 ARYHQKKEQMNEELRREA---ETMREREGEE---FDNTCCPEKRKK--LWDLLEKPNSSV 190
Query: 351 SAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAF 410
+AKI+ +VS+ FI +S ++ L T P+++ T + Q + +
Sbjct: 191 AAKILAIVSILFIVLSTIALSLNTLPELQ-----------------ETDEFGQPSDNPKL 233
Query: 411 FYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLL---QKFASHL 467
++E +C AWFT E L+RF+SSP K +F K +NVID +A L +Y+ + L K
Sbjct: 234 AHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQF 293
Query: 468 ENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLV 526
+N +++ F I+RI+R+ KL RHS+GL+ L T R S EL LL+ FL +GI+IF+SLV
Sbjct: 294 QNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLV 353
Query: 527 YYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIAL 586
++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IAL
Sbjct: 354 FFAEKDEDA--TKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIAL 411
Query: 587 PVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 625
P+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 412 PIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 449
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 351 SLVFFAEKDEDA--TKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 408
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRGPM 244
IALP+P+IV+NF+ +Y Q R + KRR L + G +
Sbjct: 409 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREALERAKRNGSI 449
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH ++C F +EL++WG+D E S + R Q+ + + L + E
Sbjct: 105 TGKLHMMEEMCALSFGQELDYWGID------EIYLESCCQARYHQKKEQMNEELRREAET 158
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
M + G E F ++ K LW L ++P SS +AK
Sbjct: 159 -----MREREGEE---FDNTCCPEKRKK--LWDLLEKPNSSVAAK 193
>sp|P15385|KCNA4_RAT Potassium voltage-gated channel subfamily A member 4 OS=Rattus
norvegicus GN=Kcna4 PE=1 SV=1
Length = 655
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 21/307 (6%)
Query: 312 EEMARKFGFEEAYFK---GRLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISIL 368
EE KF +E + + R + K Q+W LF+ P SS+ A+ I +VSV I ISI+
Sbjct: 265 EEALLKFREDEGFVREEEDRALPENEFKKQIWLLFEYPESSSPARGIAIVSVLVILISIV 324
Query: 369 SFCLKTHPDMR--VPVIHNITV----RTTHNTSAWTLDKT-QTNAHDAFFYIECLCNAWF 421
FCL+T P+ R +I ++ R ++TSA L+ + T +D FF +E +C WF
Sbjct: 325 IFCLETLPEFRDDRDLIMALSAGGHSRLLNDTSAPHLENSGHTIFNDPFFIVETVCIVWF 384
Query: 422 TFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDL---------LLQKFASHLENADI 472
+FE ++R + P + F K +N+ID ++ L ++I L + I
Sbjct: 385 SFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAI 444
Query: 473 LEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI 532
L ++R+ R+FKL+RHS GL+IL T RAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 445 LRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEAD 504
Query: 533 QANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIV 592
+ H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIV
Sbjct: 505 EPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIV 562
Query: 593 SNFAMYY 599
SNF +Y
Sbjct: 563 SNFNYFY 569
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 496 SAVYFAEADEPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLT 553
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 554 IALPVPVIVSNFNYFY 569
>sp|Q61423|KCNA4_MOUSE Potassium voltage-gated channel subfamily A member 4 OS=Mus
musculus GN=Kcna4 PE=1 SV=2
Length = 654
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 21/307 (6%)
Query: 312 EEMARKFGFEEAYFK---GRLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISIL 368
EE KF +E + + R + K Q+W LF+ P SS+ A+ I +VSV I ISI+
Sbjct: 264 EEALLKFREDEGFVREEEDRALPENEFKKQIWLLFEYPESSSPARGIAIVSVLVILISIV 323
Query: 369 SFCLKTHPDMR--VPVIHNITV----RTTHNTSAWTLDKT-QTNAHDAFFYIECLCNAWF 421
FCL+T P+ R +I ++ R ++TSA L+ + T +D FF +E +C WF
Sbjct: 324 IFCLETLPEFRDDRDLIMALSAGGHSRLLNDTSAPHLENSGHTIFNDPFFIVETVCIVWF 383
Query: 422 TFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDL---------LLQKFASHLENADI 472
+FE ++R + P + F K +N+ID ++ L ++I L + I
Sbjct: 384 SFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAI 443
Query: 473 LEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI 532
L ++R+ R+FKL+RHS GL+IL T RAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 444 LRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEAD 503
Query: 533 QANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIV 592
+ H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIV
Sbjct: 504 EPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIV 561
Query: 593 SNFAMYY 599
SNF +Y
Sbjct: 562 SNFNYFY 568
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 495 SAVYFAEADEPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLT 552
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 553 IALPVPVIVSNFNYFY 568
>sp|Q63099|KCNB2_RAT Potassium voltage-gated channel subfamily B member 2 OS=Rattus
norvegicus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 175/287 (60%), Gaps = 24/287 (8%)
Query: 334 KTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHN 393
+ + +LW L ++P SS +AKI+ +VS+ FI +S ++ L T P+++
Sbjct: 174 EKRKKLWDLLEKPNSSVAAKILAIVSILFIVLSTIALSLNTLPELQ-------------- 219
Query: 394 TSAWTLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLS 453
+ Q + + ++E +C AWFT E L+RF+SSP K +F K +NVID +A L
Sbjct: 220 ---ENDEFGQPSDNRKLAHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILP 276
Query: 454 FYIDLLL---QKFASHLENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELT 509
+Y+ + L K +N +++ F I+RI+R+ KL RHS+GL+ L T R S EL
Sbjct: 277 YYVTIFLTESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELG 336
Query: 510 LLVFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVG 569
LL+ FL +GI+IF+SLV++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G
Sbjct: 337 LLILFLAMGIMIFSSLVFFAEKDED--ATKFTSIPASFWWATITMTTVGYGDIYPKTLLG 394
Query: 570 MFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 616
VG LC +AGVL IALP+P+IV+NF+ +Y Q R + KRR L
Sbjct: 395 KIVGGLCCIAGVLVIALPIPIIVNNFSEFYKE-QKRQEKAIKRREAL 440
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 351 SLVFFAEKDED--ATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 408
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 235
IALP+P+IV+NF+ +Y Q R + KRR L
Sbjct: 409 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREAL 440
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH ++C F +EL++WG+D E S + R Q+ + + L + E
Sbjct: 105 TGKLHMMEEMCALSFGQELDYWGID------EIYLESCCQARYHQKKEQMNEELRREAET 158
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
D E +F + + + +LW L ++P SS +AK
Sbjct: 159 MRDGE-GEEFDN---------TCCPEKRKKLWDLLEKPNSSVAAK 193
>sp|A6H8H5|KCNB2_MOUSE Potassium voltage-gated channel subfamily B member 2 OS=Mus
musculus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 130/330 (39%), Positives = 190/330 (57%), Gaps = 32/330 (9%)
Query: 291 AKANNPKEMMGPKMDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSN 350
A+ + KE M ++ E E M + G E F ++ K LW L ++P SS
Sbjct: 139 ARYHQKKEQMNEELRREA---ETMREREGEE---FDNTCCPEKRKK--LWDLLEKPNSSV 190
Query: 351 SAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAF 410
+AKI+ +VS+ FI +S ++ L T P+++ + Q + +
Sbjct: 191 AAKILAIVSILFIVLSTIALSLNTLPELQ-----------------ENDEFGQPSDNRKL 233
Query: 411 FYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLL---QKFASHL 467
++E +C AWFT E L+RF+SSP K +F K +NVID +A L +Y+ + L K
Sbjct: 234 AHVEAVCIAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVLQF 293
Query: 468 ENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLV 526
+N +++ F I+RI+R+ KL RHS+GL+ L T R S EL LL+ FL +GI+IF+SLV
Sbjct: 294 QNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLV 353
Query: 527 YYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIAL 586
++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL IAL
Sbjct: 354 FFAEKDEDA--TKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIAL 411
Query: 587 PVPVIVSNFAMYYSHTQARAKLPKKRRRVL 616
P+P+IV+NF+ +Y Q R + KRR L
Sbjct: 412 PIPIIVNNFSEFYKE-QKRQEKAIKRREAL 440
Score = 102 bits (255), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ + F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 351 SLVFFAEKDEDA--TKFTSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLV 408
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 235
IALP+P+IV+NF+ +Y Q R + KRR L
Sbjct: 409 IALPIPIIVNNFSEFYKE-QKRQEKAIKRREAL 440
Score = 37.0 bits (84), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH ++C F +EL++WG+D E S + R Q+ + + L + E
Sbjct: 105 TGKLHMMEEMCALSFGQELDYWGID------EIYLESCCQARYHQKKEQMNEELRREAET 158
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
M + G E F ++ K LW L ++P SS +AK
Sbjct: 159 -----MREREGEE---FDNTCCPEKRKK--LWDLLEKPNSSVAAK 193
>sp|P50638|KCNA5_RABIT Potassium voltage-gated channel subfamily A member 5 OS=Oryctolagus
cuniculus GN=KCNA5 PE=2 SV=1
Length = 598
Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 185/324 (57%), Gaps = 41/324 (12%)
Query: 311 DEEMARKFGFEEAYFKGRLSWWQKT--KPQLWSLFDEPYSSNSAKIIGVVSVFFICISIL 368
DE M R F +E + K + + Q+W +F+ P SS SA+ I +VSV I ISI+
Sbjct: 191 DEAMER-FREDEGFIKDEEKPLPRNEFQRQVWLIFEYPESSGSARAIAIVSVLVILISII 249
Query: 369 SFCLKTHPDMRV--------PVIHN-------------ITVRTTHNTSAWTLDKTQTNAH 407
+FCL+T P+ + PV H + +T A L +T
Sbjct: 250 TFCLETLPEFKDERELLRHPPVPHQPPAAPALGANGSGAVAPASGSTVAPLLPRTLA--- 306
Query: 408 DAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQ------ 461
D FF +E C WFTFE+L+RF + P K EF + +N+ID +A ++I L +
Sbjct: 307 DPFFIVETTCVIWFTFELLVRFFACPSKAEFSRNIMNIIDIVAIFPYFITLGTELAEQQP 366
Query: 462 ------KFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFL 515
+ + IL ++R+ R+FKL+RHS GL+IL +T +AS +EL LL+FFL
Sbjct: 367 GGGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFL 426
Query: 516 VLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGAL 575
+G+++F+S VY+AE H F+SIP WWA+VTMTTVGYGDM P T G VG+L
Sbjct: 427 FIGVILFSSAVYFAEADNQGTH--FSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSL 484
Query: 576 CALAGVLTIALPVPVIVSNFAMYY 599
CA+AGVLTIALPVPVIVSNF +Y
Sbjct: 485 CAIAGVLTIALPVPVIVSNFNYFY 508
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE H F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 435 SAVYFAEADNQGTH--FSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLT 492
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 493 IALPVPVIVSNFNYFY 508
>sp|P19024|KCNA5_RAT Potassium voltage-gated channel subfamily A member 5 OS=Rattus
norvegicus GN=Kcna5 PE=1 SV=1
Length = 602
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 186/324 (57%), Gaps = 44/324 (13%)
Query: 311 DEEMARKFGFEEAYFKGRLSWWQKTKP--------QLWSLFDEPYSSNSAKIIGVVSVFF 362
DE M R F +E + K ++ KP Q+W +F+ P SS SA+ I +VSV
Sbjct: 198 DEAMER-FREDEGFIK------EEEKPLPRNEFQRQVWLIFEYPESSGSARAIAIVSVLV 250
Query: 363 ICISILSFCLKTHPDMR--VPVIHNITVRTTHNTSAWTLDKTQTNA-------------- 406
I ISI++FCL+T P+ R ++ + V A ++ + + A
Sbjct: 251 ILISIITFCLETLPEFRDERELLRHPPVPPQPPAPAPGINGSVSGALSSGPTVAPLLPRT 310
Query: 407 -HDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDL------- 458
D FF +E C WFTFE+L+RF + P K EF + +N+ID +A ++I L
Sbjct: 311 LADPFFIVETTCVIWFTFELLVRFFACPSKAEFSRNIMNIIDVVAIFPYFITLGTELAEQ 370
Query: 459 ---LLQKFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFL 515
+ + IL ++R+ R+FKL+RHS GL+IL +T +AS +EL LL+FFL
Sbjct: 371 QPGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFL 430
Query: 516 VLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGAL 575
+G+++F+S VY+AE H F+SIP WWA+VTMTTVGYGDM P T G VG+L
Sbjct: 431 FIGVILFSSAVYFAEADNHGSH--FSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSL 488
Query: 576 CALAGVLTIALPVPVIVSNFAMYY 599
CA+AGVLTIALPVPVIVSNF +Y
Sbjct: 489 CAIAGVLTIALPVPVIVSNFNYFY 512
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE H F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 439 SAVYFAEADNHGSH--FSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLT 496
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 497 IALPVPVIVSNFNYFY 512
>sp|P79197|KCNA5_MUSPF Potassium voltage-gated channel subfamily A member 5 OS=Mustela
putorius furo GN=KCNA5 PE=2 SV=1
Length = 601
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 185/325 (56%), Gaps = 45/325 (13%)
Query: 311 DEEMARKFGFEEAYFKGRLSWWQKTKP--------QLWSLFDEPYSSNSAKIIGVVSVFF 362
DE M R F +E + K ++ KP Q+W +F+ P SS SA+ I +VSV
Sbjct: 196 DEAMER-FREDEGFIK------EEEKPLPRNEFQRQVWLIFEYPESSGSARGIAIVSVLV 248
Query: 363 ICISILSFCLKTHPDMRV--------PVIHNIT--VRTTHNTSAWTLDKTQTNA------ 406
I ISI++FCL+T P+ R PV H R + + T A
Sbjct: 249 ILISIITFCLETLPEFRDERELLRHPPVPHQPLGPSRGANGSGPLAPPSGPTVAPLLPRT 308
Query: 407 -HDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQ---- 461
D FF +E C WFTFE+L+RF + P K EF + +N+ID +A ++I L +
Sbjct: 309 LADPFFIVETTCVIWFTFELLVRFFACPSKAEFSRNIMNIIDVVAIFPYFITLGTELAEQ 368
Query: 462 -------KFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFF 514
+ + IL ++R+ R+FKL+RHS GL+IL +T +AS +EL LL+FF
Sbjct: 369 PGGGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFF 428
Query: 515 LVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGA 574
L +G+++F+S VY+AE N F+SIP WWA+VTMTTVGYGDM P T G VG+
Sbjct: 429 LFIGVILFSSAVYFAE--ADNQETHFSSIPDAFWWAVVTMTTVGYGDMRPVTVGGKIVGS 486
Query: 575 LCALAGVLTIALPVPVIVSNFAMYY 599
LCA+AGVLTIALPVPVIVSNF +Y
Sbjct: 487 LCAIAGVLTIALPVPVIVSNFNYFY 511
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE N F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 438 SAVYFAE--ADNQETHFSSIPDAFWWAVVTMTTVGYGDMRPVTVGGKIVGSLCAIAGVLT 495
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 496 IALPVPVIVSNFNYFY 511
>sp|P22459|KCNA4_HUMAN Potassium voltage-gated channel subfamily A member 4 OS=Homo
sapiens GN=KCNA4 PE=1 SV=2
Length = 653
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 182/307 (59%), Gaps = 21/307 (6%)
Query: 312 EEMARKFGFEEAYFK---GRLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISIL 368
EE KF +E + + R + K Q+W LF+ P SS+ A+ I +VSV I ISI+
Sbjct: 263 EEALLKFREDEGFVREEEDRALPENEFKKQIWLLFEYPESSSPARGIAIVSVLVILISIV 322
Query: 369 SFCLKTHPDMRVPVIHNITVRT------THNTSAWTLDKT-QTNAHDAFFYIECLCNAWF 421
FCL+T P+ R + + ++TSA L+ + T +D FF +E +C WF
Sbjct: 323 IFCLETLPEFRDDRDLVMALSAGGHGGLLNDTSAPHLENSGHTIFNDPFFIVETVCIVWF 382
Query: 422 TFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDL---------LLQKFASHLENADI 472
+FE ++R + P + F K +N+ID ++ L ++I L + I
Sbjct: 383 SFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAI 442
Query: 473 LEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI 532
L ++R+ R+FKL+RHS GL+IL T RAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 443 LRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEAD 502
Query: 533 QANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIV 592
+ H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIV
Sbjct: 503 EPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIV 560
Query: 593 SNFAMYY 599
SNF +Y
Sbjct: 561 SNFNYFY 567
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 494 SAVYFAEADEPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLT 551
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 552 IALPVPVIVSNFNYFY 567
>sp|Q28527|KCNA4_MUSPF Potassium voltage-gated channel subfamily A member 4 OS=Mustela
putorius furo GN=KCNA4 PE=2 SV=1
Length = 654
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 184/307 (59%), Gaps = 21/307 (6%)
Query: 312 EEMARKFGFEEAYFK---GRLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISIL 368
EE KF +E + + R + K Q+W LF+ P SS+ A+ I +VSV I ISI+
Sbjct: 264 EEALLKFREDEGFVREEEDRALPENEFKKQIWLLFEYPESSSPARGIAIVSVLVILISIV 323
Query: 369 SFCLKTHPDMR--VPVIHNITVR----TTHNTSAWTLDKT-QTNAHDAFFYIECLCNAWF 421
FCL+T P+ R +I ++ ++TSA L+ + T +D FF +E +C WF
Sbjct: 324 IFCLETLPEFRDDRDLIMALSAGGHSGLLNDTSAPHLENSGHTIFNDPFFIVETVCIVWF 383
Query: 422 TFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDL---------LLQKFASHLENADI 472
+FE ++R + P + F K +N+ID ++ L ++I L + I
Sbjct: 384 SFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAI 443
Query: 473 LEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI 532
L ++R+ R+FKL+RHS GL+IL T RAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 444 LRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEAD 503
Query: 533 QANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIV 592
+ H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIV
Sbjct: 504 EPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIV 561
Query: 593 SNFAMYY 599
SNF +Y
Sbjct: 562 SNFNYFY 568
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 495 SAVYFAEADEPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLT 552
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 553 IALPVPVIVSNFNYFY 568
>sp|Q61762|KCNA5_MOUSE Potassium voltage-gated channel subfamily A member 5 OS=Mus
musculus GN=Kcna5 PE=2 SV=2
Length = 602
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 183/327 (55%), Gaps = 50/327 (15%)
Query: 311 DEEMARKFGFEEAYFKGRLSWWQKTKP--------QLWSLFDEPYSSNSAKIIGVVSVFF 362
DE M R F +E + K ++ KP Q+W +F+ P SS SA+ I +VSV
Sbjct: 198 DEAMER-FREDEGFIK------EEEKPLPRNEFQRQVWLIFEYPESSGSARAIAIVSVLV 250
Query: 363 ICISILSFCLKTHP---DMRVPVIHNITVRTTHN-----------------TSAWTLDKT 402
I ISI++FCL+T P D R + H T A L +T
Sbjct: 251 ILISIITFCLETLPEFRDERELLRHPPVPPQPPAPAPGANGSGSGVLSSGPTVAPLLPRT 310
Query: 403 QTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDL---- 458
D FF +E C WFTFE+L+RF + P K EF + +N+ID +A ++I L
Sbjct: 311 LA---DPFFIVETTCVIWFTFELLVRFFACPSKAEFSRNIMNIIDIVAIFPYFITLGTEL 367
Query: 459 ------LLQKFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLV 512
+ + IL ++R+ R+FKL+RHS GL+IL +T +AS +EL LL+
Sbjct: 368 AEQQPGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLI 427
Query: 513 FFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFV 572
FFL +G+++F+S VY+AE H F+SIP WWA+VTMTTVGYGDM P T G V
Sbjct: 428 FFLFIGVILFSSAVYFAEADNQGSH--FSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIV 485
Query: 573 GALCALAGVLTIALPVPVIVSNFAMYY 599
G+LCA+AGVLTIALPVPVIVSNF +Y
Sbjct: 486 GSLCAIAGVLTIALPVPVIVSNFNYFY 512
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE H F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 439 SAVYFAEADNQGSH--FSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLT 496
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 497 IALPVPVIVSNFNYFY 512
>sp|Q05037|KCNA4_BOVIN Potassium voltage-gated channel subfamily A member 4 OS=Bos taurus
GN=KCNA4 PE=2 SV=1
Length = 660
Score = 225 bits (573), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 182/307 (59%), Gaps = 21/307 (6%)
Query: 312 EEMARKFGFEEAYFK---GRLSWWQKTKPQLWSLFDEPYSSNSAKIIGVVSVFFICISIL 368
EE KF +E + + R + K Q+W LF+ P SS+ A+ I +VSV I ISI+
Sbjct: 271 EEALLKFREDEGFVREEEDRALPENEFKKQIWLLFEYPESSSPARGIAIVSVLVILISIV 330
Query: 369 SFCLKTHPDMRVPVIHNITVRT------THNTSAWTLDKT-QTNAHDAFFYIECLCNAWF 421
FCL+T P+ R + + T ++TSA + + T +D FF +E +C WF
Sbjct: 331 IFCLETLPEFRDDRDLIMALSTGGHGGLLNDTSAPHPENSGHTIFNDPFFIVETVCIVWF 390
Query: 422 TFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDL---------LLQKFASHLENADI 472
+FE ++R + P + F K +N+ID ++ L ++I L + I
Sbjct: 391 SFEFVVRCFACPSQALFFKNIMNIIDIVSILPYFITLGTDLAQQQGGGNGQQQQAMSFAI 450
Query: 473 LEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLVYYAERI 532
L ++R+ R+FKL+RHS GL+IL T RAS +EL LL+FFL +G+++F+S VY+AE
Sbjct: 451 LRIIRLVRVFRIFKLSRHSKGLQILGHTLRASMRELGLLIFFLFIGVILFSSAVYFAEAD 510
Query: 533 QANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIALPVPVIV 592
+ H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLTIALPVPVIV
Sbjct: 511 EPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLTIALPVPVIV 568
Query: 593 SNFAMYY 599
SNF +Y
Sbjct: 569 SNFNYFY 575
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE + H F SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 502 SAVYFAEADEPTTH--FQSIPDAFWWAVVTMTTVGYGDMKPITVGGKIVGSLCAIAGVLT 559
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 560 IALPVPVIVSNFNYFY 575
>sp|P22739|KCNA2_XENLA Potassium voltage-gated channel subfamily A member 2 OS=Xenopus
laevis GN=kcna2 PE=3 SV=2
Length = 499
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/279 (44%), Positives = 172/279 (61%), Gaps = 22/279 (7%)
Query: 336 KPQLWSLFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVR------ 389
+ Q+W LF+ P SS A+II ++SV I ISI+SFCL+T P R N +
Sbjct: 146 QKQVWLLFEYPESSGPARIIAIISVTVILISIVSFCLETLPVFRD---ENEDMHGSGGNY 202
Query: 390 TTHNTSAWTLDKTQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYI 449
++ S K+ T D FF +E LC WF+FE L+RF++ P K F +N+ID +
Sbjct: 203 YSYPNSTVRFQKSNTFT-DPFFIVETLCIIWFSFEFLVRFLACPSKAVFFTNLMNIIDIV 261
Query: 450 ATLSFYIDLLLQKFASHLENAD---------ILEFFSIIRIMRLFKLTRHSSGLKILMQT 500
A + ++I L + A E+ IL ++R+ R+FKL+RHS GL+IL QT
Sbjct: 262 AIIPYFITLGTE-LAEKTEDGQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQT 320
Query: 501 FRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYG 560
AS +EL LL+FFL +G+++F+S V++AE + + F SIP WWA+V+MTTVGYG
Sbjct: 321 LNASMRELGLLIFFLFIGVILFSSAVFFAEADERDSQ--FPSIPDAFWWAVVSMTTVGYG 378
Query: 561 DMAPKTYVGMFVGALCALAGVLTIALPVPVIVSNFAMYY 599
DM P T G VG+LCA+AGVLTIALPVPVIVSNF +Y
Sbjct: 379 DMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY 417
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S V++AE + + F SIP WWA+V+MTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 344 SAVFFAEADERDSQ--FPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLT 401
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 402 IALPVPVIVSNFNYFY 417
>sp|P22460|KCNA5_HUMAN Potassium voltage-gated channel subfamily A member 5 OS=Homo
sapiens GN=KCNA5 PE=1 SV=4
Length = 613
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 182/326 (55%), Gaps = 46/326 (14%)
Query: 311 DEEMARKFGFEEAYFKGRLSWWQKTKP--------QLWSLFDEPYSSNSAKIIGVVSVFF 362
DE M R F +E + K ++ KP Q+W +F+ P SS SA+ I +VSV
Sbjct: 207 DEAMER-FREDEGFIK------EEEKPLPRNEFQRQVWLIFEYPESSGSARAIAIVSVLV 259
Query: 363 ICISILSFCLKTHPDMR--VPVIHNITVRTTHNTSAWTLDKTQTNA-------------- 406
I ISI++FCL+T P+ R ++ + A + + A
Sbjct: 260 ILISIITFCLETLPEFRDERELLRHPPAPHQPPAPAPGANGSGVMAPPSGPTVAPLLPRT 319
Query: 407 -HDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDL------- 458
D FF +E C WFTFE+L+RF + P K F + +N+ID +A ++I L
Sbjct: 320 LADPFFIVETTCVIWFTFELLVRFFACPSKAGFSRNIMNIIDVVAIFPYFITLGTELAEQ 379
Query: 459 -----LLQKFASHLENADILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVF 513
+ + IL ++R+ R+FKL+RHS GL+IL +T +AS +EL LL+F
Sbjct: 380 QPGGGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIF 439
Query: 514 FLVLGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVG 573
FL +G+++F+S VY+AE H F+SIP WWA+VTMTTVGYGDM P T G VG
Sbjct: 440 FLFIGVILFSSAVYFAEADNQGTH--FSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVG 497
Query: 574 ALCALAGVLTIALPVPVIVSNFAMYY 599
+LCA+AGVLTIALPVPVIVSNF +Y
Sbjct: 498 SLCAIAGVLTIALPVPVIVSNFNYFY 523
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/76 (65%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
S VY+AE H F+SIP WWA+VTMTTVGYGDM P T G VG+LCA+AGVLT
Sbjct: 450 SAVYFAEADNQGTH--FSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLT 507
Query: 203 IALPVPVIVSNFAMYY 218
IALPVPVIVSNF +Y
Sbjct: 508 IALPVPVIVSNFNYFY 523
>sp|Q95167|KCNB2_CANFA Potassium voltage-gated channel subfamily B member 2 (Fragment)
OS=Canis familiaris GN=KCNB2 PE=2 SV=2
Length = 809
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/280 (42%), Positives = 169/280 (60%), Gaps = 26/280 (9%)
Query: 342 LFDEPYSSNSAKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDK 401
L ++P SS +AKI+ +VS FI +S ++ L T P+++ +D+
Sbjct: 182 LLEKPNSSVAAKILAIVSNLFIVLSTIALSLNTLPELQ------------------EMDE 223
Query: 402 -TQTNAHDAFFYIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLL 460
Q N + ++E +CNAWFT E L+RF+SSP K +F K +NVID +A L +Y+ + L
Sbjct: 224 FGQPNDNPQLAHVEAVCNAWFTMEYLLRFLSSPNKWKFFKGPLNVIDLLAILPYYVTIFL 283
Query: 461 ---QKFASHLENAD-ILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLV 516
K +N +++ F I+RI+R+ KL RHS+GL+ L T R S EL LL+ FL
Sbjct: 284 TESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLA 343
Query: 517 LGIVIFASLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALC 576
+GI+IF+SLV++AE+ F SIP WWA +TMTTVGYGD+ PKT +G VG LC
Sbjct: 344 MGIMIFSSLVFFAEK--DADATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKSVGGLC 401
Query: 577 ALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 616
+AGVL IALP+P+IV F+ +Y Q R + KRR L
Sbjct: 402 CIAGVLVIALPIPIIVPPFSEFYKE-QKRQEKAIKRREAL 440
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SLV++AE+ F SIP WWA +TMTTVGYGD+ PKT +G VG LC +AGVL
Sbjct: 351 SLVFFAEK--DADATKFTSIPASFWWATITMTTVGYGDIYPKTLLGKSVGGLCCIAGVLV 408
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKRRRVL 235
IALP+P+IV F+ +Y Q R + KRR L
Sbjct: 409 IALPIPIIVPPFSEFYKE-QKRQEKAIKRREAL 440
>sp|P17970|KCNAB_DROME Potassium voltage-gated channel protein Shab OS=Drosophila
melanogaster GN=Shab PE=1 SV=2
Length = 985
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 186/326 (57%), Gaps = 37/326 (11%)
Query: 292 KANNPKEMMGPKMDTEKPSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNS 351
+ N E M + ++ + DEE +FG +G+ S +QK LW L ++P +S +
Sbjct: 386 RKENVHEEMRKEAESLRQRDEE---EFG------EGKFSEYQK---YLWELLEKPNTSFA 433
Query: 352 AKIIGVVSVFFICISILSFCLKTHPDMRVPVIHNITVRTTHNTSAWTLDKTQTNAHDAFF 411
A++I V+S+ FI +S ++ L T P ++ +D +
Sbjct: 434 ARVIAVISILFIVLSTIALTLNTLPQLQ------------------HIDNGTPQDNPQLA 475
Query: 412 YIECLCNAWFTFEILMRFISSPRKCEFIKASVNVIDYIATLSFYIDLLLQKFASHLENA- 470
+E +C WFT E ++RF +SP K +F K +N+ID +A L +++ L L + + +
Sbjct: 476 MVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQF 535
Query: 471 ----DILEFFSIIRIMRLFKLTRHSSGLKILMQTFRASAKELTLLVFFLVLGIVIFASLV 526
+++ F I+RI+R+ KL RHS+GL+ L T R S KEL LL+ FL +G++IF+SL
Sbjct: 536 QDVRRVVQVFRIMRILRVLKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLA 595
Query: 527 YYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLTIAL 586
Y+AE+ + + F SIP WWA +TMTTVGYGD+ P T +G +G +C + GVL +AL
Sbjct: 596 YFAEKDEKD--TKFVSIPEAFWWAGITMTTVGYGDICPTTALGKVIGTVCCICGVLVVAL 653
Query: 587 PVPVIVSNFAMYYSHTQARAKLPKKR 612
P+P+IV+NFA +Y + R K K+R
Sbjct: 654 PIPIIVNNFAEFYKNQMRREKALKRR 679
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 143 SLVYYAERIQANPHNDFNSIPLGLWWALVTMTTVGYGDMAPKTYVGMFVGALCALAGVLT 202
SL Y+AE+ + + F SIP WWA +TMTTVGYGD+ P T +G +G +C + GVL
Sbjct: 593 SLAYFAEKDEKD--TKFVSIPEAFWWAGITMTTVGYGDICPTTALGKVIGTVCCICGVLV 650
Query: 203 IALPVPVIVSNFAMYYSHTQARAKLPKKR 231
+ALP+P+IV+NFA +Y + R K K+R
Sbjct: 651 VALPIPIIVNNFAEFYKNQMRREKALKRR 679
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 16/105 (15%)
Query: 1 TGKLHYPTDVCGPLFEEELEFWGLDAPKYKIESNFRSIIKHRDTQETLAVLDRLDLDTEK 60
TGKLH ++C F ++LE+WG+D E S +H+ Q V + + + E
Sbjct: 347 TGKLHIVDEMCVLAFSDDLEYWGVD------ELYLESCCQHKYHQRKENVHEEMRKEAES 400
Query: 61 PSDEEMARKFGFEEAYFKGRLSWWQKTKPQLWSLFDEPYSSNSAK 105
+ EE + +G+ S +QK LW L ++P +S +A+
Sbjct: 401 LRQRD-------EEEFGEGKFSEYQK---YLWELLEKPNTSFAAR 435
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 285,831,599
Number of Sequences: 539616
Number of extensions: 13798681
Number of successful extensions: 97066
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 316
Number of HSP's that attempted gapping in prelim test: 83849
Number of HSP's gapped (non-prelim): 11037
length of query: 695
length of database: 191,569,459
effective HSP length: 125
effective length of query: 570
effective length of database: 124,117,459
effective search space: 70746951630
effective search space used: 70746951630
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)