BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13137
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17972|KCNAW_DROME Potassium voltage-gated channel protein Shaw OS=Drosophila
melanogaster GN=Shaw PE=2 SV=1
Length = 498
Score = 147 bits (372), Expect = 2e-35, Method: Composition-based stats.
Identities = 72/93 (77%), Positives = 77/93 (82%), Gaps = 4/93 (4%)
Query: 50 MNLLNMMDAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHP 109
MNL+NM D+ENRVVLNVGGIRHETYKATLKKIPATRLSRLTEAL NYDP+LNEYFFDRHP
Sbjct: 1 MNLINM-DSENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHP 59
Query: 110 GVFAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
GVFAQVLNYYR +L P VC + EL
Sbjct: 60 GVFAQVLNYYRTGKL---HYPTDVCGPLFEEEL 89
>sp|G5EFC3|KCNAG_CAEEL Potassium voltage-gated channel protein egl-36 OS=Caenorhabditis
elegans GN=egl-36 PE=1 SV=1
Length = 558
Score = 120 bits (301), Expect = 3e-27, Method: Composition-based stats.
Identities = 55/84 (65%), Positives = 65/84 (77%), Gaps = 3/84 (3%)
Query: 59 ENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNY 118
+ R+VLNVGG+RHETY+ATLKKIPATRLSRLT +L N+DP+LNEYFFDRHP VFA +LNY
Sbjct: 36 DERIVLNVGGVRHETYQATLKKIPATRLSRLTPSLANFDPLLNEYFFDRHPAVFAMILNY 95
Query: 119 YRVFRLPLGFKPWTVCMASYTSEL 142
YR +L P VC + EL
Sbjct: 96 YRTGKL---HYPTDVCGPLFEEEL 116
>sp|Q01956|KCNC3_RAT Potassium voltage-gated channel subfamily C member 3 OS=Rattus
norvegicus GN=Kcnc3 PE=2 SV=1
Length = 889
Score = 95.5 bits (236), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 7/86 (8%)
Query: 61 RVVLNVGGIRHETYKATLKKIPATRLSRLTE----ALGNYDPVLNEYFFDRHPGVFAQVL 116
++V+NVGG+RHETY++TL+ +P TRL+ LTE A +YDP +E+FFDRHPGVFA VL
Sbjct: 91 KIVINVGGVRHETYRSTLRTLPGTRLAGLTEPEAAARFDYDPGTDEFFFDRHPGVFAYVL 150
Query: 117 NYYRVFRLPLGFKPWTVCMASYTSEL 142
NYYR +L P VC + EL
Sbjct: 151 NYYRTGKLHC---PADVCGPLFEEEL 173
>sp|Q63959|KCNC3_MOUSE Potassium voltage-gated channel subfamily C member 3 OS=Mus
musculus GN=Kcnc3 PE=2 SV=2
Length = 769
Score = 95.5 bits (236), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 7/86 (8%)
Query: 61 RVVLNVGGIRHETYKATLKKIPATRLSRLTE----ALGNYDPVLNEYFFDRHPGVFAQVL 116
++V+NVGG+RHETY++TL+ +P TRL+ LTE A +YDP +E+FFDRHPGVFA VL
Sbjct: 90 KIVINVGGVRHETYRSTLRTLPGTRLAGLTEPEAAARFDYDPGTDEFFFDRHPGVFAYVL 149
Query: 117 NYYRVFRLPLGFKPWTVCMASYTSEL 142
NYYR +L P VC + EL
Sbjct: 150 NYYRTGKLHC---PADVCGPLFEEEL 172
>sp|Q14003|KCNC3_HUMAN Potassium voltage-gated channel subfamily C member 3 OS=Homo
sapiens GN=KCNC3 PE=1 SV=3
Length = 757
Score = 95.5 bits (236), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 7/86 (8%)
Query: 61 RVVLNVGGIRHETYKATLKKIPATRLSRLTE----ALGNYDPVLNEYFFDRHPGVFAQVL 116
++V+NVGG+RHETY++TL+ +P TRL+ LTE A +YDP +E+FFDRHPGVFA VL
Sbjct: 89 KIVINVGGVRHETYRSTLRTLPGTRLAGLTEPEAAARFDYDPGADEFFFDRHPGVFAYVL 148
Query: 117 NYYRVFRLPLGFKPWTVCMASYTSEL 142
NYYR +L P VC + EL
Sbjct: 149 NYYRTGKLHC---PADVCGPLFEEEL 171
>sp|P25122|KCNC1_RAT Potassium voltage-gated channel subfamily C member 1 OS=Rattus
norvegicus GN=Kcnc1 PE=2 SV=1
Length = 585
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALG----NYDPVLNEYFFDRHPGVF 112
D R+V+NVGG RH+TY++TL+ +P TRL+ L E +YDP +E+FFDRHPGVF
Sbjct: 5 DESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVF 64
Query: 113 AQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
A +LNYYR +L P VC Y EL
Sbjct: 65 AHILNYYRTGKLHC---PADVCGPLYEEEL 91
>sp|P15388|KCNC1_MOUSE Potassium voltage-gated channel subfamily C member 1 OS=Mus
musculus GN=Kcnc1 PE=2 SV=1
Length = 511
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALG----NYDPVLNEYFFDRHPGVF 112
D R+V+NVGG RH+TY++TL+ +P TRL+ L E +YDP +E+FFDRHPGVF
Sbjct: 5 DESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVF 64
Query: 113 AQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
A +LNYYR +L P VC Y EL
Sbjct: 65 AHILNYYRTGKLHC---PADVCGPLYEEEL 91
>sp|P48547|KCNC1_HUMAN Potassium voltage-gated channel subfamily C member 1 OS=Homo
sapiens GN=KCNC1 PE=2 SV=1
Length = 511
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/90 (50%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALG----NYDPVLNEYFFDRHPGVF 112
D R+V+NVGG RH+TY++TL+ +P TRL+ L E +YDP +E+FFDRHPGVF
Sbjct: 5 DESERIVINVGGTRHQTYRSTLRTLPGTRLAWLAEPDAHSHFDYDPRADEFFFDRHPGVF 64
Query: 113 AQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
A +LNYYR +L P VC Y EL
Sbjct: 65 AHILNYYRTGKLHC---PADVCGPLYEEEL 91
>sp|Q03721|KCNC4_HUMAN Potassium voltage-gated channel subfamily C member 4 OS=Homo
sapiens GN=KCNC4 PE=1 SV=2
Length = 635
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 18/101 (17%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLN--------------- 101
+A ++++NVGG RHETY++TL+ +P TRL+ L + G P +
Sbjct: 33 EASEKIIINVGGTRHETYRSTLRTLPGTRLAWLADPDGGGRPETDGGGVGSSGSSGGGGC 92
Query: 102 EYFFDRHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
E+FFDRHPGVFA VLNYYR +L P VC + EL
Sbjct: 93 EFFFDRHPGVFAYVLNYYRTGKLHC---PADVCGPLFEEEL 130
>sp|Q63734|KCNC4_RAT Potassium voltage-gated channel subfamily C member 4 OS=Rattus
norvegicus GN=Kcnc4 PE=1 SV=1
Length = 625
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLN--------------- 101
+A ++++NVGG RHETY++TL+ +P TRL+ L + G P +
Sbjct: 33 EASEKIIINVGGTRHETYRSTLRTLPGTRLAWLADPDGGGRPESDGGGAGSSGSSGGGGG 92
Query: 102 -EYFFDRHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
E+FFDRHPGVFA VLNYYR +L P VC + EL
Sbjct: 93 CEFFFDRHPGVFAYVLNYYRTGKLHC---PADVCGPLFEEEL 131
>sp|Q8R1C0|KCNC4_MOUSE Potassium voltage-gated channel subfamily C member 4 OS=Mus
musculus GN=Kcnc4 PE=2 SV=1
Length = 628
Score = 79.3 bits (194), Expect = 9e-15, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 22/105 (20%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLN--------------- 101
+A ++++NVGG RHETY++TL+ +P TRL+ L + G P +
Sbjct: 33 EASEKIIINVGGTRHETYRSTLRTLPGTRLAWLADPDGGGRPESDGGGAGSSGSSGGGGG 92
Query: 102 ----EYFFDRHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
E+FFDRHPGVFA VLNYYR +L P VC + EL
Sbjct: 93 GGGCEFFFDRHPGVFAYVLNYYRTGKLHC---PADVCGPLFEEEL 134
>sp|O18868|KCNB1_PIG Potassium voltage-gated channel subfamily B member 1 OS=Sus scrofa
GN=KCNB1 PE=2 SV=1
Length = 858
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 50 MNLLNMMDAENRVVLNVGGIRHETYKATLKKIPATRLSRLT---------EALGNYDPVL 100
M ++ RV LNVGG+ HE TL ++P TRL +L E +Y
Sbjct: 21 MEIVRSKACSRRVRLNVGGLAHEVLWRTLDRLPRTRLGKLRDCNTHDSLLEVCDDYSLDD 80
Query: 101 NEYFFDRHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
NEYFFDRHPG F +LN+YR RL + + +C S++ EL
Sbjct: 81 NEYFFDRHPGAFTSILNFYRTGRLHMMEE---MCALSFSQEL 119
>sp|P15387|KCNB1_RAT Potassium voltage-gated channel subfamily B member 1 OS=Rattus
norvegicus GN=Kcnb1 PE=1 SV=3
Length = 857
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 50 MNLLNMMDAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVL--------- 100
M ++ RV LNVGG+ HE TL ++P TRL +L + +D +L
Sbjct: 21 MEIVRSKACSRRVRLNVGGLAHEVLWRTLDRLPRTRLGKLRDC-NTHDSLLQVCDDYSLE 79
Query: 101 -NEYFFDRHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
NEYFFDRHPG F +LN+YR RL + + +C S++ EL
Sbjct: 80 DNEYFFDRHPGAFTSILNFYRTGRLHMMEE---MCALSFSQEL 119
>sp|Q03717|KCNB1_MOUSE Potassium voltage-gated channel subfamily B member 1 OS=Mus
musculus GN=Kcnb1 PE=1 SV=2
Length = 857
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Query: 50 MNLLNMMDAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVL--------- 100
M ++ RV LNVGG+ HE TL ++P TRL +L + +D +L
Sbjct: 21 MEIVRSKACSRRVRLNVGGLAHEVLWRTLDRLPRTRLGKLRDC-NTHDSLLQVCDDYSLE 79
Query: 101 -NEYFFDRHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
NEYFFDRHPG F +LN+YR RL + + +C S++ EL
Sbjct: 80 DNEYFFDRHPGAFTSILNFYRTGRLHMMEE---MCALSFSQEL 119
>sp|Q14721|KCNB1_HUMAN Potassium voltage-gated channel subfamily B member 1 OS=Homo
sapiens GN=KCNB1 PE=1 SV=2
Length = 858
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 50 MNLLNMMDAENRVVLNVGGIRHETYKATLKKIPATRLSRLT---------EALGNYDPVL 100
M ++ RV LNVGG+ HE TL ++P TRL +L E +Y
Sbjct: 21 MEIVRSKACSRRVRLNVGGLAHEVLWRTLDRLPRTRLGKLRDCNTHDSLLEVCDDYSLDD 80
Query: 101 NEYFFDRHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
NEYFFDRHPG F +LN+YR RL + + +C S++ EL
Sbjct: 81 NEYFFDRHPGAFTSILNFYRTGRLHMMEE---MCALSFSQEL 119
>sp|Q9MZ19|KCNB1_RABIT Potassium voltage-gated channel subfamily B member 1 OS=Oryctolagus
cuniculus GN=KCNB1 PE=2 SV=1
Length = 858
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 50 MNLLNMMDAENRVVLNVGGIRHETYKATLKKIPATRLSRLT---------EALGNYDPVL 100
M ++ RV LNVGG+ HE TL ++P TRL +L E +Y
Sbjct: 21 MEIVRSKACSRRVRLNVGGLAHEVLWRTLDRLPRTRLGKLRDCNTHDSLLEVCDDYSLDD 80
Query: 101 NEYFFDRHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
NEYFFDRHPG F +LN+YR RL + + +C S++ EL
Sbjct: 81 NEYFFDRHPGAFTSILNFYRTGRLHMMEE---MCALSFSQEL 119
>sp|P17970|KCNAB_DROME Potassium voltage-gated channel protein Shab OS=Drosophila
melanogaster GN=Shab PE=1 SV=2
Length = 985
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 60 NRVVLNVGGIRHETYKATLKKIPATRLSRLTEAL---------GNYDPVLNEYFFDRHPG 110
+RV +NVGG+RHE TL+++P TRL RL E +Y NEYFFDRHP
Sbjct: 277 SRVSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPK 336
Query: 111 VFAQVLNYYRVFRL 124
F+ +LN+YR +L
Sbjct: 337 SFSSILNFYRTGKL 350
>sp|Q63099|KCNB2_RAT Potassium voltage-gated channel subfamily B member 2 OS=Rattus
norvegicus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Query: 61 RVVLNVGGIRHETYKATLKKIPATRLSRLT---------EALGNYDPVLNEYFFDRHPGV 111
RV +NVGG+ HE TL ++P TRL +L E +Y+ NEYFFDRHPG
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGKLRDCNTHESLLEVCDDYNLNENEYFFDRHPGA 95
Query: 112 FAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
F +LN+YR +L + + +C S+ EL
Sbjct: 96 FTSILNFYRTGKLHMMEE---MCALSFGQEL 123
>sp|A6H8H5|KCNB2_MOUSE Potassium voltage-gated channel subfamily B member 2 OS=Mus
musculus GN=Kcnb2 PE=2 SV=2
Length = 907
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Query: 61 RVVLNVGGIRHETYKATLKKIPATRLSRLT---------EALGNYDPVLNEYFFDRHPGV 111
RV +NVGG+ HE TL ++P TRL +L E +Y+ NEYFFDRHPG
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGKLRDCNTHESLLEVCDDYNLNENEYFFDRHPGA 95
Query: 112 FAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
F +LN+YR +L + + +C S+ EL
Sbjct: 96 FTSILNFYRTGKLHMMEE---MCALSFGQEL 123
>sp|Q92953|KCNB2_HUMAN Potassium voltage-gated channel subfamily B member 2 OS=Homo
sapiens GN=KCNB2 PE=2 SV=2
Length = 911
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Query: 61 RVVLNVGGIRHETYKATLKKIPATRLSRLT---------EALGNYDPVLNEYFFDRHPGV 111
RV +NVGG+ HE TL ++P TRL +L E +Y+ NEYFFDRHPG
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGKLRDCNTHESLLEVCDDYNLNENEYFFDRHPGA 95
Query: 112 FAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
F +LN+YR +L + + +C S+ EL
Sbjct: 96 FTSILNFYRTGKLHMMEE---MCALSFGQEL 123
>sp|Q4ZHA6|KCNB2_BOVIN Potassium voltage-gated channel subfamily B member 2 OS=Bos taurus
GN=KCNB2 PE=2 SV=1
Length = 911
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Query: 61 RVVLNVGGIRHETYKATLKKIPATRLSRLT---------EALGNYDPVLNEYFFDRHPGV 111
RV +NVGG+ HE TL ++P TRL +L E +Y+ NEYFFDRHPG
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGKLRDCNTHESLLEVCDDYNLNENEYFFDRHPGA 95
Query: 112 FAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
F +LN+YR +L + + +C S+ EL
Sbjct: 96 FTSILNFYRTGKLHMMEE---MCALSFGQEL 123
>sp|Q95L11|KCNB2_RABIT Potassium voltage-gated channel subfamily B member 2 OS=Oryctolagus
cuniculus GN=KCNB2 PE=2 SV=1
Length = 911
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 12/91 (13%)
Query: 61 RVVLNVGGIRHETYKATLKKIPATRLSRLT---------EALGNYDPVLNEYFFDRHPGV 111
RV +NVGG+ HE TL ++P TRL +L E +Y+ NEYFFDRHPG
Sbjct: 36 RVKINVGGLNHEVLWRTLDRLPRTRLGKLRDCNTHESLLEVCDDYNLGDNEYFFDRHPGA 95
Query: 112 FAQVLNYYRVFRLPLGFKPWTVCMASYTSEL 142
F +LN+YR +L + + +C S+ EL
Sbjct: 96 FTSILNFYRTGKLHMMEE---MCALSFGQEL 123
>sp|Q95167|KCNB2_CANFA Potassium voltage-gated channel subfamily B member 2 (Fragment)
OS=Canis familiaris GN=KCNB2 PE=2 SV=2
Length = 809
Score = 66.2 bits (160), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 61 RVVLNVGGIRHETYKATLKKIPATRLSRLT---------EALGNYDPVLNEYFFDRHPGV 111
RV +NVGG+ HE T ++P TRL +L E +Y+ NEYFFDRHPG
Sbjct: 36 RVKINVGGLNHEVLWRTPDRLPRTRLGKLRDCNTHESLLEVCDDYNLGHNEYFFDRHPGA 95
Query: 112 FAQVLNYYRVFRL 124
F +LN+YR +L
Sbjct: 96 FTSILNFYRTGKL 108
>sp|P17971|KCNAL_DROME Potassium voltage-gated channel protein Shal OS=Drosophila
melanogaster GN=Shal PE=1 SV=2
Length = 571
Score = 64.3 bits (155), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 59 ENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNY 118
+ ++++NV G R ET++ TL+K P T L E YD EYFFDR P +F +LNY
Sbjct: 40 DEKLLINVSGRRFETWRNTLEKYPDTLLGS-NEREFFYDEDCKEYFFDRDPDIFRHILNY 98
Query: 119 YRVFRLPLGFKPWTVCMASYTSEL 142
YR +L P C+ SY EL
Sbjct: 99 YRTGKL---HYPKHECLTSYDEEL 119
>sp|Q9UIX4|KCNG1_HUMAN Potassium voltage-gated channel subfamily G member 1 OS=Homo
sapiens GN=KCNG1 PE=2 SV=1
Length = 513
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 14/97 (14%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLN----------EYFFD 106
D R+++NVGGI++ TL + P TRL +L +A N+D +LN E+FFD
Sbjct: 60 DRRRRIIINVGGIKYSLPWTTLDEFPLTRLGQL-KACTNFDDILNVCDDYDVTCNEFFFD 118
Query: 107 RHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSELL 143
R+PG F +L + R +L L + +C S+ ELL
Sbjct: 119 RNPGAFGTILTFLRAGKLRLLRE---MCALSFQEELL 152
>sp|A2BDX4|KCNG1_MOUSE Potassium voltage-gated channel subfamily G member 1 OS=Mus
musculus GN=Kcng1 PE=3 SV=1
Length = 514
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 14/97 (14%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVL----------NEYFFD 106
D ++++NVGGI++ TL + P TRL +L +A N+D +L NE+FFD
Sbjct: 60 DRRRQIIINVGGIKYSLPWTTLDEFPLTRLGQL-KACTNFDDILSVCDDYDVTCNEFFFD 118
Query: 107 RHPGVFAQVLNYYRVFRLPLGFKPWTVCMASYTSELL 143
R+PG F +L + R +L L + +C S+ ELL
Sbjct: 119 RNPGAFGTILTFLRAGKLRLLRE---MCALSFQEELL 152
>sp|Q63881|KCND2_RAT Potassium voltage-gated channel subfamily D member 2 OS=Rattus
norvegicus GN=Kcnd2 PE=1 SV=1
Length = 630
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+VLNV G R +T++ TL++ P T L +E Y P +YFFDR P +F +LN+YR
Sbjct: 43 IVLNVSGTRFQTWQDTLERYPDTLLGS-SERDFFYHPETQQYFFDRDPDIFRHILNFYRT 101
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P C+++Y EL
Sbjct: 102 GKL---HYPRHECISAYDEEL 119
>sp|P59995|KCND2_RABIT Potassium voltage-gated channel subfamily D member 2 OS=Oryctolagus
cuniculus GN=KCND2 PE=2 SV=1
Length = 630
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+VLNV G R +T++ TL++ P T L +E Y P +YFFDR P +F +LN+YR
Sbjct: 43 IVLNVSGTRFQTWQDTLERYPDTLLGS-SERDFFYHPETQQYFFDRDPDIFRHILNFYRT 101
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P C+++Y EL
Sbjct: 102 GKL---HYPRHECISAYDEEL 119
>sp|Q8HYZ1|KCND2_MUSPF Potassium voltage-gated channel subfamily D member 2 OS=Mustela
putorius furo GN=KCND2 PE=2 SV=1
Length = 630
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+VLNV G R +T++ TL++ P T L +E Y P +YFFDR P +F +LN+YR
Sbjct: 43 IVLNVSGTRFQTWQDTLERYPDTLLGS-SERDFFYHPETQQYFFDRDPDIFRHILNFYRT 101
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P C+++Y EL
Sbjct: 102 GKL---HYPRHECISAYDEEL 119
>sp|Q9Z0V2|KCND2_MOUSE Potassium voltage-gated channel subfamily D member 2 OS=Mus
musculus GN=Kcnd2 PE=1 SV=1
Length = 630
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+VLNV G R +T++ TL++ P T L +E Y P +YFFDR P +F +LN+YR
Sbjct: 43 IVLNVSGTRFQTWQDTLERYPDTLLGS-SERDFFYHPETQQYFFDRDPDIFRHILNFYRT 101
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P C+++Y EL
Sbjct: 102 GKL---HYPRHECISAYDEEL 119
>sp|Q9NZV8|KCND2_HUMAN Potassium voltage-gated channel subfamily D member 2 OS=Homo
sapiens GN=KCND2 PE=1 SV=2
Length = 630
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+VLNV G R +T++ TL++ P T L +E Y P +YFFDR P +F +LN+YR
Sbjct: 43 IVLNVSGTRFQTWQDTLERYPDTLLGS-SERDFFYHPETQQYFFDRDPDIFRHILNFYRT 101
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P C+++Y EL
Sbjct: 102 GKL---HYPRHECISAYDEEL 119
>sp|P22462|KCNC2_RAT Potassium voltage-gated channel subfamily C member 2 OS=Rattus
norvegicus GN=Kcnc2 PE=1 SV=1
Length = 638
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 56/141 (39%), Gaps = 54/141 (38%)
Query: 53 LNMMDAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEAL------------------- 93
+ ++ RV+LNVGG RHETY++TLK +P TRL+ L +
Sbjct: 1 MGKIENNERVILNVGGTRHETYRSTLKTLPGTRLALLASSEPQGDCLTAAGDKLQPLPPP 60
Query: 94 -------------------------------GNYDPVLNEYFF-DRHPGVFAQVLNYYRV 121
G+ P FF DRHPGVFA VLNYYR
Sbjct: 61 LSPPPRPPPLSPVPSGCFEGGAGNCSSHGGNGSDHPGGGREFFFDRHPGVFAYVLNYYRT 120
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P VC + EL
Sbjct: 121 GKLHC---PADVCGPLFEEEL 138
>sp|Q03719|KCND1_MOUSE Potassium voltage-gated channel subfamily D member 1 OS=Mus
musculus GN=Kcnd1 PE=1 SV=1
Length = 651
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+V+NV G R ET+K TL + P T L +E YD EYFFDR P +F VLN+YR
Sbjct: 42 LVVNVSGRRFETWKNTLDRYPDTLLGS-SEKEFFYDAESGEYFFDRDPDMFRHVLNFYRT 100
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
RL P C+ ++ EL
Sbjct: 101 GRLHC---PRQECIQAFDEEL 118
>sp|Q9NSA2|KCND1_HUMAN Potassium voltage-gated channel subfamily D member 1 OS=Homo
sapiens GN=KCND1 PE=1 SV=2
Length = 647
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+V+NV G R ET+K TL + P T L +E YD EYFFDR P +F VLN+YR
Sbjct: 42 LVVNVSGRRFETWKNTLDRYPDTLLGS-SEKEFFYDADSGEYFFDRDPDMFRHVLNFYRT 100
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
RL P C+ ++ EL
Sbjct: 101 GRLHC---PRQECIQAFDEEL 118
>sp|Q62897|KCND3_RAT Potassium voltage-gated channel subfamily D member 3 OS=Rattus
norvegicus GN=Kcnd3 PE=1 SV=2
Length = 655
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+VLNV G R +T++ TL++ P T L TE ++ EYFFDR P VF VLN+YR
Sbjct: 42 IVLNVSGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRT 100
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P C+++Y EL
Sbjct: 101 GKL---HYPRYECISAYDDEL 118
>sp|Q9TTT5|KCND3_RABIT Potassium voltage-gated channel subfamily D member 3 OS=Oryctolagus
cuniculus GN=KCND3 PE=2 SV=1
Length = 655
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+VLNV G R +T++ TL++ P T L TE ++ EYFFDR P VF VLN+YR
Sbjct: 42 IVLNVSGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRT 100
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P C+++Y EL
Sbjct: 101 GKL---HYPRYECISAYDDEL 118
>sp|Q9Z0V1|KCND3_MOUSE Potassium voltage-gated channel subfamily D member 3 OS=Mus
musculus GN=Kcnd3 PE=1 SV=1
Length = 655
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+VLNV G R +T++ TL++ P T L TE ++ EYFFDR P VF VLN+YR
Sbjct: 42 IVLNVSGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRT 100
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P C+++Y EL
Sbjct: 101 GKL---HYPRYECISAYDDEL 118
>sp|Q9UK17|KCND3_HUMAN Potassium voltage-gated channel subfamily D member 3 OS=Homo
sapiens GN=KCND3 PE=1 SV=3
Length = 655
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+VLNV G R +T++ TL++ P T L TE ++ EYFFDR P VF VLN+YR
Sbjct: 42 IVLNVSGRRFQTWRTTLERYPDTLLGS-TEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRT 100
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
+L P C+++Y EL
Sbjct: 101 GKL---HYPRYECISAYDDEL 118
>sp|A4K2Q6|KCNS1_OTOGA Potassium voltage-gated channel subfamily S member 1 OS=Otolemur
garnettii GN=KCNS1 PE=3 SV=1
Length = 528
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 58 AENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALG---------NYDPVLNEYFFDRH 108
++ + +NVGG+R L + P TRL RL A +YD E++FDRH
Sbjct: 48 SDEALSVNVGGVRRRLSARALARFPGTRLGRLQAAASEEQARRLCDDYDAAAGEFYFDRH 107
Query: 109 PGVFAQVLNYYRVFRL 124
PG F +L++YR RL
Sbjct: 108 PGFFLSLLHFYRTGRL 123
>sp|A4K2S2|KCNS1_LEMCA Potassium voltage-gated channel subfamily S member 1 OS=Lemur catta
GN=KCNS1 PE=3 SV=1
Length = 529
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 64 LNVGGIRHETYKATLKKIPATRLSRLTEA---------LGNYDPVLNEYFFDRHPGVFAQ 114
+NVGG+R L + P TRL RL A +YD E++FDRHPG F
Sbjct: 54 VNVGGVRRRLSARALARFPGTRLGRLQAAKSEEQARRLCDDYDAAAREFYFDRHPGFFLS 113
Query: 115 VLNYYRVFRL 124
+L++YR RL
Sbjct: 114 LLHFYRTGRL 123
>sp|P22459|KCNA4_HUMAN Potassium voltage-gated channel subfamily A member 4 OS=Homo
sapiens GN=KCNA4 PE=1 SV=2
Length = 653
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 41/75 (54%)
Query: 46 AGGKMNLLNMMDAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFF 105
GG + + D RVV+NV G+R ET TL + P T L + +DP+ NEYFF
Sbjct: 162 GGGGYSSVRYSDCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFF 221
Query: 106 DRHPGVFAQVLNYYR 120
DR+ F +L YY+
Sbjct: 222 DRNRPSFDAILYYYQ 236
>sp|Q52PG9|KCND1_BOVIN Potassium voltage-gated channel subfamily D member 1 OS=Bos taurus
GN=KCND1 PE=2 SV=1
Length = 648
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 62 VVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVLNYYRV 121
+V+NV G R ET+K TL + P T L +E Y+ EYFFDR P +F VLN+YR
Sbjct: 42 LVVNVSGRRFETWKNTLDRYPDTLLGS-SEKEFFYNADSGEYFFDRDPDMFRHVLNFYRT 100
Query: 122 FRLPLGFKPWTVCMASYTSEL 142
RL P C+ ++ EL
Sbjct: 101 GRLHC---PRQECIQAFDEEL 118
>sp|A4K2N8|KCNS1_PANTR Potassium voltage-gated channel subfamily S member 1 OS=Pan
troglodytes GN=KCNS1 PE=3 SV=1
Length = 526
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 64 LNVGGIRHETYKATLKKIPATRLSRLTEALG---------NYDPVLNEYFFDRHPGVFAQ 114
+NVGG+R + L + P TRL RL A +YD E++FDRHPG F
Sbjct: 54 VNVGGVRRQLSARALARFPGTRLGRLQAAASEEQARRLCDDYDEAAREFYFDRHPGFFLS 113
Query: 115 VLNYYRVFRL 124
+L++YR L
Sbjct: 114 LLHFYRTGHL 123
>sp|Q96KK3|KCNS1_HUMAN Potassium voltage-gated channel subfamily S member 1 OS=Homo
sapiens GN=KCNS1 PE=2 SV=2
Length = 526
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 64 LNVGGIRHETYKATLKKIPATRLSRLTEALG---------NYDPVLNEYFFDRHPGVFAQ 114
+NVGG+R + L + P TRL RL A +YD E++FDRHPG F
Sbjct: 54 VNVGGVRRQLSARALARFPGTRLGRLQAAASEEQARRLCDDYDEAAREFYFDRHPGFFLS 113
Query: 115 VLNYYRVFRL 124
+L++YR L
Sbjct: 114 LLHFYRTGHL 123
>sp|A4K2R3|KCNS1_GORGO Potassium voltage-gated channel subfamily S member 1 OS=Gorilla
gorilla gorilla GN=KCNS1 PE=3 SV=1
Length = 526
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 64 LNVGGIRHETYKATLKKIPATRLSRLTEALG---------NYDPVLNEYFFDRHPGVFAQ 114
+NVGG+R + L + P TRL RL A +YD E++FDRHPG F
Sbjct: 54 VNVGGVRRQLSARALARFPGTRLGRLHAAASEEQARRLCDDYDEAAREFYFDRHPGFFLS 113
Query: 115 VLNYYRVFRL 124
+L++YR L
Sbjct: 114 LLHFYRTGHL 123
>sp|A4K2V2|KCNS1_PONAB Potassium voltage-gated channel subfamily S member 1 OS=Pongo
abelii GN=KCNS1 PE=3 SV=1
Length = 526
Score = 57.4 bits (137), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 64 LNVGGIRHETYKATLKKIPATRLSRLTEALG---------NYDPVLNEYFFDRHPGVFAQ 114
+NVGG+R + L + P TRL RL A +YD E++FDRHPG F
Sbjct: 54 VNVGGVRRQLSARALARFPGTRLGRLQAAASEEQARRLCDDYDEAAREFYFDRHPGFFLG 113
Query: 115 VLNYYRVFRL 124
+L++YR L
Sbjct: 114 LLHFYRTGHL 123
>sp|P15385|KCNA4_RAT Potassium voltage-gated channel subfamily A member 4 OS=Rattus
norvegicus GN=Kcna4 PE=1 SV=1
Length = 655
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVL 116
D RVV+NV G+R ET TL + P T L + +DP+ NEYFFDR+ F +L
Sbjct: 175 DCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAIL 234
Query: 117 NYYR 120
YY+
Sbjct: 235 YYYQ 238
>sp|Q28527|KCNA4_MUSPF Potassium voltage-gated channel subfamily A member 4 OS=Mustela
putorius furo GN=KCNA4 PE=2 SV=1
Length = 654
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVL 116
D RVV+NV G+R ET TL + P T L + +DP+ NEYFFDR+ F +L
Sbjct: 174 DCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAIL 233
Query: 117 NYYR 120
YY+
Sbjct: 234 YYYQ 237
>sp|Q61423|KCNA4_MOUSE Potassium voltage-gated channel subfamily A member 4 OS=Mus
musculus GN=Kcna4 PE=1 SV=2
Length = 654
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVL 116
D RVV+NV G+R ET TL + P T L + +DP+ NEYFFDR+ F +L
Sbjct: 174 DCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAIL 233
Query: 117 NYYR 120
YY+
Sbjct: 234 YYYQ 237
>sp|Q05037|KCNA4_BOVIN Potassium voltage-gated channel subfamily A member 4 OS=Bos taurus
GN=KCNA4 PE=2 SV=1
Length = 660
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 57 DAENRVVLNVGGIRHETYKATLKKIPATRLSRLTEALGNYDPVLNEYFFDRHPGVFAQVL 116
D RVV+NV G+R ET TL + P T L + +DP+ NEYFFDR+ F +L
Sbjct: 181 DCCERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAIL 240
Query: 117 NYYR 120
YY+
Sbjct: 241 YYYQ 244
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,378,553
Number of Sequences: 539616
Number of extensions: 2550683
Number of successful extensions: 38014
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 33213
Number of HSP's gapped (non-prelim): 3597
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)