BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13138
(362 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BVU5|NUDT9_MOUSE ADP-ribose pyrophosphatase, mitochondrial OS=Mus musculus GN=Nudt9
PE=2 SV=1
Length = 350
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 163/274 (59%), Gaps = 8/274 (2%)
Query: 44 YPRSNVTRLKLPKEKYYVWEFALRSYNPEYFVHPSVIGQP-WADSE-NVNKYVNKFNELD 101
YP S V R ++P EK W + YNP + SV+ P WAD + + + + KFNE D
Sbjct: 70 YPGSKVERSQVPNEKVG-WLVEWQDYNPVEYTAVSVLAGPQWADPQISESNFSPKFNEKD 128
Query: 102 GYIDRRRCCNVKYELDYNTGRPLNPSGRTGICGRGLLGRWGPNHSAFLIVTRWFRDHNGD 161
G+++R+ N YE++ GRP NP+GRTG+ GRGLLGRWGPNH+A I+TRW RD +G+
Sbjct: 129 GHVERK-SQNGLYEIE--NGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDESGN 185
Query: 162 KVTMPSSGKPLLEFVTVKFN--GEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKE 219
K+T P SGK +L+FV +K GEW IPGG ++ E ++EF EEALN+ ++ E
Sbjct: 186 KITHPVSGKCILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKSSAE 245
Query: 220 SKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDG 279
+ I + L + +Y+GY+ D RNTDNAW+E HD+ GE L L GD
Sbjct: 246 KREIEEKLHALFSQEHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGETMDNLTLEAGDD 305
Query: 280 AEDVKWLIVHSDMTFNPTHKTFMKVVTDIHGAHW 313
A VKW+ + + +H F+K+V + AHW
Sbjct: 306 AGKVKWVDISDQLKLYASHSQFIKLVAEKRDAHW 339
>sp|Q5XIG0|NUDT9_RAT ADP-ribose pyrophosphatase, mitochondrial OS=Rattus norvegicus
GN=Nudt9 PE=2 SV=1
Length = 350
Score = 218 bits (555), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 163/274 (59%), Gaps = 8/274 (2%)
Query: 44 YPRSNVTRLKLPKEKYYVWEFALRSYNPEYFVHPSVIGQP-WADSE-NVNKYVNKFNELD 101
YP S V R K+P EK W + YNP + SV+ P WAD + + + + +FNE D
Sbjct: 70 YPGSKVERSKVPNEKVG-WLVEWQDYNPVEYTAVSVLAGPQWADPQISESSFSPRFNEKD 128
Query: 102 GYIDRRRCCNVKYELDYNTGRPLNPSGRTGICGRGLLGRWGPNHSAFLIVTRWFRDHNGD 161
G+++R+ N YE++ GRP NP+GRTG+ GRGLLGRWGPNH+A I+TRW RD +G+
Sbjct: 129 GHVERK-SQNGLYEIE--NGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDESGN 185
Query: 162 KVTMPSSGKPLLEFVTVKFN--GEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKE 219
K+T P SGK +L+FV +K GEW IPGG ++ E ++EF EEALN+ ++ E
Sbjct: 186 KITHPVSGKCILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKSSAE 245
Query: 220 SKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDG 279
+ I + L + +Y+GY+ D RNTDNAW+E HD+ GE L L GD
Sbjct: 246 KREIEEKLHALFSQEHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGETMDNLTLEAGDD 305
Query: 280 AEDVKWLIVHSDMTFNPTHKTFMKVVTDIHGAHW 313
A VKW+ + + +H F+K+V + AHW
Sbjct: 306 AGKVKWVDISDQLKLYASHSQFIKLVAEKRDAHW 339
>sp|Q9BW91|NUDT9_HUMAN ADP-ribose pyrophosphatase, mitochondrial OS=Homo sapiens GN=NUDT9
PE=1 SV=1
Length = 350
Score = 214 bits (545), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 115/274 (41%), Positives = 163/274 (59%), Gaps = 8/274 (2%)
Query: 44 YPRSNVTRLKLPKEKYYVWEFALRSYNPEYFVHPSVIGQP-WADSE-NVNKYVNKFNELD 101
YP S V R ++P EK W + Y P + SV+ P WAD + + + + KFNE D
Sbjct: 70 YPGSKVERSQVPNEKVG-WLVEWQDYKPVEYTAVSVLAGPRWADPQISESNFSPKFNEKD 128
Query: 102 GYIDRRRCCNVKYELDYNTGRPLNPSGRTGICGRGLLGRWGPNHSAFLIVTRWFRDHNGD 161
G+++R+ N YE++ GRP NP+GRTG+ GRGLLGRWGPNH+A I+TRW RD +G+
Sbjct: 129 GHVERK-SKNGLYEIE--NGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGN 185
Query: 162 KVTMPSSGKPLLEFVTVKFN--GEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKE 219
K+ P SGK +L+FV +K GEW IPGG ++ E ++EF EEALN+ T+ E
Sbjct: 186 KIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAE 245
Query: 220 SKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDG 279
+ I + L + + +Y+GY+ D RNTDNAW+E HD+ GE L L GD
Sbjct: 246 KREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDD 305
Query: 280 AEDVKWLIVHSDMTFNPTHKTFMKVVTDIHGAHW 313
A VKW+ ++ + +H F+K+V + AHW
Sbjct: 306 AGKVKWVDINDKLKLYASHSQFIKLVAEKRDAHW 339
>sp|Q09297|NDX6_CAEEL Putative nudix hydrolase 6 OS=Caenorhabditis elegans GN=ndx-6 PE=3
SV=2
Length = 260
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 143/275 (52%), Gaps = 28/275 (10%)
Query: 38 RNFGEFYPRSNVTRLKLPKEKYYVWEFALRSYNPEYFVHPSVIGQPWADSENVNK-YVNK 96
RN Y SN+ RL +P + W YNP P V G WAD E K +
Sbjct: 9 RNIDTVYLGSNIHRLNVP-DNLVKWSQEWSGYNPPAHTDPKVDGAVWADPEIDEKTFQPS 67
Query: 97 FNELDGYIDRRRCCNVKYELDYNTGRPLNPSGRTGICGRGLLGRWGPNHSAFLIVTRWFR 156
+N +DG I+R +Y D T RPLNP GRTG+ GRGLLGRWGPNH+A IV+R
Sbjct: 68 WNAIDGKINRVSYV-CQYSFDPVTLRPLNPIGRTGLSGRGLLGRWGPNHAADPIVSR--T 124
Query: 157 DHNGDKVTMPSSGKPLLEFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214
+ NGD LEFV V+ NGEW IPGG ++ E R+EF EEA++
Sbjct: 125 NDNGD-----------LEFVAVQRHDNGEWAIPGGMVDAGEHVSQTLRREFAEEAMHG-- 171
Query: 215 MTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPL 274
+ E+ L +N +YRGY+ D RNTDNAW+E V HD KG + L
Sbjct: 172 IVDSENLDELW-------NNGKELYRGYVDDPRNTDNAWMETVVFNFHDSKGL-LKNVAL 223
Query: 275 SPGDGAEDVKWLIVHSDMTFNPTHKTFMKVVTDIH 309
GD A+ ++W+ V+S+ +H F+ ++ + H
Sbjct: 224 QAGDDAKALRWIAVNSNEPLYASHSHFIDLLKESH 258
>sp|O94759|TRPM2_HUMAN Transient receptor potential cation channel subfamily M member 2
OS=Homo sapiens GN=TRPM2 PE=1 SV=2
Length = 1503
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 127/280 (45%), Gaps = 31/280 (11%)
Query: 43 FYPRSNVTRLKLPKEKYYVWEFALRSYNPEYFV---HPSVIGQPWADSENVNKYVNKFNE 99
YP VTR +P EK WE Y+P ++ + P D+ + ++N
Sbjct: 1246 LYPNCPVTRFPVPNEKV-PWETEFLIYDPPFYTAERKDAAAMDPMGDTLEPLSTI-QYNV 1303
Query: 100 LDGYIDRRRCCNVKYELDYNTGRPLNPSGRTGICGRGLLGRWGPNHSAFLIVTRWFRDHN 159
+DG DRR + G PLNP GRTG+ GRG L +GPNH+ + +VTRW R+ +
Sbjct: 1304 VDGLRDRR---SFHGPYTVQAGLPLNPMGRTGLRGRGSLSCFGPNHTLYPMVTRWRRNED 1360
Query: 160 GDKVTMPSSGKPLLEFVTVK--FNGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTA 217
G S K +LE + VK + W +PGG E E + R K L +
Sbjct: 1361 G--AICRKSIKKMLEVLVVKLPLSEHWALPGGSREPGEM-LPRKLKRILRQ--------- 1408
Query: 218 KESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVH--DKKGEHFMAL--P 273
+ S L+ M+ VY+GYM D RNTDNAW+E +VH D+ L
Sbjct: 1409 EHWPSFENLLKCGME-----VYKGYMDDPRNTDNAWIETVAVSVHFQDQNDVELNRLNSN 1463
Query: 274 LSPGDGAEDVKWLIVHSDMTFNPTHKTFMKVVTDIHGAHW 313
L D ++W +V + HKT ++ GAH+
Sbjct: 1464 LHACDSGASIRWQVVDRRIPLYANHKTLLQKAAAEFGAHY 1503
>sp|Q91YD4|TRPM2_MOUSE Transient receptor potential cation channel subfamily M member 2
OS=Mus musculus GN=Trpm2 PE=2 SV=1
Length = 1507
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 37/286 (12%)
Query: 43 FYPRSNVTRLKLPKEKYYVWEFALRSYNPEYFVHPS--VIGQPWADSENVNKYVNKFNEL 100
YP + + R +P EK W Y+P ++ + P D+ ++ +N +
Sbjct: 1244 LYPNARIMRFPVPNEKV-PWAAEFLIYDPPFYTAEKDVALTDPVGDTAEPLSKIS-YNVV 1301
Query: 101 DGYIDRRRCCNVKYELDYNTGRPLNPSGRTGICGRGLLGRWGPNHSAFLIVTRWFRDHNG 160
DG DRR V Y ++Y G PLNP GRTG+ GRG L +GPNH+ +VTRW R+ G
Sbjct: 1302 DGPTDRRSFHGV-YVVEY--GFPLNPMGRTGLRGRGSLSWFGPNHTLQPVVTRWKRNQGG 1358
Query: 161 DKVTMPSSGKPLLEFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAK 218
S + +LE + +K + W +PGG E E + ++ +E A
Sbjct: 1359 --AICRKSVRKMLEVLVMKLPRSEHWALPGGSREPGEMLPRKLKRVLRQEFWVA------ 1410
Query: 219 ESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVH--DKKGEHFMALPLS- 275
ET++ VY+GY+ D RNTDNAW+E ++H D+ L +
Sbjct: 1411 --------FETLLMQGTE-VYKGYVDDPRNTDNAWIETVAVSIHFQDQNDMELKRLEENL 1461
Query: 276 ----PGDGAEDVK----WLIVHSDMTFNPTHKTFMKVVTDIHGAHW 313
P + D+K W +V + HKT ++ V + GAH+
Sbjct: 1462 HTHDPKELTRDLKLSTEWQVVDRRIPLYANHKTILQKVASLFGAHF 1507
>sp|P34641|CED11_CAEEL Protein ced-11 OS=Caenorhabditis elegans GN=ced-11 PE=2 SV=1
Length = 1418
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 37 DRNFGEFYPRSNVTRLKLPKEKYYVWEFALRSYNPEYFVHPSVIGQPWAD-SENVNKYVN 95
+ F E YP SN+ ++ + W + YNP ++ P+ D +V KYV+
Sbjct: 1157 ELQFFEKYPESNILKISV-NMVSKPWTVLVPRYNPPFYCKPA------EDFPSDVQKYVD 1209
Query: 96 KFNELD-GYIDR----RRCCNVKYELD-----YNTGRPLNPSGRTGICGRGLLGRWGPNH 145
E + G + R R+ +V D G PLNP+GRTG+ GRG R+G N
Sbjct: 1210 IATEQNVGELKRIWRSRQANDVTSSNDKCWKLSAAGFPLNPNGRTGMAGRGNHPRFGANR 1269
Query: 146 SAFLIV 151
+ +V
Sbjct: 1270 RCYYVV 1275
>sp|Q6TEC1|NUD16_XENLA U8 snoRNA-decapping enzyme OS=Xenopus laevis GN=nudt16 PE=1 SV=1
Length = 212
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 175 FVTVKFNGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAK 218
+ ++F+G G PGGF++ ++ ++ G K LEE L + T +
Sbjct: 59 LMMMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVE 102
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 33.5 bits (75), Expect = 2.8, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 172 LLEFVTVKFNGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSIL----KHL 227
+ + + F+ G GG ++G + Y G+ E L+ L + A K +L L
Sbjct: 1043 MFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL--PKLRATNHKVLLFCQMTSL 1100
Query: 228 ETVMDDNCHFVYRGY 242
T+M+D +F YRG+
Sbjct: 1101 MTIMED--YFAYRGF 1113
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 33.5 bits (75), Expect = 2.9, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 172 LLEFVTVKFNGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSIL----KHL 227
+ + + F+ G GG ++G + Y G+ E L+ L + A K +L L
Sbjct: 1051 MFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL--PKLRATNHKVLLFCQMTSL 1108
Query: 228 ETVMDDNCHFVYRGY 242
T+M+D +F YRG+
Sbjct: 1109 MTIMED--YFAYRGF 1121
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 33.5 bits (75), Expect = 2.9, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 172 LLEFVTVKFNGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSIL----KHL 227
+ + + F+ G GG ++G + Y G+ E L+ L + A K +L L
Sbjct: 1051 MFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL--PKLRATNHKVLLFCQMTSL 1108
Query: 228 ETVMDDNCHFVYRGY 242
T+M+D +F YRG+
Sbjct: 1109 MTIMED--YFAYRGF 1121
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 33.5 bits (75), Expect = 2.9, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 172 LLEFVTVKFNGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSIL----KHL 227
+ + + F+ G GG ++G + Y G+ E L+ L + A K +L L
Sbjct: 1051 MFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL--PKLRATNHKVLLFCQMTSL 1108
Query: 228 ETVMDDNCHFVYRGY 242
T+M+D +F YRG+
Sbjct: 1109 MTIMED--YFAYRGF 1121
>sp|P27400|GAG_SFV3L Gag polyprotein OS=Simian foamy virus type 3 (strain LK3) GN=gag
PE=3 SV=1
Length = 643
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 119 NTGRPLNPSGRTGICGRGLLGRWGPNHSAFLIVTRWFRDHNGDKVTMP---SSGKPLLEF 175
N G P P+ R I R L G WGP + +++V+ + +D +G + P G+P+
Sbjct: 17 NLGIPRQPNHREVIGLRMLGGWWGPG-TRYILVSIFLQDDSGQPLQQPRWRPEGRPVNPL 75
Query: 176 VTVKFNGEWG 185
V WG
Sbjct: 76 VHNTIEAPWG 85
>sp|B2JDY9|SYI_BURP8 Isoleucine--tRNA ligase OS=Burkholderia phymatum (strain DSM 17167
/ STM815) GN=ileS PE=3 SV=1
Length = 945
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Query: 177 TVKFNGEWGIPGGFIEGKETYMDRGRK-EFLEEALNASNMTAKESKSILKHLETVMDDNC 235
T+ +WG+P F KET R E LEE ++ E+ L E + DD
Sbjct: 482 TLSRQRQWGVPMAFFVHKETGELHPRTLELLEEVAKRVEVSGIEAWQTLDPRELIGDDAN 541
Query: 236 HFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEH 268
+ + R+T + W + T H +G H
Sbjct: 542 MY------EKNRDTLDVWFDSGTTHWHVLRGSH 568
>sp|P19424|GUN_BACS6 Endoglucanase OS=Bacillus sp. (strain KSM-635) PE=1 SV=1
Length = 941
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 18 KLNWTILLFNTPYESGYMVDRNFGEFYPRSNVTRLKLPKEKYYVWEF 64
+ NW YE+G + + GEF P N+TR ++ +E+
Sbjct: 104 RKNWAYKEIQAAYEAGIVTGKTNGEFAPNENITREQMAAMAVRAYEY 150
>sp|P0A9U3|YBIT_ECOLI Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli (strain K12) GN=ybiT PE=3 SV=1
Length = 530
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 163 VTMPSSGKPLLEFVTVKFNG--EWGIPGGFIEGKETYM 198
VTM KPL E ++VKF G +G+ G GK T+M
Sbjct: 7 VTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM 44
>sp|P0A9U4|YBIT_ECOL6 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ybiT PE=3 SV=1
Length = 530
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 163 VTMPSSGKPLLEFVTVKFNG--EWGIPGGFIEGKETYM 198
VTM KPL E ++VKF G +G+ G GK T+M
Sbjct: 7 VTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM 44
>sp|P0A9U5|YBIT_ECO57 Uncharacterized ABC transporter ATP-binding protein YbiT
OS=Escherichia coli O157:H7 GN=ybiT PE=3 SV=1
Length = 530
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 163 VTMPSSGKPLLEFVTVKFNG--EWGIPGGFIEGKETYM 198
VTM KPL E ++VKF G +G+ G GK T+M
Sbjct: 7 VTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM 44
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,971,987
Number of Sequences: 539616
Number of extensions: 6874448
Number of successful extensions: 12680
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 12650
Number of HSP's gapped (non-prelim): 40
length of query: 362
length of database: 191,569,459
effective HSP length: 119
effective length of query: 243
effective length of database: 127,355,155
effective search space: 30947302665
effective search space used: 30947302665
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)