Query psy13138
Match_columns 362
No_of_seqs 279 out of 1621
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 20:32:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13138.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13138hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q33_A Pyrophosphatase, ADP-ri 100.0 8.4E-70 2.9E-74 524.2 23.2 280 34-317 2-285 (292)
2 2fml_A MUTT/nudix family prote 99.8 2.2E-18 7.6E-23 163.7 15.4 149 141-329 36-214 (273)
3 2fb1_A Conserved hypothetical 99.7 7.3E-18 2.5E-22 155.9 11.2 146 140-328 9-159 (226)
4 3gz5_A MUTT/nudix family prote 99.7 3.5E-18 1.2E-22 159.5 7.6 146 142-330 20-174 (240)
5 3i7u_A AP4A hydrolase; nudix p 99.7 2.6E-17 8.9E-22 139.8 10.0 111 174-310 16-130 (134)
6 3u53_A BIS(5'-nucleosyl)-tetra 99.6 1.3E-15 4.6E-20 131.2 11.2 134 146-310 5-143 (155)
7 3i9x_A MUTT/nudix family prote 99.6 5.8E-16 2E-20 137.8 9.0 137 143-313 25-176 (187)
8 2yyh_A MUTT domain, 8-OXO-DGTP 99.6 8.8E-15 3E-19 123.1 15.2 125 142-307 7-136 (139)
9 3son_A Hypothetical nudix hydr 99.5 7.7E-14 2.6E-18 118.6 13.5 121 173-312 20-144 (149)
10 2pbt_A AP4A hydrolase; nudix p 99.5 1.2E-13 4.1E-18 114.6 9.5 113 174-311 16-131 (134)
11 1ktg_A Diadenosine tetraphosph 99.5 2.9E-13 9.9E-18 113.0 11.5 112 173-310 18-136 (138)
12 3q1p_A Phosphohydrolase (MUTT/ 99.5 5.3E-13 1.8E-17 120.9 13.7 113 174-311 80-197 (205)
13 2qjo_A Bifunctional NMN adenyl 99.4 4.7E-13 1.6E-17 128.8 12.8 117 174-308 215-340 (341)
14 2qjt_B Nicotinamide-nucleotide 99.4 1E-12 3.6E-17 127.2 15.3 121 174-311 220-350 (352)
15 4dyw_A MUTT/nudix family prote 99.4 6.1E-13 2.1E-17 114.8 11.8 107 174-306 41-154 (157)
16 2b06_A MUTT/nudix family prote 99.4 4.5E-13 1.6E-17 114.4 10.5 109 171-308 21-135 (155)
17 3fk9_A Mutator MUTT protein; s 99.4 2.9E-13 9.8E-18 121.1 9.0 113 174-310 16-132 (188)
18 3shd_A Phosphatase NUDJ; nudix 99.4 1E-12 3.6E-17 111.9 12.1 122 141-307 2-132 (153)
19 3f6a_A Hydrolase, nudix family 99.4 3E-12 1E-16 110.2 15.1 108 174-290 18-129 (159)
20 3f13_A Putative nudix hydrolas 99.4 1.3E-12 4.5E-17 114.6 12.9 105 174-312 28-134 (163)
21 3o8s_A Nudix hydrolase, ADP-ri 99.4 1.3E-12 4.6E-17 118.3 13.1 113 174-311 82-198 (206)
22 1vcd_A NDX1; nudix protein, di 99.4 9.4E-13 3.2E-17 108.2 10.1 106 174-309 15-124 (126)
23 3ees_A Probable pyrophosphohyd 99.4 6E-13 2.1E-17 112.6 8.8 111 174-314 34-152 (153)
24 3oga_A Nucleoside triphosphata 99.4 1.6E-12 5.5E-17 112.4 11.4 113 174-305 40-162 (165)
25 3cng_A Nudix hydrolase; struct 99.4 6.8E-12 2.3E-16 111.8 15.7 114 174-319 52-174 (189)
26 2o1c_A DATP pyrophosphohydrola 99.4 1.2E-12 4.1E-17 110.2 9.1 117 174-307 23-147 (150)
27 1k2e_A Nudix homolog; nudix/MU 99.4 2.2E-12 7.5E-17 111.0 11.0 115 174-310 13-137 (156)
28 3fcm_A Hydrolase, nudix family 99.4 5E-12 1.7E-16 113.3 13.7 124 174-315 59-190 (197)
29 3grn_A MUTT related protein; s 99.4 3.5E-12 1.2E-16 108.9 12.1 108 174-310 21-138 (153)
30 2azw_A MUTT/nudix family prote 99.4 1.2E-12 4E-17 110.4 8.6 109 174-307 32-145 (148)
31 3fjy_A Probable MUTT1 protein; 99.4 1.5E-12 5E-17 127.9 10.3 150 145-311 4-177 (364)
32 3gwy_A Putative CTP pyrophosph 99.3 6.2E-12 2.1E-16 105.8 11.5 106 174-309 18-133 (140)
33 3gg6_A Nudix motif 18, nucleos 99.3 8.9E-12 3.1E-16 106.5 12.5 109 174-311 33-149 (156)
34 3exq_A Nudix family hydrolase; 99.3 2.3E-12 8E-17 111.6 8.8 106 174-307 24-136 (161)
35 3r03_A Nudix hydrolase; struct 99.3 5.3E-12 1.8E-16 106.0 10.4 109 174-310 21-137 (144)
36 3q93_A 7,8-dihydro-8-oxoguanin 99.3 6.4E-12 2.2E-16 110.9 11.0 106 174-308 37-150 (176)
37 3hhj_A Mutator MUTT protein; n 99.3 8.4E-12 2.9E-16 107.1 10.8 107 174-308 42-156 (158)
38 1rya_A GDP-mannose mannosyl hy 99.3 6.5E-12 2.2E-16 107.3 9.1 41 174-214 31-76 (160)
39 3id9_A MUTT/nudix family prote 99.3 1.1E-11 3.7E-16 107.8 10.6 110 174-307 35-150 (171)
40 2pqv_A MUTT/nudix family prote 99.3 3.1E-12 1.1E-16 109.2 6.8 42 174-215 31-72 (154)
41 3h95_A Nucleoside diphosphate- 99.3 1.3E-11 4.4E-16 110.9 11.1 41 174-214 40-84 (199)
42 1vk6_A NADH pyrophosphatase; 1 99.3 4.8E-11 1.6E-15 113.4 15.3 107 174-311 152-266 (269)
43 2rrk_A ORF135, CTP pyrophospho 99.3 7.9E-12 2.7E-16 104.3 8.3 107 174-310 21-135 (140)
44 2b0v_A Nudix hydrolase; struct 99.3 2.7E-11 9.3E-16 102.7 11.0 41 174-214 20-65 (153)
45 2kdv_A RNA pyrophosphohydrolas 99.3 1.7E-10 5.7E-15 100.6 15.9 121 174-311 21-153 (164)
46 3eds_A MUTT/nudix family prote 99.3 2.7E-11 9.1E-16 103.9 10.5 41 174-214 34-75 (153)
47 2fkb_A Putative nudix hydrolas 99.2 2.3E-11 8E-16 106.5 10.1 137 130-311 22-170 (180)
48 1mut_A MUTT, nucleoside tripho 99.2 1.6E-11 5.5E-16 100.8 7.9 102 174-305 17-126 (129)
49 1f3y_A Diadenosine 5',5'''-P1, 99.2 2.1E-11 7.3E-16 104.2 8.3 122 174-312 27-164 (165)
50 1hzt_A Isopentenyl diphosphate 99.2 1.8E-11 6.3E-16 108.7 6.5 74 119-214 11-93 (190)
51 2fvv_A Diphosphoinositol polyp 99.2 9.2E-12 3.2E-16 112.2 3.8 113 174-316 55-172 (194)
52 1sjy_A MUTT/nudix family prote 99.1 3.4E-10 1.2E-14 96.5 10.8 92 174-290 26-126 (159)
53 2jvb_A Protein PSU1, mRNA-deca 99.1 4E-11 1.4E-15 101.2 3.6 41 174-214 18-60 (146)
54 1q27_A Putative nudix hydrolas 99.1 6.6E-10 2.3E-14 96.4 10.9 42 174-215 47-96 (171)
55 1x51_A A/G-specific adenine DN 99.1 2E-10 7E-15 98.2 6.7 104 174-307 35-148 (155)
56 2w4e_A MUTT/nudix family prote 99.0 5.4E-10 1.9E-14 94.9 9.2 41 174-214 18-64 (145)
57 2a6t_A SPAC19A8.12; alpha/beta 99.0 1.9E-09 6.6E-14 102.2 11.4 41 174-214 115-158 (271)
58 1vhz_A ADP compounds hydrolase 99.0 2.4E-09 8.2E-14 96.4 11.0 41 174-214 61-107 (198)
59 3e57_A Uncharacterized protein 99.0 2E-10 6.9E-15 105.5 3.8 41 174-214 80-136 (211)
60 2yvp_A NDX2, MUTT/nudix family 99.0 1.4E-09 4.7E-14 95.6 9.0 41 174-214 54-100 (182)
61 1nqz_A COA pyrophosphatase (MU 99.0 2.4E-09 8.3E-14 95.1 10.2 42 173-214 48-96 (194)
62 2dsc_A ADP-sugar pyrophosphata 99.0 7.3E-09 2.5E-13 93.9 13.4 41 174-214 78-124 (212)
63 1v8y_A ADP-ribose pyrophosphat 98.9 1.4E-09 4.8E-14 94.6 8.1 40 174-214 46-91 (170)
64 1u20_A U8 snoRNA-binding prote 98.9 2.5E-09 8.4E-14 97.4 7.5 41 174-214 57-99 (212)
65 1mk1_A ADPR pyrophosphatase; n 98.9 3.4E-09 1.2E-13 95.8 7.8 41 174-214 56-103 (207)
66 3o6z_A GDP-mannose pyrophospha 98.8 1.7E-08 6E-13 90.1 10.7 40 174-214 59-110 (191)
67 1g0s_A Hypothetical 23.7 kDa p 98.8 1.5E-08 5E-13 92.0 9.8 41 174-214 71-122 (209)
68 3fsp_A A/G-specific adenine gl 98.8 8.9E-09 3E-13 101.6 8.2 102 174-309 253-362 (369)
69 3qsj_A Nudix hydrolase; struct 98.8 2.8E-08 9.6E-13 92.4 10.5 145 143-307 7-209 (232)
70 2xsq_A U8 snoRNA-decapping enz 98.8 7.5E-09 2.6E-13 95.1 6.4 40 175-214 67-108 (217)
71 3q91_A Uridine diphosphate glu 98.7 4.2E-08 1.4E-12 90.2 10.0 33 182-214 95-128 (218)
72 3rh7_A Hypothetical oxidoreduc 98.6 9E-08 3.1E-12 93.0 7.9 111 142-311 181-296 (321)
73 3kvh_A Protein syndesmos; NUDT 98.4 1.7E-07 5.7E-12 84.9 4.3 61 144-211 21-84 (214)
74 3dup_A MUTT/nudix family prote 98.3 6E-06 2.1E-10 79.5 14.1 69 131-213 104-181 (300)
75 2dho_A Isopentenyl-diphosphate 98.3 6.8E-06 2.3E-10 76.1 12.2 41 174-214 72-129 (235)
76 2pny_A Isopentenyl-diphosphate 98.3 6.8E-06 2.3E-10 76.7 12.0 41 174-214 83-140 (246)
77 3bho_A Cleavage and polyadenyl 98.1 3E-06 1E-10 77.2 6.6 39 173-211 73-112 (208)
No 1
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=100.00 E-value=8.4e-70 Score=524.19 Aligned_cols=280 Identities=41% Similarity=0.762 Sum_probs=247.7
Q ss_pred ccccCcCCCCCCCCCeeEeeCCCCccccceecCCCcCCCcccCCCCCCCC-CCCCCCC-cccCccccccCCccceeeeec
Q psy13138 34 YMVDRNFGEFYPRSNVTRLKLPKEKYYVWEFALRSYNPEYFVHPSVIGQP-WADSENV-NKYVNKFNELDGYIDRRRCCN 111 (362)
Q Consensus 34 ~~~~~~r~~~Yp~s~~~R~~Vp~~~v~~W~~~~~~Y~P~~yt~~~~~~~~-waD~~~~-~~~~~~~N~~Dg~v~R~S~~~ 111 (362)
..|++||+++||+|+|+||+||++|| +|+++||+|+||+||||+++++| ||||++. +.+.++||++||.|||+|+ +
T Consensus 2 ~~~~~~~~~~y~~~~~~r~~v~~~~~-~w~~~~~~Y~p~~yt~~~~~~~~~~~d~~~~~~~~~~~~n~~d~~v~R~s~-~ 79 (292)
T 1q33_A 2 NSHNKARTSPYPGSKVERSQVPNEKV-GWLVEWQDYKPVEYTAVSVLAGPRWADPQISESNFSPKFNEKDGHVERKSK-N 79 (292)
T ss_dssp CCCSGGGCSSCTTSCCCCCCCCGGGC-STTSCCTTCCCEEEECHHHHTCCTTSCCCTTCTTCCCCTTSEETTEECCCT-T
T ss_pred CcccccccCcCCCCCcEEEeCCcccc-ccccccCCcCCCcccChhhccCCCCCCCCcCcccccccccccCCCcceeec-c
Confidence 35889999999999999999999999 99999999999999999999999 9999997 4567999999999999999 9
Q ss_pred eeeEeeCCCCCCCCCCCCcccccccccCccCCCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe--CCeeeCcee
Q psy13138 112 VKYELDYNTGRPLNPSGRTGICGRGLLGRWGPNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF--NGEWGIPGG 189 (362)
Q Consensus 112 g~y~vd~~~G~P~NP~GRTGl~GRG~L~rwGPNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR--~g~WaLPGG 189 (362)
|.|.| .+|+|+||+||||++|||+|++|||||++|+|||||+++++|.++.+..++++.|+||+++| .|.|+||||
T Consensus 80 g~~~~--~~g~p~np~Grtg~~gr~~l~~wgp~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG 157 (292)
T 1q33_A 80 GLYEI--ENGRPRNPAGRTGLVGRGLLGRWGPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGG 157 (292)
T ss_dssp SCCCE--ETTEECCTTCCCSEEEEETCSSSEEEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCE
T ss_pred cceec--cCCcccCCCccccccCcccccccCccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCCCc
Confidence 99999 89999999999999999999999999999999999999999998887666778999999999 799999999
Q ss_pred ecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcc
Q psy13138 190 FIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHF 269 (362)
Q Consensus 190 ~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~ 269 (362)
+|++||++.+||+|||.||||+.+..+..++..+...++++++.++..+|.++.+||+++|++|+++++|.++...++.+
T Consensus 158 ~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~ 237 (292)
T 1q33_A 158 MVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIM 237 (292)
T ss_dssp ECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSSTTT
T ss_pred ccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEEEEeCCCccc
Confidence 99999999999999999999998543322232222356777753356889999999999999999999999998766544
Q ss_pred cccCCCCCCcccceEEEecCCCCCCCcCHHHHHHHHHHHhcCccccce
Q psy13138 270 MALPLSPGDGAEDVKWLIVHSDMTFNPTHKTFMKVVTDIHGAHWYAYV 317 (362)
Q Consensus 270 ~~~~l~a~dda~~v~W~~vd~~lpL~asH~~iL~~a~~~~~a~~~~~p 317 (362)
+...+.+++|+.+++|+++++...|+++|+.||+++++.++++|....
T Consensus 238 ~~~~~~~~~E~~~~~W~~~del~~L~~~h~~il~~~~~~~~a~~~~~~ 285 (292)
T 1q33_A 238 DNLMLEAGDDAGKVKWVDINDKLKLYASHSQFIKLVAEKRDAHWSEDS 285 (292)
T ss_dssp TTCCCCCCTTCSEEEEEECCTTCCCSTTHHHHHHHHHHHHTCCCCSCC
T ss_pred cccccCCCCccceEEEEEcccCcccCHhHHHHHHHHHHHhcCcccCCC
Confidence 434556678899999999995556999999999999999999987754
No 2
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.78 E-value=2.2e-18 Score=163.75 Aligned_cols=149 Identities=17% Similarity=0.255 Sum_probs=112.1
Q ss_pred cCCCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhcccccc
Q psy13138 141 WGPNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNM 215 (362)
Q Consensus 141 wGPNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~ 215 (362)
--|..++|+||+++..+ ...++||+++| .|.|+||||+|++||++.+||+||+.||||+.+..
T Consensus 36 ~~p~v~v~~vv~~~~~~------------~~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~ 103 (273)
T 2fml_A 36 EKPSLTVDMVLLCYNKE------------ADQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQ 103 (273)
T ss_dssp CCCEEEEEEEEEEEETT------------TTEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCG
T ss_pred CCCceEEEEEEEEEcCC------------CCCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCc
Confidence 35778999999997631 12478999998 48899999999999999999999999999986543
Q ss_pred chhhhHHHHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC-----
Q psy13138 216 TAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS----- 290 (362)
Q Consensus 216 s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~----- 290 (362)
. .++ ....|.....|| ..|+.+++|.+....+ .+.+++++.+++|+++++
T Consensus 104 ~---------~l~------~l~~~~~~~r~~----~~~~~~~~y~a~~~~~------~~~~~~E~~~~~W~~~~e~~~~~ 158 (273)
T 2fml_A 104 E---------NIE------QLHSFSRPDRDP----RGWVVTVSYLAFIGEE------PLIAGDDAKEVHWFNLERHGQHI 158 (273)
T ss_dssp G---------GEE------EEEEECCTTSST----TSSEEEEEEEEECCCC------CCCCCTTEEEEEEEEEEEETTEE
T ss_pred C---------cEE------EEEEEcCCCCCC----CceEEEEEEEEEeCCC------CCCCCcceeeEEEEEhhHhhhhh
Confidence 1 111 233332111122 3578888887665433 134567888999999984
Q ss_pred --------------------CCCCCcCHHHHHHHHHHHhcCccccceeeeecCCccccc
Q psy13138 291 --------------------DMTFNPTHKTFMKVVTDIHGAHWYAYVIGLNSWNLTSAT 329 (362)
Q Consensus 291 --------------------~lpL~asH~~iL~~a~~~~~a~~~~~pigf~~~~l~~~~ 329 (362)
..+|.++|..||+.+.++++++..+.|++| +|+|+-
T Consensus 159 ~~~~e~~~l~~~~~~~~~~~~~~LafdH~~Il~~al~rlr~kl~y~~i~~---~llp~~ 214 (273)
T 2fml_A 159 TLSHEDVEITLDLKTAASLGKDTLAFDHSEIIIKAFNRVVDKMEHEPQVL---QVLGKD 214 (273)
T ss_dssp EEEETTEEEEEETTTCCBCSSSCCSTTHHHHHHHHHHHHHHHTTTCCGGG---GGGCSC
T ss_pred ccccchhhhccccccccccCCCcccccHHHHHHHHHHHHHHHhcCCcHHH---HhCCcc
Confidence 135899999999999999999999999988 788764
No 3
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.74 E-value=7.3e-18 Score=155.92 Aligned_cols=146 Identities=14% Similarity=0.102 Sum_probs=108.3
Q ss_pred ccCCCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 140 RWGPNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 140 rwGPNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
.+-|..++++||++... ..++||+++| .|.|+||||+|++||++.+||+||+.||||+.+.
T Consensus 9 ~~~p~v~v~~vi~~~~~--------------~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~ 74 (226)
T 2fb1_A 9 NPTFYLGIDCIIFGFNE--------------GEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENV 74 (226)
T ss_dssp SCCEEEEEEEEEEEEET--------------TEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSC
T ss_pred CCCCeEEEEEEEEEEeC--------------CCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCC
Confidence 45688999999998642 1258999998 4889999999999999999999999999999765
Q ss_pred cchhhhHHHHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCCC
Q psy13138 215 MTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMTF 294 (362)
Q Consensus 215 ~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lpL 294 (362)
.. + ...+|.....| ...|+.+++|.+....+. ....+++..+++|+++++-..+
T Consensus 75 ~~-----------~------~l~~~~~~~r~----~~~~~v~~~y~a~~~~~~-----~~~~~~e~~~~~W~~~~el~~l 128 (226)
T 2fb1_A 75 YM-----------E------QVGAFGAIDRD----PGERVVSIAYYALININE-----YDRELVQKHNAYWVNINELPAL 128 (226)
T ss_dssp EE-----------E------EEEEECCTTSS----SSSCEEEEEEEEECCTTS-----SCHHHHHHTTEEEEETTSCCCB
T ss_pred ce-----------E------EEEEeCCCCcC----CCceEEEEEEEEEecCcc-----cccCCccccceEEEEHHHhhhc
Confidence 21 1 12333211112 235777777776654332 1123456778999999943348
Q ss_pred CcCHHHHHHHHHHHhcCccccceeeeecCCcccc
Q psy13138 295 NPTHKTFMKVVTDIHGAHWYAYVIGLNSWNLTSA 328 (362)
Q Consensus 295 ~asH~~iL~~a~~~~~a~~~~~pigf~~~~l~~~ 328 (362)
.++|..||+.+.+.+++...+.+++| .++|+
T Consensus 129 ~~dh~~il~~a~~rlr~~~~y~~i~~---~llp~ 159 (226)
T 2fb1_A 129 IFDHPEMVDKAREMMKQKASVEPIGF---NLLPK 159 (226)
T ss_dssp STTHHHHHHHHHHHHHHHHHHSGGGG---GGSCS
T ss_pred cCCHHHHHHHHHHHHHhhcccCchHH---HhCCc
Confidence 88999999999999999999999987 67664
No 4
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.73 E-value=3.5e-18 Score=159.50 Aligned_cols=146 Identities=16% Similarity=0.195 Sum_probs=109.4
Q ss_pred CCCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe-----CCeeeCceeecCC--CCCHHHHHHHHHHHHhccccc
Q psy13138 142 GPNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF-----NGEWGIPGGFIEG--KETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 142 GPNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR-----~g~WaLPGG~Vd~--GEsl~~aa~REl~EEtGl~~~ 214 (362)
-|..++++||.+... ..++||+++| .|.|+||||+|++ ||++.+||+||+.||||+.+.
T Consensus 20 ~p~v~v~~vi~~~~~--------------~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~ 85 (240)
T 3gz5_A 20 AQLLTVDAVLFTYHD--------------QQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPP 85 (240)
T ss_dssp -CEEEEEEEEEEEET--------------TEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCS
T ss_pred CCccEEEEEEEEEeC--------------CCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCC
Confidence 367899999998642 1378999998 4899999999999 999999999999999999764
Q ss_pred cchhhhHHHHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCC--C
Q psy13138 215 MTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSD--M 292 (362)
Q Consensus 215 ~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~--l 292 (362)
.. + ...+|.....|| ..|+.+++|.+....+.. .. ..++..+++|+++++- .
T Consensus 86 ~~-----------~------~l~~~~~~~r~~----~~~~~~~~y~a~~~~~~~----~~-~~~e~~~~~W~~~~el~~~ 139 (240)
T 3gz5_A 86 YI-----------E------QLCTVGNNSRDA----RGWSVTVCYTALMSYQAC----QI-QIASVSDVKWWPLADVLQM 139 (240)
T ss_dssp EE-----------E------EEEEEEESSSST----TSCEEEEEEEEECCHHHH----HH-HHTTCTTEEEEEHHHHTTS
T ss_pred ce-----------e------eEEEeCCCccCC----CceEEEEEEEEEeccccc----CC-CCCcccceEEecHHHcccC
Confidence 21 1 133443222233 357888888766543321 11 2456778999999942 3
Q ss_pred CCCcCHHHHHHHHHHHhcCccccceeeeecCCcccccc
Q psy13138 293 TFNPTHKTFMKVVTDIHGAHWYAYVIGLNSWNLTSATV 330 (362)
Q Consensus 293 pL~asH~~iL~~a~~~~~a~~~~~pigf~~~~l~~~~~ 330 (362)
+|.++|+.||+.+.++++....+.+|+| .|+|+..
T Consensus 140 ~l~~dh~~il~~a~~rlr~kl~y~~i~~---~llp~~F 174 (240)
T 3gz5_A 140 PLAFDHLQLIEQARERLTQKALYSLVPG---FALSEPF 174 (240)
T ss_dssp CCSTTHHHHHHHHHHHHHHHHHHCSGGG---GGSCSSB
T ss_pred CcchhHHHHHHHHHHHHHHhcccCcHHH---HhCCCCc
Confidence 5999999999999999999999999987 7887643
No 5
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.71 E-value=2.6e-17 Score=139.82 Aligned_cols=111 Identities=17% Similarity=0.238 Sum_probs=76.8
Q ss_pred EEEEEEe-CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCcc
Q psy13138 174 EFVTVKF-NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNA 252 (362)
Q Consensus 174 evLlIkR-~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnA 252 (362)
+||+++| .|.|+||||+||+||++.+||+||+.||||+.+... .++ +...|. |. .+.+..
T Consensus 16 ~vLL~~r~~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~------------~~l---~~~~~~-~~---~~~~~~ 76 (134)
T 3i7u_A 16 EVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL------------DYI---GEIHYW-YT---LKGERI 76 (134)
T ss_dssp EEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE------------EEE---EEEEEE-EE---ETTEEE
T ss_pred EEEEEEeCCCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEe------------eee---eeeeEE-ec---CCCceE
Confidence 5899999 999999999999999999999999999999987531 011 111111 11 111112
Q ss_pred EEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC---CCcCHHHHHHHHHHHhc
Q psy13138 253 WVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT---FNPTHKTFMKVVTDIHG 310 (362)
Q Consensus 253 Wietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp---L~asH~~iL~~a~~~~~ 310 (362)
...+.+|.+...++ .+.+++|..+++|+++++ ++ .+++++.+|+++.+.+.
T Consensus 77 ~~~~~~f~~~~~~~------~~~~~~E~~~~~W~~~~e-~~~~l~~~~~r~il~~a~~l~~ 130 (134)
T 3i7u_A 77 FKTVKYYLMKYKEG------EPRPSWEVKDAKFFPIKE-AKKLLKYKGDKEIFEKALKLKE 130 (134)
T ss_dssp EEEEEEEEEEEEEE------CCCCCTTSSEEEEEEHHH-HHHHBCSHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEEcCC------cCcCChhheEEEEEEHHH-HhhhcCChHHHHHHHHHHHHHH
Confidence 23334455554444 344567888999999994 43 57889999999987654
No 6
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.63 E-value=1.3e-15 Score=131.18 Aligned_cols=134 Identities=15% Similarity=0.117 Sum_probs=83.2
Q ss_pred cceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe---CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHH
Q psy13138 146 SAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF---NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKS 222 (362)
Q Consensus 146 Aad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR---~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~ 222 (362)
|+..||+|-.. +....+ ..+||||+|| .|.|.||||+||+||++.+||+||+.||||+.+...
T Consensus 5 a~G~iifr~~~------~~~~~n--~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~------ 70 (155)
T 3u53_A 5 ACGLIIFRRCL------IPKVDN--NAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQL------ 70 (155)
T ss_dssp EEEEEEEEECC------CSSSSS--CSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGE------
T ss_pred EeEEEEEcccc------ccceeC--CCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCccccc------
Confidence 67788887311 101112 2479999999 678999999999999999999999999999976531
Q ss_pred HHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC--CCcCHHH
Q psy13138 223 ILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT--FNPTHKT 300 (362)
Q Consensus 223 ~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp--L~asH~~ 300 (362)
.+ ...+......+ . .........|.+....+. ..+..++|..+++|+++++... .+.+.+.
T Consensus 71 ------~~-----~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~----~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~ 133 (155)
T 3u53_A 71 ------TI-----IEGFKRELNYV-A-RNKPKTVIYWLAEVKDYD----VEIRLSHEHQAYRWLGLEEACQLAQFKEMKA 133 (155)
T ss_dssp ------EE-----EEEEEEEEEEE-E-TTEEEEEEEEEEEESCTT----CCCCCCTTEEEEEEECHHHHHHHHCSHHHHH
T ss_pred ------ee-----eeeEeeeeecC-C-CcceeEEEEEEEEEeccC----CccCCCcceeEEEEeEHHHHHHHcCCHHHHH
Confidence 01 11111110000 0 111223333444443321 2344567888999999995333 5677888
Q ss_pred HHHHHHHHhc
Q psy13138 301 FMKVVTDIHG 310 (362)
Q Consensus 301 iL~~a~~~~~ 310 (362)
+|+++.+.+.
T Consensus 134 ~L~~a~~~L~ 143 (155)
T 3u53_A 134 ALQEGHQFLC 143 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9988776553
No 7
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.63 E-value=5.8e-16 Score=137.84 Aligned_cols=137 Identities=18% Similarity=0.305 Sum_probs=95.8
Q ss_pred CC-ccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe------------CCeeeCceeecCCCCCHHHHHHHHHHHHh
Q psy13138 143 PN-HSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF------------NGEWGIPGGFIEGKETYMDRGRKEFLEEA 209 (362)
Q Consensus 143 PN-hAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR------------~g~WaLPGG~Vd~GEsl~~aa~REl~EEt 209 (362)
|- .++++||++...+. +.+..+||+++| .|.|+||||+|++||++.+||+||+.|||
T Consensus 25 p~~~~v~~vv~~~~~~~----------~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEt 94 (187)
T 3i9x_A 25 PDGYTSDMILTTVKELN----------GKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEET 94 (187)
T ss_dssp CSEEEEEEEEEEEEEET----------TEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHH
T ss_pred cccceEEEEEEEEcCCC----------CCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHH
Confidence 55 78999999875421 111357899987 47899999999999999999999999999
Q ss_pred ccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecC
Q psy13138 210 LNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVH 289 (362)
Q Consensus 210 Gl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd 289 (362)
|+.+... . ...+| .++...++.|+.+.+|.+....... ..+..+++..+++|++++
T Consensus 95 Gl~~~~~------------~-----~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~E~~~~~W~~~~ 150 (187)
T 3i9x_A 95 SLTDIPL------------I-----PFGVF----DKPGRDPRGWIISRAFYAIVPPEAL---EKRAAGDDAAEIGLFPMT 150 (187)
T ss_dssp CCCSCCC------------E-----EEEEE----CCTTSSTTSSEEEEEEEEECCHHHH---HHHHHSTTTTTEEEEEHH
T ss_pred CCCCcce------------E-----EEEEE----cCCccCCCCCEEEEEEEEEEcCccc---CCcCCCCceeEEEEEeHH
Confidence 9976431 0 12233 2333334467777777655432210 012235677889999999
Q ss_pred C--CCCCCcCHHHHHHHHHHHhcCcc
Q psy13138 290 S--DMTFNPTHKTFMKVVTDIHGAHW 313 (362)
Q Consensus 290 ~--~lpL~asH~~iL~~a~~~~~a~~ 313 (362)
+ .+++.++|+.+|+.+.+.++...
T Consensus 151 el~~~~l~~~~~~il~~a~~~l~~~~ 176 (187)
T 3i9x_A 151 EALELPLAFDHLDMLKKAFSAITEEF 176 (187)
T ss_dssp HHTTSCBSTTHHHHHHHHHHHHHHHH
T ss_pred HcccCCCCccHHHHHHHHHHHHHhhh
Confidence 5 23589999999999999887654
No 8
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.62 E-value=8.8e-15 Score=123.07 Aligned_cols=125 Identities=21% Similarity=0.206 Sum_probs=86.8
Q ss_pred CCCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe---CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchh
Q psy13138 142 GPNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF---NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAK 218 (362)
Q Consensus 142 GPNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR---~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~ 218 (362)
-|..++.+||.+... + ++ .++|+++| .+.|.||||++++||++.+||+||+.||||+.+...
T Consensus 7 ~p~~~v~~vi~~~~~--~---------~~--~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-- 71 (139)
T 2yyh_A 7 TPLLATDVIIRLWDG--E---------NF--KGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLH-- 71 (139)
T ss_dssp CCEEEEEEEEEEEET--T---------EE--EEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEE--
T ss_pred CCeEEEEEEEEEEcC--C---------Cc--EEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccc--
Confidence 467788888887532 1 21 13889998 356999999999999999999999999999976531
Q ss_pred hhHHHHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCC--CCCc
Q psy13138 219 ESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDM--TFNP 296 (362)
Q Consensus 219 ~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~l--pL~a 296 (362)
. -..++. .+...+..+....+|.+.. .+ .+...++..+++|+++++-. .+..
T Consensus 72 ----------~-----~~~~~~----~~~~~~~~~~~~~~f~~~~-~~------~~~~~~e~~~~~W~~~~el~~~~l~~ 125 (139)
T 2yyh_A 72 ----------K-----LMGVYS----DPERDPRAHVVSVVWIGDA-QG------EPKAGSDAKKVKVYRLEEIPLDKLVF 125 (139)
T ss_dssp ----------E-----EEEEEC----CTTSCTTSCEEEEEEEEEE-ES------CCCCCTTEEEEEEECTTSCCGGGBCT
T ss_pred ----------e-----EEEEEC----CCCcCCCceEEEEEEEEec-CC------ccCCCCCcceEEEEEHHHCCHhhcCC
Confidence 0 122332 2222222345566666665 33 23345677899999999655 5888
Q ss_pred CHHHHHHHHHH
Q psy13138 297 THKTFMKVVTD 307 (362)
Q Consensus 297 sH~~iL~~a~~ 307 (362)
+|+.+|+.+.+
T Consensus 126 ~~~~~l~~~l~ 136 (139)
T 2yyh_A 126 DHKKIILDFLK 136 (139)
T ss_dssp THHHHHHHHHH
T ss_pred CHHHHHHHHHh
Confidence 89999988765
No 9
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.54 E-value=7.7e-14 Score=118.64 Aligned_cols=121 Identities=12% Similarity=0.124 Sum_probs=80.1
Q ss_pred eEEEEEEe--CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCC
Q psy13138 173 LEFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTD 250 (362)
Q Consensus 173 LevLlIkR--~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTD 250 (362)
.++|+++| .|.|.||||++++||++.+||+||+.||||+.+... ...+. ....+..+. -..++
T Consensus 20 ~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~-----------~~~~~--~~~~~~~~~--~~~~~ 84 (149)
T 3son_A 20 YQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVK-----------MYSLD--SHASIPNFH--FSFNK 84 (149)
T ss_dssp EEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCC-----------EEEEE--EEEEEEGGG--TCSSS
T ss_pred eEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccc-----------eEEEE--eeeccccee--eccCC
Confidence 47999999 699999999999999999999999999999987531 00000 111111111 11122
Q ss_pred ccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHHhcCc
Q psy13138 251 NAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDIHGAH 312 (362)
Q Consensus 251 nAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~~~a~ 312 (362)
.......+|.+...... + .+...++..+++|+++++ ++.++++++.+|+.+.+.+..+
T Consensus 85 ~~~~~~~~f~~~~~~~~--~--~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 144 (149)
T 3son_A 85 PYVVPEYCFAIDLTSCS--Y--QVTLSLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKNN 144 (149)
T ss_dssp CSEEEEEEEEEECTTTG--G--GCCCCTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHTT
T ss_pred ceEeEEEEEEEEcCCCC--C--cccCCCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 22333455666654211 1 222246788899999994 2337889999999999887665
No 10
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.47 E-value=1.2e-13 Score=114.61 Aligned_cols=113 Identities=15% Similarity=0.170 Sum_probs=74.5
Q ss_pred EEEEEEe-CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCcc
Q psy13138 174 EFVTVKF-NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNA 252 (362)
Q Consensus 174 evLlIkR-~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnA 252 (362)
++|+++| .|.|.||||++++||++.+||.||+.||||+.+... .+ ...+.....++. ...
T Consensus 16 ~vLl~~r~~~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~------------~~-----~~~~~~~~~~~~--~~~ 76 (134)
T 2pbt_A 16 EVLLIKTPSNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEIL------------DY-----IGEIHYWYTLKG--ERI 76 (134)
T ss_dssp EEEEEECTTSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEE------------EE-----EEEEEEEEEETT--EEE
T ss_pred EEEEEEeCCCcEECCccccCCCCCHHHHHHHHHHHHHCCccEEe------------ee-----eeEEEEEeeCCC--cEE
Confidence 6899999 899999999999999999999999999999986531 01 111111111111 111
Q ss_pred EEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHHhcC
Q psy13138 253 WVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDIHGA 311 (362)
Q Consensus 253 Wietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~~~a 311 (362)
.....+|.+...++ .+...++..+++|+++++ ++.++..++.+|+.+.+.+..
T Consensus 77 ~~~~~~~~~~~~~~------~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 131 (134)
T 2pbt_A 77 FKTVKYYLMKYKEG------EPRPSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EEEEEEEEEEEEEE------CCCCCTTSSEEEEEEHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEecCC------CcCCCcceeEEEEEcHHHHHhhhcchhHHHHHHHHHHHhhh
Confidence 22233444444333 222334778899999994 223677888999999887643
No 11
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.47 E-value=2.9e-13 Score=113.04 Aligned_cols=112 Identities=14% Similarity=0.190 Sum_probs=74.6
Q ss_pred eEEEEEEe---CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhcc-CceEEEecccccCCC
Q psy13138 173 LEFVTVKF---NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDD-NCHFVYRGYMKDERN 248 (362)
Q Consensus 173 LevLlIkR---~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~-~g~~vy~gyvdDpRN 248 (362)
.++|+++| .|.|.||||++++||++.+||+||+.||||+.+... .+... .+...| . .+
T Consensus 18 ~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~------------~~~~~~~~~~~~---~-~~-- 79 (138)
T 1ktg_A 18 IEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQL------------TIHEDCHETLFY---E-AK-- 79 (138)
T ss_dssp EEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGE------------EEEEEEEEEEEE---E-ET--
T ss_pred cEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccce------------EEeccccceEEE---E-eC--
Confidence 47899998 459999999999999999999999999999964321 00000 011111 1 11
Q ss_pred CCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC---CCcCHHHHHHHHHHHhc
Q psy13138 249 TDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT---FNPTHKTFMKVVTDIHG 310 (362)
Q Consensus 249 TDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp---L~asH~~iL~~a~~~~~ 310 (362)
.......+|.+....+. .....++..+++|++++ +++ ++.+++.+|+++.+.++
T Consensus 80 --~~~~~~~~f~~~~~~~~-----~~~~~~e~~~~~W~~~~-el~~~~~~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 80 --GKPKSVKYWLAKLNNPD-----DVQLSHEHQNWKWCELE-DAIKIADYAEMGSLLRKFSAFLA 136 (138)
T ss_dssp --TEEEEEEEEEEEECSCC-----CCCCCTTEEEEEEECHH-HHHHHHCCHHHHHHHHHHHHHHH
T ss_pred --CCceEEEEEEEEecCCc-----ccCCCchhcEeEeccHH-HHHHhhccchHHHHHHHHHHHhh
Confidence 12344455665554421 22335677889999999 444 67788899999888764
No 12
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.46 E-value=5.3e-13 Score=120.91 Aligned_cols=113 Identities=15% Similarity=0.192 Sum_probs=76.5
Q ss_pred EEEEEEe--CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCc
Q psy13138 174 EFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDN 251 (362)
Q Consensus 174 evLlIkR--~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDn 251 (362)
++|+++| .|.|+||||++|+||++.+||+||+.||||+.+... . -..++.....+..+. .
T Consensus 80 ~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~------------~-----~l~~~~~~~~~~~~~-~ 141 (205)
T 3q1p_A 80 KLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHF------------K-----LLAIFDKEKHQPSPS-A 141 (205)
T ss_dssp EEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE------------E-----EEEEEEHHHHSCCCC-S
T ss_pred EEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccc------------e-----EEEEEeccccCCCCC-C
Confidence 6889998 799999999999999999999999999999986531 0 112221111111111 1
Q ss_pred cEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC---CCcCHHHHHHHHHHHhcC
Q psy13138 252 AWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT---FNPTHKTFMKVVTDIHGA 311 (362)
Q Consensus 252 AWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp---L~asH~~iL~~a~~~~~a 311 (362)
..+..++|.+...++ .+..+++..+++|++++ +++ +..+.+++|+.+.+....
T Consensus 142 ~~~~~~~~~~~~~~~------~~~~~~E~~~~~w~~~~-el~~l~~~~~~~~~i~~~~~~~~~ 197 (205)
T 3q1p_A 142 THVYKIFIGCEIIGG------EKKTSIETEEVEFFGEN-ELPNLSIARNTEDQIKEMFAYMKD 197 (205)
T ss_dssp SCEEEEEEEEEEEEE------CCCCCTTSCCEEEECTT-SCCCBCTTTCCHHHHHHHHHHHHC
T ss_pred ceEEEEEEEEEecCC------ccCCCCcceEEEEEeHH-HhhhcCCCccHHHHHHHHHHHHhC
Confidence 224455565555444 33445778899999999 554 677888888888776544
No 13
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.45 E-value=4.7e-13 Score=128.81 Aligned_cols=117 Identities=18% Similarity=0.233 Sum_probs=75.0
Q ss_pred EEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCC
Q psy13138 174 EFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERN 248 (362)
Q Consensus 174 evLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRN 248 (362)
++|+++| .|.|+||||+||+||++.+||+||+.||||+.+... .+...+. ....| +.|..
T Consensus 215 ~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~---------~~~~~~~--~~~~~----~~~~~ 279 (341)
T 2qjo_A 215 HVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLP---------VLRGSIV--DSHVF----DAPGR 279 (341)
T ss_dssp EEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHH---------HHHHTEE--EEEEE----CCTTS
T ss_pred EEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccc---------ccccccc--ceEEE----eCCCC
Confidence 5889988 488999999999999999999999999999987531 1111111 12333 22332
Q ss_pred CCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CC--CCCcCHHHHHHHHHHH
Q psy13138 249 TDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DM--TFNPTHKTFMKVVTDI 308 (362)
Q Consensus 249 TDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~l--pL~asH~~iL~~a~~~ 308 (362)
....+..+.+|.+....+.. ..+..++|..+++|+++++ ++ +++++|+.+|+++++.
T Consensus 280 ~~~~~~~~~~f~~~~~~~~~---~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~~~ 340 (341)
T 2qjo_A 280 SLRGRTITHAYFIQLPGGEL---PAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFVSK 340 (341)
T ss_dssp CTTSCEEEEEEEEECCSSSC---CCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC--
T ss_pred CCCCcEEEEEEEEEecCCCc---CccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHHhc
Confidence 23345666677766544421 1223456778999999995 23 4799999999987654
No 14
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.45 E-value=1e-12 Score=127.24 Aligned_cols=121 Identities=20% Similarity=0.332 Sum_probs=83.1
Q ss_pred EEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCC
Q psy13138 174 EFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERN 248 (362)
Q Consensus 174 evLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRN 248 (362)
++|+++| .|.|+||||+||+||++.+||+||+.||||+.+... .+...+. ....| ..|..
T Consensus 220 ~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~---------~~~~~~~--~~~~~----~~~~~ 284 (352)
T 2qjt_B 220 HILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHE---------QLAIAKR--CEKVF----DYPDR 284 (352)
T ss_dssp EEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHH---------HHHHHEE--EEEEE----CCTTS
T ss_pred EEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccc---------hhcceee--eeEEe----cCCCC
Confidence 5889998 388999999999999999999999999999987531 1111111 12333 23333
Q ss_pred CCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEec-CC--CC--CCCcCHHHHHHHHHHHhcC
Q psy13138 249 TDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIV-HS--DM--TFNPTHKTFMKVVTDIHGA 311 (362)
Q Consensus 249 TDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~v-d~--~l--pL~asH~~iL~~a~~~~~a 311 (362)
....+..+.+|.+....+.. ...+...+|..+++|+++ ++ ++ +++++|+.+|+++.+.++.
T Consensus 285 ~~~~~~~~~~f~~~~~~~~~--~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~~~l~~ 350 (352)
T 2qjt_B 285 SVRGRTISHVGLFVFDQWPS--LPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLEECGK 350 (352)
T ss_dssp CTTSEEEEEEEEEEECSCSS--CCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHHHHTC-
T ss_pred CCCccEEEEEEEEEEeCCCC--CCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHHHHhcc
Confidence 33345666677666554421 112334577889999999 74 23 4789999999999988743
No 15
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.44 E-value=6.1e-13 Score=114.83 Aligned_cols=107 Identities=22% Similarity=0.292 Sum_probs=71.7
Q ss_pred EEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCC
Q psy13138 174 EFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERN 248 (362)
Q Consensus 174 evLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRN 248 (362)
+||+++| .|.|.||||.+++||++.+||+||+.||||+.+... .+ ..++.....+
T Consensus 41 ~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~------------~~-----~~~~~~~~~~--- 100 (157)
T 4dyw_A 41 RILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERA------------TL-----LCVVDHIDAA--- 100 (157)
T ss_dssp EEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESC------------EE-----EEEEEEEETT---
T ss_pred EEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccC------------cE-----EEEEEeeccC---
Confidence 5889988 488999999999999999999999999999987531 11 1222111111
Q ss_pred CCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC--CCcCHHHHHHHHH
Q psy13138 249 TDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT--FNPTHKTFMKVVT 306 (362)
Q Consensus 249 TDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp--L~asH~~iL~~a~ 306 (362)
+.......+|.+....+. ......++..+++|++++ +++ +...++.+|+.+.
T Consensus 101 -~~~~~~~~~f~~~~~~~~----~~~~~~~E~~~~~W~~~~-el~~~l~~~~~~~l~~l~ 154 (157)
T 4dyw_A 101 -NGEHWVAPVYLAHAFSGE----PRVVEPDRHEALGWFALD-DLPQPLTHATRIALEQVT 154 (157)
T ss_dssp -TTEEEEEEEEEESEEESC----CCCSCTTTEEEEEEEETT-SCCSSBCHHHHHHHHHHC
T ss_pred -CCcEEEEEEEEEEEcCCC----cccCCCCcEeEEEEECHH-HcccccCHHHHHHHHHHH
Confidence 122344455555443332 122334667889999999 554 7778888887653
No 16
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.44 E-value=4.5e-13 Score=114.38 Aligned_cols=109 Identities=13% Similarity=0.181 Sum_probs=70.5
Q ss_pred CeeEEEEEEe-C---CeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccC
Q psy13138 171 PLLEFVTVKF-N---GEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDE 246 (362)
Q Consensus 171 ~vLevLlIkR-~---g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDp 246 (362)
..+.+|+++| . ..|.||||++++||++.+||+||+.||||+.+... .+ ..++. +.
T Consensus 21 ~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~------------~~-----~~~~~-~~--- 79 (155)
T 2b06_A 21 QRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNP------------QL-----VGIKN-WP--- 79 (155)
T ss_dssp TEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESC------------EE-----EEEEE-EE---
T ss_pred CeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCC------------cE-----EEEEe-ec---
Confidence 4577888888 2 12799999999999999999999999999976531 01 11111 11
Q ss_pred CCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHH
Q psy13138 247 RNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDI 308 (362)
Q Consensus 247 RNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~ 308 (362)
.++.......+|.+....+ .+.. ++..+++|+++++ ++++..+|+.+++.+.+.
T Consensus 80 -~~~~~~~~~~~~~~~~~~~------~~~~-~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 135 (155)
T 2b06_A 80 -LDTGGRYIVICYKATEFSG------TLQS-SEEGEVSWVQKDQIPNLNLAYDMLPLMEMMEAP 135 (155)
T ss_dssp -CTTSCEEEEEEEEECEEEE------CCCC-BTTBEEEEEEGGGGGGSCBCTTHHHHHHHHHCT
T ss_pred -cCCCceEEEEEEEEEecCC------CCCC-CcceeeEEeeHHHhhhCCCChhHHHHHHHHhCC
Confidence 1122344455555443332 2222 3567899999995 234778999999876643
No 17
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.43 E-value=2.9e-13 Score=121.10 Aligned_cols=113 Identities=16% Similarity=0.283 Sum_probs=73.4
Q ss_pred EEEEEEe--CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCc
Q psy13138 174 EFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDN 251 (362)
Q Consensus 174 evLlIkR--~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDn 251 (362)
+||+++| .|.|.||||+|++||++.+||+||+.||||+.+... ++ ..++.....+......
T Consensus 16 ~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~------------~~-----~~~~~~~~~~~~~~~~ 78 (188)
T 3fk9_A 16 QVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNP------------EL-----KGIFSMVIFDEGKIVS 78 (188)
T ss_dssp EEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSC------------EE-----EEEEEEEEEETTEEEE
T ss_pred EEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCc------------eE-----EEEEEEEecCCCcceE
Confidence 5899998 899999999999999999999999999999986531 01 1222211111110001
Q ss_pred cEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHHhc
Q psy13138 252 AWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDIHG 310 (362)
Q Consensus 252 AWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~~~ 310 (362)
.| ...+|.+....+ .+...++..+++|+++++ ++++.++++.+|+.+++..+
T Consensus 79 ~~-~~~~f~a~~~~~------~~~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~l~~~~ 132 (188)
T 3fk9_A 79 EW-MLFTFKATEHEG------EMLKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHSDR 132 (188)
T ss_dssp EE-EEEEEEESCEES------CCCSEETTEEEEEEEGGGGGGSCCCHHHHHHHHHHTTCCS
T ss_pred EE-EEEEEEEECCCC------CCcCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHHHHcCCC
Confidence 11 233333333233 222233446899999995 34588999999999977643
No 18
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.43 E-value=1e-12 Score=111.88 Aligned_cols=122 Identities=14% Similarity=0.250 Sum_probs=77.5
Q ss_pred cCCCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccc
Q psy13138 141 WGPNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMT 216 (362)
Q Consensus 141 wGPNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s 216 (362)
|-|..++.+||.+ ++ ++|+++| .|.|.||||++++||++.+||+||+.||||+.+...
T Consensus 2 ~~p~~~v~~ii~~--------------~~----~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~ 63 (153)
T 3shd_A 2 FKPHVTVACVVHA--------------EG----KFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQ 63 (153)
T ss_dssp CCCEEEEEEEEEE--------------TT----EEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC
T ss_pred CCCceEEEEEEEe--------------CC----EEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccC
Confidence 4466677666664 12 5888887 567999999999999999999999999999987531
Q ss_pred hhhhHHHHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCC---C
Q psy13138 217 AKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDM---T 293 (362)
Q Consensus 217 ~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~l---p 293 (362)
.++ +...| ..+ +.......+|.+....+.. ..+ ..++..+++|++++ ++ +
T Consensus 64 ------------~~~---~~~~~----~~~---~~~~~~~~~f~~~~~~~~~---~~~-~~~E~~~~~W~~~~-el~~~~ 116 (153)
T 3shd_A 64 ------------HFI---RMHQW----IAP---DKTPFLRFLFAIELEQICP---TQP-HDSDIDCCRWVSAE-EILQAS 116 (153)
T ss_dssp ------------EEE---EEEEE----CCT---TSCCEEEEEEEEECSSCCC---CCC-CSTTCCEEEEECHH-HHHTCS
T ss_pred ------------cEE---EEEEE----ecC---CCceEEEEEEEEEccccCc---CCC-CcccceeeEEecHH-Hhhccc
Confidence 111 12212 111 2223445566666544321 122 24567889999999 55 2
Q ss_pred --CCcCHHHHHHHHHH
Q psy13138 294 --FNPTHKTFMKVVTD 307 (362)
Q Consensus 294 --L~asH~~iL~~a~~ 307 (362)
..+..+.+|+..++
T Consensus 117 ~~~~~~~~~~l~~~~~ 132 (153)
T 3shd_A 117 NLRSPLVAESIRCYQS 132 (153)
T ss_dssp CBSSTHHHHHHHHHHH
T ss_pred cccCchHHHHHHHHHh
Confidence 34455555555544
No 19
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.42 E-value=3e-12 Score=110.19 Aligned_cols=108 Identities=14% Similarity=-0.080 Sum_probs=64.6
Q ss_pred EEEEEEe--CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEe--cccccCCCC
Q psy13138 174 EFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYR--GYMKDERNT 249 (362)
Q Consensus 174 evLlIkR--~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~--gyvdDpRNT 249 (362)
++|+++| .|.|.||||+|++||++.+||+||+.||||+.+.....-. +......-+.. + ..+. .........
T Consensus 18 ~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~--~~~~~~~~~~~-~-~~~~~p~~~~~~~~~ 93 (159)
T 3f6a_A 18 KVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPID--INLKKSCDLSG-E-KLLINPIHTILGDVS 93 (159)
T ss_dssp EEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCC--HHHHHHHHHTT-C-EEECCCSEEEEECSS
T ss_pred EEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceeccccc--ccccccccccc-c-ccccCccccccccCC
Confidence 6889998 7999999999999999999999999999999876321000 00000000000 1 1110 000000111
Q ss_pred CccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC
Q psy13138 250 DNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS 290 (362)
Q Consensus 250 DnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~ 290 (362)
...|....+|.+....+. ..+ ..++..+++|+++++
T Consensus 94 ~~~~~~~~~f~~~~~~~~----~~~-~~~E~~~~~W~~~~e 129 (159)
T 3f6a_A 94 PNHSHIDFVYYATTTSFE----TSP-EIGESKILKWYSKED 129 (159)
T ss_dssp SSSCEEEEEEEEECSCSC----CCC-CTTSCCCEEEECSSS
T ss_pred CCceEEEEEEEEEeCCCC----cCC-CCCcccceEEeeHHH
Confidence 234566667777765552 122 356778899999994
No 20
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.42 E-value=1.3e-12 Score=114.58 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=72.3
Q ss_pred EEEEEEe-CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCcc
Q psy13138 174 EFVTVKF-NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNA 252 (362)
Q Consensus 174 evLlIkR-~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnA 252 (362)
++|+++| .|.|+||||+|++||++.+||+||+.||||+.+... . ....| .++.
T Consensus 28 ~vLL~~r~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~-----------~------~l~~~----~~~~----- 81 (163)
T 3f13_A 28 GVLVTASRGGRYNLPGGKANRGELRSQALIREIREETGLRINSM-----------L------YLFDH----ITPF----- 81 (163)
T ss_dssp EEEEEECC---BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEE-----------E------EEEEE----ECSS-----
T ss_pred EEEEEEECCCeEECCceeCCCCCCHHHHHHHHHHHHHCccccee-----------E------EEEEE----ecCC-----
Confidence 5888988 899999999999999999999999999999987531 0 11222 1121
Q ss_pred EEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC-CCCCCcCHHHHHHHHHHHhcCc
Q psy13138 253 WVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS-DMTFNPTHKTFMKVVTDIHGAH 312 (362)
Q Consensus 253 Wietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~-~lpL~asH~~iL~~a~~~~~a~ 312 (362)
....+|.+.. +| .+.+.+|..+++|++.+. .+++.++|+.+|+.+.+.+...
T Consensus 82 -~~~~~f~~~~-~~------~~~~~~E~~~~~W~~~~~~~~~l~~~~~~il~~~~~~~~~~ 134 (163)
T 3f13_A 82 -NAHKVYLCIA-QG------QPKPQNEIERIALVSSPDTDMDLFVEGRAILRRYARLRNEE 134 (163)
T ss_dssp -EEEEEEEEEC--C------CCCCCTTCCEEEEESSTTCSSCBCHHHHHHHHHHHHHTTCS
T ss_pred -eEEEEEEEEE-CC------cCccCCCceEEEEECcccccCCCCHHHHHHHHHHHHhhhcc
Confidence 3344555543 33 344455788999999552 2358899999999998876543
No 21
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.42 E-value=1.3e-12 Score=118.34 Aligned_cols=113 Identities=14% Similarity=0.223 Sum_probs=76.1
Q ss_pred EEEEEEe-CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCcc
Q psy13138 174 EFVTVKF-NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNA 252 (362)
Q Consensus 174 evLlIkR-~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnA 252 (362)
++|+++| .|.|+||||++|+||++.+||+||+.||||+.+... . -..++........+. ..
T Consensus 82 ~vLLvrr~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~------------~-----~l~~~~~~~~~~~~~-~~ 143 (206)
T 3o8s_A 82 KILLVQENDGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQ------------R-----VVAILDKHKNNPAKS-AH 143 (206)
T ss_dssp EEEEEECTTSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEE------------E-----EEEEEEHHHHCC------
T ss_pred EEEEEEecCCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceee------------e-----EEEEEeccccCCCCC-Cc
Confidence 6899999 999999999999999999999999999999976531 0 111221110111111 12
Q ss_pred EEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC---CCcCHHHHHHHHHHHhcC
Q psy13138 253 WVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT---FNPTHKTFMKVVTDIHGA 311 (362)
Q Consensus 253 Wietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp---L~asH~~iL~~a~~~~~a 311 (362)
.+..++|.+....+ .+..+++..+++|++++ +++ +..+.+++|+.+.+.+..
T Consensus 144 ~~~~~~~~~~~~~~------~~~~~~E~~~~~w~~~~-el~~l~~~~~~~~~l~~~~~~~~~ 198 (206)
T 3o8s_A 144 RVTKVFILCRLLGG------EFQPNSETVASGFFSLD-DLPPLYLGKNTAEQLALCLEASRS 198 (206)
T ss_dssp CEEEEEEEEEEEEE------CCCCCSSCSEEEEECTT-SCCCBCTTTCCHHHHHHHHHHHHC
T ss_pred eEEEEEEEEEecCC------eecCCCCceEEEEEeHH-HhhhccCCCchHHHHHHHHHHHHC
Confidence 24455555555444 33445678899999999 444 667888999888876543
No 22
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.41 E-value=9.4e-13 Score=108.21 Aligned_cols=106 Identities=15% Similarity=0.199 Sum_probs=72.1
Q ss_pred EEEEEEe-CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCcc
Q psy13138 174 EFVTVKF-NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNA 252 (362)
Q Consensus 174 evLlIkR-~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnA 252 (362)
++|+++| .|.|.||||++++||++.+||.||+.||||+.+... .++ +...| .. +...
T Consensus 15 ~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~------------~~~---~~~~~---~~----~~~~ 72 (126)
T 1vcd_A 15 EVLLLRDRMGFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVL------------LPL---YPTRY---VN----PKGV 72 (126)
T ss_dssp CEEEEECTTSCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEE------------EEE---EEEEE---EC----TTSC
T ss_pred EEEEEEECCCCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeec------------cEE---eEEEE---ec----CCce
Confidence 5889999 899999999999999999999999999999986531 011 11111 11 1112
Q ss_pred EEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC---CCcCHHHHHHHHHHHh
Q psy13138 253 WVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT---FNPTHKTFMKVVTDIH 309 (362)
Q Consensus 253 Wietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp---L~asH~~iL~~a~~~~ 309 (362)
+ ...+|.+....+. ....++..+++|++++ +++ .+..++.+|+.+.+.+
T Consensus 73 ~-~~~~~~~~~~~~~------~~~~~e~~~~~w~~~~-el~~~~~~~~~~~~l~~~~~~l 124 (126)
T 1vcd_A 73 E-REVHWFLMRGEGA------PRLEEGMTGAGWFSPE-EARALLAFPEDLGLLEVALERL 124 (126)
T ss_dssp E-EEEEEEEEEEESC------CCCCTTCCEEEEECHH-HHHHHBCSHHHHHHHHHHHHHS
T ss_pred E-EEEEEEEEEcCCC------CCCCcceeeeEEcCHH-HHHHhhcChhHHHHHHHHHHhc
Confidence 2 3344555443332 2234567789999999 443 6677889998887654
No 23
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.40 E-value=6e-13 Score=112.59 Aligned_cols=111 Identities=17% Similarity=0.252 Sum_probs=76.5
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCC
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDER 247 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpR 247 (362)
++|+++| .|.|.||||++++||++.+||.||+.||||+.+... .++ +...+ .+
T Consensus 34 ~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~------------~~~---~~~~~-~~----- 92 (153)
T 3ees_A 34 KILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVG------------ELK---LACTH-SY----- 92 (153)
T ss_dssp EEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECC------------CEE---EEEEE-EE-----
T ss_pred EEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccC------------ceE---EEEEE-ec-----
Confidence 6889998 289999999999999999999999999999976531 011 11111 11
Q ss_pred CCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHHhcCccc
Q psy13138 248 NTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDIHGAHWY 314 (362)
Q Consensus 248 NTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~~~a~~~ 314 (362)
++..|. ..+|.+....+ .+. .++..+++|+++++ ++++...++.+|+.+.+.++..|.
T Consensus 93 -~~~~~~-~~~~~~~~~~~------~~~-~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~~wr 152 (153)
T 3ees_A 93 -GDVGIL-ILFYEILYWKG------EPR-AKHHMMLEWIHPEELKHRNIPEANRKILHKIYKALGLEWR 152 (153)
T ss_dssp -TTEEEE-EEEEEECEEES------CCC-CSSSSEEEEECGGGGGGSCCCHHHHTTHHHHHHHTTCC--
T ss_pred -CCCeEE-EEEEEEEECCC------CcC-CCccceEEEecHHHhhhCCCCcchHHHHHHHHHhhccccc
Confidence 122233 34455444333 222 34567899999995 345888999999999998887775
No 24
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.40 E-value=1.6e-12 Score=112.42 Aligned_cols=113 Identities=15% Similarity=0.254 Sum_probs=69.2
Q ss_pred EEEEEEe-------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHH-hccCceEEEeccccc
Q psy13138 174 EFVTVKF-------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETV-MDDNCHFVYRGYMKD 245 (362)
Q Consensus 174 evLlIkR-------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~l-fs~~g~~vy~gyvdD 245 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+.... +..+ +. ....+..|. +
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~---------~~~~~~~--~~~~~~~~~-~ 107 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSD---------ITPWTFR--DDIRIKTYA-D 107 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEE---------EEEEEEE--EEEEEEEC---
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccc---------eeeeeee--cceeeEecC-C
Confidence 5889988 2789999999999999999999999999999875310 0000 00 000011121 1
Q ss_pred CCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHH
Q psy13138 246 ERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVV 305 (362)
Q Consensus 246 pRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a 305 (362)
......++...+|.+....+ .+..++|..+++|+++++ ++++.+.++.+|+.+
T Consensus 108 -~~~~~~~~~~~~~~~~~~~~------~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~ 162 (165)
T 3oga_A 108 -GRQEEIYMIYLIFDCVSANR------DICINDEFQDYAWVKPEELALYDLNVATRHTLALK 162 (165)
T ss_dssp -CCEEEEEEEEEEEEEEESCC------CCCCCTTEEEEEEECGGGGGGSCBCHHHHHHHHHT
T ss_pred -CCceeEEEEEEEEEeeccCC------CccCCchheeeEEccHHHHhhCCCCHHHHHHHHHh
Confidence 11111122233444444433 233356778999999995 345778888888764
No 25
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.39 E-value=6.8e-12 Score=111.83 Aligned_cols=114 Identities=19% Similarity=0.243 Sum_probs=76.5
Q ss_pred EEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCC
Q psy13138 174 EFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERN 248 (362)
Q Consensus 174 evLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRN 248 (362)
+||+++| .|.|.||||+|++||++.+||+||+.||||+.+... ++ ..++. + +.
T Consensus 52 ~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~------------~~-----~~~~~-~---~~- 109 (189)
T 3cng_A 52 KVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIR------------EL-----YAVYS-L---PH- 109 (189)
T ss_dssp EEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE------------EE-----EEEEE-E---GG-
T ss_pred EEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCccccc------------ee-----EEEEe-c---CC-
Confidence 5888988 578999999999999999999999999999986531 11 11221 1 11
Q ss_pred CCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC---C-CcCHHHHHHHHHHHhcCccccceee
Q psy13138 249 TDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT---F-NPTHKTFMKVVTDIHGAHWYAYVIG 319 (362)
Q Consensus 249 TDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp---L-~asH~~iL~~a~~~~~a~~~~~pig 319 (362)
. .....+|.+....+. +...++..+++|++++ +++ + +...+.+|+.+++........-+.|
T Consensus 110 --~-~~~~~~f~~~~~~~~------~~~~~E~~~~~W~~~~-el~~~~l~~~~~~~~l~~~l~~~~~~~~~~y~g 174 (189)
T 3cng_A 110 --I-SQVYMLFRAKLLDLD------FFPGIESLEVRLFGEQ-EIPWNDIAFRVIHDPLKRYMEERHHGQPAFHLG 174 (189)
T ss_dssp --G-TEEEEEEEEEECCSC------CCCCTTEEEEEEECTT-TCCGGGBSCHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred --C-cEEEEEEEEEeCCCc------cCCCccceeEEEECHH-HcCcccccChHHHHHHHHHHHhccCCCcceEee
Confidence 1 234455666654442 2335677899999999 554 3 5667788888777665433333443
No 26
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.38 E-value=1.2e-12 Score=110.21 Aligned_cols=117 Identities=13% Similarity=0.056 Sum_probs=71.8
Q ss_pred EEEEEEe---CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEE---ecccccCC
Q psy13138 174 EFVTVKF---NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVY---RGYMKDER 247 (362)
Q Consensus 174 evLlIkR---~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy---~gyvdDpR 247 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+... .+ .++.......| ..+...-.
T Consensus 23 ~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~~~ 92 (150)
T 2o1c_A 23 RVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAE---------QL-TLIDCQRTVEFEIFSHLRHRYA 92 (150)
T ss_dssp EEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHH---------TC-CEEEEEEEEEEECCGGGGGGBC
T ss_pred EEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCcccc---------ce-eEEeeeceeeeeeecccccccC
Confidence 5788888 589999999999999999999999999999875320 00 01100000111 00000001
Q ss_pred CCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHH
Q psy13138 248 NTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTD 307 (362)
Q Consensus 248 NTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~ 307 (362)
+ +.......+|.+....+. .. ..++..+++|+++++ ++.+..+++.+|+++.+
T Consensus 93 ~-~~~~~~~~~f~~~~~~~~-----~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 147 (150)
T 2o1c_A 93 P-GVTRNTESWFCLALPHER-----QI-VFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVI 147 (150)
T ss_dssp T-TCCEEEEEEEEEEESSCC-----CC-CCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHTT
T ss_pred C-CCcceEEEEEEEEcCCCC-----Cc-ChhHhhccEeecHHHHHhhhcCHHHHHHHHHHHH
Confidence 1 112344555666654442 11 235677899999994 23477788888887764
No 27
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.38 E-value=2.2e-12 Score=111.02 Aligned_cols=115 Identities=17% Similarity=0.208 Sum_probs=71.5
Q ss_pred EEEEEEe--CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhcc-----C-ceEEEeccccc
Q psy13138 174 EFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDD-----N-CHFVYRGYMKD 245 (362)
Q Consensus 174 evLlIkR--~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~-----~-g~~vy~gyvdD 245 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+.... .+..+... + ....+..+...
T Consensus 13 ~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (156)
T 1k2e_A 13 KVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIG--------FTYGIIDENAVERPMPLVILEEVVKY 84 (156)
T ss_dssp EEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECC--------CCCCCBSSSEEECCCCSEEEEEEEEC
T ss_pred EEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceecc--------ceeeecccccccccccceeeeeeecC
Confidence 5889998 7899999999999999999999999999999875310 00000000 0 00001111111
Q ss_pred CCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHHhc
Q psy13138 246 ERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDIHG 310 (362)
Q Consensus 246 pRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~~~ 310 (362)
+. +..+....+|.+...+ .+..+++|+++++ +++++++++.+|+.+.+.+.
T Consensus 85 ~~--~~~~~~~~~f~~~~~~------------~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 137 (156)
T 1k2e_A 85 PE--ETHIHFDLIYLVKRVG------------GDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLY 137 (156)
T ss_dssp SS--CEEEEEEEEEEEEEEE------------ECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHH
T ss_pred CC--CceEEEEEEEEEEecC------------CcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 21 1223333334443221 2345789999995 23478999999999887653
No 28
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.38 E-value=5e-12 Score=113.29 Aligned_cols=124 Identities=14% Similarity=0.179 Sum_probs=73.0
Q ss_pred EEEEEEe--CCeeeCceeecCCCCCHHHHHHHHHHHHhccc-cccchhhhHHHHHHHHHHhccCceEEEecccccCCCC-
Q psy13138 174 EFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNA-SNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNT- 249 (362)
Q Consensus 174 evLlIkR--~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~-~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNT- 249 (362)
+||+++| .|.|.||||+||+||++.+||+||+.||||+. +.... ..++ ....+......++..
T Consensus 59 ~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~----------~~~~---~~~~~~~~~~~~~~~~ 125 (197)
T 3fcm_A 59 KFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLL----------DKAF---ALDVLTVNGHIKRGKY 125 (197)
T ss_dssp EEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESC----------SSCS---EEEEEEECCEEETTEE
T ss_pred EEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccC----------CCce---EEEEeeecCccccCcc
Confidence 6899988 89999999999999999999999999999997 33200 0011 111111110011110
Q ss_pred -CccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC---CCcCHHHHHHHHHHHhcCcccc
Q psy13138 250 -DNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT---FNPTHKTFMKVVTDIHGAHWYA 315 (362)
Q Consensus 250 -DnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp---L~asH~~iL~~a~~~~~a~~~~ 315 (362)
...+...++|.+....+.. +.+ ..++..+++|++++ +++ .+.+.+.+++++.+.+......
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~---~~~-~~~E~~~~~W~~~~-el~~~~~~~~~~~il~~~~~~l~~~~~~ 190 (197)
T 3fcm_A 126 VSSHLHLNLTYLIECSEDET---LML-KEDENSGVMWIPFN-EISKYCSEPHMIPIYEKLINKLKTQSKE 190 (197)
T ss_dssp ECCEEEEEEEEEEECCTTSC---CCC-CC----CEEEEEGG-GHHHHCCCGGGHHHHHHHHHHHHC----
T ss_pred cCCceeEEEEEEEEeCCCcc---cCC-CcccccceEEccHH-HHHhhcCCHHHHHHHHHHHHHHHhcccc
Confidence 0112233555555444321 122 24677889999999 443 6777888999999988776443
No 29
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.37 E-value=3.5e-12 Score=108.93 Aligned_cols=108 Identities=17% Similarity=0.231 Sum_probs=74.1
Q ss_pred EEEEEEe--C-----CeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccC
Q psy13138 174 EFVTVKF--N-----GEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDE 246 (362)
Q Consensus 174 evLlIkR--~-----g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDp 246 (362)
++|+++| . |.|.||||.+++||++.+||+||+.||||+.+... .+ ..++. +
T Consensus 21 ~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~------------~~-----~~~~~-~---- 78 (153)
T 3grn_A 21 EFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPG------------DI-----AGQVN-F---- 78 (153)
T ss_dssp CEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCC------------SE-----EEEEE-E----
T ss_pred cEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecc------------eE-----EEEEE-E----
Confidence 5889988 2 89999999999999999999999999999987531 11 11221 1
Q ss_pred CCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCC-CCcCHHHHHHHHHHHhc
Q psy13138 247 RNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMT-FNPTHKTFMKVVTDIHG 310 (362)
Q Consensus 247 RNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lp-L~asH~~iL~~a~~~~~ 310 (362)
..++ ......+|.+....+ .+...++..+++|+++++ +++ +....+.+|+...+...
T Consensus 79 ~~~~-~~~~~~~~~~~~~~~------~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~l~~~~~ 138 (153)
T 3grn_A 79 ELTE-KKVIAIVFDGGYVVA------DVKLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRENK 138 (153)
T ss_dssp ECSS-CEEEEEEEEEEECCC------CCCCCTTEEEEEEECHHHHTTCSSSCHHHHHHHHHHHHHHT
T ss_pred ecCC-ceEEEEEEEEEecCC------cEecCCCcceEEEEEHHHhhhcccchHHHHHHHHHHhcccc
Confidence 1112 233445555555444 233356778899999995 455 67788888888766543
No 30
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.37 E-value=1.2e-12 Score=110.38 Aligned_cols=109 Identities=21% Similarity=0.263 Sum_probs=69.9
Q ss_pred EEEEEEe-CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEeccc-ccCCCCCc
Q psy13138 174 EFVTVKF-NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYM-KDERNTDN 251 (362)
Q Consensus 174 evLlIkR-~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyv-dDpRNTDn 251 (362)
++|+++| .|.|.||||.+++||++.+||+||+.||||+.+... .+ ...+..+. .++..+ .
T Consensus 32 ~vLl~~r~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~------------~~-----~~~~~~~~~~~~~~~-~ 93 (148)
T 2azw_A 32 TMVLVQAPNGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIG------------CY-----LGEADEYFYSNHRQT-A 93 (148)
T ss_dssp EEEEEECTTSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEE------------EE-----EEEEEEEEEETTTTE-E
T ss_pred eEEEEEcCCCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEee------------eE-----EEEEEEEEcCCCCCc-c
Confidence 6889999 899999999999999999999999999999986531 01 11111111 111111 1
Q ss_pred cEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC---CCcCHHHHHHHHHH
Q psy13138 252 AWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT---FNPTHKTFMKVVTD 307 (362)
Q Consensus 252 AWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp---L~asH~~iL~~a~~ 307 (362)
......+|.+....+ .....++..+++|++++ +++ +...++.+|+++.+
T Consensus 94 ~~~~~~~~~~~~~~~------~~~~~~e~~~~~W~~~~-el~~~~~~~~~~~~l~~~~~ 145 (148)
T 2azw_A 94 YYNPGYFYVANTWRQ------LSEPLERTNTLHWVAPE-EAVRLLKRGSHRWAVEKWLA 145 (148)
T ss_dssp EEEEEEEEEEEEEEE------CSSCC-CCSEEEEECHH-HHHHHBSCHHHHHHHHHHHH
T ss_pred eEEEEEEEEEEcCcC------CcCCCCceeeEEEeeHH-HHHhhhcchhHHHHHHHHHH
Confidence 112233444443322 12233556789999999 443 67788999988763
No 31
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.36 E-value=1.5e-12 Score=127.85 Aligned_cols=150 Identities=19% Similarity=0.228 Sum_probs=87.9
Q ss_pred ccceEEEEEeeecC----CCCeEeccC--CCCCeeEEEEEEe--CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccc
Q psy13138 145 HSAFLIVTRWFRDH----NGDKVTMPS--SGKPLLEFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMT 216 (362)
Q Consensus 145 hAad~VVtRw~~~~----~G~iv~~~~--~~k~vLevLlIkR--~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s 216 (362)
-|+.+||+||+..+ .|.+..... -....++||+++| .|.|.||||+||+||++.+||+||+.||||+.+...
T Consensus 4 ~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~ 83 (364)
T 3fjy_A 4 EAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLG 83 (364)
T ss_dssp CEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEE
T ss_pred cccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeec
Confidence 47899999987431 121111100 0011368999999 699999999999999999999999999999987531
Q ss_pred hhhhHHHHHHHHHHhccCceEEEecccccCC-------CCCccEEEEEEEEEEecCCCc-------ccccCCCCCCcccc
Q psy13138 217 AKESKSILKHLETVMDDNCHFVYRGYMKDER-------NTDNAWVEGAVTTVHDKKGEH-------FMALPLSPGDGAED 282 (362)
Q Consensus 217 ~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpR-------NTDnAWietva~~~h~~~g~~-------~~~~~l~a~dda~~ 282 (362)
.++ +...| ...++. +.........+|.+....+.. +........+|..+
T Consensus 84 ------------~~l---~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~ 146 (364)
T 3fjy_A 84 ------------PYL---CEVEY--PLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEIND 146 (364)
T ss_dssp ------------EEE---EEEC-----------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCE
T ss_pred ------------ccc---ceEEE--eccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceee
Confidence 011 11111 001100 000112334445555443321 11111112457789
Q ss_pred eEEEecCCC--CCCCcCHHHHHHHHHHHhcC
Q psy13138 283 VKWLIVHSD--MTFNPTHKTFMKVVTDIHGA 311 (362)
Q Consensus 283 v~W~~vd~~--lpL~asH~~iL~~a~~~~~a 311 (362)
++|+++++. +..+...+.+|+.+.+.+..
T Consensus 147 ~~W~~~~e~~~~~~~~~~r~il~~~~~~l~~ 177 (364)
T 3fjy_A 147 IVWVSVREARKILSHSTDKDTLAVFVDRVQE 177 (364)
T ss_dssp EEEEEHHHHHHHCSCHHHHHHHHHHHHHHHT
T ss_pred eecCcHHHHHHHhcchhhHHHHHHHHHHhcc
Confidence 999999952 22678889999999988754
No 32
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.34 E-value=6.2e-12 Score=105.83 Aligned_cols=106 Identities=13% Similarity=0.197 Sum_probs=72.5
Q ss_pred EEEEEEe--C------CeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEeccccc
Q psy13138 174 EFVTVKF--N------GEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKD 245 (362)
Q Consensus 174 evLlIkR--~------g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdD 245 (362)
++|+++| . |.|.||||.+++||++.+||.||+.||||+.+... .+ ..++. +
T Consensus 18 ~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~------------~~-----~~~~~-~--- 76 (140)
T 3gwy_A 18 KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVG------------EK-----LLTVH-H--- 76 (140)
T ss_dssp EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEE------------EE-----EEEEE-C---
T ss_pred EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEec------------eE-----EEEEE-E---
Confidence 5888888 2 57999999999999999999999999999986531 01 11111 1
Q ss_pred CCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHHh
Q psy13138 246 ERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDIH 309 (362)
Q Consensus 246 pRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~~ 309 (362)
..++.. ....+|.+....+ .+. .++..+++|+++++ ++++.+.++.+|+++.+.-
T Consensus 77 -~~~~~~-~~~~~f~~~~~~~------~~~-~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~~ 133 (140)
T 3gwy_A 77 -TYPDFE-ITMHAFLCHPVGQ------RYV-LKEHIAAQWLSTREMAILDWAEADKPIVRKISEQE 133 (140)
T ss_dssp -CCSSCC-EEEEEEEEEECCS------CCC-CCSSCEEEEECHHHHTTSCBCGGGHHHHHHHHC--
T ss_pred -EeCCce-EEEEEEEEEecCC------ccc-ccccceeEeccHHHHhhCCCCcccHHHHHHHHhCc
Confidence 112222 3445666665544 222 24567899999995 4558899999999877643
No 33
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.34 E-value=8.9e-12 Score=106.55 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=69.9
Q ss_pred EEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCC
Q psy13138 174 EFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERN 248 (362)
Q Consensus 174 evLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRN 248 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+... . -..++. ..
T Consensus 33 ~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~------------~-----~~~~~~---~~--- 89 (156)
T 3gg6_A 33 EVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPE------------T-----LLSVEE---RG--- 89 (156)
T ss_dssp EEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE------------E-----EEEEEE---SS---
T ss_pred EEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEee------------e-----EEEEEc---CC---
Confidence 6899998 489999999999999999999999999999986531 0 112221 11
Q ss_pred CCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC-CCc--CHHHHHHHHHHHhcC
Q psy13138 249 TDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT-FNP--THKTFMKVVTDIHGA 311 (362)
Q Consensus 249 TDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp-L~a--sH~~iL~~a~~~~~a 311 (362)
..|+ .++|.+....+... ......++..+++|++++ +++ +.. .-..+|+.++..+..
T Consensus 90 --~~~~-~~~f~~~~~~~~~~--~~~~~~~E~~~~~W~~~~-el~~~~~~~~~~~~l~~~~~~~~~ 149 (156)
T 3gg6_A 90 --PSWV-RFVFLARPTGGILK--TSKEADAESLQAAWYPRT-SLPTPLRAHDILHLVELAAQYRQQ 149 (156)
T ss_dssp --TTEE-EEEEEEEEEEECCC--CGGGCSSSCSEEEEEETT-SCCSSBSCTHHHHHHHHHHHHHHH
T ss_pred --CCEE-EEEEEEEeeCCeec--cCCCCCcceeeeEEEcHH-HCcccccchhHHHHHHHHHHHhhc
Confidence 1233 34555554333210 011134567789999999 666 322 335577777665543
No 34
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.34 E-value=2.3e-12 Score=111.58 Aligned_cols=106 Identities=16% Similarity=0.204 Sum_probs=70.8
Q ss_pred EEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCC
Q psy13138 174 EFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERN 248 (362)
Q Consensus 174 evLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRN 248 (362)
+||+++| .|.|+||||.+++||++.+||+||+.||||+.+... ++ ..++.... +.
T Consensus 24 ~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~------------~~-----~~~~~~~~---~~ 83 (161)
T 3exq_A 24 RVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGV------------TF-----CGTCEWFD---DD 83 (161)
T ss_dssp CEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCC------------EE-----EEEEEEEC---SS
T ss_pred EEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCC------------cE-----EEEEeccc---CC
Confidence 5788888 466789999999999999999999999999986531 11 12221111 11
Q ss_pred CCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHH
Q psy13138 249 TDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTD 307 (362)
Q Consensus 249 TDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~ 307 (362)
........+|.+....+ .+. .++..+++|+++++ ++++.++++.+|+.+.+
T Consensus 84 -~~~~~~~~~~~~~~~~~------~~~-~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 136 (161)
T 3exq_A 84 -RQHRKLGLLYRASNFTG------TLK-ASAEGQLSWLPITALTRENSAASLPEFLQVFTG 136 (161)
T ss_dssp -CSSEEEEEEEEECCEES------CCC-GGGTTTEEEECGGGCCTTTBCTTHHHHHHHHTT
T ss_pred -CCeEEEEEEEEEeccCC------ccC-CCccceEEEeeHHHhhhCccChHHHHHHHHHhh
Confidence 12334445555544333 222 24556799999995 23478899999988766
No 35
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.33 E-value=5.3e-12 Score=106.03 Aligned_cols=109 Identities=14% Similarity=0.198 Sum_probs=73.7
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCC
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDER 247 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpR 247 (362)
++|+++| .|.|.||||.+++||++.+||.||+.||||+.+... .+. ....+ .+ .
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~------------~~~---~~~~~-~~----~ 80 (144)
T 3r03_A 21 RVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRAS------------CLA---PLAFA-SH----S 80 (144)
T ss_dssp CEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGG------------GCE---EEEEE-EE----E
T ss_pred EEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeecc------------ceE---EEEee-ec----c
Confidence 4889998 388999999999999999999999999999987531 111 11111 01 1
Q ss_pred CCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHHhc
Q psy13138 248 NTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDIHG 310 (362)
Q Consensus 248 NTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~~~ 310 (362)
.+. ......+|.+....+ .+. .++..+++|+++++ ++++.+.++.+|++..+..+
T Consensus 81 ~~~-~~~~~~~~~~~~~~~------~~~-~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 137 (144)
T 3r03_A 81 YDT-FHLLMPLYACRSWRG------RAT-AREGQTLAWVRAERLREYPMPPADLPLIPILQDWLE 137 (144)
T ss_dssp CSS-SEEEEEEEEECCCBS------CCC-CCSSCEEEEECGGGGGGSCCCTTTTTHHHHHHHHC-
T ss_pred CCC-eEEEEEEEEEEecCC------ccC-CCCcceEEEEeHHHhccCCCCcchHHHHHHHhCccc
Confidence 112 223345555554333 222 34567899999995 45688999999999887664
No 36
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.32 E-value=6.4e-12 Score=110.89 Aligned_cols=106 Identities=15% Similarity=0.243 Sum_probs=71.5
Q ss_pred EEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCC
Q psy13138 174 EFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERN 248 (362)
Q Consensus 174 evLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRN 248 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+... .++ +...+ .+ .
T Consensus 37 ~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~------------~~l---~~~~~-~~----~- 95 (176)
T 3q93_A 37 RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDAL------------HKV---GQIVF-EF----V- 95 (176)
T ss_dssp EEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCC------------EEE---EEEEE-EE----T-
T ss_pred EEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceee------------EEE---EEEEE-Ec----C-
Confidence 6888887 589999999999999999999999999999987531 011 11111 11 1
Q ss_pred CCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC---CCcCHHHHHHHHHHH
Q psy13138 249 TDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT---FNPTHKTFMKVVTDI 308 (362)
Q Consensus 249 TDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp---L~asH~~iL~~a~~~ 308 (362)
.+..++...+|.+....+ .+.. .+..+++|++++ +++ +.++++.+|+.+++.
T Consensus 96 ~~~~~~~~~~f~~~~~~~------~~~~-~e~~~~~W~~~~-el~~~~~~~~~~~~l~~~~~~ 150 (176)
T 3q93_A 96 GEPELMDVHVFCTDSIQG------TPVE-SDEMRPCWFQLD-QIPFKDMWPDDSYWFPLLLQK 150 (176)
T ss_dssp TCSCEEEEEEEEESCEES------CCCC-CSSEEEEEEETT-CCCGGGBCTTHHHHHHHHHTT
T ss_pred CCCcEEEEEEEEEECCCC------CcCC-CcceeeEEeeHH-HccccccCcchHHHHHHHHcC
Confidence 122344455555543333 2232 344567999999 544 888999999888764
No 37
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.31 E-value=8.4e-12 Score=107.12 Aligned_cols=107 Identities=17% Similarity=0.241 Sum_probs=72.1
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCC
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDER 247 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpR 247 (362)
++|+++| .|.|.||||.+++||++.+||+||+.||||+.+... .+. ....+. + .
T Consensus 42 ~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~------------~~~---~~~~~~-~----~ 101 (158)
T 3hhj_A 42 RVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQAD------------NLF---PLTFAS-H----G 101 (158)
T ss_dssp EEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGG------------GCE---EEEEEE-E----E
T ss_pred EEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecc------------eEE---EEEEEe-e----c
Confidence 6899998 378999999999999999999999999999987531 111 111111 1 1
Q ss_pred CCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHH
Q psy13138 248 NTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDI 308 (362)
Q Consensus 248 NTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~ 308 (362)
.++. .....+|.+....+ .+. .++..+++|+++++ ++++...++.+|+.+.+.
T Consensus 102 ~~~~-~~~~~~~~~~~~~~------~~~-~~e~~~~~W~~~~el~~~~~~~~~~~il~~~~~~ 156 (158)
T 3hhj_A 102 YETF-HLLMPLYFCSHYKG------VAQ-GREGQNLKWIFINDLDKYPMPEADKPLVQVLKNF 156 (158)
T ss_dssp CSSC-EEEEEEEEESCCBS------CCC-CTTSCEEEEEEGGGGGGSCCCTTTHHHHHHHHHC
T ss_pred cCCc-EEEEEEEEEEECCC------ccC-CccccceEEEcHHHHhhCCCCcchHHHHHHHHHh
Confidence 1122 23344454443333 222 34567899999995 345889999999987653
No 38
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.30 E-value=6.5e-12 Score=107.34 Aligned_cols=41 Identities=27% Similarity=0.299 Sum_probs=37.4
Q ss_pred EEEEEEe-----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF-----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR-----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+.
T Consensus 31 ~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~ 76 (160)
T 1rya_A 31 EFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLP 76 (160)
T ss_dssp CEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCC
T ss_pred EEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCC
Confidence 5788888 4799999999999999999999999999999853
No 39
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.29 E-value=1.1e-11 Score=107.75 Aligned_cols=110 Identities=18% Similarity=0.223 Sum_probs=68.7
Q ss_pred EEEEEEe---CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCC
Q psy13138 174 EFVTVKF---NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTD 250 (362)
Q Consensus 174 evLlIkR---~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTD 250 (362)
++|+++| .|.|.||||.+++||++.+||+||+.||||+.+... . -..++.. + .++
T Consensus 35 ~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~------------~-----~~~~~~~----~-~~~ 92 (171)
T 3id9_A 35 KVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIK------------K-----LLYVCDK----P-DAS 92 (171)
T ss_dssp EEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEE------------E-----EEEEEEE----T-TSS
T ss_pred EEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccc------------e-----EEEEEcc----c-CCC
Confidence 6889998 689999999999999999999999999999986531 0 1222211 1 112
Q ss_pred ccEEEEEEEEEEecCCCcc-cccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHH
Q psy13138 251 NAWVEGAVTTVHDKKGEHF-MALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTD 307 (362)
Q Consensus 251 nAWietva~~~h~~~g~~~-~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~ 307 (362)
..+ ..++|.+....+... ....+ ..++..+++|+++++ ++++...++.+|+.+..
T Consensus 93 ~~~-~~~~~~~~~~~~~~~~~~~~~-~~~E~~~~~w~~~~el~~~~~~~~~~~~l~~~~~ 150 (171)
T 3id9_A 93 PSL-LHITFLLERIEGEITLPSNEF-DHNPIHDVQMVPINELSYYGFSETFINLISGGLA 150 (171)
T ss_dssp SCE-EEEEEEEEEC--------------CCCCCEEEEETGGGGGGTCCTTCSHHHHHGGG
T ss_pred CcE-EEEEEEEEEcCCcccCCccCC-CcCeeeeEEEEeHHHHhhCCCCHHHHHHHHHhhc
Confidence 222 234455554444211 00011 235677899999995 23478888888877643
No 40
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.29 E-value=3.1e-12 Score=109.20 Aligned_cols=42 Identities=24% Similarity=0.222 Sum_probs=38.6
Q ss_pred EEEEEEeCCeeeCceeecCCCCCHHHHHHHHHHHHhcccccc
Q psy13138 174 EFVTVKFNGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNM 215 (362)
Q Consensus 174 evLlIkR~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~ 215 (362)
++|+++|.|.|.||||++++||++.+||+||+.||||+.+..
T Consensus 31 ~vLl~~r~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~ 72 (154)
T 2pqv_A 31 KLLVTKDKGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQA 72 (154)
T ss_dssp EEEEEEETTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEE
T ss_pred EEEEEecCCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeee
Confidence 578888889999999999999999999999999999998653
No 41
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.29 E-value=1.3e-11 Score=110.90 Aligned_cols=41 Identities=29% Similarity=0.456 Sum_probs=38.2
Q ss_pred EEEEEEe----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
+||+++| .|.|+||||+|++||++.+||+||+.||||+.+.
T Consensus 40 ~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~ 84 (199)
T 3h95_A 40 KILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSE 84 (199)
T ss_dssp EEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEE
T ss_pred EEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccc
Confidence 6889998 5899999999999999999999999999999865
No 42
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.28 E-value=4.8e-11 Score=113.37 Aligned_cols=107 Identities=14% Similarity=0.181 Sum_probs=72.0
Q ss_pred EEEEEEe----CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCC
Q psy13138 174 EFVTVKF----NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNT 249 (362)
Q Consensus 174 evLlIkR----~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNT 249 (362)
++|+++| .|.|+||||+||+||++++|++||+.||||+.+... .++ +...+ ..+
T Consensus 152 ~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~------------~~~---~~~~~----~~~--- 209 (269)
T 1vk6_A 152 SILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNL------------RYV---TSQPW----PFP--- 209 (269)
T ss_dssp EEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEE------------EEE---EEEEE----ETT---
T ss_pred EEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeE------------EEE---EEEec----CCC---
Confidence 6889998 589999999999999999999999999999986531 011 11111 111
Q ss_pred CccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC-CCcCH---HHHHHHHHHHhcC
Q psy13138 250 DNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT-FNPTH---KTFMKVVTDIHGA 311 (362)
Q Consensus 250 DnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp-L~asH---~~iL~~a~~~~~a 311 (362)
....++|.+...+++ +.+ ..+|..+++|++++ +++ +..++ +.+|+.+++.++.
T Consensus 210 ---~~~~~~f~a~~~~~~----~~~-~~~E~~~~~W~~~~-el~~l~~~~si~~~li~~~l~~~r~ 266 (269)
T 1vk6_A 210 ---QSLMTAFMAEYDSGD----IVI-DPKELLEANWYRYD-DLPLLPPPGTVARRLIEDTVAMCRA 266 (269)
T ss_dssp ---EEEEEEEEEEEEECC----CCC-CTTTEEEEEEEETT-SCCSCCCTTSHHHHHHHHHHHHHHH
T ss_pred ---CEEEEEEEEEECCCC----cCC-CCcceEEEEEEEHH-HhhhcccCcHHHHHHHHHHHHHHHh
Confidence 123445555544332 222 24577899999999 555 55554 7788888776653
No 43
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.27 E-value=7.9e-12 Score=104.28 Aligned_cols=107 Identities=14% Similarity=0.224 Sum_probs=70.8
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCC
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDER 247 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpR 247 (362)
++|+++| .|.|.||||.+++||++.+||+||+.||||+.+... ..+.. ....+
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~------------~~~~~-~~~~~-------- 79 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVG------------EYVAS-HQREV-------- 79 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECC------------EEEEE-EEEEE--------
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecc------------cEEEE-EEEec--------
Confidence 5788888 389999999999999999999999999999976531 01100 01111
Q ss_pred CCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHHhc
Q psy13138 248 NTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDIHG 310 (362)
Q Consensus 248 NTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~~~ 310 (362)
++.. ....+|.+....+ .+. .++..+++|+++++ ++++...++.+|+.+.+...
T Consensus 80 -~~~~-~~~~~~~~~~~~~------~~~-~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~r~ 135 (140)
T 2rrk_A 80 -SGRI-IHLHAWHVPDFHG------TLQ-AHEHQALVWCSPEEALQYPLAPADIPLLEAFMALRA 135 (140)
T ss_dssp -TTEE-EEEEEEEESEEEE------CCC-CSSCSCEEEECHHHHTTSCCCTTHHHHHHHHHHHHH
T ss_pred -CCcE-EEEEEEEEEeeCC------CcC-CCccceeEEeCHHHHhhCCCChhHHHHHHHHHHHhh
Confidence 1111 2233444333222 122 23456799999985 34588899999999887643
No 44
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.26 E-value=2.7e-11 Score=102.68 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=37.2
Q ss_pred EEEEEEe--C---CeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF--N---GEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR--~---g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|+++| . |.|.||||++++||++.+||+||+.||||+.+.
T Consensus 20 ~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~ 65 (153)
T 2b0v_A 20 KYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFL 65 (153)
T ss_dssp EEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEE
T ss_pred EEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEec
Confidence 5888988 3 379999999999999999999999999999865
No 45
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.25 E-value=1.7e-10 Score=100.62 Aligned_cols=121 Identities=10% Similarity=0.122 Sum_probs=73.4
Q ss_pred EEEEEEe--CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCC---
Q psy13138 174 EFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERN--- 248 (362)
Q Consensus 174 evLlIkR--~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRN--- 248 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+... ..+........|. .|..
T Consensus 21 ~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~-----------~~~~~~~~~~~~~----~~~~~~~ 85 (164)
T 2kdv_A 21 QVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDV-----------RILASTRNWLRYK----LPKRLVR 85 (164)
T ss_dssp EEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGE-----------EEEEECSSCEEEE----CCTTTCC
T ss_pred EEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccce-----------EEEEEecceeEEe----cCcceee
Confidence 5788988 789999999999999999999999999999976521 0011100011121 1110
Q ss_pred ---CCc-cEEEEEEEEEEecCCCcccccCCC--CCCcccceEEEecCCCCC-CCcCHHHHHHHHHHHhcC
Q psy13138 249 ---TDN-AWVEGAVTTVHDKKGEHFMALPLS--PGDGAEDVKWLIVHSDMT-FNPTHKTFMKVVTDIHGA 311 (362)
Q Consensus 249 ---TDn-AWietva~~~h~~~g~~~~~~~l~--a~dda~~v~W~~vd~~lp-L~asH~~iL~~a~~~~~a 311 (362)
... .-....+|.+....+. ..+.+. +.++..+++|+++++.+. +.+-.+.+++.++..+..
T Consensus 86 ~~~~~~~~~~~~~~f~~~~~~~~--~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l~~ 153 (164)
T 2kdv_A 86 WDTKPVCIGQKQKWFLLQLVSGD--AEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFAS 153 (164)
T ss_dssp TTSSSCCCEEEEEEEEEEESSCG--GGCCSCSSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHHH
T ss_pred eccCcccccceeEEEEEEecCCc--cccccCCCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHHHH
Confidence 000 1123455555544432 122333 345778999999995444 333356777777776644
No 46
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.25 E-value=2.7e-11 Score=103.86 Aligned_cols=41 Identities=27% Similarity=0.236 Sum_probs=36.3
Q ss_pred EEEEEEe-CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF-NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR-~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|+++| .|.|.||||+|++||++.+||+||+.||||+.+.
T Consensus 34 ~vLL~~r~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 75 (153)
T 3eds_A 34 EILFQYPGGEYWSLPAGAIELGETPEEAVVREVWEETGLKVQ 75 (153)
T ss_dssp CEEEECC---CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEE
T ss_pred eEEEEEcCCCcEECCccccCCCCCHHHHHHHHHHHHHCccce
Confidence 4788888 8999999999999999999999999999999865
No 47
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.25 E-value=2.3e-11 Score=106.50 Aligned_cols=137 Identities=21% Similarity=0.290 Sum_probs=82.0
Q ss_pred cccccccccCccCCCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe-------CCeeeC-ceeecCCCCCHHHHH
Q psy13138 130 TGICGRGLLGRWGPNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF-------NGEWGI-PGGFIEGKETYMDRG 201 (362)
Q Consensus 130 TGl~GRG~L~rwGPNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR-------~g~WaL-PGG~Vd~GEsl~~aa 201 (362)
+|...|+...+-|.-|.+-.+|.. +.+ + ++|+++| .|.|.| |||++++||++.+||
T Consensus 22 ~g~~~r~~~~~~~~~~~~~~v~i~---~~~---------~----~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa 85 (180)
T 2fkb_A 22 IAQASREQMRAQCLRHRATYIVVH---DGM---------G----KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESA 85 (180)
T ss_dssp EEEEEHHHHHHHTCCEEEEEEEEE---CSS---------S----CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHH
T ss_pred eeEEEHHHhhccCceeeEEEEEEE---CCC---------C----EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHH
Confidence 455556655555666655444443 111 2 3677787 367999 999999999999999
Q ss_pred HHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcccccCCCCCCccc
Q psy13138 202 RKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAE 281 (362)
Q Consensus 202 ~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~ 281 (362)
+||+.||||+..... ..+ +...+ .. +. ......+|.+. ..+. +.+ ..++..
T Consensus 86 ~REl~EEtGl~~~~~-----------~~l----~~~~~----~~---~~-~~~~~~~f~~~-~~~~----~~~-~~~E~~ 136 (180)
T 2fkb_A 86 RREAEEELGIAGVPF-----------AEH----GQFYF----ED---KN-CRVWGALFSCV-SHGP----FAL-QEDEVS 136 (180)
T ss_dssp HHHHHHHHCCBSCCC-----------EEE----EEEEE----EE---TT-EEEEEEEEEEE-CCCC----CCC-CTTTEE
T ss_pred HHHHHHHHCCCccce-----------EEE----EEEEe----cC---CC-ceEEEEEEEEe-cCCC----cCC-ChhHhh
Confidence 999999999975421 001 11111 11 11 22334445444 2221 122 245678
Q ss_pred ceEEEecCC--CC--CCCcCHHHHHHHHHHHhcC
Q psy13138 282 DVKWLIVHS--DM--TFNPTHKTFMKVVTDIHGA 311 (362)
Q Consensus 282 ~v~W~~vd~--~l--pL~asH~~iL~~a~~~~~a 311 (362)
+++|+++++ ++ ++.+.+..+|+.+...+..
T Consensus 137 ~~~W~~~~el~~~~~~~~~~~~~~l~~~~~~~~~ 170 (180)
T 2fkb_A 137 EVCWLTPEEITARCDEFTPDSLKALALWMKRNAK 170 (180)
T ss_dssp EEEEECHHHHHTTGGGBCHHHHHHHHHHHHHC--
T ss_pred eEEEecHHHHHHHHHHhCCcHHHHHHHHHHhhcC
Confidence 899999995 22 3467788888877766543
No 48
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.23 E-value=1.6e-11 Score=100.79 Aligned_cols=102 Identities=19% Similarity=0.220 Sum_probs=67.8
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCC
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDER 247 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpR 247 (362)
++|+++| .|.|.||||++++||++.+||.||+.||||+.+... ..+ +...+ .
T Consensus 17 ~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~------------~~~---~~~~~-------~ 74 (129)
T 1mut_A 17 EIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHF------------SLF---EKLEY-------E 74 (129)
T ss_dssp EEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEE------------CCC---CCCBC-------C
T ss_pred EEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccc------------eEE---EEEEE-------e
Confidence 6888988 389999999999999999999999999999976531 011 11000 1
Q ss_pred CCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHH
Q psy13138 248 NTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVV 305 (362)
Q Consensus 248 NTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a 305 (362)
.++.. +...+|.+....+ .+. .++..+++|+++++ ++++...++.+|+..
T Consensus 75 ~~~~~-~~~~~~~~~~~~~------~~~-~~e~~~~~W~~~~el~~~~~~~~~~~~l~~l 126 (129)
T 1mut_A 75 FPDRH-ITLWFWLVERWEG------EPW-GKEGQPGEWMSLVGLNADDFPPANEPVIAKL 126 (129)
T ss_dssp CSSCE-EECCCEEEEECSS------CCC-CCSSCCCEEEESSSCCTTTSCTTCHHHHHHH
T ss_pred cCCce-EEEEEEEEEccCC------ccC-CcccceeEEeCHHHcccccCCchhHHHHHHH
Confidence 12222 2334455554433 122 34566799999995 234777888888765
No 49
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.22 E-value=2.1e-11 Score=104.24 Aligned_cols=122 Identities=14% Similarity=0.147 Sum_probs=71.8
Q ss_pred EEEEEEe---CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEeccccc-----
Q psy13138 174 EFVTVKF---NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKD----- 245 (362)
Q Consensus 174 evLlIkR---~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdD----- 245 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+... ...+. ....| .|.+.
T Consensus 27 ~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-----------~~~~~--~~~~~-~~~~~~~~~~ 92 (165)
T 1f3y_A 27 KIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEV-----------IAEVP--YWLTY-DFPPKVREKL 92 (165)
T ss_dssp CEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEE-----------EEECS--SCCBC-CCCHHHHHHH
T ss_pred cEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhh-----------hcccc--cceee-ecCccccccc
Confidence 4788998 589999999999999999999999999999975310 00000 00000 00000
Q ss_pred --CCCCCccEEEEEEEEEEecCCCcccccCCC----CCCcccceEEEecCCCCC--CCcCHHHHHHHHHHHhcCc
Q psy13138 246 --ERNTDNAWVEGAVTTVHDKKGEHFMALPLS----PGDGAEDVKWLIVHSDMT--FNPTHKTFMKVVTDIHGAH 312 (362)
Q Consensus 246 --pRNTDnAWietva~~~h~~~g~~~~~~~l~----a~dda~~v~W~~vd~~lp--L~asH~~iL~~a~~~~~a~ 312 (362)
....+..-....+|.+....+. ..+.+. ..++..+++|++++ ++. +...+..+++++++.+..+
T Consensus 93 ~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~~~~~~~~E~~~~~W~~~~-el~~~~~~~~~~~~~~~~~~l~~~ 164 (165)
T 1f3y_A 93 NIQWGSDWKGQAQKWFLFKFTGQD--QEINLLGDGSEKPEFGEWSWVTPE-QLIDLTVEFKKPVYKEVLSVFAPH 164 (165)
T ss_dssp GGGSCSSCCSCBEEEEEEEECSCG--GGCCCCCCSSSCCSEEEEEEECHH-HHHHHBCGGGHHHHHHHHHHHGGG
T ss_pred cccccccccCceEEEEEEEecCCc--ccccccCCCCCCChhheeEEecHH-HHHHHhhhhhHHHHHHHHHHhhhc
Confidence 0000000001234455543321 112222 24577899999999 554 3444888999998877653
No 50
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.19 E-value=1.8e-11 Score=108.70 Aligned_cols=74 Identities=14% Similarity=0.051 Sum_probs=42.1
Q ss_pred CCCCCCCCCCCcccc-cccccCccCCCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe-------CCeeeC-cee
Q psy13138 119 NTGRPLNPSGRTGIC-GRGLLGRWGPNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF-------NGEWGI-PGG 189 (362)
Q Consensus 119 ~~G~P~NP~GRTGl~-GRG~L~rwGPNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR-------~g~WaL-PGG 189 (362)
.+|.|...+-|.... +.|.+-+ ++.++|.. .+ + ++|+++| .|.|.| |||
T Consensus 11 ~~~~~~g~~~r~~~~~~~~~~~~-----~v~~~i~~----~~---------g----~vLl~~R~~~~~~~~g~w~~~PgG 68 (190)
T 1hzt_A 11 AQGVPTGTLEKYAAHTADTRLHL-----AFSSWLFN----AK---------G----QLLVTRRALSKKAWPGVWTNSVCG 68 (190)
T ss_dssp --------------------CEE-----CEEEEEEC----TT---------C----CEEEEEECTTCSSSTTCEEESEEE
T ss_pred CCCCEeeeEEHhhhcccCCceEE-----EEEEEEEc----CC---------C----EEEEEEeCCCCCCCCCcccCcccc
Confidence 466666666665554 4443321 44445543 11 2 4778888 389999 999
Q ss_pred ecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 190 FIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 190 ~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
+|++||++.+||+||+.||||+.+.
T Consensus 69 ~ve~gEt~~~aa~REl~EEtGl~~~ 93 (190)
T 1hzt_A 69 HPQLGESNEDAVIRRCRYELGVEIT 93 (190)
T ss_dssp CCCTTCCHHHHHHHHHHHHHCCCBS
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCch
Confidence 9999999999999999999999765
No 51
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.17 E-value=9.2e-12 Score=112.20 Aligned_cols=113 Identities=18% Similarity=0.178 Sum_probs=65.5
Q ss_pred EEEEEEe---CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCCCCC
Q psy13138 174 EFVTVKF---NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDERNTD 250 (362)
Q Consensus 174 evLlIkR---~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpRNTD 250 (362)
+||+++| .|.|.||||++|+||++.+||+||+.||||+.+... . -..++..+ .+ +
T Consensus 55 ~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~------------~-----~l~~~~~~---~~--~ 112 (194)
T 2fvv_A 55 EVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLG------------R-----LVGIFENQ---ER--K 112 (194)
T ss_dssp EEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEE------------E-----EEEEEEET---TT--T
T ss_pred EEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccc------------e-----EEEEEEcC---CC--c
Confidence 6899997 589999999999999999999999999999976531 0 12222211 11 1
Q ss_pred ccEEEEEEEEEEecCCCcccccCCCCC-CcccceEEEecCCCCC-CCcCHHHHHHHHHHHhcCccccc
Q psy13138 251 NAWVEGAVTTVHDKKGEHFMALPLSPG-DGAEDVKWLIVHSDMT-FNPTHKTFMKVVTDIHGAHWYAY 316 (362)
Q Consensus 251 nAWietva~~~h~~~g~~~~~~~l~a~-dda~~v~W~~vd~~lp-L~asH~~iL~~a~~~~~a~~~~~ 316 (362)
. ...+|.+..... .. ..... .+..+++|++++ +++ +..+|..++..++..+.+.....
T Consensus 113 -~--~~~~f~~~~~~~--~~--~~~~~~e~~~~~~W~~~~-el~~~l~~~~~~~~~~l~~l~~~~~~~ 172 (194)
T 2fvv_A 113 -H--RTYVYVLIVTEV--LE--DWEDSVNIGRKREWFKIE-DAIKVLQYHKPVQASYFETLRQGYSAN 172 (194)
T ss_dssp -E--EEEEEEEEEEEE--CS--SCHHHHHHCCCEEEEEHH-HHHHHHTTTCHHHHHHTCC--------
T ss_pred -e--EEEEEEEEEccc--cC--CCCCcccccceEEEEEHH-HHHHHHhcCcHHHHHHHHHHhhccccc
Confidence 1 223333332110 00 11111 122478999999 554 55677788877766555543333
No 52
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.12 E-value=3.4e-10 Score=96.47 Aligned_cols=92 Identities=21% Similarity=0.231 Sum_probs=60.3
Q ss_pred EEEEEEe-C--------CeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccc
Q psy13138 174 EFVTVKF-N--------GEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMK 244 (362)
Q Consensus 174 evLlIkR-~--------g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvd 244 (362)
++|+++| . |.|.||||.+++||++.+||+||+.||||+.+... ++ ...+...
T Consensus 26 ~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~------------~~-----l~~~~~~-- 86 (159)
T 1sjy_A 26 DILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPV------------KF-----LGAYLGR-- 86 (159)
T ss_dssp CEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEE------------EE-----EEEEEEE--
T ss_pred CEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceee------------EE-----EEEEecc--
Confidence 4778887 3 78999999999999999999999999999986531 01 1111111
Q ss_pred cCCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC
Q psy13138 245 DERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS 290 (362)
Q Consensus 245 DpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~ 290 (362)
.++.......+|.+....+.. +.+...++..+++|+++++
T Consensus 87 ---~~~~~~~~~~~f~~~~~~~~~---~~~~~~~E~~~~~W~~~~e 126 (159)
T 1sjy_A 87 ---FPDGVLILRHVWLAEPEPGQT---LAPAFTDEIAEASFVSRED 126 (159)
T ss_dssp ---CTTSCEEEEEEEEEEECSSCC---CCCCCCSSEEEEEEECHHH
T ss_pred ---cCCCceEEEEEEEEEccCCCc---cccCCCCceeEEEEecHHH
Confidence 111133445566666544421 1221345678899999994
No 53
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.08 E-value=4e-11 Score=101.19 Aligned_cols=41 Identities=24% Similarity=0.293 Sum_probs=38.3
Q ss_pred EEEEEEe--CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF--NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR--~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+.
T Consensus 18 ~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~ 60 (146)
T 2jvb_A 18 KILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLT 60 (146)
T ss_dssp EEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCS
T ss_pred EEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCch
Confidence 6888988 7999999999999999999999999999999764
No 54
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.07 E-value=6.6e-10 Score=96.39 Aligned_cols=42 Identities=21% Similarity=0.195 Sum_probs=37.1
Q ss_pred EEEEEEe-------CCeee-CceeecCCCCCHHHHHHHHHHHHhcccccc
Q psy13138 174 EFVTVKF-------NGEWG-IPGGFIEGKETYMDRGRKEFLEEALNASNM 215 (362)
Q Consensus 174 evLlIkR-------~g~Wa-LPGG~Vd~GEsl~~aa~REl~EEtGl~~~~ 215 (362)
++|+++| .|.|. ||||+|++||++.+||+||+.||||+.+..
T Consensus 47 ~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~ 96 (171)
T 1q27_A 47 QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDA 96 (171)
T ss_dssp EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSS
T ss_pred eEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccc
Confidence 5778877 37898 999999999999999999999999998653
No 55
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.05 E-value=2e-10 Score=98.22 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=67.9
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHH-HHHHHHHHHHhc-cccccchhhhHHHHHHHHHHhccCceEEEeccccc
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYM-DRGRKEFLEEAL-NASNMTAKESKSILKHLETVMDDNCHFVYRGYMKD 245 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~-~aa~REl~EEtG-l~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdD 245 (362)
++|+++| .|.|.||||.+++||+++ +||+||+.|||| +.+... ..+.. ..++|
T Consensus 35 ~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~------------~~l~~-~~~~~------ 95 (155)
T 1x51_A 35 QILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHL------------RHLGE-VVHTF------ 95 (155)
T ss_dssp EEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTC------------EECCC-BCCBC------
T ss_pred EEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeee------------eecce-EEEec------
Confidence 5788888 378999999999999997 999999999999 654320 01100 01111
Q ss_pred CCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHH
Q psy13138 246 ERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTD 307 (362)
Q Consensus 246 pRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~ 307 (362)
++..|. ..+|.+....+. +. .++..+++|+++++ ++++...++.+|+.+.+
T Consensus 96 ---~~~~~~-~~~~~~~~~~~~------~~-~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 148 (155)
T 1x51_A 96 ---SHIKLT-YQVYGLALEGQT------PV-TTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQG 148 (155)
T ss_dssp ---SSCEEE-EEEEEEECSSCC------CC-CCCCTTEEEEEHHHHHHSCCCHHHHHHHHHHHH
T ss_pred ---CCccEE-EEEEEEEEcCCC------CC-CCCCCccEEccHHHhhhcCCCHHHHHHHHHHHh
Confidence 222233 344555544332 22 23456799999995 34577788999888765
No 56
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.05 E-value=5.4e-10 Score=94.92 Aligned_cols=41 Identities=27% Similarity=0.212 Sum_probs=35.1
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|++++ .+.|.||||++|+||++.+||+||+.||||+.+.
T Consensus 18 ~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~ 64 (145)
T 2w4e_A 18 EAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAAS 64 (145)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECS
T ss_pred EEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccC
Confidence 4666654 2389999999999999999999999999999764
No 57
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=98.99 E-value=1.9e-09 Score=102.19 Aligned_cols=41 Identities=32% Similarity=0.444 Sum_probs=38.3
Q ss_pred EEEEEEe---CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF---NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR---~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
+||+++| .|.|.||||+||+||++.+||+||+.||||+.+.
T Consensus 115 ~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~ 158 (271)
T 2a6t_A 115 QCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCS 158 (271)
T ss_dssp EEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCT
T ss_pred EEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCce
Confidence 6899998 6899999999999999999999999999999865
No 58
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=98.98 E-value=2.4e-09 Score=96.44 Aligned_cols=41 Identities=22% Similarity=0.355 Sum_probs=36.8
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|++++ .+.|.||||++|+||++.+||+||+.||||+...
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~ 107 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGAN 107 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEE
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcC
Confidence 6888876 3579999999999999999999999999999764
No 59
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=98.97 E-value=2e-10 Score=105.55 Aligned_cols=41 Identities=15% Similarity=0.231 Sum_probs=34.9
Q ss_pred EEEEEEe---C------CeeeC-ceeecCCCCC------HHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF---N------GEWGI-PGGFIEGKET------YMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR---~------g~WaL-PGG~Vd~GEs------l~~aa~REl~EEtGl~~~ 214 (362)
+||+++| . |.|.+ |||+|++||+ +.+||+||++||||+++.
T Consensus 80 rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtGl~v~ 136 (211)
T 3e57_A 80 RVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLR 136 (211)
T ss_dssp EEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEEEEEE
T ss_pred EEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhCCeee
Confidence 5899998 2 58999 9999999998 599999999999999754
No 60
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=98.97 E-value=1.4e-09 Score=95.60 Aligned_cols=41 Identities=22% Similarity=0.224 Sum_probs=37.0
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|+++| .|.|.||||++++||++.+||+||+.||||+.+.
T Consensus 54 ~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~ 100 (182)
T 2yvp_A 54 TALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAE 100 (182)
T ss_dssp EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECS
T ss_pred EEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcc
Confidence 5788887 4689999999999999999999999999999764
No 61
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=98.96 E-value=2.4e-09 Score=95.07 Aligned_cols=42 Identities=21% Similarity=0.254 Sum_probs=37.8
Q ss_pred eEEEEEEe-------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 173 LEFVTVKF-------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 173 LevLlIkR-------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
+++|+++| .|.|.||||++++||++.+||+||+.||||+.+.
T Consensus 48 ~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~ 96 (194)
T 1nqz_A 48 PRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPA 96 (194)
T ss_dssp CBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGG
T ss_pred eEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCcc
Confidence 45788887 4889999999999999999999999999999764
No 62
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=98.96 E-value=7.3e-09 Score=93.93 Aligned_cols=41 Identities=27% Similarity=0.216 Sum_probs=36.0
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|++++ .+.|.||||++|+||++.+||+||+.||||+...
T Consensus 78 ~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~ 124 (212)
T 2dsc_A 78 CIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGD 124 (212)
T ss_dssp EEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCE
T ss_pred EEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCcc
Confidence 5777764 3479999999999999999999999999999764
No 63
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=98.95 E-value=1.4e-09 Score=94.63 Aligned_cols=40 Identities=28% Similarity=0.376 Sum_probs=35.8
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|++++ .|.|.||||++|+||++.+||+||+.||||+ ..
T Consensus 46 ~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~ 91 (170)
T 1v8y_A 46 RMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SG 91 (170)
T ss_dssp EEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EE
T ss_pred EEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-Cc
Confidence 5778876 4689999999999999999999999999999 54
No 64
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=98.89 E-value=2.5e-09 Score=97.44 Aligned_cols=41 Identities=24% Similarity=0.472 Sum_probs=38.6
Q ss_pred EEEEEEe-CCeeeCceeecCCCC-CHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF-NGEWGIPGGFIEGKE-TYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR-~g~WaLPGG~Vd~GE-sl~~aa~REl~EEtGl~~~ 214 (362)
++|+++| .|.|.||||+|++|| ++.+||+||+.||||+.+.
T Consensus 57 ~vLl~~r~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~ 99 (212)
T 1u20_A 57 VLLMMMRFDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALA 99 (212)
T ss_dssp EEEEEEETTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGG
T ss_pred EEEEEEeCCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCcc
Confidence 6888888 999999999999999 9999999999999999765
No 65
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=98.87 E-value=3.4e-09 Score=95.78 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=36.9
Q ss_pred EEEEEEe------CCeeeCceeecC-CCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF------NGEWGIPGGFIE-GKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd-~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|++++ .+.|.||||+|+ +||++.+||+||+.||||+.+.
T Consensus 56 ~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~ 103 (207)
T 1mk1_A 56 NIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQAS 103 (207)
T ss_dssp EEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEE
T ss_pred EEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCccc
Confidence 5788876 468999999999 9999999999999999999765
No 66
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=98.82 E-value=1.7e-08 Score=90.07 Aligned_cols=40 Identities=18% Similarity=0.094 Sum_probs=33.7
Q ss_pred EEEEEEe-C-----------CeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF-N-----------GEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR-~-----------g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|++++ . +.|.||||++| ||++.+||+||+.||||+...
T Consensus 59 ~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~ 110 (191)
T 3o6z_A 59 TVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVG 110 (191)
T ss_dssp EEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCS
T ss_pred EEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccC
Confidence 5777765 1 46999999999 999999999999999999764
No 67
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=98.81 E-value=1.5e-08 Score=91.99 Aligned_cols=41 Identities=29% Similarity=0.252 Sum_probs=35.6
Q ss_pred EEEEEEe-----C------CeeeCceeecCCCCCHHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF-----N------GEWGIPGGFIEGKETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR-----~------g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~ 214 (362)
++|++++ . +.|.||||++|+||++.+||+||+.||||+...
T Consensus 71 ~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~ 122 (209)
T 1g0s_A 71 EVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVK 122 (209)
T ss_dssp EEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCC
T ss_pred EEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccC
Confidence 5777764 2 569999999999999999999999999999764
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.79 E-value=8.9e-09 Score=101.56 Aligned_cols=102 Identities=12% Similarity=0.082 Sum_probs=70.4
Q ss_pred EEEEEEe------CCeeeCceeecCCCCCHHHHHHHHHHHHhccccccchhhhHHHHHHHHHHhccCceEEEecccccCC
Q psy13138 174 EFVTVKF------NGEWGIPGGFIEGKETYMDRGRKEFLEEALNASNMTAKESKSILKHLETVMDDNCHFVYRGYMKDER 247 (362)
Q Consensus 174 evLlIkR------~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl~~~~s~~~~~~~~~~l~~lfs~~g~~vy~gyvdDpR 247 (362)
+||++|| .|.|.||||.+++| +..+|+.||+.||||+.+... +++.. ..++|
T Consensus 253 ~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~------------~~l~~-~~h~~-------- 310 (369)
T 3fsp_A 253 RVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELT------------EPIVS-FEHAF-------- 310 (369)
T ss_dssp EEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEEC------------CCCCE-EEEEC--------
T ss_pred EEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeee------------ccccc-EEEEc--------
Confidence 6899998 48899999999999 999999999999999987532 01110 12222
Q ss_pred CCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCC--CCCCCcCHHHHHHHHHHHh
Q psy13138 248 NTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHS--DMTFNPTHKTFMKVVTDIH 309 (362)
Q Consensus 248 NTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~--~lpL~asH~~iL~~a~~~~ 309 (362)
++.. +...+|.+....+ .++..+++|+++++ ++++.+.++.+|+.+.+.+
T Consensus 311 -~h~~-~~~~~~~~~~~~~----------~~e~~~~~Wv~~~el~~~~l~~~~~~il~~l~~~~ 362 (369)
T 3fsp_A 311 -SHLV-WQLTVFPGRLVHG----------GPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWA 362 (369)
T ss_dssp -SSEE-EEEEEEEEEECCS----------SCCCTTEEEEEGGGGGGSCCCHHHHHHHHHHHHHT
T ss_pred -ceEE-EEEEEEEEEEcCC----------CCCccccEEeeHHHhhhCCCCHHHHHHHHHHHHHh
Confidence 1112 3344555554322 23456799999995 3458888999998887654
No 69
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.77 E-value=2.8e-08 Score=92.39 Aligned_cols=145 Identities=14% Similarity=0.116 Sum_probs=86.9
Q ss_pred CCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe-------CCeeeCceeecCCCCC-------------------
Q psy13138 143 PNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF-------NGEWGIPGGFIEGKET------------------- 196 (362)
Q Consensus 143 PNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR-------~g~WaLPGG~Vd~GEs------------------- 196 (362)
|.+|+-.|+.| +..+| -++||+++| .|.|.||||.||++|+
T Consensus 7 ~r~aA~lill~--~~~~g-----------~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~ 73 (232)
T 3qsj_A 7 IRKAATLVVIR--DGANK-----------DIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDP 73 (232)
T ss_dssp EEEEEEEEEEE--ECGGG-----------CEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHH
T ss_pred CcceEEEEEEE--cCCCC-----------CeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhh
Confidence 45677777776 21111 168999999 4899999999999997
Q ss_pred -HHHHHHHHHHHHhccccccchh------------hhHHHH---HHHHHHhcc-------CceEEEecccccCCCCCccE
Q psy13138 197 -YMDRGRKEFLEEALNASNMTAK------------ESKSIL---KHLETVMDD-------NCHFVYRGYMKDERNTDNAW 253 (362)
Q Consensus 197 -l~~aa~REl~EEtGl~~~~s~~------------~~~~~~---~~l~~lfs~-------~g~~vy~gyvdDpRNTDnAW 253 (362)
+..||+||++||||+.+..... .|..++ ..+.+++.. ....-+...+. |. .....
T Consensus 74 a~~~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiT-P~-~~~rR 151 (232)
T 3qsj_A 74 ALAVTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVT-PP-TQPVR 151 (232)
T ss_dssp HHHHHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEEC-CT-TSSSE
T ss_pred HHHHHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcC-Cc-CCcee
Confidence 5899999999999997653111 111111 123333332 01222222221 11 12246
Q ss_pred EEEEEEEEEecCCCcccccC-CCCCCcccceEEEecCC--------CCCCCcCHHHHHHHHHH
Q psy13138 254 VEGAVTTVHDKKGEHFMALP-LSPGDGAEDVKWLIVHS--------DMTFNPTHKTFMKVVTD 307 (362)
Q Consensus 254 ietva~~~h~~~g~~~~~~~-l~a~dda~~v~W~~vd~--------~lpL~asH~~iL~~a~~ 307 (362)
..|.+|.+..... .. ...++|..+++|++..+ ++.|.+-...+|...++
T Consensus 152 fdT~FFla~lpq~-----~~v~~d~~E~~~~~W~~p~eal~~~~~G~i~L~pPT~~~L~~L~~ 209 (232)
T 3qsj_A 152 FDTRFFLCVGQHL-----GEPRLHGAELDAALWTPARDMLTRIQSGELPAVRPTIAVLKALVA 209 (232)
T ss_dssp EEEEEEEEECSSC-----CCCCCCSSSEEEEEEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCC-----CCCCCCCCceEEEEEEcHHHHHHHHHcCCceechhHHHHHHHHHc
Confidence 7888887665411 11 22467889999999985 34466666666666543
No 70
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.76 E-value=7.5e-09 Score=95.06 Aligned_cols=40 Identities=28% Similarity=0.499 Sum_probs=36.5
Q ss_pred EEEEEe-CCeeeCceeecCCCC-CHHHHHHHHHHHHhccccc
Q psy13138 175 FVTVKF-NGEWGIPGGFIEGKE-TYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 175 vLlIkR-~g~WaLPGG~Vd~GE-sl~~aa~REl~EEtGl~~~ 214 (362)
+|+++| .|.|.||||+||+|| ++.+||+||+.||||+.+.
T Consensus 67 ~ll~~r~~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~ 108 (217)
T 2xsq_A 67 ILMQMRFDGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAA 108 (217)
T ss_dssp EEEEEETTSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGG
T ss_pred EEEEEccCCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCc
Confidence 566667 899999999999999 9999999999999999765
No 71
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=98.72 E-value=4.2e-08 Score=90.20 Aligned_cols=33 Identities=15% Similarity=0.042 Sum_probs=30.9
Q ss_pred CeeeCceeecCC-CCCHHHHHHHHHHHHhccccc
Q psy13138 182 GEWGIPGGFIEG-KETYMDRGRKEFLEEALNASN 214 (362)
Q Consensus 182 g~WaLPGG~Vd~-GEsl~~aa~REl~EEtGl~~~ 214 (362)
+.|.||||+||+ ||++.+||+||+.||||+.+.
T Consensus 95 ~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~ 128 (218)
T 3q91_A 95 VTVELCAGLVDQPGLSLEEVACKEAWEECGYHLA 128 (218)
T ss_dssp EEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCC
T ss_pred eEEECCcceeCCCCCCHHHHHHHHHHHHhCCccc
Confidence 579999999999 999999999999999999873
No 72
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.57 E-value=9e-08 Score=93.02 Aligned_cols=111 Identities=13% Similarity=0.156 Sum_probs=75.7
Q ss_pred CCCccceEEEEEeeecCCCCeEeccCCCCCeeEEEEEEeCCeeeCceeecCCCCCHHHHHHHHHHHHh-ccccccchhhh
Q psy13138 142 GPNHSAFLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKFNGEWGIPGGFIEGKETYMDRGRKEFLEEA-LNASNMTAKES 220 (362)
Q Consensus 142 GPNhAad~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR~g~WaLPGG~Vd~GEsl~~aa~REl~EEt-Gl~~~~s~~~~ 220 (362)
+|...+.+||.+ ++ ++||+.+.| |+||||.++.+++ +++.||+.||| |+.+++.
T Consensus 181 ~p~~~vgaii~~--------------~g----~vLL~~~~G-W~LPG~~~~~~~~--~~a~RE~~EEttGl~v~~~---- 235 (321)
T 3rh7_A 181 EGEIRLGAVLEQ--------------QG----AVFLAGNET-LSLPNCTVEGGDP--ARTLAAYLEQLTGLNVTIG---- 235 (321)
T ss_dssp HSCEEEEEEEES--------------SS----CEEEBCSSE-EBCCEEEESSSCH--HHHHHHHHHHHHSSCEEEE----
T ss_pred CCcceEEEEEEE--------------CC----EEEEeeCCC-ccCCcccCCCChh--HHHHHHHHHHhcCCEEeec----
Confidence 477777777775 22 356662378 9999997765554 68999999997 9998752
Q ss_pred HHHHHHHHHHhccCceEEEecccccCCCCCccEEEEEEEEEEecCCCcccccCCCCCCcccceEEEecCCCCC----CCc
Q psy13138 221 KSILKHLETVMDDNCHFVYRGYMKDERNTDNAWVEGAVTTVHDKKGEHFMALPLSPGDGAEDVKWLIVHSDMT----FNP 296 (362)
Q Consensus 221 ~~~~~~l~~lfs~~g~~vy~gyvdDpRNTDnAWietva~~~h~~~g~~~~~~~l~a~dda~~v~W~~vd~~lp----L~a 296 (362)
.+ ..+| +++. ++ ...++|.++..+|+ +.+++|++++ +|| .+.
T Consensus 236 --------~L-----~~v~----~~~~--~~--~~~i~f~~~~~~g~------------~~e~~~f~~~-elp~~~~~~~ 281 (321)
T 3rh7_A 236 --------FL-----YSVY----EDKS--DG--RQNIVYHALASDGA------------PRQGRFLRPA-ELAAAKFSSS 281 (321)
T ss_dssp --------EE-----EEEE----ECTT--TC--CEEEEEEEEECSSC------------CSSSEEECHH-HHTTCEESSH
T ss_pred --------eE-----EEEE----EcCC--Cc--eEEEEEEEEeCCCC------------eeeeEEECHH-HCCCcccCCH
Confidence 11 2344 2332 22 23567777765442 2579999999 777 357
Q ss_pred CHHHHHHHHHHHhcC
Q psy13138 297 THKTFMKVVTDIHGA 311 (362)
Q Consensus 297 sH~~iL~~a~~~~~a 311 (362)
.++.+|+...+.++.
T Consensus 282 ~~~~~L~~y~~e~~~ 296 (321)
T 3rh7_A 282 ATADIINRFVLESSI 296 (321)
T ss_dssp HHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhhc
Confidence 899999998887765
No 73
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.39 E-value=1.7e-07 Score=84.95 Aligned_cols=61 Identities=16% Similarity=0.160 Sum_probs=45.2
Q ss_pred CccceEEEEEeeecC-CCCeEeccCCCCCeeEEEEEEe-CCeeeCceeecCCCC-CHHHHHHHHHHHHhcc
Q psy13138 144 NHSAFLIVTRWFRDH-NGDKVTMPSSGKPLLEFVTVKF-NGEWGIPGGFIEGKE-TYMDRGRKEFLEEALN 211 (362)
Q Consensus 144 NhAad~VVtRw~~~~-~G~iv~~~~~~k~vLevLlIkR-~g~WaLPGG~Vd~GE-sl~~aa~REl~EEtGl 211 (362)
.||+.+.+..-.... -|.+-++ -.+|+..| .|.|.||||+||+|| |+++|++||+.||+|+
T Consensus 21 ~hach~mlya~~~~~lfg~~p~r-------~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~ 84 (214)
T 3kvh_A 21 SHSCHAMLYAANPGQLFGRIPMR-------FSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGC 84 (214)
T ss_dssp EEEEEEEEEEEEEEEETTTEEEE-------EEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC--
T ss_pred cEeeEEEEEcCCccccccccchh-------heEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCC
Confidence 599999998732110 1333322 13666677 999999999999999 9999999999999996
No 74
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=98.34 E-value=6e-06 Score=79.49 Aligned_cols=69 Identities=17% Similarity=0.067 Sum_probs=52.3
Q ss_pred ccccccccCccCCCccc-eEEEEEeeecCCCCeEeccCCCCCeeEEEEEEe-------CCee-eCceeecCCCCCHHHHH
Q psy13138 131 GICGRGLLGRWGPNHSA-FLIVTRWFRDHNGDKVTMPSSGKPLLEFVTVKF-------NGEW-GIPGGFIEGKETYMDRG 201 (362)
Q Consensus 131 Gl~GRG~L~rwGPNhAa-d~VVtRw~~~~~G~iv~~~~~~k~vLevLlIkR-------~g~W-aLPGG~Vd~GEsl~~aa 201 (362)
|...|+....+|=-|.+ ...++. ++ | .-+++|+.|| .|.| .++||++++||++.+||
T Consensus 104 ~~~eR~~~~~~G~~~~~vh~~~~~--~~--~----------~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA 169 (300)
T 3dup_A 104 MLLDRAVVPTFGVRAYGVHLNGYV--GA--G----------ADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNL 169 (300)
T ss_dssp EEEEGGGTGGGTCCEEEEEEEEEE--SC--G----------GGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHH
T ss_pred EEEEhhhccccceEEEEEEEEEEE--ec--C----------CeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHH
Confidence 55678877777766554 333333 21 1 1257888888 7899 69999999999999999
Q ss_pred HHHHHHHhcccc
Q psy13138 202 RKEFLEEALNAS 213 (362)
Q Consensus 202 ~REl~EEtGl~~ 213 (362)
+||+.||+|+..
T Consensus 170 ~REl~EElGI~~ 181 (300)
T 3dup_A 170 IKECAEEADLPE 181 (300)
T ss_dssp HHHHHHHHCCCH
T ss_pred HHHHHHHhCCCh
Confidence 999999999964
No 75
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=98.27 E-value=6.8e-06 Score=76.14 Aligned_cols=41 Identities=5% Similarity=-0.055 Sum_probs=35.1
Q ss_pred EEEEEEe-------CCeeeCc-eeecCCC------CC---HHHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF-------NGEWGIP-GGFIEGK------ET---YMDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR-------~g~WaLP-GG~Vd~G------Es---l~~aa~REl~EEtGl~~~ 214 (362)
++|+.+| .|.|.+| ||++++| |+ +.+||+||+.||||+...
T Consensus 72 ~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~ 129 (235)
T 2dho_A 72 KLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELGIPLE 129 (235)
T ss_dssp CEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCGG
T ss_pred EEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHCCCcc
Confidence 4677887 4799999 5999999 78 599999999999999754
No 76
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=98.26 E-value=6.8e-06 Score=76.72 Aligned_cols=41 Identities=5% Similarity=-0.079 Sum_probs=35.3
Q ss_pred EEEEEEe-------CCeeeCce-eecCCC------CCH---HHHHHHHHHHHhccccc
Q psy13138 174 EFVTVKF-------NGEWGIPG-GFIEGK------ETY---MDRGRKEFLEEALNASN 214 (362)
Q Consensus 174 evLlIkR-------~g~WaLPG-G~Vd~G------Esl---~~aa~REl~EEtGl~~~ 214 (362)
++|+.+| .|.|.+|+ |++++| |+. .+||+||+.||||+...
T Consensus 83 ~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElGi~~~ 140 (246)
T 2pny_A 83 RILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGE 140 (246)
T ss_dssp CEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHCCCTT
T ss_pred EEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHCCCcc
Confidence 4677888 47899995 999999 886 99999999999999754
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.13 E-value=3e-06 Score=77.21 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=36.8
Q ss_pred eEEEEEEe-CCeeeCceeecCCCCCHHHHHHHHHHHHhcc
Q psy13138 173 LEFVTVKF-NGEWGIPGGFIEGKETYMDRGRKEFLEEALN 211 (362)
Q Consensus 173 LevLlIkR-~g~WaLPGG~Vd~GEsl~~aa~REl~EEtGl 211 (362)
-++|++|+ ++.|.||||.+++||+..+|++||+.||.|.
T Consensus 73 phVLLlq~~~~~f~LPGGkle~gE~~~eaL~REL~EELg~ 112 (208)
T 3bho_A 73 PHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGR 112 (208)
T ss_dssp EEEEEEEEETTEEECSEEECCTTCCHHHHHHHHHHHHHCC
T ss_pred cEEEEEEcCCCcEECCCcccCCCCCHHHHHHHHHHHHhCC
Confidence 47899998 8999999999999999999999999999996
Done!