BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13141
(84 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Paratuberculosis
Length = 291
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60
MA RD K +T QV V++LDL L SVR FA D VLINNAG
Sbjct: 45 MAVRDTRKGEAA-----ARTMAGQVEVRELDLQDLSSVRRFA----DGVSGADVLINNAG 95
Query: 61 QGGILNRITKDGLQ 74
+ +T DG +
Sbjct: 96 IMAVPYALTVDGFE 109
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60
+A R L K ++++I + N +V V +LD+ + ++ F + E K I +L+NNAG
Sbjct: 65 LAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG 124
Query: 61 QG 62
+
Sbjct: 125 KA 126
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 32.7 bits (73), Expect = 0.049, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 31 DLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83
D++ + + E +IL E K++ +L+NNAG IT+D L L M+ D+ E
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAG-------ITRDNLFLRMKNDEWE 146
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 31 DLASLDSVREFAAQILDEEKHIHVLINNAGQG--GILNRITKDGLQLGM 77
D++ + VR I++ HI L+NNAG G G L+ +T++ M
Sbjct: 66 DISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTM 114
>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
pdb|3TN7|B Chain B, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
Length = 257
Score = 30.0 bits (66), Expect = 0.31, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62
+V LD++ +SV EF+ ++L+ + V++ NAG G
Sbjct: 75 EVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLG 113
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
Length = 247
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 7/44 (15%)
Query: 30 LDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGL 73
L+++ ++S++ F A+I E I +L+NNAG IT+D L
Sbjct: 61 LNISDIESIQNFFAEIKAENLAIDILVNNAG-------ITRDNL 97
>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon
Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp
Length = 235
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62
+V LD++ +SV EF+ ++L+ + V++ NAG G
Sbjct: 53 EVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLG 91
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 29.3 bits (64), Expect = 0.63, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60
+ RD+ K V I+ + DL+ D++ FA +L VL+NNAG
Sbjct: 58 LTARDVEKLRAVEREIVAAGGEAES--HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAG 115
Query: 61 QG 62
G
Sbjct: 116 VG 117
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQ 78
VVV K D+ + + V +D I +L+NNAG IT+D L L M
Sbjct: 57 VVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAG-------ITRDTLMLKMS 103
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQ 78
V V +L+ S+++ A E + I +L+NNAG IT+DGL + MQ
Sbjct: 75 VFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAG-------ITRDGLFVRMQ 121
>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
pdb|3O38|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 266
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 31 DLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63
D+ S ++V Q +++ + VL+NNAG GG
Sbjct: 81 DVTSTEAVDALITQTVEKAGRLDVLVNNAGLGG 113
>pdb|3U9L|A Chain A, The Crystal Structure Of
3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From
Sinorhizobium Meliloti
Length = 324
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 19 KTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61
+ N+ + +LD+ S SV QI+ E+ I VLI+NAG
Sbjct: 55 RDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGH 97
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNR 67
KAN V + I K + + D+A+ + V Q +D + +L+NNAG
Sbjct: 41 KANEVVDEI--KKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAG------- 91
Query: 68 ITKDGLQLGMQ 78
+TKD L + M+
Sbjct: 92 VTKDNLLMRMK 102
>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|B Chain B, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|C Chain C, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|D Chain D, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
Length = 280
Score = 26.2 bits (56), Expect = 4.5, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 1 MACRDLGKANGVRESIITKTN-NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNA 59
+A +G A GV I + +V+ + DLA L S + ++ E I L+NNA
Sbjct: 56 IAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNA 115
Query: 60 GQGGIL 65
G I+
Sbjct: 116 GIASIV 121
>pdb|2ASB|A Chain A, Structure Of A Mycobacterium Tuberculosis Nusa-Rna
Complex
pdb|2ATW|A Chain A, Structure Of A Mycobacterium Tuberculosis Nusa-Rna
Complex
pdb|2ATW|C Chain C, Structure Of A Mycobacterium Tuberculosis Nusa-Rna
Complex
Length = 251
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 1 MACRDLGKANGVRESIITKTNNHQVVVKKL 30
+ C +G G RE +IT + H +V+KL
Sbjct: 59 LRCYVVGVTRGAREPLITLSRTHPNLVRKL 88
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 26.2 bits (56), Expect = 5.1, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 30 LDLASLDSVREFAAQILDEEKHIHVLINNAG 60
LD+ SV FA +D I VL+NNAG
Sbjct: 60 LDVTDRHSVAAFAQAAVDTWGRIDVLVNNAG 90
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 26.2 bits (56), Expect = 5.5, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
Query: 29 KLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQID 80
K D++ V A +++ + VL+NNAG IT+D L L M+ D
Sbjct: 84 KADVSQESEVEALFAAVIERWGRLDVLVNNAG-------ITRDTLLLRMKRD 128
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 26.2 bits (56), Expect = 5.5, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 30 LDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77
+D+A +S A ++L + + VLINNAG IT+D + M
Sbjct: 82 VDVADFESCERCAEKVLADFGKVDVLINNAG-------ITRDATFMKM 122
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 31 DLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63
D+ DSVR +++ + VL NNAG G
Sbjct: 82 DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGA 114
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQ 78
++ V +L+ ++V+ + +E + +L+NNAG IT+DGL + M
Sbjct: 56 ERIFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAG-------ITRDGLFVRMS 104
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQ 78
++ V +L+ ++V+ + +E + +L+NNAG IT+DGL + M
Sbjct: 53 ERIFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAG-------ITRDGLFVRMS 101
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 31 DLASLDSVREFAAQILDEEKHIHVLINNAG 60
D+ D ++ AQI E I +L+NNAG
Sbjct: 91 DVTDEDGIQAMVAQIESEVGIIDILVNNAG 120
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 30 LDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQ 78
L++ + +S+ I DE + +L+NNAG IT+D L + M+
Sbjct: 65 LNVTNPESIEAVLKAITDEFGGVDILVNNAG-------ITRDNLLMRMK 106
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 30 LDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQ 78
L++ + +S+ I DE + +L+NNAG IT+D L + M+
Sbjct: 65 LNVTNPESIEAVLKAITDEFGGVDILVNNAG-------ITRDNLLMRMK 106
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 30 LDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQ 78
L++ + +S+ I DE + +L+NNAG IT+D L + M+
Sbjct: 65 LNVTNPESIEAVLKAITDEFGGVDILVNNAG-------ITRDNLLMRMK 106
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,230,334
Number of Sequences: 62578
Number of extensions: 71669
Number of successful extensions: 356
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 323
Number of HSP's gapped (non-prelim): 45
length of query: 84
length of database: 14,973,337
effective HSP length: 52
effective length of query: 32
effective length of database: 11,719,281
effective search space: 375016992
effective search space used: 375016992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)