Query psy13141
Match_columns 84
No_of_seqs 130 out of 1366
Neff 11.1
Searched_HMMs 46136
Date Fri Aug 16 20:37:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13141.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13141hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1205|consensus 99.8 4.1E-18 8.9E-23 96.5 7.3 83 2-84 42-126 (282)
2 COG0300 DltE Short-chain dehyd 99.7 1.1E-17 2.4E-22 94.2 6.1 82 1-83 35-118 (265)
3 COG4221 Short-chain alcohol de 99.7 1.5E-17 3.3E-22 92.0 6.1 79 1-83 35-115 (246)
4 KOG1208|consensus 99.7 2.1E-16 4.6E-21 91.2 6.4 84 1-84 64-147 (314)
5 KOG1201|consensus 99.6 1.5E-15 3.2E-20 86.2 6.1 79 2-83 68-148 (300)
6 PRK05854 short chain dehydroge 99.6 4.2E-15 9E-20 85.9 7.1 83 2-84 44-127 (313)
7 PRK07062 short chain dehydroge 99.6 1.8E-14 3.8E-19 81.3 7.0 82 2-83 38-121 (265)
8 PF00106 adh_short: short chai 99.6 1.7E-14 3.6E-19 76.5 5.9 80 2-83 31-114 (167)
9 PRK06139 short chain dehydroge 99.5 3.6E-14 7.8E-19 82.6 7.1 80 2-83 37-118 (330)
10 PRK05867 short chain dehydroge 99.5 6.5E-14 1.4E-18 78.6 7.1 81 2-84 39-121 (253)
11 PRK07791 short chain dehydroge 99.5 7.3E-14 1.6E-18 79.8 6.8 76 7-84 50-127 (286)
12 PRK05876 short chain dehydroge 99.5 8.7E-14 1.9E-18 79.2 7.0 81 2-84 36-118 (275)
13 PRK07063 short chain dehydroge 99.5 1.1E-13 2.5E-18 77.8 6.9 82 2-83 37-120 (260)
14 PRK07478 short chain dehydroge 99.5 9.7E-14 2.1E-18 77.9 6.4 80 2-83 36-118 (254)
15 PLN00015 protochlorophyllide r 99.5 9.8E-14 2.1E-18 80.0 6.5 81 2-84 28-111 (308)
16 PRK08339 short chain dehydroge 99.5 1.4E-13 3.1E-18 77.8 7.0 80 2-83 38-119 (263)
17 KOG0725|consensus 99.5 1.6E-13 3.5E-18 78.1 6.9 83 1-83 37-124 (270)
18 PRK06079 enoyl-(acyl carrier p 99.5 1.5E-13 3.2E-18 77.3 6.3 61 23-83 55-121 (252)
19 PRK08415 enoyl-(acyl carrier p 99.5 2.1E-13 4.5E-18 77.7 6.8 59 26-84 58-122 (274)
20 PRK07109 short chain dehydroge 99.5 2E-13 4.4E-18 79.6 6.6 80 2-83 38-119 (334)
21 PRK06197 short chain dehydroge 99.5 2.3E-13 5.1E-18 78.3 6.7 82 2-83 46-127 (306)
22 PRK07370 enoyl-(acyl carrier p 99.5 2.2E-13 4.8E-18 76.9 6.5 74 9-84 47-126 (258)
23 PRK07984 enoyl-(acyl carrier p 99.5 2E-13 4.3E-18 77.3 6.0 78 3-83 39-123 (262)
24 COG3967 DltE Short-chain dehyd 99.5 1.2E-13 2.5E-18 75.3 4.8 78 1-84 34-115 (245)
25 PRK08862 short chain dehydroge 99.5 3.2E-13 7E-18 75.1 6.7 80 2-83 35-118 (227)
26 TIGR01289 LPOR light-dependent 99.5 2.9E-13 6.4E-18 78.3 6.8 81 2-84 34-117 (314)
27 PRK05599 hypothetical protein; 99.5 3.1E-13 6.6E-18 75.8 6.3 81 2-83 29-111 (246)
28 PRK08589 short chain dehydroge 99.5 4.6E-13 1E-17 76.0 7.0 79 2-83 36-117 (272)
29 PRK05855 short chain dehydroge 99.5 3.3E-13 7.1E-18 82.7 6.8 80 2-83 345-426 (582)
30 PRK07677 short chain dehydroge 99.5 4.9E-13 1.1E-17 75.0 6.8 81 2-84 31-113 (252)
31 PRK05872 short chain dehydroge 99.4 4.1E-13 8.9E-18 77.1 6.4 79 2-83 39-119 (296)
32 PRK06505 enoyl-(acyl carrier p 99.4 4.1E-13 8.8E-18 76.3 6.3 59 26-84 60-124 (271)
33 PRK09242 tropinone reductase; 99.4 6.3E-13 1.4E-17 74.7 7.0 82 2-83 39-122 (257)
34 PRK07533 enoyl-(acyl carrier p 99.4 4.2E-13 9.2E-18 75.7 6.2 60 25-84 62-127 (258)
35 PRK12481 2-deoxy-D-gluconate 3 99.4 8.1E-13 1.7E-17 74.3 7.2 72 11-84 45-118 (251)
36 KOG1200|consensus 99.4 3.8E-13 8.3E-18 73.0 5.5 79 3-84 45-125 (256)
37 PRK08643 acetoin reductase; Va 99.4 8.8E-13 1.9E-17 74.1 6.9 80 2-83 32-113 (256)
38 PRK08085 gluconate 5-dehydroge 99.4 7.7E-13 1.7E-17 74.3 6.7 80 2-83 39-120 (254)
39 KOG4169|consensus 99.4 7.9E-13 1.7E-17 73.0 6.4 67 11-83 43-109 (261)
40 PRK08159 enoyl-(acyl carrier p 99.4 6.5E-13 1.4E-17 75.5 6.2 60 25-84 62-127 (272)
41 PRK07097 gluconate 5-dehydroge 99.4 1E-12 2.2E-17 74.2 6.9 80 2-83 40-121 (265)
42 PRK07889 enoyl-(acyl carrier p 99.4 5.5E-13 1.2E-17 75.2 5.5 61 24-84 58-124 (256)
43 PRK06603 enoyl-(acyl carrier p 99.4 8.4E-13 1.8E-17 74.6 6.2 78 3-83 41-124 (260)
44 PRK08303 short chain dehydroge 99.4 8.2E-13 1.8E-17 76.3 6.2 75 7-83 53-134 (305)
45 PRK08690 enoyl-(acyl carrier p 99.4 9.4E-13 2E-17 74.4 6.0 73 9-83 44-123 (261)
46 PRK06114 short chain dehydroge 99.4 1.9E-12 4.2E-17 72.8 7.1 80 3-84 39-121 (254)
47 PRK07453 protochlorophyllide o 99.4 1.2E-12 2.6E-17 75.8 6.4 80 2-83 36-118 (322)
48 PRK07831 short chain dehydroge 99.4 2E-12 4.4E-17 72.9 7.1 82 2-83 48-131 (262)
49 PRK06194 hypothetical protein; 99.4 2E-12 4.4E-17 73.7 7.1 80 2-83 36-117 (287)
50 PRK06172 short chain dehydroge 99.4 2.1E-12 4.5E-17 72.5 6.6 80 2-83 37-119 (253)
51 PRK08340 glucose-1-dehydrogena 99.4 2.3E-12 5.1E-17 72.6 6.8 79 2-83 30-112 (259)
52 PRK08251 short chain dehydroge 99.4 2.8E-12 6.1E-17 71.7 7.1 82 2-83 32-115 (248)
53 PRK12859 3-ketoacyl-(acyl-carr 99.4 2.9E-12 6.3E-17 72.2 7.0 74 9-84 56-131 (256)
54 PRK05650 short chain dehydroge 99.4 2.8E-12 6.1E-17 72.6 6.8 80 2-83 30-111 (270)
55 PRK08265 short chain dehydroge 99.4 3.1E-12 6.8E-17 72.2 6.7 77 2-83 36-113 (261)
56 PRK07523 gluconate 5-dehydroge 99.4 3.2E-12 6.9E-17 71.8 6.7 80 2-83 40-121 (255)
57 PRK08594 enoyl-(acyl carrier p 99.4 2.2E-12 4.8E-17 72.8 6.1 62 22-83 58-125 (257)
58 PRK06124 gluconate 5-dehydroge 99.4 3E-12 6.6E-17 71.9 6.6 80 2-83 41-122 (256)
59 PRK06484 short chain dehydroge 99.4 2.1E-12 4.6E-17 78.8 6.3 78 2-84 299-379 (520)
60 PRK12384 sorbitol-6-phosphate 99.4 5.5E-12 1.2E-16 71.0 7.5 82 2-83 32-115 (259)
61 PRK07890 short chain dehydroge 99.4 3.6E-12 7.8E-17 71.6 6.6 80 2-83 35-117 (258)
62 PF13561 adh_short_C2: Enoyl-( 99.4 1.5E-12 3.2E-17 72.8 4.9 80 1-83 25-111 (241)
63 PRK06997 enoyl-(acyl carrier p 99.4 2.5E-12 5.5E-17 72.7 5.9 59 26-84 59-124 (260)
64 PRK08993 2-deoxy-D-gluconate 3 99.4 3.9E-12 8.4E-17 71.5 6.6 72 11-84 47-120 (253)
65 PLN02253 xanthoxin dehydrogena 99.4 4E-12 8.8E-17 72.3 6.5 78 3-83 49-130 (280)
66 PRK08277 D-mannonate oxidoredu 99.4 5.1E-12 1.1E-16 71.8 6.9 80 2-83 40-136 (278)
67 PRK06128 oxidoreductase; Provi 99.4 5E-12 1.1E-16 72.7 7.0 74 8-83 93-169 (300)
68 TIGR02415 23BDH acetoin reduct 99.4 5.8E-12 1.3E-16 70.6 7.0 80 2-83 30-111 (254)
69 PRK08416 7-alpha-hydroxysteroi 99.4 5.7E-12 1.2E-16 71.1 6.9 79 4-83 41-127 (260)
70 PRK08278 short chain dehydroge 99.3 5.7E-12 1.2E-16 71.6 6.7 74 9-84 50-125 (273)
71 PRK07454 short chain dehydroge 99.3 6.2E-12 1.3E-16 70.1 6.7 80 2-83 36-117 (241)
72 PRK06935 2-deoxy-D-gluconate 3 99.3 6.4E-12 1.4E-16 70.7 6.8 78 3-83 46-125 (258)
73 PRK08063 enoyl-(acyl carrier p 99.3 8.7E-12 1.9E-16 69.8 7.3 79 3-83 36-116 (250)
74 PRK12743 oxidoreductase; Provi 99.3 8.7E-12 1.9E-16 70.2 6.9 78 4-83 35-114 (256)
75 TIGR01500 sepiapter_red sepiap 99.3 8.5E-12 1.8E-16 70.3 6.9 83 2-84 34-125 (256)
76 PRK06484 short chain dehydroge 99.3 5E-12 1.1E-16 77.1 6.4 78 2-84 35-116 (520)
77 PRK07792 fabG 3-ketoacyl-(acyl 99.3 1E-11 2.2E-16 71.7 7.2 74 7-83 48-123 (306)
78 PRK07814 short chain dehydroge 99.3 8.5E-12 1.8E-16 70.5 6.8 80 2-83 40-121 (263)
79 PRK09186 flagellin modificatio 99.3 1.2E-11 2.6E-16 69.4 7.1 82 2-83 34-120 (256)
80 PRK06949 short chain dehydroge 99.3 1.8E-11 4E-16 68.7 7.8 81 2-84 39-121 (258)
81 PRK07069 short chain dehydroge 99.3 1.2E-11 2.7E-16 69.1 7.0 82 2-83 29-113 (251)
82 PRK07035 short chain dehydroge 99.3 1.2E-11 2.6E-16 69.4 6.9 80 2-83 38-120 (252)
83 PRK12744 short chain dehydroge 99.3 1.5E-11 3.4E-16 69.2 7.4 76 7-84 47-124 (257)
84 PRK09134 short chain dehydroge 99.3 1.4E-11 2.9E-16 69.4 7.1 77 5-83 43-121 (258)
85 PRK06200 2,3-dihydroxy-2,3-dih 99.3 1.1E-11 2.4E-16 70.0 6.7 77 2-83 36-119 (263)
86 PRK06940 short chain dehydroge 99.3 1E-11 2.2E-16 70.7 6.5 74 2-83 30-103 (275)
87 PRK07024 short chain dehydroge 99.3 9E-12 2E-16 70.2 6.1 80 2-84 32-114 (257)
88 PRK06196 oxidoreductase; Provi 99.3 8.4E-12 1.8E-16 72.2 6.0 76 2-83 56-131 (315)
89 PRK07576 short chain dehydroge 99.3 1.4E-11 3E-16 69.7 6.7 80 2-83 39-120 (264)
90 PRK07985 oxidoreductase; Provi 99.3 1.6E-11 3.5E-16 70.5 7.1 76 7-84 86-164 (294)
91 PRK13394 3-hydroxybutyrate deh 99.3 1.8E-11 3.9E-16 68.8 7.0 80 2-83 37-118 (262)
92 PRK06113 7-alpha-hydroxysteroi 99.3 2.1E-11 4.6E-16 68.5 7.3 81 2-84 41-122 (255)
93 PRK12938 acetyacetyl-CoA reduc 99.3 1.8E-11 4E-16 68.4 7.0 77 5-83 37-115 (246)
94 PRK07832 short chain dehydroge 99.3 1.5E-11 3.2E-16 69.8 6.7 81 2-83 30-112 (272)
95 PRK08936 glucose-1-dehydrogena 99.3 1.8E-11 4E-16 69.0 7.0 76 6-83 42-119 (261)
96 PRK07666 fabG 3-ketoacyl-(acyl 99.3 1.8E-11 3.8E-16 68.2 6.7 80 2-83 37-118 (239)
97 PRK06947 glucose-1-dehydrogena 99.3 2.2E-11 4.8E-16 68.1 7.1 79 3-83 34-115 (248)
98 PRK12935 acetoacetyl-CoA reduc 99.3 2.4E-11 5.1E-16 68.0 7.1 78 4-83 39-118 (247)
99 PRK08213 gluconate 5-dehydroge 99.3 2.1E-11 4.6E-16 68.7 6.7 80 2-83 42-123 (259)
100 PRK12937 short chain dehydroge 99.3 3.6E-11 7.8E-16 67.1 7.5 75 7-83 41-117 (245)
101 KOG1199|consensus 99.3 1.1E-11 2.3E-16 66.5 5.1 63 22-84 54-124 (260)
102 PRK06123 short chain dehydroge 99.3 3E-11 6.5E-16 67.5 7.1 78 4-83 35-115 (248)
103 PRK05866 short chain dehydroge 99.3 1.9E-11 4.2E-16 70.2 6.4 80 2-83 70-153 (293)
104 PRK06138 short chain dehydroge 99.3 3.8E-11 8.2E-16 67.2 7.4 79 2-83 35-115 (252)
105 PRK07825 short chain dehydroge 99.3 1.5E-11 3.3E-16 69.7 5.7 76 2-83 35-112 (273)
106 PRK12823 benD 1,6-dihydroxycyc 99.3 2.8E-11 6.2E-16 68.1 6.7 78 3-83 39-119 (260)
107 PRK07067 sorbitol dehydrogenas 99.3 3.4E-11 7.4E-16 67.7 7.0 78 2-84 36-115 (257)
108 PRK05717 oxidoreductase; Valid 99.3 2E-11 4.4E-16 68.6 6.1 63 22-84 55-121 (255)
109 PRK12939 short chain dehydroge 99.3 3.1E-11 6.8E-16 67.4 6.7 80 2-83 37-118 (250)
110 PRK06500 short chain dehydroge 99.3 2.7E-11 5.8E-16 67.7 6.4 77 2-83 36-114 (249)
111 PRK12429 3-hydroxybutyrate deh 99.3 5.3E-11 1.2E-15 66.8 7.4 80 2-83 34-115 (258)
112 PRK08226 short chain dehydroge 99.3 4.4E-11 9.5E-16 67.5 6.9 79 2-83 36-116 (263)
113 TIGR01831 fabG_rel 3-oxoacyl-( 99.3 5E-11 1.1E-15 66.4 7.0 76 6-83 33-110 (239)
114 PRK07774 short chain dehydroge 99.2 4.3E-11 9.3E-16 67.0 6.6 80 2-83 36-120 (250)
115 PRK06198 short chain dehydroge 99.2 5.6E-11 1.2E-15 66.9 7.0 80 2-83 37-118 (260)
116 PRK06125 short chain dehydroge 99.2 4.9E-11 1.1E-15 67.2 6.7 78 2-84 37-116 (259)
117 PLN02730 enoyl-[acyl-carrier-p 99.2 1.8E-11 3.9E-16 70.8 4.9 82 3-84 41-157 (303)
118 TIGR03206 benzo_BadH 2-hydroxy 99.2 5.2E-11 1.1E-15 66.6 6.7 80 2-83 33-114 (250)
119 PRK06182 short chain dehydroge 99.2 2.8E-11 6.1E-16 68.7 5.6 60 24-83 47-108 (273)
120 PRK08263 short chain dehydroge 99.2 3.8E-11 8.3E-16 68.2 6.1 76 3-83 34-111 (275)
121 PLN02780 ketoreductase/ oxidor 99.2 3.5E-11 7.5E-16 70.0 6.0 81 2-84 83-169 (320)
122 PRK12748 3-ketoacyl-(acyl-carr 99.2 5.7E-11 1.2E-15 66.9 6.6 62 22-83 66-129 (256)
123 PRK12747 short chain dehydroge 99.2 8.1E-11 1.7E-15 66.1 7.2 79 4-84 37-123 (252)
124 TIGR03325 BphB_TodD cis-2,3-di 99.2 5.2E-11 1.1E-15 67.3 6.5 78 2-84 35-119 (262)
125 TIGR01832 kduD 2-deoxy-D-gluco 99.2 6.2E-11 1.3E-15 66.3 6.7 71 11-83 42-114 (248)
126 PRK08267 short chain dehydroge 99.2 6E-11 1.3E-15 66.8 6.4 78 2-83 31-111 (260)
127 PRK10538 malonic semialdehyde 99.2 6.1E-11 1.3E-15 66.5 6.4 77 2-83 30-109 (248)
128 PRK09730 putative NAD(P)-bindi 99.2 1.1E-10 2.4E-15 65.1 7.4 79 3-83 33-114 (247)
129 PRK06181 short chain dehydroge 99.2 7.2E-11 1.6E-15 66.6 6.5 80 2-83 31-113 (263)
130 PRK07231 fabG 3-ketoacyl-(acyl 99.2 8E-11 1.7E-15 65.8 6.6 79 2-83 35-116 (251)
131 PRK08628 short chain dehydroge 99.2 6.8E-11 1.5E-15 66.5 6.3 79 2-83 37-116 (258)
132 KOG1610|consensus 99.2 6.1E-11 1.3E-15 68.2 6.0 63 22-84 75-142 (322)
133 TIGR02632 RhaD_aldol-ADH rhamn 99.2 6.8E-11 1.5E-15 74.4 6.7 82 2-83 444-527 (676)
134 PRK06398 aldose dehydrogenase; 99.2 4E-11 8.7E-16 67.7 5.2 61 24-84 45-107 (258)
135 PRK07775 short chain dehydroge 99.2 1E-10 2.3E-15 66.5 6.8 80 2-83 40-121 (274)
136 PRK06720 hypothetical protein; 99.2 2.3E-10 4.9E-15 61.4 7.5 76 2-80 46-124 (169)
137 PRK06180 short chain dehydroge 99.2 7E-11 1.5E-15 67.3 5.8 62 22-83 49-112 (277)
138 PRK08217 fabG 3-ketoacyl-(acyl 99.2 1.4E-10 3.1E-15 64.8 7.0 80 2-83 35-125 (253)
139 PRK06701 short chain dehydroge 99.2 1.3E-10 2.9E-15 66.7 6.8 79 3-83 77-159 (290)
140 PRK09072 short chain dehydroge 99.2 1.2E-10 2.5E-15 65.8 6.5 78 2-83 35-114 (263)
141 PRK06914 short chain dehydroge 99.2 1.1E-10 2.3E-15 66.5 6.4 81 2-83 33-115 (280)
142 KOG1611|consensus 99.2 1.5E-10 3.2E-15 64.1 6.6 81 2-84 35-120 (249)
143 PRK12936 3-ketoacyl-(acyl-carr 99.2 1.5E-10 3.2E-15 64.6 6.8 76 3-83 37-114 (245)
144 KOG1209|consensus 99.2 1.3E-10 2.8E-15 64.1 6.2 76 2-84 38-116 (289)
145 PRK12745 3-ketoacyl-(acyl-carr 99.2 2.3E-10 4.9E-15 64.3 7.3 75 8-84 39-117 (256)
146 PRK05875 short chain dehydroge 99.2 1.6E-10 3.5E-15 65.6 6.7 82 2-83 37-121 (276)
147 PRK12746 short chain dehydroge 99.2 2E-10 4.4E-15 64.5 7.0 79 3-83 38-124 (254)
148 TIGR02685 pter_reduc_Leis pter 99.2 1.7E-10 3.6E-15 65.4 6.6 79 4-83 34-129 (267)
149 PRK06482 short chain dehydroge 99.2 1.6E-10 3.4E-15 65.7 6.0 61 23-83 48-110 (276)
150 PRK05693 short chain dehydroge 99.1 1.5E-10 3.2E-15 65.8 5.7 59 25-83 46-106 (274)
151 PRK05565 fabG 3-ketoacyl-(acyl 99.1 2.7E-10 5.8E-15 63.5 6.6 79 3-83 37-117 (247)
152 PRK06483 dihydromonapterin red 99.1 2E-10 4.2E-15 64.0 5.9 60 25-84 48-109 (236)
153 PRK07856 short chain dehydroge 99.1 1.4E-10 3.1E-15 65.1 5.3 62 22-83 46-109 (252)
154 COG0623 FabI Enoyl-[acyl-carri 99.1 4.1E-10 8.8E-15 62.5 6.8 74 8-83 43-122 (259)
155 KOG1210|consensus 99.1 1.9E-10 4.1E-15 66.2 5.6 83 2-84 63-147 (331)
156 PRK12827 short chain dehydroge 99.1 5.2E-10 1.1E-14 62.4 7.4 77 5-83 43-121 (249)
157 PRK08703 short chain dehydroge 99.1 2.9E-10 6.2E-15 63.4 6.2 82 2-84 36-123 (239)
158 PRK12826 3-ketoacyl-(acyl-carr 99.1 3.9E-10 8.5E-15 63.0 6.7 80 2-83 36-117 (251)
159 KOG1014|consensus 99.1 1.9E-10 4.1E-15 66.1 5.4 80 1-84 78-163 (312)
160 PRK07201 short chain dehydroge 99.1 2.6E-10 5.6E-15 71.3 6.4 80 2-83 401-484 (657)
161 PRK06463 fabG 3-ketoacyl-(acyl 99.1 1.6E-10 3.4E-15 65.0 4.9 60 24-83 52-113 (255)
162 PRK05993 short chain dehydroge 99.1 2.2E-10 4.9E-15 65.2 5.6 60 24-83 48-110 (277)
163 TIGR01829 AcAcCoA_reduct aceto 99.1 4.9E-10 1.1E-14 62.4 6.8 77 5-83 34-112 (242)
164 PRK08945 putative oxoacyl-(acy 99.1 4.9E-10 1.1E-14 62.8 6.7 81 2-83 42-127 (247)
165 PRK07904 short chain dehydroge 99.1 3.4E-10 7.4E-15 63.9 6.1 80 2-83 39-121 (253)
166 PRK12824 acetoacetyl-CoA reduc 99.1 5E-10 1.1E-14 62.4 6.5 62 22-83 51-114 (245)
167 PF08659 KR: KR domain; Inter 99.1 2E-10 4.4E-15 62.1 4.7 73 8-82 40-114 (181)
168 PRK07326 short chain dehydroge 99.1 7E-10 1.5E-14 61.7 6.8 79 2-83 36-116 (237)
169 KOG1478|consensus 99.1 6.9E-10 1.5E-14 62.7 6.5 84 1-84 37-151 (341)
170 TIGR01963 PHB_DH 3-hydroxybuty 99.1 7.2E-10 1.6E-14 62.1 6.8 80 2-83 31-112 (255)
171 PRK05653 fabG 3-ketoacyl-(acyl 99.1 7.3E-10 1.6E-14 61.7 6.7 80 2-83 35-116 (246)
172 PRK06179 short chain dehydroge 99.1 3.6E-10 7.8E-15 64.0 5.0 60 24-83 46-107 (270)
173 PRK08642 fabG 3-ketoacyl-(acyl 99.1 1.2E-09 2.6E-14 61.2 6.9 61 23-83 52-121 (253)
174 PRK06077 fabG 3-ketoacyl-(acyl 99.1 1.6E-09 3.5E-14 60.7 7.4 74 8-83 43-118 (252)
175 TIGR01830 3oxo_ACP_reduc 3-oxo 99.1 1.1E-09 2.5E-14 60.7 6.7 75 7-83 34-110 (239)
176 PRK06841 short chain dehydroge 99.1 9.8E-10 2.1E-14 61.7 6.4 61 23-83 61-123 (255)
177 KOG1207|consensus 99.0 7.3E-11 1.6E-15 63.4 1.5 74 2-84 37-112 (245)
178 PRK08324 short chain dehydroge 99.0 9.2E-10 2E-14 69.5 6.4 79 2-83 452-532 (681)
179 PRK07074 short chain dehydroge 99.0 1.3E-09 2.9E-14 61.3 6.4 78 2-83 32-111 (257)
180 PRK09135 pteridine reductase; 99.0 2.4E-09 5.2E-14 59.8 7.4 77 6-83 41-119 (249)
181 smart00822 PKS_KR This enzymat 99.0 9.3E-10 2E-14 58.3 5.2 62 22-83 52-115 (180)
182 PRK07041 short chain dehydroge 99.0 1.2E-09 2.5E-14 60.6 5.7 75 2-83 27-103 (230)
183 PRK06057 short chain dehydroge 99.0 2.1E-09 4.6E-14 60.5 6.1 58 26-83 54-115 (255)
184 PRK05557 fabG 3-ketoacyl-(acyl 99.0 3.4E-09 7.3E-14 59.0 6.9 73 9-83 43-117 (248)
185 TIGR02813 omega_3_PfaA polyket 99.0 1.8E-09 3.9E-14 75.3 6.7 68 13-83 2086-2155(2582)
186 COG1028 FabG Dehydrogenases wi 99.0 1.8E-09 3.9E-14 60.5 5.7 60 24-83 58-121 (251)
187 PRK06523 short chain dehydroge 99.0 1.4E-09 3E-14 61.3 5.1 60 24-83 50-113 (260)
188 PRK06171 sorbitol-6-phosphate 99.0 1.9E-09 4.2E-14 60.9 5.5 61 24-84 50-121 (266)
189 PRK12825 fabG 3-ketoacyl-(acyl 99.0 4.9E-09 1.1E-13 58.4 6.7 74 8-83 43-118 (249)
190 PRK12829 short chain dehydroge 99.0 4.8E-09 1E-13 59.1 6.6 78 2-83 41-121 (264)
191 PRK07102 short chain dehydroge 99.0 5.1E-09 1.1E-13 58.5 6.6 78 2-83 31-110 (243)
192 PRK08220 2,3-dihydroxybenzoate 98.9 2.6E-09 5.7E-14 59.8 5.4 61 23-83 48-110 (252)
193 PRK12828 short chain dehydroge 98.9 8.2E-09 1.8E-13 57.3 6.5 78 2-83 37-116 (239)
194 PRK06300 enoyl-(acyl carrier p 98.9 2.6E-09 5.6E-14 61.8 3.7 49 36-84 104-156 (299)
195 PRK05884 short chain dehydroge 98.8 1.2E-08 2.7E-13 56.6 4.5 72 2-84 30-109 (223)
196 PRK08261 fabG 3-ketoacyl-(acyl 98.8 1.3E-08 2.8E-13 61.6 4.8 58 26-83 259-318 (450)
197 PRK09291 short chain dehydroge 98.8 2.8E-08 6E-13 55.9 5.7 73 3-83 33-107 (257)
198 PRK06924 short chain dehydroge 98.8 3.6E-08 7.7E-13 55.3 6.0 62 22-83 47-115 (251)
199 PRK06101 short chain dehydroge 98.8 2.2E-08 4.9E-13 56.0 5.0 73 2-83 31-105 (240)
200 PRK05786 fabG 3-ketoacyl-(acyl 98.7 6.8E-08 1.5E-12 53.8 6.3 79 2-83 35-113 (238)
201 PRK07806 short chain dehydroge 98.7 7E-08 1.5E-12 54.0 6.0 75 3-83 37-112 (248)
202 PRK08177 short chain dehydroge 98.7 6.4E-08 1.4E-12 53.7 5.4 58 24-83 46-107 (225)
203 PRK09009 C factor cell-cell si 98.7 5.1E-08 1.1E-12 54.3 4.4 57 23-83 43-107 (235)
204 TIGR02114 coaB_strep phosphopa 98.6 2.3E-07 4.9E-12 52.0 6.7 53 29-81 58-112 (227)
205 PRK07578 short chain dehydroge 98.6 3.5E-08 7.5E-13 53.8 3.2 53 27-83 35-89 (199)
206 PRK07023 short chain dehydroge 98.6 1.3E-07 2.8E-12 52.9 5.5 62 22-83 44-112 (243)
207 PRK12742 oxidoreductase; Provi 98.6 1.6E-07 3.5E-12 52.2 5.8 55 25-83 53-109 (237)
208 PRK07577 short chain dehydroge 98.6 3.7E-07 8.1E-12 50.7 6.6 57 26-83 44-102 (234)
209 PRK06953 short chain dehydroge 98.6 1.9E-07 4.2E-12 51.7 5.3 57 25-83 46-106 (222)
210 PRK07060 short chain dehydroge 98.6 2E-07 4.4E-12 52.0 5.4 55 25-83 55-111 (245)
211 PRK13656 trans-2-enoyl-CoA red 98.6 5.2E-07 1.1E-11 54.0 7.0 42 22-63 102-143 (398)
212 PRK08017 oxidoreductase; Provi 98.6 2.3E-07 4.9E-12 52.2 5.2 59 25-83 47-108 (256)
213 PRK08264 short chain dehydroge 98.5 3.8E-07 8.1E-12 50.8 5.0 58 22-83 48-108 (238)
214 PRK06550 fabG 3-ketoacyl-(acyl 98.4 2.9E-07 6.2E-12 51.2 3.3 54 24-83 46-102 (235)
215 PRK12367 short chain dehydroge 98.4 4.8E-07 1E-11 51.1 3.9 51 26-84 61-111 (245)
216 KOG1204|consensus 98.4 3.5E-07 7.6E-12 51.1 3.1 57 28-84 59-120 (253)
217 PRK07424 bifunctional sterol d 98.4 9.4E-07 2E-11 53.3 5.1 53 24-84 225-277 (406)
218 PRK12428 3-alpha-hydroxysteroi 98.3 5.2E-07 1.1E-11 50.7 2.9 48 27-83 27-74 (241)
219 PRK08219 short chain dehydroge 98.3 1.8E-06 3.9E-11 47.7 4.6 56 24-83 48-105 (227)
220 PLN02989 cinnamyl-alcohol dehy 97.8 4.6E-05 1E-09 44.5 4.2 52 23-83 56-107 (325)
221 PRK08309 short chain dehydroge 97.7 0.00038 8.2E-09 37.8 6.1 56 2-60 29-84 (177)
222 COG1086 Predicted nucleoside-d 97.6 0.00023 5.1E-09 44.7 4.8 75 2-84 281-356 (588)
223 TIGR03589 PseB UDP-N-acetylglu 97.5 0.00032 7E-09 41.2 4.5 51 23-83 53-104 (324)
224 TIGR02622 CDP_4_6_dhtase CDP-g 97.3 0.00047 1E-08 40.8 4.1 53 24-83 53-105 (349)
225 PF02719 Polysacc_synt_2: Poly 97.3 5.4E-05 1.2E-09 44.1 0.2 74 2-83 29-107 (293)
226 KOG2733|consensus 97.3 0.0012 2.6E-08 39.7 5.3 55 1-62 38-94 (423)
227 PRK10217 dTDP-glucose 4,6-dehy 97.3 0.00054 1.2E-08 40.5 3.8 53 24-83 52-104 (355)
228 PLN02572 UDP-sulfoquinovose sy 97.2 0.00043 9.2E-09 42.5 3.3 55 24-83 114-169 (442)
229 PLN03209 translocon at the inn 97.2 0.00084 1.8E-08 42.5 4.5 55 2-63 110-171 (576)
230 PRK06732 phosphopantothenate-- 97.1 0.003 6.4E-08 35.7 5.6 45 38-82 68-114 (229)
231 PRK10084 dTDP-glucose 4,6 dehy 97.1 0.0013 2.8E-08 38.9 4.2 53 24-83 51-103 (352)
232 COG1091 RfbD dTDP-4-dehydrorha 96.9 0.0026 5.6E-08 37.1 4.3 48 29-83 33-80 (281)
233 PLN02653 GDP-mannose 4,6-dehyd 96.9 0.0018 4E-08 38.1 3.5 36 23-63 60-95 (340)
234 PLN02986 cinnamyl-alcohol dehy 96.8 0.003 6.6E-08 36.9 4.0 33 23-62 56-88 (322)
235 TIGR01181 dTDP_gluc_dehyt dTDP 96.5 0.0031 6.8E-08 36.4 3.0 35 24-63 51-85 (317)
236 TIGR01472 gmd GDP-mannose 4,6- 96.5 0.0047 1E-07 36.5 3.4 35 24-63 56-90 (343)
237 PLN02240 UDP-glucose 4-epimera 96.4 0.0049 1.1E-07 36.4 3.3 53 23-82 58-110 (352)
238 PLN02896 cinnamyl-alcohol dehy 96.4 0.018 3.8E-07 34.3 5.5 34 23-63 58-91 (353)
239 TIGR01179 galE UDP-glucose-4-e 96.4 0.0066 1.4E-07 35.2 3.6 35 24-63 48-82 (328)
240 PLN02650 dihydroflavonol-4-red 96.2 0.016 3.5E-07 34.4 4.5 32 24-62 57-88 (351)
241 PF04321 RmlD_sub_bind: RmlD s 96.0 0.0064 1.4E-07 35.4 2.4 48 9-63 13-63 (286)
242 PLN02778 3,5-epimerase/4-reduc 96.0 0.026 5.6E-07 33.0 4.9 67 10-83 23-90 (298)
243 PRK10675 UDP-galactose-4-epime 96.0 0.019 4.1E-07 33.8 4.4 35 24-63 51-85 (338)
244 PLN02260 probable rhamnose bio 96.0 0.027 5.9E-07 36.4 5.2 67 10-83 394-461 (668)
245 PF01073 3Beta_HSD: 3-beta hyd 96.0 0.012 2.6E-07 34.2 3.3 47 27-83 49-95 (280)
246 PF03435 Saccharop_dh: Sacchar 95.8 0.029 6.4E-07 33.9 4.6 50 2-62 29-78 (386)
247 PRK05579 bifunctional phosphop 95.7 0.1 2.2E-06 32.1 6.5 32 29-63 248-279 (399)
248 PLN02662 cinnamyl-alcohol dehy 95.5 0.03 6.5E-07 32.7 3.8 33 24-63 56-88 (322)
249 PLN02214 cinnamoyl-CoA reducta 95.5 0.019 4.2E-07 34.1 3.0 32 24-62 61-92 (342)
250 PLN00198 anthocyanidin reducta 95.3 0.031 6.7E-07 33.0 3.4 32 24-62 60-91 (338)
251 PRK12548 shikimate 5-dehydroge 94.6 0.084 1.8E-06 31.0 3.9 51 2-61 156-209 (289)
252 PF12241 Enoyl_reductase: Tran 94.2 0.34 7.4E-06 27.7 5.4 41 22-62 22-62 (237)
253 PF03808 Glyco_tran_WecB: Glyc 94.1 0.48 1E-05 25.7 6.2 58 3-62 55-112 (172)
254 PF01370 Epimerase: NAD depend 94.0 0.077 1.7E-06 29.4 2.8 35 24-63 43-77 (236)
255 COG1748 LYS9 Saccharopine dehy 93.7 0.16 3.5E-06 31.2 3.9 50 1-62 30-79 (389)
256 TIGR00521 coaBC_dfp phosphopan 93.5 0.72 1.6E-05 28.5 6.4 32 29-63 245-277 (390)
257 TIGR01214 rmlD dTDP-4-dehydror 93.3 0.42 9.2E-06 27.5 5.1 48 9-63 12-62 (287)
258 TIGR02197 heptose_epim ADP-L-g 93.2 0.13 2.8E-06 29.9 2.9 48 28-82 46-93 (314)
259 TIGR00696 wecB_tagA_cpsF bacte 92.8 0.91 2E-05 24.9 6.4 58 2-62 54-111 (177)
260 COG1088 RfbB dTDP-D-glucose 4, 92.6 0.44 9.6E-06 28.6 4.4 37 22-63 50-86 (340)
261 TIGR03466 HpnA hopanoid-associ 92.5 0.22 4.9E-06 29.0 3.3 32 24-62 44-75 (328)
262 PLN02657 3,8-divinyl protochlo 92.4 0.39 8.5E-06 29.4 4.3 36 24-62 112-147 (390)
263 PRK15181 Vi polysaccharide bio 92.3 0.22 4.8E-06 29.7 3.1 33 24-63 70-102 (348)
264 PLN02583 cinnamoyl-CoA reducta 92.2 0.46 1E-05 27.8 4.3 50 23-83 57-106 (297)
265 cd06533 Glyco_transf_WecG_TagA 92.2 1.1 2.3E-05 24.3 6.5 57 3-62 53-110 (171)
266 PRK09987 dTDP-4-dehydrorhamnos 91.5 0.17 3.7E-06 29.6 2.0 30 29-63 37-66 (299)
267 COG1570 XseA Exonuclease VII, 91.4 1.9 4.1E-05 27.2 6.3 63 1-63 141-205 (440)
268 PLN02725 GDP-4-keto-6-deoxyman 90.6 0.26 5.6E-06 28.6 2.2 30 29-63 32-61 (306)
269 PF07993 NAD_binding_4: Male s 90.5 0.1 2.2E-06 29.7 0.4 39 22-63 59-99 (249)
270 PF13460 NAD_binding_10: NADH( 90.5 1.3 2.9E-05 23.6 4.8 31 24-61 40-70 (183)
271 PLN02260 probable rhamnose bio 90.1 0.51 1.1E-05 30.8 3.4 35 24-63 58-92 (668)
272 COG3268 Uncharacterized conser 88.2 0.88 1.9E-05 27.8 3.1 48 1-62 35-82 (382)
273 KOG1371|consensus 87.8 2.4 5.3E-05 25.8 4.8 37 22-63 53-89 (343)
274 PLN02427 UDP-apiose/xylose syn 87.8 1.2 2.6E-05 27.0 3.7 33 24-63 66-98 (386)
275 PLN02996 fatty acyl-CoA reduct 87.5 0.97 2.1E-05 28.7 3.2 34 23-63 84-124 (491)
276 KOG1502|consensus 86.6 1.5 3.3E-05 26.5 3.5 52 3-63 37-90 (327)
277 COG1087 GalE UDP-glucose 4-epi 86.3 1.3 2.8E-05 26.7 3.1 34 25-63 46-79 (329)
278 KOG3191|consensus 85.6 4.7 0.0001 22.7 5.0 14 50-63 109-122 (209)
279 PLN02503 fatty acyl-CoA reduct 84.4 1.8 3.8E-05 28.4 3.3 52 23-82 192-245 (605)
280 PRK11908 NAD-dependent epimera 84.3 1.4 3E-05 26.3 2.7 33 24-63 47-80 (347)
281 PF08883 DOPA_dioxygen: Dopa 4 83.9 4.1 8.8E-05 20.5 6.4 33 26-59 46-78 (104)
282 PF04127 DFP: DNA / pantothena 83.3 5.9 0.00013 22.0 5.4 52 10-63 33-94 (185)
283 KOG2336|consensus 82.5 7.9 0.00017 23.4 5.1 53 8-60 136-192 (422)
284 cd01078 NAD_bind_H4MPT_DH NADP 81.8 6.6 0.00014 21.5 5.4 50 2-61 58-107 (194)
285 PRK11150 rfaD ADP-L-glycero-D- 81.6 2 4.2E-05 25.1 2.6 34 30-63 45-80 (308)
286 TIGR00237 xseA exodeoxyribonuc 80.7 12 0.00026 23.7 6.7 62 2-63 136-199 (432)
287 PF02601 Exonuc_VII_L: Exonucl 80.0 10 0.00023 22.6 7.4 62 2-63 21-87 (319)
288 TIGR01777 yfcH conserved hypot 79.5 2.1 4.6E-05 24.6 2.3 16 48-63 54-69 (292)
289 COG0451 WcaG Nucleoside-diphos 79.5 1.4 2.9E-05 25.6 1.5 32 26-63 45-76 (314)
290 PRK05865 hypothetical protein; 79.3 4.8 0.0001 27.7 4.0 33 24-63 41-73 (854)
291 PLN02686 cinnamoyl-CoA reducta 78.9 4 8.7E-05 24.8 3.4 31 24-61 108-138 (367)
292 PF01729 QRPTase_C: Quinolinat 78.8 8.6 0.00019 21.0 4.4 36 24-61 100-135 (169)
293 PF01220 DHquinase_II: Dehydro 78.5 8.2 0.00018 20.6 5.5 49 9-62 27-77 (140)
294 CHL00194 ycf39 Ycf39; Provisio 78.3 6.3 0.00014 23.3 4.0 31 24-61 44-74 (317)
295 PLN00141 Tic62-NAD(P)-related 78.0 6.8 0.00015 22.3 4.0 34 24-62 63-96 (251)
296 KOG1431|consensus 78.0 2.6 5.6E-05 24.6 2.2 47 29-80 38-87 (315)
297 PRK00286 xseA exodeoxyribonucl 76.8 16 0.00034 23.0 6.6 62 2-63 142-204 (438)
298 PRK08125 bifunctional UDP-gluc 76.7 3.4 7.4E-05 27.2 2.8 33 24-63 361-394 (660)
299 TIGR01746 Thioester-redct thio 76.5 4.4 9.5E-05 24.0 3.0 38 23-63 61-100 (367)
300 PRK05395 3-dehydroquinate dehy 76.5 9.8 0.00021 20.4 6.2 50 8-62 27-78 (146)
301 PF06956 RtcR: Regulator of RN 75.9 11 0.00025 20.9 4.8 53 6-58 52-111 (183)
302 cd00466 DHQase_II Dehydroquina 74.5 11 0.00024 20.1 6.1 49 8-61 25-75 (140)
303 PRK13015 3-dehydroquinate dehy 73.7 12 0.00026 20.1 6.0 49 8-61 27-77 (146)
304 PRK03692 putative UDP-N-acetyl 71.9 17 0.00037 21.2 6.5 56 3-61 112-167 (243)
305 TIGR01088 aroQ 3-dehydroquinat 71.8 13 0.00029 19.8 6.2 49 8-61 25-75 (141)
306 KOG3923|consensus 71.4 10 0.00022 23.1 3.6 14 50-63 182-195 (342)
307 COG1058 CinA Predicted nucleot 71.3 19 0.0004 21.3 7.2 65 10-79 24-88 (255)
308 KOG1430|consensus 69.6 7.8 0.00017 24.0 3.0 52 22-83 54-105 (361)
309 COG1922 WecG Teichoic acid bio 69.0 21 0.00046 21.0 6.2 57 3-62 115-172 (253)
310 KOG0092|consensus 68.8 19 0.00041 20.4 4.9 40 22-61 77-118 (200)
311 PF08643 DUF1776: Fungal famil 68.6 6.6 0.00014 23.6 2.5 59 24-82 51-126 (299)
312 COG0757 AroQ 3-dehydroquinate 68.3 9.4 0.0002 20.4 2.7 49 9-62 27-78 (146)
313 PF01488 Shikimate_DH: Shikima 67.5 11 0.00023 19.6 2.9 14 50-63 74-87 (135)
314 KOG1221|consensus 66.8 5.6 0.00012 25.5 2.0 40 23-63 79-118 (467)
315 cd00458 SugarP_isomerase Sugar 62.0 13 0.00029 20.1 2.7 38 23-60 86-123 (169)
316 PF09419 PGP_phosphatase: Mito 61.3 18 0.00039 19.9 3.1 27 36-62 62-90 (168)
317 COG3959 Transketolase, N-termi 59.8 14 0.00031 21.5 2.6 36 24-59 205-240 (243)
318 KOG2672|consensus 59.4 25 0.00055 21.3 3.6 66 7-77 175-243 (360)
319 COG0281 SfcA Malic enzyme [Ene 59.2 42 0.0009 21.5 4.7 36 19-54 112-147 (432)
320 COG2453 CDC14 Predicted protei 57.7 25 0.00054 19.3 3.4 34 30-63 81-117 (180)
321 PF02515 CoA_transf_3: CoA-tra 56.9 32 0.0007 19.0 4.0 11 30-40 3-13 (191)
322 COG0521 MoaB Molybdopterin bio 56.7 33 0.00071 19.0 7.1 66 8-78 28-94 (169)
323 PF00899 ThiF: ThiF family; I 56.6 26 0.00057 17.9 5.5 47 7-61 56-102 (135)
324 COG1448 TyrB Aspartate/tyrosin 56.0 34 0.00073 21.6 3.9 44 36-79 157-200 (396)
325 COG3007 Uncharacterized paraqu 55.9 46 0.001 20.5 5.7 41 22-62 102-142 (398)
326 PRK13982 bifunctional SbtC-lik 55.6 55 0.0012 21.3 5.2 51 10-63 286-346 (475)
327 TIGR00177 molyb_syn molybdenum 54.5 31 0.00067 18.1 7.3 61 12-77 32-92 (144)
328 PF14195 DUF4316: Domain of un 54.1 12 0.00027 17.4 1.5 14 45-58 12-25 (70)
329 PF13348 Y_phosphatase3C: Tyro 53.7 16 0.00035 16.4 1.9 24 33-56 26-49 (68)
330 PLN02695 GDP-D-mannose-3',5'-e 53.2 30 0.00064 21.2 3.4 30 26-62 67-96 (370)
331 PRK08618 ornithine cyclodeamin 52.4 51 0.0011 20.0 4.6 18 2-19 158-175 (325)
332 COG1512 Beta-propeller domains 51.6 51 0.0011 19.7 4.6 43 6-49 48-90 (271)
333 COG1908 FrhD Coenzyme F420-red 50.3 37 0.00081 17.8 3.4 25 22-46 94-118 (132)
334 PRK12549 shikimate 5-dehydroge 49.9 53 0.0012 19.5 4.0 18 2-19 157-174 (284)
335 PF07005 DUF1537: Protein of u 49.8 46 0.001 18.7 4.5 36 25-61 33-68 (223)
336 PF13684 Dak1_2: Dihydroxyacet 49.5 58 0.0013 19.8 6.3 52 10-63 253-305 (313)
337 PRK08385 nicotinate-nucleotide 49.4 57 0.0012 19.6 5.0 37 25-61 203-239 (278)
338 PRK15408 autoinducer 2-binding 48.8 60 0.0013 19.7 6.6 48 11-58 169-216 (336)
339 cd00950 DHDPS Dihydrodipicolin 48.7 55 0.0012 19.2 4.2 12 36-47 53-64 (284)
340 cd01486 Apg7 Apg7 is an E1-lik 48.4 62 0.0014 19.8 4.4 24 7-30 55-78 (307)
341 PRK11188 rrmJ 23S rRNA methylt 48.1 49 0.0011 18.6 3.6 34 25-60 93-126 (209)
342 COG0293 FtsJ 23S rRNA methylas 47.5 42 0.00091 19.2 3.2 36 23-60 85-120 (205)
343 cd00885 cinA Competence-damage 47.3 48 0.001 18.1 8.0 64 11-79 23-86 (170)
344 PRK06407 ornithine cyclodeamin 47.0 63 0.0014 19.5 4.6 18 2-19 148-165 (301)
345 PRK05580 primosome assembly pr 46.8 91 0.002 21.2 6.4 52 8-61 438-490 (679)
346 cd01483 E1_enzyme_family Super 46.0 43 0.00094 17.3 5.5 47 7-61 53-99 (143)
347 COG1089 Gmd GDP-D-mannose dehy 45.8 33 0.00072 21.0 2.7 36 22-62 54-89 (345)
348 KOG4589|consensus 45.7 29 0.00063 19.9 2.4 33 24-58 110-143 (232)
349 PF00994 MoCF_biosynth: Probab 45.6 45 0.00097 17.4 7.1 63 10-77 20-82 (144)
350 KOG2892|consensus 45.5 69 0.0015 19.5 5.3 51 10-60 23-85 (320)
351 TIGR02992 ectoine_eutC ectoine 45.4 52 0.0011 19.9 3.6 18 2-19 160-177 (326)
352 PRK05458 guanosine 5'-monophos 45.0 73 0.0016 19.6 6.1 31 26-56 113-145 (326)
353 PF06962 rRNA_methylase: Putat 44.2 23 0.00049 18.9 1.8 52 4-63 7-58 (140)
354 PRK03673 hypothetical protein; 44.0 45 0.00098 21.1 3.2 58 12-74 26-83 (396)
355 KOG2865|consensus 43.3 32 0.0007 21.2 2.4 32 23-61 109-140 (391)
356 COG3727 Vsr DNA G:T-mismatch r 42.7 55 0.0012 17.5 4.4 43 3-47 91-134 (150)
357 PF03753 HHV6-IE: Human herpes 42.3 2.8 6E-05 27.8 -2.0 32 52-83 44-79 (993)
358 PF03461 TRCF: TRCF domain; I 42.2 33 0.00071 17.0 2.1 19 33-51 30-48 (101)
359 PF13649 Methyltransf_25: Meth 42.0 42 0.00092 16.0 4.4 44 5-60 33-76 (101)
360 TIGR00595 priA primosomal prot 41.8 99 0.0021 20.2 6.4 51 9-61 271-322 (505)
361 TIGR03649 ergot_EASG ergot alk 41.7 30 0.00064 20.1 2.2 36 25-61 41-77 (285)
362 COG0373 HemA Glutamyl-tRNA red 41.5 95 0.0021 19.9 4.7 15 49-63 236-250 (414)
363 cd00757 ThiF_MoeB_HesA_family 41.3 69 0.0015 18.3 5.5 26 7-32 75-100 (228)
364 TIGR03599 YloV DAK2 domain fus 41.3 1.1E+02 0.0023 20.4 6.4 40 24-63 483-522 (530)
365 COG4359 Uncharacterized conser 40.4 48 0.001 19.0 2.7 30 31-62 71-100 (220)
366 PF02875 Mur_ligase_C: Mur lig 39.7 45 0.00098 15.7 6.7 47 3-49 21-71 (91)
367 PRK01215 competence damage-ind 39.6 82 0.0018 18.7 7.0 62 11-77 27-88 (264)
368 PRK06843 inosine 5-monophospha 39.0 1E+02 0.0023 19.7 5.6 32 25-56 166-199 (404)
369 PRK06382 threonine dehydratase 38.9 96 0.0021 19.5 4.1 25 39-63 161-185 (406)
370 COG3805 DodA Aromatic ring-cle 38.2 58 0.0013 16.6 3.3 31 28-59 56-86 (120)
371 COG0009 SUA5 Putative translat 38.1 81 0.0017 18.1 3.5 37 8-44 15-55 (211)
372 PF07315 DUF1462: Protein of u 38.0 55 0.0012 16.2 5.2 41 7-47 20-63 (93)
373 PRK14478 nitrogenase molybdenu 38.0 1.1E+02 0.0024 19.8 5.8 58 5-63 103-163 (475)
374 CHL00073 chlN photochlorophyll 37.9 1.1E+02 0.0025 19.8 5.7 56 5-62 81-140 (457)
375 cd02013 TPP_Xsc_like Thiamine 37.6 75 0.0016 17.6 3.4 42 21-62 70-111 (196)
376 PRK11630 hypothetical protein; 37.4 45 0.00097 18.9 2.4 35 9-43 17-55 (206)
377 COG3320 Putative dehydrogenase 37.4 62 0.0013 20.5 3.1 39 22-63 59-99 (382)
378 cd01977 Nitrogenase_VFe_alpha 37.4 1.1E+02 0.0023 19.3 6.1 57 6-63 72-133 (415)
379 PRK10634 tRNA(ANN) t(6)A37 thr 37.3 49 0.0011 18.4 2.5 19 25-43 30-48 (190)
380 PF04536 TPM: TLP18.3, Psb32 a 37.2 56 0.0012 16.1 4.3 43 6-49 7-49 (119)
381 COG2894 MinD Septum formation 37.1 81 0.0018 18.7 3.3 26 31-58 95-120 (272)
382 PTZ00285 glucosamine-6-phospha 37.0 87 0.0019 18.2 3.6 41 22-63 101-142 (253)
383 cd02990 UAS_FAF1 UAS family, F 36.9 69 0.0015 17.0 3.9 23 23-45 55-77 (136)
384 PLN00165 hypothetical protein; 36.1 13 0.00029 18.2 0.2 17 68-84 71-87 (88)
385 PF02662 FlpD: Methyl-viologen 36.0 67 0.0015 16.6 2.9 27 22-48 93-119 (124)
386 KOG1202|consensus 35.9 53 0.0012 24.8 2.9 67 14-83 1814-1882(2376)
387 PLN02819 lysine-ketoglutarate 35.8 1.5E+02 0.0032 21.7 4.8 31 24-61 628-658 (1042)
388 COG1198 PriA Primosomal protei 35.7 1.5E+02 0.0033 20.7 5.2 49 9-59 493-542 (730)
389 cd00758 MoCF_BD MoCF_BD: molyb 35.7 68 0.0015 16.5 7.1 61 12-77 24-84 (133)
390 COG4650 RtcR Sigma54-dependent 35.5 1.1E+02 0.0025 19.1 5.2 56 4-59 51-113 (531)
391 TIGR00502 nagB glucosamine-6-p 35.3 69 0.0015 18.7 3.0 40 24-63 103-142 (259)
392 PLN02970 serine racemase 35.3 1.1E+02 0.0023 18.7 4.5 27 37-63 161-187 (328)
393 KOG0088|consensus 35.1 85 0.0018 17.5 3.4 26 22-47 85-110 (218)
394 COG0282 ackA Acetate kinase [E 34.8 82 0.0018 20.1 3.3 16 48-63 316-331 (396)
395 cd01065 NAD_bind_Shikimate_DH 34.8 71 0.0015 16.5 3.4 13 50-62 80-92 (155)
396 TIGR01884 cas_HTH CRISPR locus 34.7 87 0.0019 17.5 6.8 38 23-61 59-97 (203)
397 PRK06823 ornithine cyclodeamin 34.6 1.1E+02 0.0024 18.6 4.1 17 2-18 159-175 (315)
398 COG0169 AroE Shikimate 5-dehyd 34.2 56 0.0012 19.6 2.5 12 51-62 190-201 (283)
399 PF13727 CoA_binding_3: CoA-bi 34.0 75 0.0016 16.6 3.7 25 24-48 143-167 (175)
400 COG1548 Predicted transcriptio 33.8 1.1E+02 0.0025 18.6 4.5 59 5-63 37-101 (330)
401 PLN02206 UDP-glucuronate decar 33.8 28 0.00061 22.1 1.3 13 51-63 183-195 (442)
402 COG5583 Uncharacterized small 33.7 51 0.0011 14.5 2.9 28 35-62 8-36 (54)
403 COG0421 SpeE Spermidine syntha 33.4 1.1E+02 0.0024 18.4 3.8 38 24-61 149-192 (282)
404 TIGR01284 alt_nitrog_alph nitr 33.4 1.4E+02 0.0029 19.3 6.0 57 6-63 109-170 (457)
405 cd01678 PFL1 Pyruvate formate 33.2 1.2E+02 0.0026 21.1 4.1 66 8-77 668-733 (738)
406 cd01484 E1-2_like Ubiquitin ac 33.1 1E+02 0.0022 17.9 5.1 28 7-34 53-80 (234)
407 cd04910 ACT_AK-Ectoine_1 ACT d 33.1 60 0.0013 15.1 2.2 18 7-24 51-68 (71)
408 PRK07334 threonine dehydratase 32.9 1.1E+02 0.0025 19.2 3.8 27 37-63 157-183 (403)
409 PF09547 Spore_IV_A: Stage IV 32.6 1.5E+02 0.0032 19.5 4.9 40 9-49 197-236 (492)
410 PRK14484 phosphotransferase ma 32.3 81 0.0018 16.5 2.7 42 3-46 8-49 (124)
411 PF02775 TPP_enzyme_C: Thiamin 31.5 71 0.0015 16.7 2.5 42 20-61 44-85 (153)
412 KOG1252|consensus 31.2 74 0.0016 20.0 2.7 15 49-63 210-224 (362)
413 PF14566 PTPlike_phytase: Inos 31.2 89 0.0019 16.6 3.1 27 34-60 107-133 (149)
414 cd03376 TPP_PFOR_porB_like Thi 30.5 1.1E+02 0.0025 17.6 3.5 32 29-60 170-203 (235)
415 PRK03670 competence damage-ind 30.3 1.2E+02 0.0026 17.9 7.9 64 11-79 24-88 (252)
416 KOG0799|consensus 30.2 1.6E+02 0.0034 19.1 5.0 46 10-55 116-161 (439)
417 TIGR03642 cas_csx13 CRISPR-ass 30.2 91 0.002 16.3 5.5 37 12-48 41-80 (124)
418 PRK09417 mogA molybdenum cofac 30.2 1.1E+02 0.0024 17.3 5.7 42 37-78 50-93 (193)
419 TIGR02667 moaB_proteo molybden 29.7 1E+02 0.0022 16.7 7.7 62 12-76 27-88 (163)
420 PRK11634 ATP-dependent RNA hel 29.6 1.8E+02 0.004 19.7 5.3 52 3-59 252-303 (629)
421 PF12609 DUF3774: Wound-induce 29.5 18 0.00039 17.3 -0.0 18 67-84 62-79 (79)
422 COG4982 3-oxoacyl-[acyl-carrie 29.5 2E+02 0.0044 20.1 5.0 39 10-48 436-476 (866)
423 TIGR01127 ilvA_1Cterm threonin 29.4 1.4E+02 0.0031 18.4 4.0 25 39-63 136-160 (380)
424 PF10384 Scm3: Centromere prot 29.3 60 0.0013 14.5 1.7 17 36-52 12-28 (58)
425 PF02084 Bindin: Bindin; Inte 29.2 1.3E+02 0.0028 17.7 3.6 36 12-48 105-140 (238)
426 cd01677 PFL2_DhaB_BssA Pyruvat 29.1 1.2E+02 0.0027 21.2 3.7 65 9-77 713-777 (781)
427 cd01485 E1-1_like Ubiquitin ac 28.6 1.2E+02 0.0025 17.0 5.1 27 7-33 75-101 (198)
428 PLN02274 inosine-5'-monophosph 28.5 1.8E+02 0.0039 19.2 4.8 30 25-54 261-292 (505)
429 KOG0025|consensus 28.4 1.4E+02 0.0031 18.5 3.5 52 3-61 192-243 (354)
430 PRK05752 uroporphyrinogen-III 28.4 1.1E+02 0.0024 17.7 3.1 18 2-19 8-25 (255)
431 PRK03525 crotonobetainyl-CoA:c 28.4 1.6E+02 0.0035 18.7 4.2 31 25-59 66-96 (405)
432 PF15513 DUF4651: Domain of un 28.3 72 0.0016 14.6 3.0 22 38-59 7-28 (62)
433 cd02004 TPP_BZL_OCoD_HPCL Thia 28.0 1.1E+02 0.0023 16.5 3.5 41 21-61 65-105 (172)
434 PRK10689 transcription-repair 27.9 2.6E+02 0.0056 20.8 6.3 52 5-59 818-869 (1147)
435 PF08303 tRNA_lig_kinase: tRNA 27.8 1.2E+02 0.0026 16.9 4.2 10 71-80 157-166 (168)
436 PRK07877 hypothetical protein; 27.8 2.2E+02 0.0047 19.9 5.9 45 7-59 160-204 (722)
437 PF10727 Rossmann-like: Rossma 27.7 1E+02 0.0022 16.1 2.6 28 36-63 79-108 (127)
438 TIGR03438 probable methyltrans 27.4 1.5E+02 0.0032 17.8 4.0 29 6-34 98-126 (301)
439 KOG1412|consensus 27.3 1.6E+02 0.0035 18.6 3.6 41 37-78 164-205 (410)
440 PRK07048 serine/threonine dehy 27.3 1.3E+02 0.0029 18.1 3.3 23 41-63 162-184 (321)
441 PRK08291 ectoine utilization p 27.3 1.5E+02 0.0033 18.0 4.7 18 2-19 163-180 (330)
442 cd02006 TPP_Gcl Thiamine pyrop 27.2 1.2E+02 0.0026 16.8 3.4 41 21-61 74-114 (202)
443 PF06569 DUF1128: Protein of u 27.2 48 0.001 15.6 1.2 13 36-48 7-19 (71)
444 PF01113 DapB_N: Dihydrodipico 27.1 98 0.0021 15.8 4.2 32 28-61 70-101 (124)
445 KOG1099|consensus 26.7 1.4E+02 0.003 17.9 3.1 34 23-61 89-124 (294)
446 PRK07058 acetate kinase; Provi 26.4 1.3E+02 0.0028 19.3 3.2 14 49-62 316-329 (396)
447 TIGR01255 pyr_form_ly_1 format 26.2 2.2E+02 0.0047 20.1 4.3 66 8-77 666-736 (744)
448 PRK11127 autonomous glycyl rad 26.1 1.1E+02 0.0024 16.1 3.3 50 25-77 70-119 (127)
449 TIGR00057 Sua5/YciO/YrdC/YwlC 26.1 75 0.0016 17.8 2.1 19 25-43 31-49 (201)
450 COG0275 Predicted S-adenosylme 25.9 1.7E+02 0.0037 18.1 4.5 54 3-63 55-108 (314)
451 COG0514 RecQ Superfamily II DN 25.8 2.2E+02 0.0048 19.4 5.1 53 3-60 237-289 (590)
452 cd03522 MoeA_like MoeA_like. T 25.8 1.7E+02 0.0036 18.0 6.6 60 12-75 184-243 (312)
453 PRK09983 pflD putative formate 25.7 1.6E+02 0.0034 20.7 3.7 65 9-77 694-758 (765)
454 PRK08611 pyruvate oxidase; Pro 25.6 2E+02 0.0043 19.1 4.1 42 21-62 425-466 (576)
455 PF07845 DUF1636: Protein of u 25.5 1E+02 0.0022 15.9 2.3 34 23-56 64-97 (116)
456 PRK08811 uroporphyrinogen-III 25.3 1.6E+02 0.0034 17.4 4.0 25 2-28 23-47 (266)
457 PF10055 DUF2292: Uncharacteri 25.3 65 0.0014 13.1 2.2 22 40-61 5-27 (38)
458 cd06403 PB1_Par6 The PB1 domai 25.1 96 0.0021 15.0 3.4 40 22-61 8-49 (80)
459 PRK05074 inosine/xanthosine tr 25.0 1.4E+02 0.003 16.7 3.8 46 2-47 8-62 (173)
460 cd06399 PB1_P40 The PB1 domain 24.9 1E+02 0.0022 15.2 2.8 34 26-59 18-51 (92)
461 PF01205 UPF0029: Uncharacteri 24.7 1.1E+02 0.0024 15.6 4.2 29 23-51 4-32 (110)
462 COG3961 Pyruvate decarboxylase 24.7 2.3E+02 0.0049 19.1 4.2 41 22-62 429-469 (557)
463 PF05368 NmrA: NmrA-like famil 24.7 1.4E+02 0.003 16.7 4.7 30 25-61 45-74 (233)
464 cd02014 TPP_POX Thiamine pyrop 24.6 1.3E+02 0.0028 16.3 4.0 40 22-61 69-108 (178)
465 PF02514 CobN-Mg_chel: CobN/Ma 24.6 3E+02 0.0064 20.4 6.0 55 4-62 86-142 (1098)
466 KOG1411|consensus 24.5 1.5E+02 0.0033 18.9 3.2 43 37-79 184-226 (427)
467 cd01336 MDH_cytoplasmic_cytoso 24.3 1E+02 0.0022 18.9 2.5 17 47-63 74-90 (325)
468 TIGR02025 BchH magnesium chela 24.3 3.2E+02 0.0068 20.6 5.7 56 5-62 255-311 (1216)
469 PRK03170 dihydrodipicolinate s 24.1 1.7E+02 0.0036 17.4 4.3 12 36-47 54-65 (292)
470 PF00479 G6PD_N: Glucose-6-pho 24.1 1.4E+02 0.0031 16.6 3.4 26 23-48 72-97 (183)
471 PRK02301 putative deoxyhypusin 24.0 1.9E+02 0.0041 17.9 4.9 35 25-61 61-95 (316)
472 cd01972 Nitrogenase_VnfE_like 24.0 2E+02 0.0043 18.3 5.4 57 6-63 74-133 (426)
473 KOG0071|consensus 23.8 1.4E+02 0.0031 16.4 4.7 39 10-48 72-110 (180)
474 PRK07476 eutB threonine dehydr 23.8 1.8E+02 0.0039 17.6 3.6 25 38-62 154-178 (322)
475 PLN02166 dTDP-glucose 4,6-dehy 23.7 33 0.00072 21.7 0.4 13 51-63 184-196 (436)
476 TIGR01381 E1_like_apg7 E1-like 23.5 2.6E+02 0.0057 19.4 4.7 25 7-31 395-419 (664)
477 cd00494 HMBS Hydroxymethylbila 23.4 1.9E+02 0.0041 17.7 3.4 51 11-61 17-79 (292)
478 PF13277 YmdB: YmdB-like prote 23.4 1.8E+02 0.0038 17.4 4.0 21 38-59 15-35 (253)
479 TIGR00321 dhys deoxyhypusine s 23.4 1.9E+02 0.0041 17.8 5.3 36 25-62 49-84 (301)
480 PRK06046 alanine dehydrogenase 23.4 1.9E+02 0.004 17.7 4.2 18 2-19 160-177 (326)
481 TIGR01279 DPOR_bchN light-inde 23.3 2.1E+02 0.0045 18.2 6.0 56 7-63 70-128 (407)
482 TIGR03253 oxalate_frc formyl-C 23.3 2.1E+02 0.0045 18.2 4.2 32 25-60 66-97 (415)
483 PRK14038 ADP-dependent glucoki 23.3 2.3E+02 0.0049 18.6 4.1 72 3-76 289-360 (453)
484 PRK01066 porphobilinogen deami 23.2 1.7E+02 0.0037 17.2 5.1 51 10-60 33-95 (231)
485 TIGR00006 S-adenosyl-methyltra 23.1 1.9E+02 0.0042 17.7 4.6 54 3-63 51-104 (305)
486 PRK08617 acetolactate synthase 23.1 2.3E+02 0.005 18.6 4.2 42 21-62 431-472 (552)
487 PRK12440 acetate kinase; Revie 23.0 1.7E+02 0.0036 18.8 3.2 15 49-63 318-332 (397)
488 PRK07586 hypothetical protein; 22.8 2.3E+02 0.0049 18.4 4.1 42 21-62 402-443 (514)
489 cd05212 NAD_bind_m-THF_DH_Cycl 22.8 1.4E+02 0.003 15.9 3.6 49 2-62 34-82 (140)
490 smart00852 MoCF_biosynth Proba 22.7 1.3E+02 0.0027 15.5 8.1 62 11-77 22-83 (135)
491 PRK05398 formyl-coenzyme A tra 22.7 2.2E+02 0.0047 18.2 4.2 31 25-59 67-97 (416)
492 PRK06096 molybdenum transport 22.6 1.9E+02 0.0042 17.5 4.7 35 24-60 209-243 (284)
493 TIGR01774 PFL2-3 pyruvate form 22.6 2.3E+02 0.005 20.0 4.0 66 9-77 714-779 (786)
494 PF00107 ADH_zinc_N: Zinc-bind 22.5 1.2E+02 0.0026 15.0 2.6 21 41-61 46-68 (130)
495 PRK00180 acetate kinase A/prop 22.1 1.9E+02 0.0041 18.6 3.3 13 50-62 322-334 (402)
496 PRK06141 ornithine cyclodeamin 21.9 1.9E+02 0.0041 17.5 3.3 16 2-17 156-171 (314)
497 PRK14027 quinate/shikimate deh 21.9 1.9E+02 0.0042 17.3 3.9 18 2-19 157-174 (283)
498 cd02003 TPP_IolD Thiamine pyro 21.8 1.6E+02 0.0035 16.4 4.0 41 21-61 65-105 (205)
499 TIGR03249 KdgD 5-dehydro-4-deo 21.8 1.9E+02 0.0042 17.3 4.1 9 9-17 28-36 (296)
500 cd03074 PDI_b'_Calsequestrin_C 21.8 44 0.00095 17.2 0.6 51 29-84 27-83 (120)
No 1
>KOG1205|consensus
Probab=99.76 E-value=4.1e-18 Score=96.51 Aligned_cols=83 Identities=22% Similarity=0.277 Sum_probs=72.9
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
+.|+.++++.+.+++++..+..+++++++|+++.+++.++++++..++|++|+||||||+.. .....+.++++++|++
T Consensus 42 var~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdt 121 (282)
T KOG1205|consen 42 VARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDT 121 (282)
T ss_pred eehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhh
Confidence 56778888989899988875436999999999999999999999999999999999999877 3446778999999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|++|+
T Consensus 122 N~~G~ 126 (282)
T KOG1205|consen 122 NVFGT 126 (282)
T ss_pred hchhh
Confidence 99984
No 2
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.73 E-value=1.1e-17 Score=94.15 Aligned_cols=82 Identities=22% Similarity=0.297 Sum_probs=76.0
Q ss_pred CCccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhc
Q psy13141 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQ 78 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~ 78 (84)
|++|++++++++.++++..+ +..+.++++|+++++++.++.+.+.+..+.+|+||||||+.. ++.+.+.+..+++++
T Consensus 35 LvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~ 113 (265)
T COG0300 35 LVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQ 113 (265)
T ss_pred EEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHH
Confidence 47899999999999999987 788999999999999999999999999899999999999876 678999999999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 114 lN~~a 118 (265)
T COG0300 114 LNILA 118 (265)
T ss_pred HHHHH
Confidence 99875
No 3
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.73 E-value=1.5e-17 Score=91.99 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=70.9
Q ss_pred CCccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhc
Q psy13141 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQ 78 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~ 78 (84)
+++|+.++++++..++.+ ..++++..|++|.+++..++..+.+.++++|+||||||... +..+.+.++|+.+++
T Consensus 35 l~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid 110 (246)
T COG4221 35 LAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMID 110 (246)
T ss_pred EEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHH
Confidence 468999999999988853 46889999999999999999999999999999999999765 566889999999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.|
T Consensus 111 ~Ni~G 115 (246)
T COG4221 111 TNVKG 115 (246)
T ss_pred HHHHH
Confidence 99876
No 4
>KOG1208|consensus
Probab=99.67 E-value=2.1e-16 Score=91.17 Aligned_cols=84 Identities=37% Similarity=0.515 Sum_probs=76.1
Q ss_pred CCccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccc
Q psy13141 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQID 80 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n 80 (84)
+++|+.+..+++++.++...+...+.++++|+++.++++++.+.+...++++|++|||||++.+....+.|.++.+|.+|
T Consensus 64 ~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN 143 (314)
T KOG1208|consen 64 LACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATN 143 (314)
T ss_pred EEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhh
Confidence 46899999999999999866677899999999999999999999999999999999999999866678889999999999
Q ss_pred eecC
Q psy13141 81 QSEV 84 (84)
Q Consensus 81 ~~~~ 84 (84)
+.|+
T Consensus 144 ~lg~ 147 (314)
T KOG1208|consen 144 YLGH 147 (314)
T ss_pred hHHH
Confidence 9874
No 5
>KOG1201|consensus
Probab=99.62 E-value=1.5e-15 Score=86.22 Aligned_cols=79 Identities=14% Similarity=0.162 Sum_probs=71.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++.+.+..+++.+++++. | +++.+.||+++.+++.+..+++++..|.++++|||||+.. ++.+.+.+.+++.+++
T Consensus 68 ~Din~~~~~etv~~~~~~--g-~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 68 WDINKQGNEETVKEIRKI--G-EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred EeccccchHHHHHHHHhc--C-ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 567778888888888876 4 7999999999999999999999999999999999999876 5668999999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.|
T Consensus 145 N~~~ 148 (300)
T KOG1201|consen 145 NTIA 148 (300)
T ss_pred hhHH
Confidence 9876
No 6
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.61 E-value=4.2e-15 Score=85.88 Aligned_cols=83 Identities=30% Similarity=0.402 Sum_probs=71.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC-cccCChhhhhhhhccc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI-LNRITKDGLQLGMQID 80 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n 80 (84)
++|+.+++++..+++....++..+.++.+|+++.++++++++.+.+.++++|++|||||...+ ..+.+.+.|+.+|++|
T Consensus 44 ~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN 123 (313)
T PRK05854 44 PVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTN 123 (313)
T ss_pred EeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhh
Confidence 578888888888888776555678899999999999999999999999999999999998763 4467789999999999
Q ss_pred eecC
Q psy13141 81 QSEV 84 (84)
Q Consensus 81 ~~~~ 84 (84)
+.|+
T Consensus 124 ~~g~ 127 (313)
T PRK05854 124 HLGH 127 (313)
T ss_pred hHHH
Confidence 8763
No 7
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.57 E-value=1.8e-14 Score=81.29 Aligned_cols=82 Identities=21% Similarity=0.281 Sum_probs=70.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++..+++...+++.++..+.+|+++.+++.++++.+.+.++++|++|||||... ++.+.+.++|++.+++
T Consensus 38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T PRK07062 38 CGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELEL 117 (265)
T ss_pred EeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 57888888888888877665567889999999999999999999999999999999999764 4567888999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 118 n~~~ 121 (265)
T PRK07062 118 KYFS 121 (265)
T ss_pred HhHH
Confidence 9865
No 8
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.55 E-value=1.7e-14 Score=76.48 Aligned_cols=80 Identities=18% Similarity=0.299 Sum_probs=69.2
Q ss_pred Cccc--hhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhh
Q psy13141 2 ACRD--LGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGM 77 (84)
Q Consensus 2 ~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~ 77 (84)
++|+ .+..+++..++... +.+++++++|++++++++++++.+.+.++++|++|||+|... +..+.+.+.|+++|
T Consensus 31 ~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~ 108 (167)
T PF00106_consen 31 TSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVF 108 (167)
T ss_dssp EESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHH
T ss_pred eeeccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcc
Confidence 4566 66777787888755 678999999999999999999999999999999999999877 45577899999999
Q ss_pred ccceec
Q psy13141 78 QIDQSE 83 (84)
Q Consensus 78 ~~n~~~ 83 (84)
++|+.+
T Consensus 109 ~~n~~~ 114 (167)
T PF00106_consen 109 RVNLFG 114 (167)
T ss_dssp HHHTHH
T ss_pred ccccce
Confidence 999875
No 9
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.54 E-value=3.6e-14 Score=82.62 Aligned_cols=80 Identities=24% Similarity=0.267 Sum_probs=69.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+++... +.++..+.+|+++.++++++++.+.+.++++|++|||||... ++.+.+.++|++.+++
T Consensus 37 ~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~v 114 (330)
T PRK06139 37 AARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQT 114 (330)
T ss_pred EECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 578888888888888765 567888899999999999999999998899999999999765 4668888999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 115 N~~g 118 (330)
T PRK06139 115 NLIG 118 (330)
T ss_pred hhHH
Confidence 9876
No 10
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.53 E-value=6.5e-14 Score=78.60 Aligned_cols=81 Identities=21% Similarity=0.180 Sum_probs=68.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+++... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++++++
T Consensus 39 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (253)
T PRK05867 39 AARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNT 116 (253)
T ss_pred EcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 467777778777777655 456888999999999999999999999999999999999765 4557788999999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|+.++
T Consensus 117 n~~~~ 121 (253)
T PRK05867 117 NVTGV 121 (253)
T ss_pred cchhH
Confidence 98763
No 11
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.52 E-value=7.3e-14 Score=79.85 Aligned_cols=76 Identities=17% Similarity=0.273 Sum_probs=64.2
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceecC
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+.++++.+++... +.++..+.+|+++.+++.++++.+.+.+|++|++|||||... ++.+.+.++|++++++|+.++
T Consensus 50 ~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~ 127 (286)
T PRK07791 50 SAAQAVVDEIVAA--GGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGH 127 (286)
T ss_pred hHHHHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHH
Confidence 5566677777654 556888999999999999999999999999999999999865 456788899999999998763
No 12
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.51 E-value=8.7e-14 Score=79.16 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=68.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+++... +.++..+.+|+++++++.++++.+.+.++++|++|||||... ++.+.+.++|++.+++
T Consensus 36 ~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (275)
T PRK05876 36 GDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDV 113 (275)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhh
Confidence 467777777777777654 456888999999999999999999999999999999999754 4567889999999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|+.|+
T Consensus 114 N~~g~ 118 (275)
T PRK05876 114 DLWGS 118 (275)
T ss_pred hhHHH
Confidence 98763
No 13
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.50 E-value=1.1e-13 Score=77.83 Aligned_cols=82 Identities=21% Similarity=0.165 Sum_probs=68.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+++...+++.++..+++|+++++++.++++.+.+.++++|++|||||... +..+.+.++|++++++
T Consensus 37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (260)
T PRK07063 37 ADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAV 116 (260)
T ss_pred EeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHh
Confidence 46788888888888776333557888999999999999999999999999999999999754 3456788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 117 n~~~ 120 (260)
T PRK07063 117 DLDG 120 (260)
T ss_pred hhHH
Confidence 9875
No 14
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.50 E-value=9.7e-14 Score=77.89 Aligned_cols=80 Identities=14% Similarity=0.201 Sum_probs=68.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+.++++.+++... +.++..+.+|+++++++.++++.+.+.++++|++|||||... ++.+.+.++|++.++
T Consensus 36 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 113 (254)
T PRK07478 36 GARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLA 113 (254)
T ss_pred EeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 467888888887777655 456888999999999999999999999999999999999754 455778899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 114 ~N~~~ 118 (254)
T PRK07478 114 TNLTS 118 (254)
T ss_pred HHhHH
Confidence 99865
No 15
>PLN00015 protochlorophyllide reductase
Probab=99.50 E-value=9.8e-14 Score=80.03 Aligned_cols=81 Identities=33% Similarity=0.390 Sum_probs=65.9
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+.++++..++... +..+..+.+|+++.++++++++.+.+.++++|++|||||+.. +..+.+.++|+++|+
T Consensus 28 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~ 105 (308)
T PLN00015 28 ACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVG 105 (308)
T ss_pred EeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHH
Confidence 467777777776666432 446788899999999999999999988899999999999854 344678899999999
Q ss_pred cceecC
Q psy13141 79 IDQSEV 84 (84)
Q Consensus 79 ~n~~~~ 84 (84)
+|+.|+
T Consensus 106 vN~~g~ 111 (308)
T PLN00015 106 TNHLGH 111 (308)
T ss_pred HHhHHH
Confidence 998763
No 16
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.50 E-value=1.4e-13 Score=77.83 Aligned_cols=80 Identities=11% Similarity=0.130 Sum_probs=66.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+++.... +.++..+.+|++++++++++++.+. .+|++|++|||+|... ++.+.+.++|++.+++
T Consensus 38 ~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~ 115 (263)
T PRK08339 38 LSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKL 115 (263)
T ss_pred EeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5788888887777776543 4468889999999999999999986 5789999999999765 4557889999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 116 n~~~ 119 (263)
T PRK08339 116 LLYP 119 (263)
T ss_pred HhHH
Confidence 9875
No 17
>KOG0725|consensus
Probab=99.49 E-value=1.6e-13 Score=78.06 Aligned_cols=83 Identities=14% Similarity=0.176 Sum_probs=71.5
Q ss_pred CCccchhhHHHHHHHHHhhc-CCceeEEEEeecCCHHHHHHHHHHHHhh-cCCcceEEEcccCCC---CcccCChhhhhh
Q psy13141 1 MACRDLGKANGVRESIITKT-NNHQVVVKKLDLASLDSVREFAAQILDE-EKHIHVLINNAGQGG---ILNRITKDGLQL 75 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~lv~~ag~~~---~~~~~~~~~~~~ 75 (84)
+++|+.+.+++...++.... .+.++..+.||+++.++++.+++...+. +|++|++|||||... +..+.+.+.|++
T Consensus 37 i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~ 116 (270)
T KOG0725|consen 37 ITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDK 116 (270)
T ss_pred EEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHH
Confidence 46888888888888877653 2456899999999999999999999988 799999999999876 356899999999
Q ss_pred hhccceec
Q psy13141 76 GMQIDQSE 83 (84)
Q Consensus 76 ~~~~n~~~ 83 (84)
.+++|+.|
T Consensus 117 ~~~~Nl~G 124 (270)
T KOG0725|consen 117 IMATNLRG 124 (270)
T ss_pred HHhhhchh
Confidence 99999985
No 18
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.48 E-value=1.5e-13 Score=77.31 Aligned_cols=61 Identities=18% Similarity=0.238 Sum_probs=53.8
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhhhccceec
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~ 83 (84)
..++.+++|++++++++++++.+.+.+|++|++|||||... ++.+.+.++|++.+++|+.+
T Consensus 55 ~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~ 121 (252)
T PRK06079 55 EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYS 121 (252)
T ss_pred CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHH
Confidence 35778999999999999999999999999999999999753 34578889999999999876
No 19
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.48 E-value=2.1e-13 Score=77.69 Aligned_cols=59 Identities=14% Similarity=0.289 Sum_probs=52.3
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhhhccceecC
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~ 84 (84)
..+++|+++.++++++++.+.+.+|++|++|||||+.. ++.+.+.++|+++|++|+.++
T Consensus 58 ~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~ 122 (274)
T PRK08415 58 YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSL 122 (274)
T ss_pred eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHH
Confidence 57889999999999999999999999999999999752 355788999999999998764
No 20
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.47 E-value=2e-13 Score=79.56 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=69.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+++... +.++..+.+|++++++++++++.+.+.++++|++|||+|... ++.+.+.++|++.+++
T Consensus 38 ~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~v 115 (334)
T PRK07109 38 LARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEV 115 (334)
T ss_pred EECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHH
Confidence 568888888888888755 567888999999999999999999999999999999999754 4567889999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 116 N~~g 119 (334)
T PRK07109 116 TYLG 119 (334)
T ss_pred HhHH
Confidence 9875
No 21
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.47 E-value=2.3e-13 Score=78.29 Aligned_cols=82 Identities=33% Similarity=0.404 Sum_probs=67.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccce
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~ 81 (84)
++|+.+.+++..+++....++..+.++.+|+++.+++.++++.+.+.++++|++|||||...+....+.+.++..|++|+
T Consensus 46 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~ 125 (306)
T PRK06197 46 AVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNH 125 (306)
T ss_pred EeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhh
Confidence 46777777777777765544456888999999999999999999999999999999999866544567788999999998
Q ss_pred ec
Q psy13141 82 SE 83 (84)
Q Consensus 82 ~~ 83 (84)
.|
T Consensus 126 ~g 127 (306)
T PRK06197 126 LG 127 (306)
T ss_pred HH
Confidence 76
No 22
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.47 E-value=2.2e-13 Score=76.86 Aligned_cols=74 Identities=9% Similarity=0.147 Sum_probs=59.8
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhhhcccee
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~ 82 (84)
.++..+++... ...+..+++|++++++++++++.+.+.+|++|++|||+|+.. ++.+.+.++|+++|++|+.
T Consensus 47 ~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~ 124 (258)
T PRK07370 47 FEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAY 124 (258)
T ss_pred HHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeH
Confidence 34445555443 234678899999999999999999999999999999999753 4557888999999999987
Q ss_pred cC
Q psy13141 83 EV 84 (84)
Q Consensus 83 ~~ 84 (84)
++
T Consensus 125 ~~ 126 (258)
T PRK07370 125 SL 126 (258)
T ss_pred HH
Confidence 63
No 23
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.47 E-value=2e-13 Score=77.34 Aligned_cols=78 Identities=17% Similarity=0.226 Sum_probs=60.1
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC-------cccCChhhhhh
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI-------LNRITKDGLQL 75 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-------~~~~~~~~~~~ 75 (84)
+|+ +++++..+++.... ..+..+.+|++++++++++++.+.+.+|++|++|||||+... +.+.+.++|++
T Consensus 39 ~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~ 115 (262)
T PRK07984 39 YQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKI 115 (262)
T ss_pred ecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHH
Confidence 454 33444555555442 245678899999999999999999999999999999997531 33567899999
Q ss_pred hhccceec
Q psy13141 76 GMQIDQSE 83 (84)
Q Consensus 76 ~~~~n~~~ 83 (84)
.+++|+.+
T Consensus 116 ~~~~n~~~ 123 (262)
T PRK07984 116 AHDISSYS 123 (262)
T ss_pred HhhhhhHH
Confidence 99999876
No 24
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.47 E-value=1.2e-13 Score=75.29 Aligned_cols=78 Identities=22% Similarity=0.222 Sum_probs=64.2
Q ss_pred CCccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC--cc--cCChhhhhhh
Q psy13141 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI--LN--RITKDGLQLG 76 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~--~~~~~~~~~~ 76 (84)
+++|++++++++++.. ..++...||+.|.++.++++.++++.++.++++|||||+... +. +...++...-
T Consensus 34 i~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~e 107 (245)
T COG3967 34 ICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQE 107 (245)
T ss_pred EecCcHHHHHHHHhcC------cchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHH
Confidence 4789988888777653 457888999999999999999999999999999999999873 22 4445667778
Q ss_pred hccceecC
Q psy13141 77 MQIDQSEV 84 (84)
Q Consensus 77 ~~~n~~~~ 84 (84)
+++|+.+|
T Consensus 108 I~~Nl~AP 115 (245)
T COG3967 108 IATNLLAP 115 (245)
T ss_pred HHHhhhhH
Confidence 88998765
No 25
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.47 E-value=3.2e-13 Score=75.11 Aligned_cols=80 Identities=16% Similarity=0.114 Sum_probs=66.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcC-CcceEEEcccCCC---CcccCChhhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEK-HIHVLINNAGQGG---ILNRITKDGLQLGM 77 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~lv~~ag~~~---~~~~~~~~~~~~~~ 77 (84)
++|+.+.++++.+++.+. +.++..+.+|++++++++++++.+.+.++ ++|++|||+|... ++.+.+.++|.+.+
T Consensus 35 ~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~ 112 (227)
T PRK08862 35 CDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQL 112 (227)
T ss_pred EcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHH
Confidence 578888888888887665 45678889999999999999999999988 9999999998543 45577888999999
Q ss_pred ccceec
Q psy13141 78 QIDQSE 83 (84)
Q Consensus 78 ~~n~~~ 83 (84)
++|+.+
T Consensus 113 ~~~~~~ 118 (227)
T PRK08862 113 SSLAST 118 (227)
T ss_pred HHhhHH
Confidence 888754
No 26
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.47 E-value=2.9e-13 Score=78.29 Aligned_cols=81 Identities=32% Similarity=0.418 Sum_probs=65.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC---cccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI---LNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~ 78 (84)
++|+.+.++++.+++... +..+..+.+|+++.++++++++.+.+.++++|++|||||+..+ ....+.++|+++++
T Consensus 34 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~ 111 (314)
T TIGR01289 34 ACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVG 111 (314)
T ss_pred EeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHh
Confidence 467777777777666432 4567888999999999999999998888999999999997542 23567899999999
Q ss_pred cceecC
Q psy13141 79 IDQSEV 84 (84)
Q Consensus 79 ~n~~~~ 84 (84)
+|+.|+
T Consensus 112 vN~~~~ 117 (314)
T TIGR01289 112 TNHLGH 117 (314)
T ss_pred hhhhHH
Confidence 998763
No 27
>PRK05599 hypothetical protein; Provisional
Probab=99.46 E-value=3.1e-13 Score=75.81 Aligned_cols=81 Identities=20% Similarity=0.179 Sum_probs=65.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC--cccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI--LNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.++++..+ +..+..+++|++++++++++++.+.+.+|++|++|||+|...+ ..+.+.+.+.+.+++
T Consensus 29 ~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~ 107 (246)
T PRK05599 29 AARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATV 107 (246)
T ss_pred EeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHH
Confidence 5788888888888887653 2347789999999999999999999999999999999998653 335566777788888
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 108 n~~~ 111 (246)
T PRK05599 108 DYTA 111 (246)
T ss_pred HHHh
Confidence 8654
No 28
>PRK08589 short chain dehydrogenase; Validated
Probab=99.46 E-value=4.6e-13 Score=76.01 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=65.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+ +.+++..+++... +.++..+.+|+++++++.++++.+.+.++++|++|||||... +..+.+.+.|+++++
T Consensus 36 ~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (272)
T PRK08589 36 VDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMA 112 (272)
T ss_pred EeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 3566 6667777777654 456888999999999999999999999999999999999764 344678899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 113 ~n~~~ 117 (272)
T PRK08589 113 VDMRG 117 (272)
T ss_pred HHhHH
Confidence 99875
No 29
>PRK05855 short chain dehydrogenase; Validated
Probab=99.45 E-value=3.3e-13 Score=82.68 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=69.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+.++.. +.++..+.+|+++++++.++++.+.+.+|++|++|||||... ++.+.+.++|++++++
T Consensus 345 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 422 (582)
T PRK05855 345 SDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDV 422 (582)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHH
Confidence 478888888887777665 557889999999999999999999999999999999999865 4567888999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.|
T Consensus 423 n~~g 426 (582)
T PRK05855 423 NLWG 426 (582)
T ss_pred hhHH
Confidence 9876
No 30
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.45 E-value=4.9e-13 Score=75.04 Aligned_cols=81 Identities=21% Similarity=0.206 Sum_probs=66.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+++... +.++..+++|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++
T Consensus 31 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~ 108 (252)
T PRK07677 31 TGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDI 108 (252)
T ss_pred EeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhH
Confidence 467777777777666554 456888999999999999999999999999999999998643 4557889999999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|+.++
T Consensus 109 n~~~~ 113 (252)
T PRK07677 109 VLNGT 113 (252)
T ss_pred hhHHH
Confidence 98753
No 31
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.45 E-value=4.1e-13 Score=77.07 Aligned_cols=79 Identities=13% Similarity=0.208 Sum_probs=65.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+++.. +..+..+.+|+++.+++..+++.+.+.++++|++|||+|... ++.+.+.++|++++++
T Consensus 39 ~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~v 115 (296)
T PRK05872 39 VDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDV 115 (296)
T ss_pred EeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHH
Confidence 46777777777666532 345677789999999999999999999999999999999865 4667889999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.|
T Consensus 116 n~~g 119 (296)
T PRK05872 116 NLLG 119 (296)
T ss_pred HhHH
Confidence 9876
No 32
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.45 E-value=4.1e-13 Score=76.34 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=52.1
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhhhccceecC
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~ 84 (84)
..+++|++++++++++++.+.+.+|++|++|||||... ++.+.+.++|++++++|+.++
T Consensus 60 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~ 124 (271)
T PRK06505 60 FVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSF 124 (271)
T ss_pred eEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhH
Confidence 56889999999999999999999999999999999753 345788999999999998763
No 33
>PRK09242 tropinone reductase; Provisional
Probab=99.45 E-value=6.3e-13 Score=74.73 Aligned_cols=82 Identities=18% Similarity=0.178 Sum_probs=69.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++..+++...+++.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.++|++.+++
T Consensus 39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 118 (257)
T PRK09242 39 VARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFET 118 (257)
T ss_pred EeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhh
Confidence 46777777878777776655667889999999999999999999999999999999999754 3457788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 119 n~~~ 122 (257)
T PRK09242 119 NLFS 122 (257)
T ss_pred hhHH
Confidence 9875
No 34
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.44 E-value=4.2e-13 Score=75.70 Aligned_cols=60 Identities=15% Similarity=0.253 Sum_probs=52.5
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhhhccceecC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+..+++|+++.++++++++.+.+.+|++|++|||||+.. ++.+.+.++|+++|++|+.++
T Consensus 62 ~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~ 127 (258)
T PRK07533 62 PIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSF 127 (258)
T ss_pred ceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHH
Confidence 467889999999999999999999999999999999753 345778899999999998763
No 35
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.44 E-value=8.1e-13 Score=74.28 Aligned_cols=72 Identities=21% Similarity=0.231 Sum_probs=59.4
Q ss_pred HHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceecC
Q psy13141 11 GVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+..+.++.. +.++..+.+|+++++++.++++.+.+.++++|++|||||... ++.+.+.++|++++++|+.++
T Consensus 45 ~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~ 118 (251)
T PRK12481 45 ETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTV 118 (251)
T ss_pred HHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHH
Confidence 344444433 456888999999999999999999999999999999999765 455788899999999998763
No 36
>KOG1200|consensus
Probab=99.44 E-value=3.8e-13 Score=72.95 Aligned_cols=79 Identities=15% Similarity=0.099 Sum_probs=63.8
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC--cccCChhhhhhhhccc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI--LNRITKDGLQLGMQID 80 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n 80 (84)
+++....+++...+.. ......+.||++++++++..+++...++|+++++|||||+... ...+..++|++++.+|
T Consensus 45 dl~~~~A~ata~~L~g---~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vN 121 (256)
T KOG1200|consen 45 DLDSAAAEATAGDLGG---YGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVN 121 (256)
T ss_pred ecchhhHHHHHhhcCC---CCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhh
Confidence 4455555555555533 1467889999999999999999999999999999999999884 3477889999999999
Q ss_pred eecC
Q psy13141 81 QSEV 84 (84)
Q Consensus 81 ~~~~ 84 (84)
+.|+
T Consensus 122 L~gv 125 (256)
T KOG1200|consen 122 LTGV 125 (256)
T ss_pred chhh
Confidence 9873
No 37
>PRK08643 acetoin reductase; Validated
Probab=99.43 E-value=8.8e-13 Score=74.08 Aligned_cols=80 Identities=19% Similarity=0.252 Sum_probs=66.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++..++... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.++|++.+++
T Consensus 32 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T PRK08643 32 VDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNI 109 (256)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 467777777777777654 456788999999999999999999999999999999999764 4557788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 110 n~~~ 113 (256)
T PRK08643 110 NVGG 113 (256)
T ss_pred hhHH
Confidence 9875
No 38
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.43 E-value=7.7e-13 Score=74.27 Aligned_cols=80 Identities=15% Similarity=0.139 Sum_probs=67.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++..+++... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++
T Consensus 39 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (254)
T PRK08085 39 NDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAV 116 (254)
T ss_pred EcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 467777777777777654 456788899999999999999999999999999999999764 4557888999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 117 n~~~ 120 (254)
T PRK08085 117 NQTA 120 (254)
T ss_pred HhHH
Confidence 9875
No 39
>KOG4169|consensus
Probab=99.43 E-value=7.9e-13 Score=72.99 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=60.1
Q ss_pred HHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 11 GVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
+...++++.+|...+.+++||+++..++++.++++...+|++|++||+||+. +..+|++.+.+|+.|
T Consensus 43 ~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~------~dkd~e~Ti~vNLtg 109 (261)
T KOG4169|consen 43 EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGIL------DDKDWERTINVNLTG 109 (261)
T ss_pred HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEcccccc------cchhHHHhhccchhh
Confidence 3556778888888999999999999999999999999999999999999994 357899999999876
No 40
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.43 E-value=6.5e-13 Score=75.55 Aligned_cols=60 Identities=12% Similarity=0.184 Sum_probs=52.4
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhhhccceecC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~ 84 (84)
...+++|++++++++++++.+.+.++++|++|||||+.. ++.+.+.++|++.|++|+.++
T Consensus 62 ~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~ 127 (272)
T PRK08159 62 FVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSF 127 (272)
T ss_pred ceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHH
Confidence 456889999999999999999999999999999999753 345778899999999998763
No 41
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.42 E-value=1e-12 Score=74.24 Aligned_cols=80 Identities=18% Similarity=0.131 Sum_probs=66.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
.+|+.+.+++..+.+... +.++..+++|+++.+++.++++.+.+.++++|++|||+|... +..+.+.+.|++++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T PRK07097 40 NDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDI 117 (265)
T ss_pred EeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHh
Confidence 356666777777666654 456888999999999999999999999999999999999865 4557788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 118 n~~~ 121 (265)
T PRK07097 118 DLNA 121 (265)
T ss_pred hhHH
Confidence 9875
No 42
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.42 E-value=5.5e-13 Score=75.18 Aligned_cols=61 Identities=8% Similarity=0.178 Sum_probs=52.9
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhhhccceecC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~~ 84 (84)
.+..+++|++++++++++++.+.+.++++|++|||||+.. ++.+.+.++|++++++|+.++
T Consensus 58 ~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~ 124 (256)
T PRK07889 58 PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSL 124 (256)
T ss_pred CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHH
Confidence 5678899999999999999999999999999999999763 344667899999999998763
No 43
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.42 E-value=8.4e-13 Score=74.59 Aligned_cols=78 Identities=9% Similarity=0.113 Sum_probs=59.3
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhh
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLG 76 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~ 76 (84)
+|+ +..++..+++.... +. ...+++|++++++++++++.+.+.+|++|++|||+|... ++.+.+.++|+++
T Consensus 41 ~r~-~~~~~~~~~l~~~~-g~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~ 117 (260)
T PRK06603 41 YQS-EVLEKRVKPLAEEI-GC-NFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNS 117 (260)
T ss_pred eCc-hHHHHHHHHHHHhc-CC-ceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHH
Confidence 444 23344445554432 22 346789999999999999999999999999999999753 3457788999999
Q ss_pred hccceec
Q psy13141 77 MQIDQSE 83 (84)
Q Consensus 77 ~~~n~~~ 83 (84)
+++|+.+
T Consensus 118 ~~vn~~~ 124 (260)
T PRK06603 118 LHISCYS 124 (260)
T ss_pred HHHHHHH
Confidence 9999876
No 44
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.41 E-value=8.2e-13 Score=76.26 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=60.4
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcc-cCC------CCcccCChhhhhhhhcc
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNA-GQG------GILNRITKDGLQLGMQI 79 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a-g~~------~~~~~~~~~~~~~~~~~ 79 (84)
+.++++.+++... +.++..+++|++++++++.+++.+.+.+|++|++|||+ |.. .++.+.+.++|++++++
T Consensus 53 ~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (305)
T PRK08303 53 ETIEETAELVTAA--GGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRL 130 (305)
T ss_pred chHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHH
Confidence 4555666666544 45678899999999999999999999999999999999 742 23446778899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 131 n~~~ 134 (305)
T PRK08303 131 AIDT 134 (305)
T ss_pred hhHH
Confidence 9875
No 45
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.41 E-value=9.4e-13 Score=74.43 Aligned_cols=73 Identities=15% Similarity=0.207 Sum_probs=56.4
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC-------cccCChhhhhhhhccce
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI-------LNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~ 81 (84)
..+..+++.... + ....+++|++++++++.+++.+.+.++++|++|||||+... ..+.+.+.|+..+++|+
T Consensus 44 ~~~~~~~~~~~~-~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~ 121 (261)
T PRK08690 44 LEERVRKMAAEL-D-SELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISA 121 (261)
T ss_pred HHHHHHHHHhcc-C-CceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhch
Confidence 334444444332 2 34578999999999999999999999999999999998642 23567789999999998
Q ss_pred ec
Q psy13141 82 SE 83 (84)
Q Consensus 82 ~~ 83 (84)
.+
T Consensus 122 ~~ 123 (261)
T PRK08690 122 YS 123 (261)
T ss_pred HH
Confidence 65
No 46
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.40 E-value=1.9e-12 Score=72.76 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=64.5
Q ss_pred ccch-hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 3 CRDL-GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 3 ~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
+|+. ..++++.+.+... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.++|++.+++
T Consensus 39 ~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (254)
T PRK06114 39 DLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDI 116 (254)
T ss_pred eCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhh
Confidence 4543 3455666666554 456788899999999999999999999999999999999865 4557788999999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|+.++
T Consensus 117 n~~~~ 121 (254)
T PRK06114 117 NLTGV 121 (254)
T ss_pred cchhh
Confidence 98764
No 47
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.40 E-value=1.2e-12 Score=75.83 Aligned_cols=80 Identities=26% Similarity=0.334 Sum_probs=65.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC---cccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI---LNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~ 78 (84)
++|+.+.++++.+++... +..+..+.+|+++.+++.++++.+.+.++++|++|||||+..+ ....+.++|+..++
T Consensus 36 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (322)
T PRK07453 36 ACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMA 113 (322)
T ss_pred EECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHh
Confidence 467777777777776532 4568889999999999999999988877889999999997653 23567899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.|
T Consensus 114 vN~~g 118 (322)
T PRK07453 114 TNHLG 118 (322)
T ss_pred HHHHH
Confidence 99876
No 48
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.40 E-value=2e-12 Score=72.92 Aligned_cols=82 Identities=17% Similarity=0.210 Sum_probs=67.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++..+.++..+++.++..+++|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 127 (262)
T PRK07831 48 SDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDV 127 (262)
T ss_pred EeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 35677777777777766443346888999999999999999999988899999999999754 4557788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 128 n~~~ 131 (262)
T PRK07831 128 TLTG 131 (262)
T ss_pred hhHH
Confidence 9875
No 49
>PRK06194 hypothetical protein; Provisional
Probab=99.40 E-value=2e-12 Score=73.69 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=66.3
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++..+++... +.++..+.+|+++.+++.++++.+.+.++++|++|||||... ++.+.+.+.|+..+++
T Consensus 36 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (287)
T PRK06194 36 ADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGV 113 (287)
T ss_pred EeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 456666677777666554 456888999999999999999999999999999999999866 3456788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.|
T Consensus 114 N~~g 117 (287)
T PRK06194 114 NLWG 117 (287)
T ss_pred ccHH
Confidence 9876
No 50
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2.1e-12 Score=72.45 Aligned_cols=80 Identities=16% Similarity=0.126 Sum_probs=66.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+.+++..+.+... +.++..+.+|+++.+++..+++.+.+.++++|++|||+|... ++.+.+.++|++.++
T Consensus 37 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 114 (253)
T PRK06172 37 ADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMG 114 (253)
T ss_pred EeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 467777777777777654 556889999999999999999999999999999999999754 345778899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 115 ~n~~~ 119 (253)
T PRK06172 115 VNVKG 119 (253)
T ss_pred HhhHH
Confidence 99875
No 51
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.39 E-value=2.3e-12 Score=72.59 Aligned_cols=79 Identities=15% Similarity=0.160 Sum_probs=64.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGM 77 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~ 77 (84)
++|+.+.+++..+++... + ++..+++|++++++++++++.+.+.++++|++|||+|... ++.+.+.++|.+.+
T Consensus 30 ~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~ 106 (259)
T PRK08340 30 SSRNEENLEKALKELKEY--G-EVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAA 106 (259)
T ss_pred EeCCHHHHHHHHHHHHhc--C-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHH
Confidence 467777777777777643 3 5788999999999999999999999999999999999753 24567778999999
Q ss_pred ccceec
Q psy13141 78 QIDQSE 83 (84)
Q Consensus 78 ~~n~~~ 83 (84)
.+|+.+
T Consensus 107 ~~n~~~ 112 (259)
T PRK08340 107 LLHLVA 112 (259)
T ss_pred hhcchH
Confidence 988764
No 52
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2.8e-12 Score=71.69 Aligned_cols=82 Identities=21% Similarity=0.194 Sum_probs=67.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC--cccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI--LNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++...+....++.+++++.+|+++++++.++++.+.+.++++|++|||+|+..+ ....+.+.+++.+++
T Consensus 32 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 111 (248)
T PRK08251 32 CARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAET 111 (248)
T ss_pred EeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHH
Confidence 467777777777777766556678999999999999999999999999999999999998652 345667888889999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 112 n~~~ 115 (248)
T PRK08251 112 NFVA 115 (248)
T ss_pred HhHH
Confidence 9765
No 53
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.38 E-value=2.9e-12 Score=72.17 Aligned_cols=74 Identities=19% Similarity=0.296 Sum_probs=61.4
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceecC
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~ 84 (84)
..+..+++++. +.++..+++|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+.++
T Consensus 56 ~~~~~~~~~~~--g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 131 (256)
T PRK12859 56 QIQLQEELLKN--GVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRAT 131 (256)
T ss_pred HHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 34455555544 567889999999999999999999999999999999999764 456888999999999998763
No 54
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.38 E-value=2.8e-12 Score=72.63 Aligned_cols=80 Identities=13% Similarity=0.163 Sum_probs=66.9
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++..++... +.++..+++|+++++++..+++.+.+.++++|++|||+|... ++.+.+.++|++.+++
T Consensus 30 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~ 107 (270)
T PRK05650 30 ADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAI 107 (270)
T ss_pred EeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 457777777777777655 556888999999999999999999998899999999999765 3567788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 108 n~~~ 111 (270)
T PRK05650 108 NLMG 111 (270)
T ss_pred ccHH
Confidence 9865
No 55
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.37 E-value=3.1e-12 Score=72.22 Aligned_cols=77 Identities=10% Similarity=0.066 Sum_probs=61.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-CcccCChhhhhhhhccc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-ILNRITKDGLQLGMQID 80 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~n 80 (84)
++|+.+.++++..++ +.++.++++|+++++++.++++.+.+.++++|++|||+|... ...+.+.++|++.+++|
T Consensus 36 ~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n 110 (261)
T PRK08265 36 VDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVN 110 (261)
T ss_pred EeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHh
Confidence 466666555555443 346788999999999999999999999999999999999754 22356789999999999
Q ss_pred eec
Q psy13141 81 QSE 83 (84)
Q Consensus 81 ~~~ 83 (84)
+.+
T Consensus 111 ~~~ 113 (261)
T PRK08265 111 LVS 113 (261)
T ss_pred hHH
Confidence 875
No 56
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.37 E-value=3.2e-12 Score=71.82 Aligned_cols=80 Identities=24% Similarity=0.245 Sum_probs=66.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
.+|+.+.++++.+.+... +.++..+.+|+++.++++.+++.+.+.++++|++|||+|... ++.+.+.++|++++++
T Consensus 40 ~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~ 117 (255)
T PRK07523 40 NGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRT 117 (255)
T ss_pred EeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 467777777777666654 456888999999999999999999999999999999999865 4557788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 118 n~~~ 121 (255)
T PRK07523 118 NISS 121 (255)
T ss_pred HhHH
Confidence 9865
No 57
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.37 E-value=2.2e-12 Score=72.81 Aligned_cols=62 Identities=16% Similarity=0.200 Sum_probs=53.6
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~~~ 83 (84)
+.++..+++|++++++++++++.+.+.+|++|++|||+|+.. ++.+.+.++|.+.+++|+.+
T Consensus 58 ~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 125 (257)
T PRK08594 58 GQESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYS 125 (257)
T ss_pred CCceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHH
Confidence 346788899999999999999999999999999999999753 34477889999999999865
No 58
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.37 E-value=3e-12 Score=71.90 Aligned_cols=80 Identities=16% Similarity=0.225 Sum_probs=67.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.++++.. +.++..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++
T Consensus 41 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 118 (256)
T PRK06124 41 NGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLET 118 (256)
T ss_pred EeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 467777777777777654 456888999999999999999999999999999999999765 4557788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 119 n~~~ 122 (256)
T PRK06124 119 DLVA 122 (256)
T ss_pred HhHH
Confidence 9865
No 59
>PRK06484 short chain dehydrogenase; Validated
Probab=99.37 E-value=2.1e-12 Score=78.75 Aligned_cols=78 Identities=21% Similarity=0.203 Sum_probs=63.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+.++++.+++ +.++..+.+|+++++++.++++.+.+.+|++|++|||||... ++.+.+.++|+++++
T Consensus 299 ~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 373 (520)
T PRK06484 299 IDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYD 373 (520)
T ss_pred EeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHH
Confidence 467766666665544 345677899999999999999999999999999999999763 455788899999999
Q ss_pred cceecC
Q psy13141 79 IDQSEV 84 (84)
Q Consensus 79 ~n~~~~ 84 (84)
+|+.++
T Consensus 374 ~n~~~~ 379 (520)
T PRK06484 374 VNLSGA 379 (520)
T ss_pred hCcHHH
Confidence 998763
No 60
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.37 E-value=5.5e-12 Score=70.96 Aligned_cols=82 Identities=17% Similarity=0.138 Sum_probs=66.9
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+...+++..+.+...++..++..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++
T Consensus 32 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~ 111 (259)
T PRK12384 32 ADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQV 111 (259)
T ss_pred EECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 46777677777766665432246889999999999999999999999999999999999765 3557788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 112 n~~~ 115 (259)
T PRK12384 112 NLVG 115 (259)
T ss_pred ccHH
Confidence 9875
No 61
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.37 E-value=3.6e-12 Score=71.58 Aligned_cols=80 Identities=16% Similarity=0.146 Sum_probs=66.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+.++++..++... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++.++
T Consensus 35 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 112 (258)
T PRK07890 35 AARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIE 112 (258)
T ss_pred EeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 467777777777776654 456888999999999999999999999999999999999754 345778899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 113 ~n~~~ 117 (258)
T PRK07890 113 LNVLG 117 (258)
T ss_pred hhhHH
Confidence 99875
No 62
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.36 E-value=1.5e-12 Score=72.76 Aligned_cols=80 Identities=20% Similarity=0.269 Sum_probs=66.5
Q ss_pred CCccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhc-CCcceEEEcccCCC------CcccCChhhh
Q psy13141 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEE-KHIHVLINNAGQGG------ILNRITKDGL 73 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~lv~~ag~~~------~~~~~~~~~~ 73 (84)
+++|+.+.+++..+++.+.+ +.. ++.+|++++++++++++.+.+.+ |++|++|||+|... ++.+.+.++|
T Consensus 25 ~~~~~~~~~~~~~~~l~~~~-~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~ 101 (241)
T PF13561_consen 25 LTDRNEEKLADALEELAKEY-GAE--VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDW 101 (241)
T ss_dssp EEESSHHHHHHHHHHHHHHT-TSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHH
T ss_pred EEeCChHHHHHHHHHHHHHc-CCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHH
Confidence 35788888777777787775 333 59999999999999999999999 99999999999754 3446788999
Q ss_pred hhhhccceec
Q psy13141 74 QLGMQIDQSE 83 (84)
Q Consensus 74 ~~~~~~n~~~ 83 (84)
++.+++|+++
T Consensus 102 ~~~~~~~~~~ 111 (241)
T PF13561_consen 102 DKTFDINVFS 111 (241)
T ss_dssp HHHHHHHTHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 63
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.36 E-value=2.5e-12 Score=72.69 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=51.0
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC-------cccCChhhhhhhhccceecC
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI-------LNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~n~~~~ 84 (84)
..+++|++++++++.+++.+.+.+|++|++|||||.... ..+.+.++|++.|++|+.++
T Consensus 59 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~ 124 (260)
T PRK06997 59 LVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSF 124 (260)
T ss_pred ceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHH
Confidence 468899999999999999999999999999999997542 23567899999999998763
No 64
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.36 E-value=3.9e-12 Score=71.54 Aligned_cols=72 Identities=19% Similarity=0.249 Sum_probs=59.1
Q ss_pred HHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceecC
Q psy13141 11 GVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+..+.+... +.++..+++|+++.+++.++++.+.+.++++|++|||||... ++.+.+.++|++.+++|+.++
T Consensus 47 ~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~ 120 (253)
T PRK08993 47 ETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSV 120 (253)
T ss_pred HHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHH
Confidence 344444433 456788999999999999999999999999999999999765 355778899999999998763
No 65
>PLN02253 xanthoxin dehydrogenase
Probab=99.36 E-value=4e-12 Score=72.28 Aligned_cols=78 Identities=15% Similarity=0.172 Sum_probs=62.1
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhhc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGMQ 78 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~ 78 (84)
+|+.+..+++.+++.. +.++..+++|+++++++.++++.+.+.++++|++|||||... ++.+.+.++|+++++
T Consensus 49 ~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 125 (280)
T PLN02253 49 DLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFD 125 (280)
T ss_pred eCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHh
Confidence 4555555555554421 346888999999999999999999999999999999999754 245778899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.|
T Consensus 126 ~N~~g 130 (280)
T PLN02253 126 VNVKG 130 (280)
T ss_pred HhhHH
Confidence 99876
No 66
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.36 E-value=5.1e-12 Score=71.82 Aligned_cols=80 Identities=21% Similarity=0.300 Sum_probs=65.3
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-----------------C
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-----------------I 64 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-----------------~ 64 (84)
++|+.+.++++.+++... +.++..+++|+++++++..+++.+.+.++++|++|||+|... +
T Consensus 40 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 117 (278)
T PRK08277 40 LDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKT 117 (278)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccc
Confidence 467777777777777654 457888999999999999999999999999999999999643 1
Q ss_pred cccCChhhhhhhhccceec
Q psy13141 65 LNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 65 ~~~~~~~~~~~~~~~n~~~ 83 (84)
+.+.+.++|++.+++|+.+
T Consensus 118 ~~~~~~~~~~~~~~~n~~~ 136 (278)
T PRK08277 118 FFDLDEEGFEFVFDLNLLG 136 (278)
T ss_pred cccCCHHHHHHHHhhhhHH
Confidence 3466788999999999875
No 67
>PRK06128 oxidoreductase; Provisional
Probab=99.36 E-value=5e-12 Score=72.73 Aligned_cols=74 Identities=19% Similarity=0.226 Sum_probs=61.0
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhccceec
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~ 83 (84)
..+++.+.+... +.++..+.+|+++.+++.++++.+.+.++++|++|||||... ++.+.+.++|++.+++|+.|
T Consensus 93 ~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g 169 (300)
T PRK06128 93 DAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYA 169 (300)
T ss_pred HHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHH
Confidence 344455555544 557888999999999999999999999999999999999753 45578899999999999876
No 68
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.35 E-value=5.8e-12 Score=70.61 Aligned_cols=80 Identities=23% Similarity=0.213 Sum_probs=65.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++...++... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.++|++.+++
T Consensus 30 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 107 (254)
T TIGR02415 30 ADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNV 107 (254)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhh
Confidence 356666666666666544 556888999999999999999999999999999999999764 4557888999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 108 n~~~ 111 (254)
T TIGR02415 108 NVKG 111 (254)
T ss_pred hhHH
Confidence 9865
No 69
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.35 E-value=5.7e-12 Score=71.11 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=63.0
Q ss_pred cchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--------CcccCChhhhhh
Q psy13141 4 RDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--------ILNRITKDGLQL 75 (84)
Q Consensus 4 r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--------~~~~~~~~~~~~ 75 (84)
|+.+.++.+.+.+.... +.++..+.+|++++++++++++.+.+.++++|++|||||... ++.+.+.++|++
T Consensus 41 ~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~ 119 (260)
T PRK08416 41 SNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNN 119 (260)
T ss_pred CCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHH
Confidence 34556666666665443 457889999999999999999999999999999999998642 334667889999
Q ss_pred hhccceec
Q psy13141 76 GMQIDQSE 83 (84)
Q Consensus 76 ~~~~n~~~ 83 (84)
.+++|+.+
T Consensus 120 ~~~~n~~~ 127 (260)
T PRK08416 120 IYTATVNA 127 (260)
T ss_pred HHhhhhHH
Confidence 99999764
No 70
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.35 E-value=5.7e-12 Score=71.63 Aligned_cols=74 Identities=19% Similarity=0.114 Sum_probs=60.7
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceecC
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+++..+++... +.++..+.+|+++++++..+++.+.+.++++|++|||+|... +..+.+.++|++++++|+.++
T Consensus 50 l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~ 125 (273)
T PRK08278 50 IHTAAEEIEAA--GGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGT 125 (273)
T ss_pred HHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHH
Confidence 44455555544 557888999999999999999999998899999999999754 455778899999999998763
No 71
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.34 E-value=6.2e-12 Score=70.11 Aligned_cols=80 Identities=19% Similarity=0.232 Sum_probs=65.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+..+++.+.+... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.++|++.+++
T Consensus 36 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 113 (241)
T PRK07454 36 VARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQL 113 (241)
T ss_pred EeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHh
Confidence 467777777776666554 456888999999999999999999999999999999999765 3456778899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 114 n~~~ 117 (241)
T PRK07454 114 NLTS 117 (241)
T ss_pred ccHH
Confidence 9865
No 72
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.34 E-value=6.4e-12 Score=70.74 Aligned_cols=78 Identities=22% Similarity=0.279 Sum_probs=62.6
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQID 80 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n 80 (84)
+|+ +..+++.+.+... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|
T Consensus 46 ~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n 122 (258)
T PRK06935 46 THG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDIN 122 (258)
T ss_pred eCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh
Confidence 455 4455555555443 456888999999999999999999999999999999999765 45577788999999999
Q ss_pred eec
Q psy13141 81 QSE 83 (84)
Q Consensus 81 ~~~ 83 (84)
+.+
T Consensus 123 ~~~ 125 (258)
T PRK06935 123 LNS 125 (258)
T ss_pred CHH
Confidence 876
No 73
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.34 E-value=8.7e-12 Score=69.76 Aligned_cols=79 Identities=22% Similarity=0.298 Sum_probs=65.9
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQID 80 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n 80 (84)
.|+.+..+++.++++.. +.++..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.+.|...+++|
T Consensus 36 ~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 113 (250)
T PRK08063 36 ARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNIN 113 (250)
T ss_pred CCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh
Confidence 56666777777777655 557888999999999999999999999999999999999754 55677889999999999
Q ss_pred eec
Q psy13141 81 QSE 83 (84)
Q Consensus 81 ~~~ 83 (84)
+.+
T Consensus 114 ~~~ 116 (250)
T PRK08063 114 AKA 116 (250)
T ss_pred hHH
Confidence 765
No 74
>PRK12743 oxidoreductase; Provisional
Probab=99.33 E-value=8.7e-12 Score=70.18 Aligned_cols=78 Identities=21% Similarity=0.250 Sum_probs=64.1
Q ss_pred cchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccce
Q psy13141 4 RDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 4 r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~ 81 (84)
|+.+.++.+.+++... +.++..+.+|++++++++++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+
T Consensus 35 ~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 112 (256)
T PRK12743 35 SDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDV 112 (256)
T ss_pred CChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence 3455566666666554 557889999999999999999999999999999999999765 345678899999999998
Q ss_pred ec
Q psy13141 82 SE 83 (84)
Q Consensus 82 ~~ 83 (84)
.+
T Consensus 113 ~~ 114 (256)
T PRK12743 113 DG 114 (256)
T ss_pred HH
Confidence 75
No 75
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.33 E-value=8.5e-12 Score=70.26 Aligned_cols=83 Identities=18% Similarity=0.200 Sum_probs=64.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCc----ceEEEcccCCCC----ccc-CChhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHI----HVLINNAGQGGI----LNR-ITKDG 72 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i----d~lv~~ag~~~~----~~~-~~~~~ 72 (84)
++|+.+.++++.+++....++.++..+.+|++++++++++++.+.+.++.+ +++|||||.... ..+ .+.++
T Consensus 34 ~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~ 113 (256)
T TIGR01500 34 SARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQ 113 (256)
T ss_pred EEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHH
Confidence 568888888888888764335578889999999999999999998876643 689999997542 122 24689
Q ss_pred hhhhhccceecC
Q psy13141 73 LQLGMQIDQSEV 84 (84)
Q Consensus 73 ~~~~~~~n~~~~ 84 (84)
|++.|++|+.++
T Consensus 114 ~~~~~~vN~~~~ 125 (256)
T TIGR01500 114 VQNYWALNLTSM 125 (256)
T ss_pred HHHHHHhhhHHH
Confidence 999999998763
No 76
>PRK06484 short chain dehydrogenase; Validated
Probab=99.33 E-value=5e-12 Score=77.12 Aligned_cols=78 Identities=23% Similarity=0.214 Sum_probs=63.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGM 77 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~ 77 (84)
++|+.+.+++...++ +.++..+++|++++++++++++.+.+.++++|++|||+|+.. ++.+.+.++|++++
T Consensus 35 ~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~ 109 (520)
T PRK06484 35 ADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQ 109 (520)
T ss_pred EeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHH
Confidence 456666666555444 345778899999999999999999999999999999999742 34578889999999
Q ss_pred ccceecC
Q psy13141 78 QIDQSEV 84 (84)
Q Consensus 78 ~~n~~~~ 84 (84)
++|+.++
T Consensus 110 ~~n~~~~ 116 (520)
T PRK06484 110 AINLTGA 116 (520)
T ss_pred HHhhHHH
Confidence 9998763
No 77
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.33 E-value=1e-11 Score=71.71 Aligned_cols=74 Identities=16% Similarity=0.218 Sum_probs=61.8
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+++.+++... +.++..+.+|+++.+++.++++.+.+ +|++|++|||||... .+.+.+.++|++++++|+.+
T Consensus 48 ~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g 123 (306)
T PRK07792 48 LDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRG 123 (306)
T ss_pred hHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhH
Confidence 4456666667654 56788999999999999999999988 899999999999876 34577889999999999875
No 78
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.33 E-value=8.5e-12 Score=70.51 Aligned_cols=80 Identities=20% Similarity=0.244 Sum_probs=65.9
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+.+... +.++..+.+|+++++++.++++.+.+.++++|++|||||... ++.+.+.++|+..+++
T Consensus 40 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (263)
T PRK07814 40 AARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTF 117 (263)
T ss_pred EeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 467777777777776554 456788899999999999999999999999999999999754 3457788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 118 n~~~ 121 (263)
T PRK07814 118 NVAT 121 (263)
T ss_pred hcHH
Confidence 9875
No 79
>PRK09186 flagellin modification protein A; Provisional
Probab=99.32 E-value=1.2e-11 Score=69.40 Aligned_cols=82 Identities=17% Similarity=0.199 Sum_probs=65.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-----CcccCChhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-----ILNRITKDGLQLG 76 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-----~~~~~~~~~~~~~ 76 (84)
++|+.+.++++.+++...+++..+..+.+|+++++++.++++.+.+.++++|++|||||... ++.+.+.+.|...
T Consensus 34 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~ 113 (256)
T PRK09186 34 ADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNEN 113 (256)
T ss_pred EecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHH
Confidence 46777777777777765432334666799999999999999999999999999999997542 3457788999999
Q ss_pred hccceec
Q psy13141 77 MQIDQSE 83 (84)
Q Consensus 77 ~~~n~~~ 83 (84)
+++|+.+
T Consensus 114 ~~~n~~~ 120 (256)
T PRK09186 114 LSLHLGS 120 (256)
T ss_pred HHHhhhh
Confidence 9999865
No 80
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.8e-11 Score=68.73 Aligned_cols=81 Identities=21% Similarity=0.311 Sum_probs=66.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++...+... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|+.++++
T Consensus 39 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (258)
T PRK06949 39 ASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDT 116 (258)
T ss_pred EeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 467777777777776554 446888999999999999999999998999999999999755 3446678899999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|+.++
T Consensus 117 n~~~~ 121 (258)
T PRK06949 117 NTRGA 121 (258)
T ss_pred cchhh
Confidence 98753
No 81
>PRK07069 short chain dehydrogenase; Validated
Probab=99.32 E-value=1.2e-11 Score=69.13 Aligned_cols=82 Identities=20% Similarity=0.206 Sum_probs=63.6
Q ss_pred Cccc-hhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhc
Q psy13141 2 ACRD-LGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~ 78 (84)
++|+ .+.++++.+++........+..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.++++++++
T Consensus 29 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 108 (251)
T PRK07069 29 TDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMA 108 (251)
T ss_pred EeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 3455 5566666666654432234567889999999999999999999999999999999765 355778889999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 109 ~n~~~ 113 (251)
T PRK07069 109 INVES 113 (251)
T ss_pred HhhHH
Confidence 99864
No 82
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.2e-11 Score=69.35 Aligned_cols=80 Identities=14% Similarity=0.270 Sum_probs=66.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+.++++.+++... +.++..+.+|+++.+++..+++.+.+.++++|++|||+|... +..+.+.++|++.++
T Consensus 38 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 115 (252)
T PRK07035 38 SSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVD 115 (252)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 467777777777777654 456778899999999999999999999999999999999643 445778899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 116 ~n~~~ 120 (252)
T PRK07035 116 VNIRG 120 (252)
T ss_pred HhhHH
Confidence 99876
No 83
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.5e-11 Score=69.17 Aligned_cols=76 Identities=12% Similarity=0.125 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceecC
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+..++..+++... +.++..+++|+++++++.++++.+.+.++++|++|||||... +..+.+.++|++.+++|+.++
T Consensus 47 ~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~ 124 (257)
T PRK12744 47 ADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSA 124 (257)
T ss_pred HHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHH
Confidence 3444455555443 446888999999999999999999998899999999999754 345778899999999998763
No 84
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.4e-11 Score=69.44 Aligned_cols=77 Identities=21% Similarity=0.186 Sum_probs=62.3
Q ss_pred chhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcccee
Q psy13141 5 DLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~ 82 (84)
+.+.++.+...+... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.+.|++.+++|+.
T Consensus 43 ~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (258)
T PRK09134 43 SRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLR 120 (258)
T ss_pred CHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhH
Confidence 344555566666544 456888999999999999999999988899999999999765 3557788999999999987
Q ss_pred c
Q psy13141 83 E 83 (84)
Q Consensus 83 ~ 83 (84)
+
T Consensus 121 ~ 121 (258)
T PRK09134 121 A 121 (258)
T ss_pred H
Confidence 5
No 85
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.31 E-value=1.1e-11 Score=69.95 Aligned_cols=77 Identities=18% Similarity=0.211 Sum_probs=59.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhh----hh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDG----LQ 74 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~----~~ 74 (84)
++|+.+.++++.+.+ +.++..+++|+++++++..+++.+.+.++++|++|||+|+.. ++.+.+.++ |+
T Consensus 36 ~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (263)
T PRK06200 36 LERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFD 110 (263)
T ss_pred EeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHH
Confidence 456666655554443 335778899999999999999999999999999999999753 333455444 88
Q ss_pred hhhccceec
Q psy13141 75 LGMQIDQSE 83 (84)
Q Consensus 75 ~~~~~n~~~ 83 (84)
+++++|+.+
T Consensus 111 ~~~~~n~~~ 119 (263)
T PRK06200 111 EIFNVNVKG 119 (263)
T ss_pred HHeeeccHh
Confidence 999999876
No 86
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1e-11 Score=70.71 Aligned_cols=74 Identities=16% Similarity=0.213 Sum_probs=59.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccce
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~ 81 (84)
++|+.+.++++.+++... +.++.++++|+++++++.++++.+ +.++++|++|||||... ..+.|++++++|+
T Consensus 30 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~~-----~~~~~~~~~~vN~ 101 (275)
T PRK06940 30 ADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGPVTGLVHTAGVSP-----SQASPEAILKVDL 101 (275)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEECCCcCC-----chhhHHHHHHHhh
Confidence 467777777777777654 457888999999999999999988 45789999999999753 2357899999998
Q ss_pred ec
Q psy13141 82 SE 83 (84)
Q Consensus 82 ~~ 83 (84)
.+
T Consensus 102 ~g 103 (275)
T PRK06940 102 YG 103 (275)
T ss_pred HH
Confidence 76
No 87
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.31 E-value=9e-12 Score=70.16 Aligned_cols=80 Identities=18% Similarity=0.123 Sum_probs=62.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC--c-ccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI--L-NRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~-~~~~~~~~~~~~~ 78 (84)
++|+.+.++++.+++... + ++..+.+|+++++++.++++.+.+.++++|++|||+|.... . ...+.+.|+..++
T Consensus 32 ~~r~~~~~~~~~~~~~~~--~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 108 (257)
T PRK07024 32 VARRTDALQAFAARLPKA--A-RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMD 108 (257)
T ss_pred EeCCHHHHHHHHHhcccC--C-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHh
Confidence 466766666665555432 2 68889999999999999999999999999999999997652 2 2367789999999
Q ss_pred cceecC
Q psy13141 79 IDQSEV 84 (84)
Q Consensus 79 ~n~~~~ 84 (84)
+|+.|+
T Consensus 109 ~n~~g~ 114 (257)
T PRK07024 109 TNYFGM 114 (257)
T ss_pred HhcHHH
Confidence 998763
No 88
>PRK06196 oxidoreductase; Provisional
Probab=99.31 E-value=8.4e-12 Score=72.22 Aligned_cols=76 Identities=34% Similarity=0.401 Sum_probs=61.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccce
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~ 81 (84)
++|+.+.+++..+++. .+..+.+|+++.++++++++.+.+.++++|++|||||...+....+.++|+..+++|+
T Consensus 56 ~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~ 129 (315)
T PRK06196 56 PARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNH 129 (315)
T ss_pred EeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhh
Confidence 4677666666555542 2677899999999999999999998899999999999865444566788999999998
Q ss_pred ec
Q psy13141 82 SE 83 (84)
Q Consensus 82 ~~ 83 (84)
.|
T Consensus 130 ~g 131 (315)
T PRK06196 130 LG 131 (315)
T ss_pred HH
Confidence 76
No 89
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1.4e-11 Score=69.75 Aligned_cols=80 Identities=21% Similarity=0.194 Sum_probs=64.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+.+...++... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.+.|.+.+++
T Consensus 39 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T PRK07576 39 ASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDI 116 (264)
T ss_pred EeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 467777666666666554 345778899999999999999999988899999999998654 4557788899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 117 n~~g 120 (264)
T PRK07576 117 DLLG 120 (264)
T ss_pred HhHH
Confidence 9876
No 90
>PRK07985 oxidoreductase; Provisional
Probab=99.31 E-value=1.6e-11 Score=70.54 Aligned_cols=76 Identities=16% Similarity=0.154 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhccceec
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+++.+.+... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+.+
T Consensus 86 ~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g 163 (294)
T PRK07985 86 EDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFA 163 (294)
T ss_pred hhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHH
Confidence 3444555444433 456788999999999999999999999999999999999743 45578889999999999876
Q ss_pred C
Q psy13141 84 V 84 (84)
Q Consensus 84 ~ 84 (84)
+
T Consensus 164 ~ 164 (294)
T PRK07985 164 L 164 (294)
T ss_pred H
Confidence 3
No 91
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.30 E-value=1.8e-11 Score=68.85 Aligned_cols=80 Identities=16% Similarity=0.152 Sum_probs=66.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+++..++..+.+.+. +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... +..+.+.+.|+..+++
T Consensus 37 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T PRK13394 37 ADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAI 114 (262)
T ss_pred EeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHh
Confidence 467777777777777654 556888999999999999999999888899999999999865 3446678889999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 115 n~~~ 118 (262)
T PRK13394 115 HVDG 118 (262)
T ss_pred hhhh
Confidence 9876
No 92
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.30 E-value=2.1e-11 Score=68.54 Aligned_cols=81 Identities=20% Similarity=0.243 Sum_probs=65.3
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC-cccCChhhhhhhhccc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI-LNRITKDGLQLGMQID 80 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n 80 (84)
++|+.+..+.+..++... +.++..+.+|+++.+++.+++..+.+.++++|++|||+|...+ ..+.+.++|++.+++|
T Consensus 41 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n 118 (255)
T PRK06113 41 SDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELN 118 (255)
T ss_pred EeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHh
Confidence 456666677666666554 4568888999999999999999999989999999999997652 2367789999999999
Q ss_pred eecC
Q psy13141 81 QSEV 84 (84)
Q Consensus 81 ~~~~ 84 (84)
+.++
T Consensus 119 ~~~~ 122 (255)
T PRK06113 119 VFSF 122 (255)
T ss_pred hhhH
Confidence 8763
No 93
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.30 E-value=1.8e-11 Score=68.37 Aligned_cols=77 Identities=16% Similarity=0.221 Sum_probs=61.5
Q ss_pred chhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcccee
Q psy13141 5 DLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~ 82 (84)
+.....+..+++... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+.
T Consensus 37 ~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 114 (246)
T PRK12938 37 NSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLT 114 (246)
T ss_pred ChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 344444445555443 556788899999999999999999999999999999999865 3557788999999999987
Q ss_pred c
Q psy13141 83 E 83 (84)
Q Consensus 83 ~ 83 (84)
+
T Consensus 115 ~ 115 (246)
T PRK12938 115 S 115 (246)
T ss_pred H
Confidence 5
No 94
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.5e-11 Score=69.83 Aligned_cols=81 Identities=20% Similarity=0.247 Sum_probs=65.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++..+++.... +..+..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.++|+..+++
T Consensus 30 ~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 108 (272)
T PRK07832 30 TDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDV 108 (272)
T ss_pred EeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 4677777777777776542 223456789999999999999999998999999999999754 4557888999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 109 n~~~ 112 (272)
T PRK07832 109 NLMG 112 (272)
T ss_pred HhHH
Confidence 9875
No 95
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.30 E-value=1.8e-11 Score=69.00 Aligned_cols=76 Identities=20% Similarity=0.214 Sum_probs=61.9
Q ss_pred hhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 6 LGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+....+.+++... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.+.|++.+++|+.+
T Consensus 42 ~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~ 119 (261)
T PRK08936 42 EEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTG 119 (261)
T ss_pred HHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 34455566666554 556888999999999999999999999999999999999765 35577889999999999765
No 96
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.30 E-value=1.8e-11 Score=68.21 Aligned_cols=80 Identities=21% Similarity=0.253 Sum_probs=65.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++...++... +.++..+.+|+++++++..+++.+.+.++++|++|||+|... ++.+.+.+.|++.+++
T Consensus 37 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 114 (239)
T PRK07666 37 LARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQV 114 (239)
T ss_pred EeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHH
Confidence 467777777776666543 557888999999999999999999999999999999999754 3456788899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 115 n~~~ 118 (239)
T PRK07666 115 NLMG 118 (239)
T ss_pred HhHH
Confidence 9865
No 97
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.29 E-value=2.2e-11 Score=68.11 Aligned_cols=79 Identities=18% Similarity=0.175 Sum_probs=63.8
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhcc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQI 79 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~ 79 (84)
.|+.+.++.+...+... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.++|+..+++
T Consensus 34 ~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~ 111 (248)
T PRK06947 34 ARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDT 111 (248)
T ss_pred CCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHh
Confidence 35556666666666543 456889999999999999999999888899999999999764 3456788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 112 n~~~ 115 (248)
T PRK06947 112 NVLG 115 (248)
T ss_pred ccHH
Confidence 9875
No 98
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.29 E-value=2.4e-11 Score=67.96 Aligned_cols=78 Identities=13% Similarity=0.291 Sum_probs=63.4
Q ss_pred cchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC--cccCChhhhhhhhccce
Q psy13141 4 RDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI--LNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 4 r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~n~ 81 (84)
|+.+..++..+++... +.++.++.+|+++++++.++++.+.+.++++|++|||+|.... +.+.+.+.+++.+++|+
T Consensus 39 ~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 116 (247)
T PRK12935 39 SSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNL 116 (247)
T ss_pred CcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence 3445556666666544 4578899999999999999999999999999999999998653 44677899999999998
Q ss_pred ec
Q psy13141 82 SE 83 (84)
Q Consensus 82 ~~ 83 (84)
.+
T Consensus 117 ~~ 118 (247)
T PRK12935 117 SS 118 (247)
T ss_pred HH
Confidence 75
No 99
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.28 E-value=2.1e-11 Score=68.65 Aligned_cols=80 Identities=15% Similarity=0.191 Sum_probs=64.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++.....+... +.++..+.+|++++++++++++.+.+.++++|++|||+|... +..+.+.+.|++.+++
T Consensus 42 ~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 119 (259)
T PRK08213 42 SARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNL 119 (259)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhH
Confidence 456666666666666544 456788999999999999999999998899999999999754 3456778899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 120 n~~~ 123 (259)
T PRK08213 120 NVRG 123 (259)
T ss_pred HhHH
Confidence 9865
No 100
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.28 E-value=3.6e-11 Score=67.05 Aligned_cols=75 Identities=16% Similarity=0.183 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
...+++.+++... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++++++|+.+
T Consensus 41 ~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 117 (245)
T PRK12937 41 AAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRG 117 (245)
T ss_pred HHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchH
Confidence 3445555566544 567889999999999999999999999999999999999765 35577888999999999875
No 101
>KOG1199|consensus
Probab=99.28 E-value=1.1e-11 Score=66.46 Aligned_cols=63 Identities=19% Similarity=0.191 Sum_probs=55.2
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC-----c---ccCChhhhhhhhccceecC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI-----L---NRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-----~---~~~~~~~~~~~~~~n~~~~ 84 (84)
+.++.+...|++++.+++..+...+.+||++|.+|||||+... + ...+.+++++++++|+.|+
T Consensus 54 g~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gt 124 (260)
T KOG1199|consen 54 GGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGT 124 (260)
T ss_pred CCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeee
Confidence 6678999999999999999999999999999999999998652 1 2467899999999999874
No 102
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.28 E-value=3e-11 Score=67.53 Aligned_cols=78 Identities=19% Similarity=0.187 Sum_probs=62.3
Q ss_pred cchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhccc
Q psy13141 4 RDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQID 80 (84)
Q Consensus 4 r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n 80 (84)
|+.+..++..+.+... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|
T Consensus 35 ~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n 112 (248)
T PRK06123 35 RNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATN 112 (248)
T ss_pred CCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHH
Confidence 3444555555556543 446778999999999999999999999999999999999864 34567889999999999
Q ss_pred eec
Q psy13141 81 QSE 83 (84)
Q Consensus 81 ~~~ 83 (84)
+.+
T Consensus 113 ~~~ 115 (248)
T PRK06123 113 VVG 115 (248)
T ss_pred hHH
Confidence 876
No 103
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.28 E-value=1.9e-11 Score=70.21 Aligned_cols=80 Identities=21% Similarity=0.252 Sum_probs=64.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC--ccc--CChhhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI--LNR--ITKDGLQLGM 77 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~--~~~~~~~~~~ 77 (84)
++|+.+.++++.+++... +..+..+.+|+++.+++.++++.+.+.++++|++|||||.... ..+ .+.++++..+
T Consensus 70 ~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~ 147 (293)
T PRK05866 70 VARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTM 147 (293)
T ss_pred EECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHH
Confidence 578888888777777654 4567889999999999999999999999999999999997652 222 2347788899
Q ss_pred ccceec
Q psy13141 78 QIDQSE 83 (84)
Q Consensus 78 ~~n~~~ 83 (84)
++|+.|
T Consensus 148 ~vN~~g 153 (293)
T PRK05866 148 VLNYYA 153 (293)
T ss_pred HHHHHH
Confidence 999865
No 104
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.28 E-value=3.8e-11 Score=67.21 Aligned_cols=79 Identities=22% Similarity=0.273 Sum_probs=64.3
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+..++..+.+. . +.++..+.+|++++++++++++.+.+.++++|++|||+|... +....+.+++++.+++
T Consensus 35 ~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 111 (252)
T PRK06138 35 ADRDAEAAERVAAAIA-A--GGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRV 111 (252)
T ss_pred ecCCHHHHHHHHHHHh-c--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 4577666666666554 2 456889999999999999999999999999999999999765 3456778999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 112 n~~~ 115 (252)
T PRK06138 112 NVGG 115 (252)
T ss_pred hhhh
Confidence 9865
No 105
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.27 E-value=1.5e-11 Score=69.71 Aligned_cols=76 Identities=20% Similarity=0.104 Sum_probs=60.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++...+. .+..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.+.|++++++
T Consensus 35 ~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 108 (273)
T PRK07825 35 GDLDEALAKETAAELG------LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDV 108 (273)
T ss_pred EECCHHHHHHHHHHhc------cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHH
Confidence 3566666555444432 4677899999999999999999999999999999999865 4557788899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 109 n~~g 112 (273)
T PRK07825 109 NVYG 112 (273)
T ss_pred HHHH
Confidence 9865
No 106
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.27 E-value=2.8e-11 Score=68.12 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=61.4
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC---CCcccCChhhhhhhhcc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG---GILNRITKDGLQLGMQI 79 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~---~~~~~~~~~~~~~~~~~ 79 (84)
+|+. ...+..+++... +..+..+.+|+++.+++.++++.+.+.++++|++|||||.. .++.+.+.++|++.+++
T Consensus 39 ~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 115 (260)
T PRK12823 39 DRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRR 115 (260)
T ss_pred eCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHH
Confidence 4543 234455555443 45678899999999999999999999999999999999854 25667888999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 116 n~~~ 119 (260)
T PRK12823 116 SLFP 119 (260)
T ss_pred HhHH
Confidence 9865
No 107
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.27 E-value=3.4e-11 Score=67.75 Aligned_cols=78 Identities=19% Similarity=0.197 Sum_probs=62.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+.+ +..+..+.+|+++++++..+++.+.+.++++|++|||+|... ++.+.+.++|+..+++
T Consensus 36 ~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (257)
T PRK07067 36 ADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAV 110 (257)
T ss_pred EcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 356665555554443 235778899999999999999999999999999999999764 4557788999999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|+.++
T Consensus 111 n~~~~ 115 (257)
T PRK07067 111 NVKGL 115 (257)
T ss_pred hhhhH
Confidence 98763
No 108
>PRK05717 oxidoreductase; Validated
Probab=99.27 E-value=2e-11 Score=68.64 Aligned_cols=63 Identities=14% Similarity=0.163 Sum_probs=53.9
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhhccceecC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+..+..+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+.++
T Consensus 55 ~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 121 (255)
T PRK05717 55 GENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGP 121 (255)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHH
Confidence 345788899999999999999999999999999999999764 234678899999999998763
No 109
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.27 E-value=3.1e-11 Score=67.42 Aligned_cols=80 Identities=18% Similarity=0.133 Sum_probs=65.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+....++++.. +.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.+.|++.+++
T Consensus 37 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 114 (250)
T PRK12939 37 NDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNV 114 (250)
T ss_pred EeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 357777777777777654 456888999999999999999999998899999999999765 3456778899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 115 n~~~ 118 (250)
T PRK12939 115 NVRG 118 (250)
T ss_pred hhHH
Confidence 9865
No 110
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.27 E-value=2.7e-11 Score=67.72 Aligned_cols=77 Identities=13% Similarity=0.204 Sum_probs=60.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++..+++ +.++..+++|+++.+++..+++.+.+.++++|++|||+|... ++.+.+.+.|++.+++
T Consensus 36 ~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (249)
T PRK06500 36 TGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNT 110 (249)
T ss_pred ecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 356555544444333 446778899999999999999999999999999999999765 3457788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 111 n~~~ 114 (249)
T PRK06500 111 NVKG 114 (249)
T ss_pred HhHH
Confidence 9875
No 111
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.26 E-value=5.3e-11 Score=66.77 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=66.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++....++... +.++..+.+|+++++++..+++.+.+.++.+|++|||+|... +..+.+.++++..+++
T Consensus 34 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~ 111 (258)
T PRK12429 34 ADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAI 111 (258)
T ss_pred EeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhh
Confidence 467777777777776654 557888999999999999999999999999999999999765 3456778889999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 112 n~~~ 115 (258)
T PRK12429 112 MLDG 115 (258)
T ss_pred cchh
Confidence 9875
No 112
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.25 E-value=4.4e-11 Score=67.45 Aligned_cols=79 Identities=15% Similarity=0.207 Sum_probs=61.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.. ..+...++... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.+.|++.+++
T Consensus 36 ~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 112 (263)
T PRK08226 36 LDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDI 112 (263)
T ss_pred ecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhh
Confidence 355543 33344444433 456788999999999999999999999999999999999754 4557778899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 113 n~~~ 116 (263)
T PRK08226 113 NIKG 116 (263)
T ss_pred hhHH
Confidence 9875
No 113
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.25 E-value=5e-11 Score=66.37 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=62.5
Q ss_pred hhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 6 LGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+.++...++++.. +.++..+.+|+++.+++.++++.+.+.++++|+++||+|... ++.+.+.++|+.++++|+.+
T Consensus 33 ~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 110 (239)
T TIGR01831 33 RSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDG 110 (239)
T ss_pred HHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHH
Confidence 45556666666654 456889999999999999999998888899999999999865 34567889999999999865
No 114
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.24 E-value=4.3e-11 Score=66.96 Aligned_cols=80 Identities=21% Similarity=0.238 Sum_probs=63.9
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-----CcccCChhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-----ILNRITKDGLQLG 76 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-----~~~~~~~~~~~~~ 76 (84)
++|+.+....+.+++... +..+..+.+|+++.+++..+++.+.+.++++|++|||+|... ++.+.+.+.|++.
T Consensus 36 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 113 (250)
T PRK07774 36 ADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKF 113 (250)
T ss_pred EeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHH
Confidence 456666666666666543 345778899999999999999999999999999999999753 3446778899999
Q ss_pred hccceec
Q psy13141 77 MQIDQSE 83 (84)
Q Consensus 77 ~~~n~~~ 83 (84)
+++|+.+
T Consensus 114 ~~~n~~~ 120 (250)
T PRK07774 114 MSVNLDG 120 (250)
T ss_pred HhhhhHH
Confidence 9999875
No 115
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.24 E-value=5.6e-11 Score=66.89 Aligned_cols=80 Identities=14% Similarity=0.197 Sum_probs=64.3
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.......++... +..+..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.+.|+..+++
T Consensus 37 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 114 (260)
T PRK06198 37 CGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAV 114 (260)
T ss_pred EcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 456666666666666443 557888899999999999999999988899999999999765 3446788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 115 n~~~ 118 (260)
T PRK06198 115 NVRA 118 (260)
T ss_pred hhHH
Confidence 9865
No 116
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.24 E-value=4.9e-11 Score=67.21 Aligned_cols=78 Identities=23% Similarity=0.329 Sum_probs=62.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+++..+++.... +.++..+.+|+++++++..+++. ++++|++|||+|... ++.+.+.++|++++++
T Consensus 37 ~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~----~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 111 (259)
T PRK06125 37 VARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE----AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWEL 111 (259)
T ss_pred EeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4677777777777776553 45678899999999998887653 578999999999764 4567889999999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|+.++
T Consensus 112 n~~~~ 116 (259)
T PRK06125 112 KVFGY 116 (259)
T ss_pred hhHHH
Confidence 98763
No 117
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.24 E-value=1.8e-11 Score=70.78 Aligned_cols=82 Identities=16% Similarity=0.123 Sum_probs=60.3
Q ss_pred ccchhhHHHHHHHHHhh-------cCCc----eeEEEEeec--CC------------------HHHHHHHHHHHHhhcCC
Q psy13141 3 CRDLGKANGVRESIITK-------TNNH----QVVVKKLDL--AS------------------LDSVREFAAQILDEEKH 51 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~-------~~~~----~~~~~~~D~--~~------------------~~~~~~~~~~~~~~~~~ 51 (84)
+|+.+.++++...+... .++. ....+.+|+ ++ +++++++++.+.+.+|+
T Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~ 120 (303)
T PLN02730 41 GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGS 120 (303)
T ss_pred EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCC
Confidence 45666777776666431 0111 145678888 33 34899999999999999
Q ss_pred cceEEEcccCC----CCcccCChhhhhhhhccceecC
Q psy13141 52 IHVLINNAGQG----GILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 52 id~lv~~ag~~----~~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+|++|||||.. .++.+.+.++|+++|++|+.++
T Consensus 121 iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~ 157 (303)
T PLN02730 121 IDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSF 157 (303)
T ss_pred CCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHH
Confidence 99999999753 2566888999999999998763
No 118
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.24 E-value=5.2e-11 Score=66.60 Aligned_cols=80 Identities=20% Similarity=0.123 Sum_probs=64.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+...++..++... +.++..+.+|+++.++++++++.+.+.++++|++|||+|... ++.+.+.++|++.+++
T Consensus 33 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (250)
T TIGR03206 33 FDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAI 110 (250)
T ss_pred ecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 356666666666666554 456888999999999999999999999999999999999754 3456778889999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 111 n~~~ 114 (250)
T TIGR03206 111 NLTG 114 (250)
T ss_pred HhHH
Confidence 9875
No 119
>PRK06182 short chain dehydrogenase; Validated
Probab=99.24 E-value=2.8e-11 Score=68.68 Aligned_cols=60 Identities=27% Similarity=0.383 Sum_probs=53.1
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+..+.+|+++++++..+++.+.+.++++|++|||+|... ++.+.+.++|+..+++|+.+
T Consensus 47 ~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 108 (273)
T PRK06182 47 GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFG 108 (273)
T ss_pred CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHH
Confidence 3678899999999999999999999999999999999765 45677889999999999865
No 120
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.24 E-value=3.8e-11 Score=68.24 Aligned_cols=76 Identities=16% Similarity=0.264 Sum_probs=60.2
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQID 80 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n 80 (84)
+|+.+.++.+.+.+ +..+..+++|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|
T Consensus 34 ~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 108 (275)
T PRK08263 34 ARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTN 108 (275)
T ss_pred ECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHh
Confidence 45555544443322 335778899999999999999999988899999999999865 45577889999999999
Q ss_pred eec
Q psy13141 81 QSE 83 (84)
Q Consensus 81 ~~~ 83 (84)
+.+
T Consensus 109 ~~~ 111 (275)
T PRK08263 109 FFG 111 (275)
T ss_pred hHH
Confidence 876
No 121
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.23 E-value=3.5e-11 Score=70.00 Aligned_cols=81 Identities=21% Similarity=0.308 Sum_probs=60.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcC--CcceEEEcccCCC----CcccCChhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEK--HIHVLINNAGQGG----ILNRITKDGLQL 75 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~lv~~ag~~~----~~~~~~~~~~~~ 75 (84)
++|+.++++++.++++..+++.++..+.+|+++ ++.+.++.+.+..+ ++|++|||||... ++.+.+.+++++
T Consensus 83 ~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~ 160 (320)
T PLN02780 83 VARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKN 160 (320)
T ss_pred EECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHH
Confidence 578999999998888876645578888999985 23334444444444 4669999999864 345778899999
Q ss_pred hhccceecC
Q psy13141 76 GMQIDQSEV 84 (84)
Q Consensus 76 ~~~~n~~~~ 84 (84)
.+++|+.|+
T Consensus 161 ~~~vN~~g~ 169 (320)
T PLN02780 161 LIKVNVEGT 169 (320)
T ss_pred HHHHhHHHH
Confidence 999998763
No 122
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.23 E-value=5.7e-11 Score=66.87 Aligned_cols=62 Identities=16% Similarity=0.163 Sum_probs=54.4
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+.+++.+.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+.+
T Consensus 66 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 129 (256)
T PRK12748 66 GVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRA 129 (256)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHH
Confidence 456888999999999999999999999999999999999754 45577888999999999875
No 123
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.23 E-value=8.1e-11 Score=66.07 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=60.9
Q ss_pred cchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhh----cC--CcceEEEcccCCC--CcccCChhhhhh
Q psy13141 4 RDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDE----EK--HIHVLINNAGQGG--ILNRITKDGLQL 75 (84)
Q Consensus 4 r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~----~~--~id~lv~~ag~~~--~~~~~~~~~~~~ 75 (84)
|+.+.+++...++... +..+..+.+|+++.+++..+++.+.+. ++ ++|++|||||... +..+.+.+.|++
T Consensus 37 ~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~ 114 (252)
T PRK12747 37 NRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDR 114 (252)
T ss_pred CCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHH
Confidence 4556666666666554 456778899999999999999887653 33 8999999999754 355778899999
Q ss_pred hhccceecC
Q psy13141 76 GMQIDQSEV 84 (84)
Q Consensus 76 ~~~~n~~~~ 84 (84)
++++|+.++
T Consensus 115 ~~~vN~~~~ 123 (252)
T PRK12747 115 MVSVNAKAP 123 (252)
T ss_pred HHHHhhhHH
Confidence 999998763
No 124
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.23 E-value=5.2e-11 Score=67.25 Aligned_cols=78 Identities=22% Similarity=0.195 Sum_probs=57.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCCh----hhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITK----DGLQ 74 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~----~~~~ 74 (84)
++|+.+.++++.+ .. +.++..+.+|+++.+++.++++.+.+.++++|++|||||... ++.+.+. ++|+
T Consensus 35 ~~r~~~~~~~l~~----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 109 (262)
T TIGR03325 35 LDKSAAGLQELEA----AH-GDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFD 109 (262)
T ss_pred EeCCHHHHHHHHh----hc-CCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHH
Confidence 3566555544432 22 345788899999999999999999999999999999999753 2333332 5799
Q ss_pred hhhccceecC
Q psy13141 75 LGMQIDQSEV 84 (84)
Q Consensus 75 ~~~~~n~~~~ 84 (84)
+.+++|+.++
T Consensus 110 ~~~~~N~~~~ 119 (262)
T TIGR03325 110 EVFHINVKGY 119 (262)
T ss_pred HhheeecHhH
Confidence 9999998763
No 125
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.23 E-value=6.2e-11 Score=66.32 Aligned_cols=71 Identities=15% Similarity=0.288 Sum_probs=57.9
Q ss_pred HHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 11 GVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+.+... +.++..+.+|+++++++..+++.+.+.++++|++|||+|... ++.+.+.+.|++.+++|+.+
T Consensus 42 ~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (248)
T TIGR01832 42 ETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKS 114 (248)
T ss_pred HHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHH
Confidence 344444433 446888999999999999999999988899999999999865 34567788999999999875
No 126
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.22 E-value=6e-11 Score=66.85 Aligned_cols=78 Identities=14% Similarity=0.075 Sum_probs=61.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhh-cCCcceEEEcccCCC--CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDE-EKHIHVLINNAGQGG--ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~ 78 (84)
++|+.+.++++...+. +.++..+++|+++.+++.+++..+.+. ++++|++|||+|... ++...+.++++++++
T Consensus 31 ~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~ 106 (260)
T PRK08267 31 YDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVID 106 (260)
T ss_pred EeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 3566666665555443 346888999999999999999888776 789999999999865 355677899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 107 ~n~~~ 111 (260)
T PRK08267 107 INVKG 111 (260)
T ss_pred HHhHH
Confidence 99875
No 127
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.22 E-value=6.1e-11 Score=66.51 Aligned_cols=77 Identities=17% Similarity=0.307 Sum_probs=61.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+.++.+...+ +.++..+.+|+++.+++..+++.+.+.++++|++|||+|... +..+.+.++|++.++
T Consensus 30 ~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T PRK10538 30 TGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMID 104 (248)
T ss_pred EECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 356665555544433 345788899999999999999999998899999999999753 445678899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.|
T Consensus 105 ~n~~~ 109 (248)
T PRK10538 105 TNNKG 109 (248)
T ss_pred HhhHH
Confidence 99876
No 128
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.22 E-value=1.1e-10 Score=65.14 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=63.3
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhcc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQI 79 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~ 79 (84)
.|+.+..++...++... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.++|+..+++
T Consensus 33 ~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T PRK09730 33 QQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLST 110 (247)
T ss_pred CCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhh
Confidence 45566666666666544 456888999999999999999999988999999999999753 3456778899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 111 n~~~ 114 (247)
T PRK09730 111 NVTG 114 (247)
T ss_pred hhHH
Confidence 9875
No 129
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.21 E-value=7.2e-11 Score=66.59 Aligned_cols=80 Identities=14% Similarity=0.220 Sum_probs=64.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccC-Chhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRI-TKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~-~~~~~~~~~~ 78 (84)
++|+....+++.+.+... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... +..+. +.+.+.+.++
T Consensus 31 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 108 (263)
T PRK06181 31 AARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMR 108 (263)
T ss_pred EeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHH
Confidence 456766666666666654 456888899999999999999999988899999999999765 34455 7888999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 109 ~N~~~ 113 (263)
T PRK06181 109 VNYLG 113 (263)
T ss_pred HhhHH
Confidence 99875
No 130
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.21 E-value=8e-11 Score=65.82 Aligned_cols=79 Identities=18% Similarity=0.233 Sum_probs=64.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+..+++...+.. +..+..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++.++
T Consensus 35 ~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 111 (251)
T PRK07231 35 TDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFA 111 (251)
T ss_pred EeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHh
Confidence 46777666666665543 345788999999999999999999888899999999999754 355778899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 112 ~n~~~ 116 (251)
T PRK07231 112 VNVKS 116 (251)
T ss_pred hhhHH
Confidence 99865
No 131
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.21 E-value=6.8e-11 Score=66.51 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=60.5
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC-cccCChhhhhhhhccc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI-LNRITKDGLQLGMQID 80 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~n 80 (84)
++|+.+.. +..+.+... +.++.++.+|+++++++..+++.+.+.++++|++|||+|.... ..+.+.++|++.+++|
T Consensus 37 ~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n 113 (258)
T PRK08628 37 FGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERN 113 (258)
T ss_pred EcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhh
Confidence 35555554 555566544 4568899999999999999999999999999999999997542 2233338899999999
Q ss_pred eec
Q psy13141 81 QSE 83 (84)
Q Consensus 81 ~~~ 83 (84)
+.+
T Consensus 114 ~~~ 116 (258)
T PRK08628 114 LIH 116 (258)
T ss_pred hHH
Confidence 865
No 132
>KOG1610|consensus
Probab=99.21 E-value=6.1e-11 Score=68.15 Aligned_cols=63 Identities=21% Similarity=0.239 Sum_probs=54.5
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcC--CcceEEEcccCCC---CcccCChhhhhhhhccceecC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEK--HIHVLINNAGQGG---ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+.+...++.|++++++++++.+.++++.+ .+..+|||||+.. +.+..+.++|++++++|++|+
T Consensus 75 s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~ 142 (322)
T KOG1610|consen 75 SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGT 142 (322)
T ss_pred CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhH
Confidence 45678889999999999999999998653 5999999999765 567889999999999999874
No 133
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.21 E-value=6.8e-11 Score=74.44 Aligned_cols=82 Identities=22% Similarity=0.234 Sum_probs=66.3
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++.+.+.+...+....+..+.+|+++++++.++++.+.+.+|++|++|||||... ++.+.+.++|+..+++
T Consensus 444 ~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~v 523 (676)
T TIGR02632 444 ADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDI 523 (676)
T ss_pred EeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 45777777777666665432345778899999999999999999999999999999999765 4557788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 524 N~~g 527 (676)
T TIGR02632 524 LATG 527 (676)
T ss_pred HHHH
Confidence 9765
No 134
>PRK06398 aldose dehydrogenase; Validated
Probab=99.21 E-value=4e-11 Score=67.67 Aligned_cols=61 Identities=18% Similarity=0.292 Sum_probs=53.7
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceecC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~ 84 (84)
.+..+++|+++++++.++++.+.+.++++|++|||||... ++.+.+.++|++.+++|+.|+
T Consensus 45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 107 (258)
T PRK06398 45 DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGI 107 (258)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHH
Confidence 3667899999999999999999999999999999999754 456788999999999998763
No 135
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1e-10 Score=66.50 Aligned_cols=80 Identities=26% Similarity=0.351 Sum_probs=63.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+.+....+... +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... +..+.+.+.|++.+++
T Consensus 40 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (274)
T PRK07775 40 GARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQI 117 (274)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHH
Confidence 356666666665555543 456888899999999999999999888899999999999765 3446778899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 118 n~~~ 121 (274)
T PRK07775 118 HLVG 121 (274)
T ss_pred hhHH
Confidence 9865
No 136
>PRK06720 hypothetical protein; Provisional
Probab=99.20 E-value=2.3e-10 Score=61.35 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=55.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+.++++.+++... +....++.+|+++.+++.++++.+.+.+|++|++|||||... ++.+.+.++ ++.++
T Consensus 46 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~~~~ 122 (169)
T PRK06720 46 TDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SNVLC 122 (169)
T ss_pred EECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hhcee
Confidence 456666666666777643 445777899999999999999999989999999999999765 233334344 44555
Q ss_pred cc
Q psy13141 79 ID 80 (84)
Q Consensus 79 ~n 80 (84)
+|
T Consensus 123 ~~ 124 (169)
T PRK06720 123 IN 124 (169)
T ss_pred cc
Confidence 54
No 137
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.19 E-value=7e-11 Score=67.26 Aligned_cols=62 Identities=19% Similarity=0.309 Sum_probs=53.8
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.+.|++++++|+.|
T Consensus 49 ~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 112 (277)
T PRK06180 49 PDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFG 112 (277)
T ss_pred CCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHH
Confidence 345778899999999999999999998999999999999865 45577889999999999875
No 138
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.19 E-value=1.4e-10 Score=64.83 Aligned_cols=80 Identities=18% Similarity=0.127 Sum_probs=63.3
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC--c---------ccCCh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI--L---------NRITK 70 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~---------~~~~~ 70 (84)
++|+..++++..+++... +.++..+++|+++.+++.++++.+.+.++++|++|||+|.... . .+.+.
T Consensus 35 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 112 (253)
T PRK08217 35 IDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSL 112 (253)
T ss_pred EeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCH
Confidence 456666667676666654 5578889999999999999999998888899999999996541 1 35567
Q ss_pred hhhhhhhccceec
Q psy13141 71 DGLQLGMQIDQSE 83 (84)
Q Consensus 71 ~~~~~~~~~n~~~ 83 (84)
+.|...+++|+.+
T Consensus 113 ~~~~~~~~~n~~~ 125 (253)
T PRK08217 113 EQFQSVIDVNLTG 125 (253)
T ss_pred HHHHHHHhhhhHH
Confidence 8899999999865
No 139
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.3e-10 Score=66.68 Aligned_cols=79 Identities=16% Similarity=0.190 Sum_probs=61.4
Q ss_pred ccch-hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 3 CRDL-GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 3 ~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
+|+. +.++.....+... +.++.++.+|+++.+++.++++.+.+.++++|++|||||... ++.+.+.++|.+.++
T Consensus 77 ~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~ 154 (290)
T PRK06701 77 YLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFK 154 (290)
T ss_pred eCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHh
Confidence 4443 2344444445433 456888999999999999999999998899999999999753 355778899999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 155 ~N~~~ 159 (290)
T PRK06701 155 TNIYS 159 (290)
T ss_pred hhhHH
Confidence 99875
No 140
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.2e-10 Score=65.83 Aligned_cols=78 Identities=19% Similarity=0.185 Sum_probs=63.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++..++. . +.++..+.+|+++++++..+++.+.+ ++++|++|||+|... ++.+.+.+++++.+++
T Consensus 35 ~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (263)
T PRK09072 35 VGRNAEKLEALAARLP-Y--PGRHRWVVADLTSEAGREAVLARARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLAL 110 (263)
T ss_pred EECCHHHHHHHHHHHh-c--CCceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhh
Confidence 4677777777766662 2 45688899999999999999998876 789999999999765 3557788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.|
T Consensus 111 n~~g 114 (263)
T PRK09072 111 NLTA 114 (263)
T ss_pred hhHH
Confidence 9875
No 141
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.19 E-value=1.1e-10 Score=66.47 Aligned_cols=81 Identities=19% Similarity=0.293 Sum_probs=63.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+.+.....+.++..+.+|+++++++.. ++.+.+.++++|++|||+|... ...+.+.+.+++.+++
T Consensus 33 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~ 111 (280)
T PRK06914 33 TMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFET 111 (280)
T ss_pred EeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHH
Confidence 457776666666655543223468889999999999999 8888888899999999999765 3456778899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 112 n~~~ 115 (280)
T PRK06914 112 NVFG 115 (280)
T ss_pred hhHH
Confidence 9765
No 142
>KOG1611|consensus
Probab=99.19 E-value=1.5e-10 Score=64.06 Aligned_cols=81 Identities=20% Similarity=0.205 Sum_probs=61.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhh--cCCcceEEEcccCCCCc---ccCChhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDE--EKHIHVLINNAGQGGIL---NRITKDGLQLG 76 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~id~lv~~ag~~~~~---~~~~~~~~~~~ 76 (84)
++|++++..+..+..... ..+++.+++|++..+++..+++++.+- ...+++++||||+..++ ...+++.|.++
T Consensus 35 t~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~ 112 (249)
T KOG1611|consen 35 TARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQ 112 (249)
T ss_pred ecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHH
Confidence 356666652222222222 678999999999999999999999987 45799999999987743 35668899999
Q ss_pred hccceecC
Q psy13141 77 MQIDQSEV 84 (84)
Q Consensus 77 ~~~n~~~~ 84 (84)
+++|..||
T Consensus 113 ~~tN~v~~ 120 (249)
T KOG1611|consen 113 YETNAVGP 120 (249)
T ss_pred hhhcchhH
Confidence 99998774
No 143
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.19 E-value=1.5e-10 Score=64.57 Aligned_cols=76 Identities=14% Similarity=0.307 Sum_probs=58.9
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQID 80 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n 80 (84)
+|+.+.+++....+ +.++..+.+|+++.+++.++++.+.+.++++|++|||+|... +....+.++|++.+++|
T Consensus 37 ~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 111 (245)
T PRK12936 37 GTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVN 111 (245)
T ss_pred cCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhc
Confidence 34444444443332 345778899999999999999999999999999999999865 34566778999999999
Q ss_pred eec
Q psy13141 81 QSE 83 (84)
Q Consensus 81 ~~~ 83 (84)
+.+
T Consensus 112 ~~~ 114 (245)
T PRK12936 112 LTA 114 (245)
T ss_pred cHH
Confidence 865
No 144
>KOG1209|consensus
Probab=99.18 E-value=1.3e-10 Score=64.14 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=60.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHh-hcCCcceEEEcccCCC--CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILD-EEKHIHVLINNAGQGG--ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~ 78 (84)
++|+.+.+.++... .++....+|+++++++..+..+++. ..|.+|+|+||||..= |..+.+.+..++.|+
T Consensus 38 taR~~e~M~~L~~~-------~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~ 110 (289)
T KOG1209|consen 38 TARRLEPMAQLAIQ-------FGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFK 110 (289)
T ss_pred EccccchHhhHHHh-------hCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhc
Confidence 34555555444322 2477889999999999999999988 7899999999999754 566888999999999
Q ss_pred cceecC
Q psy13141 79 IDQSEV 84 (84)
Q Consensus 79 ~n~~~~ 84 (84)
+|++|+
T Consensus 111 vNvfG~ 116 (289)
T KOG1209|consen 111 VNVFGH 116 (289)
T ss_pred cceeee
Confidence 999874
No 145
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.18 E-value=2.3e-10 Score=64.26 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=59.9
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhhccceec
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~ 83 (84)
...+..+.++.. +.++.++.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.+.|++.+++|+.+
T Consensus 39 ~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 116 (256)
T PRK12745 39 ELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRG 116 (256)
T ss_pred HHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchH
Confidence 444455555433 446888999999999999999999999999999999999754 24567789999999999876
Q ss_pred C
Q psy13141 84 V 84 (84)
Q Consensus 84 ~ 84 (84)
+
T Consensus 117 ~ 117 (256)
T PRK12745 117 P 117 (256)
T ss_pred H
Confidence 3
No 146
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.18 E-value=1.6e-10 Score=65.59 Aligned_cols=82 Identities=16% Similarity=0.174 Sum_probs=64.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+..+...+.+.....+.++..+.+|+++++++...++.+.+.++++|++|||+|... +..+.+.++|...++
T Consensus 37 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (276)
T PRK05875 37 VGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVD 116 (276)
T ss_pred EeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHH
Confidence 46666666666666554321246788899999999999999999999999999999999653 345677888999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 117 ~n~~~ 121 (276)
T PRK05875 117 LNVNG 121 (276)
T ss_pred HhhHH
Confidence 99765
No 147
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.17 E-value=2e-10 Score=64.45 Aligned_cols=79 Identities=24% Similarity=0.360 Sum_probs=62.3
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhc------CCcceEEEcccCCC--CcccCChhhhh
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEE------KHIHVLINNAGQGG--ILNRITKDGLQ 74 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~------~~id~lv~~ag~~~--~~~~~~~~~~~ 74 (84)
.|+.+.+++....+... +.++..+.+|+++++++.++++.+.+.+ +++|++|||+|... +..+.+.+.|+
T Consensus 38 ~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~ 115 (254)
T PRK12746 38 GRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFD 115 (254)
T ss_pred CCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHH
Confidence 56666666666666543 4468889999999999999999998876 47999999999765 34467788999
Q ss_pred hhhccceec
Q psy13141 75 LGMQIDQSE 83 (84)
Q Consensus 75 ~~~~~n~~~ 83 (84)
..+++|+.+
T Consensus 116 ~~~~~n~~~ 124 (254)
T PRK12746 116 EIMAVNIKA 124 (254)
T ss_pred HHHHHHhHH
Confidence 999999875
No 148
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.17 E-value=1.7e-10 Score=65.38 Aligned_cols=79 Identities=15% Similarity=0.081 Sum_probs=55.1
Q ss_pred cchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHH----HHHHHHHHhhcCCcceEEEcccCCC--CcccCCh-------
Q psy13141 4 RDLGKANGVRESIITKTNNHQVVVKKLDLASLDSV----REFAAQILDEEKHIHVLINNAGQGG--ILNRITK------- 70 (84)
Q Consensus 4 r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~----~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~------- 70 (84)
|+.+.++.+.+++.... +.++..+.+|+++.+++ +++++.+.+.++++|++|||||... ++.+.+.
T Consensus 34 ~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~ 112 (267)
T TIGR02685 34 RSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDK 112 (267)
T ss_pred CcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccc
Confidence 34566666666665433 34577789999999865 5566666677899999999999754 2222222
Q ss_pred ----hhhhhhhccceec
Q psy13141 71 ----DGLQLGMQIDQSE 83 (84)
Q Consensus 71 ----~~~~~~~~~n~~~ 83 (84)
++|.+++++|+.+
T Consensus 113 ~~~~~~~~~~~~~N~~~ 129 (267)
T TIGR02685 113 KSLEVQVAELFGSNAIA 129 (267)
T ss_pred hhhHHHHHHHHHhhhHH
Confidence 3588999999865
No 149
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.16 E-value=1.6e-10 Score=65.70 Aligned_cols=61 Identities=18% Similarity=0.291 Sum_probs=52.5
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.++..+++|+++.+++.++++.+.+.++++|++|||+|... +..+.+.+.+++.+++|+.+
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 110 (276)
T PRK06482 48 DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIG 110 (276)
T ss_pred CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHH
Confidence 35788899999999999999999888899999999999865 34466788899999999875
No 150
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1.5e-10 Score=65.80 Aligned_cols=59 Identities=22% Similarity=0.275 Sum_probs=51.9
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+.+|+++.+++.++++.+.+.++++|++|||+|... +..+.+.++|++.+++|+.|
T Consensus 46 ~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g 106 (274)
T PRK05693 46 FTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFA 106 (274)
T ss_pred CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHH
Confidence 567889999999999999999988899999999999754 45577889999999999876
No 151
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.14 E-value=2.7e-10 Score=63.55 Aligned_cols=79 Identities=20% Similarity=0.316 Sum_probs=64.4
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQID 80 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n 80 (84)
+|+.+......+.+... +.++.++.+|+++++++.++++.+.+.++++|++||++|... +..+.+.+.|++.+++|
T Consensus 37 ~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 114 (247)
T PRK05565 37 DINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVN 114 (247)
T ss_pred CCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHh
Confidence 56666666666666553 456888999999999999999999888899999999999764 34467789999999999
Q ss_pred eec
Q psy13141 81 QSE 83 (84)
Q Consensus 81 ~~~ 83 (84)
+.+
T Consensus 115 ~~~ 117 (247)
T PRK05565 115 LTG 117 (247)
T ss_pred hHH
Confidence 865
No 152
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.14 E-value=2e-10 Score=63.98 Aligned_cols=60 Identities=17% Similarity=0.132 Sum_probs=51.8
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceecC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~~ 84 (84)
+..+.+|+++++++..+++.+.+.++++|++|||+|... ...+.+.++|++++++|+.++
T Consensus 48 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~ 109 (236)
T PRK06483 48 AQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAP 109 (236)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHH
Confidence 567899999999999999999999999999999999754 244667899999999998763
No 153
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.14 E-value=1.4e-10 Score=65.10 Aligned_cols=62 Identities=16% Similarity=0.230 Sum_probs=53.6
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+..+++|+++++++.++++.+.+.++++|++|||+|... +..+.+.+.|++++++|+.+
T Consensus 46 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 109 (252)
T PRK07856 46 GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLA 109 (252)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence 345778899999999999999999999999999999999764 34567889999999999875
No 154
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.14 E-value=4.1e-10 Score=62.52 Aligned_cols=74 Identities=14% Similarity=0.159 Sum_probs=59.4
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC------CcccCChhhhhhhhccce
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG------ILNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~n~ 81 (84)
++++-.+++.+.. .....++||+++.+++...+..+.+++|.+|++||+.|+.. .+.+++++.|...++|..
T Consensus 43 ~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~ 120 (259)
T COG0623 43 RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISA 120 (259)
T ss_pred HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhH
Confidence 4444444554442 23577899999999999999999999999999999999865 355789999999999887
Q ss_pred ec
Q psy13141 82 SE 83 (84)
Q Consensus 82 ~~ 83 (84)
++
T Consensus 121 YS 122 (259)
T COG0623 121 YS 122 (259)
T ss_pred hh
Confidence 65
No 155
>KOG1210|consensus
Probab=99.13 E-value=1.9e-10 Score=66.19 Aligned_cols=83 Identities=19% Similarity=0.201 Sum_probs=70.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.++++++++.++-...-..+.+..+|+++.+++...++.++...+.+|.++||||..- -+.+.+.+.++..+++
T Consensus 63 ~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~v 142 (331)
T KOG1210|consen 63 TARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDV 142 (331)
T ss_pred EeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHh
Confidence 57888999999998876542223668889999999999999999999999999999999765 4779999999999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|+.++
T Consensus 143 Nylgt 147 (331)
T KOG1210|consen 143 NYLGT 147 (331)
T ss_pred hhhhh
Confidence 98763
No 156
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.13 E-value=5.2e-10 Score=62.44 Aligned_cols=77 Identities=14% Similarity=0.217 Sum_probs=61.4
Q ss_pred chhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcccee
Q psy13141 5 DLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~ 82 (84)
+.+...++..++... +.++..+.+|+++.+++.+.++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+.
T Consensus 43 ~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (249)
T PRK12827 43 GRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLD 120 (249)
T ss_pred cHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhh
Confidence 344455555555443 456888999999999999999999988899999999999865 4557778899999999987
Q ss_pred c
Q psy13141 83 E 83 (84)
Q Consensus 83 ~ 83 (84)
+
T Consensus 121 ~ 121 (249)
T PRK12827 121 G 121 (249)
T ss_pred H
Confidence 5
No 157
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.13 E-value=2.9e-10 Score=63.42 Aligned_cols=82 Identities=20% Similarity=0.187 Sum_probs=63.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCC--HHHHHHHHHHHHhhc-CCcceEEEcccCCC---CcccCChhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLAS--LDSVREFAAQILDEE-KHIHVLINNAGQGG---ILNRITKDGLQL 75 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~-~~id~lv~~ag~~~---~~~~~~~~~~~~ 75 (84)
++|+.+.+++..+++.... +..+..+++|+++ .+++.++++.+.+.+ +++|++|||||... ++.+.+.++|.+
T Consensus 36 ~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~ 114 (239)
T PRK08703 36 VARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVN 114 (239)
T ss_pred EeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHH
Confidence 4677777777777765442 3356778899975 567888898888877 78999999999753 456788899999
Q ss_pred hhccceecC
Q psy13141 76 GMQIDQSEV 84 (84)
Q Consensus 76 ~~~~n~~~~ 84 (84)
.+++|+.|+
T Consensus 115 ~~~~n~~g~ 123 (239)
T PRK08703 115 QYRINTVAP 123 (239)
T ss_pred HHHHhhhHH
Confidence 999998763
No 158
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.13 E-value=3.9e-10 Score=63.00 Aligned_cols=80 Identities=10% Similarity=0.122 Sum_probs=64.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+......+... +.++..+.+|+++++++.++++.+...++++|++||++|... +....+.++++..+++
T Consensus 36 ~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 113 (251)
T PRK12826 36 VDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDV 113 (251)
T ss_pred EeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 457766666666666554 446888999999999999999999999999999999998765 3446778888988888
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 114 n~~~ 117 (251)
T PRK12826 114 NLTG 117 (251)
T ss_pred hhHH
Confidence 8765
No 159
>KOG1014|consensus
Probab=99.13 E-value=1.9e-10 Score=66.06 Aligned_cols=80 Identities=20% Similarity=0.257 Sum_probs=63.0
Q ss_pred CCccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhc--CCcceEEEcccCCC--C--cccCChhhhh
Q psy13141 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEE--KHIHVLINNAGQGG--I--LNRITKDGLQ 74 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~lv~~ag~~~--~--~~~~~~~~~~ 74 (84)
|++|++++++.+..++...+ +.++..+.+|+++.+. ..+.+.+.. ..+.+||||+|... | +.+.+.+.++
T Consensus 78 LIsRt~~KL~~v~kEI~~~~-~vev~~i~~Dft~~~~---~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~ 153 (312)
T KOG1014|consen 78 LISRTQEKLEAVAKEIEEKY-KVEVRIIAIDFTKGDE---VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQ 153 (312)
T ss_pred EEeCCHHHHHHHHHHHHHHh-CcEEEEEEEecCCCch---hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhh
Confidence 57999999999999999998 5789999999999876 233333332 36778999999877 2 3366667889
Q ss_pred hhhccceecC
Q psy13141 75 LGMQIDQSEV 84 (84)
Q Consensus 75 ~~~~~n~~~~ 84 (84)
+.+.+|+.++
T Consensus 154 ~ii~vN~~~~ 163 (312)
T KOG1014|consen 154 NIINVNILSV 163 (312)
T ss_pred heeEEecchH
Confidence 9999998763
No 160
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.12 E-value=2.6e-10 Score=71.35 Aligned_cols=80 Identities=20% Similarity=0.213 Sum_probs=64.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccC--Chhhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRI--TKDGLQLGM 77 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~--~~~~~~~~~ 77 (84)
++|+.+.++++.+++... +.++..+.+|+++.+++.++++.+.+.++++|++|||||... ..... +.+++++.+
T Consensus 401 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 478 (657)
T PRK07201 401 VARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTM 478 (657)
T ss_pred EECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHH
Confidence 467888888887777655 557888999999999999999999999999999999999754 22222 247899999
Q ss_pred ccceec
Q psy13141 78 QIDQSE 83 (84)
Q Consensus 78 ~~n~~~ 83 (84)
++|+.|
T Consensus 479 ~~N~~g 484 (657)
T PRK07201 479 AVNYFG 484 (657)
T ss_pred HHHHHH
Confidence 999875
No 161
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.12 E-value=1.6e-10 Score=65.04 Aligned_cols=60 Identities=22% Similarity=0.251 Sum_probs=53.2
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+.+
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 113 (255)
T PRK06463 52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNG 113 (255)
T ss_pred CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHH
Confidence 3677899999999999999999999999999999999864 45577889999999999876
No 162
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.12 E-value=2.2e-10 Score=65.24 Aligned_cols=60 Identities=20% Similarity=0.323 Sum_probs=51.0
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhc-CCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEE-KHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+..+.+|+++.+++..+++.+.+.+ +++|++|||||... ++.+.+.++|+..+++|+.|
T Consensus 48 ~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g 110 (277)
T PRK05993 48 GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFG 110 (277)
T ss_pred CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHH
Confidence 36678999999999999999987655 68999999999765 45577889999999999876
No 163
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.12 E-value=4.9e-10 Score=62.37 Aligned_cols=77 Identities=19% Similarity=0.211 Sum_probs=60.0
Q ss_pred chhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcccee
Q psy13141 5 DLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~ 82 (84)
+.+..++...++... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.+.|++.+.+|+.
T Consensus 34 ~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 111 (242)
T TIGR01829 34 NEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLN 111 (242)
T ss_pred CHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 444445444444433 456888999999999999999999998899999999999765 3456778899999999876
Q ss_pred c
Q psy13141 83 E 83 (84)
Q Consensus 83 ~ 83 (84)
+
T Consensus 112 ~ 112 (242)
T TIGR01829 112 S 112 (242)
T ss_pred H
Confidence 5
No 164
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.11 E-value=4.9e-10 Score=62.77 Aligned_cols=81 Identities=21% Similarity=0.215 Sum_probs=62.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecC--CHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLA--SLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLG 76 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~ 76 (84)
++|+.+.++++..++.... ..++..+.+|+. +.+++.++++.+.+.++++|++|||||... ++.+.+.+.|++.
T Consensus 42 ~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~ 120 (247)
T PRK08945 42 LGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDV 120 (247)
T ss_pred EeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHH
Confidence 4677777777767766542 335666677775 789999999999998999999999999754 3457778999999
Q ss_pred hccceec
Q psy13141 77 MQIDQSE 83 (84)
Q Consensus 77 ~~~n~~~ 83 (84)
+++|+.+
T Consensus 121 ~~~n~~g 127 (247)
T PRK08945 121 MQVNVNA 127 (247)
T ss_pred HHHccHH
Confidence 9999875
No 165
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.11 E-value=3.4e-10 Score=63.86 Aligned_cols=80 Identities=14% Similarity=0.038 Sum_probs=59.9
Q ss_pred Cccchhh-HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcc--cCChhhhhhhhc
Q psy13141 2 ACRDLGK-ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILN--RITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~--~~~~~~~~~~~~ 78 (84)
++|+.+. ++++.+++.... +.+++++++|+++.+++.++++.+.+ .+++|++|||+|...+.. ..+.+...+.++
T Consensus 39 ~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 116 (253)
T PRK07904 39 AALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAE 116 (253)
T ss_pred EeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-cCCCCEEEEeeecCCchhhcccCHHHHHHHHH
Confidence 4677765 777777776642 33688999999999999999998886 489999999999865322 223445557789
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 117 vN~~~ 121 (253)
T PRK07904 117 INYTA 121 (253)
T ss_pred HHhHh
Confidence 99875
No 166
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.11 E-value=5e-10 Score=62.44 Aligned_cols=62 Identities=26% Similarity=0.409 Sum_probs=54.3
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+.++.++.+|+++.+++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+.+
T Consensus 51 ~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (245)
T PRK12824 51 EDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNS 114 (245)
T ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHH
Confidence 346888999999999999999999999999999999999865 35577889999999999875
No 167
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.10 E-value=2e-10 Score=62.06 Aligned_cols=73 Identities=16% Similarity=0.124 Sum_probs=49.8
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcccee
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~ 82 (84)
...+..++++.. +.++.++++|+++++++.+++..+.+.+++++++||++|... ++.+.+.++++.++...+.
T Consensus 40 ~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~ 114 (181)
T PF08659_consen 40 EAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVR 114 (181)
T ss_dssp THHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhh
Confidence 344567777766 778999999999999999999999999999999999999876 4668888888888765443
No 168
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.09 E-value=7e-10 Score=61.67 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=63.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.+.++.+.+... .+++.+.+|+.+.+++..+++.+.+.++++|++||++|... ++.+.+.+.+.+.+++
T Consensus 36 ~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 112 (237)
T PRK07326 36 TARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDT 112 (237)
T ss_pred eeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhh
Confidence 467777766666666532 35788999999999999999999998899999999998764 3456788889999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 113 n~~~ 116 (237)
T PRK07326 113 NLTG 116 (237)
T ss_pred ccHH
Confidence 8765
No 169
>KOG1478|consensus
Probab=99.09 E-value=6.9e-10 Score=62.67 Aligned_cols=84 Identities=20% Similarity=0.265 Sum_probs=71.6
Q ss_pred CCccchhhHHHHHHHHHhhcC--CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-C-------------
Q psy13141 1 MACRDLGKANGVRESIITKTN--NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-I------------- 64 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-~------------- 64 (84)
+++|+.++.+++.+.+..-+| ..++.++.+|+++..++.++...++.++.++|.+.-|||.+. +
T Consensus 37 ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fs 116 (341)
T KOG1478|consen 37 LTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFS 116 (341)
T ss_pred EEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhh
Confidence 478999999999999999988 456888999999999999999999999999999999999743 1
Q ss_pred --c-------------ccCChhhhhhhhccceecC
Q psy13141 65 --L-------------NRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 65 --~-------------~~~~~~~~~~~~~~n~~~~ 84 (84)
. -..+.+++...|+.|++|+
T Consensus 117 npv~amt~pt~~~~t~G~is~D~lg~iFetnVFGh 151 (341)
T KOG1478|consen 117 NPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGH 151 (341)
T ss_pred chhHHhcCchhhhhhcceecccchhhHhhhcccch
Confidence 0 0345678888999999875
No 170
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.09 E-value=7.2e-10 Score=62.11 Aligned_cols=80 Identities=15% Similarity=0.136 Sum_probs=62.9
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+..+.+...+... +.++..+.+|+++++++..+++.+.+..+++|++||++|... +..+.+.+++++++++
T Consensus 31 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~ 108 (255)
T TIGR01963 31 NDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAI 108 (255)
T ss_pred EeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 466666666666666543 456888999999999999999999988889999999999765 2345677888888888
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 109 n~~g 112 (255)
T TIGR01963 109 MLTS 112 (255)
T ss_pred HhHH
Confidence 8764
No 171
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.09 E-value=7.3e-10 Score=61.65 Aligned_cols=80 Identities=15% Similarity=0.248 Sum_probs=63.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+..+.....+... +.++..+.+|+++++++.++++.+...++++|++||++|... +..+.+.+.|.+.+++
T Consensus 35 ~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 112 (246)
T PRK05653 35 YDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDV 112 (246)
T ss_pred EeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 467776666666666544 556888899999999999999999888899999999999765 3446778888888888
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 113 n~~~ 116 (246)
T PRK05653 113 NLTG 116 (246)
T ss_pred hhHH
Confidence 8764
No 172
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.07 E-value=3.6e-10 Score=64.01 Aligned_cols=60 Identities=23% Similarity=0.242 Sum_probs=53.1
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+++++.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.+++++++++|+.|
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 107 (270)
T PRK06179 46 GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFG 107 (270)
T ss_pred CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHH
Confidence 4678899999999999999999999999999999999865 45577889999999999865
No 173
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.06 E-value=1.2e-09 Score=61.24 Aligned_cols=61 Identities=16% Similarity=0.158 Sum_probs=51.8
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCC-cceEEEcccCCC--------CcccCChhhhhhhhccceec
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKH-IHVLINNAGQGG--------ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-id~lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~~ 83 (84)
.++.++.+|+++++++..+++.+.+.++. +|++|||+|... ++.+.+.++|++.+++|+.+
T Consensus 52 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (253)
T PRK08642 52 DRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKG 121 (253)
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhH
Confidence 46788899999999999999999888887 999999998632 24467789999999999875
No 174
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.06 E-value=1.6e-09 Score=60.66 Aligned_cols=74 Identities=15% Similarity=0.176 Sum_probs=57.7
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
........+... +.++..+.+|+++++++.++++.+.+.++++|++|||+|... +..+.+.+.|++.+++|+.+
T Consensus 43 ~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (252)
T PRK06077 43 EMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKS 118 (252)
T ss_pred HHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHH
Confidence 333344444433 446778899999999999999999999999999999999754 34466778889999999875
No 175
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.06 E-value=1.1e-09 Score=60.74 Aligned_cols=75 Identities=20% Similarity=0.273 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+.++.....+... +.+++.+.+|++++++++++++.+.+.++++|++||++|... ++.+.+.+.+++.+++|+.+
T Consensus 34 ~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 110 (239)
T TIGR01830 34 EGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTG 110 (239)
T ss_pred hHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 4444555555544 456888999999999999999999988899999999999765 34466778899999988765
No 176
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.06 E-value=9.8e-10 Score=61.72 Aligned_cols=61 Identities=16% Similarity=0.202 Sum_probs=52.9
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
..+..+.+|+++++++.++++.+.+.++++|++|||+|... ++.+.+.++|++.+++|+.+
T Consensus 61 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 123 (255)
T PRK06841 61 GNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKG 123 (255)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHH
Confidence 35668899999999999999999998899999999999765 34567789999999999875
No 177
>KOG1207|consensus
Probab=99.05 E-value=7.3e-11 Score=63.35 Aligned_cols=74 Identities=16% Similarity=0.202 Sum_probs=56.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
.+|+++.+..+..+. ..-+..++.|++.-+.+.+.+. ..+++|++|||||+.. |+.+++.+.+++.|++
T Consensus 37 vaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~----~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~V 107 (245)
T KOG1207|consen 37 VARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLV----PVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAV 107 (245)
T ss_pred EecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhc----ccCchhhhhccchhhhcchHHHHhHHhhcceeee
Confidence 357776666665543 3348889999998666544443 3478999999999865 7889999999999999
Q ss_pred ceecC
Q psy13141 80 DQSEV 84 (84)
Q Consensus 80 n~~~~ 84 (84)
|+.++
T Consensus 108 Nvrav 112 (245)
T KOG1207|consen 108 NVRAV 112 (245)
T ss_pred eeeee
Confidence 98764
No 178
>PRK08324 short chain dehydrogenase; Validated
Probab=99.04 E-value=9.2e-10 Score=69.50 Aligned_cols=79 Identities=10% Similarity=0.096 Sum_probs=64.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++.+...+... ..+..+.+|+++++++.++++.+.+.+|++|++|||+|... ++.+.+.+.|+..+++
T Consensus 452 ~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~ 528 (681)
T PRK08324 452 ADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDV 528 (681)
T ss_pred EeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 467776666666655432 35788999999999999999999998999999999999765 4557788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.|
T Consensus 529 N~~g 532 (681)
T PRK08324 529 NATG 532 (681)
T ss_pred HhHH
Confidence 9875
No 179
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.3e-09 Score=61.31 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=61.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++.+.+.+. +.++..+.+|+.+.+++...++.+.+.++++|++|||+|... ++.+.+.+.|...+++
T Consensus 32 ~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 107 (257)
T PRK07074 32 LDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNAL 107 (257)
T ss_pred EeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3566666665555552 346788999999999999999999888899999999999865 3446778889988988
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 108 n~~~ 111 (257)
T PRK07074 108 NLEA 111 (257)
T ss_pred hhHH
Confidence 8764
No 180
>PRK09135 pteridine reductase; Provisional
Probab=99.04 E-value=2.4e-09 Score=59.77 Aligned_cols=77 Identities=17% Similarity=0.132 Sum_probs=59.6
Q ss_pred hhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 6 LGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+..+.+...+.... +..+..+.+|+++.+++..+++.+.+.++++|++|||+|... ++...+.++++..+++|+.|
T Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 119 (249)
T PRK09135 41 AAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKA 119 (249)
T ss_pred HHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchh
Confidence 344555555554432 335788899999999999999999999999999999999755 34456678899999999875
No 181
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.02 E-value=9.3e-10 Score=58.26 Aligned_cols=62 Identities=18% Similarity=0.155 Sum_probs=53.1
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+.++..+.+|+++++++.++++.+...++++|.++|++|... +....+.++|+..+++|+.+
T Consensus 52 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (180)
T smart00822 52 GAEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDG 115 (180)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHH
Confidence 456788899999999999999999888899999999999765 34567788999999999765
No 182
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.02 E-value=1.2e-09 Score=60.59 Aligned_cols=75 Identities=15% Similarity=0.121 Sum_probs=57.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++.....++. +.+++.+.+|+++++++..+++. .+++|++|||+|... ++.+.+.++|++++++
T Consensus 27 ~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK07041 27 ASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVITAADTPGGPVRALPLAAAQAAMDS 99 (230)
T ss_pred EeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 45666666655555542 34678889999999998887765 478999999999765 3556788999999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 100 n~~~ 103 (230)
T PRK07041 100 KFWG 103 (230)
T ss_pred HHHH
Confidence 9765
No 183
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.99 E-value=2.1e-09 Score=60.49 Aligned_cols=58 Identities=16% Similarity=0.174 Sum_probs=49.8
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhhccceec
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~ 83 (84)
..+++|++++++++++++.+.+.++++|++|||+|... ++.+.+.+.|++.+++|+.+
T Consensus 54 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (255)
T PRK06057 54 LFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTS 115 (255)
T ss_pred cEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHH
Confidence 56789999999999999999988899999999999753 23466778999999999875
No 184
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.99 E-value=3.4e-09 Score=59.05 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=58.1
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+....++... +.++..+.+|+++.+++.++++.+.+.++++|++||++|... +..+.+.+.+.+.+++|+.+
T Consensus 43 ~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 117 (248)
T PRK05557 43 AEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTG 117 (248)
T ss_pred HHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHH
Confidence 44455555443 456888899999999999999999988899999999999765 34467778899999888764
No 185
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.99 E-value=1.8e-09 Score=75.26 Aligned_cols=68 Identities=12% Similarity=0.036 Sum_probs=57.5
Q ss_pred HHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 13 RESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+.+... +.++.++.+|+++.+++.++++.+.+. +++|++|||||+.. .+.+.+.++|+++|++|+.|
T Consensus 2086 la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2086 LAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred HHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 3444433 667899999999999999999999877 68999999999865 46688999999999999876
No 186
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.99 E-value=1.8e-09 Score=60.54 Aligned_cols=60 Identities=23% Similarity=0.348 Sum_probs=53.9
Q ss_pred eeEEEEeecCC-HHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLAS-LDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+....+|+++ .++++.+++.+.+.+|++|++|||||... ++.+.+.++|++++++|+.+
T Consensus 58 ~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g 121 (251)
T COG1028 58 RAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121 (251)
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHH
Confidence 57788899998 99999999999999999999999999874 46688889999999999875
No 187
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.98 E-value=1.4e-09 Score=61.33 Aligned_cols=60 Identities=15% Similarity=0.225 Sum_probs=52.2
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+..+.+|+++++++.++++.+.+.++++|++|||||... ++.+.+.++|++.+++|+.+
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 113 (260)
T PRK06523 50 GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLA 113 (260)
T ss_pred ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHH
Confidence 4678899999999999999999999999999999999643 34567889999999999875
No 188
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.98 E-value=1.9e-09 Score=60.94 Aligned_cols=61 Identities=23% Similarity=0.261 Sum_probs=51.8
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCC-----------cccCChhhhhhhhccceecC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGI-----------LNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-----------~~~~~~~~~~~~~~~n~~~~ 84 (84)
.+..+.+|+++++++.++++.+.+.++++|++|||||...+ ..+.+.++|++++++|+.++
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~ 121 (266)
T PRK06171 50 NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGV 121 (266)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhH
Confidence 46678899999999999999999999999999999997532 12567899999999998763
No 189
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.96 E-value=4.9e-09 Score=58.40 Aligned_cols=74 Identities=18% Similarity=0.221 Sum_probs=57.4
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
..+.+...+... +.++..+.+|+++++++..+++.+.+.++.+|++||++|... ++.+.+.+.|.+.+++|+.+
T Consensus 43 ~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (249)
T PRK12825 43 AAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSG 118 (249)
T ss_pred HHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHH
Confidence 334444444443 456888999999999999999999888889999999999654 34466788899999988764
No 190
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.95 E-value=4.8e-09 Score=59.11 Aligned_cols=78 Identities=17% Similarity=0.209 Sum_probs=59.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQ 78 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~ 78 (84)
++|+.+..+++.+... ..++..+.+|+++++++..+++.+.+.++++|++||++|... +....+.++|.+.++
T Consensus 41 ~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (264)
T PRK12829 41 CDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLA 116 (264)
T ss_pred EeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 3455554444443332 225678899999999999999999998899999999999863 244677889999999
Q ss_pred cceec
Q psy13141 79 IDQSE 83 (84)
Q Consensus 79 ~n~~~ 83 (84)
+|+.+
T Consensus 117 ~n~~~ 121 (264)
T PRK12829 117 VNLNG 121 (264)
T ss_pred HHhHH
Confidence 98765
No 191
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.95 E-value=5.1e-09 Score=58.54 Aligned_cols=78 Identities=13% Similarity=0.146 Sum_probs=60.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+..+...+.+.... +.++.++++|+++++++.++++.+.+ .+|++|||+|... +..+.+.+++.+.+++
T Consensus 31 ~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~ 106 (243)
T PRK07102 31 AARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPA---LPDIVLIAVGTLGDQAACEADPALALREFRT 106 (243)
T ss_pred EeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhh---cCCEEEECCcCCCCcccccCCHHHHHHHHHh
Confidence 4677777766666665543 45788999999999999998887754 4699999999765 3446677888899999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 107 n~~~ 110 (243)
T PRK07102 107 NFEG 110 (243)
T ss_pred hhHH
Confidence 9875
No 192
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.95 E-value=2.6e-09 Score=59.84 Aligned_cols=61 Identities=18% Similarity=0.278 Sum_probs=53.2
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
..+..+++|+++.+++.++++.+.+.++++|++|||+|... +..+.+.++|.+.+++|+.+
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 110 (252)
T PRK08220 48 YPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGG 110 (252)
T ss_pred CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHH
Confidence 45778899999999999999999999999999999999765 45567888999999999865
No 193
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.91 E-value=8.2e-09 Score=57.29 Aligned_cols=78 Identities=12% Similarity=0.095 Sum_probs=58.8
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+...+...++... .+..+.+|+.+.+++.++++.+.+.++++|+++|++|... +....+.+.+.+.+++
T Consensus 37 ~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 112 (239)
T PRK12828 37 IGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGV 112 (239)
T ss_pred EeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHh
Confidence 356655555544444322 3566779999999999999999999999999999999754 3345677888888888
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.+
T Consensus 113 n~~~ 116 (239)
T PRK12828 113 NVKT 116 (239)
T ss_pred hchh
Confidence 8765
No 194
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.88 E-value=2.6e-09 Score=61.85 Aligned_cols=49 Identities=16% Similarity=0.272 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhhccceecC
Q psy13141 36 DSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 36 ~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~~ 84 (84)
++++++++.+.+++|++|++|||||... ++.+.+.++|++++++|+.|+
T Consensus 104 ~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~ 156 (299)
T PRK06300 104 YTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSF 156 (299)
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHH
Confidence 3589999999999999999999998642 566889999999999998763
No 195
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.79 E-value=1.2e-08 Score=56.63 Aligned_cols=72 Identities=11% Similarity=0.060 Sum_probs=50.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----C----cccCChhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----I----LNRITKDGL 73 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~----~~~~~~~~~ 73 (84)
++|+.++++++.+.+ .+..+.+|+++++++.++++.+.+ ++|++|||+|... + +.+ +.++|
T Consensus 30 ~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~ 98 (223)
T PRK05884 30 VGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAW 98 (223)
T ss_pred EeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCccccCCCCcccchhc-CHHHH
Confidence 356655555444332 245778999999999998877642 6999999998521 1 112 46899
Q ss_pred hhhhccceecC
Q psy13141 74 QLGMQIDQSEV 84 (84)
Q Consensus 74 ~~~~~~n~~~~ 84 (84)
++++++|+.++
T Consensus 99 ~~~~~~N~~~~ 109 (223)
T PRK05884 99 RNALDATVLSA 109 (223)
T ss_pred HHHHHHHHHHH
Confidence 99999998763
No 196
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.79 E-value=1.3e-08 Score=61.58 Aligned_cols=58 Identities=14% Similarity=0.263 Sum_probs=51.1
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
..+.+|+++.+++.++++.+.+.++++|++|||+|... .+.+.+.+.|+.++++|+.+
T Consensus 259 ~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g 318 (450)
T PRK08261 259 TALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLA 318 (450)
T ss_pred eEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHH
Confidence 46789999999999999999998999999999999865 34577889999999999875
No 197
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.78 E-value=2.8e-08 Score=55.88 Aligned_cols=73 Identities=21% Similarity=0.211 Sum_probs=53.4
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQID 80 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n 80 (84)
+|+.+.+.++.+..... +..+..+.+|+++++++...+. +++|++|||+|... +..+.+.+.|+..+++|
T Consensus 33 ~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 104 (257)
T PRK09291 33 VQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETN 104 (257)
T ss_pred eCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHH
Confidence 45555555555554443 4467888999999988766542 47999999999765 45577889999999998
Q ss_pred eec
Q psy13141 81 QSE 83 (84)
Q Consensus 81 ~~~ 83 (84)
+.+
T Consensus 105 ~~~ 107 (257)
T PRK09291 105 VFG 107 (257)
T ss_pred hHH
Confidence 765
No 198
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.77 E-value=3.6e-08 Score=55.33 Aligned_cols=62 Identities=21% Similarity=0.325 Sum_probs=50.2
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCC--cc--eEEEcccCCC---CcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKH--IH--VLINNAGQGG---ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~--id--~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~ 83 (84)
+.+++.+.+|++++++++.+++.+.+.++. ++ ++|+|+|... ++.+.+.++|.+.+++|+.+
T Consensus 47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 115 (251)
T PRK06924 47 NSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLA 115 (251)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceeh
Confidence 346788999999999999999988776542 22 7899999754 35578889999999999876
No 199
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.76 E-value=2.2e-08 Score=55.99 Aligned_cols=73 Identities=10% Similarity=0.079 Sum_probs=52.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQI 79 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~ 79 (84)
++|+.+.++++.+ . ..++..+.+|+++.+++.++++.+.. .+|.+|+|+|... +....+.++|++++++
T Consensus 31 ~~r~~~~~~~~~~----~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~ 101 (240)
T PRK06101 31 CGRNQSVLDELHT----Q--SANIFTLAFDVTDHPGTKAALSQLPF---IPELWIFNAGDCEYMDDGKVDATLMARVFNV 101 (240)
T ss_pred EECCHHHHHHHHH----h--cCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEEEcCcccccCCCCCCCHHHHHHHHHH
Confidence 4566555444332 2 23577889999999999998877642 4789999998654 2335678899999999
Q ss_pred ceec
Q psy13141 80 DQSE 83 (84)
Q Consensus 80 n~~~ 83 (84)
|+.|
T Consensus 102 n~~~ 105 (240)
T PRK06101 102 NVLG 105 (240)
T ss_pred HHHH
Confidence 9875
No 200
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.73 E-value=6.8e-08 Score=53.77 Aligned_cols=79 Identities=14% Similarity=0.046 Sum_probs=57.3
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccce
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~ 81 (84)
++|+.+.++.+...+... ..++.+.+|+++++++.++++.+...++.+|.+++++|........+.+.++..+++|+
T Consensus 35 ~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~ 111 (238)
T PRK05786 35 NSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHI 111 (238)
T ss_pred EeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhc
Confidence 356666665554544432 25788899999999999999998888889999999998654222222377888888887
Q ss_pred ec
Q psy13141 82 SE 83 (84)
Q Consensus 82 ~~ 83 (84)
.+
T Consensus 112 ~~ 113 (238)
T PRK05786 112 KI 113 (238)
T ss_pred hH
Confidence 64
No 201
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.72 E-value=7e-08 Score=54.05 Aligned_cols=75 Identities=20% Similarity=0.177 Sum_probs=53.0
Q ss_pred ccch-hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccce
Q psy13141 3 CRDL-GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 3 ~r~~-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~ 81 (84)
+|+. +..+.+..+++.. +.++..+.+|+++++++..+++.+.+.++.+|++|||+|..... ...+...+++|+
T Consensus 37 ~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~----~~~~~~~~~vn~ 110 (248)
T PRK07806 37 YRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMES----GMDEDYAMRLNR 110 (248)
T ss_pred eCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCC----CCCcceeeEeee
Confidence 4543 3445555555543 44678889999999999999999988888999999999864311 123455677776
Q ss_pred ec
Q psy13141 82 SE 83 (84)
Q Consensus 82 ~~ 83 (84)
.+
T Consensus 111 ~~ 112 (248)
T PRK07806 111 DA 112 (248)
T ss_pred HH
Confidence 54
No 202
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.70 E-value=6.4e-08 Score=53.67 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=47.9
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~ 83 (84)
++....+|+++++++.++++.+.+ +++|+++||+|... ++.+.+.+++++.+++|+.+
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 107 (225)
T PRK08177 46 GVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIA 107 (225)
T ss_pred ccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeH
Confidence 456778999999999999988754 47999999999864 34567889999999999876
No 203
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.66 E-value=5.1e-08 Score=54.25 Aligned_cols=57 Identities=16% Similarity=0.220 Sum_probs=45.1
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--------CcccCChhhhhhhhccceec
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--------ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--------~~~~~~~~~~~~~~~~n~~~ 83 (84)
.++..+++|+++.++++++ .+.++++|++|||+|... ++.+.+.+.|.+.+++|+.+
T Consensus 43 ~~~~~~~~Dls~~~~~~~~----~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~ 107 (235)
T PRK09009 43 DNVQWHALDVTDEAEIKQL----SEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLP 107 (235)
T ss_pred CceEEEEecCCCHHHHHHH----HHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHH
Confidence 3567889999999988774 345688999999999864 13456778899999999875
No 204
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.65 E-value=2.3e-07 Score=52.00 Aligned_cols=53 Identities=8% Similarity=0.216 Sum_probs=45.3
Q ss_pred EeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccce
Q psy13141 29 KLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQ 81 (84)
Q Consensus 29 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~ 81 (84)
.+|+++.+++.++++.+.+.++++|++|||||+.. +..+.+.++|++++..|.
T Consensus 58 ~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~~~~~~ 112 (227)
T TIGR02114 58 NLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPVYMTDLEQVQASDNLNE 112 (227)
T ss_pred cceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccchhhCCHHHHhhhcchhh
Confidence 47999999999999999999999999999999754 456788899998877663
No 205
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.64 E-value=3.5e-08 Score=53.79 Aligned_cols=53 Identities=17% Similarity=0.314 Sum_probs=43.5
Q ss_pred EEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 27 VKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 27 ~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+++|++++++++++++. .+++|++|||+|... ++.+.+.++|++.+++|+.+
T Consensus 35 ~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 89 (199)
T PRK07578 35 DVQVDITDPASIRALFEK----VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMG 89 (199)
T ss_pred ceEecCCChHHHHHHHHh----cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHH
Confidence 467899999998888764 478999999999754 34577889999999999865
No 206
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.64 E-value=1.3e-07 Score=52.94 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=49.6
Q ss_pred CceeEEEEeecCCHHHHHHHHHH-HHhhc---CCcceEEEcccCCC---CcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQ-ILDEE---KHIHVLINNAGQGG---ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~ 83 (84)
+.++..+++|+++.+++.+++.. +.+.+ +++|++|||+|... +..+.+.++|++.+++|+.+
T Consensus 44 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 112 (243)
T PRK07023 44 GERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAA 112 (243)
T ss_pred CCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehH
Confidence 44688899999999999997776 44433 47999999999754 34467889999999999876
No 207
>PRK12742 oxidoreductase; Provisional
Probab=98.63 E-value=1.6e-07 Score=52.23 Aligned_cols=55 Identities=18% Similarity=0.207 Sum_probs=43.8
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+.+|+++.+++.++++ .++++|++|||+|... +..+.+.++|++.+++|+.+
T Consensus 53 ~~~~~~D~~~~~~~~~~~~----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 109 (237)
T PRK12742 53 ATAVQTDSADRDAVIDVVR----KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHA 109 (237)
T ss_pred CeEEecCCCCHHHHHHHHH----HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHH
Confidence 4567899999888776664 3578999999999764 34467789999999999875
No 208
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.60 E-value=3.7e-07 Score=50.70 Aligned_cols=57 Identities=23% Similarity=0.244 Sum_probs=48.0
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
..+.+|+++.+++.++++.+.+.+ ++|++|||+|... ++.+.+.++|.+.+++|+.+
T Consensus 44 ~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 102 (234)
T PRK07577 44 ELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRA 102 (234)
T ss_pred eEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHH
Confidence 467899999999999999988876 5899999999865 34467789999999999865
No 209
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.59 E-value=1.9e-07 Score=51.66 Aligned_cols=57 Identities=21% Similarity=0.204 Sum_probs=45.8
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC----CcccCChhhhhhhhccceec
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG----ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+.+|+++.+++.+++..+.. +++|++|||+|... +..+.+.++|++.+++|+.+
T Consensus 46 ~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 106 (222)
T PRK06953 46 AEALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLG 106 (222)
T ss_pred ceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhh
Confidence 45789999999999988776642 47999999999863 23356889999999999875
No 210
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.58 E-value=2e-07 Score=52.03 Aligned_cols=55 Identities=20% Similarity=0.233 Sum_probs=43.4
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+.+|+++.+++.++++. .+++|++|||+|... +..+.+.++|++.+.+|+.+
T Consensus 55 ~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 111 (245)
T PRK07060 55 CEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARG 111 (245)
T ss_pred CeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 45678999999887776654 578999999999765 33467788999999999765
No 211
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.57 E-value=5.2e-07 Score=53.97 Aligned_cols=42 Identities=7% Similarity=-0.022 Sum_probs=38.2
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+..+..+.+|+++++++.++++.+.+.+|++|++|||+|...
T Consensus 102 G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 102 GLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred CCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 456778899999999999999999999999999999999863
No 212
>PRK08017 oxidoreductase; Provisional
Probab=98.56 E-value=2.3e-07 Score=52.18 Aligned_cols=59 Identities=24% Similarity=0.266 Sum_probs=48.4
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhc-CCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEE-KHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+.+|+++.+++..+++.+.... +.++.++||+|... +..+.+.+.+++.+++|+.|
T Consensus 47 ~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g 108 (256)
T PRK08017 47 FTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFG 108 (256)
T ss_pred CeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHH
Confidence 5678899999999999888887643 68999999999754 34567888999999999865
No 213
>PRK08264 short chain dehydrogenase; Validated
Probab=98.50 E-value=3.8e-07 Score=50.84 Aligned_cols=58 Identities=28% Similarity=0.306 Sum_probs=46.5
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~ 83 (84)
+..+.++.+|+++.+++.++++. .+++|++||++|... ++.+.+.+.|.+.+++|+.+
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 108 (238)
T PRK08264 48 GPRVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFG 108 (238)
T ss_pred CCceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHH
Confidence 34688889999999998776654 468999999999833 35577889999999998765
No 214
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.43 E-value=2.9e-07 Score=51.23 Aligned_cols=54 Identities=19% Similarity=0.156 Sum_probs=41.7
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~n~~~ 83 (84)
++..+.+|++++ ++.+.+.++++|++|||+|... +..+.+.++|++.+++|+.+
T Consensus 46 ~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 102 (235)
T PRK06550 46 NFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTS 102 (235)
T ss_pred cEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHH
Confidence 456778888775 4455556789999999999753 45577889999999999875
No 215
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.40 E-value=4.8e-07 Score=51.13 Aligned_cols=51 Identities=18% Similarity=0.196 Sum_probs=39.9
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceecC
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~ 84 (84)
..+.+|+++.+++.+ .++++|++|||||... ..+.+.++|++.+++|+.++
T Consensus 61 ~~~~~D~~~~~~~~~-------~~~~iDilVnnAG~~~-~~~~~~~~~~~~~~vN~~g~ 111 (245)
T PRK12367 61 EWIKWECGKEESLDK-------QLASLDVLILNHGINP-GGRQDPENINKALEINALSS 111 (245)
T ss_pred eEEEeeCCCHHHHHH-------hcCCCCEEEECCccCC-cCCCCHHHHHHHHHHHhHHH
Confidence 567899999887653 3578999999999753 33467899999999998763
No 216
>KOG1204|consensus
Probab=98.39 E-value=3.5e-07 Score=51.07 Aligned_cols=57 Identities=12% Similarity=0.077 Sum_probs=46.2
Q ss_pred EEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCc-----ccCChhhhhhhhccceecC
Q psy13141 28 KKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGIL-----NRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 28 ~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~-----~~~~~~~~~~~~~~n~~~~ 84 (84)
...|+....-+.+++...+..++..+++|||||..++. +..+.++|++.|++|++++
T Consensus 59 ~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~ 120 (253)
T KOG1204|consen 59 VVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSM 120 (253)
T ss_pred echHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhH
Confidence 34566666677888888888889999999999998742 3567899999999999873
No 217
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.39 E-value=9.4e-07 Score=53.31 Aligned_cols=53 Identities=13% Similarity=0.196 Sum_probs=41.2
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceecC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~~ 84 (84)
.+..+.+|+++++++.+. ++++|++|||||... ..+.+.+++++++++|+.|+
T Consensus 225 ~v~~v~~Dvsd~~~v~~~-------l~~IDiLInnAGi~~-~~~~s~e~~~~~~~vNv~g~ 277 (406)
T PRK07424 225 PVKTLHWQVGQEAALAEL-------LEKVDILIINHGINV-HGERTPEAINKSYEVNTFSA 277 (406)
T ss_pred CeEEEEeeCCCHHHHHHH-------hCCCCEEEECCCcCC-CCCCCHHHHHHHHHHHHHHH
Confidence 466788999998876543 367999999999754 23567889999999998763
No 218
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.33 E-value=5.2e-07 Score=50.65 Aligned_cols=48 Identities=23% Similarity=0.254 Sum_probs=39.4
Q ss_pred EEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 27 VKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 27 ~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+++|+++.+++.++++.+. +++|++|||||... .+.|++++++|+.+
T Consensus 27 ~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~------~~~~~~~~~vN~~~ 74 (241)
T PRK12428 27 FIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG------TAPVELVARVNFLG 74 (241)
T ss_pred hhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC------CCCHHHhhhhchHH
Confidence 56899999999999988764 68999999999752 24588899999875
No 219
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.31 E-value=1.8e-06 Score=47.69 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=43.8
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+.++.+|+++.+++.++++. .+++|++||++|... +....+.++|.+.+++|+.+
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 105 (227)
T PRK08219 48 GATPFPVDLTDPEAIAAAVEQ----LGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVA 105 (227)
T ss_pred cceEEecCCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHH
Confidence 467789999999988777654 357999999999765 34466778898888888764
No 220
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.80 E-value=4.6e-05 Score=44.47 Aligned_cols=52 Identities=13% Similarity=0.036 Sum_probs=36.9
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
.++..+.+|+++.+++.++++ .+|++||+||.... ..+.+.+.+.+++|+.+
T Consensus 56 ~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~g 107 (325)
T PLN02989 56 ERLKLFKADLLDEGSFELAID-------GCETVFHTASPVAI--TVKTDPQVELINPAVNG 107 (325)
T ss_pred CceEEEeCCCCCchHHHHHHc-------CCCEEEEeCCCCCC--CCCCChHHHHHHHHHHH
Confidence 357888999999988777663 48999999996432 22334566777777654
No 221
>PRK08309 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00038 Score=37.84 Aligned_cols=56 Identities=13% Similarity=0.114 Sum_probs=42.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEccc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 60 (84)
++|+.+..+.+...+.. ...+..+.+|+++++++.++++.+.+.++++|.+|+..-
T Consensus 29 ~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh 84 (177)
T PRK08309 29 IARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIH 84 (177)
T ss_pred EECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 35666655555544432 346788899999999999999999888899999887654
No 222
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=97.56 E-value=0.00023 Score=44.69 Aligned_cols=75 Identities=12% Similarity=0.022 Sum_probs=57.4
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-CcccCChhhhhhhhccc
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-ILNRITKDGLQLGMQID 80 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~n 80 (84)
.+|++-+...+..+++..+|..+..++-+|+.|.+.+..++.. -++|+++|.|+.-+ |..+ .+..+.+..|
T Consensus 281 ~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~-----~kvd~VfHAAA~KHVPl~E---~nP~Eai~tN 352 (588)
T COG1086 281 FSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG-----HKVDIVFHAAALKHVPLVE---YNPEEAIKTN 352 (588)
T ss_pred ecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc-----CCCceEEEhhhhccCcchh---cCHHHHHHHh
Confidence 4678888888899999988767888999999999887776644 26999999998866 4322 4556677777
Q ss_pred eecC
Q psy13141 81 QSEV 84 (84)
Q Consensus 81 ~~~~ 84 (84)
+.|+
T Consensus 353 V~GT 356 (588)
T COG1086 353 VLGT 356 (588)
T ss_pred hHhH
Confidence 7663
No 223
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.46 E-value=0.00032 Score=41.20 Aligned_cols=51 Identities=4% Similarity=-0.079 Sum_probs=35.1
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-CcccCChhhhhhhhccceec
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~n~~~ 83 (84)
.++.++.+|+++.+.+.++++ .+|++||+||... +....+ ....+++|+.+
T Consensus 53 ~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~Ag~~~~~~~~~~---~~~~~~~Nv~g 104 (324)
T TIGR03589 53 PCLRFFIGDVRDKERLTRALR-------GVDYVVHAAALKQVPAAEYN---PFECIRTNING 104 (324)
T ss_pred CcEEEEEccCCCHHHHHHHHh-------cCCEEEECcccCCCchhhcC---HHHHHHHHHHH
Confidence 357788999999988777653 4899999999754 222222 23567777654
No 224
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.33 E-value=0.00047 Score=40.78 Aligned_cols=53 Identities=11% Similarity=0.058 Sum_probs=37.2
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
++..+.+|+++.+++.++++.. .+|++||+||.... ..+.+++...+++|+.+
T Consensus 53 ~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~~~~--~~~~~~~~~~~~~N~~g 105 (349)
T TIGR02622 53 KIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQPLV--RKSYADPLETFETNVMG 105 (349)
T ss_pred CceEEEccCCCHHHHHHHHhhc-----CCCEEEECCccccc--ccchhCHHHHHHHhHHH
Confidence 4667889999999888877653 58999999985431 22334556667777654
No 225
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=97.33 E-value=5.4e-05 Score=44.06 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=42.5
Q ss_pred CccchhhHHHHHHHHHhhcCCcee----EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-CcccCChhhhhhh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQV----VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-ILNRITKDGLQLG 76 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~ 76 (84)
.+|++..+..+..++...+++.++ ..+.+|++|.+.+.++++. .++|+++|.|+.-+ +..+ +...+.
T Consensus 29 ~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----~~pdiVfHaAA~KhVpl~E---~~p~ea 100 (293)
T PF02719_consen 29 FDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----YKPDIVFHAAALKHVPLME---DNPFEA 100 (293)
T ss_dssp EES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-------T-SEEEE------HHHHC---CCHHHH
T ss_pred eCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----cCCCEEEEChhcCCCChHH---hCHHHH
Confidence 577888888888888766544333 3457799998877666643 26999999998766 3323 355667
Q ss_pred hccceec
Q psy13141 77 MQIDQSE 83 (84)
Q Consensus 77 ~~~n~~~ 83 (84)
+++|+.|
T Consensus 101 v~tNv~G 107 (293)
T PF02719_consen 101 VKTNVLG 107 (293)
T ss_dssp HHHHCHH
T ss_pred HHHHHHH
Confidence 7777765
No 226
>KOG2733|consensus
Probab=97.28 E-value=0.0012 Score=39.66 Aligned_cols=55 Identities=31% Similarity=0.286 Sum_probs=42.5
Q ss_pred CCccchhhHHHHHHHHHhhcCC--ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 1 MACRDLGKANGVRESIITKTNN--HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+++|+++++++..+.+.+..+. .....+.+|.++++++.++... --+++||+|..
T Consensus 38 vAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~-------~~vivN~vGPy 94 (423)
T KOG2733|consen 38 VAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ-------ARVIVNCVGPY 94 (423)
T ss_pred EecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh-------hEEEEeccccc
Confidence 4789999999999998877521 2233788999999999888755 35788999854
No 227
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=97.25 E-value=0.00054 Score=40.52 Aligned_cols=53 Identities=9% Similarity=0.165 Sum_probs=37.0
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+..+.+|+++.+++.++++. ..+|++||+||.... ..+.+++...+++|+.+
T Consensus 52 ~~~~~~~Dl~d~~~~~~~~~~-----~~~D~Vih~A~~~~~--~~~~~~~~~~~~~N~~g 104 (355)
T PRK10217 52 RFAFEKVDICDRAELARVFTE-----HQPDCVMHLAAESHV--DRSIDGPAAFIETNIVG 104 (355)
T ss_pred ceEEEECCCcChHHHHHHHhh-----cCCCEEEECCcccCc--chhhhChHHHHHHhhHH
Confidence 466778999999988777764 258999999987532 22234556667777643
No 228
>PLN02572 UDP-sulfoquinovose synthase
Probab=97.23 E-value=0.00043 Score=42.49 Aligned_cols=55 Identities=7% Similarity=0.050 Sum_probs=39.2
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-CcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~n~~~ 83 (84)
++.++.+|+++.+.+.++++.. ++|++||+|+... +....+++++...+++|+.|
T Consensus 114 ~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~g 169 (442)
T PLN02572 114 EIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIG 169 (442)
T ss_pred cceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHH
Confidence 5788899999999888877653 5899999997644 22334445556667777654
No 229
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.23 E-value=0.00084 Score=42.52 Aligned_cols=55 Identities=16% Similarity=0.196 Sum_probs=36.9
Q ss_pred CccchhhHHHHHHHHHhh-----c--CCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 2 ACRDLGKANGVRESIITK-----T--NNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~-----~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+.|+.+.++.+.+.+... . +..++.++.+|+.+.+++.+ .++.+|++|||+|...
T Consensus 110 l~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~-------aLggiDiVVn~AG~~~ 171 (576)
T PLN03209 110 GVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP-------ALGNASVVICCIGASE 171 (576)
T ss_pred EeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH-------HhcCCCEEEEcccccc
Confidence 357777766665554321 0 01357889999999887654 3467999999998753
No 230
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.11 E-value=0.003 Score=35.72 Aligned_cols=45 Identities=11% Similarity=0.102 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhcccee
Q psy13141 38 VREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 38 ~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~ 82 (84)
..++.+.+.+..+.+|++|||||+.. +....+.++|..++++|.+
T Consensus 68 ~~~m~~~l~~~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~ 114 (229)
T PRK06732 68 VDDLLETLEPLVKDHDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEF 114 (229)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCccCCceehhhhhhhhhhhhhhhhhh
Confidence 34444555555667999999999865 3345667888888888754
No 231
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=97.09 E-value=0.0013 Score=38.88 Aligned_cols=53 Identities=11% Similarity=0.116 Sum_probs=35.8
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+.++.+|+++.+++.++++. ..+|++||+||..... .........+++|+.|
T Consensus 51 ~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~--~~~~~~~~~~~~N~~g 103 (352)
T PRK10084 51 RYVFEHADICDRAELDRIFAQ-----HQPDAVMHLAAESHVD--RSITGPAAFIETNIVG 103 (352)
T ss_pred ceEEEEecCCCHHHHHHHHHh-----cCCCEEEECCcccCCc--chhcCchhhhhhhhHH
Confidence 466788999999988887754 2699999999875321 1112334566666544
No 232
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.91 E-value=0.0026 Score=37.07 Aligned_cols=48 Identities=21% Similarity=0.327 Sum_probs=34.0
Q ss_pred EeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 29 KLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 29 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
.+|+++++.+.+++.+. ++|++||+|++..- +.-+.+-+..+.+|..|
T Consensus 33 ~~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~v--D~aE~~~e~A~~vNa~~ 80 (281)
T COG1091 33 ELDITDPDAVLEVIRET-----RPDVVINAAAYTAV--DKAESEPELAFAVNATG 80 (281)
T ss_pred cccccChHHHHHHHHhh-----CCCEEEECcccccc--ccccCCHHHHHHhHHHH
Confidence 47999999998888775 79999999987641 12223345666777554
No 233
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=96.85 E-value=0.0018 Score=38.14 Aligned_cols=36 Identities=22% Similarity=0.235 Sum_probs=29.1
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+..+.+|+++.+++..+++.. .+|++||+||...
T Consensus 60 ~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~ 95 (340)
T PLN02653 60 ARMKLHYGDLSDASSLRRWLDDI-----KPDEVYNLAAQSH 95 (340)
T ss_pred CceEEEEecCCCHHHHHHHHHHc-----CCCEEEECCcccc
Confidence 34778899999999988877654 4899999999754
No 234
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.79 E-value=0.003 Score=36.94 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=26.2
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
..+..+.+|+++++.+..+++ .+|++||+||..
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~vih~A~~~ 88 (322)
T PLN02986 56 ERLKLFKADLLEESSFEQAIE-------GCDAVFHTASPV 88 (322)
T ss_pred CceEEEecCCCCcchHHHHHh-------CCCEEEEeCCCc
Confidence 357788899999888776664 489999999864
No 235
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=96.55 E-value=0.0031 Score=36.44 Aligned_cols=35 Identities=11% Similarity=0.113 Sum_probs=27.7
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+..+.+|+++++++.++++.. ++|++||+||...
T Consensus 51 ~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~ 85 (317)
T TIGR01181 51 RYRFVKGDIGDRELVSRLFTEH-----QPDAVVHFAAESH 85 (317)
T ss_pred CcEEEEcCCcCHHHHHHHHhhc-----CCCEEEEcccccC
Confidence 4677889999999887777542 5899999998654
No 236
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=96.46 E-value=0.0047 Score=36.54 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=28.5
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+..+.+|+++.+.+.++++.. .+|++||+|+...
T Consensus 56 ~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViH~Aa~~~ 90 (343)
T TIGR01472 56 RMKLHYGDLTDSSNLRRIIDEI-----KPTEIYNLAAQSH 90 (343)
T ss_pred ceeEEEeccCCHHHHHHHHHhC-----CCCEEEECCcccc
Confidence 4778899999999887777653 4899999999754
No 237
>PLN02240 UDP-glucose 4-epimerase
Probab=96.42 E-value=0.0049 Score=36.43 Aligned_cols=53 Identities=17% Similarity=0.172 Sum_probs=35.7
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhcccee
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~ 82 (84)
.++..+.+|+.+++++..+++. ..+|++||+||..... .+.+++...+++|+.
T Consensus 58 ~~~~~~~~D~~~~~~l~~~~~~-----~~~d~vih~a~~~~~~--~~~~~~~~~~~~n~~ 110 (352)
T PLN02240 58 DNLVFHKVDLRDKEALEKVFAS-----TRFDAVIHFAGLKAVG--ESVAKPLLYYDNNLV 110 (352)
T ss_pred ccceEEecCcCCHHHHHHHHHh-----CCCCEEEEccccCCcc--ccccCHHHHHHHHHH
Confidence 3577888999999988777654 2689999999875321 122344555666554
No 238
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=96.40 E-value=0.018 Score=34.29 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=26.7
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+..+.+|+.+.+.+.+++. .+|++||+||...
T Consensus 58 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~ 91 (353)
T PLN02896 58 DRLRLFRADLQEEGSFDEAVK-------GCDGVFHVAASME 91 (353)
T ss_pred CeEEEEECCCCCHHHHHHHHc-------CCCEEEECCcccc
Confidence 357788999999888766652 4799999999754
No 239
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=96.36 E-value=0.0066 Score=35.23 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=27.9
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+..+.+|+.+.+++..++.. +++|++||++|...
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~~~ 82 (328)
T TIGR01179 48 RVTFVEGDLRDRELLDRLFEE-----HKIDAVIHFAGLIA 82 (328)
T ss_pred ceEEEECCCCCHHHHHHHHHh-----CCCcEEEECccccC
Confidence 466778999999988877653 47999999999754
No 240
>PLN02650 dihydroflavonol-4-reductase
Probab=96.16 E-value=0.016 Score=34.42 Aligned_cols=32 Identities=19% Similarity=0.058 Sum_probs=25.3
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
++.++.+|+++.+.+..+++ .+|.+||+|+..
T Consensus 57 ~~~~v~~Dl~d~~~~~~~~~-------~~d~ViH~A~~~ 88 (351)
T PLN02650 57 RLTLWKADLAVEGSFDDAIR-------GCTGVFHVATPM 88 (351)
T ss_pred ceEEEEecCCChhhHHHHHh-------CCCEEEEeCCCC
Confidence 57788899999888766653 479999999864
No 241
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=96.04 E-value=0.0064 Score=35.35 Aligned_cols=48 Identities=19% Similarity=0.321 Sum_probs=26.6
Q ss_pred HHHHHHHHHhhcCCceeEEE---EeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 9 ANGVRESIITKTNNHQVVVK---KLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+..+...+... +-.+..+ .+|+.+.+.+.+++... ++|++||+||+..
T Consensus 13 G~~l~~~l~~~--~~~v~~~~r~~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~ 63 (286)
T PF04321_consen 13 GSALARALKER--GYEVIATSRSDLDLTDPEAVAKLLEAF-----KPDVVINCAAYTN 63 (286)
T ss_dssp HHHHHHHHTTT--SEEEEEESTTCS-TTSHHHHHHHHHHH-------SEEEE------
T ss_pred HHHHHHHHhhC--CCEEEEeCchhcCCCCHHHHHHHHHHh-----CCCeEeccceeec
Confidence 44555666543 3345555 67999988888877664 5899999998754
No 242
>PLN02778 3,5-epimerase/4-reductase
Probab=96.03 E-value=0.026 Score=33.01 Aligned_cols=67 Identities=9% Similarity=-0.075 Sum_probs=38.0
Q ss_pred HHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCc-ccCChhhhhhhhccceec
Q psy13141 10 NGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGIL-NRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~n~~~ 83 (84)
..+.+.+... +.++.....|+.+.+.+...+.. .++|+++|+||..+.. .....++-...+++|+.+
T Consensus 23 ~~l~~~L~~~--g~~V~~~~~~~~~~~~v~~~l~~-----~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~g 90 (298)
T PLN02778 23 GLLGKLCQEQ--GIDFHYGSGRLENRASLEADIDA-----VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVG 90 (298)
T ss_pred HHHHHHHHhC--CCEEEEecCccCCHHHHHHHHHh-----cCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHH
Confidence 3455556555 55666566677777665555443 2589999999976521 111112334455566543
No 243
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=96.02 E-value=0.019 Score=33.76 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=27.0
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
++..+.+|+.+.+.+..+++. .++|++||+||...
T Consensus 51 ~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vvh~a~~~~ 85 (338)
T PRK10675 51 HPTFVEGDIRNEALLTEILHD-----HAIDTVIHFAGLKA 85 (338)
T ss_pred CceEEEccCCCHHHHHHHHhc-----CCCCEEEECCcccc
Confidence 466778999998887776643 36999999998754
No 244
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=95.99 E-value=0.027 Score=36.41 Aligned_cols=67 Identities=10% Similarity=-0.057 Sum_probs=39.6
Q ss_pred HHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCc-ccCChhhhhhhhccceec
Q psy13141 10 NGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGIL-NRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~n~~~ 83 (84)
..+.+.+... +..+.....|+++.+.+...+... ++|++||+|+..... .+...++-...+++|+.+
T Consensus 394 ~~l~~~L~~~--g~~v~~~~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~g 461 (668)
T PLN02260 394 GLLGKLCEKQ--GIAYEYGKGRLEDRSSLLADIRNV-----KPTHVFNAAGVTGRPNVDWCESHKVETIRANVVG 461 (668)
T ss_pred HHHHHHHHhC--CCeEEeeccccccHHHHHHHHHhh-----CCCEEEECCcccCCCCCChHHhCHHHHHHHHhHH
Confidence 4455555544 444544567888887776665442 589999999976521 222223445556666544
No 245
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=95.97 E-value=0.012 Score=34.25 Aligned_cols=47 Identities=11% Similarity=0.044 Sum_probs=33.7
Q ss_pred EEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 27 VKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 27 ~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
++.+|+++++++.+.++ ..|+++|.|+...... ....+..+++|+.|
T Consensus 49 ~~~~Di~d~~~l~~a~~-------g~d~V~H~Aa~~~~~~---~~~~~~~~~vNV~G 95 (280)
T PF01073_consen 49 YIQGDITDPESLEEALE-------GVDVVFHTAAPVPPWG---DYPPEEYYKVNVDG 95 (280)
T ss_pred EEEeccccHHHHHHHhc-------CCceEEEeCccccccC---cccHHHHHHHHHHH
Confidence 78999999988877663 4789999998754322 23445667777655
No 246
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.81 E-value=0.029 Score=33.90 Aligned_cols=50 Identities=28% Similarity=0.345 Sum_probs=34.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
++|+.++++++.+.+. +.++...++|+.+.+++.++++ .-|++||++|..
T Consensus 29 a~r~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~l~~~~~-------~~dvVin~~gp~ 78 (386)
T PF03435_consen 29 ADRNPEKAERLAEKLL----GDRVEAVQVDVNDPESLAELLR-------GCDVVINCAGPF 78 (386)
T ss_dssp EESSHHHHHHHHT--T----TTTEEEEE--TTTHHHHHHHHT-------TSSEEEE-SSGG
T ss_pred EECCHHHHHHHHhhcc----ccceeEEEEecCCHHHHHHHHh-------cCCEEEECCccc
Confidence 5788888877776652 5578999999999888766652 349999999864
No 247
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=95.66 E-value=0.1 Score=32.09 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=23.8
Q ss_pred EeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 29 KLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 29 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+|+++.+++.+.+ .+.++.+|++|||||+..
T Consensus 248 ~~dv~~~~~~~~~v---~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 248 RIDVESAQEMLDAV---LAALPQADIFIMAAAVAD 279 (399)
T ss_pred EEccCCHHHHHHHH---HHhcCCCCEEEEcccccc
Confidence 46777777765554 455788999999999754
No 248
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.52 E-value=0.03 Score=32.70 Aligned_cols=33 Identities=12% Similarity=-0.009 Sum_probs=25.6
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
++.++.+|+.+++.+..+++ .+|++||+||...
T Consensus 56 ~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~ 88 (322)
T PLN02662 56 RLHLFKANLLEEGSFDSVVD-------GCEGVFHTASPFY 88 (322)
T ss_pred ceEEEeccccCcchHHHHHc-------CCCEEEEeCCccc
Confidence 57788899999887666553 4799999998643
No 249
>PLN02214 cinnamoyl-CoA reductase
Probab=95.48 E-value=0.019 Score=34.11 Aligned_cols=32 Identities=13% Similarity=0.207 Sum_probs=25.5
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
++.++.+|+++.+++..+++ .+|++||+||..
T Consensus 61 ~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~ 92 (342)
T PLN02214 61 RLILCKADLQDYEALKAAID-------GCDGVFHTASPV 92 (342)
T ss_pred cEEEEecCcCChHHHHHHHh-------cCCEEEEecCCC
Confidence 57778899999888776653 489999999864
No 250
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.28 E-value=0.031 Score=33.03 Aligned_cols=32 Identities=16% Similarity=0.086 Sum_probs=25.0
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
++..+.+|+++.+++.++++ .+|+++|+||..
T Consensus 60 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~ 91 (338)
T PLN00198 60 DLKIFGADLTDEESFEAPIA-------GCDLVFHVATPV 91 (338)
T ss_pred ceEEEEcCCCChHHHHHHHh-------cCCEEEEeCCCC
Confidence 46778899999887766553 479999999853
No 251
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.63 E-value=0.084 Score=30.96 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=30.9
Q ss_pred Cccch---hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 2 ACRDL---GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 2 ~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
++|+. ++++++.+++...+ ..+....+|+.+.+++...+ ...|++|||...
T Consensus 156 ~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~-------~~~DilINaTp~ 209 (289)
T PRK12548 156 FNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEI-------ASSDILVNATLV 209 (289)
T ss_pred EeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhh-------ccCCEEEEeCCC
Confidence 45665 56677777775542 23445567776655554332 235999998754
No 252
>PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=94.19 E-value=0.34 Score=27.70 Aligned_cols=41 Identities=7% Similarity=-0.015 Sum_probs=30.0
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
|.....+..|.-+.+--++.++.+++.+|.+|.+|..-+..
T Consensus 22 Gl~a~~ingDAFS~e~K~~vI~~Ik~~~G~vDLvVYSLAsp 62 (237)
T PF12241_consen 22 GLYAKSINGDAFSDEMKEQVIELIKEDFGKVDLVVYSLASP 62 (237)
T ss_dssp T--EEEEES-TTSHHHHHHHHHHHHHHTS-EEEEEE----S
T ss_pred CCeeeecccccCCHHHHHHHHHHHHHhcCCccEEEEeccCC
Confidence 66678889999999999999999999999999999876543
No 253
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=94.13 E-value=0.48 Score=25.72 Aligned_cols=58 Identities=5% Similarity=-0.029 Sum_probs=39.1
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+-+++.++++.+.+++.||+.++.....---++++.+++++.+.+. +.|+++..-|..
T Consensus 55 G~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~--~pdiv~vglG~P 112 (172)
T PF03808_consen 55 GGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINAS--GPDIVFVGLGAP 112 (172)
T ss_pred eCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECCCC
Confidence 4456777888888988888766654332212666777788887764 568777666654
No 254
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=93.97 E-value=0.077 Score=29.42 Aligned_cols=35 Identities=20% Similarity=0.227 Sum_probs=29.4
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+..+.+|+.+.+.+.++++.. .+|.++|.||...
T Consensus 43 ~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~ 77 (236)
T PF01370_consen 43 NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFSS 77 (236)
T ss_dssp TEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSSSS
T ss_pred eEEEEEeecccccccccccccc-----CceEEEEeecccc
Confidence 5678889999999988888765 7999999998753
No 255
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=93.67 E-value=0.16 Score=31.19 Aligned_cols=50 Identities=24% Similarity=0.276 Sum_probs=35.2
Q ss_pred CCccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+++|+.+++.++.... ..++.+.++|+.+.+++.++++. .|++||++...
T Consensus 30 iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------~d~VIn~~p~~ 79 (389)
T COG1748 30 IADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------FDLVINAAPPF 79 (389)
T ss_pred EEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------CCEEEEeCCch
Confidence 3578877777766554 33688999999998877666543 28888887643
No 256
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=93.46 E-value=0.72 Score=28.47 Aligned_cols=32 Identities=9% Similarity=0.244 Sum_probs=23.2
Q ss_pred EeecCCHHHH-HHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 29 KLDLASLDSV-REFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 29 ~~D~~~~~~~-~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+|+.+.+++ ++.++. .++.+|++|+|||+..
T Consensus 245 ~~~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd 277 (390)
T TIGR00521 245 SIKVSTAEEMLEAALNE---LAKDFDIFISAAAVAD 277 (390)
T ss_pred EEEeccHHHHHHHHHHh---hcccCCEEEEcccccc
Confidence 4688888777 444433 3467999999999864
No 257
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=93.30 E-value=0.42 Score=27.48 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhcCCceeEEE---EeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 9 ANGVRESIITKTNNHQVVVK---KLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+..+.+.+.+. +.++..+ .+|+.+.+++.++++. ..+|++||++|...
T Consensus 12 G~~l~~~l~~~--g~~v~~~~r~~~d~~~~~~~~~~~~~-----~~~d~vi~~a~~~~ 62 (287)
T TIGR01214 12 GRELVQQLSPE--GRVVVALTSSQLDLTDPEALERLLRA-----IRPDAVVNTAAYTD 62 (287)
T ss_pred HHHHHHHHHhc--CCEEEEeCCcccCCCCHHHHHHHHHh-----CCCCEEEECCcccc
Confidence 34456666554 4444433 4688888887777644 25899999998653
No 258
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=93.21 E-value=0.13 Score=29.93 Aligned_cols=48 Identities=8% Similarity=0.007 Sum_probs=26.6
Q ss_pred EEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhcccee
Q psy13141 28 KKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 28 ~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~ 82 (84)
+..|+.+.+.++.+.+. .+..+|++||+||.... ...+....+++|+.
T Consensus 46 ~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~~----~~~~~~~~~~~n~~ 93 (314)
T TIGR02197 46 IADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSDT----TETDGEYMMENNYQ 93 (314)
T ss_pred eeccCcchhHHHHHHhh---ccCCCCEEEECccccCc----cccchHHHHHHHHH
Confidence 34566665554443332 24579999999986431 12234445555543
No 259
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=92.81 E-value=0.91 Score=24.92 Aligned_cols=58 Identities=10% Similarity=0.021 Sum_probs=37.7
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
.+-+++.++++.+.+++.||+.++.....-+ ++++-+++++.|.+. ..|+++..-|..
T Consensus 54 lG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f-~~~~~~~i~~~I~~s--~~dil~VglG~P 111 (177)
T TIGR00696 54 YGGKPDVLQQLKVKLIKEYPKLKIVGAFGPL-EPEERKAALAKIARS--GAGIVFVGLGCP 111 (177)
T ss_pred ECCCHHHHHHHHHHHHHHCCCCEEEEECCCC-ChHHHHHHHHHHHHc--CCCEEEEEcCCc
Confidence 3456677788888888888877665553333 344556677777664 477776666654
No 260
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=92.56 E-value=0.44 Score=28.59 Aligned_cols=37 Identities=8% Similarity=0.093 Sum_probs=29.0
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+..+++.|++|.+.+.+++++- .+|++||=|+-.+
T Consensus 50 ~~~~~fv~~DI~D~~~v~~~~~~~-----~~D~VvhfAAESH 86 (340)
T COG1088 50 SPRYRFVQGDICDRELVDRLFKEY-----QPDAVVHFAAESH 86 (340)
T ss_pred CCCceEEeccccCHHHHHHHHHhc-----CCCeEEEechhcc
Confidence 347889999999988877777542 6899999887544
No 261
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=92.46 E-value=0.22 Score=29.03 Aligned_cols=32 Identities=25% Similarity=0.197 Sum_probs=24.4
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
.+..+.+|+.+.+++.++++ .+|+++|+++..
T Consensus 44 ~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~ 75 (328)
T TIGR03466 44 DVEIVEGDLRDPASLRKAVA-------GCRALFHVAADY 75 (328)
T ss_pred CceEEEeeCCCHHHHHHHHh-------CCCEEEEeceec
Confidence 46678899999887766553 479999999754
No 262
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=92.42 E-value=0.39 Score=29.36 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=28.2
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
.+..+.+|+++++++..+++.. ...+|++|||+|..
T Consensus 112 ~v~~v~~Dl~d~~~l~~~~~~~---~~~~D~Vi~~aa~~ 147 (390)
T PLN02657 112 GAEVVFGDVTDADSLRKVLFSE---GDPVDVVVSCLASR 147 (390)
T ss_pred CceEEEeeCCCHHHHHHHHHHh---CCCCcEEEECCccC
Confidence 5778899999999988877643 12699999998753
No 263
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=92.30 E-value=0.22 Score=29.73 Aligned_cols=33 Identities=9% Similarity=0.286 Sum_probs=24.8
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
++.++.+|+.+.+.+..+++ .+|++||.|+...
T Consensus 70 ~~~~~~~Di~d~~~l~~~~~-------~~d~ViHlAa~~~ 102 (348)
T PRK15181 70 RFIFIQGDIRKFTDCQKACK-------NVDYVLHQAALGS 102 (348)
T ss_pred ceEEEEccCCCHHHHHHHhh-------CCCEEEECccccC
Confidence 46778899999877655542 3799999998654
No 264
>PLN02583 cinnamoyl-CoA reductase
Probab=92.21 E-value=0.46 Score=27.77 Aligned_cols=50 Identities=10% Similarity=-0.033 Sum_probs=30.8
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
.++..+.+|+++.+++...+ ...+.++|.++.... .. ..++..+++|+.|
T Consensus 57 ~~~~~~~~Dl~d~~~~~~~l-------~~~d~v~~~~~~~~~---~~-~~~~~~~~~nv~g 106 (297)
T PLN02583 57 ERLKVFDVDPLDYHSILDAL-------KGCSGLFCCFDPPSD---YP-SYDEKMVDVEVRA 106 (297)
T ss_pred CceEEEEecCCCHHHHHHHH-------cCCCEEEEeCccCCc---cc-ccHHHHHHHHHHH
Confidence 35778889999988775443 246777776543221 11 2456677777654
No 265
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=92.20 E-value=1.1 Score=24.35 Aligned_cols=57 Identities=11% Similarity=0.037 Sum_probs=33.8
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEE-eecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKK-LDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+-+++.++++.+.+++.+|+.++.... .-+. .+....+++.+.+. ..|+++..-|..
T Consensus 53 G~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~-~~~~~~i~~~I~~~--~pdiv~vglG~P 110 (171)
T cd06533 53 GAKPEVLEKAAERLRARYPGLKIVGYHHGYFG-PEEEEEIIERINAS--GADILFVGLGAP 110 (171)
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEecCCCCC-hhhHHHHHHHHHHc--CCCEEEEECCCC
Confidence 455667777778888888776655532 2232 23334456666554 467776666653
No 266
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=91.46 E-value=0.17 Score=29.56 Aligned_cols=30 Identities=20% Similarity=0.225 Sum_probs=22.5
Q ss_pred EeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 29 KLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 29 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..|+.+.+.+.++++. .++|++||+|+...
T Consensus 37 ~~Dl~d~~~~~~~~~~-----~~~D~Vih~Aa~~~ 66 (299)
T PRK09987 37 CGDFSNPEGVAETVRK-----IRPDVIVNAAAHTA 66 (299)
T ss_pred cCCCCCHHHHHHHHHh-----cCCCEEEECCccCC
Confidence 3588888877766653 25899999998765
No 267
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=91.41 E-value=1.9 Score=27.19 Aligned_cols=63 Identities=14% Similarity=0.187 Sum_probs=47.4
Q ss_pred CCccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHh--hcCCcceEEEcccCCC
Q psy13141 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILD--EEKHIHVLINNAGQGG 63 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~~id~lv~~ag~~~ 63 (84)
|++++-..+.++...+...+|...+.+++.-+.=..+..++++.+.. ..+.+|++|..-|-+.
T Consensus 141 ITS~tgAairDIl~~~~rR~P~~~viv~pt~VQG~~A~~eIv~aI~~an~~~~~DvlIVaRGGGS 205 (440)
T COG1570 141 ITSPTGAALRDILHTLSRRFPSVEVIVYPTLVQGEGAAEEIVEAIERANQRGDVDVLIVARGGGS 205 (440)
T ss_pred EcCCchHHHHHHHHHHHhhCCCCeEEEEeccccCCCcHHHHHHHHHHhhccCCCCEEEEecCcch
Confidence 46777778888899999999888888877766666677777777664 3456999998877543
No 268
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=90.56 E-value=0.26 Score=28.57 Aligned_cols=30 Identities=30% Similarity=0.371 Sum_probs=22.4
Q ss_pred EeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 29 KLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 29 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+|+.+.+++..+++. ..+|++||+|+...
T Consensus 32 ~~Dl~~~~~l~~~~~~-----~~~d~Vih~A~~~~ 61 (306)
T PLN02725 32 ELDLTRQADVEAFFAK-----EKPTYVILAAAKVG 61 (306)
T ss_pred cCCCCCHHHHHHHHhc-----cCCCEEEEeeeeec
Confidence 5788888877766544 25799999998643
No 269
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=90.48 E-value=0.1 Score=29.73 Aligned_cols=39 Identities=18% Similarity=0.213 Sum_probs=19.6
Q ss_pred CceeEEEEeecCCHH-HH-HHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 22 NHQVVVKKLDLASLD-SV-REFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~-~~-~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+++++..|++.+. .+ ....+.+. ..+|+++|||+...
T Consensus 59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~---~~v~~IiH~Aa~v~ 99 (249)
T PF07993_consen 59 LSRIEVVEGDLSQPNLGLSDEDYQELA---EEVDVIIHCAASVN 99 (249)
T ss_dssp TTTEEEEE--TTSGGGG--HHHHHHHH---HH--EEEE--SS-S
T ss_pred hccEEEEeccccccccCCChHHhhccc---cccceeeecchhhh
Confidence 457999999999864 11 11223332 35899999998754
No 270
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=90.45 E-value=1.3 Score=23.65 Aligned_cols=31 Identities=32% Similarity=0.321 Sum_probs=22.7
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
++..+.+|+.+++++.+.+ ...|.+++++|.
T Consensus 40 ~~~~~~~d~~d~~~~~~al-------~~~d~vi~~~~~ 70 (183)
T PF13460_consen 40 GVEIIQGDLFDPDSVKAAL-------KGADAVIHAAGP 70 (183)
T ss_dssp TEEEEESCTTCHHHHHHHH-------TTSSEEEECCHS
T ss_pred ccccceeeehhhhhhhhhh-------hhcchhhhhhhh
Confidence 5788889998886665544 257888888864
No 271
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=90.14 E-value=0.51 Score=30.82 Aligned_cols=35 Identities=26% Similarity=0.207 Sum_probs=25.9
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
++..+.+|+.+.+.+..++.. ..+|++||+|+...
T Consensus 58 ~v~~~~~Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~ 92 (668)
T PLN02260 58 NFKFVKGDIASADLVNYLLIT-----EGIDTIMHFAAQTH 92 (668)
T ss_pred CeEEEECCCCChHHHHHHHhh-----cCCCEEEECCCccC
Confidence 577788999998766554322 36999999998754
No 272
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=88.23 E-value=0.88 Score=27.78 Aligned_cols=48 Identities=23% Similarity=0.310 Sum_probs=31.3
Q ss_pred CCccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 1 MACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 1 l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
|.+|+..+++.+...+.. +...+.+.+ +..++++. ....+++||+|..
T Consensus 35 LAgRs~~kl~~l~~~LG~-----~~~~~p~~~--p~~~~~~~-------~~~~VVlncvGPy 82 (382)
T COG3268 35 LAGRSSAKLDALRASLGP-----EAAVFPLGV--PAALEAMA-------SRTQVVLNCVGPY 82 (382)
T ss_pred hccCCHHHHHHHHHhcCc-----cccccCCCC--HHHHHHHH-------hcceEEEeccccc
Confidence 568999999988888743 333433433 44444433 4578899999954
No 273
>KOG1371|consensus
Probab=87.83 E-value=2.4 Score=25.80 Aligned_cols=37 Identities=11% Similarity=0.247 Sum_probs=30.4
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+..+.+...|++|.+.++++|+.. .+|.++|=|+...
T Consensus 53 ~~~v~f~~~Dl~D~~~L~kvF~~~-----~fd~V~Hfa~~~~ 89 (343)
T KOG1371|consen 53 GKSVFFVEGDLNDAEALEKLFSEV-----KFDAVMHFAALAA 89 (343)
T ss_pred CCceEEEEeccCCHHHHHHHHhhc-----CCceEEeehhhhc
Confidence 467899999999999988888764 4899999888654
No 274
>PLN02427 UDP-apiose/xylose synthase
Probab=87.83 E-value=1.2 Score=27.00 Aligned_cols=33 Identities=9% Similarity=0.140 Sum_probs=25.3
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
++.++.+|+.+.+.+.++++ ..|++||+|+...
T Consensus 66 ~~~~~~~Dl~d~~~l~~~~~-------~~d~ViHlAa~~~ 98 (386)
T PLN02427 66 RIQFHRINIKHDSRLEGLIK-------MADLTINLAAICT 98 (386)
T ss_pred CeEEEEcCCCChHHHHHHhh-------cCCEEEEcccccC
Confidence 57788899999877665552 3799999998654
No 275
>PLN02996 fatty acyl-CoA reductase
Probab=87.49 E-value=0.97 Score=28.66 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=23.2
Q ss_pred ceeEEEEeecCCH-------HHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 23 HQVVVKKLDLASL-------DSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 23 ~~~~~~~~D~~~~-------~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.++..+..|++.+ +.+..++ ..+|+++|+|+...
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~-------~~vD~ViH~AA~v~ 124 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMW-------KEIDIVVNLAATTN 124 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHH-------hCCCEEEECccccC
Confidence 4688899999843 2222322 24899999998764
No 276
>KOG1502|consensus
Probab=86.59 E-value=1.5 Score=26.52 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=34.5
Q ss_pred ccchhhHHH--HHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 3 CRDLGKANG--VRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 3 ~r~~~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
-|+++..+. ...+++.. +.+...+..|+.+++++...++ ..|+++|.|....
T Consensus 37 VR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~-------gcdgVfH~Asp~~ 90 (327)
T KOG1502|consen 37 VRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAID-------GCDGVFHTASPVD 90 (327)
T ss_pred EcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHh-------CCCEEEEeCccCC
Confidence 355554333 24444433 4458889999999988776663 3899999997654
No 277
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=86.25 E-value=1.3 Score=26.72 Aligned_cols=34 Identities=12% Similarity=0.022 Sum_probs=26.8
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+.++..|+.|.+.+.+++++. .+|.++|-||...
T Consensus 46 ~~f~~gDi~D~~~L~~vf~~~-----~idaViHFAa~~~ 79 (329)
T COG1087 46 FKFYEGDLLDRALLTAVFEEN-----KIDAVVHFAASIS 79 (329)
T ss_pred CceEEeccccHHHHHHHHHhc-----CCCEEEECccccc
Confidence 467889999988777777553 7999999998643
No 278
>KOG3191|consensus
Probab=85.63 E-value=4.7 Score=22.73 Aligned_cols=14 Identities=21% Similarity=0.188 Sum_probs=11.4
Q ss_pred CCcceEEEcccCCC
Q psy13141 50 KHIHVLINNAGQGG 63 (84)
Q Consensus 50 ~~id~lv~~ag~~~ 63 (84)
+++|+++.|-.+..
T Consensus 109 ~~VDvLvfNPPYVp 122 (209)
T KOG3191|consen 109 ESVDVLVFNPPYVP 122 (209)
T ss_pred CCccEEEECCCcCc
Confidence 67999999988754
No 279
>PLN02503 fatty acyl-CoA reductase 2
Probab=84.41 E-value=1.8 Score=28.44 Aligned_cols=52 Identities=17% Similarity=0.316 Sum_probs=29.8
Q ss_pred ceeEEEEeecCCHH-HH-HHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhcccee
Q psy13141 23 HQVVVKKLDLASLD-SV-REFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 23 ~~~~~~~~D~~~~~-~~-~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~ 82 (84)
.++..+..|++++. .+ ....+.+. ..+|+++|+|+..... +.+...+++|+.
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~---~~vDiVIH~AA~v~f~-----~~~~~a~~vNV~ 245 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIA---KEVDVIINSAANTTFD-----ERYDVAIDINTR 245 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHH---hcCCEEEECccccccc-----cCHHHHHHHHHH
Confidence 36888999999872 00 01112222 2489999999875411 234445555543
No 280
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=84.32 E-value=1.4 Score=26.28 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=22.3
Q ss_pred eeEEEEeecC-CHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLA-SLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+.++.+|+. +.+.+..++ ..+|++||.|+...
T Consensus 47 ~~~~~~~Dl~~~~~~~~~~~-------~~~d~ViH~aa~~~ 80 (347)
T PRK11908 47 RMHFFEGDITINKEWIEYHV-------KKCDVILPLVAIAT 80 (347)
T ss_pred CeEEEeCCCCCCHHHHHHHH-------cCCCEEEECcccCC
Confidence 4777888997 544443322 25899999998654
No 281
>PF08883 DOPA_dioxygen: Dopa 4,5-dioxygenase family; InterPro: IPR014980 This family of proteins is related to P87064 from SWISSPROT a DOPA 4,5-dioxygenase that is involved in synthesis of betalain. DOPA-dioxygenase is the key enzyme involved in betalain biosynthesis. It converts 3,4-dihydroxyphenylalanine to betalamic acid, a yellow chromophore. ; PDB: 2NYH_A 2P8I_C.
Probab=83.86 E-value=4.1 Score=20.54 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=24.7
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcc
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 59 (84)
-.+++++ .++...+++..+...-|.++++||--
T Consensus 46 ~~~ev~f-~~~~f~~~v~Wl~~nrg~LsVLiHP~ 78 (104)
T PF08883_consen 46 WSFEVDF-PPEQFAEVVPWLMLNRGGLSVLIHPN 78 (104)
T ss_dssp EEEEEEE--HHHHHHHHHHHHHH-TT--EEEEEE
T ss_pred ceEEEEc-CHHHHHHHHHHHHHhCCCceEEEcCC
Confidence 4577888 78999999999998889999999864
No 282
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=83.25 E-value=5.9 Score=21.97 Aligned_cols=52 Identities=12% Similarity=0.105 Sum_probs=29.1
Q ss_pred HHHHHHHHhhcCCceeEEEEeecCC--H--------HHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 10 NGVRESIITKTNNHQVVVKKLDLAS--L--------DSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~D~~~--~--------~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+.+++... |..++++....+- + ++..++.+.+.+....-|++|++|++.-
T Consensus 33 ~~lA~~~~~~--Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 33 AALAEEAARR--GAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp HHHHHHHHHT--T-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred HHHHHHHHHC--CCEEEEEecCccccccccceEEEecchhhhhhhhccccCcceeEEEecchhh
Confidence 4455555555 5566665544321 1 4566677777776666799999998764
No 283
>KOG2336|consensus
Probab=82.51 E-value=7.9 Score=23.41 Aligned_cols=53 Identities=8% Similarity=0.271 Sum_probs=40.1
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhc---C-CcceEEEccc
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEE---K-HIHVLINNAG 60 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~---~-~id~lv~~ag 60 (84)
+.+.+...+...+|+..+.....+++..+.++.|.+.+.+.. | ++|.+..|.-
T Consensus 136 Kv~AA~~TL~~iNPDV~iE~hn~NITTvenFd~F~~~is~g~~~~gkpvDLVLSCVD 192 (422)
T KOG2336|consen 136 KVDAAVQTLAEINPDVVIEVHNYNITTVENFDTFTDRISNGSLCPGKPVDLVLSCVD 192 (422)
T ss_pred HHHHHHHHHHhcCCCeEEEEeecceeeehhHHHHHHHhhcCCCCCCCcceEEeeehh
Confidence 345556666666777778888999999999999999998742 2 4888777763
No 284
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=81.83 E-value=6.6 Score=21.53 Aligned_cols=50 Identities=16% Similarity=0.149 Sum_probs=29.6
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
++|+.++++++.+.+...+ + .....+|..+.+++.+.+ ...|++|++...
T Consensus 58 ~~R~~~~~~~l~~~l~~~~-~--~~~~~~~~~~~~~~~~~~-------~~~diVi~at~~ 107 (194)
T cd01078 58 VGRDLERAQKAADSLRARF-G--EGVGAVETSDDAARAAAI-------KGADVVFAAGAA 107 (194)
T ss_pred EcCCHHHHHHHHHHHHhhc-C--CcEEEeeCCCHHHHHHHH-------hcCCEEEECCCC
Confidence 4677777777777665433 2 234456777766655444 245777766543
No 285
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=81.61 E-value=2 Score=25.13 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=19.3
Q ss_pred eecCCHHHHHHHHHHHHh--hcCCcceEEEcccCCC
Q psy13141 30 LDLASLDSVREFAAQILD--EEKHIHVLINNAGQGG 63 (84)
Q Consensus 30 ~D~~~~~~~~~~~~~~~~--~~~~id~lv~~ag~~~ 63 (84)
+|+.+..+...++..+.+ .++++|++||+||...
T Consensus 45 ~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~ 80 (308)
T PRK11150 45 LDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSS 80 (308)
T ss_pred hhhhhhhhHHHHHHHHhcccccCCccEEEECceecC
Confidence 344444444444444332 2357999999998643
No 286
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=80.70 E-value=12 Score=23.69 Aligned_cols=62 Identities=15% Similarity=0.153 Sum_probs=44.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhh--cCCcceEEEcccCCC
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDE--EKHIHVLINNAGQGG 63 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~id~lv~~ag~~~ 63 (84)
++.+-...+++...+...+|..++..+.+-+.=......++..+... .+.+|++|-.-|-+.
T Consensus 136 ts~~~aa~~D~~~~~~~r~p~~~~~~~~~~vQG~~a~~~i~~al~~~~~~~~~dviii~RGGGs 199 (432)
T TIGR00237 136 TSQTGAALADILHILKRRDPSLKVVIYPTLVQGEGAVQSIVESIELANTKNECDVLIVGRGGGS 199 (432)
T ss_pred eCCccHHHHHHHHHHHhhCCCceEEEecccccCccHHHHHHHHHHHhhcCCCCCEEEEecCCCC
Confidence 45666677888888888887777877777776666666666666542 245899888877543
No 287
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=80.01 E-value=10 Score=22.64 Aligned_cols=62 Identities=6% Similarity=0.115 Sum_probs=41.9
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhc--C---CcceEEEcccCCC
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEE--K---HIHVLINNAGQGG 63 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~---~id~lv~~ag~~~ 63 (84)
++.+-....++...+...+|...+..+.+-+.=.....+++..+.... + .+|++|-.-|-+.
T Consensus 21 Ts~~gAa~~D~~~~~~~r~~~~~~~~~p~~vQG~~A~~~I~~al~~~~~~~~~~~~Dviii~RGGGs 87 (319)
T PF02601_consen 21 TSPTGAAIQDFLRTLKRRNPIVEIILYPASVQGEGAAASIVSALRKANEMGQADDFDVIIIIRGGGS 87 (319)
T ss_pred eCCchHHHHHHHHHHHHhCCCcEEEEEeccccccchHHHHHHHHHHHHhccccccccEEEEecCCCC
Confidence 455666778888888888877778887777744445555555554432 2 5899988877654
No 288
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=79.50 E-value=2.1 Score=24.57 Aligned_cols=16 Identities=25% Similarity=0.167 Sum_probs=12.3
Q ss_pred hcCCcceEEEcccCCC
Q psy13141 48 EEKHIHVLINNAGQGG 63 (84)
Q Consensus 48 ~~~~id~lv~~ag~~~ 63 (84)
....+|++||++|...
T Consensus 54 ~~~~~D~Vvh~a~~~~ 69 (292)
T TIGR01777 54 ALEGADAVINLAGEPI 69 (292)
T ss_pred hcCCCCEEEECCCCCc
Confidence 4457999999998643
No 289
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=79.49 E-value=1.4 Score=25.60 Aligned_cols=32 Identities=31% Similarity=0.295 Sum_probs=18.3
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+.+|+.+.+...... +... |.++|+|+...
T Consensus 45 ~~~~~d~~~~~~~~~~~----~~~~--d~vih~aa~~~ 76 (314)
T COG0451 45 EFVVLDLTDRDLVDELA----KGVP--DAVIHLAAQSS 76 (314)
T ss_pred ceeeecccchHHHHHHH----hcCC--CEEEEccccCc
Confidence 44566766653322222 2111 99999998765
No 290
>PRK05865 hypothetical protein; Provisional
Probab=79.32 E-value=4.8 Score=27.71 Aligned_cols=33 Identities=15% Similarity=0.075 Sum_probs=25.3
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+..+.+|+.+.+++.++++ .+|++||+|+...
T Consensus 41 ~v~~v~gDL~D~~~l~~al~-------~vD~VVHlAa~~~ 73 (854)
T PRK05865 41 SADFIAADIRDATAVESAMT-------GADVVAHCAWVRG 73 (854)
T ss_pred CceEEEeeCCCHHHHHHHHh-------CCCEEEECCCccc
Confidence 35677899999888776653 4899999998643
No 291
>PLN02686 cinnamoyl-CoA reductase
Probab=78.94 E-value=4 Score=24.81 Aligned_cols=31 Identities=10% Similarity=0.037 Sum_probs=22.7
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.+..+.+|+++.+++.++++. +|.++|.++.
T Consensus 108 ~~~~v~~Dl~d~~~l~~~i~~-------~d~V~hlA~~ 138 (367)
T PLN02686 108 GIWTVMANLTEPESLHEAFDG-------CAGVFHTSAF 138 (367)
T ss_pred ceEEEEcCCCCHHHHHHHHHh-------ccEEEecCee
Confidence 477888999999888777653 4566666654
No 292
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=78.82 E-value=8.6 Score=21.03 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=25.7
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.+..+.+|=.++++++++++.+++..++ +.+..+|-
T Consensus 100 g~d~I~lD~~~~~~~~~~v~~l~~~~~~--v~ie~SGG 135 (169)
T PF01729_consen 100 GADIIMLDNMSPEDLKEAVEELRELNPR--VKIEASGG 135 (169)
T ss_dssp T-SEEEEES-CHHHHHHHHHHHHHHTTT--SEEEEESS
T ss_pred CCCEEEecCcCHHHHHHHHHHHhhcCCc--EEEEEECC
Confidence 3667889999999999999998777665 44445553
No 293
>PF01220 DHquinase_II: Dehydroquinase class II; InterPro: IPR001874 3-dehydroquinate dehydratase (4.2.1.10 from EC), or dehydroquinase, catalyzes the conversion of 3-dehydroquinate into 3-dehydroshikimate. It is the third step in the shikimate pathway for the biosynthesis of aromatic amino acids from chorismate. Two classes of dehydroquinases exist, known as types I and II. Class-II enzymes are homododecameric enzymes of about 17 kDa. They are found in some bacteria such as actinomycetales [, ] and some fungi where they act in a catabolic pathway that allows the use of quinic acid as a carbon source.; GO: 0003855 3-dehydroquinate dehydratase activity; PDB: 3N8K_J 3N7A_I 3N87_F 3N8N_H 3N86_N 1H0S_A 3N59_J 1H05_A 1H0R_A 2Y71_A ....
Probab=78.46 E-value=8.2 Score=20.58 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhcC--CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 9 ANGVRESIITKTN--NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 9 ~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
++++.+.+++... +..+.+.+.+ .-.++++++.+.....|++|-|+|..
T Consensus 27 l~~i~~~~~~~a~~~g~~v~~~QSN-----~EGelid~I~~a~~~~dgiIINpga~ 77 (140)
T PF01220_consen 27 LEDIEQKCKETAAELGVEVEFFQSN-----HEGELIDWIHEARDDVDGIIINPGAY 77 (140)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEE-S-----SHHHHHHHHHHHTCTTSEEEEE-GGG
T ss_pred HHHHHHHHHHHHHHCCCeEEEEecC-----CHHHHHHHHHHHHhhCCEEEEccchh
Confidence 4444444444321 4456666654 34678899988887899988888754
No 294
>CHL00194 ycf39 Ycf39; Provisional
Probab=78.32 E-value=6.3 Score=23.32 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=23.0
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.+..+.+|+.+++++...+ ..+|.++|.++.
T Consensus 44 ~v~~v~~Dl~d~~~l~~al-------~g~d~Vi~~~~~ 74 (317)
T CHL00194 44 GAELVYGDLSLPETLPPSF-------KGVTAIIDASTS 74 (317)
T ss_pred CCEEEECCCCCHHHHHHHH-------CCCCEEEECCCC
Confidence 4677889999988765554 247999998764
No 295
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=78.03 E-value=6.8 Score=22.27 Aligned_cols=34 Identities=12% Similarity=0.195 Sum_probs=21.6
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
.+.++.+|+.+.. ..+.+.+ ...+|.+|+++|..
T Consensus 63 ~~~~~~~Dl~d~~--~~l~~~~---~~~~d~vi~~~g~~ 96 (251)
T PLN00141 63 SLQIVRADVTEGS--DKLVEAI---GDDSDAVICATGFR 96 (251)
T ss_pred ceEEEEeeCCCCH--HHHHHHh---hcCCCEEEECCCCC
Confidence 5778889998731 1222222 13689999999864
No 296
>KOG1431|consensus
Probab=77.98 E-value=2.6 Score=24.65 Aligned_cols=47 Identities=23% Similarity=0.288 Sum_probs=31.1
Q ss_pred EeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC-Cc--ccCChhhhhhhhccc
Q psy13141 29 KLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG-IL--NRITKDGLQLGMQID 80 (84)
Q Consensus 29 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~-~~--~~~~~~~~~~~~~~n 80 (84)
.+|+++..+.+++++.. .+-.+||-|+..+ .+ ..-..+-|+..+++|
T Consensus 38 d~DLt~~a~t~~lF~~e-----kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in 87 (315)
T KOG1431|consen 38 DADLTNLADTRALFESE-----KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN 87 (315)
T ss_pred cccccchHHHHHHHhcc-----CCceeeehHhhhcchhhcCCCchHHHhhcceec
Confidence 58999999988888664 3556677777655 22 234456666666655
No 297
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=76.79 E-value=16 Score=23.01 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=43.1
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcC-CcceEEEcccCCC
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEK-HIHVLINNAGQGG 63 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~lv~~ag~~~ 63 (84)
++.+-...+++...+...+|...+..+.+-+.=..+..+++..+..... .+|++|-.-|-+.
T Consensus 142 Ts~~gAa~~D~~~~~~~r~p~~~~~~~~~~vQG~~A~~~i~~al~~~~~~~~Dviii~RGGGS 204 (438)
T PRK00286 142 TSPTGAAIRDILTVLRRRFPLVEVIIYPTLVQGEGAAASIVAAIERANARGEDVLIVARGGGS 204 (438)
T ss_pred eCCccHHHHHHHHHHHhcCCCCeEEEecCcCcCccHHHHHHHHHHHhcCCCCCEEEEecCCCC
Confidence 4556667788888888888777777777766666666666666654322 2799888877643
No 298
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=76.73 E-value=3.4 Score=27.23 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=22.4
Q ss_pred eeEEEEeecCCHHH-HHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDS-VREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~-~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
++.++.+|+++... +.+++ ..+|++||.||...
T Consensus 361 ~~~~~~gDl~d~~~~l~~~l-------~~~D~ViHlAa~~~ 394 (660)
T PRK08125 361 RFHFVEGDISIHSEWIEYHI-------KKCDVVLPLVAIAT 394 (660)
T ss_pred ceEEEeccccCcHHHHHHHh-------cCCCEEEECccccC
Confidence 46677889987554 22222 25899999998765
No 299
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=76.49 E-value=4.4 Score=23.98 Aligned_cols=38 Identities=11% Similarity=0.150 Sum_probs=23.3
Q ss_pred ceeEEEEeecCCHHH-H-HHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 23 HQVVVKKLDLASLDS-V-REFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.++..+.+|++++.- + ......+ ...+|.+|||||...
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~---~~~~d~vih~a~~~~ 100 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERL---AENVDTIVHNGALVN 100 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHH---HhhCCEEEeCCcEec
Confidence 368888999886520 0 0111222 246999999998653
No 300
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=76.49 E-value=9.8 Score=20.45 Aligned_cols=50 Identities=10% Similarity=0.096 Sum_probs=32.2
Q ss_pred hHHHHHHHHHhhcC--CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 8 KANGVRESIITKTN--NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 8 ~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
.++++.+.+++... +..+.++|.+ .-.++++.+.+..+..|++|-|+|..
T Consensus 27 tl~~i~~~~~~~a~~~g~~v~~~QSN-----~EGelId~I~~a~~~~dgiiINpga~ 78 (146)
T PRK05395 27 TLADIEALLEEEAAELGVELEFFQSN-----HEGELIDRIHEARDGADGIIINPGAY 78 (146)
T ss_pred CHHHHHHHHHHHHHHcCCEEEEEeeC-----cHHHHHHHHHhcccCCcEEEECchHH
Confidence 35555555554321 4456666654 34678888888777889988888753
No 301
>PF06956 RtcR: Regulator of RNA terminal phosphate cyclase; InterPro: IPR009715 RtcR is a sigma54-dependent enhancer binding protein [] that activates transcription of the rtcBA operon. The product of the rtcA gene is an RNA 3 -terminal phosphate cyclase []. This domain is found at the N terminus of the RtcR sequence. RtcR, and other sigma54-dependent activators, contain IPR002078 from INTERPRO in the central region of the protein sequence.
Probab=75.89 E-value=11 Score=20.93 Aligned_cols=53 Identities=21% Similarity=0.173 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhh---cC----CcceEEEc
Q psy13141 6 LGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDE---EK----HIHVLINN 58 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~---~~----~id~lv~~ 58 (84)
..-++.+.+.+....|..++.....++.++=++++....+... +. .-+++||-
T Consensus 52 ~~LA~~v~~Di~~vSP~TeV~~~~v~l~dPWDfeeVY~~l~dfa~~Y~Fd~e~E~YlvHI 111 (183)
T PF06956_consen 52 RALAEQVRRDIAQVSPETEVRLHEVELADPWDFEEVYAALHDFARGYPFDPENEDYLVHI 111 (183)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEeccCCCccHHHHHHHHHHHHhhCCCCCCCCceEEEe
Confidence 3455677888888888889999999999998887777666542 21 24567764
No 302
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=74.49 E-value=11 Score=20.10 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=31.3
Q ss_pred hHHHHHHHHHhhcC--CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 8 KANGVRESIITKTN--NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 8 ~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.++++.+.+++... +..+.+.|.+ .-.++++.+.+..+..|++|-|+|.
T Consensus 25 tl~~i~~~l~~~a~~~g~~v~~~QSN-----~Egelid~I~~a~~~~dgiIINpga 75 (140)
T cd00466 25 TLADIEALLRELAAELGVEVEFFQSN-----HEGELIDWIHEARDGADGIIINPGA 75 (140)
T ss_pred CHHHHHHHHHHHHHHcCCEEEEEeeC-----cHHHHHHHHHHhhccCcEEEEcchH
Confidence 34555555554432 4456666654 3366788888877778988888874
No 303
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=73.65 E-value=12 Score=20.12 Aligned_cols=49 Identities=12% Similarity=0.142 Sum_probs=30.5
Q ss_pred hHHHHHHHHHhhcC--CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 8 KANGVRESIITKTN--NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 8 ~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.++++.+.+++... +..+.++|.+ .-.++++.+.+.....|++|-|+|.
T Consensus 27 tl~~i~~~~~~~a~~~g~~~~~~QSN-----~EGelId~i~~a~~~~dgiIINpga 77 (146)
T PRK13015 27 TLADVEALCRAAAEALGLEVEFRQSN-----HEGELIDWIHEARGDVAGIVINPGA 77 (146)
T ss_pred CHHHHHHHHHHHHHHcCCEEEEEeeC-----cHHHHHHHHHHhhhcCCEEEEcchH
Confidence 34555555554432 4456665654 3356788888776678888888774
No 304
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=71.94 E-value=17 Score=21.15 Aligned_cols=56 Identities=9% Similarity=0.025 Sum_probs=28.1
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
+-+++.++++.+.++..+ +.++....----++++.+++++.|.+. ..|+++..-|.
T Consensus 112 G~~~~v~~~a~~~l~~~y-~l~i~g~~~Gyf~~~e~~~i~~~I~~s--~~dil~VglG~ 167 (243)
T PRK03692 112 GGKPEVLAQTEAKLRTQW-NVNIVGSQDGYFTPEQRQALFERIHAS--GAKIVTVAMGS 167 (243)
T ss_pred CCCHHHHHHHHHHHHHHh-CCEEEEEeCCCCCHHHHHHHHHHHHhc--CCCEEEEECCC
Confidence 344555666666666665 444332221222344445555665543 45666555544
No 305
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=71.83 E-value=13 Score=19.84 Aligned_cols=49 Identities=20% Similarity=0.188 Sum_probs=31.1
Q ss_pred hHHHHHHHHHhhcC--CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 8 KANGVRESIITKTN--NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 8 ~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.++++.+.+++... +..+.+.|.+ .-.++++.+.+..+..|++|-|+|.
T Consensus 25 tl~di~~~~~~~a~~~g~~v~~~QSN-----~EGelId~i~~a~~~~dgiIINpga 75 (141)
T TIGR01088 25 TLEEIVEIIETFAAQLNVELEFFQSN-----SEGQLIDKIHEAEGQYDGIIINPGA 75 (141)
T ss_pred CHHHHHHHHHHHHHHcCCEEEEEeeC-----cHHHHHHHHHhccccCCEEEEcChH
Confidence 35555555555432 4455555544 3467888888877778888888774
No 306
>KOG3923|consensus
Probab=71.40 E-value=10 Score=23.15 Aligned_cols=14 Identities=29% Similarity=0.560 Sum_probs=11.8
Q ss_pred CCcceEEEcccCCC
Q psy13141 50 KHIHVLINNAGQGG 63 (84)
Q Consensus 50 ~~id~lv~~ag~~~ 63 (84)
...|++|||+|...
T Consensus 182 ~~~DVivNCtGL~a 195 (342)
T KOG3923|consen 182 PEYDVIVNCTGLGA 195 (342)
T ss_pred CCCcEEEECCcccc
Confidence 46899999999865
No 307
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=71.26 E-value=19 Score=21.29 Aligned_cols=65 Identities=9% Similarity=0.128 Sum_probs=37.5
Q ss_pred HHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhcc
Q psy13141 10 NGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQI 79 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~ 79 (84)
.-+.+.+... |..+.....= .|+..++.+.++....+.|++|.+-|...-.+++|.+.+-+.+..
T Consensus 24 ~~la~~L~~~--G~~v~~~~~V---gD~~~~I~~~l~~a~~r~D~vI~tGGLGPT~DDiT~e~vAka~g~ 88 (255)
T COG1058 24 AFLADELTEL--GVDLARITTV---GDNPDRIVEALREASERADVVITTGGLGPTHDDLTAEAVAKALGR 88 (255)
T ss_pred HHHHHHHHhc--CceEEEEEec---CCCHHHHHHHHHHHHhCCCEEEECCCcCCCccHhHHHHHHHHhCC
Confidence 3455556555 5444443332 234455555666555668998888877544556666666555544
No 308
>KOG1430|consensus
Probab=69.61 E-value=7.8 Score=23.98 Aligned_cols=52 Identities=17% Similarity=0.190 Sum_probs=28.3
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhccceec
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~n~~~ 83 (84)
...+.+.++|+.+...+...+ ... .+||+|+...+ ..-..+-+..+++|+.|
T Consensus 54 ~~~v~~~~~D~~~~~~i~~a~-------~~~-~Vvh~aa~~~~--~~~~~~~~~~~~vNV~g 105 (361)
T KOG1430|consen 54 SGRVTVILGDLLDANSISNAF-------QGA-VVVHCAASPVP--DFVENDRDLAMRVNVNG 105 (361)
T ss_pred CCceeEEecchhhhhhhhhhc-------cCc-eEEEeccccCc--cccccchhhheeecchh
Confidence 345677778877765554433 334 66777755332 12222445566666654
No 309
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=69.03 E-value=21 Score=21.05 Aligned_cols=57 Identities=12% Similarity=0.092 Sum_probs=34.0
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEE-eecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKK-LDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+-.++.++++.+.+++.+|+..+.... .=++..++ +.+++.|... ..|++...-|..
T Consensus 115 Ggkp~V~~~a~~~l~~~~p~l~ivg~h~GYf~~~e~-~~i~~~I~~s--~pdil~VgmG~P 172 (253)
T COG1922 115 GGKPGVAEQAAAKLRAKYPGLKIVGSHDGYFDPEEE-EAIVERIAAS--GPDILLVGMGVP 172 (253)
T ss_pred cCCHHHHHHHHHHHHHHCCCceEEEecCCCCChhhH-HHHHHHHHhc--CCCEEEEeCCCc
Confidence 345567778888888888765555443 22333344 5666666543 467766555543
No 310
>KOG0092|consensus
Probab=68.85 E-value=19 Score=20.43 Aligned_cols=40 Identities=10% Similarity=0.173 Sum_probs=29.5
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhh--cCCcceEEEcccC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDE--EKHIHVLINNAGQ 61 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~--~~~id~lv~~ag~ 61 (84)
+.++-.+..|+++.+++.++-.++++- ..+.++++--+|.
T Consensus 77 gA~AAivvYDit~~~SF~~aK~WvkeL~~~~~~~~vialvGN 118 (200)
T KOG0092|consen 77 GANAAIVVYDITDEESFEKAKNWVKELQRQASPNIVIALVGN 118 (200)
T ss_pred CCcEEEEEEecccHHHHHHHHHHHHHHHhhCCCCeEEEEecc
Confidence 667778888999999988877777763 2357777766664
No 311
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=68.56 E-value=6.6 Score=23.62 Aligned_cols=59 Identities=10% Similarity=0.047 Sum_probs=37.3
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcC--------------CcceEEEcccCC---CCcccCChhhhhhhhcccee
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEK--------------HIHVLINNAGQG---GILNRITKDGLQLGMQIDQS 82 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~--------------~id~lv~~ag~~---~~~~~~~~~~~~~~~~~n~~ 82 (84)
.+..+..|..++.++...+..+.+... .+..++.--... +|.+.++.+.|.+.++.|+.
T Consensus 51 dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll 126 (299)
T PF08643_consen 51 DIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLL 126 (299)
T ss_pred CCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 477777888777666666666665433 233444333322 25668889999998887764
No 312
>COG0757 AroQ 3-dehydroquinate dehydratase II [Amino acid transport and metabolism]
Probab=68.30 E-value=9.4 Score=20.40 Aligned_cols=49 Identities=10% Similarity=0.142 Sum_probs=25.8
Q ss_pred HHHHHHHHHhhcC--CceeEEEEeecCCHHHHHHHHHHHHhhcCC-cceEEEcccCC
Q psy13141 9 ANGVRESIITKTN--NHQVVVKKLDLASLDSVREFAAQILDEEKH-IHVLINNAGQG 62 (84)
Q Consensus 9 ~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-id~lv~~ag~~ 62 (84)
++++.+.++.... +..+.+.|.+ .-.++++++.+..+. .++++|.+++.
T Consensus 27 l~di~~~~~~~a~~~g~~v~~~QSN-----~Eg~Lid~Ihea~~~~~~IvINpga~T 78 (146)
T COG0757 27 LEDIEADLEEEAAKLGVEVEFRQSN-----HEGELIDWIHEARGKAGDIVINPGAYT 78 (146)
T ss_pred HHHHHHHHHHHHHHcCceEEEEecC-----chHHHHHHHHHhhccCCeEEEcCccch
Confidence 4444444443321 4445555543 335678888877665 44555555543
No 313
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=67.50 E-value=11 Score=19.59 Aligned_cols=14 Identities=21% Similarity=0.387 Sum_probs=9.6
Q ss_pred CCcceEEEcccCCC
Q psy13141 50 KHIHVLINNAGQGG 63 (84)
Q Consensus 50 ~~id~lv~~ag~~~ 63 (84)
...|++|++.+...
T Consensus 74 ~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 74 QEADIVINATPSGM 87 (135)
T ss_dssp HTESEEEE-SSTTS
T ss_pred hhCCeEEEecCCCC
Confidence 35899999987654
No 314
>KOG1221|consensus
Probab=66.75 E-value=5.6 Score=25.47 Aligned_cols=40 Identities=15% Similarity=0.121 Sum_probs=24.0
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.++..+..|+++++---.. .........+++++|+|+..+
T Consensus 79 ~Kv~pi~GDi~~~~LGis~-~D~~~l~~eV~ivih~AAtvr 118 (467)
T KOG1221|consen 79 EKVVPIAGDISEPDLGISE-SDLRTLADEVNIVIHSAATVR 118 (467)
T ss_pred ecceeccccccCcccCCCh-HHHHHHHhcCCEEEEeeeeec
Confidence 4577788888776421110 111122347999999998765
No 315
>cd00458 SugarP_isomerase SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium, the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate. 6PGL converts 6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the second step of the oxidative phase of the pentose phosphate pathway.
Probab=61.95 E-value=13 Score=20.09 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=26.2
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEccc
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 60 (84)
.+++.+..+....+......+.+.+.++.+|+++-..|
T Consensus 86 ~~v~~~~~~~~~~~~a~~y~~~~~~~~~~~Dl~lLG~G 123 (169)
T cd00458 86 SNVHYVDTSLPIEKACEKYEREILDQVDAIDLAVDGAG 123 (169)
T ss_pred HHeecCCCCCCcHHHHHHHHHHHHhhCCCCCEEEECcC
Confidence 34555555556666666777767777788899887776
No 316
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=61.30 E-value=18 Score=19.87 Aligned_cols=27 Identities=15% Similarity=0.277 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHhhcCC--cceEEEcccCC
Q psy13141 36 DSVREFAAQILDEEKH--IHVLINNAGQG 62 (84)
Q Consensus 36 ~~~~~~~~~~~~~~~~--id~lv~~ag~~ 62 (84)
..+.+.++++++.++. +-++=||||..
T Consensus 62 ~~~~~~~~~l~~~~~~~~v~IvSNsaGs~ 90 (168)
T PF09419_consen 62 PEYAEWLNELKKQFGKDRVLIVSNSAGSS 90 (168)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCcc
Confidence 4566667777776654 44444555543
No 317
>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]
Probab=59.75 E-value=14 Score=21.52 Aligned_cols=36 Identities=14% Similarity=0.129 Sum_probs=26.9
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcc
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 59 (84)
.-.++.+|=.+.+++.+.++......+++.++|.+.
T Consensus 205 Gw~V~evdG~d~~~i~~a~~~~~~~~~rP~~IIa~T 240 (243)
T COG3959 205 GWEVIEVDGHDIEEIVEALEKAKGSKGRPTVIIAKT 240 (243)
T ss_pred CceEEEEcCcCHHHHHHHHHhhhccCCCCeEEEEec
Confidence 456778888888888888888776555788887654
No 318
>KOG2672|consensus
Probab=59.44 E-value=25 Score=21.34 Aligned_cols=66 Identities=11% Similarity=0.048 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC---CcccCChhhhhhhh
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG---ILNRITKDGLQLGM 77 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~ 77 (84)
..+.++++.++...|..-+..+.-|++-.-.. ++.+.. ..+|++-||.-... ++..-.+..+++.+
T Consensus 175 ~HiAkTVq~iK~k~p~ilvE~L~pDF~Gd~~~---Ve~va~--SGLDV~AHNvETVe~Ltp~VRD~RA~yrQSL 243 (360)
T KOG2672|consen 175 NHIAKTVQKIKEKAPEILVECLTPDFRGDLKA---VEKVAK--SGLDVYAHNVETVEELTPFVRDPRANYRQSL 243 (360)
T ss_pred HHHHHHHHHHHhhCcccchhhcCccccCchHH---HHHHHh--cCccceecchhhHHhcchhhcCcccchHHhH
Confidence 45566777777776544455555566543332 333322 36888888876433 33333344444443
No 319
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=59.18 E-value=42 Score=21.54 Aligned_cols=36 Identities=17% Similarity=0.198 Sum_probs=29.7
Q ss_pred hcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcce
Q psy13141 19 KTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHV 54 (84)
Q Consensus 19 ~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 54 (84)
.+.+..+..+.+|..+.+.+.++++.+...||.+..
T Consensus 112 ~faGid~~pI~ld~~~~~ei~~~Vkal~p~FgginL 147 (432)
T COG0281 112 AFAGIDVLPIELDVGTNNEIIEFVKALEPTFGGINL 147 (432)
T ss_pred HhcCCCceeeEeeCCChHHHHHHHHHhhhcCCCcce
Confidence 334667888999999999999999999988886553
No 320
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=57.74 E-value=25 Score=19.27 Aligned_cols=34 Identities=18% Similarity=0.190 Sum_probs=22.6
Q ss_pred eecCCH--HHHHHHHHHHHhhcC-CcceEEEcccCCC
Q psy13141 30 LDLASL--DSVREFAAQILDEEK-HIHVLINNAGQGG 63 (84)
Q Consensus 30 ~D~~~~--~~~~~~~~~~~~~~~-~id~lv~~ag~~~ 63 (84)
.|...+ ..+.++++.+.+... .-.++|||.|-.+
T Consensus 81 ~D~~~p~~~~l~~~v~~i~~~~~~g~kVvVHC~~Gig 117 (180)
T COG2453 81 LDGTVPDLEDLDKIVDFIEEALSKGKKVVVHCQGGIG 117 (180)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhcCCeEEEEcCCCCc
Confidence 355544 667777777776542 3489999987544
No 321
>PF02515 CoA_transf_3: CoA-transferase family III; InterPro: IPR003673 CoA-transferases are found in organisms from all kingdoms of life. They catalyse reversible transfer reactions of coenzyme A groups from CoA-thioesters to free acids. There are at least three families of CoA-transferases, which differ in sequence and reaction mechanism: Family I consists of CoA-transferases for 3-oxoacids (2.8.3.5 from EC, 2.8.3.6 from EC), short-chain fatty acids (2.8.3.8 from EC, 2.8.3.9 from EC) and glutaconate (2.8.3.12 from EC). Most use succinyl-CoA or acetyl-CoA as CoA donors. Family II consists of the homodimeric alpha-subunits of citrate lyase and citramalate lyase (2.8.3.10 from EC, 2.8.3.11 from EC). These enzymes catalyse the transfer of acyl carrier protein (ACP) with a covalently bound CoA derivative, but can accept free CoA thioesters as well. Family III consists of formyl-CoA:oxalate CoA-transferase [], succinyl-CoA:(R)-benzylsuccinate CoA-transferase [], (E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase [], and butyrobetainyl-CoA:(R)-carnitine CoA-transferase []. These CoA-transferases occur in prokaryotes and eukaryotes, and catalyse CoA-transfer reactions in a highly substrate- and stereo-specific manner []. This entry represents family III CoA-transferases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1PT7_B 1PT8_A 1PQY_A 1Q7E_A 1Q6Y_A 1PT5_A 1XK6_B 1XK7_C 1XVT_A 1XVU_A ....
Probab=56.89 E-value=32 Score=19.01 Aligned_cols=11 Identities=36% Similarity=0.386 Sum_probs=5.0
Q ss_pred eecCCHHHHHH
Q psy13141 30 LDLASLDSVRE 40 (84)
Q Consensus 30 ~D~~~~~~~~~ 40 (84)
+|+.+++..+.
T Consensus 3 lDl~~~~gr~~ 13 (191)
T PF02515_consen 3 LDLKSPEGRAA 13 (191)
T ss_dssp EETTSHHHHHH
T ss_pred eeCcCHHHHHH
Confidence 45555444333
No 322
>COG0521 MoaB Molybdopterin biosynthesis enzymes [Coenzyme metabolism]
Probab=56.66 E-value=33 Score=19.00 Aligned_cols=66 Identities=14% Similarity=0.177 Sum_probs=34.3
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCC-cceEEEcccCCCCcccCChhhhhhhhc
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKH-IHVLINNAGQGGILNRITKDGLQLGMQ 78 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-id~lv~~ag~~~~~~~~~~~~~~~~~~ 78 (84)
....+.+.+++. +.++.....= +++..++.+.+.+.... .|+++-+-|......+.+++-.+..++
T Consensus 28 sG~~l~~~L~~a--g~~~~~~~iV---~D~~~~I~~~l~~~~~~~~DvvlttGGTG~t~RDvTpEA~~~~~d 94 (169)
T COG0521 28 SGPLLVELLEEA--GHNVAAYTIV---PDDKEQIRATLIALIDEDVDVVLTTGGTGITPRDVTPEATRPLFD 94 (169)
T ss_pred chhHHHHHHHHc--CCccceEEEe---CCCHHHHHHHHHHHhcCCCCEEEEcCCccCCCCcCCHHHHHHHHh
Confidence 345566666665 4444222222 22334444444443222 899888888765445666665555443
No 323
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=56.64 E-value=26 Score=17.95 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.+.+.+++.+++.+|..++..+..++. .+....++ ...|++|.+...
T Consensus 56 ~Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~-------~~~d~vi~~~d~ 102 (135)
T PF00899_consen 56 NKAEAAKERLQEINPDVEVEAIPEKID-EENIEELL-------KDYDIVIDCVDS 102 (135)
T ss_dssp BHHHHHHHHHHHHSTTSEEEEEESHCS-HHHHHHHH-------HTSSEEEEESSS
T ss_pred HHHHHHHHHHHHhcCceeeeeeecccc-cccccccc-------cCCCEEEEecCC
Confidence 466778888888888888888877773 33444443 246888877643
No 324
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=56.02 E-value=34 Score=21.64 Aligned_cols=44 Identities=11% Similarity=-0.011 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhcc
Q psy13141 36 DSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQI 79 (84)
Q Consensus 36 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~ 79 (84)
-+++.++..+.+.-.+--+|.|.+....-..+.+.++|.+.+++
T Consensus 157 ~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~ 200 (396)
T COG1448 157 LDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADL 200 (396)
T ss_pred ccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHH
Confidence 45667777776653333345565544333458889999988764
No 325
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=55.89 E-value=46 Score=20.52 Aligned_cols=41 Identities=7% Similarity=-0.014 Sum_probs=32.0
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+.-...+..|.-+.+--+..++.|+..+|.+|.+|..-+..
T Consensus 102 GlyAksingDaFS~e~k~kvIe~Ik~~~g~vDlvvYSlAsp 142 (398)
T COG3007 102 GLYAKSINGDAFSDEMKQKVIEAIKQDFGKVDLVVYSLASP 142 (398)
T ss_pred CceeeecccchhhHHHHHHHHHHHHHhhccccEEEEeccCc
Confidence 44456677788887878888899999999999998776543
No 326
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=55.58 E-value=55 Score=21.30 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=30.4
Q ss_pred HHHHHHHHhhcCCceeEEEEeecC----------CHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 10 NGVRESIITKTNNHQVVVKKLDLA----------SLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~D~~----------~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+.+.+... |..++.+..... ..++.+++.+.+.+.+. .|++|++|++.-
T Consensus 286 ~alA~aa~~~--GA~VtlI~Gp~~~~~p~~v~~i~V~ta~eM~~av~~~~~-~Di~I~aAAVaD 346 (475)
T PRK13982 286 FAIAAAAAAA--GAEVTLISGPVDLADPQGVKVIHVESARQMLAAVEAALP-ADIAIFAAAVAD 346 (475)
T ss_pred HHHHHHHHHC--CCcEEEEeCCcCCCCCCCceEEEecCHHHHHHHHHhhCC-CCEEEEeccccc
Confidence 3345555544 566666543211 22345666777766654 699999998754
No 327
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=54.51 E-value=31 Score=18.11 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=31.6
Q ss_pred HHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 12 VRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
+.+.+++. +.++.....=-.+.+.+.+.+... ..+.|++|-+-|......+.+.+-+.+..
T Consensus 32 l~~~l~~~--G~~v~~~~~v~Dd~~~i~~~l~~~---~~~~DliIttGG~g~g~~D~t~~ai~~~g 92 (144)
T TIGR00177 32 LAALLEEA--GFNVSRLGIVPDDPEEIREILRKA---VDEADVVLTTGGTGVGPRDVTPEALEELG 92 (144)
T ss_pred HHHHHHHC--CCeEEEEeecCCCHHHHHHHHHHH---HhCCCEEEECCCCCCCCCccHHHHHHHhC
Confidence 34444443 544444333223445555555443 33689988887765434455555555443
No 328
>PF14195 DUF4316: Domain of unknown function (DUF4316)
Probab=54.11 E-value=12 Score=17.44 Aligned_cols=14 Identities=29% Similarity=0.256 Sum_probs=11.0
Q ss_pred HHhhcCCcceEEEc
Q psy13141 45 ILDEEKHIHVLINN 58 (84)
Q Consensus 45 ~~~~~~~id~lv~~ 58 (84)
+...++-||+++||
T Consensus 12 ~EqNYnMIDGiiNN 25 (70)
T PF14195_consen 12 TEQNYNMIDGIINN 25 (70)
T ss_pred hhcccccccccccC
Confidence 33457789999999
No 329
>PF13348 Y_phosphatase3C: Tyrosine phosphatase family C-terminal region; PDB: 1YWF_A 2OZ5_B.
Probab=53.65 E-value=16 Score=16.36 Aligned_cols=24 Identities=4% Similarity=-0.000 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHHHhhcCCcceEE
Q psy13141 33 ASLDSVREFAAQILDEEKHIHVLI 56 (84)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~id~lv 56 (84)
.+++-+..+++.+.+.+|.++..+
T Consensus 26 ~~~e~l~~~l~~i~~~yGs~e~Yl 49 (68)
T PF13348_consen 26 VRPEYLEAALDAIDERYGSVENYL 49 (68)
T ss_dssp --HHHHHHHHHHHHHHHSSHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHH
Confidence 347889999999999999877543
No 330
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=53.20 E-value=30 Score=21.21 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=20.3
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
..+.+|+.+.+.+..++ ..+|++||.|+..
T Consensus 67 ~~~~~Dl~d~~~~~~~~-------~~~D~Vih~Aa~~ 96 (370)
T PLN02695 67 EFHLVDLRVMENCLKVT-------KGVDHVFNLAADM 96 (370)
T ss_pred eEEECCCCCHHHHHHHH-------hCCCEEEEccccc
Confidence 44567888766654443 2479999999864
No 331
>PRK08618 ornithine cyclodeaminase; Validated
Probab=52.39 E-value=51 Score=19.96 Aligned_cols=18 Identities=28% Similarity=0.311 Sum_probs=12.1
Q ss_pred CccchhhHHHHHHHHHhh
Q psy13141 2 ACRDLGKANGVRESIITK 19 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~ 19 (84)
++|+.++.+++.+++...
T Consensus 158 ~~r~~~~a~~~~~~~~~~ 175 (325)
T PRK08618 158 YSRTFEKAYAFAQEIQSK 175 (325)
T ss_pred ECCCHHHHHHHHHHHHHh
Confidence 567777777777766554
No 332
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=51.55 E-value=51 Score=19.73 Aligned_cols=43 Identities=16% Similarity=0.262 Sum_probs=33.1
Q ss_pred hhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhc
Q psy13141 6 LGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEE 49 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 49 (84)
...+++-.+.+.++. +.++.++..+-+..++++.+...+.+.+
T Consensus 48 ~~~Leq~l~~L~~kt-~~QiaVv~vpSt~g~~IE~ya~rlfd~W 90 (271)
T COG1512 48 RGALEQQLADLEQKT-GAQIAVVTVPSTGGETIEQYATRLFDKW 90 (271)
T ss_pred HHHHHHHHHHHHhcc-CCeEEEEEecCCCCCCHHHHHHHHHHhc
Confidence 455666666776665 6778888888888899999999988874
No 333
>COG1908 FrhD Coenzyme F420-reducing hydrogenase, delta subunit [Energy production and conversion]
Probab=50.34 E-value=37 Score=17.81 Aligned_cols=25 Identities=16% Similarity=0.104 Sum_probs=14.4
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHH
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQIL 46 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~ 46 (84)
+.++..+....++-+.+...+...-
T Consensus 94 ~eRv~~~wiSa~E~ekf~e~~~efv 118 (132)
T COG1908 94 PERVRVLWISAAEGEKFAETINEFV 118 (132)
T ss_pred cceEEEEEEehhhHHHHHHHHHHHH
Confidence 4567777666666655554444443
No 334
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=49.88 E-value=53 Score=19.52 Aligned_cols=18 Identities=11% Similarity=0.152 Sum_probs=10.4
Q ss_pred CccchhhHHHHHHHHHhh
Q psy13141 2 ACRDLGKANGVRESIITK 19 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~ 19 (84)
++|+.++.+.+.+.+...
T Consensus 157 ~nR~~~ka~~la~~l~~~ 174 (284)
T PRK12549 157 FDVDPARAAALADELNAR 174 (284)
T ss_pred ECCCHHHHHHHHHHHHhh
Confidence 456666666666665544
No 335
>PF07005 DUF1537: Protein of unknown function, DUF1537; InterPro: IPR010737 This entry represents a conserved region found in a range of Proteobacteria as well as the Gram-positive Oceanobacillus iheyensis. This entry includes YgbK from Escherichia coli, which is dependent upon FlhDC, the master regulator of the flagellar genes. The ygbK gene appears to be regulated by sigmaF [].; PDB: 3DQQ_B 1YZY_B.
Probab=49.81 E-value=46 Score=18.72 Aligned_cols=36 Identities=14% Similarity=0.315 Sum_probs=24.2
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
..++.+|..+.+++..+.+.+.+...+. +++-++|.
T Consensus 33 ~~ivV~Da~t~~DL~~ia~a~~~~~~~~-l~vGsagl 68 (223)
T PF07005_consen 33 ARIVVFDAETDEDLDAIAEALLELGRRV-LWVGSAGL 68 (223)
T ss_dssp ECEEEE-BSSCHHHHHHHHHCTT-S----EEEESCHH
T ss_pred CcEEEEecCCHHHHHHHHHHHHhCCCce-EEecchHH
Confidence 3677789999999999998887654333 66666665
No 336
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=49.54 E-value=58 Score=19.79 Aligned_cols=52 Identities=13% Similarity=0.171 Sum_probs=35.6
Q ss_pred HHHHHHHHhhcCCce-eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 10 NGVRESIITKTNNHQ-VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.++.+.+... +.. ++.+..+-.+.+..+++.+.+.+.++.+++-++..|...
T Consensus 253 ~~ll~~l~~~--~~elvTi~~G~~~~~~~a~~l~~~l~~~~p~~eve~~~GgQ~~ 305 (313)
T PF13684_consen 253 KKLLEKLLDE--DGELVTIYYGEDVSEEEAEALAEFLEEKYPDVEVEVYDGGQPL 305 (313)
T ss_pred HHHHHHhhcc--CCeEEEEEecCCCCHHHHHHHHHHHHHHhCCeEEEEEECCCcc
Confidence 4444444333 333 555666666667889999999999988998888877543
No 337
>PRK08385 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=49.36 E-value=57 Score=19.59 Aligned_cols=37 Identities=22% Similarity=0.224 Sum_probs=26.5
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
+..+.+|=-+++.++++++.+++...+..+.+..+|-
T Consensus 203 aDiI~LDn~~~e~l~~~v~~l~~~~~~~~~~leaSGG 239 (278)
T PRK08385 203 ADIIMLDNMTPEEIREVIEALKREGLRERVKIEVSGG 239 (278)
T ss_pred cCEEEECCCCHHHHHHHHHHHHhcCcCCCEEEEEECC
Confidence 4578899999999999999887654334455555543
No 338
>PRK15408 autoinducer 2-binding protein lsrB; Provisional
Probab=48.84 E-value=60 Score=19.72 Aligned_cols=48 Identities=13% Similarity=0.198 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEc
Q psy13141 11 GVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINN 58 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 58 (84)
...+.+...+|+-.+......-.+.+.-.+..+.+.+.++.+++++.+
T Consensus 169 g~~~~l~~~~p~~~vv~~~~~~~d~~~a~~~~~~lL~~~pdi~aI~~~ 216 (336)
T PRK15408 169 EAKAKIAKEHPGWEIVTTQFGYNDATKSLQTAEGILKAYPDLDAIIAP 216 (336)
T ss_pred HHHHHHHhhCCCCEEEeecCCCCcHHHHHHHHHHHHHHCCCCcEEEEC
Confidence 344445455544433322222233444445566666667778887765
No 339
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=48.73 E-value=55 Score=19.24 Aligned_cols=12 Identities=0% Similarity=0.224 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHh
Q psy13141 36 DSVREFAAQILD 47 (84)
Q Consensus 36 ~~~~~~~~~~~~ 47 (84)
++..++++.+.+
T Consensus 53 ~Er~~l~~~~~~ 64 (284)
T cd00950 53 EEHEAVIEAVVE 64 (284)
T ss_pred HHHHHHHHHHHH
Confidence 334444444443
No 340
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=48.40 E-value=62 Score=19.80 Aligned_cols=24 Identities=17% Similarity=0.007 Sum_probs=15.7
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEe
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKL 30 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~ 30 (84)
.+.+.+.+.+++.+|..++..+..
T Consensus 55 ~Ka~aaa~~L~~iNP~v~v~~~~~ 78 (307)
T cd01486 55 PKAEAAAERLKEIFPSIDATGIVL 78 (307)
T ss_pred cHHHHHHHHHHHHCCCcEEEEeee
Confidence 355667777877777666655543
No 341
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=48.14 E-value=49 Score=18.60 Aligned_cols=34 Identities=9% Similarity=0.180 Sum_probs=21.5
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEccc
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 60 (84)
+.++.+|+.+.+.+.++.+... .+.+|+++++.+
T Consensus 93 v~~i~~D~~~~~~~~~i~~~~~--~~~~D~V~S~~~ 126 (209)
T PRK11188 93 VDFLQGDFRDELVLKALLERVG--DSKVQVVMSDMA 126 (209)
T ss_pred cEEEecCCCChHHHHHHHHHhC--CCCCCEEecCCC
Confidence 5566677776655555554442 257899888764
No 342
>COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=47.48 E-value=42 Score=19.21 Aligned_cols=36 Identities=11% Similarity=0.254 Sum_probs=25.0
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEccc
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 60 (84)
..+..++.|+++++....+...+... ++|++++-..
T Consensus 85 ~~V~~iq~d~~~~~~~~~l~~~l~~~--~~DvV~sD~a 120 (205)
T COG0293 85 PGVIFLQGDITDEDTLEKLLEALGGA--PVDVVLSDMA 120 (205)
T ss_pred CCceEEeeeccCccHHHHHHHHcCCC--CcceEEecCC
Confidence 34889999999988877766665432 3687765443
No 343
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=47.31 E-value=48 Score=18.13 Aligned_cols=64 Identities=11% Similarity=0.129 Sum_probs=33.1
Q ss_pred HHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhcc
Q psy13141 11 GVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQI 79 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~ 79 (84)
-+.+.+... +..+..+..--.+++.+.+.+... ..+.|+++.+-|......+.+.+-+.+.+..
T Consensus 23 ~l~~~L~~~--G~~v~~~~~v~Dd~~~I~~~l~~~---~~~~dlVIttGG~G~t~~D~t~ea~~~~~~~ 86 (170)
T cd00885 23 FLAKELAEL--GIEVYRVTVVGDDEDRIAEALRRA---SERADLVITTGGLGPTHDDLTREAVAKAFGR 86 (170)
T ss_pred HHHHHHHHC--CCEEEEEEEeCCCHHHHHHHHHHH---HhCCCEEEECCCCCCCCCChHHHHHHHHhCC
Confidence 344555544 545544333333444444444443 3457888877665443445666555555443
No 344
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=46.96 E-value=63 Score=19.45 Aligned_cols=18 Identities=17% Similarity=0.263 Sum_probs=12.1
Q ss_pred CccchhhHHHHHHHHHhh
Q psy13141 2 ACRDLGKANGVRESIITK 19 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~ 19 (84)
++|+.++.+++.+++...
T Consensus 148 ~~r~~~~a~~f~~~~~~~ 165 (301)
T PRK06407 148 YSRNFDHARAFAERFSKE 165 (301)
T ss_pred ECCCHHHHHHHHHHHHHh
Confidence 567777777777766654
No 345
>PRK05580 primosome assembly protein PriA; Validated
Probab=46.80 E-value=91 Score=21.24 Aligned_cols=52 Identities=12% Similarity=0.134 Sum_probs=35.6
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCC-HHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLAS-LDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
..+.+.+++...+|+.++..+..|... .++.++.++.+.+ |.++++|.....
T Consensus 438 G~e~~~e~l~~~fp~~~v~~~~~d~~~~~~~~~~~l~~f~~--g~~~ILVgT~~i 490 (679)
T PRK05580 438 GTERLEEELAELFPEARILRIDRDTTRRKGALEQLLAQFAR--GEADILIGTQML 490 (679)
T ss_pred cHHHHHHHHHHhCCCCcEEEEeccccccchhHHHHHHHHhc--CCCCEEEEChhh
Confidence 456788888888887777766666643 4566777777764 567777766543
No 346
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=46.01 E-value=43 Score=17.30 Aligned_cols=47 Identities=11% Similarity=0.021 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.+.+.+++.+++.+|..++..+...+..... .+.....|++|.+...
T Consensus 53 ~Ka~~~~~~l~~~~p~v~i~~~~~~~~~~~~--------~~~~~~~diVi~~~d~ 99 (143)
T cd01483 53 PKAEVAARRLNELNPGVNVTAVPEGISEDNL--------DDFLDGVDLVIDAIDN 99 (143)
T ss_pred hHHHHHHHHHHHHCCCcEEEEEeeecChhhH--------HHHhcCCCEEEECCCC
Confidence 4566677788887776667766666544321 2223567888777654
No 347
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=45.81 E-value=33 Score=21.02 Aligned_cols=36 Identities=14% Similarity=0.169 Sum_probs=27.0
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+.+++...+|++|...+.++++.+ .+|-+.|=++..
T Consensus 54 ~~~l~l~~gDLtD~~~l~r~l~~v-----~PdEIYNLaAQS 89 (345)
T COG1089 54 DPRLHLHYGDLTDSSNLLRILEEV-----QPDEIYNLAAQS 89 (345)
T ss_pred CceeEEEeccccchHHHHHHHHhc-----Cchhheeccccc
Confidence 345788899999999998888776 466666666543
No 348
>KOG4589|consensus
Probab=45.75 E-value=29 Score=19.90 Aligned_cols=33 Identities=9% Similarity=0.293 Sum_probs=23.2
Q ss_pred eeEEEEe-ecCCHHHHHHHHHHHHhhcCCcceEEEc
Q psy13141 24 QVVVKKL-DLASLDSVREFAAQILDEEKHIHVLINN 58 (84)
Q Consensus 24 ~~~~~~~-D~~~~~~~~~~~~~~~~~~~~id~lv~~ 58 (84)
.+..++. |++|+....++++.+.. .++|+++.-
T Consensus 110 Ga~~i~~~dvtdp~~~~ki~e~lp~--r~VdvVlSD 143 (232)
T KOG4589|consen 110 GATIIQGNDVTDPETYRKIFEALPN--RPVDVVLSD 143 (232)
T ss_pred CcccccccccCCHHHHHHHHHhCCC--CcccEEEec
Confidence 3455555 99999998888887743 468877643
No 349
>PF00994 MoCF_biosynth: Probable molybdopterin binding domain; InterPro: IPR001453 Eukaryotic and prokaryotic molybdoenzymes require a molybdopterin cofactor (MoCF) for their activity. The biosynthesis of this cofactor involves a complex multistep enzymatic pathway. One of the eukaryotic proteins involved in this pathway is the Drosophila protein cinnamon [] which is highly similar to gephyrin, a rat microtubule-associated protein which was thought to anchor the glycine receptor to subsynaptic microtubules. Cinnamon and gephyrin are evolutionary related, in their N-terminal half, to the Escherichia coli MoCF biosynthesis proteins mog/chlG and moaB/chlA2 and, in their C-terminal half, to E. coli moeA/chlE.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 3TCR_B 1O8O_B 1O8Q_G 1EAV_D 1O8N_C 1UUX_A 1UUY_A 2G2C_A 2G4R_C 3K6A_F ....
Probab=45.65 E-value=45 Score=17.37 Aligned_cols=63 Identities=14% Similarity=0.140 Sum_probs=32.3
Q ss_pred HHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 10 NGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
.-+.+.+++. +.++.....=-.+++.+.+.+.... ...|++|-+-|......+.+.+-+.+.+
T Consensus 20 ~~l~~~l~~~--G~~v~~~~~v~Dd~~~i~~~l~~~~---~~~D~VittGG~g~~~~D~t~~a~~~~~ 82 (144)
T PF00994_consen 20 PFLAALLEEL--GIEVIRYGIVPDDPDAIKEALRRAL---DRADLVITTGGTGPGPDDVTPEALAEAG 82 (144)
T ss_dssp HHHHHHHHHT--TEEEEEEEEEESSHHHHHHHHHHHH---HTTSEEEEESSSSSSTTCHHHHHHHHHS
T ss_pred HHHHHHHHHc--CCeeeEEEEECCCHHHHHHHHHhhh---ccCCEEEEcCCcCcccCCcccHHHHHhc
Confidence 3345555544 5454433322235556655554433 3349988888876533444444444433
No 350
>KOG2892|consensus
Probab=45.54 E-value=69 Score=19.51 Aligned_cols=51 Identities=12% Similarity=0.174 Sum_probs=29.6
Q ss_pred HHHHHHHHhhcCCceeEEEEeecCCHHHHHHHH----------HHHHhh--cCCcceEEEccc
Q psy13141 10 NGVRESIITKTNNHQVVVKKLDLASLDSVREFA----------AQILDE--EKHIHVLINNAG 60 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~----------~~~~~~--~~~id~lv~~ag 60 (84)
+.+.+++++.||+..+..+..+-.=..-+.... .++... .+.+|++||.--
T Consensus 23 ~~v~~~Lek~YP~l~f~I~t~~T~GDkIl~k~L~~ig~KsLfTkELE~aL~~~~~divVHSLK 85 (320)
T KOG2892|consen 23 YHVREKLEKKYPELAFEIITMSTTGDKILSKPLAKIGGKSLFTKELEDALINGHVDIVVHSLK 85 (320)
T ss_pred HHHHHHHHhhCCCceeEEEEecccchHHhhchHhhhcccchhHHHHHHHHhcCCccEEEEecc
Confidence 446788999999877777665533322222222 222221 256899998753
No 351
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=45.42 E-value=52 Score=19.94 Aligned_cols=18 Identities=22% Similarity=0.200 Sum_probs=12.2
Q ss_pred CccchhhHHHHHHHHHhh
Q psy13141 2 ACRDLGKANGVRESIITK 19 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~ 19 (84)
++|+.++.+++.+++...
T Consensus 160 ~~R~~~~a~~~a~~~~~~ 177 (326)
T TIGR02992 160 WARDSAKAEALALQLSSL 177 (326)
T ss_pred ECCCHHHHHHHHHHHHhh
Confidence 567777777777776544
No 352
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=44.96 E-value=73 Score=19.63 Aligned_cols=31 Identities=23% Similarity=0.198 Sum_probs=16.9
Q ss_pred EEEEeecCCH--HHHHHHHHHHHhhcCCcceEE
Q psy13141 26 VVKKLDLASL--DSVREFAAQILDEEKHIHVLI 56 (84)
Q Consensus 26 ~~~~~D~~~~--~~~~~~~~~~~~~~~~id~lv 56 (84)
..+.+|.+.. ..+.++++++++.++.+.+++
T Consensus 113 d~i~iD~a~gh~~~~~e~I~~ir~~~p~~~vi~ 145 (326)
T PRK05458 113 EYITIDIAHGHSDSVINMIQHIKKHLPETFVIA 145 (326)
T ss_pred CEEEEECCCCchHHHHHHHHHHHhhCCCCeEEE
Confidence 4555565554 445566666666655444444
No 353
>PF06962 rRNA_methylase: Putative rRNA methylase; InterPro: IPR010719 This family contains a number of putative rRNA methylases.; PDB: 3EEY_H 3LBY_A 3MTI_A.
Probab=44.21 E-value=23 Score=18.94 Aligned_cols=52 Identities=13% Similarity=0.086 Sum_probs=28.1
Q ss_pred cchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 4 RDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 4 r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
-.++.++.+.+.+++.....++..+...- +.+.+.+ .+ ++++.++.|=|+..
T Consensus 7 IQ~~Ai~~T~~rL~~~~~~~~v~li~~sH---e~l~~~i---~~--~~v~~~iFNLGYLP 58 (140)
T PF06962_consen 7 IQEEAIENTRERLEEAGLEDRVTLILDSH---ENLDEYI---PE--GPVDAAIFNLGYLP 58 (140)
T ss_dssp S-HHHHHHHHHHHHHTT-GSGEEEEES-G---GGGGGT-----S----EEEEEEEESB-C
T ss_pred CHHHHHHHHHHHHHhcCCCCcEEEEECCH---HHHHhhC---cc--CCcCEEEEECCcCC
Confidence 34567777888888764223466555332 2222223 22 68999999999865
No 354
>PRK03673 hypothetical protein; Provisional
Probab=44.02 E-value=45 Score=21.08 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=30.3
Q ss_pred HHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhh
Q psy13141 12 VRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQ 74 (84)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~ 74 (84)
+.+.+... +..+.....=- |+.+.+.+.+.+...+-|++|-+-|...-..+.+.+-.-
T Consensus 26 la~~L~~~--G~~v~~~~~v~---D~~~~i~~~l~~a~~~~DlVI~tGGlGpt~dD~t~~avA 83 (396)
T PRK03673 26 LADFFFHQ--GLPLSRRNTVG---DNLDALVAILRERSQHADVLIVNGGLGPTSDDLSALAAA 83 (396)
T ss_pred HHHHHHHC--CCEEEEEEEcC---CCHHHHHHHHHHHhccCCEEEEcCCCCCCCcccHHHHHH
Confidence 44445544 44444333222 334445555555566789988888865433344444333
No 355
>KOG2865|consensus
Probab=43.32 E-value=32 Score=21.16 Aligned_cols=32 Identities=38% Similarity=0.507 Sum_probs=24.8
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
+++.++..|+.|++++++.++. -+++||-.|.
T Consensus 109 GQvl~~~fd~~DedSIr~vvk~-------sNVVINLIGr 140 (391)
T KOG2865|consen 109 GQVLFMKFDLRDEDSIRAVVKH-------SNVVINLIGR 140 (391)
T ss_pred cceeeeccCCCCHHHHHHHHHh-------CcEEEEeecc
Confidence 4688999999999999887743 3566776764
No 356
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=42.71 E-value=55 Score=17.55 Aligned_cols=43 Identities=9% Similarity=0.048 Sum_probs=29.9
Q ss_pred ccchhhHHHHHHHHHhhcCCce-eEEEEeecCCHHHHHHHHHHHHh
Q psy13141 3 CRDLGKANGVRESIITKTNNHQ-VVVKKLDLASLDSVREFAAQILD 47 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~ 47 (84)
+||.++-+.....|++. |=+ +.+..|++.+..+..+..+.+.+
T Consensus 91 ~kNveRD~r~~~~L~~~--GwrvlvVWEC~~r~kas~a~~l~rl~~ 134 (150)
T COG3727 91 GKNVERDERDIKRLQQL--GWRVLVVWECALRKKASDAARLERLEE 134 (150)
T ss_pred hhhhhhhHHHHHHHHHc--CCeEEEEEeeechHHHhHHHHHHHHHH
Confidence 45666666667777776 544 45568999888777777777665
No 357
>PF03753 HHV6-IE: Human herpesvirus 6 immediate early protein ; InterPro: IPR005507 The proteins in this family are poorly characterised, but an investigation [] has indicated that the immediate early protein is required for the down-regulation of MHC class I expression in dendritic cells. Human herpesvirus 6 immediate early protein is also referred to as U90.
Probab=42.31 E-value=2.8 Score=27.76 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=25.2
Q ss_pred cceEEEcccCCC----CcccCChhhhhhhhccceec
Q psy13141 52 IHVLINNAGQGG----ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 52 id~lv~~ag~~~----~~~~~~~~~~~~~~~~n~~~ 83 (84)
-|.||++||... .+..+..+++-+++.+|+.+
T Consensus 44 ED~LIn~AGlLT~~r~Ml~~L~LEQLsQliNiNLlS 79 (993)
T PF03753_consen 44 EDCLINHAGLLTNDRSMLTGLALEQLSQLININLLS 79 (993)
T ss_pred HHHHhhccchhhhhHHHHHHHHHHHHHhhhhhhhhc
Confidence 577999999875 24466778999999999875
No 358
>PF03461 TRCF: TRCF domain; InterPro: IPR005118 This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the transcription-repair-coupling factor (TRCF) which releases RNAP and the truncated transcript.; GO: 0003684 damaged DNA binding, 0004386 helicase activity, 0005524 ATP binding, 0006281 DNA repair; PDB: 2QSR_A 2EYQ_A.
Probab=42.22 E-value=33 Score=16.96 Aligned_cols=19 Identities=11% Similarity=0.263 Sum_probs=9.8
Q ss_pred CCHHHHHHHHHHHHhhcCC
Q psy13141 33 ASLDSVREFAAQILDEEKH 51 (84)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~ 51 (84)
.+.+++.++.+++..+||.
T Consensus 30 ~~~~el~~l~~El~DRFG~ 48 (101)
T PF03461_consen 30 ESEEELEDLREELIDRFGP 48 (101)
T ss_dssp -SHHHHHHHHHHHHHHH-S
T ss_pred CCHHHHHHHHHHHHHHcCC
Confidence 4455566666666665553
No 359
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A.
Probab=42.00 E-value=42 Score=16.03 Aligned_cols=44 Identities=7% Similarity=0.029 Sum_probs=23.4
Q ss_pred chhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEccc
Q psy13141 5 DLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 60 (84)
+++.++...+..... +..+.+++.|+.+.. ...++.|++++..+
T Consensus 33 s~~~l~~~~~~~~~~--~~~~~~~~~D~~~l~----------~~~~~~D~v~~~~~ 76 (101)
T PF13649_consen 33 SPEMLELAKKRFSED--GPKVRFVQADARDLP----------FSDGKFDLVVCSGL 76 (101)
T ss_dssp -HHHHHHHHHHSHHT--TTTSEEEESCTTCHH----------HHSSSEEEEEE-TT
T ss_pred CHHHHHHHHHhchhc--CCceEEEECCHhHCc----------ccCCCeeEEEEcCC
Confidence 334444444444433 336777788876531 13357888887544
No 360
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=41.79 E-value=99 Score=20.23 Aligned_cols=51 Identities=14% Similarity=0.120 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCC-HHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLAS-LDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.+.+.++++..+|+.++..+-.|... ..+.+..++.+.+ |.++++|.....
T Consensus 271 te~~~e~l~~~fp~~~v~~~d~d~~~~~~~~~~~l~~f~~--g~~~ILVgT~~i 322 (505)
T TIGR00595 271 TEQVEEELAKLFPGARIARIDSDTTSRKGAHEALLNQFAN--GKADILIGTQMI 322 (505)
T ss_pred HHHHHHHHHhhCCCCcEEEEecccccCccHHHHHHHHHhc--CCCCEEEeCccc
Confidence 46778888888887777777677544 3455666777654 568888766543
No 361
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=41.73 E-value=30 Score=20.06 Aligned_cols=36 Identities=17% Similarity=-0.031 Sum_probs=21.9
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCC-cceEEEcccC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKH-IHVLINNAGQ 61 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~-id~lv~~ag~ 61 (84)
+..+.+|+.+++++...+... +.+.. +|.++++++.
T Consensus 41 ~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 41 EKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYLVAPP 77 (285)
T ss_pred CccccccCCCHHHHHHHHhcc-cCcCCceeEEEEeCCC
Confidence 344567888888877766442 22233 6777766653
No 362
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=41.49 E-value=95 Score=19.93 Aligned_cols=15 Identities=13% Similarity=0.127 Sum_probs=9.4
Q ss_pred cCCcceEEEcccCCC
Q psy13141 49 EKHIHVLINNAGQGG 63 (84)
Q Consensus 49 ~~~id~lv~~ag~~~ 63 (84)
....|++|.+.|...
T Consensus 236 l~~~DvVissTsa~~ 250 (414)
T COG0373 236 LAEADVVISSTSAPH 250 (414)
T ss_pred hhhCCEEEEecCCCc
Confidence 345677777766544
No 363
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=41.31 E-value=69 Score=18.26 Aligned_cols=26 Identities=15% Similarity=0.125 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeec
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDL 32 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~ 32 (84)
.+.+.+.+.+++.+|..++..+...+
T Consensus 75 ~Ka~~~~~~l~~~np~~~i~~~~~~i 100 (228)
T cd00757 75 PKAEAAAERLRAINPDVEIEAYNERL 100 (228)
T ss_pred hHHHHHHHHHHHhCCCCEEEEeccee
Confidence 45666777888777666666665555
No 364
>TIGR03599 YloV DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.
Probab=41.29 E-value=1.1e+02 Score=20.38 Aligned_cols=40 Identities=20% Similarity=0.144 Sum_probs=31.6
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
-++.+..+-.+.+..+.+.+.+.+.+..+++-++..|...
T Consensus 483 lvTi~~G~~~~~~~~~~l~~~i~~~~~~veve~~~GgQ~~ 522 (530)
T TIGR03599 483 LITIFYGEDATEEEAEELEAFIEEKYPDVEVEIYEGGQPL 522 (530)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEEECCCCc
Confidence 3566666667777889999999999989999888877544
No 365
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=40.40 E-value=48 Score=18.97 Aligned_cols=30 Identities=20% Similarity=0.352 Sum_probs=20.1
Q ss_pred ecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 31 DLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 31 D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
|++-...++.++++++++ .+.++|..+|+-
T Consensus 71 ~i~Idp~fKef~e~ike~--di~fiVvSsGm~ 100 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEH--DIPFIVVSSGMD 100 (220)
T ss_pred hcccCccHHHHHHHHHHc--CCCEEEEeCCCc
Confidence 344446778888888876 456677777763
No 366
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=39.74 E-value=45 Score=15.73 Aligned_cols=47 Identities=4% Similarity=0.013 Sum_probs=27.8
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCC----HHHHHHHHHHHHhhc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLAS----LDSVREFAAQILDEE 49 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~----~~~~~~~~~~~~~~~ 49 (84)
+.+++.+..+.+.++..++..+...+-..+.+ ..+....+..+...+
T Consensus 21 ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~ 71 (91)
T PF02875_consen 21 AHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQL 71 (91)
T ss_dssp --SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhc
Confidence 45777788888888877666666666665444 223334555555543
No 367
>PRK01215 competence damage-inducible protein A; Provisional
Probab=39.56 E-value=82 Score=18.67 Aligned_cols=62 Identities=10% Similarity=0.193 Sum_probs=31.1
Q ss_pred HHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 11 GVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
-+.+.+... +..+.....--.+.+.+.+.+.... .+.|++|-+-|......+.+.+-+.+.+
T Consensus 27 ~l~~~L~~~--G~~v~~~~~v~Dd~~~I~~~l~~a~---~~~DlVIttGG~g~t~dD~t~eaia~~~ 88 (264)
T PRK01215 27 WIARRLTYL--GYTVRRITVVMDDIEEIVSAFREAI---DRADVVVSTGGLGPTYDDKTNEGFAKAL 88 (264)
T ss_pred HHHHHHHHC--CCeEEEEEEeCCCHHHHHHHHHHHh---cCCCEEEEeCCCcCChhhhHHHHHHHHh
Confidence 344455554 5555444333334455555555443 3458888876654333344444444443
No 368
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=39.02 E-value=1e+02 Score=19.67 Aligned_cols=32 Identities=16% Similarity=0.192 Sum_probs=16.8
Q ss_pred eEEEEeecCCH--HHHHHHHHHHHhhcCCcceEE
Q psy13141 25 VVVKKLDLASL--DSVREFAAQILDEEKHIHVLI 56 (84)
Q Consensus 25 ~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~lv 56 (84)
+..+.+|.+.. ..+..+++.+++.++.+.+++
T Consensus 166 vDvI~iD~a~g~~~~~~~~v~~ik~~~p~~~vi~ 199 (404)
T PRK06843 166 VDILVIDSAHGHSTRIIELVKKIKTKYPNLDLIA 199 (404)
T ss_pred CCEEEEECCCCCChhHHHHHHHHHhhCCCCcEEE
Confidence 33444455544 345556666666665444443
No 369
>PRK06382 threonine dehydratase; Provisional
Probab=38.90 E-value=96 Score=19.53 Aligned_cols=25 Identities=20% Similarity=0.460 Sum_probs=18.2
Q ss_pred HHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 39 REFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 39 ~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+..++.++.+.+|.+|..+|..+
T Consensus 161 ~t~~~Ei~eq~~~~d~vvvpvG~GG 185 (406)
T PRK06382 161 GTIGLEIMEDLPDLDQIIVPVGGGG 185 (406)
T ss_pred HHHHHHHHHhcCCCCEEEEeeChHH
Confidence 4455667777778999998888643
No 370
>COG3805 DodA Aromatic ring-cleaving dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=38.20 E-value=58 Score=16.55 Aligned_cols=31 Identities=6% Similarity=0.226 Sum_probs=24.3
Q ss_pred EEeecCCHHHHHHHHHHHHhhcCCcceEEEcc
Q psy13141 28 KKLDLASLDSVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 28 ~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 59 (84)
++.-+.+ ....+++.++....|.++++||-.
T Consensus 56 yqv~F~~-~~fgqlvpWLmlnrggLsiLiHP~ 86 (120)
T COG3805 56 YQVHFRD-NQFGQLVPWLMLNRGGLSILIHPV 86 (120)
T ss_pred eeEeccc-hhhhHHhHHHHhccCCceEEEecC
Confidence 4555655 467889999998889999999865
No 371
>COG0009 SUA5 Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]
Probab=38.06 E-value=81 Score=18.13 Aligned_cols=37 Identities=11% Similarity=0.017 Sum_probs=24.7
Q ss_pred hHHHHHHHHHhh----cCCceeEEEEeecCCHHHHHHHHHH
Q psy13141 8 KANGVRESIITK----TNNHQVVVKKLDLASLDSVREFAAQ 44 (84)
Q Consensus 8 ~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~ 44 (84)
.++++.+.+++. +|...+..+.||..+++++.++++-
T Consensus 15 ~~~~a~~~l~~G~vVa~PTeTVYGLg~~~~~~~Av~~i~~~ 55 (211)
T COG0009 15 AIEKAVEALRKGGVVAYPTDTVYGLGADATNEEAVERLYEI 55 (211)
T ss_pred HHHHHHHHHHcCCEEEEEccchheeecCCCCHHHHHHHHHH
Confidence 355666666653 2444566788999998888776643
No 372
>PF07315 DUF1462: Protein of unknown function (DUF1462); InterPro: IPR009190 There are currently no experimental data for members of this group of bacterial proteins or their homologues. A crystal structure of Q7A6J8 from SWISSPROT revealed a thioredoxin-like fold, its core consisting of three layers alpha/beta/alpha.; PDB: 1XG8_A.
Probab=37.97 E-value=55 Score=16.21 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHH---HHHHHHHHHh
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDS---VREFAAQILD 47 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~---~~~~~~~~~~ 47 (84)
+.-+.+...+..++|+..+.+.-+|+-.+.. -+++...+.+
T Consensus 20 eTyeWL~aal~RKyp~~~f~~~YiDi~~p~~~~~~~~~a~~I~e 63 (93)
T PF07315_consen 20 ETYEWLEAALKRKYPDQPFEFTYIDIENPPENDHDQQFAERILE 63 (93)
T ss_dssp HHHHHHHHHHHHH-TTS-EEEEEEETTT----HHHHHHHHHHHT
T ss_pred hHHHHHHHHHhCcCCCCceEEEEEecCCCCccHHHHHHHHHHHh
Confidence 4445566677778888777777788877654 3466677765
No 373
>PRK14478 nitrogenase molybdenum-cofactor biosynthesis protein NifE; Provisional
Probab=37.96 E-value=1.1e+02 Score=19.77 Aligned_cols=58 Identities=16% Similarity=0.053 Sum_probs=32.3
Q ss_pred chhhHHHHHHHHHhhcCCceeEEE-Ee--ecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 5 DLGKANGVRESIITKTNNHQVVVK-KL--DLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-~~--D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+++.+...++.+.+. .++.++ .. .-.--++++.++..+.+..+..-+.|++.|+.+
T Consensus 103 g~~kL~~~I~ei~~~~~-P~~I~V~tTC~~~lIGdDi~~v~~~~~~~~~~pvi~v~t~Gf~g 163 (475)
T PRK14478 103 GEKKLFKAIDEIIEKYA-PPAVFVYQTCVVALIGDDIDAVCKRAAEKFGIPVIPVNSPGFVG 163 (475)
T ss_pred CHHHHHHHHHHHHHhcC-CCEEEEeCCChHHHhccCHHHHHHHHHHhhCCCEEEEECCCccc
Confidence 34566666666666552 233322 11 112225678888887766664445667777654
No 374
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=37.85 E-value=1.1e+02 Score=19.83 Aligned_cols=56 Identities=16% Similarity=0.108 Sum_probs=35.8
Q ss_pred chhhHHHHHHHHHhhcCCceeEEEE--e--ecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 5 DLGKANGVRESIITKTNNHQVVVKK--L--DLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~--D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
..+++..+..++.+.++ .++.++- | .+- -+++++...++.+..+-.-+.+++.|+-
T Consensus 81 ~~~~L~~~i~ei~~~~~-p~~ifv~~TC~t~iI-GdDle~va~~~~~~~gipVV~v~~~Gf~ 140 (457)
T CHL00073 81 DYEELKRLCLQIKKDRN-PSVIVWIGTCTTEII-KMDLEGMAPKLEAEIGIPIVVARANGLD 140 (457)
T ss_pred CHHHHHHHHHHHHHhCC-CCEEEEEccCcHHhh-ccCHHHHHHHHHHhhCCCEEEEeCCCcc
Confidence 35677888888887773 3433322 2 222 2567888888877776666677888865
No 375
>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc). Xsc plays a key role in the degradation of taurine, catalyzing the desulfonation of 2-sulfoacetaldehyde into sulfite and acetyl phosphate. This enzyme requires TPP and divalent metal ions for activity.
Probab=37.65 E-value=75 Score=17.62 Aligned_cols=42 Identities=21% Similarity=0.069 Sum_probs=25.3
Q ss_pred CCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 21 NNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 21 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
|+..+..+..|-+=.-.+.++.-.......-+-+++||.|+.
T Consensus 70 p~r~vv~i~GDG~f~m~~~eL~Ta~~~~lpvi~vV~NN~~yg 111 (196)
T cd02013 70 PDRPVVAIAGDGAWGMSMMEIMTAVRHKLPVTAVVFRNRQWG 111 (196)
T ss_pred CCCcEEEEEcchHHhccHHHHHHHHHhCCCeEEEEEECchhH
Confidence 355678888886665566666554443433344555888763
No 376
>PRK11630 hypothetical protein; Provisional
Probab=37.40 E-value=45 Score=18.86 Aligned_cols=35 Identities=6% Similarity=-0.005 Sum_probs=21.0
Q ss_pred HHHHHHHHHhh----cCCceeEEEEeecCCHHHHHHHHH
Q psy13141 9 ANGVRESIITK----TNNHQVVVKKLDLASLDSVREFAA 43 (84)
Q Consensus 9 ~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~ 43 (84)
++++.+.+++. +|...+..+.||..+.+.++++++
T Consensus 17 i~~a~~~L~~G~vi~~PTdTvYgL~~d~~n~~Av~~l~~ 55 (206)
T PRK11630 17 INQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICR 55 (206)
T ss_pred HHHHHHHHHCCCEEEEeCCChHhhhcCCCCHHHHHHHHH
Confidence 45555555542 233445556778888777777654
No 377
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=37.36 E-value=62 Score=20.48 Aligned_cols=39 Identities=23% Similarity=0.216 Sum_probs=24.6
Q ss_pred CceeEEEEeecCCHHH-H-HHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 22 NHQVVVKKLDLASLDS-V-REFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..++.++..|++.+.- + +.-+.. -...+|.++||++...
T Consensus 59 ~~ri~vv~gDl~e~~lGL~~~~~~~---La~~vD~I~H~gA~Vn 99 (382)
T COG3320 59 ADRVEVVAGDLAEPDLGLSERTWQE---LAENVDLIIHNAALVN 99 (382)
T ss_pred cceEEEEecccccccCCCCHHHHHH---HhhhcceEEecchhhc
Confidence 4678999999885421 1 111222 2246999999998654
No 378
>cd01977 Nitrogenase_VFe_alpha Nitrogenase_VFe_alpha -like: Nitrogenase VFe protein, alpha subunit like. This group contains proteins similar to the alpha subunits of, the VFe protein of the vanadium-dependent (V-) nitrogenase and the FeFe protein of the iron only (Fe-) nitrogenase Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V- and Fe- nitrogenases there is a molybdenum (Mo)-dependent nitrogenase which is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha sub
Probab=37.36 E-value=1.1e+02 Score=19.35 Aligned_cols=57 Identities=14% Similarity=0.159 Sum_probs=33.4
Q ss_pred hhhHHHHHHHHHhhcCCceeEEEE----eecCCHHHHHHHHHHHHhhcCCcc-eEEEcccCCC
Q psy13141 6 LGKANGVRESIITKTNNHQVVVKK----LDLASLDSVREFAAQILDEEKHIH-VLINNAGQGG 63 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~----~D~~~~~~~~~~~~~~~~~~~~id-~lv~~ag~~~ 63 (84)
.+++.+...++.+.+|..++.++. .++. -++++.++..+.++.+.+. +.+++.|+.+
T Consensus 72 ~~~L~~aI~~~~~~~p~p~~i~V~~tc~~~li-GdDi~~v~~~~~~~~~~~~vi~v~tpgf~g 133 (415)
T cd01977 72 EKKLKKNIIEAFKEFPDIKRMTVYTTCTTALI-GDDIKAVAKEVMEELPDVDIFVCNAPGFAG 133 (415)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEECCCchhhh-cCCHHHHHHHHHHhcCCCeEEEEeCCCcCC
Confidence 356666666666676543333321 1222 3678888888887776344 4556666654
No 379
>PRK10634 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; Provisional
Probab=37.27 E-value=49 Score=18.43 Aligned_cols=19 Identities=21% Similarity=0.027 Sum_probs=10.1
Q ss_pred eEEEEeecCCHHHHHHHHH
Q psy13141 25 VVVKKLDLASLDSVREFAA 43 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~ 43 (84)
+..+.||..+.++++++++
T Consensus 30 vYgL~~~~~n~~Av~ri~~ 48 (190)
T PRK10634 30 VFGVGCDPDSETAVMRLLE 48 (190)
T ss_pred hhhhhcCCCCHHHHHHHHH
Confidence 4445556666655555443
No 380
>PF04536 TPM: TLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase; InterPro: IPR007621 This is a family of uncharacterised proteins. They are found in both eukarya and eubacteria. In eubacteria the region is towards the N-terminal of the protein and is accompanied by an N-terminal signal sequence. The C-terminal of eubacterial proteins typically contains one or more putative transmembrane regions. In eukaryotes the region is not accompanied by a signal sequence.; PDB: 3PTJ_A 3PW9_A 3PVH_A 2KPT_A 2KW7_A.
Probab=37.20 E-value=56 Score=16.09 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=26.8
Q ss_pred hhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhc
Q psy13141 6 LGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEE 49 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 49 (84)
...+++..+.+...+ +.++.++..+-....+++.+...+.+.+
T Consensus 7 ~~~l~~~l~~~~~~t-~~~i~Vvtv~~~~~~~~~~~A~~~~~~~ 49 (119)
T PF04536_consen 7 RERLNQALAKLEKKT-GVQIVVVTVPSLPGQDIEDYAQQLFERW 49 (119)
T ss_dssp HHHHHHHHHHHHHHC---EEEEEEESB-TTS-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh-CCEEEEEEEcCCCCCCHHHHHHHHHHHh
Confidence 345666667776665 5667666666555577888888888764
No 381
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=37.11 E-value=81 Score=18.75 Aligned_cols=26 Identities=12% Similarity=0.250 Sum_probs=20.0
Q ss_pred ecCCHHHHHHHHHHHHhhcCCcceEEEc
Q psy13141 31 DLASLDSVREFAAQILDEEKHIHVLINN 58 (84)
Q Consensus 31 D~~~~~~~~~~~~~~~~~~~~id~lv~~ 58 (84)
|.-+++.++..++++++ ..+|++++-
T Consensus 95 dalt~E~v~~vv~eL~~--~~fDyIi~D 120 (272)
T COG2894 95 DALTPEGVKKVVNELKA--MDFDYIIID 120 (272)
T ss_pred ccCCHHHHHHHHHHHHh--cCCCEEEec
Confidence 67778889999988887 467877654
No 382
>PTZ00285 glucosamine-6-phosphate isomerase; Provisional
Probab=36.96 E-value=87 Score=18.24 Aligned_cols=41 Identities=15% Similarity=0.298 Sum_probs=24.0
Q ss_pred CceeEEEEeecCCHH-HHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 22 NHQVVVKKLDLASLD-SVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+++.+..+..+++ ...++-+.+ ...+.+|+++-..|.-+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~y~~~i-~~~~~~Dl~lLG~G~DG 142 (253)
T PTZ00285 101 EENRHILNGTAPDLEEECRRYEEKI-RAVGGIDLFLAGIGTDG 142 (253)
T ss_pred HhhEEcCCCCCcCHHHHHHHHHHHH-HHhCCCcEEEeCCCCCC
Confidence 335666555554543 334444444 34568999998888654
No 383
>cd02990 UAS_FAF1 UAS family, FAS-associated factor 1 (FAF1) subfamily; FAF1 contains a UAS domain of unknown function N-terminal to a ubiquitin-associated UBX domain. FAF1 also contains ubiquitin-associated UBA and nuclear targeting domains, N-terminal to the UAS domain. FAF1 is an apoptotic signaling molecule that acts downstream in the Fas signal transduction pathway. It interacts with the cytoplasmic domain of Fas, but not to a Fas mutant that is deficient in signal transduction. It is widely expressed in adult and embryonic tissues, and in tumor cell lines, and is localized not only in the cytoplasm where it interacts with Fas, but also in the nucleus. FAF1 contains phosphorylation sites for protein kinase CK2 within the nuclear targeting domain. Phosphorylation influences nuclear localization of FAF1 but does not affect its potentiation of Fas-induced apoptosis. Other functions have also been attributed to FAF1. It inhibits nuclear factor-kB (NF-kB) by interfering with the nuclear
Probab=36.91 E-value=69 Score=17.02 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=16.5
Q ss_pred ceeEEEEeecCCHHHHHHHHHHH
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQI 45 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~ 45 (84)
.+...+.+|+++++....++..+
T Consensus 55 ~nfv~Wg~dvt~~~~~~~fl~~~ 77 (136)
T cd02990 55 QNFITWGWDMTKESNKARFLSSC 77 (136)
T ss_pred cCEEEEeeeccchhhhhHHHHhh
Confidence 46888999999988655444443
No 384
>PLN00165 hypothetical protein; Provisional
Probab=36.09 E-value=13 Score=18.15 Aligned_cols=17 Identities=12% Similarity=0.049 Sum_probs=14.5
Q ss_pred CChhhhhhhhccceecC
Q psy13141 68 ITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 68 ~~~~~~~~~~~~n~~~~ 84 (84)
..++.++++|-.+++||
T Consensus 71 q~EEsLRtVMyLSCWGP 87 (88)
T PLN00165 71 QSEESLRTVMYLSCWGP 87 (88)
T ss_pred chHHhhheeeEecccCC
Confidence 35789999999999987
No 385
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=35.96 E-value=67 Score=16.60 Aligned_cols=27 Identities=7% Similarity=0.070 Sum_probs=18.2
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhh
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDE 48 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~ 48 (84)
+.++....+...+.+.+.+.+..+.+.
T Consensus 93 ~eRv~~~~~~~~~~~~fa~~~~~f~~~ 119 (124)
T PF02662_consen 93 PERVRLYWISAPEGKRFAEIVNEFTER 119 (124)
T ss_pred hhHeEEEEeCcccHHHHHHHHHHHHHH
Confidence 356777777777777776666655543
No 386
>KOG1202|consensus
Probab=35.94 E-value=53 Score=24.78 Aligned_cols=67 Identities=12% Similarity=0.086 Sum_probs=46.2
Q ss_pred HHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC--CcccCChhhhhhhhccceec
Q psy13141 14 ESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG--ILNRITKDGLQLGMQIDQSE 83 (84)
Q Consensus 14 ~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~n~~~ 83 (84)
...+.. +.++.+-..|++..+..++++..- .+.+.+.+++|-|.+.+ -+++-++++|.++-+-.+.|
T Consensus 1814 rrWr~~--GVqV~vsT~nitt~~ga~~Li~~s-~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~ 1882 (2376)
T KOG1202|consen 1814 RRWRRR--GVQVQVSTSNITTAEGARGLIEES-NKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSG 1882 (2376)
T ss_pred HHHHhc--CeEEEEecccchhhhhHHHHHHHh-hhcccccchhhHHHHHHhhhhcccChhHHHhhhccceee
Confidence 344444 666666667888888888877664 35688888888888776 35677788887766554443
No 387
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=35.77 E-value=1.5e+02 Score=21.71 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=21.4
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
++..+++|+++.+++.++++ ..|++|++...
T Consensus 628 ~~~~v~lDv~D~e~L~~~v~-------~~DaVIsalP~ 658 (1042)
T PLN02819 628 NAEAVQLDVSDSESLLKYVS-------QVDVVISLLPA 658 (1042)
T ss_pred CCceEEeecCCHHHHHHhhc-------CCCEEEECCCc
Confidence 35677889888777655432 37888887754
No 388
>COG1198 PriA Primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication, recombination, and repair]
Probab=35.68 E-value=1.5e+02 Score=20.66 Aligned_cols=49 Identities=10% Similarity=0.197 Sum_probs=33.7
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHH-HHHHHHHHHHhhcCCcceEEEcc
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLD-SVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~lv~~a 59 (84)
.+.+.+++...+|+.++..+-.|.+... +.+.++..+.. |..|++|-..
T Consensus 493 terieeeL~~~FP~~rv~r~d~Dtt~~k~~~~~~l~~~~~--ge~dILiGTQ 542 (730)
T COG1198 493 TERIEEELKRLFPGARIIRIDSDTTRRKGALEDLLDQFAN--GEADILIGTQ 542 (730)
T ss_pred HHHHHHHHHHHCCCCcEEEEccccccchhhHHHHHHHHhC--CCCCeeecch
Confidence 4678889999999888887777776643 35555555543 5678776554
No 389
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=35.67 E-value=68 Score=16.54 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=32.7
Q ss_pred HHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 12 VRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
+.+.+++. +.++.....--.+++.+.+.+....+ ..|+++-+-|......+.+.+-+++..
T Consensus 24 l~~~l~~~--G~~v~~~~~v~Dd~~~i~~~i~~~~~---~~DlvittGG~g~g~~D~t~~ai~~~g 84 (133)
T cd00758 24 LEALLEDL--GCEVIYAGVVPDDADSIRAALIEASR---EADLVLTTGGTGVGRRDVTPEALAELG 84 (133)
T ss_pred HHHHHHHC--CCEEEEeeecCCCHHHHHHHHHHHHh---cCCEEEECCCCCCCCCcchHHHHHHhc
Confidence 33444443 54555443333455555555544433 378888887765444566666655543
No 390
>COG4650 RtcR Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms]
Probab=35.47 E-value=1.1e+02 Score=19.07 Aligned_cols=56 Identities=18% Similarity=0.149 Sum_probs=37.0
Q ss_pred cchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhh---c----CCcceEEEcc
Q psy13141 4 RDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDE---E----KHIHVLINNA 59 (84)
Q Consensus 4 r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~---~----~~id~lv~~a 59 (84)
|+....+.+...+....|...+..++..+.++=++++....+-.. + ..-|++||-.
T Consensus 51 rsr~lfe~l~~dia~vspetev~~vei~lrnpwdfeevy~~lhdfar~y~f~~e~edylihit 113 (531)
T COG4650 51 RSRSLFETLKRDIASVSPETEVVSVEIELRNPWDFEEVYACLHDFARGYEFQPEKEDYLIHIT 113 (531)
T ss_pred hhhhHHHHHHHhhhhcCCcceeEEEEEEecCcccHHHHHHHHHHHhhcCCCCCcccceEEEEe
Confidence 444455666666766666777888888888887777766555432 1 2467888754
No 391
>TIGR00502 nagB glucosamine-6-phosphate isomerase. The set of proteins recognized by this model includes a closely related pair from Bacillus subtilis, one of which is uncharacterized but included as a member of the orthologous set.
Probab=35.26 E-value=69 Score=18.71 Aligned_cols=40 Identities=10% Similarity=0.172 Sum_probs=25.3
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+++.+..+..+++.-.+.++.....++.+|+++-..|.-+
T Consensus 103 ~i~~~~~~~~~~~~~a~~y~~~i~~~~~~Dl~llG~G~DG 142 (259)
T TIGR00502 103 NINILNGNAPDLEAECRRYEEKIRSYGGIDLFMGGIGPDG 142 (259)
T ss_pred HEecCCCCccCHHHHHHHHHHHHHHcCCCCEEEEccCCCC
Confidence 4555555555555444445555566678999998888643
No 392
>PLN02970 serine racemase
Probab=35.26 E-value=1.1e+02 Score=18.67 Aligned_cols=27 Identities=22% Similarity=0.385 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 37 SVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 37 ~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
....+..++.++...+|.+|.++|..+
T Consensus 161 g~~t~g~Ei~~ql~~~D~vv~~vG~GG 187 (328)
T PLN02970 161 GQGTIALEFLEQVPELDVIIVPISGGG 187 (328)
T ss_pred ehHHHHHHHHHhccCCCEEEEeeCchH
Confidence 334455666666667899998888654
No 393
>KOG0088|consensus
Probab=35.14 E-value=85 Score=17.54 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=18.0
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHh
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILD 47 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~ 47 (84)
+..-..+..|++|.++++..-.++.+
T Consensus 85 gSnGalLVyDITDrdSFqKVKnWV~E 110 (218)
T KOG0088|consen 85 GSNGALLVYDITDRDSFQKVKNWVLE 110 (218)
T ss_pred CCCceEEEEeccchHHHHHHHHHHHH
Confidence 34445667899999988776655554
No 394
>COG0282 ackA Acetate kinase [Energy production and conversion]
Probab=34.81 E-value=82 Score=20.07 Aligned_cols=16 Identities=25% Similarity=0.322 Sum_probs=13.4
Q ss_pred hcCCcceEEEcccCCC
Q psy13141 48 EEKHIHVLINNAGQGG 63 (84)
Q Consensus 48 ~~~~id~lv~~ag~~~ 63 (84)
..+++|.+|..+|+..
T Consensus 316 ~L~glDaiVFTaGIGE 331 (396)
T COG0282 316 ALGGLDALVFTAGIGE 331 (396)
T ss_pred HhCCCCEEEEeCcccc
Confidence 4578999999999865
No 395
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=34.77 E-value=71 Score=16.52 Aligned_cols=13 Identities=23% Similarity=0.427 Sum_probs=9.6
Q ss_pred CCcceEEEcccCC
Q psy13141 50 KHIHVLINNAGQG 62 (84)
Q Consensus 50 ~~id~lv~~ag~~ 62 (84)
...|++|++....
T Consensus 80 ~~~Dvvi~~~~~~ 92 (155)
T cd01065 80 AEADLIINTTPVG 92 (155)
T ss_pred ccCCEEEeCcCCC
Confidence 5688888887653
No 396
>TIGR01884 cas_HTH CRISPR locus-related DNA-binding protein. Most but not all examples of this family are associated with CRISPR loci, a combination of DNA repeats and characteristic proteins encoded near the repeat cluster. The C-terminal region of this protein is homologous to DNA-binding helix-turn-helix domains with predicted transcriptional regulatory activity.
Probab=34.73 E-value=87 Score=17.51 Aligned_cols=38 Identities=26% Similarity=0.441 Sum_probs=22.4
Q ss_pred ceeEEEEeecCCHHH-HHHHHHHHHhhcCCcceEEEcccC
Q psy13141 23 HQVVVKKLDLASLDS-VREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~-~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
..+....+|+.+... +.+..+-+.+.. .-+++||=+|-
T Consensus 59 ~~~~~~~vd~~d~~~~~~~v~~~i~~~~-~~~v~vnlsgG 97 (203)
T TIGR01884 59 VEGTIKEIELKDVPSILRQMSDIIKEER-EPRVIINLSGG 97 (203)
T ss_pred CcceEEEEecCCHHHHHHHHHHHHHhcc-cCcEEEEcCCC
Confidence 467788889988754 444444444433 33466665554
No 397
>PRK06823 ornithine cyclodeaminase; Validated
Probab=34.55 E-value=1.1e+02 Score=18.64 Aligned_cols=17 Identities=12% Similarity=-0.085 Sum_probs=10.6
Q ss_pred CccchhhHHHHHHHHHh
Q psy13141 2 ACRDLGKANGVRESIIT 18 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~ 18 (84)
++|+.++.+++.+.++.
T Consensus 159 ~~r~~~~a~~~~~~~~~ 175 (315)
T PRK06823 159 WGRSETALEEYRQYAQA 175 (315)
T ss_pred ECCCHHHHHHHHHHHHh
Confidence 46677776666665543
No 398
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=34.17 E-value=56 Score=19.63 Aligned_cols=12 Identities=33% Similarity=0.484 Sum_probs=8.7
Q ss_pred CcceEEEcccCC
Q psy13141 51 HIHVLINNAGQG 62 (84)
Q Consensus 51 ~id~lv~~ag~~ 62 (84)
..|++||+....
T Consensus 190 ~~dliINaTp~G 201 (283)
T COG0169 190 EADLLINATPVG 201 (283)
T ss_pred ccCEEEECCCCC
Confidence 368899887653
No 399
>PF13727 CoA_binding_3: CoA-binding domain; PDB: 3NKL_B.
Probab=34.03 E-value=75 Score=16.61 Aligned_cols=25 Identities=8% Similarity=0.238 Sum_probs=10.9
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhh
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDE 48 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~ 48 (84)
+-..+..+..+.+.+.++++...+.
T Consensus 143 d~v~ial~~~~~~~i~~ii~~~~~~ 167 (175)
T PF13727_consen 143 DEVIIALPWSEEEQIKRIIEELENH 167 (175)
T ss_dssp -EEEE--TTS-HHHHHHHHHHHHTT
T ss_pred CEEEEEcCccCHHHHHHHHHHHHhC
Confidence 3344445555555555555555443
No 400
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]
Probab=33.78 E-value=1.1e+02 Score=18.58 Aligned_cols=59 Identities=15% Similarity=0.125 Sum_probs=36.6
Q ss_pred chhhHHHHHHHHHhhcCCc-eeEEEEeecCC-----HHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 5 DLGKANGVRESIITKTNNH-QVVVKKLDLAS-----LDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~-----~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+.++++++..++...++.. -..++...+.| .+.++-+++.+.+.+..+-.++...|.+.
T Consensus 37 ~k~rL~~~Lkei~~k~~~~~vgvvMTaELaD~f~tk~eGVe~Ii~~v~~Af~~pv~~v~~~G~~~ 101 (330)
T COG1548 37 KKDRLEETLKEIVHKDNVDYVGVVMTAELADAFKTKAEGVEDIIDTVEKAFNCPVYVVDVNGNFL 101 (330)
T ss_pred chhHHHHHHHHHhccCCcceeEEEeeHHHHHHhhhHHhHHHHHHHHHHHhcCCceEEEeccCcCc
Confidence 4567777777776554322 12333344433 46677778888888877767788777655
No 401
>PLN02206 UDP-glucuronate decarboxylase
Probab=33.78 E-value=28 Score=22.06 Aligned_cols=13 Identities=8% Similarity=0.100 Sum_probs=10.6
Q ss_pred CcceEEEcccCCC
Q psy13141 51 HIHVLINNAGQGG 63 (84)
Q Consensus 51 ~id~lv~~ag~~~ 63 (84)
.+|.+||.|+...
T Consensus 183 ~~D~ViHlAa~~~ 195 (442)
T PLN02206 183 EVDQIYHLACPAS 195 (442)
T ss_pred CCCEEEEeeeecc
Confidence 4899999998654
No 402
>COG5583 Uncharacterized small protein [Function unknown]
Probab=33.71 E-value=51 Score=14.50 Aligned_cols=28 Identities=0% Similarity=0.074 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHh-hcCCcceEEEcccCC
Q psy13141 35 LDSVREFAAQILD-EEKHIHVLINNAGQG 62 (84)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~id~lv~~ag~~ 62 (84)
++-++.+-+.+.. .||.+-+.||+.-+.
T Consensus 8 ~~~~ekI~~~Le~lkyGsV~ItVhdgqVi 36 (54)
T COG5583 8 PEVIEKIKKALEGLKYGSVTITVHDGQVI 36 (54)
T ss_pred hHHHHHHHHHHhhcccceEEEEEECCEEE
Confidence 3444444444444 578899999887554
No 403
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=33.37 E-value=1.1e+02 Score=18.40 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=26.8
Q ss_pred eeEEEEeecCCHHHH------HHHHHHHHhhcCCcceEEEcccC
Q psy13141 24 QVVVKKLDLASLDSV------REFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~------~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
...++.+|.+++... ..+++...+.+..-.+++.++|.
T Consensus 149 ~fDvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q~~~ 192 (282)
T COG0421 149 KFDVIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQAGS 192 (282)
T ss_pred cCCEEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEecCC
Confidence 466777888888544 66777777777666677777665
No 404
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=33.36 E-value=1.4e+02 Score=19.32 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=33.8
Q ss_pred hhhHHHHHHHHHhhcCCceeEEEE----eecCCHHHHHHHHHHHHhhcC-CcceEEEcccCCC
Q psy13141 6 LGKANGVRESIITKTNNHQVVVKK----LDLASLDSVREFAAQILDEEK-HIHVLINNAGQGG 63 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~----~D~~~~~~~~~~~~~~~~~~~-~id~lv~~ag~~~ 63 (84)
.+++.+...++.+.+|..++.++. ..+. -++++.++..+.+.++ ..-+.|++.|+.+
T Consensus 109 e~kL~~aI~e~~~~~p~p~~I~V~stC~~~lI-GDDi~~v~~e~~~~~~~~pvv~v~t~gf~g 170 (457)
T TIGR01284 109 EKKLKRCILEAFREFPEIKRMYTYATCTTALI-GDDIDAIAREVMEEIPDVDVFAINAPGFAG 170 (457)
T ss_pred HHHHHHHHHHHHHhCCCCceEEEECCChHHhh-ccCHHHHHHHHHHhcCCCeEEEeeCCCcCC
Confidence 456777666676666533322221 1222 3678888888887776 3444567777654
No 405
>cd01678 PFL1 Pyruvate formate lyase 1. Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. The PFL mechanism involves an unusual radical cleavage of pyruvate in which two cysteines and one glycine form radicals that are required for catalysis. PFL has a ten-stranded alpha/beta barrel domain that is structurally similar to those of all three ribonucleotide reductase (RNR) classes as well as benzylsuccinate synthase and B12-independent glycerol dehydratase.
Probab=33.23 E-value=1.2e+02 Score=21.14 Aligned_cols=66 Identities=6% Similarity=-0.017 Sum_probs=41.1
Q ss_pred hHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 8 KANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
..+.+...++.-+ ......++.++.+.+.+..+.+.-. ...+.+|--+|+.-.|.+++.+.-++++
T Consensus 668 ~~~~L~~ll~~yf-~~gg~hiq~NVvd~etL~dAq~~PE---~Y~~LiVRVaGYsa~Fv~L~ke~QdeII 733 (738)
T cd01678 668 RIDNLVGILDGYF-TKGGHHLNVNVLNRETLLDAMEHPE---KYPQLTIRVSGYAVNFVKLTREQQLDVI 733 (738)
T ss_pred HHHHHHHHHHHHH-hcCCCccccccCCHHHHHHHHhChh---hcCCeEEEEcceEeeHhhCCHHHHHHHH
Confidence 3444555555433 2345677888888877655443332 2367788888887777777776666554
No 406
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=33.08 E-value=1e+02 Score=17.90 Aligned_cols=28 Identities=18% Similarity=0.189 Sum_probs=18.7
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCC
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLAS 34 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 34 (84)
.+.+.+.+.+++.+|..++.....++.+
T Consensus 53 ~Ka~va~~~l~~~np~v~i~~~~~~i~~ 80 (234)
T cd01484 53 PKSEVAAEAVNDRNPNCKVVPYQNKVGP 80 (234)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence 3556667777777777677776666644
No 407
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=33.08 E-value=60 Score=15.13 Aligned_cols=18 Identities=11% Similarity=0.161 Sum_probs=11.0
Q ss_pred hhHHHHHHHHHhhcCCce
Q psy13141 7 GKANGVRESIITKTNNHQ 24 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~ 24 (84)
+.+..+.+++++.+|+..
T Consensus 51 k~~~r~~~~Le~~~p~a~ 68 (71)
T cd04910 51 KTIKRLTEDLENRFPNAE 68 (71)
T ss_pred HHHHHHHHHHHHhCccCc
Confidence 355666677777766543
No 408
>PRK07334 threonine dehydratase; Provisional
Probab=32.89 E-value=1.1e+02 Score=19.18 Aligned_cols=27 Identities=22% Similarity=0.466 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 37 SVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 37 ~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.......++.++.+.+|.+|.++|..+
T Consensus 157 g~~t~~~Ei~~q~~~~d~vv~~vG~GG 183 (403)
T PRK07334 157 GQGTVALEMLEDAPDLDTLVVPIGGGG 183 (403)
T ss_pred hHHHHHHHHHhcCCCCCEEEEecCHHH
Confidence 334455666666677899998888654
No 409
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=32.60 E-value=1.5e+02 Score=19.55 Aligned_cols=40 Identities=13% Similarity=0.141 Sum_probs=24.4
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhc
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEE 49 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 49 (84)
..++++++.++| +..+..+.|+--..+++..+++.+.-.|
T Consensus 197 t~~L~~eL~ekY-~vpVlpvnc~~l~~~DI~~Il~~vLyEF 236 (492)
T PF09547_consen 197 TQELAEELEEKY-DVPVLPVNCEQLREEDITRILEEVLYEF 236 (492)
T ss_pred HHHHHHHHHHHh-CCcEEEeehHHcCHHHHHHHHHHHHhcC
Confidence 344566666666 5556666666666666666666665444
No 410
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=32.35 E-value=81 Score=16.46 Aligned_cols=42 Identities=17% Similarity=0.058 Sum_probs=18.5
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHH
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQIL 46 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 46 (84)
++...-.+.+.+.++...+ ++....++..+..++....+++.
T Consensus 8 SHs~~lA~gl~~~~~~i~~--~~~i~~~gg~~d~~~gt~~~~i~ 49 (124)
T PRK14484 8 SHSKKIAEGVKDLIKQMAP--DVPIIYAGGTEDGRIGTSFDQIQ 49 (124)
T ss_pred eCcHHHHHHHHHHHHHhhC--CCCEEEecCCCCCCccchHHHHH
Confidence 3443444555555554432 34444455444333333333333
No 411
>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the C-terminal TPP binding domain of TPP enzymes.; GO: 0003824 catalytic activity, 0030976 thiamine pyrophosphate binding; PDB: 2WVA_V 1ZPD_F 2WVG_B 2WVH_B 3OE1_D 2NXW_A 2Q5L_B 2Q5Q_B 2Q5J_A 2Q5O_A ....
Probab=31.55 E-value=71 Score=16.71 Aligned_cols=42 Identities=26% Similarity=0.234 Sum_probs=26.0
Q ss_pred cCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 20 TNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 20 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
.|+..+..+..|-+=...+.++....+.+..-+-+++||.++
T Consensus 44 ~p~~~vv~i~GDG~f~~~~~el~ta~~~~~~v~~vv~nN~~~ 85 (153)
T PF02775_consen 44 RPDRPVVAITGDGSFLMSLQELATAVRYGLPVVIVVLNNGGY 85 (153)
T ss_dssp STTSEEEEEEEHHHHHHHGGGHHHHHHTTSSEEEEEEESSBS
T ss_pred cCcceeEEecCCcceeeccchhHHHhhccceEEEEEEeCCcc
Confidence 456778888888766666556555555444334445677664
No 412
>KOG1252|consensus
Probab=31.25 E-value=74 Score=19.95 Aligned_cols=15 Identities=27% Similarity=0.804 Sum_probs=13.1
Q ss_pred cCCcceEEEcccCCC
Q psy13141 49 EKHIHVLINNAGQGG 63 (84)
Q Consensus 49 ~~~id~lv~~ag~~~ 63 (84)
.+.+|++|+.+|..+
T Consensus 210 ~g~vDi~V~gaGTGG 224 (362)
T KOG1252|consen 210 DGKVDIFVAGAGTGG 224 (362)
T ss_pred cCCCCEEEeccCCCc
Confidence 578999999999865
No 413
>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=31.20 E-value=89 Score=16.59 Aligned_cols=27 Identities=7% Similarity=0.107 Sum_probs=17.1
Q ss_pred CHHHHHHHHHHHHhhcCCcceEEEccc
Q psy13141 34 SLDSVREFAAQILDEEKHIHVLINNAG 60 (84)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~id~lv~~ag 60 (84)
+++.+.+++..+++.-....+++||-+
T Consensus 107 ~~~~iD~fi~~v~~~p~~~~l~fhC~~ 133 (149)
T PF14566_consen 107 DPEDIDAFINFVKSLPKDTWLHFHCQA 133 (149)
T ss_dssp -HHHHHHHHHHHHTS-TT-EEEEE-SS
T ss_pred CHHHHHHHHHHHHhCCCCCeEEEECCC
Confidence 457788889888887445666777753
No 414
>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria. PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways. Archaea, anaerobic bacteria and eukaryotes that lack mitochondria (and therefore pyruvate dehydrogenase) use PFOR to oxidatively decarboxylate pyruvate, with ferredoxin or flavodoxin as the electron acceptor. The 36-kDa porB subunit contains the binding sites for the cofactors, TPP and a divalent metal cation, which are required for activity.
Probab=30.52 E-value=1.1e+02 Score=17.63 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=22.1
Q ss_pred EeecCCHHHHHHHHHHHHhhcCC--cceEEEccc
Q psy13141 29 KLDLASLDSVREFAAQILDEEKH--IHVLINNAG 60 (84)
Q Consensus 29 ~~D~~~~~~~~~~~~~~~~~~~~--id~lv~~ag 60 (84)
...+.+++++.+.+++..+.-++ +++.+-|.-
T Consensus 170 ~~~v~~~~el~~al~~a~~~~gP~lIev~~~C~~ 203 (235)
T cd03376 170 TASVAYPEDLYKKVKKALSIEGPAYIHILSPCPT 203 (235)
T ss_pred EEcCCCHHHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 35778899998888888765454 555555553
No 415
>PRK03670 competence damage-inducible protein A; Provisional
Probab=30.33 E-value=1.2e+02 Score=17.88 Aligned_cols=64 Identities=13% Similarity=0.089 Sum_probs=32.6
Q ss_pred HHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcC-CcceEEEcccCCCCcccCChhhhhhhhcc
Q psy13141 11 GVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEK-HIHVLINNAGQGGILNRITKDGLQLGMQI 79 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~ 79 (84)
-+.+.+... |..+.....--.+.+.+ .+.+.+... ..|++|.+-|......+.+.+-..+.+..
T Consensus 24 ~la~~L~~~--G~~v~~~~iV~Dd~~~I---~~~l~~a~~~~~DlVIttGGlGpt~dD~T~eava~a~g~ 88 (252)
T PRK03670 24 FIAQKLTEK--GYWVRRITTVGDDVEEI---KSVVLEILSRKPEVLVISGGLGPTHDDVTMLAVAEALGR 88 (252)
T ss_pred HHHHHHHHC--CCEEEEEEEcCCCHHHH---HHHHHHHhhCCCCEEEECCCccCCCCCchHHHHHHHhCC
Confidence 344555554 54444433322233444 444443323 46888888665444456666666555543
No 416
>KOG0799|consensus
Probab=30.23 E-value=1.6e+02 Score=19.08 Aligned_cols=46 Identities=17% Similarity=0.099 Sum_probs=32.6
Q ss_pred HHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceE
Q psy13141 10 NGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVL 55 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 55 (84)
+.+..-++..|.......+.+|..++...+..++.+...++.+.++
T Consensus 116 ~~verll~aiYhPqN~ycihvD~~s~~~fk~~~~~L~~cf~NV~v~ 161 (439)
T KOG0799|consen 116 EQVERLLQAIYHPQNVYCIHVDAKSPPEFRVAMQQLASCFPNVIVL 161 (439)
T ss_pred HHHHHHHHHHhCCcCcceEEECCCCCHHHHHHHHHHHhcCCceEEe
Confidence 3344445555545667788889999888888888888887766554
No 417
>TIGR03642 cas_csx13 CRISPR-associated protein, Csx13 family. This model describes a protein N-terminal protein sequence domain strictly associated with CRISPR and CRISPR-associated protein systems. This model and TIGR02584 identify two separate clades from a larger homology domain family, both CRISPR-associated, while other homologs are found that may not be. Members are found in bacteria that include Pelotomaculum thermopropionicum SI, Thermoanaerobacter tengcongensis MB4, and Roseiflexus sp. RS-1, and in archaea that include Thermoplasma volcanium, Picrophilus torridus, and Methanospirillum hungatei. The molecular function is unknown.
Probab=30.19 E-value=91 Score=16.34 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=21.9
Q ss_pred HHHHHHhhcCCceeEEEEe---ecCCHHHHHHHHHHHHhh
Q psy13141 12 VRESIITKTNNHQVVVKKL---DLASLDSVREFAAQILDE 48 (84)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~---D~~~~~~~~~~~~~~~~~ 48 (84)
+..++...++..+++.+.. |+.++++...+.+.+...
T Consensus 41 l~~~l~~~~~~~~i~~i~~~~~DI~t~~d~~~~~~~I~~~ 80 (124)
T TIGR03642 41 LKDSLLKKFYKAEVHKIPLKFDDILSDEDILTFMSIAAKE 80 (124)
T ss_pred HHHHhHHhcCCcEEEEeccCccccCCHHHHHHHHHHHHHH
Confidence 4444555555455555544 677777777766665543
No 418
>PRK09417 mogA molybdenum cofactor biosynthesis protein MogA; Provisional
Probab=30.15 E-value=1.1e+02 Score=17.28 Aligned_cols=42 Identities=7% Similarity=0.113 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhhc--CCcceEEEcccCCCCcccCChhhhhhhhc
Q psy13141 37 SVREFAAQILDEE--KHIHVLINNAGQGGILNRITKDGLQLGMQ 78 (84)
Q Consensus 37 ~~~~~~~~~~~~~--~~id~lv~~ag~~~~~~~~~~~~~~~~~~ 78 (84)
+...+.+.+.+.. ...|++|-+-|......+.+++-+...++
T Consensus 50 d~~~I~~aL~~a~~~~~~DlIITTGGtg~g~rDvTpeAv~~l~~ 93 (193)
T PRK09417 50 EQDLIEQTLIELVDEMGCDLVLTTGGTGPARRDVTPEATLAVAD 93 (193)
T ss_pred CHHHHHHHHHHHhhcCCCCEEEECCCCCCCCCCcHHHHHHHHhC
Confidence 3333444444332 36899888876654444555555555443
No 419
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=29.67 E-value=1e+02 Score=16.72 Aligned_cols=62 Identities=13% Similarity=0.235 Sum_probs=31.8
Q ss_pred HHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhh
Q psy13141 12 VRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLG 76 (84)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~ 76 (84)
+...+++. +..+..+..=-.+.+.+.+.+....+ ....|+++-+.|......+.+.+-+.+.
T Consensus 27 l~~~L~~~--G~~v~~~~iv~Dd~~~i~~~l~~~~~-~~~~DlVIttGGtg~g~~D~t~eal~~l 88 (163)
T TIGR02667 27 LVERLTEA--GHRLADRAIVKDDIYQIRAQVSAWIA-DPDVQVILITGGTGFTGRDVTPEALEPL 88 (163)
T ss_pred HHHHHHHC--CCeEEEEEEcCCCHHHHHHHHHHHHh-cCCCCEEEECCCcCCCCCCCcHHHHHHH
Confidence 33444443 44444443333344555555544322 1358988888776544445555555444
No 420
>PRK11634 ATP-dependent RNA helicase DeaD; Provisional
Probab=29.62 E-value=1.8e+02 Score=19.71 Aligned_cols=52 Identities=13% Similarity=0.127 Sum_probs=31.3
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 59 (84)
+++....+.+.+.|... +..+..+..|++..+ -...++.+++ |.+++||.+-
T Consensus 252 ~~tk~~a~~l~~~L~~~--g~~~~~lhgd~~q~~-R~~il~~Fr~--G~~~ILVATd 303 (629)
T PRK11634 252 VRTKNATLEVAEALERN--GYNSAALNGDMNQAL-REQTLERLKD--GRLDILIATD 303 (629)
T ss_pred eccHHHHHHHHHHHHhC--CCCEEEeeCCCCHHH-HHHHHHHHhC--CCCCEEEEcc
Confidence 34555566677777665 445667777776543 3445555443 5788877664
No 421
>PF12609 DUF3774: Wound-induced protein; InterPro: IPR022251 This family of proteins is found in eukaryotes. Proteins in this family are typically between 81 and 97 amino acids in length. The proteins in the family are often annotated as wound-induced proteins however there is little accompanying literature to confirm this.
Probab=29.49 E-value=18 Score=17.25 Aligned_cols=18 Identities=11% Similarity=0.080 Sum_probs=14.8
Q ss_pred cCChhhhhhhhccceecC
Q psy13141 67 RITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 67 ~~~~~~~~~~~~~n~~~~ 84 (84)
...++.++++|-.+++||
T Consensus 62 k~aEEsLRtVMyLSCWGP 79 (79)
T PF12609_consen 62 KQAEESLRTVMYLSCWGP 79 (79)
T ss_pred chhhhhhceeEEEeccCc
Confidence 456788999999999986
No 422
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=29.46 E-value=2e+02 Score=20.12 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=28.0
Q ss_pred HHHHHHHHhhc--CCceeEEEEeecCCHHHHHHHHHHHHhh
Q psy13141 10 NGVRESIITKT--NNHQVVVKKLDLASLDSVREFAAQILDE 48 (84)
Q Consensus 10 ~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 48 (84)
.+..+.+-..+ ++....++..++++..+++++++.|-..
T Consensus 436 ~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~e 476 (866)
T COG4982 436 TEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDE 476 (866)
T ss_pred HHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccc
Confidence 33444444333 2566888899999999999999998753
No 423
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=29.42 E-value=1.4e+02 Score=18.44 Aligned_cols=25 Identities=20% Similarity=0.472 Sum_probs=17.5
Q ss_pred HHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 39 REFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 39 ~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
..+..++.++.+.+|.+|.+.|..+
T Consensus 136 ~t~~~Ei~~q~~~~D~vv~~vG~Gg 160 (380)
T TIGR01127 136 GTIGLEIMEDIPDVDTVIVPVGGGG 160 (380)
T ss_pred HHHHHHHHHhCCCCCEEEEEeChHH
Confidence 3445666666777899998888643
No 424
>PF10384 Scm3: Centromere protein Scm3; InterPro: IPR018465 The centromere protein Scm3 is a non-histone component of centromeric chromatin that binds to CenH3-H4 histones, which are required for kinetochore assembly. Scm3 is required for Cse4 localisation and is required for its centromeric association [, ]. The histone H3 variant Cse4 replaces conventional histone H3 in centromeric chromatin and helps direct the assembly of the kinetochore. In addition, Scm3 has been shown in Saccharomyces cerevisiae (Baker's yeast) to be required for G2/M progression []. Scm3 is required to maintain kinetochore function throughout the cell cycle. Scm3 contains a nuclear export signal (NES). The N-terminal region of Scm3 is well conserved and functions as the CenH3-interacting domain, while the C-terminal region is variable in size and sometimes consists of DNA binding motifs [].; GO: 0005634 nucleus; PDB: 3R45_C 2YFV_C 2L5A_A.
Probab=29.31 E-value=60 Score=14.52 Aligned_cols=17 Identities=6% Similarity=0.053 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhhcCCc
Q psy13141 36 DSVREFAAQILDEEKHI 52 (84)
Q Consensus 36 ~~~~~~~~~~~~~~~~i 52 (84)
..++..++.+.++|+++
T Consensus 12 ~r~k~~~e~I~~KY~~~ 28 (58)
T PF10384_consen 12 QRFKSRWESIIEKYGQP 28 (58)
T ss_dssp HHHHHHHHHHHHHHCSG
T ss_pred HHHHHHHHHHHHHhcCc
Confidence 45677888888888875
No 425
>PF02084 Bindin: Bindin; InterPro: IPR000775 Bindin, the major protein component of the acrosome granule of sea urchin sperm, mediates species-specific adhesion of sperm to the egg surface during fertilisation [, ]. The protein coats the acrosomal process after externalisation by the acrosome reaction; it binds to sulphated, fucose-containing polysaccharides on the vitelline-layer receptor proteoglycans that cover the egg plasma membrane. Bindins from different genera show high levels of sequence similarity in both the mature bindin domain and in the probindin precursor region. The most highly conserved region is a 42-residue segment in the central portion of the mature bindin protein. This domain may be responsible for conserved functions of bindin, while the more highly divergent flanking regions may be responsible for its species-specific properties [].; GO: 0007342 fusion of sperm to egg plasma membrane
Probab=29.23 E-value=1.3e+02 Score=17.73 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=22.5
Q ss_pred HHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhh
Q psy13141 12 VRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDE 48 (84)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 48 (84)
+.+.|+..- +..-+-+.+|+-|+-++--++.-++.+
T Consensus 105 vm~~ikavL-gaTKiDLPVDINDPYDlGLLLRhLRHH 140 (238)
T PF02084_consen 105 VMEDIKAVL-GATKIDLPVDINDPYDLGLLLRHLRHH 140 (238)
T ss_pred HHHHHHHHh-cccccccccccCChhhHHHHHHHHHHH
Confidence 344444332 333344678999999988888777654
No 426
>cd01677 PFL2_DhaB_BssA Pyruvate formate lyase 2 and related enzymes. This family includes pyruvate formate lyase 2 (PFL2), B12-independent glycerol dehydratase (DhaB) and the alpha subunit of benzylsuccinate synthase (BssA), all of which have a highly conserved ten-stranded alpha/beta barrel domain, which is similar to those of PFL1 (pyruvate formate lyase 1) and RNR (ribonucleotide reductase). Pyruvate formate lyase catalyzes a key step in anaerobic glycolysis, the conversion of pyruvate and CoenzymeA to formate and acetylCoA. DhaB catalyzes the first step in the conversion of glycerol to 1,3-propanediol while BssA catalyzes the first step in the anaerobic mineralization of both toluene and m-xylene.
Probab=29.10 E-value=1.2e+02 Score=21.18 Aligned_cols=65 Identities=12% Similarity=0.085 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
.+.+...++.-+ ......++.++.+.+.+..+-+.-. ...|.+|--+|+...|.+++.+.-++.+
T Consensus 713 ~~~l~~lirtyf-~~gg~hiq~NVvd~etL~~Aqk~PE---~Y~~LiVRVaGySa~Fv~L~~~~QdeII 777 (781)
T cd01677 713 LKKLAALIRTYF-DLGGHHIQFNVVSAETLRDAQKHPE---KYRDLIVRVAGYSAYFVELSKEVQDEII 777 (781)
T ss_pred HHHHHHHHHHHH-hcCCCccccccCCHHHHHHHHhCcc---ccCCeEEEEcceEehHhhCCHHHHHHHH
Confidence 344444444433 2234557888888887655443332 2367788888887767777766555544
No 427
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=28.61 E-value=1.2e+02 Score=17.03 Aligned_cols=27 Identities=15% Similarity=0.092 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecC
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLA 33 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~ 33 (84)
.+.+.+.+.+++.+|..++..+..++.
T Consensus 75 ~Ka~~~~~~L~~lNp~v~i~~~~~~~~ 101 (198)
T cd01485 75 NRAAASYEFLQELNPNVKLSIVEEDSL 101 (198)
T ss_pred hHHHHHHHHHHHHCCCCEEEEEecccc
Confidence 355667778888877777776665554
No 428
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=28.52 E-value=1.8e+02 Score=19.22 Aligned_cols=30 Identities=30% Similarity=0.229 Sum_probs=16.1
Q ss_pred eEEEEeecCCHHHHH--HHHHHHHhhcCCcce
Q psy13141 25 VVVKKLDLASLDSVR--EFAAQILDEEKHIHV 54 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~--~~~~~~~~~~~~id~ 54 (84)
+..+.+|.++-.+.. ..++++++.++.+.+
T Consensus 261 ~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~v 292 (505)
T PLN02274 261 VDVVVLDSSQGDSIYQLEMIKYIKKTYPELDV 292 (505)
T ss_pred CCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcE
Confidence 344555666555444 566666665543443
No 429
>KOG0025|consensus
Probab=28.44 E-value=1.4e+02 Score=18.55 Aligned_cols=52 Identities=12% Similarity=0.179 Sum_probs=27.6
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
-|+....+++++.|+.. |.......-.+.+. -....+...+++-..+||.|-
T Consensus 192 VRdR~~ieel~~~Lk~l--GA~~ViTeeel~~~-----~~~k~~~~~~~prLalNcVGG 243 (354)
T KOG0025|consen 192 VRDRPNIEELKKQLKSL--GATEVITEEELRDR-----KMKKFKGDNPRPRLALNCVGG 243 (354)
T ss_pred eecCccHHHHHHHHHHc--CCceEecHHHhcch-----hhhhhhccCCCceEEEeccCc
Confidence 36667778888888765 43332222222221 122222345667777788763
No 430
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=28.43 E-value=1.1e+02 Score=17.67 Aligned_cols=18 Identities=11% Similarity=0.134 Sum_probs=13.0
Q ss_pred CccchhhHHHHHHHHHhh
Q psy13141 2 ACRDLGKANGVRESIITK 19 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~ 19 (84)
+.|..+....+.+.+++.
T Consensus 8 vTRp~~~~~~l~~~l~~~ 25 (255)
T PRK05752 8 LTRPAEECAALAASLAEA 25 (255)
T ss_pred ECCcHHHHHHHHHHHHHc
Confidence 456777777788877766
No 431
>PRK03525 crotonobetainyl-CoA:carnitine CoA-transferase; Provisional
Probab=28.41 E-value=1.6e+02 Score=18.66 Aligned_cols=31 Identities=10% Similarity=0.174 Sum_probs=21.4
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcc
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 59 (84)
=..+.+|+.+++..+.+.+-+. .-|++|+|-
T Consensus 66 Krsi~LDLk~~~Gr~~l~~Li~----~ADVvien~ 96 (405)
T PRK03525 66 LHALSLNIFKDEGREAFLKLME----TTDIFIEAS 96 (405)
T ss_pred CeeEEEeCCCHHHHHHHHHHHH----hCCEEEECC
Confidence 3567789999988665554443 468888874
No 432
>PF15513 DUF4651: Domain of unknown function (DUF4651)
Probab=28.32 E-value=72 Score=14.58 Aligned_cols=22 Identities=23% Similarity=0.211 Sum_probs=13.4
Q ss_pred HHHHHHHHHhhcCCcceEEEcc
Q psy13141 38 VREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 38 ~~~~~~~~~~~~~~id~lv~~a 59 (84)
+.+.+....+.+|.|.+|..|.
T Consensus 7 i~~~iR~~fs~lG~I~vLYvn~ 28 (62)
T PF15513_consen 7 ITAEIRQFFSQLGEIAVLYVNP 28 (62)
T ss_pred HHHHHHHHHHhcCcEEEEEEcc
Confidence 3344444455668888877665
No 433
>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL cleaves the acyloin linkage of benzoin producing 2 molecules of benzaldehyde and enabling the Pseudomonas to grow on benzoin as the sole carbon and energy source. OCoD has a role in the detoxification of oxalate, catalyzing the decarboxylation of oxalyl-CoA to formate. 2-HPCL is a peroxisomal enzyme which plays a role in the alpha-oxidation of 3-methyl-branched fatty acids, catalyzing the cleavage of 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde. All these enzymes depend on Mg2+ and TPP for activity.
Probab=28.03 E-value=1.1e+02 Score=16.45 Aligned_cols=41 Identities=24% Similarity=0.071 Sum_probs=23.9
Q ss_pred CCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 21 NNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 21 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
|+..+..+..|-+-.....++.........-+-+++||.++
T Consensus 65 ~~~~vv~i~GDG~f~~~~~el~ta~~~~lpv~ivv~NN~~~ 105 (172)
T cd02004 65 PDKRVVLVEGDGAFGFSGMELETAVRYNLPIVVVVGNNGGW 105 (172)
T ss_pred CCCeEEEEEcchhhcCCHHHHHHHHHcCCCEEEEEEECccc
Confidence 35568888888765555566554433333334456677664
No 434
>PRK10689 transcription-repair coupling factor; Provisional
Probab=27.92 E-value=2.6e+02 Score=20.82 Aligned_cols=52 Identities=8% Similarity=0.191 Sum_probs=32.7
Q ss_pred chhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcc
Q psy13141 5 DLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 59 (84)
+.+..+.+.+.+....|+.++..+..++.. +...+.+...++ |.+++||++.
T Consensus 818 ~i~~ie~la~~L~~~~p~~~v~~lHG~m~q-~eRe~im~~Fr~--Gk~~VLVaTd 869 (1147)
T PRK10689 818 DVENIQKAAERLAELVPEARIAIGHGQMRE-RELERVMNDFHH--QRFNVLVCTT 869 (1147)
T ss_pred CHHHHHHHHHHHHHhCCCCcEEEEeCCCCH-HHHHHHHHHHHh--cCCCEEEECc
Confidence 344556667777776666667777777654 445555555543 5688887765
No 435
>PF08303 tRNA_lig_kinase: tRNA ligase kinase domain; InterPro: IPR015966 This entry represents a kinase domain found in fungal tRNA ligases []. Please see the following relevant references: [, ].; GO: 0003972 RNA ligase (ATP) activity, 0005524 ATP binding, 0006388 tRNA splicing, via endonucleolytic cleavage and ligation
Probab=27.77 E-value=1.2e+02 Score=16.91 Aligned_cols=10 Identities=20% Similarity=0.524 Sum_probs=4.4
Q ss_pred hhhhhhhccc
Q psy13141 71 DGLQLGMQID 80 (84)
Q Consensus 71 ~~~~~~~~~n 80 (84)
..++.+++.+
T Consensus 157 ~~FD~vI~L~ 166 (168)
T PF08303_consen 157 SGFDHVIDLD 166 (168)
T ss_pred cccCEeEeCc
Confidence 3444444443
No 436
>PRK07877 hypothetical protein; Provisional
Probab=27.76 E-value=2.2e+02 Score=19.93 Aligned_cols=45 Identities=22% Similarity=0.178 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcc
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 59 (84)
.+.+.+++.+.+.+|..++..+...++ .+.+.+++ ...|++|.|.
T Consensus 160 ~Kv~~a~~~l~~inp~i~v~~~~~~i~-~~n~~~~l-------~~~DlVvD~~ 204 (722)
T PRK07877 160 NKAVVAARRIAELDPYLPVEVFTDGLT-EDNVDAFL-------DGLDVVVEEC 204 (722)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHh-------cCCCEEEECC
Confidence 456667778887777777777777666 45555544 2356666554
No 437
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=27.74 E-value=1e+02 Score=16.10 Aligned_cols=28 Identities=21% Similarity=0.362 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhh--cCCcceEEEcccCCC
Q psy13141 36 DSVREFAAQILDE--EKHIHVLINNAGQGG 63 (84)
Q Consensus 36 ~~~~~~~~~~~~~--~~~id~lv~~ag~~~ 63 (84)
+.+....+.+... ..+--+++|++|...
T Consensus 79 daI~~va~~La~~~~~~~g~iVvHtSGa~~ 108 (127)
T PF10727_consen 79 DAIAEVAEQLAQYGAWRPGQIVVHTSGALG 108 (127)
T ss_dssp CHHHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred HHHHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence 4788888888765 344558999999765
No 438
>TIGR03438 probable methyltransferase. This model represents a distinct set of uncharacterized proteins found in the bacteria. Analysis by PSI-BLAST shows remote sequence homology to methyltransferases
Probab=27.41 E-value=1.5e+02 Score=17.82 Aligned_cols=29 Identities=7% Similarity=-0.031 Sum_probs=14.0
Q ss_pred hhhHHHHHHHHHhhcCCceeEEEEeecCC
Q psy13141 6 LGKANGVRESIITKTNNHQVVVKKLDLAS 34 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 34 (84)
.+-++.+.+.+...+|+.++..+..|+.+
T Consensus 98 ~~mL~~a~~~l~~~~p~~~v~~i~gD~~~ 126 (301)
T TIGR03438 98 ADALKESAAALAADYPQLEVHGICADFTQ 126 (301)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEEEcccc
Confidence 33444445555444444445555555543
No 439
>KOG1412|consensus
Probab=27.34 E-value=1.6e+02 Score=18.55 Aligned_cols=41 Identities=10% Similarity=0.068 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhhcCCcceEEEcc-cCCCCcccCChhhhhhhhc
Q psy13141 37 SVREFAAQILDEEKHIHVLINNA-GQGGILNRITKDGLQLGMQ 78 (84)
Q Consensus 37 ~~~~~~~~~~~~~~~id~lv~~a-g~~~~~~~~~~~~~~~~~~ 78 (84)
+++.+...+...- .-.+++..+ +...-..+.++++|....+
T Consensus 164 d~e~~Lsdl~~AP-e~si~iLhaCAhNPTGmDPT~EQW~qia~ 205 (410)
T KOG1412|consen 164 DLEGFLSDLESAP-EGSIIILHACAHNPTGMDPTREQWKQIAD 205 (410)
T ss_pred cHHHHHHHHhhCC-CCcEEeeeccccCCCCCCCCHHHHHHHHH
Confidence 3566666665542 223333333 2322234667778876554
No 440
>PRK07048 serine/threonine dehydratase; Validated
Probab=27.33 E-value=1.3e+02 Score=18.13 Aligned_cols=23 Identities=26% Similarity=0.440 Sum_probs=15.1
Q ss_pred HHHHHHhhcCCcceEEEcccCCC
Q psy13141 41 FAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 41 ~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
...++.++.+.+|.+|..+|..+
T Consensus 162 ~~~EI~~q~~~~D~vv~~vGtGG 184 (321)
T PRK07048 162 AAKELFEEVGPLDALFVCLGGGG 184 (321)
T ss_pred HHHHHHhhcCCCCEEEEecChhH
Confidence 34555555567888888887643
No 441
>PRK08291 ectoine utilization protein EutC; Validated
Probab=27.28 E-value=1.5e+02 Score=18.03 Aligned_cols=18 Identities=22% Similarity=0.254 Sum_probs=11.9
Q ss_pred CccchhhHHHHHHHHHhh
Q psy13141 2 ACRDLGKANGVRESIITK 19 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~ 19 (84)
++|+.++.+.+.+++++.
T Consensus 163 ~~R~~~~a~~l~~~~~~~ 180 (330)
T PRK08291 163 WARDAAKAEAYAADLRAE 180 (330)
T ss_pred EcCCHHHHHHHHHHHhhc
Confidence 567777777777666543
No 442
>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl). E. coli glyoxylate carboligase, plays a key role in glyoxylate metabolism where it catalyzes the condensation of two molecules of glyoxylate to give tartronic semialdehyde and carbon dioxide. This enzyme requires TPP, magnesium ion and FAD as cofactors.
Probab=27.24 E-value=1.2e+02 Score=16.85 Aligned_cols=41 Identities=32% Similarity=0.226 Sum_probs=24.2
Q ss_pred CCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 21 NNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 21 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
|+..+..+..|-+=.-.+.++.-..+....-+-+++||.|+
T Consensus 74 p~~~vv~i~GDG~f~m~~~eL~Ta~~~~lpviivV~NN~~y 114 (202)
T cd02006 74 PDRQVVALSGDYDFQFMIEELAVGAQHRIPYIHVLVNNAYL 114 (202)
T ss_pred CCCeEEEEEeChHhhccHHHHHHHHHhCCCeEEEEEeCchH
Confidence 45567778888665555555555444344444556677765
No 443
>PF06569 DUF1128: Protein of unknown function (DUF1128); InterPro: IPR009507 This family consists of several short, hypothetical bacterial proteins of unknown function.
Probab=27.23 E-value=48 Score=15.59 Aligned_cols=13 Identities=15% Similarity=0.289 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHhh
Q psy13141 36 DSVREFAAQILDE 48 (84)
Q Consensus 36 ~~~~~~~~~~~~~ 48 (84)
+.+...+..|+++
T Consensus 7 ENv~~MIe~Ik~K 19 (71)
T PF06569_consen 7 ENVEYMIEEIKQK 19 (71)
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444443
No 444
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=27.10 E-value=98 Score=15.75 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=22.3
Q ss_pred EEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 28 KKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 28 ~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
+..|++.++.+...++...++ ...+++-+.|+
T Consensus 70 VvIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~ 101 (124)
T PF01113_consen 70 VVIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF 101 (124)
T ss_dssp EEEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred EEEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence 446999999998888888776 56677767766
No 445
>KOG1099|consensus
Probab=26.74 E-value=1.4e+02 Score=17.94 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=21.4
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCC--cceEEEcccC
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKH--IHVLINNAGQ 61 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~--id~lv~~ag~ 61 (84)
..+..++.|++.....++++ +++|+ -|+ |.|-|.
T Consensus 89 ~GV~qlq~DIT~~stae~Ii----~hfggekAdl-VvcDGA 124 (294)
T KOG1099|consen 89 EGVIQLQGDITSASTAEAII----EHFGGEKADL-VVCDGA 124 (294)
T ss_pred CceEEeecccCCHhHHHHHH----HHhCCCCccE-EEeCCC
Confidence 35778899999887655544 44543 454 445554
No 446
>PRK07058 acetate kinase; Provisional
Probab=26.40 E-value=1.3e+02 Score=19.27 Aligned_cols=14 Identities=21% Similarity=0.335 Sum_probs=12.5
Q ss_pred cCCcceEEEcccCC
Q psy13141 49 EKHIHVLINNAGQG 62 (84)
Q Consensus 49 ~~~id~lv~~ag~~ 62 (84)
.|++|.+|..+|+.
T Consensus 316 Lg~vDaiVfTGGIg 329 (396)
T PRK07058 316 LGGLDAVVFTAGIG 329 (396)
T ss_pred hCCCCEEEECCccc
Confidence 47899999999987
No 447
>TIGR01255 pyr_form_ly_1 formate acetyltransferase 1. This model describes formate acetyltransferase 1. More distantly related putative formate acetyltransferases have also been identified, including formate acetyltransferase 2 from E. coli, which is excluded from this model.
Probab=26.22 E-value=2.2e+02 Score=20.07 Aligned_cols=66 Identities=9% Similarity=0.018 Sum_probs=42.1
Q ss_pred hHHHHHHHHHhhcCC-----ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 8 KANGVRESIITKTNN-----HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 8 ~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
....+...++.-+ . .....++.++-+.+.+..+.+.-.+ ..+.+|--+|+.-.|.+++.+.-++++
T Consensus 666 ~~~~l~~ll~~yf-~~~~~~~gg~Hiq~NVv~~etL~dAq~~PE~---Y~~LiVRVaGYsa~Fv~L~ke~QdeII 736 (744)
T TIGR01255 666 RVDNLVQIMDGYF-TPGALINGGQHLNVNVMNREDLYDAMMNPEK---YPDLTIRVSGYAVNFNYLTKEQQQEVI 736 (744)
T ss_pred HHHHHHHHHHHHh-cccccccCCcccccCcCCHHHHHHHHhChhh---cCCeEEEEcceEeehhhCCHHHHHHHH
Confidence 3444555555433 2 3457788899988877655444322 367888889987777777776666554
No 448
>PRK11127 autonomous glycyl radical cofactor GrcA; Provisional
Probab=26.14 E-value=1.1e+02 Score=16.10 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=33.3
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
...++.++.+.+.+..+.+.-. ...+.+|--+|+.-.|.+++++.-++.+
T Consensus 70 G~Hlq~NVvd~etL~dAqk~PE---kYpdLiVRVsGYSa~F~~Lt~e~Q~eVI 119 (127)
T PRK11127 70 GQHLNVNVLRRETLEDAVKHPE---KYPQLTIRVSGYAVRFNSLTPEQQRDVI 119 (127)
T ss_pred ceEEEEEecCHHHHHHHHhChh---cCCCeEEEEeeEEeehhhCCHHHHHHHH
Confidence 4567788888887755543332 3477888888887767777766655544
No 449
>TIGR00057 Sua5/YciO/YrdC/YwlC family protein. partial match to sua5, which is involved in regulation of translation initiation. 3' end of sua5 has matches to sua5, BS3690, and weakly to AF0781 and BB0734.
Probab=26.14 E-value=75 Score=17.84 Aligned_cols=19 Identities=26% Similarity=0.144 Sum_probs=10.6
Q ss_pred eEEEEeecCCHHHHHHHHH
Q psy13141 25 VVVKKLDLASLDSVREFAA 43 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~ 43 (84)
+..+.||..+.+.++++.+
T Consensus 31 vYgL~~~~~~~~av~ri~~ 49 (201)
T TIGR00057 31 VYGIGADALDEDAVRRLYR 49 (201)
T ss_pred HHHhhcCCCCHHHHHHHHH
Confidence 3445566666666655543
No 450
>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]
Probab=25.85 E-value=1.7e+02 Score=18.12 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=30.2
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+|++..++...+.+..- +.++..+...+++. ....... ..+.+|+++.--|+..
T Consensus 55 DrD~~Ai~~a~~~l~~~--~~r~~~v~~~F~~l---~~~l~~~--~i~~vDGiL~DLGVSS 108 (314)
T COG0275 55 DRDPQAIAIAKERLKEF--DGRVTLVHGNFANL---AEALKEL--GIGKVDGILLDLGVSS 108 (314)
T ss_pred cCCHHHHHHHHHHhhcc--CCcEEEEeCcHHHH---HHHHHhc--CCCceeEEEEeccCCc
Confidence 45555555555444433 56788777665432 2222221 1357899888888654
No 451
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=25.85 E-value=2.2e+02 Score=19.40 Aligned_cols=53 Identities=17% Similarity=0.202 Sum_probs=35.2
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEccc
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 60 (84)
+.+....+.+.+.+... +..+..+..++.+.+ +..++.... .+.+.++|.+.+
T Consensus 237 c~sRk~~E~ia~~L~~~--g~~a~~YHaGl~~~e--R~~~q~~f~-~~~~~iiVAT~A 289 (590)
T COG0514 237 CLTRKKVEELAEWLRKN--GISAGAYHAGLSNEE--RERVQQAFL-NDEIKVMVATNA 289 (590)
T ss_pred EeeHHhHHHHHHHHHHC--CCceEEecCCCCHHH--HHHHHHHHh-cCCCcEEEEecc
Confidence 45566778888888887 667778888887643 344443333 356788887764
No 452
>cd03522 MoeA_like MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.
Probab=25.79 E-value=1.7e+02 Score=17.99 Aligned_cols=60 Identities=13% Similarity=0.159 Sum_probs=31.2
Q ss_pred HHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhh
Q psy13141 12 VRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQL 75 (84)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~ 75 (84)
+.+.++.. +..+.....=-.+.+.+.+.+....+. ..|++|.+.|......+.+++-+++
T Consensus 184 l~~~L~~~--G~~v~~~~iv~Dd~~~I~~ai~~~~~~--g~DlIItTGGtsvg~~D~tp~Ai~~ 243 (312)
T cd03522 184 LRARLAAL--GVELVEQVIVPHDEAAIAAAIAEALEA--GAELLILTGGASVDPDDVTPAAIRA 243 (312)
T ss_pred HHHHHHHC--CCEEEEEEEcCCCHHHHHHHHHHHhcC--CCCEEEEeCCcccCCcchHHHHHHh
Confidence 33444443 444444333233445555555444322 3699998888765445555555544
No 453
>PRK09983 pflD putative formate acetyltransferase 2; Provisional
Probab=25.73 E-value=1.6e+02 Score=20.68 Aligned_cols=65 Identities=11% Similarity=0.122 Sum_probs=38.5
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
++++...++.-+ ......++.++.+.+.+..+-+.-. ...|.+|--+|+...|.+++.+.-++.+
T Consensus 694 ~~~l~~lirtyf-~~gg~hiQfNVvd~~tL~dAqk~PE---~Y~~LiVRVaGySa~Fv~L~~~~QdeII 758 (765)
T PRK09983 694 LRKLADFLRAFT-QLKLQHIQFNVVNADTLREAQQRPQ---DYAGLVVRVAGYSAFFVELSKEIQDDII 758 (765)
T ss_pred HHHHHHHHHHHH-hcCCCccccCcCCHHHHHHHHhChh---hcCCeEEEEcceehhHhhCCHHHHHHHH
Confidence 444555555433 2334667788888877655443332 2367888888887666666655544443
No 454
>PRK08611 pyruvate oxidase; Provisional
Probab=25.62 E-value=2e+02 Score=19.10 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=28.4
Q ss_pred CCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 21 NNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 21 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
|+..+..+..|-+=.-.+.++.-..+....-+-+++||.|+.
T Consensus 425 p~~~Vv~i~GDGsf~m~~~eL~Ta~r~~l~~iivV~NN~~~g 466 (576)
T PRK08611 425 PDRQAIAICGDGGFSMVMQDFVTAVKYKLPIVVVVLNNQQLA 466 (576)
T ss_pred CCCcEEEEEcccHHhhhHHHHHHHHHhCCCeEEEEEeCCcch
Confidence 456788889998777777777655554444455677777653
No 455
>PF07845 DUF1636: Protein of unknown function (DUF1636); InterPro: IPR012863 The sequences featured in this family are derived from a number of hypothetical prokaryotic proteins. The region in question is approximately 130 amino acids long.
Probab=25.53 E-value=1e+02 Score=15.89 Aligned_cols=34 Identities=12% Similarity=-0.098 Sum_probs=23.8
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEE
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKHIHVLI 56 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv 56 (84)
++..++-.|+...++...+++.........|++|
T Consensus 64 gK~tYlfGdl~p~~~a~~il~~a~~Y~~s~dG~v 97 (116)
T PF07845_consen 64 GKWTYLFGDLDPDEDAEDILAFAALYAASPDGLV 97 (116)
T ss_pred CCcEEEEecCCcccCHHHHHHHHHHHHhCCCCcc
Confidence 3456677788776788888887777666666654
No 456
>PRK08811 uroporphyrinogen-III synthase; Validated
Probab=25.33 E-value=1.6e+02 Score=17.44 Aligned_cols=25 Identities=12% Similarity=0.260 Sum_probs=17.2
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEE
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVK 28 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~ 28 (84)
+.|..+..+.+.+.+++. |..+..+
T Consensus 23 vTRp~~q~~~l~~~L~~~--G~~~~~~ 47 (266)
T PRK08811 23 SLRPSGEHAPLRRAVARH--GGRLLAL 47 (266)
T ss_pred EeCCHHHHHHHHHHHHHC--CCcEEEc
Confidence 457777888888888877 5444443
No 457
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=25.32 E-value=65 Score=13.10 Aligned_cols=22 Identities=5% Similarity=0.184 Sum_probs=13.0
Q ss_pred HHHHHHHh-hcCCcceEEEcccC
Q psy13141 40 EFAAQILD-EEKHIHVLINNAGQ 61 (84)
Q Consensus 40 ~~~~~~~~-~~~~id~lv~~ag~ 61 (84)
.+.+.+.. .||.+-++|++.-+
T Consensus 5 ~I~~~l~~i~yGsV~iiiqdG~v 27 (38)
T PF10055_consen 5 KILEALKSIRYGSVTIIIQDGRV 27 (38)
T ss_pred HHHHHHhcCCcceEEEEEECCEE
Confidence 33344443 47888888877543
No 458
>cd06403 PB1_Par6 The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The
Probab=25.08 E-value=96 Score=14.96 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=26.5
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhc--CCcceEEEcccC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEE--KHIHVLINNAGQ 61 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~lv~~ag~ 61 (84)
+....-+..|-....+.+++..-+...+ +.++.++.=+-.
T Consensus 8 daEfRRFsl~r~~~~~f~ef~~ll~~lH~l~~~~f~i~Y~D~ 49 (80)
T cd06403 8 DAEFRRFSLDRNKPGKFEDFYKLLEHLHHIPNVDFLIGYTDP 49 (80)
T ss_pred CCeEEEEEeccccCcCHHHHHHHHHHHhCCCCCcEEEEEeCC
Confidence 5567777788776677777777766644 567777654444
No 459
>PRK05074 inosine/xanthosine triphosphatase; Reviewed
Probab=24.99 E-value=1.4e+02 Score=16.70 Aligned_cols=46 Identities=9% Similarity=0.107 Sum_probs=28.0
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEee---------cCCHHHHHHHHHHHHh
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLD---------LASLDSVREFAAQILD 47 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D---------~~~~~~~~~~~~~~~~ 47 (84)
.++|+.+.+.+.+.+...+|+..+.+...| +++.+.+..+....+.
T Consensus 8 gS~NP~Ki~Av~~af~~~f~~~~~~v~~v~v~SgV~~QP~g~eET~~GA~nRA~~ 62 (173)
T PRK05074 8 ASTNPAKINAILQAFSEIFPEGSCHIEGVAVPSGVPDQPMGSEETRAGARNRVKN 62 (173)
T ss_pred eCCCHHHHHHHHHHHHHhcCCCceEEEEeecCCCcCCCCCChHHHHHHHHHHHHH
Confidence 467888888888888877765554444444 3344555555544443
No 460
>cd06399 PB1_P40 The PB1 domain is essential part of the p40 adaptor protein which plays an important role in activating phagocyte NADPH oxidase during phagocytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes , such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The PB1 domain of p40 represents a type I PB1 domain which interacts with the PB1 domain of oxidase activator p67 w
Probab=24.87 E-value=1e+02 Score=15.22 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=24.6
Q ss_pred EEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcc
Q psy13141 26 VVKKLDLASLDSVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 26 ~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 59 (84)
..+.-|++.-...+.++.-++..+++-|+..|=-
T Consensus 18 i~vee~l~~~P~~kdLl~lmr~~f~~~dIaLNYr 51 (92)
T cd06399 18 IAVEEDLSSTPLLKDLLELTRREFQREDIALNYR 51 (92)
T ss_pred eEeecccccCccHHHHHHHHHHHhchhheeeeee
Confidence 3455677777778888888888888777765543
No 461
>PF01205 UPF0029: Uncharacterized protein family UPF0029; InterPro: IPR001498 The Impact protein is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. This entry represents the N-terminal domain of the Impact proteins.; PDB: 1VI7_A 2CVE_A.
Probab=24.75 E-value=1.1e+02 Score=15.57 Aligned_cols=29 Identities=17% Similarity=0.319 Sum_probs=22.4
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhhcCC
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDEEKH 51 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 51 (84)
+.+....+.+.+.++++.+++.++..+..
T Consensus 4 S~Fia~~~~v~s~~~~~~~l~~l~~~~~~ 32 (110)
T PF01205_consen 4 SKFIAHAAPVESEEEAEEFLEELKKEHKK 32 (110)
T ss_dssp EEEEEEEEE-SCHHHHHHHHHHHHHH-TT
T ss_pred CEEEEEEEEcCCHHHHHHHHHHHHhhCCC
Confidence 45677778999999999999999987654
No 462
>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only]
Probab=24.71 E-value=2.3e+02 Score=19.14 Aligned_cols=41 Identities=24% Similarity=0.172 Sum_probs=31.2
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+.++..+..|=+---.++++-..++....++-.++||-|+.
T Consensus 429 drR~IL~iGDGs~QlTvQEiStmiR~gl~p~ifvlNN~GYT 469 (557)
T COG3961 429 DRRVILFIGDGSLQLTVQEISTMIRWGLKPIIFVLNNDGYT 469 (557)
T ss_pred CccEEEEEcCchhhhhHHHHHHHHHcCCCcEEEEEcCCCcE
Confidence 56788888887766667777777766667788899999864
No 463
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=24.69 E-value=1.4e+02 Score=16.70 Aligned_cols=30 Identities=13% Similarity=0.107 Sum_probs=18.0
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
+..+.+|+.+.+++.+.+ ...|.++++.+.
T Consensus 45 ~~vv~~d~~~~~~l~~al-------~g~d~v~~~~~~ 74 (233)
T PF05368_consen 45 AEVVEADYDDPESLVAAL-------KGVDAVFSVTPP 74 (233)
T ss_dssp TEEEES-TT-HHHHHHHH-------TTCSEEEEESSC
T ss_pred ceEeecccCCHHHHHHHH-------cCCceEEeecCc
Confidence 455688888777765555 356777766664
No 464
>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions. POX decarboxylates pyruvate, producing hydrogen peroxide and the energy-storage metabolite acetylphosphate. It requires FAD in addition to TPP and a divalent cation as cofactors.
Probab=24.61 E-value=1.3e+02 Score=16.30 Aligned_cols=40 Identities=18% Similarity=0.097 Sum_probs=25.1
Q ss_pred CceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 22 NHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 22 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
+..+..+..|-+-.-.+.++....+....-+-+++||.++
T Consensus 69 ~~~vv~i~GDG~f~~~~~el~t~~~~~lp~~~iv~NN~~~ 108 (178)
T cd02014 69 DRQVIALSGDGGFAMLMGDLITAVKYNLPVIVVVFNNSDL 108 (178)
T ss_pred CCcEEEEEcchHHHhhHHHHHHHHHhCCCcEEEEEECCch
Confidence 4567888888777766667655444444334456677654
No 465
>PF02514 CobN-Mg_chel: CobN/Magnesium Chelatase; InterPro: IPR003672 This family contains a domain common to the cobN protein and to magnesium protoporphyrin chelatase. CobN may play a role in cobalt insertion reactions and is implicated in the conversion of precorrin-2 to cobyrinic acid in cobalamin biosynthesis []. Magnesium protoporphyrin chelatase is involved in chlorophyll biosynthesis as the third subunit of light-independent protochlorophyllide reductase in bacteria and plants [].; GO: 0009058 biosynthetic process
Probab=24.59 E-value=3e+02 Score=20.44 Aligned_cols=55 Identities=9% Similarity=0.166 Sum_probs=33.9
Q ss_pred cchhhHHHHHHHHHhhcCCceeEEEEeec--CCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 4 RDLGKANGVRESIITKTNNHQVVVKKLDL--ASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 4 r~~~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
.+.+..+.+.+.+++. |..+..+-+.- ...+.+..++..- ....+|.+|+..++.
T Consensus 86 g~~~~vdaLI~~LE~~--G~nvipvf~~~~~~~~~~i~~~f~~~--g~~~vDaIIn~~~f~ 142 (1098)
T PF02514_consen 86 GNTAVVDALIRALEER--GLNVIPVFCSSGPDSQEAIEDYFMDD--GKPRVDAIINLTGFS 142 (1098)
T ss_pred CCcHHHHHHHHHHHHC--CCeEEEEEecCccchHHHHHHHHhhc--CCCCceEEEEcCccc
Confidence 3455677888888887 66666665542 3334444444332 234699999888753
No 466
>KOG1411|consensus
Probab=24.53 E-value=1.5e+02 Score=18.89 Aligned_cols=43 Identities=7% Similarity=0.049 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhhcc
Q psy13141 37 SVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGMQI 79 (84)
Q Consensus 37 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~ 79 (84)
++..+++.+.+.-+.--++.|.++...-..+-+.++|++..++
T Consensus 184 d~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~ 226 (427)
T KOG1411|consen 184 DFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDL 226 (427)
T ss_pred chHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHH
Confidence 3556666666654434445555544332346677888776554
No 467
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=24.29 E-value=1e+02 Score=18.87 Aligned_cols=17 Identities=18% Similarity=0.087 Sum_probs=13.1
Q ss_pred hhcCCcceEEEcccCCC
Q psy13141 47 DEEKHIHVLINNAGQGG 63 (84)
Q Consensus 47 ~~~~~id~lv~~ag~~~ 63 (84)
+.+...|++|+.||...
T Consensus 74 ~~l~~aDiVI~tAG~~~ 90 (325)
T cd01336 74 EAFKDVDVAILVGAMPR 90 (325)
T ss_pred HHhCCCCEEEEeCCcCC
Confidence 33457899999999865
No 468
>TIGR02025 BchH magnesium chelatase, H subunit. This model represents the H subunit of the magnesium chelatase complex responsible for magnesium insertion into the protoporphyrin IX ring in the biosynthesis of both chlorophyll and bacteriochlorophyll. In chlorophyll-utilizing species, this gene is known as ChlH, while in bacteriochlorophyll-utilizing spoecies it is called BchH. Subunit H is the largest (~140kDa) of the three subunits (the others being BchD/ChlD and BchI/ChlI), and is known to bind protoporphyrin IX. Subunit H is homologous to the CobN subunit of cobaltochelatase and by anology with that enzyme, subunit H is believed to also bind the magnesium ion which is inserted into the ring. In conjunction with the hydrolysis of ATP by subunits I and D, a conformation change is believed to happen in subunit H causing the magnesium ion insertion into the distorted protoporphyrin ring.
Probab=24.27 E-value=3.2e+02 Score=20.63 Aligned_cols=56 Identities=13% Similarity=0.116 Sum_probs=32.8
Q ss_pred chhhHHHHHHHHHhhcCCceeEEEEe-ecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 5 DLGKANGVRESIITKTNNHQVVVKKL-DLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+....+.+.+.++++ |.++..+-+ -+.....+++++.........+|.+|+..|+.
T Consensus 255 ~~~~~dalI~~lE~~--G~~vipvf~~gl~~~~~v~~~~~~~~~~~~~vdaiI~~~gF~ 311 (1216)
T TIGR02025 255 NQAHYDNLIRELEAA--GLQVVPAFSGGLDGRVAVEDFFMKDSTPSVKVDAVVSLTGFS 311 (1216)
T ss_pred CcHHHHHHHHHHHHC--CCcEEEEEecCccccHHHHHHHHhcccCCCCccEEEECCchh
Confidence 445667788888877 555554433 23333456666543211112689999988753
No 469
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=24.08 E-value=1.7e+02 Score=17.39 Aligned_cols=12 Identities=8% Similarity=0.360 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHh
Q psy13141 36 DSVREFAAQILD 47 (84)
Q Consensus 36 ~~~~~~~~~~~~ 47 (84)
++-.++++.+.+
T Consensus 54 ~Er~~~~~~~~~ 65 (292)
T PRK03170 54 EEHEELIRAVVE 65 (292)
T ss_pred HHHHHHHHHHHH
Confidence 344444444444
No 470
>PF00479 G6PD_N: Glucose-6-phosphate dehydrogenase, NAD binding domain; InterPro: IPR022674 Glucose-6-phosphate dehydrogenase (1.1.1.49 from EC) (G6PDH) is a ubiquitous protein, present in bacteria and all eukaryotic cell types []. The enzyme catalyses the the first step in the pentose pathway, i.e. the conversion of glucose-6-phosphate to gluconolactone 6-phosphate in the presence of NADP, producing NADPH. The ubiquitous expression of the enzyme gives it a major role in the production of NADPH for the many NADPH-mediated reductive processes in all cells []. Deficiency of G6PDH is a common genetic abnormality affecting millions of people worldwide. Many sequence variants, most caused by single point mutations, are known, exhibiting a wide variety of phenotypes []. This entry represents the NAD-binding domain of glucose-6-phosphate dehydrogenase.; GO: 0004345 glucose-6-phosphate dehydrogenase activity, 0050661 NADP binding, 0006006 glucose metabolic process, 0055114 oxidation-reduction process; PDB: 4EM5_C 4E9I_A 2DPG_A 1E77_A 1E7M_A 1H9B_A 1E7Y_A 1DPG_B 1H93_A 1H9A_A ....
Probab=24.07 E-value=1.4e+02 Score=16.58 Aligned_cols=26 Identities=8% Similarity=0.029 Sum_probs=18.0
Q ss_pred ceeEEEEeecCCHHHHHHHHHHHHhh
Q psy13141 23 HQVVVKKLDLASLDSVREFAAQILDE 48 (84)
Q Consensus 23 ~~~~~~~~D~~~~~~~~~~~~~~~~~ 48 (84)
..+.+++.|+.++++..++.+.+.+.
T Consensus 72 ~~~~Y~~~d~~~~~~y~~L~~~l~~~ 97 (183)
T PF00479_consen 72 SRLHYVQGDYDDPESYAALKKALEEL 97 (183)
T ss_dssp TTEEEEE--SS-HHHHHHHHHHHHHH
T ss_pred hccEEEeCCCCCchhHHHHHHHHHHh
Confidence 46899999999999888877766653
No 471
>PRK02301 putative deoxyhypusine synthase; Provisional
Probab=24.04 E-value=1.9e+02 Score=17.94 Aligned_cols=35 Identities=14% Similarity=0.308 Sum_probs=25.2
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
+..+...+.. ..++.++..+.++ +-+|++|..+|.
T Consensus 61 fL~~tg~mvs-aGlr~ii~~Li~~-~~VD~iVtTgan 95 (316)
T PRK02301 61 FFGLAGAMVP-AGMRGIVSDLIRD-GHIDVLVTTGAN 95 (316)
T ss_pred EEEcccchhH-HHHHHHHHHHHHc-CCeeEEEcCCCc
Confidence 4445556554 6788888887765 679999988875
No 472
>cd01972 Nitrogenase_VnfE_like Nitrogenase_VnfE_like: VnfE subunit of the VnfEN complex_like. This group in addition to VnfE contains a subset of the alpha subunit of the nitrogenase MoFe protein and NifE-like proteins. The nitrogenase enzyme system catalyzes the ATP-dependent reduction of dinitrogen to ammonia. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of MoFe protein of the molybdenum(Mo)-nitrogenase. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to NifEN where it is further processed to FeMoco. VnfEN may similarly be a scaffolding protein for the iron-vanadium cofactor (FeVco) of the vanadium-dependent (V)-nitrogenase. NifE and NifN are essential for the Mo-nitrogenase, VnfE and VnfN are not essential for the V-nitrogenase. NifE and NifN can substitute when the vnfEN genes are inactivated.
Probab=24.03 E-value=2e+02 Score=18.27 Aligned_cols=57 Identities=14% Similarity=0.070 Sum_probs=31.9
Q ss_pred hhhHHHHHHHHHhhcCCceeEEE-E-e-ecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 6 LGKANGVRESIITKTNNHQVVVK-K-L-DLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~-~-D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
.+++.+...++.+.+. .++.++ . | .-.--++++.+++.+.+..+..-+.|++.|+.+
T Consensus 74 ~~kL~~aI~~~~~~~~-P~~I~V~ttC~~~iIGdDi~~v~~~~~~~~~~pvi~v~t~gf~g 133 (426)
T cd01972 74 EKKLEDTIKEAYSRYK-PKAIFVATSCATGIIGDDVESVVEELEDEIGIPVVALHCEGFKG 133 (426)
T ss_pred HHHHHHHHHHHHHhCC-CCEEEEECCChHHHhccCHHHHHHHHHHhhCCCEEEEeCCccCC
Confidence 3566666666666552 232222 1 1 111125677788877766665556677777755
No 473
>KOG0071|consensus
Probab=23.79 E-value=1.4e+02 Score=16.41 Aligned_cols=39 Identities=15% Similarity=0.095 Sum_probs=27.8
Q ss_pred HHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhh
Q psy13141 10 NGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDE 48 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 48 (84)
+.++...+.-|++.+...+..|-++.+.++++-.++-..
T Consensus 72 d~iRplWrhYy~gtqglIFV~Dsa~~dr~eeAr~ELh~i 110 (180)
T KOG0071|consen 72 DKIRPLWRHYYTGTQGLIFVVDSADRDRIEEARNELHRI 110 (180)
T ss_pred hhhhHHHHhhccCCceEEEEEeccchhhHHHHHHHHHHH
Confidence 445566666677777778888988888887776666553
No 474
>PRK07476 eutB threonine dehydratase; Provisional
Probab=23.79 E-value=1.8e+02 Score=17.63 Aligned_cols=25 Identities=12% Similarity=0.211 Sum_probs=16.5
Q ss_pred HHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 38 VREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 38 ~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
...+..++.++.+.+|.+|..+|..
T Consensus 154 ~~t~~~Ei~~Q~~~~d~iv~~vG~G 178 (322)
T PRK07476 154 QGTIGLEILEALPDVATVLVPLSGG 178 (322)
T ss_pred hhHHHHHHHHhCcCCCEEEEEcChH
Confidence 3455566666666678888887754
No 475
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=23.68 E-value=33 Score=21.70 Aligned_cols=13 Identities=8% Similarity=0.100 Sum_probs=10.7
Q ss_pred CcceEEEcccCCC
Q psy13141 51 HIHVLINNAGQGG 63 (84)
Q Consensus 51 ~id~lv~~ag~~~ 63 (84)
.+|++||.|+...
T Consensus 184 ~~D~ViHlAa~~~ 196 (436)
T PLN02166 184 EVDQIYHLACPAS 196 (436)
T ss_pred CCCEEEECceecc
Confidence 5899999998654
No 476
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=23.49 E-value=2.6e+02 Score=19.42 Aligned_cols=25 Identities=20% Similarity=0.224 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHhhcCCceeEEEEee
Q psy13141 7 GKANGVRESIITKTNNHQVVVKKLD 31 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~D 31 (84)
.+.+.+++.+++.+|+.++..+...
T Consensus 395 ~KA~aAa~~Lk~InP~v~i~~~~~~ 419 (664)
T TIGR01381 395 GKAETAQKALKRIFPSIQATGHRLT 419 (664)
T ss_pred cHHHHHHHHHHHHCCCcEEEEeeee
Confidence 4556677888888777777666554
No 477
>cd00494 HMBS Hydroxymethylbilane synthase (HMBS), also known as porphobilinogen deaminase (PBGD), is an intermediate enzyme in the biosynthetic pathway of tetrapyrrolic ring systems, such as heme, chlorophylls, and vitamin B12. HMBS catalyzes the conversion of porphobilinogen (PBG) into hydroxymethylbilane (HMB). HMBS consists of three domains, and is believed to bind substrate through a hinge-bending motion of domains I and II. HMBS is found in all organisms except viruses.
Probab=23.43 E-value=1.9e+02 Score=17.71 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=27.2
Q ss_pred HHHHHHHhhcCCceeEEE----EeecCCHHHH------HHHHHHHHhh--cCCcceEEEcccC
Q psy13141 11 GVRESIITKTNNHQVVVK----KLDLASLDSV------REFAAQILDE--EKHIHVLINNAGQ 61 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~----~~D~~~~~~~------~~~~~~~~~~--~~~id~lv~~ag~ 61 (84)
.+.+.+++.+|+..+..+ ..|......+ .-|.+++.+. .|.+|+.||+.=-
T Consensus 17 ~V~~~L~~~~p~~~~ei~~i~T~GD~~~~~~L~~iggkG~Ftkele~aLl~g~iDiAVHSlKD 79 (292)
T cd00494 17 KVIEKLKELCPGIEVEIVIIKTTGDKILDKPLAKIGGKGLFTKELEEALLNGEIDLAVHSLKD 79 (292)
T ss_pred HHHHHHHHhCCCCeEEEEEEEecCcccccccHHHcCCcceeHHHHHHHHHcCCCCEEEecccc
Confidence 345667776665444333 3453222112 1233455443 3789999999753
No 478
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=23.41 E-value=1.8e+02 Score=17.43 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=10.0
Q ss_pred HHHHHHHHHhhcCCcceEEEcc
Q psy13141 38 VREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 38 ~~~~~~~~~~~~~~id~lv~~a 59 (84)
+.+.+..+++.+ .+|.+|.|+
T Consensus 15 v~~~Lp~L~~~~-~~DfVIaNg 35 (253)
T PF13277_consen 15 VKEHLPELKEEY-GIDFVIANG 35 (253)
T ss_dssp HHHHHHHHGG---G-SEEEEE-
T ss_pred HHHHHHHHHhhc-CCCEEEECC
Confidence 445555555554 577777654
No 479
>TIGR00321 dhys deoxyhypusine synthase. This family of apparent orthologs has an unusual UPGMA difference tree, in which the members from the archaea M. jannaschii and P. horikoshii cluster with the known eukaryotic deoxyhypusine synthases. Separated by a fairly deep branch, although still strongly related, is a small cluster of proteins from Methanobacterium thermoautotrophicum and Archeoglobus fulgidus, the latter of which has two.
Probab=23.39 E-value=1.9e+02 Score=17.77 Aligned_cols=36 Identities=17% Similarity=0.227 Sum_probs=26.1
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
+..+...+.. ..++.++..+.++ +-+|++|..+|..
T Consensus 49 fLt~tg~mvs-aGlr~ii~~Li~~-g~Vd~ivtTganl 84 (301)
T TIGR00321 49 FMGYAGNLVP-SGMREIIAYLIQH-GMIDALVTTGANL 84 (301)
T ss_pred EEEeccccch-hhHHHHHHHHHHc-CCeeEEEeCCCch
Confidence 4445556654 6788888888765 6799999888753
No 480
>PRK06046 alanine dehydrogenase; Validated
Probab=23.36 E-value=1.9e+02 Score=17.66 Aligned_cols=18 Identities=17% Similarity=0.038 Sum_probs=11.3
Q ss_pred CccchhhHHHHHHHHHhh
Q psy13141 2 ACRDLGKANGVRESIITK 19 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~ 19 (84)
++|+.++.+++.+++.+.
T Consensus 160 ~~r~~~~~~~~~~~~~~~ 177 (326)
T PRK06046 160 YDRTKSSAEKFVERMSSV 177 (326)
T ss_pred ECCCHHHHHHHHHHHHhh
Confidence 466666667666666543
No 481
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=23.35 E-value=2.1e+02 Score=18.15 Aligned_cols=56 Identities=13% Similarity=0.021 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHhhcCCceeEEEE---eecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 7 GKANGVRESIITKTNNHQVVVKK---LDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~---~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
+++.++..++.+.+ ..++.++. ..-.--++++.+++.+++..+..-+.|++.|+.+
T Consensus 70 ~~L~~aI~~i~~~~-~P~~I~V~tTC~se~IGDDi~~v~~~~~~~~~~pVi~v~tpgf~g 128 (407)
T TIGR01279 70 EELDRVVEQIKRDR-NPSVIFLLSSCTPEVIKMDLEGLAERLSTNFGVPVLFAPASGLDY 128 (407)
T ss_pred HHHHHHHHHHHhhc-CCCEEEEECCchHHHHHhhHHHHHHHHHHhhCCCEEEeeCCCccc
Confidence 46677777777666 23333322 1222236778888887766555555667777654
No 482
>TIGR03253 oxalate_frc formyl-CoA transferase. This enzyme, formyl-CoA transferase, transfers coenzyme A from formyl-CoA to oxalate. It forms a pathway, together with oxalyl-CoA decarboxylase, for oxalate degradation; decarboxylation by the latter gene regenerates formyl-CoA. The two enzymes typically are encoded by a two-gene operon.
Probab=23.34 E-value=2.1e+02 Score=18.22 Aligned_cols=32 Identities=16% Similarity=0.186 Sum_probs=21.7
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEccc
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 60 (84)
=..+.+|+.+++..+.+.+-++ .-|++|.|-.
T Consensus 66 Krsi~lDLk~~~g~~~l~~Lv~----~ADVvien~r 97 (415)
T TIGR03253 66 KRSITLNTKTPEGKEVLEELIK----KADVMVENFG 97 (415)
T ss_pred CeEEEeeCCCHHHHHHHHHHHh----hCCEEEECCC
Confidence 3567789999988655544443 3588888763
No 483
>PRK14038 ADP-dependent glucokinase; Provisional
Probab=23.31 E-value=2.3e+02 Score=18.63 Aligned_cols=72 Identities=11% Similarity=-0.003 Sum_probs=38.6
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhh
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLG 76 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~ 76 (84)
+.|+..+..+.+.+....... ..+..|..+..++-+....+.+.+|---+.||+.++.-.....+.+++++.
T Consensus 289 GmNE~ELa~ll~~lg~~~l~~--~i~~~~~~~~~~v~e~~~~L~~~~gleri~vHT~~y~l~i~~~~~~~~~~a 360 (453)
T PRK14038 289 GLNEVELASIMEVMGEKTLAE--KLLAKDPVDPIAVTEAMLKLAEKTGVKRIHFHTYGYYLALTKYRGEHVRDA 360 (453)
T ss_pred ccCHHHHHHHHHHhccchhhh--hhhhcCccCHHHHHHHHHHHHHHcCCCEEEEEecceeEEEecCCHHHHHHH
Confidence 345555555554333221111 223356667888888888888877644467788875432112234555543
No 484
>PRK01066 porphobilinogen deaminase; Provisional
Probab=23.19 E-value=1.7e+02 Score=17.22 Aligned_cols=51 Identities=10% Similarity=0.010 Sum_probs=27.2
Q ss_pred HHHHHHHHhhcCCceeEEE----EeecCCHHHHHH------HHHHHHhh--cCCcceEEEccc
Q psy13141 10 NGVRESIITKTNNHQVVVK----KLDLASLDSVRE------FAAQILDE--EKHIHVLINNAG 60 (84)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~----~~D~~~~~~~~~------~~~~~~~~--~~~id~lv~~ag 60 (84)
+.+.+.+++.+|+..+..+ ..|......+.. |.+++.+. .|.+|+.||+.=
T Consensus 33 ~~v~~~L~~~~p~~~~ei~~i~T~GD~~~~~~L~~iGgkGlFtkele~aLl~g~iDiAVHSlK 95 (231)
T PRK01066 33 HECLRLLRSFFPKLWFQISTTTTQGDLDQKTPLHLVENTGFFTDDVDFLVLSGQCDLAIHSAK 95 (231)
T ss_pred HHHHHHHHHhCCCCcEEEEEEeccCcccccccHHHcCCceeeHHHHHHHHHcCCCCEEEecCC
Confidence 3355677776665444333 345332222222 23444443 378999999874
No 485
>TIGR00006 S-adenosyl-methyltransferase MraW. Genetics paper in 1972 links mra cluster to peptidoglycan biosynthesis in E. coli. Seems to be common in proteobacteria.wn.
Probab=23.13 E-value=1.9e+02 Score=17.73 Aligned_cols=54 Identities=17% Similarity=0.151 Sum_probs=31.9
Q ss_pred ccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCC
Q psy13141 3 CRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGG 63 (84)
Q Consensus 3 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~ 63 (84)
++++..++.+.+.+.. + +.++.++..++++.. ..+... ....+|+++.+-|+..
T Consensus 51 D~D~~Al~~ak~~L~~-~-~~R~~~i~~nF~~l~---~~l~~~--~~~~vDgIl~DLGvSS 104 (305)
T TIGR00006 51 DRDPQAIAFAKERLSD-F-EGRVVLIHDNFANFF---EHLDEL--LVTKIDGILVDLGVSS 104 (305)
T ss_pred cCCHHHHHHHHHHHhh-c-CCcEEEEeCCHHHHH---HHHHhc--CCCcccEEEEeccCCH
Confidence 4566666655555543 3 456777777665432 223221 2246999999998753
No 486
>PRK08617 acetolactate synthase; Reviewed
Probab=23.07 E-value=2.3e+02 Score=18.63 Aligned_cols=42 Identities=19% Similarity=0.132 Sum_probs=27.5
Q ss_pred CCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 21 NNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 21 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
|+..+..+..|-+=.-.+.++.-..+....-+-+++||.++.
T Consensus 431 p~~~vv~i~GDGsf~m~~~eL~Ta~~~~lpv~~vV~NN~~~~ 472 (552)
T PRK08617 431 PGKKVVSVSGDGGFLFSAMELETAVRLKLNIVHIIWNDGHYN 472 (552)
T ss_pred CCCcEEEEEechHHhhhHHHHHHHHHhCCCeEEEEEECCccc
Confidence 356788888898777777777665544444444566777653
No 487
>PRK12440 acetate kinase; Reviewed
Probab=22.96 E-value=1.7e+02 Score=18.82 Aligned_cols=15 Identities=20% Similarity=0.282 Sum_probs=12.7
Q ss_pred cCCcceEEEcccCCC
Q psy13141 49 EKHIHVLINNAGQGG 63 (84)
Q Consensus 49 ~~~id~lv~~ag~~~ 63 (84)
.+++|.+|..+|+..
T Consensus 318 l~gvDaiVFTgGIGe 332 (397)
T PRK12440 318 LDSLDGIIFTGGIGE 332 (397)
T ss_pred hCCCCEEEECCcccc
Confidence 468999999999865
No 488
>PRK07586 hypothetical protein; Validated
Probab=22.83 E-value=2.3e+02 Score=18.44 Aligned_cols=42 Identities=12% Similarity=0.151 Sum_probs=26.7
Q ss_pred CCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 21 NNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 21 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
|+..+..+..|-+=.-.+.++.-..+....-+-+++||.|+.
T Consensus 402 p~r~Vv~i~GDGsf~m~~~EL~Ta~~~~lpv~ivV~NN~~y~ 443 (514)
T PRK07586 402 PDRKVLALQGDGSAMYTIQALWTQARENLDVTTVIFANRAYA 443 (514)
T ss_pred CCCeEEEEEechHHHhHHHHHHHHHHcCCCCEEEEEeCchhH
Confidence 456788888897765666666555544444345566887763
No 489
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=22.76 E-value=1.4e+02 Score=15.89 Aligned_cols=49 Identities=8% Similarity=0.060 Sum_probs=28.9
Q ss_pred CccchhhHHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCC
Q psy13141 2 ACRDLGKANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQG 62 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~ 62 (84)
++|+....+.+...+... + ..+..++-... ++++ ....-|++|...|..
T Consensus 34 vGrs~~vG~pla~lL~~~--g--atV~~~~~~t~-~l~~-------~v~~ADIVvsAtg~~ 82 (140)
T cd05212 34 VGRSGIVGAPLQCLLQRD--G--ATVYSCDWKTI-QLQS-------KVHDADVVVVGSPKP 82 (140)
T ss_pred ECCCchHHHHHHHHHHHC--C--CEEEEeCCCCc-CHHH-------HHhhCCEEEEecCCC
Confidence 577777777777777755 3 33444443221 2222 234578888888765
No 490
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=22.74 E-value=1.3e+02 Score=15.47 Aligned_cols=62 Identities=13% Similarity=0.206 Sum_probs=32.0
Q ss_pred HHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 11 GVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
.+.+.++.. +..+.....--.+.+.+.+.+.... ...|++|-+-|......+.+.+-+.+.+
T Consensus 22 ~l~~~l~~~--G~~~~~~~~v~Dd~~~I~~~l~~~~---~~~dliittGG~g~g~~D~t~~~l~~~~ 83 (135)
T smart00852 22 ALAELLTEL--GIEVTRYVIVPDDKEAIKEALREAL---ERADLVITTGGTGPGPDDVTPEAVAEAL 83 (135)
T ss_pred HHHHHHHHC--CCeEEEEEEeCCCHHHHHHHHHHHH---hCCCEEEEcCCCCCCCCcCcHHHHHHHh
Confidence 344445544 4444333322244555555554443 3478888777655334456665555543
No 491
>PRK05398 formyl-coenzyme A transferase; Provisional
Probab=22.74 E-value=2.2e+02 Score=18.18 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=20.9
Q ss_pred eEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcc
Q psy13141 25 VVVKKLDLASLDSVREFAAQILDEEKHIHVLINNA 59 (84)
Q Consensus 25 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 59 (84)
=..+.+|+.+++....+.+-+. .-|++|.|-
T Consensus 67 Krsi~lDLk~~eGr~~l~~Lv~----~ADVvien~ 97 (416)
T PRK05398 67 KRSITLDTKTPEGKEVLEKLIR----EADVLVENF 97 (416)
T ss_pred CeEEEeeCCCHHHHHHHHHHHh----cCCEEEECC
Confidence 3567789999988655444442 468888774
No 492
>PRK06096 molybdenum transport protein ModD; Provisional
Probab=22.64 E-value=1.9e+02 Score=17.53 Aligned_cols=35 Identities=29% Similarity=0.186 Sum_probs=22.6
Q ss_pred eeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEccc
Q psy13141 24 QVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAG 60 (84)
Q Consensus 24 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag 60 (84)
.+..+.+|--+++++++++..+.+..+ .+.+-.+|
T Consensus 209 gaDiI~LDn~~~e~l~~av~~~~~~~~--~~~leaSG 243 (284)
T PRK06096 209 QPDVLQLDKFSPQQATEIAQIAPSLAP--HCTLSLAG 243 (284)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhccCC--CeEEEEEC
Confidence 356677888888888888877654322 23444444
No 493
>TIGR01774 PFL2-3 pyruvate formate-lyase. This model represents isoforms of the pyruvate-formate lyases found in a limited number of species including E. coli. This enzyme catalyzes the reaction pyruvate + CoA - acetyl-CoA + formate, which is a step in the fermentation of glucose.
Probab=22.56 E-value=2.3e+02 Score=20.03 Aligned_cols=66 Identities=11% Similarity=0.116 Sum_probs=39.4
Q ss_pred HHHHHHHHHhhcCCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccCCCCcccCChhhhhhhh
Q psy13141 9 ANGVRESIITKTNNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQGGILNRITKDGLQLGM 77 (84)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~ 77 (84)
.+++...++.-+.......++.++.+.+.+..+-+.-. .-.|.+|--+|+...|.+++.+.-++.+
T Consensus 714 ~~~l~~llr~yf~~~gg~hiq~NVvd~etL~dAqk~PE---~Y~~LiVRVaGYSa~Fv~L~~~~QdeII 779 (786)
T TIGR01774 714 KQKLIEALRKSFMELKVMHIQFNIVKEDTLRKAQQEPE---KYRWLVVRVAGYSAFFVELSRPVQDDII 779 (786)
T ss_pred HHHHHHHHHHHHhhcCCcccccccCCHHHHHHHHhChh---hcCCeEEEEcceEehHhhCCHHHHHHHH
Confidence 34455555543311234677888888877655443332 2367788888887767677665555544
No 494
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=22.47 E-value=1.2e+02 Score=15.04 Aligned_cols=21 Identities=29% Similarity=0.520 Sum_probs=13.7
Q ss_pred HHHHHHhhc--CCcceEEEcccC
Q psy13141 41 FAAQILDEE--KHIHVLINNAGQ 61 (84)
Q Consensus 41 ~~~~~~~~~--~~id~lv~~ag~ 61 (84)
+.+.+++.. ..+|+++.++|.
T Consensus 46 ~~~~i~~~~~~~~~d~vid~~g~ 68 (130)
T PF00107_consen 46 FVEQIRELTGGRGVDVVIDCVGS 68 (130)
T ss_dssp HHHHHHHHTTTSSEEEEEESSSS
T ss_pred cccccccccccccceEEEEecCc
Confidence 344444433 369999999984
No 495
>PRK00180 acetate kinase A/propionate kinase 2; Reviewed
Probab=22.09 E-value=1.9e+02 Score=18.60 Aligned_cols=13 Identities=23% Similarity=0.509 Sum_probs=12.0
Q ss_pred CCcceEEEcccCC
Q psy13141 50 KHIHVLINNAGQG 62 (84)
Q Consensus 50 ~~id~lv~~ag~~ 62 (84)
|.+|.+|...|+.
T Consensus 322 g~vDaiVfTGGIg 334 (402)
T PRK00180 322 GRLDAIVFTAGIG 334 (402)
T ss_pred CCCCEEEEcCccc
Confidence 7899999999987
No 496
>PRK06141 ornithine cyclodeaminase; Validated
Probab=21.93 E-value=1.9e+02 Score=17.54 Aligned_cols=16 Identities=25% Similarity=0.227 Sum_probs=8.5
Q ss_pred CccchhhHHHHHHHHH
Q psy13141 2 ACRDLGKANGVRESII 17 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~ 17 (84)
++|+.++.+++.+++.
T Consensus 156 ~~Rs~~~a~~~a~~~~ 171 (314)
T PRK06141 156 WGRDPAKAEALAAELR 171 (314)
T ss_pred EcCCHHHHHHHHHHHH
Confidence 3455555555555554
No 497
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=21.91 E-value=1.9e+02 Score=17.32 Aligned_cols=18 Identities=22% Similarity=0.211 Sum_probs=11.7
Q ss_pred CccchhhHHHHHHHHHhh
Q psy13141 2 ACRDLGKANGVRESIITK 19 (84)
Q Consensus 2 ~~r~~~~~~~~~~~~~~~ 19 (84)
+.|+.++.+++.+.+...
T Consensus 157 ~nR~~~ka~~La~~~~~~ 174 (283)
T PRK14027 157 ADLDTSRAQALADVINNA 174 (283)
T ss_pred EcCCHHHHHHHHHHHhhc
Confidence 467777777777666544
No 498
>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv. viciae IolD. IolD plays an important role in myo-inositol catabolism.
Probab=21.85 E-value=1.6e+02 Score=16.43 Aligned_cols=41 Identities=27% Similarity=0.192 Sum_probs=23.3
Q ss_pred CCceeEEEEeecCCHHHHHHHHHHHHhhcCCcceEEEcccC
Q psy13141 21 NNHQVVVKKLDLASLDSVREFAAQILDEEKHIHVLINNAGQ 61 (84)
Q Consensus 21 ~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~ 61 (84)
|+..+..+..|-+=.-...++.........-+-+++||.|+
T Consensus 65 p~~~vv~i~GDGsf~m~~~eL~Ta~~~~lpv~ivV~NN~~~ 105 (205)
T cd02003 65 PDREVYVLVGDGSYLMLHSEIVTAVQEGLKIIIVLFDNHGF 105 (205)
T ss_pred CCCeEEEEEccchhhccHHHHHHHHHcCCCCEEEEEECCcc
Confidence 35668888888765555555444333333334456677765
No 499
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=21.85 E-value=1.9e+02 Score=17.27 Aligned_cols=9 Identities=11% Similarity=-0.049 Sum_probs=3.5
Q ss_pred HHHHHHHHH
Q psy13141 9 ANGVRESII 17 (84)
Q Consensus 9 ~~~~~~~~~ 17 (84)
+....+.+.
T Consensus 28 l~~li~~l~ 36 (296)
T TIGR03249 28 YRENIEWLL 36 (296)
T ss_pred HHHHHHHHH
Confidence 333344333
No 500
>cd03074 PDI_b'_Calsequestrin_C Protein Disulfide Isomerase (PDIb') family, Calsequestrin subfamily, C-terminal TRX-fold domain; Calsequestrin is the major calcium storage protein in the sarcoplasmic reticulum (SR) of skeletal and cardiac muscle. It stores calcium ions in sufficient quantities (up to 20 mM) to allow repetitive contractions and is essential to maintain movement, respiration and heart beat. A missense mutation in human cardiac calsequestrin is associated with catecholamine-induced polymorphic ventricular tachycardia (CPVT), a rare disease characterized by seizures or sudden death in response to physiologic or emotional stress. Calsequestrin is a highly acidic protein with up to 50 calcium binding sites formed simply by the clustering of two or more acidic residues. The monomer contains three redox inactive TRX-fold domains. Calsequestrin is condensed as a linear polymer in the SR lumen and is membrane-anchored through binding with intra-membrane proteins triadin, junctin
Probab=21.80 E-value=44 Score=17.24 Aligned_cols=51 Identities=8% Similarity=0.024 Sum_probs=26.8
Q ss_pred EeecCCHHH--HHHHHHHHHhhc---CCcceEEEcccCCC-CcccCChhhhhhhhccceecC
Q psy13141 29 KLDLASLDS--VREFAAQILDEE---KHIHVLINNAGQGG-ILNRITKDGLQLGMQIDQSEV 84 (84)
Q Consensus 29 ~~D~~~~~~--~~~~~~~~~~~~---~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~n~~~~ 84 (84)
-++-.+++. +-++++++.+.. +.+.++- +-. .|+ .-..-|+++|.|++.+|
T Consensus 27 Faee~dpdG~eFl~ilk~vA~~nt~np~LsiIW----IDPD~FP-llv~yWektF~IDl~~P 83 (120)
T cd03074 27 FAEEEDPDGYEFLEILKEVARDNTDNPDLSIIW----IDPDDFP-LLVPYWEKTFGIDLFRP 83 (120)
T ss_pred EeccCCccHHHHHHHHHHHHHhcCcCCCceEEE----ECCccCc-hhhHHHHhhcCcccCCC
Confidence 345555544 455666666543 3344421 101 122 22467899999998764
Done!