Query psy13144
Match_columns 1031
No_of_seqs 386 out of 2779
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 20:41:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13144.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13144hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fbr_A Lectin, myxobacterial h 99.8 6.8E-23 2.3E-27 215.9 -15.8 219 600-954 38-265 (267)
2 1z1y_A Ookinete surface protei 99.8 1.7E-20 5.7E-25 193.0 0.3 151 42-269 8-171 (186)
3 4fbr_A Lectin, myxobacterial h 99.8 2.1E-22 7E-27 212.3 -17.4 251 163-548 5-265 (267)
4 2vj3_A Neurogenic locus notch 99.8 1.1E-18 3.8E-23 169.3 10.1 114 37-187 3-118 (135)
5 1z1y_A Ookinete surface protei 99.8 5.5E-20 1.9E-24 189.1 -0.4 143 4-187 15-174 (186)
6 2vj3_A Neurogenic locus notch 99.7 2.2E-18 7.4E-23 167.3 10.1 119 85-280 2-120 (135)
7 4d90_A EGF-like repeat and dis 99.7 3.6E-17 1.2E-21 160.6 9.0 116 40-187 1-132 (143)
8 2ygq_A WIF-1, WNT inhibitory f 99.7 2.4E-17 8.3E-22 183.2 7.4 167 782-1028 154-321 (324)
9 4d90_A EGF-like repeat and dis 99.7 1.2E-16 4.1E-21 156.9 11.4 119 874-1014 5-132 (143)
10 2ygq_A WIF-1, WNT inhibitory f 99.7 5.3E-17 1.8E-21 180.5 9.6 200 44-329 106-307 (324)
11 2vj2_A Jagged-1; signalling, p 99.6 5.7E-17 1.9E-21 163.4 4.8 149 792-1014 17-168 (169)
12 2bou_A EGF-like module contain 99.6 8.2E-16 2.8E-20 150.8 7.0 117 873-1019 5-139 (143)
13 2vj2_A Jagged-1; signalling, p 99.6 3.6E-16 1.2E-20 157.6 4.4 150 430-707 14-168 (169)
14 1yo8_A Thrombospondin-2; EGF, 99.6 4.5E-15 1.5E-19 176.1 10.9 132 38-187 2-145 (634)
15 1uzk_A Fibrillin-1; glycoprote 99.5 3E-16 1E-20 157.4 -1.6 139 38-269 2-155 (162)
16 1yo8_A Thrombospondin-2; EGF, 99.5 1E-14 3.5E-19 173.0 11.2 122 593-766 2-146 (634)
17 2bou_A EGF-like module contain 99.5 5E-15 1.7E-19 145.2 6.1 133 520-716 5-142 (143)
18 3fcs_B Integrin beta-3; beta p 99.5 4.4E-14 1.5E-18 170.3 11.9 121 783-954 495-624 (690)
19 3fcs_B Integrin beta-3; beta p 99.5 8.5E-14 2.9E-18 167.8 13.2 177 596-844 436-624 (690)
20 1uzk_A Fibrillin-1; glycoprote 99.5 2.9E-15 1E-19 150.1 -0.8 145 808-1013 2-157 (162)
21 1dx5_I Thrombomodulin; serine 99.5 3.9E-15 1.3E-19 140.4 0.1 108 37-182 2-111 (118)
22 2w86_A Fibrillin-1, fibrillin1 99.4 1.6E-14 5.6E-19 142.1 -4.3 123 37-182 2-140 (147)
23 1dx5_I Thrombomodulin; serine 99.3 1.8E-13 6.2E-18 129.0 1.7 104 148-269 2-111 (118)
24 2w86_A Fibrillin-1, fibrillin1 99.2 2.9E-13 9.8E-18 133.2 -2.6 111 148-269 2-140 (147)
25 2gy5_A Angiopoietin-1 receptor 99.2 1.5E-11 5.3E-16 141.3 9.9 136 690-907 184-319 (423)
26 3k6s_B Integrin beta-2; cell r 99.2 1.8E-11 6.1E-16 147.2 7.8 175 733-963 435-626 (687)
27 3k6s_B Integrin beta-2; cell r 99.2 2.4E-11 8.2E-16 146.0 7.7 134 782-960 436-592 (687)
28 2gy5_A Angiopoietin-1 receptor 99.2 3.3E-11 1.1E-15 138.5 8.1 117 103-280 204-321 (423)
29 1emn_A Fibrillin; extracellula 99.1 3.1E-11 1.1E-15 105.6 6.1 75 920-1013 3-78 (82)
30 1emn_A Fibrillin; extracellula 99.1 3.5E-11 1.2E-15 105.3 5.4 74 37-129 3-77 (82)
31 1tpg_A T-plasminogen activator 99.1 3E-11 1E-15 107.9 4.8 83 832-959 1-85 (91)
32 1tpg_A T-plasminogen activator 99.1 3.8E-11 1.3E-15 107.2 5.4 84 536-708 1-86 (91)
33 1lmj_A Fibrillin 1; EGF, calci 99.1 4.7E-11 1.6E-15 105.6 4.9 77 38-129 2-80 (86)
34 1lmj_A Fibrillin 1; EGF, calci 99.1 5.6E-11 1.9E-15 105.1 4.4 77 921-1012 2-80 (86)
35 1aut_L Activated protein C; se 99.1 9E-11 3.1E-15 109.8 5.5 97 37-167 4-109 (114)
36 1z6c_A Vitamin K-dependent pro 99.0 2E-10 6.8E-15 101.8 3.9 71 38-128 2-74 (87)
37 4aqs_A Laminin subunit beta-1; 99.0 2.7E-10 9.4E-15 135.8 5.8 69 421-491 450-521 (525)
38 4aqs_A Laminin subunit beta-1; 99.0 4.7E-10 1.6E-14 133.8 7.4 110 684-844 411-521 (525)
39 1x7a_L Coagulation factor IX, 98.9 4.2E-10 1.4E-14 109.9 5.2 75 920-1014 46-125 (146)
40 1aut_L Activated protein C; se 98.9 5.8E-10 2E-14 104.2 5.8 81 592-712 4-94 (114)
41 1x7a_L Coagulation factor IX, 98.9 5.6E-10 1.9E-14 109.0 4.5 71 37-127 46-117 (146)
42 1nfu_B Coagulation factor XA, 98.9 4.2E-10 1.4E-14 114.4 3.0 72 37-126 40-111 (195)
43 1z6c_A Vitamin K-dependent pro 98.9 9.4E-10 3.2E-14 97.4 4.6 71 593-702 2-74 (87)
44 2c4f_L Coagulation factor VII 98.8 2.7E-09 9.3E-14 103.8 5.6 74 37-126 45-119 (142)
45 2vh0_B Activated factor XA lig 98.8 1.2E-09 4.1E-14 105.2 2.7 72 37-126 40-111 (134)
46 2c4f_L Coagulation factor VII 98.8 3.1E-09 1.1E-13 103.4 5.2 73 592-702 45-121 (142)
47 2w2n_E LDL receptor, low-densi 98.8 9.6E-10 3.3E-14 101.2 1.0 83 16-129 17-101 (107)
48 1nfu_B Coagulation factor XA, 98.7 1.4E-09 4.8E-14 110.5 1.2 76 920-1014 40-120 (195)
49 2vh0_B Activated factor XA lig 98.7 1.7E-09 5.7E-14 104.2 1.2 76 920-1014 40-120 (134)
50 2w2n_E LDL receptor, low-densi 98.7 4.4E-09 1.5E-13 96.7 3.0 71 88-182 29-100 (107)
51 3h5c_B Vitamin K-dependent pro 98.7 2.4E-08 8.3E-13 111.2 7.5 84 592-717 3-89 (317)
52 1n7d_A LDL receptor, low-densi 98.6 2.9E-07 9.8E-12 113.6 17.4 165 795-1019 200-374 (699)
53 1klo_A Laminin; glycoprotein; 98.6 2.1E-08 7.2E-13 99.6 4.8 125 46-269 2-142 (162)
54 3h5c_B Vitamin K-dependent pro 98.6 5.2E-08 1.8E-12 108.5 7.4 78 874-970 10-90 (317)
55 1klo_A Laminin; glycoprotein; 98.6 7.8E-08 2.7E-12 95.5 7.3 74 734-844 2-87 (162)
56 3m0c_C LDL receptor, low-densi 98.5 1.2E-07 4.1E-12 117.7 8.9 137 795-969 257-396 (791)
57 3m0c_C LDL receptor, low-densi 98.5 8.5E-08 2.9E-12 119.1 6.9 110 876-1019 280-392 (791)
58 1n7d_A LDL receptor, low-densi 98.5 6.9E-07 2.3E-11 110.3 15.0 98 103-223 262-366 (699)
59 2p28_B Integrin beta-2; hybrid 98.3 4.5E-07 1.5E-11 93.9 4.5 107 364-501 97-214 (217)
60 1edm_B Factor IX; epidermal gr 98.3 8.1E-07 2.8E-11 65.3 4.5 34 38-71 2-35 (39)
61 2p28_B Integrin beta-2; hybrid 98.3 6.3E-07 2.1E-11 92.8 5.3 96 783-907 98-213 (217)
62 1edm_B Factor IX; epidermal gr 98.2 1E-06 3.5E-11 64.8 3.8 37 149-187 2-38 (39)
63 3p5b_L Low density lipoprotein 98.2 8.2E-07 2.8E-11 102.2 4.2 72 40-129 1-72 (400)
64 3u7u_G Neuregulin 1; signaling 98.2 8.3E-07 2.8E-11 70.1 2.8 38 920-959 6-48 (55)
65 3p5b_L Low density lipoprotein 98.1 1.7E-06 6E-11 99.4 6.3 79 923-1019 1-80 (400)
66 3u7u_G Neuregulin 1; signaling 98.1 1.2E-06 4E-11 69.2 2.7 38 148-187 6-48 (55)
67 3v65_B Low-density lipoprotein 98.1 6.5E-07 2.2E-11 102.5 1.1 74 38-128 2-75 (386)
68 3v65_B Low-density lipoprotein 97.9 1.7E-06 5.8E-11 99.0 1.5 72 921-1009 2-73 (386)
69 2k2s_B Micronemal protein 6; m 97.9 1E-06 3.5E-11 71.2 -0.9 35 37-71 9-46 (61)
70 1egf_A Epidermal growth factor 97.8 1.5E-05 5.1E-10 62.8 4.1 39 38-82 2-45 (53)
71 2k2s_B Micronemal protein 6; m 97.8 3E-06 1E-10 68.5 -0.2 38 920-959 9-49 (61)
72 1egf_A Epidermal growth factor 97.8 1.5E-05 5.2E-10 62.8 3.6 37 921-959 2-43 (53)
73 1a3p_A Epidermal growth factor 97.6 3.4E-05 1.2E-09 58.5 3.6 34 924-959 2-40 (45)
74 1a3p_A Epidermal growth factor 97.6 5E-05 1.7E-09 57.6 3.7 35 41-81 2-41 (45)
75 1k36_A Epiregulin; EGF-like fo 97.5 4E-05 1.4E-09 58.3 2.8 33 38-71 2-39 (46)
76 1hae_A Heregulin-alpha; growth 97.4 3.6E-05 1.2E-09 63.1 1.4 44 922-970 6-54 (63)
77 1k36_A Epiregulin; EGF-like fo 97.4 6.7E-05 2.3E-09 57.0 2.4 38 236-280 2-44 (46)
78 2wg3_C Hedgehog-interacting pr 97.3 2.6E-05 8.9E-10 90.8 -0.7 77 891-1014 378-454 (463)
79 2wg3_C Hedgehog-interacting pr 97.3 3.7E-05 1.3E-09 89.5 -0.2 77 834-959 378-454 (463)
80 1hae_A Heregulin-alpha; growth 97.2 6.6E-05 2.3E-09 61.5 1.1 38 39-82 6-48 (63)
81 3zyj_B Netrin-G1; cell adhesio 97.2 0.00013 4.6E-09 82.1 3.1 29 157-187 298-327 (426)
82 3ca7_A Protein spitz; argos, E 97.2 4.4E-05 1.5E-09 59.8 -0.9 30 929-960 15-48 (52)
83 3ca7_A Protein spitz; argos, E 97.0 9.3E-05 3.2E-09 58.0 -0.3 29 986-1014 15-47 (52)
84 1apq_A Complement protease C1R 96.9 0.00046 1.6E-08 54.2 3.2 33 37-71 2-44 (53)
85 2kl7_A Fibulin-4; secreted, ca 96.8 0.00053 1.8E-08 57.4 2.8 35 921-955 2-39 (71)
86 3zyj_B Netrin-G1; cell adhesio 96.8 0.00065 2.2E-08 76.5 4.2 96 420-551 299-397 (426)
87 1apq_A Complement protease C1R 96.8 0.00076 2.6E-08 52.9 3.3 34 920-955 2-45 (53)
88 2kl7_A Fibulin-4; secreted, ca 96.8 0.00059 2E-08 57.1 2.6 34 149-182 2-38 (71)
89 1ob1_C Major merozoite surface 96.7 0.00093 3.2E-08 58.5 3.4 71 924-1010 6-84 (99)
90 2jkh_L Factor X light chain; p 96.5 0.00098 3.4E-08 52.7 2.4 45 923-971 2-48 (55)
91 1gl4_A Nidogen-1, entactin; im 96.5 0.0005 1.7E-08 73.0 0.5 44 920-967 3-48 (285)
92 1n1i_A Merozoite surface prote 96.5 0.0036 1.2E-07 55.1 5.7 71 923-1009 11-84 (105)
93 1nql_B Epidermal growth factor 96.5 0.0007 2.4E-08 53.0 1.1 31 927-959 11-43 (53)
94 1nql_B Epidermal growth factor 96.5 0.00094 3.2E-08 52.3 1.8 32 44-81 11-44 (53)
95 2jkh_L Factor X light chain; p 96.5 0.00082 2.8E-08 53.2 1.5 30 40-71 2-33 (55)
96 1kli_L Factor VIIA; extrinsic 96.4 0.001 3.5E-08 55.2 1.5 33 37-71 3-38 (69)
97 1ob1_C Major merozoite surface 96.2 0.0026 8.9E-08 55.7 3.5 71 673-757 7-83 (99)
98 1kli_L Factor VIIA; extrinsic 96.2 0.0021 7.1E-08 53.4 2.7 48 920-971 3-53 (69)
99 1gl4_A Nidogen-1, entactin; im 95.9 0.0013 4.5E-08 69.8 0.2 41 87-134 4-44 (285)
100 1g1s_A P-selectin; selectin, l 95.6 0.0034 1.2E-07 61.9 1.7 41 39-85 119-159 (162)
101 1g1s_A P-selectin; selectin, l 95.6 0.003 1E-07 62.3 1.2 36 150-187 119-154 (162)
102 2fd6_A Urokinase-type plasmino 95.6 0.011 3.7E-07 55.2 4.8 57 929-1014 2-62 (122)
103 1n1i_A Merozoite surface prote 95.5 0.012 4.1E-07 51.8 4.5 69 673-757 13-84 (105)
104 1kig_L Factor XA; glycoprotein 95.1 0.0058 2E-07 47.4 1.2 25 45-71 6-30 (51)
105 1kig_L Factor XA; glycoprotein 95.1 0.0093 3.2E-07 46.2 2.3 38 929-970 7-44 (51)
106 2fd6_A Urokinase-type plasmino 94.8 0.021 7.1E-07 53.3 4.2 56 46-129 2-60 (122)
107 3ltf_D Protein spitz; receptor 94.5 0.0091 3.1E-07 47.6 0.9 30 929-960 15-48 (58)
108 3ltf_D Protein spitz; receptor 94.2 0.015 5.2E-07 46.3 1.6 30 46-81 15-48 (58)
109 2bz6_L Blood coagulation facto 94.1 0.021 7.1E-07 44.6 2.0 36 934-971 11-47 (53)
110 2bz6_L Blood coagulation facto 93.9 0.014 4.8E-07 45.6 0.8 21 51-71 11-32 (53)
111 1q4g_A Prostaglandin G/H synth 93.6 0.025 8.7E-07 66.7 2.6 37 39-81 2-40 (553)
112 3nt1_A Prostaglandin-endoperox 93.5 0.031 1.1E-06 66.0 3.1 33 39-71 1-35 (587)
113 1q4g_A Prostaglandin G/H synth 93.2 0.028 9.7E-07 66.3 2.2 36 150-187 2-39 (553)
114 3nt1_A Prostaglandin-endoperox 93.2 0.037 1.3E-06 65.4 3.1 37 922-960 1-39 (587)
115 3cfw_A L-selectin; EGF, cell a 92.5 0.059 2E-06 52.9 3.1 40 40-85 120-159 (164)
116 1szb_A Mannose binding lectin- 91.7 0.041 1.4E-06 54.5 0.8 33 920-954 122-159 (170)
117 2y38_A Laminin subunit alpha-5 91.6 0.31 1.1E-05 54.6 7.8 92 104-223 268-382 (403)
118 4aqt_A Laminin subunit gamma-1 91.6 0.17 5.8E-06 56.5 5.6 92 104-223 257-359 (375)
119 2wph_E Coagulation factor IXA 91.3 0.079 2.7E-06 42.3 1.9 21 51-71 11-32 (59)
120 3cfw_A L-selectin; EGF, cell a 90.9 0.1 3.5E-06 51.2 2.7 42 238-285 120-161 (164)
121 1oig_A Dumpy, CG33196-PB; stru 90.8 0.11 3.9E-06 33.3 1.9 24 632-655 2-25 (26)
122 4aqt_A Laminin subunit gamma-1 90.7 0.29 9.9E-06 54.6 6.5 29 157-187 256-286 (375)
123 1g1t_A E-selectin; EGF, adhesi 90.0 0.08 2.7E-06 51.4 1.0 37 39-81 119-155 (157)
124 2wph_E Coagulation factor IXA 88.8 0.27 9.4E-06 39.1 3.1 31 934-966 11-42 (59)
125 2y38_A Laminin subunit alpha-5 88.6 0.78 2.7E-05 51.4 7.8 66 537-626 286-369 (403)
126 2rnl_A Amphiregulin; AR, color 88.4 0.34 1.1E-05 37.1 3.2 29 985-1014 18-48 (50)
127 1szb_A Mannose binding lectin- 88.3 0.16 5.3E-06 50.2 1.8 33 37-71 122-159 (170)
128 3e50_C Protransforming growth 88.0 0.32 1.1E-05 37.2 2.9 30 927-959 13-44 (50)
129 1xdt_R Hbegf, heparin-binding 87.6 0.23 7.9E-06 41.7 2.1 35 150-187 37-76 (79)
130 1xdt_R Hbegf, heparin-binding 87.1 0.27 9.2E-06 41.3 2.2 32 39-71 37-73 (79)
131 1iox_A Betacellulin; EGF-like 87.1 0.3 1E-05 37.4 2.3 29 985-1014 14-44 (50)
132 2i9a_A Urokinase-type plasmino 87.0 0.57 2E-05 44.8 4.8 31 46-82 14-47 (145)
133 3e50_C Protransforming growth 87.0 0.45 1.5E-05 36.4 3.2 29 985-1014 14-44 (50)
134 1g1t_A E-selectin; EGF, adhesi 86.9 0.14 4.7E-06 49.7 0.3 36 150-187 119-154 (157)
135 1iox_A Betacellulin; EGF-like 86.3 0.35 1.2E-05 37.0 2.3 30 155-187 13-44 (50)
136 2rnl_A Amphiregulin; AR, color 84.4 0.83 2.9E-05 34.9 3.6 32 39-71 9-45 (50)
137 1oig_A Dumpy, CG33196-PB; stru 84.2 0.6 2.1E-05 30.1 2.2 24 392-415 2-25 (26)
138 2p26_A Integrin beta-2; hybrid 83.6 0.58 2E-05 49.9 3.3 56 783-844 198-265 (280)
139 2ygo_A WIF-1, WNT inhibitory f 82.1 0.78 2.7E-05 45.3 3.2 29 983-1014 151-179 (188)
140 3asi_A Neurexin-1-alpha; beta- 81.0 0.86 2.9E-05 51.8 3.7 34 38-71 184-218 (410)
141 2i9a_A Urokinase-type plasmino 80.8 1.3 4.5E-05 42.3 4.3 27 103-129 14-43 (145)
142 2ygo_A WIF-1, WNT inhibitory f 80.0 0.87 3E-05 44.9 2.8 30 873-908 151-180 (188)
143 3asi_A Neurexin-1-alpha; beta- 79.7 1.2 3.9E-05 50.7 4.2 37 149-187 184-221 (410)
144 1nzi_A Complement C1S componen 74.6 1.4 4.8E-05 42.6 2.6 33 37-71 115-150 (159)
145 1b9w_A Protein (merozoite surf 74.4 2.8 9.4E-05 36.0 3.9 71 240-324 7-79 (95)
146 3f1s_B Vitamin K-dependent pro 73.2 1.2 4.1E-05 47.7 1.9 31 39-71 2-35 (283)
147 1b9w_A Protein (merozoite surf 72.2 3.5 0.00012 35.4 4.0 72 924-1009 6-79 (95)
148 1nzi_A Complement C1S componen 71.2 1.9 6.4E-05 41.7 2.6 33 148-182 115-150 (159)
149 2e26_A Reelin, reeler protein; 68.5 1.3 4.5E-05 52.8 0.8 44 751-808 521-566 (725)
150 3f1s_B Vitamin K-dependent pro 66.9 3.2 0.00011 44.3 3.5 45 922-970 2-49 (283)
151 3v64_C Agrin; beta propeller, 63.9 1.9 6.5E-05 47.7 1.0 31 39-71 1-32 (349)
152 3qcw_A Neurexin-1-alpha; synap 63.6 3.9 0.00013 53.4 4.0 34 38-71 1016-1050(1245)
153 3qcw_A Neurexin-1-alpha; synap 62.2 4.1 0.00014 53.2 3.9 36 150-187 1017-1053(1245)
154 2p26_A Integrin beta-2; hybrid 59.4 4.8 0.00016 42.8 3.1 62 735-803 198-265 (280)
155 2e26_A Reelin, reeler protein; 55.1 3.1 0.00011 49.6 0.8 25 364-388 540-564 (725)
156 3v64_C Agrin; beta propeller, 54.8 4.8 0.00016 44.4 2.2 32 922-955 1-33 (349)
157 3fl7_A Ephrin receptor; ATP-bi 52.8 3.8 0.00013 48.1 1.0 70 158-269 252-321 (536)
158 3fby_A COMP, cartilage oligome 47.3 9.3 0.00032 43.9 3.0 38 922-959 18-59 (551)
159 3fby_A COMP, cartilage oligome 40.3 15 0.00051 42.3 3.3 39 810-849 19-59 (551)
160 3sov_A LRP-6, low-density lipo 37.8 19 0.00066 38.8 3.7 31 39-71 267-301 (318)
161 1ijq_A LDL receptor, low-densi 32.5 25 0.00084 37.8 3.4 32 38-71 266-308 (316)
162 4a0p_A LRP6, LRP-6, low-densit 25.7 27 0.00094 41.7 2.4 32 38-71 264-298 (628)
163 2ddu_A Reelin; beta-jelly-roll 21.1 22 0.00075 39.2 0.3 26 871-900 192-217 (387)
No 1
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.79 E-value=6.8e-23 Score=215.92 Aligned_cols=219 Identities=10% Similarity=-0.056 Sum_probs=154.5
Q ss_pred CCCCCCCeeeecCCceeeeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCCCCcCCc------C
Q psy13144 600 SPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNP------C 673 (1031)
Q Consensus 600 ~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~~~dide------C 673 (1031)
.+|.++++|++..++|+|+|++||+|. +|+ ++|++ |
T Consensus 38 ~~c~ngG~C~~g~~~y~C~Cp~Gf~G~------~Ce--------------------------------~ni~ec~~~~~c 79 (267)
T 4fbr_A 38 IKSDDGGKTLKGTMTYNGEGPIGFRGT------LSS--------------------------------ANNYTVENQWGG 79 (267)
T ss_dssp EECSSTTSEEEEEEEETTSCCEEEEEE------ECS--------------------------------TTEEEEEEESSS
T ss_pred CCcCCCCeecCCCCCeEEeCCCCcccc------ccc--------------------------------ccccccccccCc
Confidence 378899999999999999999999999 566 34666 6
Q ss_pred CCCCCCCCCceeecCCCCeeecCCCCcCCCCCCCcCcccCCCCCCccccccCcCCCCCCCCCCCCCeeeccCCCceeeCC
Q psy13144 674 IPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCP 753 (1031)
Q Consensus 674 ~~~~C~~~g~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~ 753 (1031)
.+.||.++++| |.|. +|+. +++|.+. +|.++|+|++...+|+|+|+
T Consensus 80 ~s~pC~nggtc--------------~~G~--~c~~----~~eC~s~--------------pC~ngG~C~~~~~sy~C~C~ 125 (267)
T 4fbr_A 80 TSAPWQPGGVW--------------VLGA--RDKQ----NIVAVSI--------------KSNDGGKTLTGTTTYNGEGP 125 (267)
T ss_dssp TTSCEEEEEEE--------------ECCC--CSSC----CEEEEEE--------------ECSSTTSEEEEEEEETTSCC
T ss_pred CCCcccCCCee--------------eccC--cccc----ccccCCC--------------CCCCCCEEecCCccEEeeCC
Confidence 66777776655 3444 5542 4455543 57888999999999999999
Q ss_pred CCcccCCCCCCCCCCCCCCCCCcc---CCCCCCCCCCeeeCceeecCCCCccCCcccCCCCCcCCCCCCCCCccccCCCC
Q psy13144 754 DGFIGDPFTSCSPKPPEPVQPVIQ---EDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFN 830 (1031)
Q Consensus 754 ~G~~g~~~~~C~~~~~~~~~~~~~---~~~c~C~~~~~C~~~~C~C~~G~~G~~c~~~~~~C~~~~~C~~~g~C~~~~~~ 830 (1031)
.||+|. .|+....+ +.. ....+|++.++| |.|.+++..++.+ ..+|.++|+|++..
T Consensus 126 ~Gf~G~---~Ce~~~d~----C~n~~~c~s~pC~ngg~c----------~~G~~c~~~i~c~--~~~c~ngg~C~dg~-- 184 (267)
T 4fbr_A 126 IGFKSE---VTDGDTYS----VENQWGGSAAPWHSGGVW----------VLGTRGKQNVINV--DAKSNDGGKTLSGT-- 184 (267)
T ss_dssp EEEEEE---ECCCCEEE----EEEECSSTTSCCEEEEEE----------ECCSSTTSCEEEE--EEECSSTTSEEEEE--
T ss_pred CCcccc---CCCCCccc----ccccCCcCCccccCCcce----------ecccccccccccC--CCCCCCCCEeeCCC--
Confidence 999998 57643211 000 011134443333 4577776655433 26899999999976
Q ss_pred CceeeecCCCCcCCCCCCCCCcccCCCCCCcccccCCcccCCCCCCCCCCCceeecCCCeeeEeCCCCccCCCccccCCC
Q psy13144 831 KQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIP 910 (1031)
Q Consensus 831 ~~~~C~C~~G~~g~g~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~ 910 (1031)
++|+|.|++||+|. .|+.+++ +|.+. .....+.|.+. +.+.+.|..||.+. .|+
T Consensus 185 ~~y~C~Cp~Gf~G~------~c~~~i~-----ec~~~--------~~c~~~~c~~g-G~~~~~C~~g~n~~---~c~--- 238 (267)
T 4fbr_A 185 MTYNGEGPIGFRGT------LTSPDTY-----TVENQ--------WGGSTAPWNPG-GFWMIGARNGQNVV---ALN--- 238 (267)
T ss_dssp EEETTSCCEEEEEE------EEETTEE-----EEEEE--------CSCTTSCCEEE-EEEECCCCTTCCEE---EEE---
T ss_pred CCeEEeCCCCcccc------ccccccc-----eeccC--------CCccCCcccCC-CeEEEecCCCCccc---cCC---
Confidence 89999999999999 7877654 33221 11223444443 44677788888766 342
Q ss_pred CCCCCCCCCCcCCCCCCCCCCCCCceeecCCCceeeCCCCCcCC
Q psy13144 911 PPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGA 954 (1031)
Q Consensus 911 ~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~ 954 (1031)
.||.++++|++..++|+|+||+||+|.
T Consensus 239 -----------------~~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 239 -----------------VASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp -----------------EECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred -----------------cCCCCCCEeeCCCcceeecCCCCcccc
Confidence 378999999999999999999999985
No 2
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.78 E-value=1.7e-20 Score=193.04 Aligned_cols=151 Identities=21% Similarity=0.499 Sum_probs=119.3
Q ss_pred CCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecC-----CC
Q psy13144 42 CQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVIN-----HS 116 (1031)
Q Consensus 42 C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~-----g~ 116 (1031)
..++||.+ |+|++..++|+|+|++||+|... ..|+ ++++|....= +++|.++++|+++. ++
T Consensus 8 ~~~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~---~~C~------~id~C~~~~~----~~~C~~~~~C~~~~~~~~~g~ 73 (186)
T 1z1y_A 8 TVDTICXN-GQLVQMSNHFXCMCNEGLVHLSE---NTCE------EXNECXXETL----GXACGEFGQCIENPDPAQVNM 73 (186)
T ss_dssp CTTCCCBT-EEEEECSSCEEEEECTTEEEEET---TEEE------ECCCCSGGGT----TSEEETTEEEEECSSTTSSCS
T ss_pred CCCCCCCC-CEeECCCCCeEeECCCCCccCCC---CccC------CCCcccCCCC----CCCCCCCCEeecCCCCcCCCC
Confidence 35789985 59999999999999999998510 1344 3456652100 15688889999999 89
Q ss_pred ceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcee----cCCCCceeeCCCCCcCC---CCCCccc
Q psy13144 117 PICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCR----DINGSPSCSCLPSYIGS---PPNCRPE 189 (1031)
Q Consensus 117 ~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~g~C~----~~~g~~~C~C~~Gy~g~---~~~C~~~ 189 (1031)
|+|+|++||+|.... |+ +++|+..||.++++|+ ++.++|+|+|++||+|. +..
T Consensus 74 y~C~C~~G~~g~~~~-C~---------------~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~---- 133 (186)
T 1z1y_A 74 YXCGCIEGYTLXEDT-CV---------------LDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXX---- 133 (186)
T ss_dssp EEEEECTTEEEETTE-EE---------------EGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTE----
T ss_pred EECCCCCCCccCCCC-CC---------------CCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCc----
Confidence 999999999998743 53 7899999999999999 88899999999999994 112
Q ss_pred CCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCC-CCCCcccccCCCeeeecCCCCcC
Q psy13144 190 CIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPC-GPNSQCREVNHQAVCSCLPNYFG 268 (1031)
Q Consensus 190 C~~~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C-~~~g~C~~~~g~y~C~C~~Gy~g 268 (1031)
|++ +++++|. .+| .++++|+++.++|+|.|++||+|
T Consensus 134 -------------------------------------C~~-----~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~~G~~g 170 (186)
T 1z1y_A 134 -------------------------------------CTX-----TGETACQ-LXCNTDNEVCXNVEGVYXCQCMEGFTF 170 (186)
T ss_dssp -------------------------------------EEE-----EECCCCC-CCCCTTTEEEEEETTEEEEEECTTCEE
T ss_pred -------------------------------------ceE-----cCCCccc-ccccccCcceecCCCCeeeECCCCCcc
Confidence 322 1246776 489 88999999999999999999999
Q ss_pred C
Q psy13144 269 S 269 (1031)
Q Consensus 269 ~ 269 (1031)
+
T Consensus 171 ~ 171 (186)
T 1z1y_A 171 D 171 (186)
T ss_dssp E
T ss_pred C
Confidence 8
No 3
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.76 E-value=2.1e-22 Score=212.28 Aligned_cols=251 Identities=10% Similarity=-0.005 Sum_probs=176.7
Q ss_pred ceecCCCCceeeCCCC---CcCCCCCCcccCCC-CCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCC
Q psy13144 163 QCRDINGSPSCSCLPS---YIGSPPNCRPECIQ-NSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTN 238 (1031)
Q Consensus 163 ~C~~~~g~~~C~C~~G---y~g~~~~C~~~C~~-~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~~~~~C~~~~~~~~~~d 238 (1031)
++.|..|+|++.+.|| |.|. .++..+.. ...|.++++|+++..+|.| .|++||+|. .|+. +++
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~--~~~~n~~~~~~~c~ngG~C~~g~~~y~C--~Cp~Gf~G~---~Ce~------ni~ 71 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGA--RDKQNVVALDIKSDDGGKTLKGTMTYNG--EGPIGFRGT---LSSA------NNY 71 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCC--CSSCCEEEEEEECSSTTSEEEEEEEETT--SCCEEEEEE---ECST------TEE
T ss_pred eEeecCCcccCCcCCCCceeecc--ccccccccCCCCcCCCCeecCCCCCeEE--eCCCCcccc---cccc------ccc
Confidence 4678889999999998 5565 66633322 3478899999999999999 999999999 5774 456
Q ss_pred C------CCCCCCCCCCcccccCCCeeeecCCCCcCCCCCCCCCCccCCCCCCCccccCCCcCCCCCCCCCCCCeeeeeC
Q psy13144 239 P------CQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVIN 312 (1031)
Q Consensus 239 ~------C~~~~C~~~g~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~ 312 (1031)
+ |++.||+++++| |.|. .|+++ ++|+. .+|.++|+|++..
T Consensus 72 ec~~~~~c~s~pC~nggtc--------------~~G~------~c~~~------~eC~s--------~pC~ngG~C~~~~ 117 (267)
T 4fbr_A 72 TVENQWGGTSAPWQPGGVW--------------VLGA------RDKQN------IVAVS--------IKSNDGGKTLTGT 117 (267)
T ss_dssp EEEEESSSTTSCEEEEEEE--------------ECCC------CSSCC------EEEEE--------EECSSTTSEEEEE
T ss_pred ccccccCcCCCcccCCCee--------------eccC------ccccc------cccCC--------CCCCCCCEEecCC
Confidence 6 667777776654 3455 55543 35554 5788899999999
Q ss_pred CCceeeCCCCCccCCcCcccccCccccCCCCCCCCCCCCCcccCCccCCCCCCCCCCeeccceeecCCCcccCCCCcCCC
Q psy13144 313 HSPICRCKAGFTGDPFTYCNRIPLQYLMPNNAPMNVPPISAVETPVLEDTCNCAPNAVCKDEVCVCLPDFYGDGYVSCRP 392 (1031)
Q Consensus 313 g~~~C~C~~G~~G~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~g~C~~~~C~C~~G~~G~~c~~~~~ 392 (1031)
.+|+|.|++||+|..++ .+++++.... .-...+|.+.++| |.|..++.++
T Consensus 118 ~sy~C~C~~Gf~G~~Ce--~~~d~C~n~~-----------------~c~s~pC~ngg~c----------~~G~~c~~~i- 167 (267)
T 4fbr_A 118 TTYNGEGPIGFKSEVTD--GDTYSVENQW-----------------GGSAAPWHSGGVW----------VLGTRGKQNV- 167 (267)
T ss_dssp EEETTSCCEEEEEEECC--CCEEEEEEEC-----------------SSTTSCCEEEEEE----------ECCSSTTSCE-
T ss_pred ccEEeeCCCCccccCCC--CCcccccccC-----------------CcCCccccCCcce----------eccccccccc-
Confidence 99999999999999654 3444432110 0011234444333 3455543221
Q ss_pred CCcCCCCCCCCcccccCcccCCCCCCCCCCCCeeeecCCceEeeCCCCCccCCCccccccCCCCCCCCCCCCCCCCCCCc
Q psy13144 393 ECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQ 472 (1031)
Q Consensus 393 eC~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~C~~~~C~~~g~ 472 (1031)
.|.+.||.++++|++..++|+|.|++||+|. +|+ .++++|...+....+.
T Consensus 168 ---------------------~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~---~c~------~~i~ec~~~~~c~~~~ 217 (267)
T 4fbr_A 168 ---------------------INVDAKSNDGGKTLSGTMTYNGEGPIGFRGT---LTS------PDTYTVENQWGGSTAP 217 (267)
T ss_dssp ---------------------EEEEEECSSTTSEEEEEEEETTSCCEEEEEE---EEE------TTEEEEEEECSCTTSC
T ss_pred ---------------------ccCCCCCCCCCEeeCCCCCeEEeCCCCcccc---ccc------cccceeccCCCccCCc
Confidence 2345679999999999999999999999999 888 5667654433333344
Q ss_pred ccccCCceeeecCCCccCCCCCCcCcCcccCCCCCCccccCCCcCCCCCCCCCCCCeeeecCCCceeecCCCCcCC
Q psy13144 473 CREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGD 548 (1031)
Q Consensus 473 C~~~~g~~~C~C~~Gy~G~~~~C~~~C~~~~~c~~~~~C~~~~C~~~c~~~C~~~g~C~~~~gs~~C~C~~Gy~G~ 548 (1031)
|.+. +.+.+.|..++... .|+ .+|.++++|++...+|.|.|++||+|+
T Consensus 218 c~~g-G~~~~~C~~g~n~~------~c~---------------------~~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 218 WNPG-GFWMIGARNGQNVV------ALN---------------------VASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp CEEE-EEEECCCCTTCCEE------EEE---------------------EECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred ccCC-CeEEEecCCCCccc------cCC---------------------cCCCCCCEeeCCCcceeecCCCCcccc
Confidence 4433 45666688877665 332 256788999999999999999999986
No 4
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.76 E-value=1.1e-18 Score=169.31 Aligned_cols=114 Identities=25% Similarity=0.667 Sum_probs=101.0
Q ss_pred CCCCCCC--CCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecC
Q psy13144 37 VYTNPCQ--PSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVIN 114 (1031)
Q Consensus 37 ~~~d~C~--~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~ 114 (1031)
.|||+|. ++||.++|+|++..++|+|+|++||+|. .|+.. +++|.. .+|.++++|+++.
T Consensus 3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~------~C~~~-----~~~C~~--------~~C~~~~~C~~~~ 63 (135)
T 2vj3_A 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP------RCEID-----VNECVS--------NPCQNDATCLDQI 63 (135)
T ss_dssp CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST------TSCEE-----CCTTTT--------CCCCSSCEEEECS
T ss_pred cccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCC------ccccc-----CccCCC--------CCCCCCCEEeCCC
Confidence 4899998 7899999999999999999999999998 66532 345553 5788889999999
Q ss_pred CCceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCceecCCCCceeeCCCCCcCCCCCCc
Q psy13144 115 HSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 115 g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
++|+|.|++||+|.. |+ +++++|+..+|.++++|+++.++|+|+|++||+|. .|+
T Consensus 64 g~~~C~C~~G~~G~~---C~-------------~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~--~C~ 118 (135)
T 2vj3_A 64 GEFQCICMPGYEGVH---CE-------------VNTDECASSPCLHNGRCLDKINEFQCECPTGFTGH--LCQ 118 (135)
T ss_dssp SCEEEECCTTEESSS---SC-------------EECCTTTTCCSTTTCEEEECSSCEEEECCTTEESS--SSC
T ss_pred CCceeeCCCCCcCCc---ce-------------ecCCcccCCCcCCCCEeECCCCCeEEECCCCCcCC--ccC
Confidence 999999999999986 64 56899999999999999999999999999999999 886
No 5
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.75 E-value=5.5e-20 Score=189.14 Aligned_cols=143 Identities=22% Similarity=0.512 Sum_probs=117.3
Q ss_pred CCccccCCCce-eeCCCCCCCCCCCccccccCCCCCCCCCC----CCCCCCCCeecccC-----CceeeeCCCCCcCCCC
Q psy13144 4 FDTKINTYEVF-YSCPPGTTGSPFVQCKPIVHEPVYTNPCQ----PSPCGPNSQCREVN-----HQAVCSCLPNYFGSPP 73 (1031)
Q Consensus 4 ~~~c~~~~~~~-C~C~~G~~g~~~~~C~~~~~~~~~~d~C~----~~~C~~~g~C~~~~-----g~~~C~C~~Gy~g~~~ 73 (1031)
+++|+++.++| |.|++||+|.+...|+ +||+|. ++||.++++|++.. ++|+|+|++||+|...
T Consensus 15 ng~C~~~~g~~~C~C~~G~~g~~~~~C~-------~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~ 87 (186)
T 1z1y_A 15 NGQLVQMSNHFXCMCNEGLVHLSENTCE-------EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED 87 (186)
T ss_dssp TEEEEECSSCEEEEECTTEEEEETTEEE-------ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT
T ss_pred CCEeECCCCCeEeECCCCCccCCCCccC-------CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC
Confidence 67899999988 9999999987545686 679998 78999999999998 8999999999999721
Q ss_pred CCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeee----ecCCCceeeCCCCCccCC--ccccccCCCCCCCCCCCC
Q psy13144 74 ACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCK----VINHSPICRCKAGFTGDP--FTYCNRIPPPPPPQEDVP 147 (1031)
Q Consensus 74 ~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~----~~~g~~~C~C~~Gy~G~~--~~~C~~~~~~~~~~~~~~ 147 (1031)
+|+ +++|.. .+|.++++|+ ++.++|+|.|++||+|.. ...|++
T Consensus 88 ----~C~-------~d~C~~--------~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~------------ 136 (186)
T 1z1y_A 88 ----TCV-------LDVCQY--------XNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTX------------ 136 (186)
T ss_dssp ----EEE-------EGGGTT--------CCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEE------------
T ss_pred ----CCC-------CCcCcC--------CCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceE------------
Confidence 122 356664 4688889999 888999999999999921 123752
Q ss_pred CCCCCCCCCCC-CCCCceecCCCCceeeCCCCCcCCCCCCc
Q psy13144 148 EPVNPCYPSPC-GPYSQCRDINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 148 ~~~d~C~~~~C-~~~g~C~~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
+++++|+ .+| .++++|+++.++|+|.|++||+|+ .++
T Consensus 137 ~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~~G~~g~--~~~ 174 (186)
T 1z1y_A 137 TGETACQ-LXCNTDNEVCXNVEGVYXCQCMEGFTFD--XEX 174 (186)
T ss_dssp EECCCCC-CCCCTTTEEEEEETTEEEEEECTTCEEE--TTT
T ss_pred cCCCccc-ccccccCcceecCCCCeeeECCCCCccC--ccc
Confidence 1358897 499 889999999999999999999998 554
No 6
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.75 E-value=2.2e-18 Score=167.27 Aligned_cols=119 Identities=31% Similarity=0.720 Sum_probs=101.0
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCeeeecCCCceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCce
Q psy13144 85 CPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQC 164 (1031)
Q Consensus 85 C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~g~C 164 (1031)
|.++++|..+ +++|.++|+|+++.++|+|+|++||+|.. |+ +++++|...+|.++++|
T Consensus 2 c~dideC~~~------~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~---C~-------------~~~~~C~~~~C~~~~~C 59 (135)
T 2vj3_A 2 AQDVDECSLG------ANPCEHAGKCINTLGSFECQCLQGYTGPR---CE-------------IDVNECVSNPCQNDATC 59 (135)
T ss_dssp -CCCCTTTSS------SCSSSTTCEEEECSSSEEEECCTTEESTT---SC-------------EECCTTTTCCCCSSCEE
T ss_pred CcccccccCC------CCCCCCCCEeECCCCCEEEECCCCCcCCc---cc-------------ccCccCCCCCCCCCCEE
Confidence 3456777754 37899999999999999999999999986 64 57899999999999999
Q ss_pred ecCCCCceeeCCCCCcCCCCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCC
Q psy13144 165 RDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSP 244 (1031)
Q Consensus 165 ~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~ 244 (1031)
+++.++|+|+|++||+|. .|+ +++++|...|
T Consensus 60 ~~~~g~~~C~C~~G~~G~--~C~-----------------------------------------------~~~~~C~~~~ 90 (135)
T 2vj3_A 60 LDQIGEFQCICMPGYEGV--HCE-----------------------------------------------VNTDECASSP 90 (135)
T ss_dssp EECSSCEEEECCTTEESS--SSC-----------------------------------------------EECCTTTTCC
T ss_pred eCCCCCceeeCCCCCcCC--cce-----------------------------------------------ecCCcccCCC
Confidence 999999999999999998 543 1357787889
Q ss_pred CCCCCcccccCCCeeeecCCCCcCCCCCCCCCCccC
Q psy13144 245 CGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVN 280 (1031)
Q Consensus 245 C~~~g~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~ 280 (1031)
|.++|+|+++.++|+|.|++||+|. .|+..
T Consensus 91 C~~~g~C~~~~g~~~C~C~~G~~G~------~C~~~ 120 (135)
T 2vj3_A 91 CLHNGRCLDKINEFQCECPTGFTGH------LCQVD 120 (135)
T ss_dssp STTTCEEEECSSCEEEECCTTEESS------SSCEE
T ss_pred cCCCCEeECCCCCeEEECCCCCcCC------ccCcc
Confidence 9999999999999999999999998 77643
No 7
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.69 E-value=3.6e-17 Score=160.63 Aligned_cols=116 Identities=26% Similarity=0.706 Sum_probs=94.2
Q ss_pred CCCCCCCCCCCCeecccC--CceeeeCCCCCcCCCCCCCCCCccCC-------CCCCCccccCCCCCCCCCCCCCCCCee
Q psy13144 40 NPCQPSPCGPNSQCREVN--HQAVCSCLPNYFGSPPACRPECTVNS-------DCPLDKSCQNQKCADPCPGTCGQNANC 110 (1031)
Q Consensus 40 d~C~~~~C~~~g~C~~~~--g~~~C~C~~Gy~g~~~~c~~~C~~~~-------~C~~~~~C~~~~C~~~c~~~C~~~~~C 110 (1031)
|+|.++||.++|+|++.. ++|+|+|++||+|. .|+... .|.++++|. +++|.++++|
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~------~C~~~~~~~~~~~~c~~~~~C~--------~~~C~~~g~C 66 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDP------NCSSVVEVASDEEEPTSAGPCT--------PNPCHNGGTC 66 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTT------TTCSCCCCTTTTTSCCCCCTTS--------SCCCCTTCEE
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCC------CCccCccccccccccccCCcCC--------CCCCCCCCEe
Confidence 578999999999999865 68999999999997 454432 233444454 3678999999
Q ss_pred e-------ecCCCceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCceecCCCCceeeCCCCCcCCC
Q psy13144 111 K-------VINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSP 183 (1031)
Q Consensus 111 ~-------~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~ 183 (1031)
+ ++.++|+|+|++||+|.. |+ +++++|+..+|.++++|+++.++|+|+|++||+|+
T Consensus 67 ~~~~~~~~~~~~~~~C~C~~G~~G~~---C~-------------~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~- 129 (143)
T 4d90_A 67 EISEAYRGDTFIGYVCKCPRGFNGIH---CQ-------------HNINECEVEPCKNGGICTDLVANYSCECPGEFMGR- 129 (143)
T ss_dssp EECCCEETTEECCEEEECCTTEESTT---SC-------------EECCTTTTCCSCTTCEEEEETTEEEEECCTTCBST-
T ss_pred cCCCccccCCCCCeEeECcCCCcCCC---cc-------------cCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccC-
Confidence 9 777899999999999986 64 47899999999999999999999999999999999
Q ss_pred CCCc
Q psy13144 184 PNCR 187 (1031)
Q Consensus 184 ~~C~ 187 (1031)
.|+
T Consensus 130 -~c~ 132 (143)
T 4d90_A 130 -NCQ 132 (143)
T ss_dssp -TSC
T ss_pred -Cce
Confidence 665
No 8
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.68 E-value=2.4e-17 Score=183.23 Aligned_cols=167 Identities=25% Similarity=0.719 Sum_probs=72.3
Q ss_pred CCCCCCeeeC-ceeecCCCCccCCcccCCCCCcCCCCCCCCCccccCCCCCceeeecCCCCcCCCCCCCCCcccCCCCCC
Q psy13144 782 NCVPNAECRD-GVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPL 860 (1031)
Q Consensus 782 ~C~~~~~C~~-~~C~C~~G~~G~~c~~~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~G~~g~g~~C~~~C~~~~~C~~ 860 (1031)
+|.++|+|.+ ++|.|++||+|..|+. +.|. .+|.++|+|++ .++|+|++||+|. .|+..
T Consensus 154 ~C~~~G~C~~~~~C~C~~G~~G~~C~~--~~C~--~~C~~~G~C~~-----~~~C~C~~G~~G~------~C~~~----- 213 (324)
T 2ygq_A 154 GCRNGGFCNERRICECPDGFHGPHCEK--ALCT--PRCMNGGLCVT-----PGFCICPPGFYGV------NCDKA----- 213 (324)
T ss_dssp CCCSSCEECTTSCEECCTTEESSSSCE--ESSS--SCCCTTCEECS-----SCCEECCTTCBTT------TTCBC-----
T ss_pred CCCCCCEECCCCeEECCCCCcCCCCCC--CCCC--CCCCCCCEEcC-----CCEEeCCCCccCC------CcccC-----
Confidence 3889999986 5899999999999975 3575 57999999985 4689999999998 66542
Q ss_pred cccccCCcccCCCCCCCCCCCceeecCCCeeeEeCCCCccCCCccccCCCCCCCCCCCCCcCCCCCCCCCCCCCceeecC
Q psy13144 861 DKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDIN 940 (1031)
Q Consensus 861 ~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~ 940 (1031)
.| ..+|.++|+|++. ++|.|++||+|. .|+ +++|. ++|.++++|+.
T Consensus 214 --~C---------~~~C~~~G~C~~~---~~C~C~~G~~G~---~C~--------------~~~C~-~~C~~~g~C~~-- 259 (324)
T 2ygq_A 214 --NC---------STTCFNGGTCFYP---GKCICPPGLEGE---QCE--------------ISKCP-QPCRNGGKCIG-- 259 (324)
T ss_dssp --CC---------SSCCCSSCCBSCS---SCBCCCTTCCTT---TTC---------------------------------
T ss_pred --cC---------CCCCCCCCeeCCC---CeeeCCCCccCC---CCC--------------cCcCC-CcCCCCCEECC--
Confidence 12 3468889999773 699999999999 786 45675 68999999984
Q ss_pred CCceeeCCCCCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCCCceeeCCCCCccCCCCCCcCCC
Q psy13144 941 GSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFSGCYPKP 1020 (1031)
Q Consensus 941 g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~c~~~~ 1020 (1031)
.|+|.|++||+|+ .|+. ++| ...|.++|+|++ .++|.|++||+|..|+.-.+..
T Consensus 260 -~~~C~C~~G~~G~--~C~~-----~~C---------------~~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~~~~ 313 (324)
T 2ygq_A 260 -KSKCKCSKGYQGD--LCSK-----PVC---------------EPGCGAHGTCHE---PNKCQCQEGWHGRHCNKRYEAS 313 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CCEEECCCCCcCC--CCcC-----CCC---------------CCCCCCCCEECC---CCEeECCCCCcCCCCCCCCccc
Confidence 5899999999998 6651 233 235778899987 4689999999999998666655
Q ss_pred CccccccC
Q psy13144 1021 PERTMWDT 1028 (1031)
Q Consensus 1021 ~~~~~~~~ 1028 (1031)
.....++.
T Consensus 314 ~~~~~~~~ 321 (324)
T 2ygq_A 314 LIGTKHHH 321 (324)
T ss_dssp --------
T ss_pred cccceeEe
Confidence 55544443
No 9
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=156.86 Aligned_cols=119 Identities=27% Similarity=0.668 Sum_probs=97.5
Q ss_pred CCCCCCCCceeecC--CCeeeEeCCCCccCCCccccCCCCCCCCCCCCCcCCCCCCCCCCCCCcee-------ecCCCce
Q psy13144 874 PGSCGQNANCRVIN--HNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCR-------DINGSPS 944 (1031)
Q Consensus 874 ~~~C~~~~~C~~~~--g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~-------~~~g~~~ 944 (1031)
+++|.++++|++.. ++|+|+|++||+|. .|+.+.+.........++++|.++||.++++|+ ++.++|+
T Consensus 5 ~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~---~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~ 81 (143)
T 4d90_A 5 PNPCENGGICLPGLADGSFSCECPDGFTDP---NCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYV 81 (143)
T ss_dssp SCCCGGGCEEEC-----CCEEECCTTCCTT---TTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEE
T ss_pred CCcCCCCCEeeCCCCCCCEEeECCCCCCCC---CCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeE
Confidence 35788899999875 68999999999999 788654433333334578999999999999999 7778999
Q ss_pred eeCCCCCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCCCceeeCCCCCccCCCC
Q psy13144 945 CSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFS 1014 (1031)
Q Consensus 945 C~C~~Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 1014 (1031)
|.|++||+|. .|+ .+++||.. ++|.++++|+++.++|+|.|++||+|+.++
T Consensus 82 C~C~~G~~G~--~C~---~~i~~C~~--------------~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 132 (143)
T 4d90_A 82 CKCPRGFNGI--HCQ---HNINECEV--------------EPCKNGGICTDLVANYSCECPGEFMGRNCQ 132 (143)
T ss_dssp EECCTTEEST--TSC---EECCTTTT--------------CCSCTTCEEEEETTEEEEECCTTCBSTTSC
T ss_pred eECcCCCcCC--Ccc---cCCCcCCC--------------CCCCCCCEeECCCCCeEeECCCCCccCCce
Confidence 9999999988 665 37888863 368899999999999999999999999998
No 10
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.67 E-value=5.3e-17 Score=180.45 Aligned_cols=200 Identities=27% Similarity=0.710 Sum_probs=97.5
Q ss_pred CCCCCCCCeeccc-CCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCCCceeeCC
Q psy13144 44 PSPCGPNSQCREV-NHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCK 122 (1031)
Q Consensus 44 ~~~C~~~g~C~~~-~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~ 122 (1031)
..||+++..++.. .-.+.+....|....... .... ..+.|+.. +|+..|.++|+|++ .|+|+|+
T Consensus 106 ~~pC~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~------~~~~C~~~----~C~~~C~~~G~C~~---~~~C~C~ 170 (324)
T 2ygq_A 106 GFPCLGKQDGVAAFEVDVIVMNSEGNTILKTP--QNAI------FFKTCQQA----ECPGGCRNGGFCNE---RRICECP 170 (324)
T ss_dssp ECCBCSSSCEEEEEECEEEEECTTCCEEEECC--SSCE------EEEEECCC----CCSSCCCSSCEECT---TSCEECC
T ss_pred ecccCCCcccccccccceeeecCCCcEecCCc--cccc------ccccccCC----CCCCCCCCCCEECC---CCeEECC
Confidence 3577777666653 235678887775432100 0111 22345543 34578999999985 4899999
Q ss_pred CCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCceecCCCCceeeCCCCCcCCCCCCc-ccCCCCCCCCCCCc
Q psy13144 123 AGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCR-PECIQNSECPYDKA 201 (1031)
Q Consensus 123 ~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~C~-~~C~~~~~C~~~~~ 201 (1031)
+||+|.. |+ .+.|. .+|.++|+|++ .++|+|++||+|. .|+ +.|. ..|.++++
T Consensus 171 ~G~~G~~---C~---------------~~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~--~C~~~~C~--~~C~~~G~ 224 (324)
T 2ygq_A 171 DGFHGPH---CE---------------KALCT-PRCMNGGLCVT---PGFCICPPGFYGV--NCDKANCS--TTCFNGGT 224 (324)
T ss_dssp TTEESSS---SC---------------EESSS-SCCCTTCEECS---SCCEECCTTCBTT--TTCBCCCS--SCCCSSCC
T ss_pred CCCcCCC---CC---------------CCCCC-CCCCCCCEEcC---CCEEeCCCCccCC--CcccCcCC--CCCCCCCe
Confidence 9999986 64 24565 47999999986 4689999999999 898 5674 57888899
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCcccccCCCeeeecCCCCcCCCCCCCCCCccCC
Q psy13144 202 CINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNS 281 (1031)
Q Consensus 202 C~n~~~~~~C~~~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~ 281 (1031)
|++. ++| .|++||+|. .|+ +++|. .+|.++|+|+. .|+|.|++||+|. .|+..
T Consensus 225 C~~~---~~C--~C~~G~~G~---~C~--------~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~------~C~~~- 277 (324)
T 2ygq_A 225 CFYP---GKC--ICPPGLEGE---QCE--------ISKCP-QPCRNGGKCIG---KSKCKCSKGYQGD------LCSKP- 277 (324)
T ss_dssp BSCS---SCB--CCCTTCCTT---TTC-----------------------------------------------------
T ss_pred eCCC---Cee--eCCCCccCC---CCC--------cCcCC-CcCCCCCEECC---CCEEECCCCCcCC------CCcCC-
Confidence 9873 688 999999998 475 35674 68999999984 5799999999998 66532
Q ss_pred CCCCCccccCCCcCCCCCCCCCCCCeeeeeCCCceeeCCCCCccCCcC
Q psy13144 282 DCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFT 329 (1031)
Q Consensus 282 ~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~G~~G~~~~ 329 (1031)
.| ..+|.++|+|++ .++|+|++||+|..++
T Consensus 278 ------~C---------~~~C~~~g~C~~---~~~C~C~~G~~G~~C~ 307 (324)
T 2ygq_A 278 ------VC---------EPGCGAHGTCHE---PNKCQCQEGWHGRHCN 307 (324)
T ss_dssp ------------------------------------------------
T ss_pred ------CC---------CCCCCCCCEECC---CCEeECCCCCcCCCCC
Confidence 12 246778899986 4799999999999653
No 11
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.64 E-value=5.7e-17 Score=163.45 Aligned_cols=149 Identities=26% Similarity=0.667 Sum_probs=111.8
Q ss_pred ceeecCCCCccCCcccCCCCCcCCCCCCCCCccccCCCCCceeeecCCCCcCCCCCCCCCcccCCCCCCcccccCCcccC
Q psy13144 792 GVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVD 871 (1031)
Q Consensus 792 ~~C~C~~G~~G~~c~~~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~G~~g~g~~C~~~C~~~~~C~~~~~C~~~~C~~ 871 (1031)
..|+|++||+|+.|+. +|.....|..+++|+. .++|+|++||+|+ .|+.. .|
T Consensus 17 ~~c~C~~g~~G~~C~~---~C~~~~~c~~~g~C~~-----~g~C~C~~G~~G~------~C~~~-------~C------- 68 (169)
T 2vj2_A 17 SAVTCDDYYYGFGCNK---FCRPRDDFFGHYACDQ-----NGNKTCMEGWMGP------ECNRA-------IC------- 68 (169)
T ss_dssp ----CCTTEETTTTCE---ECCCEEETTEEEEECS-----SCCEEECTTEEST------TSCEE-------CC-------
T ss_pred eeeeCCCcCcCCCccc---ccCCCCCcCCCCEeCC-----CCeeECCCCCcCC------CCCCC-------CC-------
Confidence 3689999999999863 4664456888889974 3589999999998 66542 12
Q ss_pred CCCCCCC-CCCceeecCCCeeeEeCCCCccCCCccccCCCCCCCCCCCCCcCCCCCCCC-CCCCCceeecCCCceeeCCC
Q psy13144 872 PCPGSCG-QNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSP-CGPNSQCRDINGSPSCSCLP 949 (1031)
Q Consensus 872 ~C~~~C~-~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~~~~-C~~~~~C~~~~g~~~C~C~~ 949 (1031)
...|. .++.|++ +|+|+|++||+|. .|+ +|..++ |.++ +|+ ++|+|+|++
T Consensus 69 --~~~C~~~~g~C~~---~~~C~C~~G~~G~---~C~----------------~C~~~~~C~~g-~C~---~~~~C~C~~ 120 (169)
T 2vj2_A 69 --RQGCSPKHGSCKL---PGDCRCQYGWQGL---YCD----------------KCIPHPGCVHG-ICN---EPWQCLCET 120 (169)
T ss_dssp --CTTCCTTTEECSS---TTCCEECTTEESS---SSC----------------EECCCTTCSSE-ECS---STTCCEECT
T ss_pred --CCCCCCCCcccCC---CCeeECCCCCCCC---Ccc----------------cCCCCCCCCCC-CcC---CCCEEeCCC
Confidence 22454 5677876 5799999999998 684 355555 8764 887 679999999
Q ss_pred CCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeec-CCCceeeCCCCCccCCCC
Q psy13144 950 TFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVI-NHSPICTCPDGFVGDAFS 1014 (1031)
Q Consensus 950 Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~-~g~~~C~C~~G~~G~~c~ 1014 (1031)
||+|. .|+ .++++|.. ..+|.++|+|+++ .++|+|+|++||+|+.|+
T Consensus 121 G~~G~--~C~---~~~~~C~~-------------~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 121 NWGGQ--LCD---KDLNYCGT-------------HQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp TEETT--TTC---EESCHHHH-------------TCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred CCCCC--ccc---CCCCCCCC-------------CCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence 99988 666 35666642 1368889999997 789999999999999886
No 12
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.59 E-value=8.2e-16 Score=150.78 Aligned_cols=117 Identities=26% Similarity=0.591 Sum_probs=94.7
Q ss_pred CCCCCCCCCceeecCCCeeeEeCCCCccCC------CccccCCCCCCCCCCCCCcCCCCCCC---CCCCCCceeecCCCc
Q psy13144 873 CPGSCGQNANCRVINHNAVCNCKPGFTGEP------RIRCSKIPPPPPPQDVPEYVNPCIPS---PCGPNSQCRDINGSP 943 (1031)
Q Consensus 873 C~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~------~~~C~~~~~~~~~~~~~~~~~~C~~~---~C~~~~~C~~~~g~~ 943 (1031)
|+.+|.++|+|++. |+|.|++||+|.. ...| ++||+|... ||.++++|+++.++|
T Consensus 5 C~~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C-------------~dideC~~~~~~~C~~~~~C~n~~g~y 68 (143)
T 2bou_A 5 CARWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETC-------------DDINECATLSKVSCGKFSDCWNTEGSY 68 (143)
T ss_dssp CCTTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCC-------------EECCGGGC----CCCTTEEEEECSSCE
T ss_pred CcCcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcC-------------CccccccCCCCCCCCCCCEEEcCCCCe
Confidence 45689999999874 8999999999852 1246 478999864 899999999999999
Q ss_pred eeeCCCCCcCCCCCCC--------CCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCCCceeeCCCCCccCCCC-
Q psy13144 944 SCSCLPTFIGAPPNCR--------PECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFS- 1014 (1031)
Q Consensus 944 ~C~C~~Gy~g~~~~C~--------~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~- 1014 (1031)
+|.|++||+|. .++ ..|++++||... .++|.++++|+++.++|+|+|++||+|....
T Consensus 69 ~C~C~~Gy~g~--~~~~~~~~~~~~~C~dideC~~~------------~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 69 DCVCSPGYEPV--SGAKTFKNESENTCQDVDECSSG------------QHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIP 134 (143)
T ss_dssp EEEECTTEEET--TCCSCBSSGGGCCEEECCHHHHT------------CCCCCTTSEEEECSSCEEEECCSSSCBCTTCC
T ss_pred EeECCCCcccC--cCccccccCCCCCcCCccCccCc------------CCCCCCCCEEECCCCCEEeeCCCCcccCCCCc
Confidence 99999999998 332 267788888643 2478889999999999999999999998764
Q ss_pred CCcCC
Q psy13144 1015 GCYPK 1019 (1031)
Q Consensus 1015 ~c~~~ 1019 (1031)
.|.+.
T Consensus 135 ~C~~~ 139 (143)
T 2bou_A 135 NNQKD 139 (143)
T ss_dssp SSBTT
T ss_pred cCccC
Confidence 45543
No 13
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.59 E-value=3.6e-16 Score=157.58 Aligned_cols=150 Identities=26% Similarity=0.631 Sum_probs=109.5
Q ss_pred CCceEeeCCCCCccCCCccccccCCCCCCCCCCCC-CCCCCCCcccccCCceeeecCCCccCCCCCCcCcCcccCCCCCC
Q psy13144 430 NHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHP-SPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLD 508 (1031)
Q Consensus 430 ~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~C~~-~~C~~~g~C~~~~g~~~C~C~~Gy~G~~~~C~~~C~~~~~c~~~ 508 (1031)
...+.|+|++||+|. .|+ ..|.+ .+|.++++|.. .++|+|++||+|. .|+..
T Consensus 14 ~~~~~c~C~~g~~G~---~C~---------~~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~------~C~~~------ 66 (169)
T 2vj2_A 14 EGRSAVTCDDYYYGF---GCN---------KFCRPRDDFFGHYACDQ---NGNKTCMEGWMGP------ECNRA------ 66 (169)
T ss_dssp -------CCTTEETT---TTC---------EECCCEEETTEEEEECS---SCCEEECTTEEST------TSCEE------
T ss_pred ccCeeeeCCCcCcCC---Ccc---------cccCCCCCcCCCCEeCC---CCeeECCCCCcCC------CCCCC------
Confidence 456799999999999 675 23543 25777788864 4689999999999 77653
Q ss_pred ccccCCCcCCCCCCCCC-CCCeeeecCCCceeecCCCCcCCCcCccccccCcCcchhhccccccccCCCCCCCccccccc
Q psy13144 509 KACFNQKCVDPCPGTCG-QNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLV 587 (1031)
Q Consensus 509 ~~C~~~~C~~~c~~~C~-~~g~C~~~~gs~~C~C~~Gy~G~~c~~C~~~~~~~~~~~~~~~~~~~~~g~~G~~~~~C~~~ 587 (1031)
.|. ..|. .++.|++ +|+|+|++||+|..|++|.
T Consensus 67 -~C~---------~~C~~~~g~C~~---~~~C~C~~G~~G~~C~~C~--------------------------------- 100 (169)
T 2vj2_A 67 -ICR---------QGCSPKHGSCKL---PGDCRCQYGWQGLYCDKCI--------------------------------- 100 (169)
T ss_dssp -CCC---------TTCCTTTEECSS---TTCCEECTTEESSSSCEEC---------------------------------
T ss_pred -CCC---------CCCCCCCcccCC---CCeeECCCCCCCCCcccCC---------------------------------
Confidence 222 2454 4677865 5899999999999876432
Q ss_pred CCCCCCCCCCCCCC-CCCCCeeeecCCceeeeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCC
Q psy13144 588 QNEPVYTNPCQPSP-CGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESP 666 (1031)
Q Consensus 588 ~~~~~~~~eC~~~~-C~~~~~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~ 666 (1031)
..+ |.+ ++|+ ++|+|+|++||+|. .|+
T Consensus 101 -----------~~~~C~~-g~C~---~~~~C~C~~G~~G~------~C~------------------------------- 128 (169)
T 2vj2_A 101 -----------PHPGCVH-GICN---EPWQCLCETNWGGQ------LCD------------------------------- 128 (169)
T ss_dssp -----------CCTTCSS-EECS---STTCCEECTTEETT------TTC-------------------------------
T ss_pred -----------CCCCCCC-CCcC---CCCEEeCCCCCCCC------ccc-------------------------------
Confidence 223 654 4787 57899999999998 354
Q ss_pred CCcCCcCCC-CCCCCCCceeec-CCCCeeecCCCCcCCCCCCC
Q psy13144 667 PEYVNPCIP-SPCGPYSQCRDI-GGSPSCSCLPNYIGAPPNCR 707 (1031)
Q Consensus 667 ~~dideC~~-~~C~~~g~C~~~-~g~y~C~C~~Gy~g~~~~C~ 707 (1031)
++|++|.. .+|.++++|+++ .++|+|+|++||+|. +|+
T Consensus 129 -~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~--~Ce 168 (169)
T 2vj2_A 129 -KDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGP--NCE 168 (169)
T ss_dssp -EESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCST--TSC
T ss_pred -CCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCc--CcC
Confidence 46888974 899999999997 899999999999998 665
No 14
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.56 E-value=4.5e-15 Score=176.05 Aligned_cols=132 Identities=23% Similarity=0.534 Sum_probs=99.5
Q ss_pred CCCCCCCCCCCCCCeecccCC-ceee-eCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCC---eeee
Q psy13144 38 YTNPCQPSPCGPNSQCREVNH-QAVC-SCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNA---NCKV 112 (1031)
Q Consensus 38 ~~d~C~~~~C~~~g~C~~~~g-~~~C-~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~---~C~~ 112 (1031)
+||+|.++||.++++|++..+ +|+| .|++||+|.+. .|+ ++++|... ++.|.+++ +|++
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~----~Ce------DiDEC~~~------p~~C~~gg~~~~CvN 65 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT----HCE------DLDECALV------PDICFSTSKVPRCVN 65 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSS----SCC------BCCTTTTS------CCCSCCCSSSCCEEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCC----Ccc------ccccccCC------CCcccCCccccceee
Confidence 789999999999999999875 5999 99999998632 343 45677654 35699888 9999
Q ss_pred cCCCceee-CCCCCccCCccccccCCCCCCCCCCCCCCCCCCCC--CCCCCCCceecCC----CCceeeCCCCCcCCCCC
Q psy13144 113 INHSPICR-CKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYP--SPCGPYSQCRDIN----GSPSCSCLPSYIGSPPN 185 (1031)
Q Consensus 113 ~~g~~~C~-C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~--~~C~~~g~C~~~~----g~~~C~C~~Gy~g~~~~ 185 (1031)
+.++|+|. |++||+|..++ ...+.... .....++++++|+. .+|.++++|+++. ++|+|+|++||+|.+..
T Consensus 66 t~gsY~C~~C~~Gy~G~~c~-g~g~~~~~-~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~ 143 (634)
T 1yo8_A 66 TQPGFHCLPCPPRYRGNQPV-GVGLEAAK-TEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLI 143 (634)
T ss_dssp CSSSEEECCCCTTEEECCCE-ESSSHHHH-SCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSS
T ss_pred ccCceecccCCCCcccCccc-cccccccc-cCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcc
Confidence 99999999 99999998732 00000000 00001146899985 5999999999998 99999999999997778
Q ss_pred Cc
Q psy13144 186 CR 187 (1031)
Q Consensus 186 C~ 187 (1031)
|+
T Consensus 144 Ce 145 (634)
T 1yo8_A 144 CG 145 (634)
T ss_dssp EE
T ss_pred cc
Confidence 86
No 15
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.54 E-value=3e-16 Score=157.38 Aligned_cols=139 Identities=22% Similarity=0.494 Sum_probs=96.3
Q ss_pred CCCCCC-CCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCcc--ccCCCCCCCCCCCC--CCCCeeee
Q psy13144 38 YTNPCQ-PSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKS--CQNQKCADPCPGTC--GQNANCKV 112 (1031)
Q Consensus 38 ~~d~C~-~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~--C~~~~C~~~c~~~C--~~~~~C~~ 112 (1031)
|||||+ ++||. +++|+++.++|+|+|++||++.+. ...|++ +++ |... .+.| ..+++|++
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~--g~~C~d------~~~~~C~~~------~~~c~~~~~~~C~~ 66 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPT--RVGCVD------TRSGNCYLD------IRPRGDNGDTACSN 66 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTT--SSBEEC------CCCEEEEEE------C----------CEE
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCC--CCcccC------CCCCcccCC------CcccCCCCCCcccC
Confidence 789998 58997 689999999999999999996420 014443 333 6543 1333 34678999
Q ss_pred cCC----CceeeCCCCCc-cCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCcee-cCCCCceeeCCC--CCcCCCC
Q psy13144 113 INH----SPICRCKAGFT-GDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCR-DINGSPSCSCLP--SYIGSPP 184 (1031)
Q Consensus 113 ~~g----~~~C~C~~Gy~-G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~g~C~-~~~g~~~C~C~~--Gy~g~~~ 184 (1031)
+.+ +|+|.|++||. |.. |+ +|. +..++|+|.|++ ||+|...
T Consensus 67 ~~~~~~~~~~C~C~~G~~~~~~---C~----------------------------~C~~~~~~~y~C~C~~g~G~~~~~~ 115 (162)
T 1uzk_A 67 EIGVGVSKASCCCSLGKAWGTP---CE----------------------------MCPAVNTSEYKILCPGGEGFRPNPI 115 (162)
T ss_dssp EEEEEECHHHHHTTTCCEETTT---TE----------------------------ECCCTTSHHHHHHCTTCTTEEECTT
T ss_pred CcCCcccCceeeCCCCCCcCCC---cc----------------------------cCCCCCCCCceeECCCCCCcccCCC
Confidence 877 89999999998 443 32 122 245678899987 8888610
Q ss_pred CCcccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCC--CCCCCCCcccccCCCeeeec
Q psy13144 185 NCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQP--SPCGPNSQCREVNHQAVCSC 262 (1031)
Q Consensus 185 ~C~~~C~~~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~~~~~C~~~~~~~~~~d~C~~--~~C~~~g~C~~~~g~y~C~C 262 (1031)
. . .| ++||||+. .+|.+ ++|+++.++|+|.|
T Consensus 116 --~----------------------------------~---~c-------~dideC~~~~~~C~~-g~C~n~~gsy~C~C 148 (162)
T 1uzk_A 116 --T----------------------------------V---IL-------EDIDECQELPGLCQG-GKCINTFGSFQCRC 148 (162)
T ss_dssp --T----------------------------------C---CE-------EECCHHHHCGGGGBT-SEEEECSSCEEEEC
T ss_pred --C----------------------------------C---cc-------CccccccCCCCCcCC-CEeEcCCCCEEeeC
Confidence 0 0 12 35788874 46985 79999999999999
Q ss_pred CCCCcCC
Q psy13144 263 LPNYFGS 269 (1031)
Q Consensus 263 ~~Gy~g~ 269 (1031)
++||+|.
T Consensus 149 ~~Gy~g~ 155 (162)
T 1uzk_A 149 PTGYYLN 155 (162)
T ss_dssp CTTCCBC
T ss_pred CCCccCC
Confidence 9999997
No 16
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.54 E-value=1e-14 Score=173.00 Aligned_cols=122 Identities=27% Similarity=0.660 Sum_probs=102.2
Q ss_pred CCCCCCCCCCCCCCeeeecCC-ceee-eCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCCCCcC
Q psy13144 593 YTNPCQPSPCGPNSQCREVNH-QAVC-SCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYV 670 (1031)
Q Consensus 593 ~~~eC~~~~C~~~~~C~~~~g-~y~C-~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~~~di 670 (1031)
+|++|.++||.++++|+++.+ +|+| .|++||+|.+..| ++|
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~C-------------------------------------eDi 44 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHC-------------------------------------EDL 44 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSC-------------------------------------CBC
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCc-------------------------------------ccc
Confidence 689999999999999999875 5999 9999999975433 368
Q ss_pred CcCCCCC--CCCCC---ceeecCCCCeee-cCCCCcCCCCCCC-----------cCcccCCCCCCccccccCcCCCCCCC
Q psy13144 671 NPCIPSP--CGPYS---QCRDIGGSPSCS-CLPNYIGAPPNCR-----------PECVMNSECPSNEACINEKCGDPCPG 733 (1031)
Q Consensus 671 deC~~~~--C~~~g---~C~~~~g~y~C~-C~~Gy~g~~~~C~-----------~~C~~~~~C~~~~~C~~~~c~~~c~~ 733 (1031)
+||...+ |.+++ +|+++.++|+|. |++||+|. .++ ..|+++++|... ++
T Consensus 45 DEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~--~c~g~g~~~~~~dg~~C~dideC~~~------------~~ 110 (634)
T 1yo8_A 45 DECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGN--QPVGVGLEAAKTEKQVCEPENPCKDK------------TH 110 (634)
T ss_dssp CTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEEC--CCEESSSHHHHSCCCCEEECCTTTTT------------CC
T ss_pred ccccCCCCcccCCccccceeeccCceecccCCCCcccC--ccccccccccccCCCcccccccccCC------------Cc
Confidence 9998777 99998 999999999999 99999998 553 347788999764 35
Q ss_pred CCCCCCeeeccC----CCceeeCCCCcccCCCCCCCC
Q psy13144 734 SCGYNAECKIIN----HTPICTCPDGFIGDPFTSCSP 766 (1031)
Q Consensus 734 ~C~~~~~C~~~~----g~~~C~C~~G~~g~~~~~C~~ 766 (1031)
+|.++++|+++. ++|+|+|++||+|.+. .|+.
T Consensus 111 pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~-~Ce~ 146 (634)
T 1yo8_A 111 NCHKHAECIYLGHFSDPMYKCECQTGYAGDGL-ICGE 146 (634)
T ss_dssp CCCTTEEEEECCTTCSSSEEEEECTTEEESSS-SEEE
T ss_pred ccccCccccccccccccceeeeccCCccccCc-cccc
Confidence 788999999998 9999999999999653 5653
No 17
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.53 E-value=5e-15 Score=145.16 Aligned_cols=133 Identities=26% Similarity=0.569 Sum_probs=96.9
Q ss_pred CCCCCCCCCeeeecCCCceeecCCCCcCCCcCccccccCcCcchhhccccccccCCCCCCCcccccccCCCCCCCCCCCC
Q psy13144 520 CPGTCGQNANCRVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQP 599 (1031)
Q Consensus 520 c~~~C~~~g~C~~~~gs~~C~C~~Gy~G~~c~~C~~~~~~~~~~~~~~~~~~~~~g~~G~~~~~C~~~~~~~~~~~eC~~ 599 (1031)
|+.+|.++++|++. |+|.|++||+|.. ..- ..+...|+ +|++|..
T Consensus 5 C~~~C~~~~~C~~~---~~C~C~~G~~g~~-~~~------------------------~~~~~~C~-------dideC~~ 49 (143)
T 2bou_A 5 CARWCPQDSSCVNA---TACRCNPGFSSFS-EII------------------------TTPMETCD-------DINECAT 49 (143)
T ss_dssp CCTTCCTTEEESSS---SCEEECTTEECSS-SSB------------------------CSTTCCCE-------ECCGGGC
T ss_pred CcCcCCCCCEEcCC---CEEeCCCCCcCcc-ccc------------------------cCCCCcCC-------ccccccC
Confidence 35689999999874 8999999999863 100 00001342 5899986
Q ss_pred C---CCCCCCeeeecCCceeeeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCCCCcCCcCC--
Q psy13144 600 S---PCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNPCI-- 674 (1031)
Q Consensus 600 ~---~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~~~dideC~-- 674 (1031)
. +|.++++|+++.++|+|+|++||+|.. ++.. +.+ .....++|||||.
T Consensus 50 ~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~------~~~~--------~~~-------------~~~~~C~dideC~~~ 102 (143)
T 2bou_A 50 LSKVSCGKFSDCWNTEGSYDCVCSPGYEPVS------GAKT--------FKN-------------ESENTCQDVDECSSG 102 (143)
T ss_dssp ----CCCTTEEEEECSSCEEEEECTTEEETT------CCSC--------BSS-------------GGGCCEEECCHHHHT
T ss_pred CCCCCCCCCCEEEcCCCCeEeECCCCcccCc------Cccc--------ccc-------------CCCCCcCCccCccCc
Confidence 4 899999999999999999999999873 2100 000 0001124799997
Q ss_pred CCCCCCCCceeecCCCCeeecCCCCcCCCCCCCcCcccCCCC
Q psy13144 675 PSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSEC 716 (1031)
Q Consensus 675 ~~~C~~~g~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C 716 (1031)
..+|.++++|+++.|+|+|.|++||+|. .....|..+++|
T Consensus 103 ~~~C~~~~~C~n~~g~y~C~C~~Gy~g~--~~~~~C~~~~~C 142 (143)
T 2bou_A 103 QHQCDSSTVCFNTVGSYSCRCRPGWKPR--HGIPNNQKDTVC 142 (143)
T ss_dssp CCCCCTTSEEEECSSCEEEECCSSSCBC--TTCCSSBTTCCB
T ss_pred CCCCCCCCEEECCCCCEEeeCCCCcccC--CCCccCccCCcc
Confidence 4899999999999999999999999999 666666666554
No 18
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.50 E-value=4.4e-14 Score=170.28 Aligned_cols=121 Identities=26% Similarity=0.660 Sum_probs=96.0
Q ss_pred CCCCCeeeCceeecC----CCCccCCcccCCCCCcCC--CCCCCCCccccCCCCCceeeecCCCCcCCCCCCCCCcc--c
Q psy13144 783 CVPNAECRDGVCVCL----PDYYGDGYVSCGPECILN--NDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECT--V 854 (1031)
Q Consensus 783 C~~~~~C~~~~C~C~----~G~~G~~c~~~~~~C~~~--~~C~~~g~C~~~~~~~~~~C~C~~G~~g~g~~C~~~C~--~ 854 (1031)
|+++|+|+++.|+|+ +||+|..|+.++++|... .+|.++|+|++ |+|.|++||+|. .|+ .
T Consensus 495 Cs~~G~C~~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~------g~C~C~~Gy~G~------~CeC~~ 562 (690)
T 3fcs_B 495 CSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC------GDCLCDSDWTGY------YCNCTT 562 (690)
T ss_dssp GGGSEEECSSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET------TEEEECTTEESS------SSCEEC
T ss_pred CCCCCEEECCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC------CeeECcCCCcCC------CCccCC
Confidence 778899999999999 999999998878889853 57999999985 599999999999 665 1
Q ss_pred CCCCCCcccccCCcccCCCCCCCCCCCceeecCCCeeeEe-CCCCccCCCccccCCCCCCCCCCCCCcCCCCCCCCCCCC
Q psy13144 855 NTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNC-KPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPN 933 (1031)
Q Consensus 855 ~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C-~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~~~~C~~~ 933 (1031)
. ...|.... ..+|.++|+|++ .+|.| ++||+|. +|+. -..| +++|.++
T Consensus 563 ~-----~~~C~~~~-----g~~C~~~G~C~~----g~C~C~~~Gy~G~---~Ce~-------------C~~C-~~~C~~~ 611 (690)
T 3fcs_B 563 R-----TDTCMSSN-----GLLCSGRGKCEC----GSCVCIQPGSYGD---TCEK-------------CPTC-PDACTFK 611 (690)
T ss_dssp C-----CTTTBCTT-----SSBTSSSCEEET----TEEECCSTTCBST---TSCB-------------CTTS-CCTTTSC
T ss_pred C-----CCcccCCC-----CCCCCCCCEEeC----CEEECCCCCccCC---CcCc-------------CCCC-CCCCCCC
Confidence 1 11333210 146899999976 39999 9999999 7962 1345 5789999
Q ss_pred CceeecCCCceeeCCCCCcCC
Q psy13144 934 SQCRDINGSPSCSCLPTFIGA 954 (1031)
Q Consensus 934 ~~C~~~~g~~~C~C~~Gy~g~ 954 (1031)
++|++ |..||+|.
T Consensus 612 g~Cv~--------C~~g~tG~ 624 (690)
T 3fcs_B 612 KECVE--------CKKFDRGA 624 (690)
T ss_dssp CGGGT--------TTTTCCSS
T ss_pred CCccc--------CCCCCccC
Confidence 99986 99999998
No 19
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.48 E-value=8.5e-14 Score=167.78 Aligned_cols=177 Identities=25% Similarity=0.624 Sum_probs=129.0
Q ss_pred CCCCCCCCCCCeeeecCCcee---eeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCCCCcCCc
Q psy13144 596 PCQPSPCGPNSQCREVNHQAV---CSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNP 672 (1031)
Q Consensus 596 eC~~~~C~~~~~C~~~~g~y~---C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~~~dide 672 (1031)
+|.+.||.++++|.+..|+|. |.|++||+|. .|+... +.. .....++
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~------~Ce~~~-------------------~~~-----~~~~~~~ 485 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGS------QCECSE-------------------EDY-----RPSQQDE 485 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSS------SSCCSC-------------------C-----------CCC
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCC------ceeecc-------------------Ccc-----CCccCCc
Confidence 566889999999998888888 9999999999 455211 000 0012356
Q ss_pred CCC----CCCCCCCceeecCCCCeeecC----CCCcCCCCCCCcCcccCCCCCCccccccCcCCCCCCCCCCCCCeeecc
Q psy13144 673 CIP----SPCGPYSQCRDIGGSPSCSCL----PNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKII 744 (1031)
Q Consensus 673 C~~----~~C~~~g~C~~~~g~y~C~C~----~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~c~~~c~~~C~~~~~C~~~ 744 (1031)
|.. .+|.++|+|++ ++|.|+ +||+|. .|+. ++++|.... ..+|.++|+|.+
T Consensus 486 C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~--~Ce~---~~~~C~~~~-----------~~~C~~~G~C~~- 544 (690)
T 3fcs_B 486 CSPREGQPVCSQRGECLC----GQCVCHSSDFGKITGK--YCEC---DDFSCVRYK-----------GEMCSGHGQCSC- 544 (690)
T ss_dssp CSSSSSSCGGGGSEEECS----SSEEECCCSSCCCBST--TSCB---CSSCCCBSS-----------SSBGGGSEEEET-
T ss_pred CCCCCCCCCCCCCCEEEC----CeeEeecCCCCCeeCC--CcCc---ccCcCcCCC-----------CCCCCCCCEecC-
Confidence 764 45999999984 589999 999999 8863 356676420 136888899976
Q ss_pred CCCceeeCCCCcccCCCCCCCCCCCCCCCCCccCCCCCCCCCCeeeCceeec-CCCCccCCcccCCCCCcCCCCCCCCCc
Q psy13144 745 NHTPICTCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVC-LPDYYGDGYVSCGPECILNNDCPSNKA 823 (1031)
Q Consensus 745 ~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~~~~~~~c~C~~~~~C~~~~C~C-~~G~~G~~c~~~~~~C~~~~~C~~~g~ 823 (1031)
|+|.|++||+|. .|+-. .....|......+|.++|+|++++|.| ++||+|..|+.+ +.|. .+|.++++
T Consensus 545 ---g~C~C~~Gy~G~---~CeC~--~~~~~C~~~~g~~C~~~G~C~~g~C~C~~~Gy~G~~Ce~C-~~C~--~~C~~~g~ 613 (690)
T 3fcs_B 545 ---GDCLCDSDWTGY---YCNCT--TRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKC-PTCP--DACTFKKE 613 (690)
T ss_dssp ---TEEEECTTEESS---SSCEE--CCCTTTBCTTSSBTSSSCEEETTEEECCSTTCBSTTSCBC-TTSC--CTTTSCCG
T ss_pred ---CeeECcCCCcCC---CCccC--CCCCcccCCCCCCCCCCCEEeCCEEECCCCCccCCCcCcC-CCCC--CCCCCCCC
Confidence 699999999999 56610 011122222224599999999999999 999999999762 4563 68999999
Q ss_pred cccCCCCCceeeecCCCCcCC
Q psy13144 824 CIRNKFNKQAVCSCLPNYFGS 844 (1031)
Q Consensus 824 C~~~~~~~~~~C~C~~G~~g~ 844 (1031)
|++ |..||+|.
T Consensus 614 Cv~----------C~~g~tG~ 624 (690)
T 3fcs_B 614 CVE----------CKKFDRGA 624 (690)
T ss_dssp GGT----------TTTTCCSS
T ss_pred ccc----------CCCCCccC
Confidence 984 99999998
No 20
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.47 E-value=2.9e-15 Score=150.09 Aligned_cols=145 Identities=21% Similarity=0.404 Sum_probs=100.4
Q ss_pred CCCCCcCCCCCCCCCccccCCCCCceeeecCCCCcCC--CCCCCCCcccCCCCCCcccccCCcccCCCCCCC--CCCCce
Q psy13144 808 CGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGS--PPACRPECTVNTDCPLDKACVNQKCVDPCPGSC--GQNANC 883 (1031)
Q Consensus 808 ~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~G~~g~--g~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C--~~~~~C 883 (1031)
+++||...++|. +++|+++. ++|+|+|++||++. +++| ++.. ...|... +.+| .++++|
T Consensus 2 dideC~~~~~C~-~~~C~n~~--gsy~C~C~~Gy~~~~~g~~C----~d~~----~~~C~~~------~~~c~~~~~~~C 64 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTP--GSYICDCPPDFELNPTRVGC----VDTR----SGNCYLD------IRPRGDNGDTAC 64 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEET--TEEEEECCTTCEECTTSSBE----ECCC----CEEEEEE------C----------C
T ss_pred ccccCCCCCCCC-CCEeECCC--CCEEEeCCCCCeECCCCCcc----cCCC----CCcccCC------CcccCCCCCCcc
Confidence 678998657897 68999987 99999999999954 3334 3211 1124432 1223 357899
Q ss_pred eecCC----CeeeEeCCCCc-cCCCccccCCCCCCCCCCCCCcCCCCCCCCCCCCCceeecCCCceeeCCC--CCcCCCC
Q psy13144 884 RVINH----NAVCNCKPGFT-GEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLP--TFIGAPP 956 (1031)
Q Consensus 884 ~~~~g----~~~C~C~~Gy~-G~~~~~C~~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~--Gy~g~~~ 956 (1031)
++..+ +|+|.|++||. |. .|+ .|.. +..++|+|.|++ ||++++.
T Consensus 65 ~~~~~~~~~~~~C~C~~G~~~~~---~C~---------------------~C~~-----~~~~~y~C~C~~g~G~~~~~~ 115 (162)
T 1uzk_A 65 SNEIGVGVSKASCCCSLGKAWGT---PCE---------------------MCPA-----VNTSEYKILCPGGEGFRPNPI 115 (162)
T ss_dssp EEEEEEEECHHHHHTTTCCEETT---TTE---------------------ECCC-----TTSHHHHHHCTTCTTEEECTT
T ss_pred cCCcCCcccCceeeCCCCCCcCC---Ccc---------------------cCCC-----CCCCCceeECCCCCCcccCCC
Confidence 99877 79999999998 44 353 1221 246789999998 9999842
Q ss_pred CCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCCCceeeCCCCCccCCC
Q psy13144 957 NCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAF 1013 (1031)
Q Consensus 957 ~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c 1013 (1031)
...|++||||... +++|. +++|+++.|+|+|+|++||+|+.-
T Consensus 116 --~~~c~dideC~~~------------~~~C~-~g~C~n~~gsy~C~C~~Gy~g~~d 157 (162)
T 1uzk_A 116 --TVILEDIDECQEL------------PGLCQ-GGKCINTFGSFQCRCPTGYYLNED 157 (162)
T ss_dssp --TCCEEECCHHHHC------------GGGGB-TSEEEECSSCEEEECCTTCCBCTT
T ss_pred --CCccCccccccCC------------CCCcC-CCEeEcCCCCEEeeCCCCccCCCC
Confidence 2456899999753 13476 479999999999999999999753
No 21
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.47 E-value=3.9e-15 Score=140.44 Aligned_cols=108 Identities=25% Similarity=0.622 Sum_probs=84.4
Q ss_pred CCCCCCCCCCCCCCCeeccc-CCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCC
Q psy13144 37 VYTNPCQPSPCGPNSQCREV-NHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINH 115 (1031)
Q Consensus 37 ~~~d~C~~~~C~~~g~C~~~-~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g 115 (1031)
.+||+|.++||.+ +|+++ .++|+|+|++||+|.. + ++++|+. .|. +++|. ++|++ .+
T Consensus 2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~------~-------~~~~C~~-~C~---~~~C~--~~C~~-~~ 59 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIP------H-------EPHRCQM-FCN---QTACP--ADCDP-NT 59 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEET------T-------EEEEEEE-CCC---SSEEE--CEECT-TS
T ss_pred CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccC------C-------CCCcccc-ccC---CCCCC--CcccC-CC
Confidence 3789999999984 99999 9999999999999972 1 1234432 121 24454 68888 58
Q ss_pred CceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCCC-CCCCCCCceecCCCCceeeCCCCCcCC
Q psy13144 116 SPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYP-SPCGPYSQCRDINGSPSCSCLPSYIGS 182 (1031)
Q Consensus 116 ~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~-~~C~~~g~C~~~~g~~~C~C~~Gy~g~ 182 (1031)
+|+|+|++||++.....|+ +||+|+. ++| +++|+++.++|+|+|++||+|.
T Consensus 60 ~y~C~C~~Gy~~~~g~~C~--------------dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 60 QASCECPEGYILDDGFICT--------------DIDECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp TTCEECCTTEEEETTTEEE--------------ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred CeEeECCCCccCCCCCccc--------------cccccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 9999999999954222374 7889986 899 6899999999999999999987
No 22
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.35 E-value=1.6e-14 Score=142.14 Aligned_cols=123 Identities=19% Similarity=0.420 Sum_probs=81.7
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCC----CCCCCCCCCCCCCCeeee
Q psy13144 37 VYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQ----KCADPCPGTCGQNANCKV 112 (1031)
Q Consensus 37 ~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~----~C~~~c~~~C~~~~~C~~ 112 (1031)
.|||+|+++||.+ |+|+++.++|+|+|++||+|.. +...|++... ..|..+ .|... .+.|..++.|.+
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~--~~~~C~~~~~----~~C~~~~~g~~C~~~-~~~c~~~~~C~~ 73 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDP--TKTICIETIK----GTCWQTVIDGRCEIN-INGATLKSQCCS 73 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECT--TSSBEEECCC----EEEEEEEETTEEEEE-EEEEECHHHHHT
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCC--CCCeecCCCC----CcccCCCCCCccccC-CCccccCCcccc
Confidence 4899999999985 7999999999999999999873 2234444221 111110 01000 011111223333
Q ss_pred cCCC----------ceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCCC--CCCCCCCceecCCCCceeeCCCCCc
Q psy13144 113 INHS----------PICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYP--SPCGPYSQCRDINGSPSCSCLPSYI 180 (1031)
Q Consensus 113 ~~g~----------~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~--~~C~~~g~C~~~~g~~~C~C~~Gy~ 180 (1031)
..++ |.|.|++||++.....|+ +||||+. .+|.+ ++|+++.++|+|.|++||+
T Consensus 74 ~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~--------------dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~ 138 (147)
T 2w86_A 74 SLGAAWGSPCTLCQVDPICGKGYSRIKGTQCE--------------DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMT 138 (147)
T ss_dssp TTCSEETTTTEECCCCTTTCTTEEEEETTEEE--------------ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCC
T ss_pred CcCcccCCCcccCCCcccCCCccccCCCCccC--------------ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCc
Confidence 3333 889999999632112374 6899984 45985 6999999999999999999
Q ss_pred CC
Q psy13144 181 GS 182 (1031)
Q Consensus 181 g~ 182 (1031)
|+
T Consensus 139 g~ 140 (147)
T 2w86_A 139 LD 140 (147)
T ss_dssp BC
T ss_pred cC
Confidence 88
No 23
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.33 E-value=1.8e-13 Score=128.97 Aligned_cols=104 Identities=25% Similarity=0.621 Sum_probs=84.6
Q ss_pred CCCCCCCCCCCCCCCceecC-CCCceeeCCCCCcCCCCCCc-ccCCC---CCCCCCCCcccCCCCCCCCCCCCCCCCCCC
Q psy13144 148 EPVNPCYPSPCGPYSQCRDI-NGSPSCSCLPSYIGSPPNCR-PECIQ---NSECPYDKACINEKCADPCPGFCPPGTTGS 222 (1031)
Q Consensus 148 ~~~d~C~~~~C~~~g~C~~~-~g~~~C~C~~Gy~g~~~~C~-~~C~~---~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~ 222 (1031)
++||+|+++||.+ +|+++ .++|+|+|++||+|. .++ ++|.. ...|. ++|++ .++|+| .|++||++.
T Consensus 2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~--~~~~~~C~~~C~~~~C~--~~C~~-~~~y~C--~C~~Gy~~~ 72 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPI--PHEPHRCQMFCNQTACP--ADCDP-NTQASC--ECPEGYILD 72 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEE--TTEEEEEEECCCSSEEE--CEECT-TSTTCE--ECCTTEEEE
T ss_pred CccccCCCCCCCC--CCCCCCCCCEEeECCCCcccc--CCCCCccccccCCCCCC--CcccC-CCCeEe--ECCCCccCC
Confidence 5799999999984 99999 899999999999998 443 44543 23343 78888 589999 999999954
Q ss_pred CCcccccccCCCCCCCCCCC-CCCCCCCcccccCCCeeeecCCCCcCC
Q psy13144 223 PFVQCKPIVHEPVYTNPCQP-SPCGPNSQCREVNHQAVCSCLPNYFGS 269 (1031)
Q Consensus 223 ~~~~C~~~~~~~~~~d~C~~-~~C~~~g~C~~~~g~y~C~C~~Gy~g~ 269 (1031)
....|+ +||+|+. +|| +++|+++.++|+|.|++||+|.
T Consensus 73 ~g~~C~-------dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 73 DGFICT-------DIDECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp TTTEEE-------ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred CCCccc-------cccccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 222564 5799986 899 6899999999999999999987
No 24
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.24 E-value=2.9e-13 Score=133.24 Aligned_cols=111 Identities=20% Similarity=0.424 Sum_probs=79.6
Q ss_pred CCCCCCCCCCCCCCCceecCCCCceeeCCCCCcCCC--CCCcc-------------cCCC-CCCCCCCCcccCCCC----
Q psy13144 148 EPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSP--PNCRP-------------ECIQ-NSECPYDKACINEKC---- 207 (1031)
Q Consensus 148 ~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~--~~C~~-------------~C~~-~~~C~~~~~C~n~~~---- 207 (1031)
+|||||+++||.+ ++|+++.++|+|+|++||+|+. ..|++ .|.. .+.|.....|.+..+
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g 80 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWG 80 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEET
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccC
Confidence 5799999999985 7999999999999999999872 12321 1111 122222233444333
Q ss_pred ------CCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCC--CCCCCCCcccccCCCeeeecCCCCcCC
Q psy13144 208 ------ADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQP--SPCGPNSQCREVNHQAVCSCLPNYFGS 269 (1031)
Q Consensus 208 ------~~~C~~~C~~G~~g~~~~~C~~~~~~~~~~d~C~~--~~C~~~g~C~~~~g~y~C~C~~Gy~g~ 269 (1031)
.|.| .|++||++.....|+ +||||+. .+|.+ ++|+++.++|+|.|++||+|+
T Consensus 81 ~~C~~c~~~C--~C~~Gy~~~~g~~C~-------dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~ 140 (147)
T 2w86_A 81 SPCTLCQVDP--ICGKGYSRIKGTQCE-------DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLD 140 (147)
T ss_dssp TTTEECCCCT--TTCTTEEEEETTEEE-------ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBC
T ss_pred CCcccCCCcc--cCCCccccCCCCccC-------ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccC
Confidence 3889 999999632112575 5799985 45985 699999999999999999988
No 25
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.22 E-value=1.5e-11 Score=141.29 Aligned_cols=136 Identities=28% Similarity=0.686 Sum_probs=92.8
Q ss_pred CCeeecCCCCcCCCCCCCcCcccCCCCCCccccccCcCCCCCCCCCCCCCeeeccCCCceeeCCCCcccCCCCCCCCCCC
Q psy13144 690 SPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPP 769 (1031)
Q Consensus 690 ~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~ 769 (1031)
.+.|.|++||.|. .|+..| .+|.++|+|.+ ++|+|+|++||+|. .|+.
T Consensus 184 ~~~c~C~~g~~G~--~C~~~C----------------------~~C~~~G~C~~--~~g~C~C~~G~~G~---~Ce~--- 231 (423)
T 2gy5_A 184 LIVRRCEAQKWGP--ECNHLC----------------------TACMNNGVCHE--DTGECICPPGFMGR---TCEK--- 231 (423)
T ss_dssp EEECSSCTTEEST--TSCEEC----------------------CCCCTTCEECT--TTCCEECCTTEEST---TSCE---
T ss_pred ccCCcCCCCCCCC--CCCCCC----------------------CCCCCCCEEEC--CCCcEeCCCCccCC---Cccc---
Confidence 3468999999998 666422 14677889977 45799999999998 5652
Q ss_pred CCCCCCccCCCCCCCCCCeeeCceeecCCCCccCCcccCCCCCcCCCCCCCCCccccCCCCCceeeecCCCCcCCCCCCC
Q psy13144 770 EPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACR 849 (1031)
Q Consensus 770 ~~~~~~~~~~~c~C~~~~~C~~~~C~C~~G~~G~~c~~~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~G~~g~g~~C~ 849 (1031)
.|.+||+|..|. ++|.....|.++++|.. ++|+|.|++||+|.
T Consensus 232 -------------------------~C~~g~~g~~C~---~~C~~~~~C~~~g~C~~----~~~~C~C~~G~~G~----- 274 (423)
T 2gy5_A 232 -------------------------ACELHTFGRTCK---ERCSGQEGCKSYVFCLP----DPYGCSCATGWKGL----- 274 (423)
T ss_dssp -------------------------ECCTTEESTTSC---EECCSTTTTTTCCEEET----TTTEEECCBTCBSG-----
T ss_pred -------------------------ccCCCCCCCCcC---ccCCCCCCCCCCCEECC----CCCeEEeCCCcccc-----
Confidence 156778887664 35654467888888863 67899999999988
Q ss_pred CCcccCCCCCCcccccCCcccCCCCCCCCCCCceeecCCCeeeEeCCCCccCCCcccc
Q psy13144 850 PECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCS 907 (1031)
Q Consensus 850 ~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~ 907 (1031)
.|+. .|.... ....|..+| +|.++++|.+.. .|.|++||+|. +|+
T Consensus 275 -~C~~--~C~~G~--~G~~C~~~C--~C~ngg~C~~~~---~C~C~~G~~G~---~Ce 319 (423)
T 2gy5_A 275 -QCNE--ACHPGF--YGPDCKLRC--SCNNGEMCDRFQ---GCLCSPGWQGL---QCE 319 (423)
T ss_dssp -GGCB--CCCTTB--CSBTTCCBC--CCTTCCEEETTT---EEECCTTCBST---TSC
T ss_pred -cccC--ccCCCC--cCCcccccc--cCCCCCEecCCC---ceECCCCCcCC---CCc
Confidence 6653 122110 001122223 577888887754 38888888888 786
No 26
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.18 E-value=1.8e-11 Score=147.16 Aligned_cols=175 Identities=27% Similarity=0.661 Sum_probs=119.5
Q ss_pred CCCCCCCeeeccCCCceeeCCCCcccCCCCCCCCCCCCCC-----CCCccC-CCCCCCCCCeeeCceeecC------CCC
Q psy13144 733 GSCGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPV-----QPVIQE-DTCNCVPNAECRDGVCVCL------PDY 800 (1031)
Q Consensus 733 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~-----~~~~~~-~~c~C~~~~~C~~~~C~C~------~G~ 800 (1031)
..|.++|+|.. ++|.|++||+|. .|+-...... ..|... ..-+|.++|+|..+.|+|+ +||
T Consensus 435 ~~Cs~~G~C~~----g~C~C~~Gy~G~---~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G~C~C~~~~~~~~G~ 507 (687)
T 3k6s_B 435 SLCHGKGFLEC----GICRCDTGYIGK---NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLI 507 (687)
T ss_dssp STGGGSEEESS----SSEEECSSEEST---TSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETTEEEECCCCSTTCCE
T ss_pred CCCCCCCEEeC----CEeEcCCCCcCC---cccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCCEEEcCCCCCCCCCc
Confidence 46888888873 489999999999 5662110000 011110 1124889999999999999 999
Q ss_pred ccCCcccCCCCCcCC--CCCCC--CCccccCCCCCceeeecCCCCcCCCCCCCCCcccCCCCCCcccccCCcccCCCCCC
Q psy13144 801 YGDGYVSCGPECILN--NDCPS--NKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGS 876 (1031)
Q Consensus 801 ~G~~c~~~~~~C~~~--~~C~~--~g~C~~~~~~~~~~C~C~~G~~g~g~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~ 876 (1031)
+|..|+.+...|... .+|.+ +|+|+.. +|+|++||+|. .|+... ....|.... ..+
T Consensus 508 ~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g------~C~C~~G~~G~------~Cec~~---~~~~C~~~~-----g~~ 567 (687)
T 3k6s_B 508 YGQYCECDTINCERYNGQVCGGPGRGLCFCG------KCRCHPGFEGS------ACQCER---TTEGCLNPR-----RVE 567 (687)
T ss_dssp ESTTSCEESSCSCEETTEETSHHHHEEEETT------EEEECTTCCST------TSCSCC---SSCTTBCTT-----CSB
T ss_pred cccccccccccccCCCCcCcCCCCCCeEECC------EEEcCCCCcCC------CCccCC---CCCCCCCCC-----CCC
Confidence 999998777888742 46988 8999852 89999999999 665211 011333210 236
Q ss_pred CCCCCceeecCCCeeeEeCCCCccCCCccccCCCCCCCCCCCCCcCCCCCCCCCCCCCceeecCCCceeeCCCCCcCC-C
Q psy13144 877 CGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGA-P 955 (1031)
Q Consensus 877 C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~-~ 955 (1031)
|.++|+|.. ++|.|++||+|. +|+. -..| +++|.+++.|+ .|...++|. +
T Consensus 568 Cs~~G~C~~----g~C~C~~Gy~G~---~Ce~-------------c~~C-~~~C~~~g~Cv--------~C~~~~~G~~~ 618 (687)
T 3k6s_B 568 CSGRGRCRC----NVCECHSGYQLP---LCQE-------------CPGC-PSPCGKYISCA--------ECLKFEKGPFG 618 (687)
T ss_dssp TSSSCCBCS----SCBCCSTTCCTT---TTCC-------------CTTS-CCCCTTTHHHH--------TTTTSCSCCCS
T ss_pred CCCCCcCCC----CEEECCCCCcCC---CCCC-------------CCCC-CcccCCCCCCC--------cccCCCCCCCC
Confidence 888999987 489999999999 7962 1356 36899999997 344444443 1
Q ss_pred CCCCCCcc
Q psy13144 956 PNCRPECI 963 (1031)
Q Consensus 956 ~~C~~~C~ 963 (1031)
..|+..|.
T Consensus 619 ~~C~~~C~ 626 (687)
T 3k6s_B 619 KNCSAACP 626 (687)
T ss_dssp SCSSSSCC
T ss_pred cccccccC
Confidence 15665554
No 27
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.16 E-value=2.4e-11 Score=146.01 Aligned_cols=134 Identities=24% Similarity=0.603 Sum_probs=101.8
Q ss_pred CCCCCCeeeCceeecCCCCccCCcccCCC---------CCcCC---CCCCCCCccccCCCCCceeeecC------CCCcC
Q psy13144 782 NCVPNAECRDGVCVCLPDYYGDGYVSCGP---------ECILN---NDCPSNKACIRNKFNKQAVCSCL------PNYFG 843 (1031)
Q Consensus 782 ~C~~~~~C~~~~C~C~~G~~G~~c~~~~~---------~C~~~---~~C~~~g~C~~~~~~~~~~C~C~------~G~~g 843 (1031)
+|+++|+|..+.|.|++||+|..|+..++ .|... .+|.++|+|+. + +|+|+ +||+|
T Consensus 436 ~Cs~~G~C~~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----G--~C~C~~~~~~~~G~~G 509 (687)
T 3k6s_B 436 LCHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----G--QCLCHTSDVPGKLIYG 509 (687)
T ss_dssp TGGGSEEESSSSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET----T--EEEECCCCSTTCCEES
T ss_pred CCCCCCEEeCCEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC----C--EEEcCCCCCCCCCccc
Confidence 37788999999999999999999984433 57643 35999999994 2 89999 99999
Q ss_pred CCCCCCCCcccCCCCCCcccccCCcccCCCCCCCCC--CCceeecCCCeeeEeCCCCccCCCccccCCCCCCCCCCCCCc
Q psy13144 844 SPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQ--NANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEY 921 (1031)
Q Consensus 844 ~g~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~--~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~ 921 (1031)
. .|+.... .|... + ..+|.+ +|+|+. .+|+|++||+|. .|+- ..+
T Consensus 510 ~------~Ce~~~~-----~C~~~---~--~~~C~~~~~G~C~~----g~C~C~~G~~G~---~Cec----------~~~ 556 (687)
T 3k6s_B 510 Q------YCECDTI-----NCERY---N--GQVCGGPGRGLCFC----GKCRCHPGFEGS---ACQC----------ERT 556 (687)
T ss_dssp T------TSCEESS-----CSCEE---T--TEETSHHHHEEEET----TEEEECTTCCST---TSCS----------CCS
T ss_pred c------ccccccc-----cccCC---C--CcCcCCCCCCeEEC----CEEEcCCCCcCC---CCcc----------CCC
Confidence 9 7763211 23311 0 135887 899985 389999999999 7862 134
Q ss_pred CCCCCCC---CCCCCCceeecCCCceeeCCCCCcCCCCCCCC
Q psy13144 922 VNPCIPS---PCGPNSQCRDINGSPSCSCLPTFIGAPPNCRP 960 (1031)
Q Consensus 922 ~~~C~~~---~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~ 960 (1031)
++.|..+ +|.++++|+. ++|.|++||+|. .|+.
T Consensus 557 ~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~--~Ce~ 592 (687)
T 3k6s_B 557 TEGCLNPRRVECSGRGRCRC----NVCECHSGYQLP--LCQE 592 (687)
T ss_dssp SCTTBCTTCSBTSSSCCBCS----SCBCCSTTCCTT--TTCC
T ss_pred CCCCCCCCCCCCCCCCcCCC----CEEECCCCCcCC--CCCC
Confidence 6788654 8999999987 489999999999 7873
No 28
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.15 E-value=3.3e-11 Score=138.54 Aligned_cols=117 Identities=27% Similarity=0.699 Sum_probs=75.7
Q ss_pred CCCCCCeeeecCCCceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCC-CCCCCCCCceecCCCCceeeCCCCCcC
Q psy13144 103 TCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCY-PSPCGPYSQCRDINGSPSCSCLPSYIG 181 (1031)
Q Consensus 103 ~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~-~~~C~~~g~C~~~~g~~~C~C~~Gy~g 181 (1031)
+|.++|+|++ ++|+|+|++||+|.. |+..-...-.... -.++|. ..+|.++++|. .++|+|.|++||+|
T Consensus 204 ~C~~~G~C~~--~~g~C~C~~G~~G~~---Ce~~C~~g~~g~~---C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G 273 (423)
T 2gy5_A 204 ACMNNGVCHE--DTGECICPPGFMGRT---CEKACELHTFGRT---CKERCSGQEGCKSYVFCL--PDPYGCSCATGWKG 273 (423)
T ss_dssp CCCTTCEECT--TTCCEECCTTEESTT---SCEECCTTEESTT---SCEECCSTTTTTTCCEEE--TTTTEEECCBTCBS
T ss_pred CCCCCCEEEC--CCCcEeCCCCccCCC---cccccCCCCCCCC---cCccCCCCCCCCCCCEEC--CCCCeEEeCCCccc
Confidence 3555666655 345677777777665 3310000000000 012454 45688888885 57889999999999
Q ss_pred CCCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCcccccCCCeeee
Q psy13144 182 SPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNSQCREVNHQAVCS 261 (1031)
Q Consensus 182 ~~~~C~~~C~~~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~y~C~ 261 (1031)
. .|+. .|.+||.|. .|+. +| +|.++++|.+..+ |.
T Consensus 274 ~--~C~~-------------------------~C~~G~~G~---~C~~---------~C---~C~ngg~C~~~~~---C~ 308 (423)
T 2gy5_A 274 L--QCNE-------------------------ACHPGFYGP---DCKL---------RC---SCNNGEMCDRFQG---CL 308 (423)
T ss_dssp G--GGCB-------------------------CCCTTBCSB---TTCC---------BC---CCTTCCEEETTTE---EE
T ss_pred c--cccC-------------------------ccCCCCcCC---cccc---------cc---cCCCCCEecCCCc---eE
Confidence 8 7762 488999997 4641 33 7889999987653 99
Q ss_pred cCCCCcCCCCCCCCCCccC
Q psy13144 262 CLPNYFGSPPACRPECTVN 280 (1031)
Q Consensus 262 C~~Gy~g~~~~C~~~C~~~ 280 (1031)
|++||+|. .|+..
T Consensus 309 C~~G~~G~------~Ce~~ 321 (423)
T 2gy5_A 309 CSPGWQGL------QCERE 321 (423)
T ss_dssp CCTTCBST------TSCBC
T ss_pred CCCCCcCC------CCccC
Confidence 99999999 77653
No 29
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.15 E-value=3.1e-11 Score=105.63 Aligned_cols=75 Identities=31% Similarity=0.690 Sum_probs=62.7
Q ss_pred CcCCCCCC-CCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCC
Q psy13144 920 EYVNPCIP-SPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINH 998 (1031)
Q Consensus 920 ~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g 998 (1031)
+|||+|.. +||.+ ++|+++.++|+|.|++||++++. .|.+++||... ++|.+ ++|+++.+
T Consensus 3 ~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~----~C~dideC~~~-------------~~C~~-~~C~n~~g 63 (82)
T 1emn_A 3 VDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGN----ECVDTDECSVG-------------NPCGN-GTCKNVIG 63 (82)
T ss_dssp CCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETT----EEEECCGGGTC-------------CTTSS-SCEEECSS
T ss_pred CccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCC----ccCCcccccCC-------------CCCCC-CEeECCCC
Confidence 57899985 89986 89999999999999999996543 46689999642 35664 69999999
Q ss_pred CceeeCCCCCccCCC
Q psy13144 999 SPICTCPDGFVGDAF 1013 (1031)
Q Consensus 999 ~~~C~C~~G~~G~~c 1013 (1031)
+|+|.|++||+|+.-
T Consensus 64 ~y~C~C~~G~~g~~~ 78 (82)
T 1emn_A 64 GFECTCEEGFEPGPM 78 (82)
T ss_dssp SEEECCSSSSCCCSS
T ss_pred CEEeECCCCeEeCCC
Confidence 999999999998764
No 30
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.13 E-value=3.5e-11 Score=105.33 Aligned_cols=74 Identities=27% Similarity=0.640 Sum_probs=60.1
Q ss_pred CCCCCCCC-CCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCC
Q psy13144 37 VYTNPCQP-SPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINH 115 (1031)
Q Consensus 37 ~~~d~C~~-~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g 115 (1031)
.+||+|.. +||.+ |+|+++.++|+|+|++||++.+. .|+ ++++|... ++|.+ ++|+++.+
T Consensus 3 ~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~----~C~------dideC~~~-------~~C~~-~~C~n~~g 63 (82)
T 1emn_A 3 VDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGN----ECV------DTDECSVG-------NPCGN-GTCKNVIG 63 (82)
T ss_dssp CCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETT----EEE------ECCGGGTC-------CTTSS-SCEEECSS
T ss_pred CccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCC----ccC------CcccccCC-------CCCCC-CEeECCCC
Confidence 48999985 89975 89999999999999999984321 454 35677642 56764 69999999
Q ss_pred CceeeCCCCCccCC
Q psy13144 116 SPICRCKAGFTGDP 129 (1031)
Q Consensus 116 ~~~C~C~~Gy~G~~ 129 (1031)
+|+|.|++||+|+.
T Consensus 64 ~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 64 GFECTCEEGFEPGP 77 (82)
T ss_dssp SEEECCSSSSCCCS
T ss_pred CEEeECCCCeEeCC
Confidence 99999999999875
No 31
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.12 E-value=3e-11 Score=107.88 Aligned_cols=83 Identities=18% Similarity=0.352 Sum_probs=65.9
Q ss_pred ceeeecCCCCcCCCCCCCCCcccCCCCCCcccccCCcccCCCCCCCCCCCceeecCCCeeeEeCCCCccCCCccccCCCC
Q psy13144 832 QAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPP 911 (1031)
Q Consensus 832 ~~~C~C~~G~~g~g~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~ 911 (1031)
+|+|+|.+||+|. .|+. ++|... + |++..++|+|+|++||+ +|+.
T Consensus 1 sy~C~C~~g~~g~------~c~~-------~~c~~~--------p------C~n~~~~y~C~C~~G~~-----~C~~--- 45 (91)
T 1tpg_A 1 SYQVICRDEKTQM------IYQQ-------HQSWLR--------P------VLRSNRVEYCWCNSGRA-----QCHS--- 45 (91)
T ss_dssp CCCCCCBCSSSCC------BCCS-------SCEEEE--------E------CSSSSCEEEEECSSSCC-----BCCE---
T ss_pred CeeeECCCCCcCC------eECC-------CcccCC--------c------cccCCCCcEeECCCCCc-----cccc---
Confidence 5899999999998 5532 133322 2 34456789999999997 4751
Q ss_pred CCCCCCCCCcCCCCCCCCCCCCCceeecC--CCceeeCCCCCcCCCCCCC
Q psy13144 912 PPPPQDVPEYVNPCIPSPCGPNSQCRDIN--GSPSCSCLPTFIGAPPNCR 959 (1031)
Q Consensus 912 ~~~~~~~~~~~~~C~~~~C~~~~~C~~~~--g~~~C~C~~Gy~g~~~~C~ 959 (1031)
.++++|.++||+++++|+++. ++|+|.|++||+|. +|+
T Consensus 46 --------~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~--~Ce 85 (91)
T 1tpg_A 46 --------VPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGK--SCE 85 (91)
T ss_dssp --------ECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSS--SCC
T ss_pred --------CcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCC--cCC
Confidence 257999999999999999987 99999999999998 776
No 32
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.12 E-value=3.8e-11 Score=107.16 Aligned_cols=84 Identities=19% Similarity=0.335 Sum_probs=68.8
Q ss_pred CceeecCCCCcCCCcCccccccCcCcchhhccccccccCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCeeeecCCce
Q psy13144 536 SPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQCREVNHQA 615 (1031)
Q Consensus 536 s~~C~C~~Gy~G~~c~~C~~~~~~~~~~~~~~~~~~~~~g~~G~~~~~C~~~~~~~~~~~eC~~~~C~~~~~C~~~~g~y 615 (1031)
+|+|+|.+||+|..++ +++|...||. +..++|
T Consensus 1 sy~C~C~~g~~g~~c~------------------------------------------~~~c~~~pC~------n~~~~y 32 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQ------------------------------------------QHQSWLRPVL------RSNRVE 32 (91)
T ss_dssp CCCCCCBCSSSCCBCC------------------------------------------SSCEEEEECS------SSSCEE
T ss_pred CeeeECCCCCcCCeEC------------------------------------------CCcccCCccc------cCCCCc
Confidence 5899999999998653 5777666654 457899
Q ss_pred eeeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCCCCcCCcCCCCCCCCCCceeecC--CCCee
Q psy13144 616 VCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVNPCIPSPCGPYSQCRDIG--GSPSC 693 (1031)
Q Consensus 616 ~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~~~dideC~~~~C~~~g~C~~~~--g~y~C 693 (1031)
+|.|++||+ . |+. +++++|.++||.++|+|++.. ++|+|
T Consensus 33 ~C~C~~G~~-~-------C~~-------------------------------~~~~~C~~~pC~ngg~C~~~~~~~~~~C 73 (91)
T 1tpg_A 33 YCWCNSGRA-Q-------CHS-------------------------------VPVKSCSEPRCFNGGTCQQALYFSDFVC 73 (91)
T ss_dssp EEECSSSCC-B-------CCE-------------------------------ECEEECSSCCSCTTCEEEEESSSSCEEE
T ss_pred EeECCCCCc-c-------ccc-------------------------------CcCCcccCCCCCCCCEeecCCCCCCeEe
Confidence 999999997 2 330 258999999999999999987 99999
Q ss_pred ecCCCCcCCCCCCCc
Q psy13144 694 SCLPNYIGAPPNCRP 708 (1031)
Q Consensus 694 ~C~~Gy~g~~~~C~~ 708 (1031)
.|++||+|. +|+.
T Consensus 74 ~C~~G~~G~--~Ce~ 86 (91)
T 1tpg_A 74 QCPEGFAGK--SCEI 86 (91)
T ss_dssp ECCTTCBSS--SCCB
T ss_pred ECCCCCcCC--cCCc
Confidence 999999998 8874
No 33
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.10 E-value=4.7e-11 Score=105.62 Aligned_cols=77 Identities=27% Similarity=0.572 Sum_probs=60.8
Q ss_pred CCCCCCCCC--CCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCC
Q psy13144 38 YTNPCQPSP--CGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINH 115 (1031)
Q Consensus 38 ~~d~C~~~~--C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g 115 (1031)
|||||+.+| |.+ ++|+++.++|+|+|++||++.. .++..|.++++|... ++.|. +++|+|+.|
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~-------~~g~~C~dideC~~~------~~~C~-~~~C~n~~g 66 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGF-------MMMKNCMDIDECQRD------PLLCR-GGVCHNTEG 66 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECT-------TTSSSEEECCHHHHC------SSTTT-TSEEEEETT
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccC-------CCCCccCCcccccCC------CCcCC-CCEeEcCCC
Confidence 789998765 965 6999999999999999999641 012234456788765 24575 589999999
Q ss_pred CceeeCCCCCccCC
Q psy13144 116 SPICRCKAGFTGDP 129 (1031)
Q Consensus 116 ~~~C~C~~Gy~G~~ 129 (1031)
+|+|.|++||+|..
T Consensus 67 ~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 67 SYRCECPPGHQLSP 80 (86)
T ss_dssp EEEEESCTTSCCCS
T ss_pred CEEEECcCCcccCC
Confidence 99999999999874
No 34
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.08 E-value=5.6e-11 Score=105.10 Aligned_cols=77 Identities=29% Similarity=0.621 Sum_probs=61.3
Q ss_pred cCCCCCCCC--CCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCC
Q psy13144 921 YVNPCIPSP--CGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINH 998 (1031)
Q Consensus 921 ~~~~C~~~~--C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g 998 (1031)
|||||+.+| |.+ ++|+++.++|+|.|++||++.... ...|+++|||... +..|. +++|+++.|
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~-g~~C~dideC~~~------------~~~C~-~~~C~n~~g 66 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMM-MKNCMDIDECQRD------------PLLCR-GGVCHNTEG 66 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTT-SSSEEECCHHHHC------------SSTTT-TSEEEEETT
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCC-CCccCCcccccCC------------CCcCC-CCEeEcCCC
Confidence 689998765 976 599999999999999999964210 2356789998643 22465 689999999
Q ss_pred CceeeCCCCCccCC
Q psy13144 999 SPICTCPDGFVGDA 1012 (1031)
Q Consensus 999 ~~~C~C~~G~~G~~ 1012 (1031)
+|+|.|++||+++.
T Consensus 67 ~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 67 SYRCECPPGHQLSP 80 (86)
T ss_dssp EEEEESCTTSCCCS
T ss_pred CEEEECcCCcccCC
Confidence 99999999999864
No 35
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.07 E-value=9e-11 Score=109.78 Aligned_cols=97 Identities=22% Similarity=0.443 Sum_probs=66.8
Q ss_pred CCCCCCCCCC--------CCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCC
Q psy13144 37 VYTNPCQPSP--------CGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNA 108 (1031)
Q Consensus 37 ~~~d~C~~~~--------C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~ 108 (1031)
+|+|+|+++| |.++|+|++..++|+|+|++||+|. .|++..+ .++|... ++.|.+
T Consensus 4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~------~C~~~~~---~~~C~~~------~~~C~~-- 66 (114)
T 1aut_L 4 VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGR------FCQREVS---FLNCSLD------NGGCTH-- 66 (114)
T ss_dssp ----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEEST------TSCEECC---SSSSSSG------GGGCSS--
T ss_pred eecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCC------CcCcCCc---CCcCcCC------CCCCCC--
Confidence 5889999999 9999999999999999999999998 5766432 2345432 244553
Q ss_pred eeeecCCCceeeCCCCCccCCc-cccccCCCCCCCCCCCCCCCCCCCCCCCCCCCceecC
Q psy13144 109 NCKVINHSPICRCKAGFTGDPF-TYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQCRDI 167 (1031)
Q Consensus 109 ~C~~~~g~~~C~C~~Gy~G~~~-~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~g~C~~~ 167 (1031)
+|+++.++|+|.|++||+|... ..|+ + ....||...++|+..
T Consensus 67 ~C~n~~g~y~C~C~~G~~~~~~g~~C~--------------~---~~~~pC~~~~~~i~~ 109 (114)
T 1aut_L 67 YCLEEVGWRRCSCAPGYKLGDDLLQCH--------------P---AVKFPCGRPWKRMEK 109 (114)
T ss_dssp EEEECSSSEEEECCTTEEECTTSSCEE--------------E---CSSSCTTCCC-----
T ss_pred EeECCCCCEEeECCCCeeECCCCCccC--------------c---CcccCCCCCCccCCC
Confidence 8999999999999999997542 2354 1 124578888877754
No 36
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.98 E-value=2e-10 Score=101.76 Aligned_cols=71 Identities=21% Similarity=0.526 Sum_probs=56.0
Q ss_pred CCCCCCCCC--CCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCC
Q psy13144 38 YTNPCQPSP--CGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINH 115 (1031)
Q Consensus 38 ~~d~C~~~~--C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g 115 (1031)
+||+|+.+| | ++++|+++.++|+|+|++||++.. ++..|.++++|.. ++|. ++|+++.|
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~--------~g~~C~dideC~~--------~~C~--~~C~n~~g 62 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNL--------KSKSCEDIDECSE--------NMCA--QLCVNYPG 62 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEET--------TTTEEECCCHHHH--------SCCS--SEECCCSS
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECC--------CCCcCCCcCeeCC--------CCCC--CEEEccCC
Confidence 789999877 8 789999999999999999999652 2233445678875 4565 69999999
Q ss_pred CceeeCCCCCccC
Q psy13144 116 SPICRCKAGFTGD 128 (1031)
Q Consensus 116 ~~~C~C~~Gy~G~ 128 (1031)
+|+|.|+ ||.|-
T Consensus 63 ~y~C~C~-g~~G~ 74 (87)
T 1z6c_A 63 GYTCYCD-GKKGF 74 (87)
T ss_dssp SCCEECC-SSSCC
T ss_pred CEEEECC-CCcCC
Confidence 9999996 55443
No 37
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.97 E-value=2.7e-10 Score=135.79 Aligned_cols=69 Identities=26% Similarity=0.519 Sum_probs=16.4
Q ss_pred CCCCeeeecCCceEeeCCCCCccCCCccccccCC-CCCCCCCCCCCCCCCCCccccc--CCceeeecCCCccCC
Q psy13144 421 GEGAICDVINHAVSCNCPAGTTGNPFVLCKPVQN-EPVYTNPCHPSPCGPNSQCREV--NHQAVCSCLPNYFGS 491 (1031)
Q Consensus 421 ~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~-~~~~~~~C~~~~C~~~g~C~~~--~g~~~C~C~~Gy~G~ 491 (1031)
.+++.|... +++|.|++||+|.....|.+..+ ...+++.|.+.+|.+++.+... ..+++|.|++||+|.
T Consensus 450 ~~~~~Cd~~--tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~ 521 (525)
T 4aqs_A 450 PGGNPCDSE--TGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGR 521 (525)
T ss_dssp CSSCCBCTT--TCCBCBCTTCCSTTTCC----------------------------------------------
T ss_pred cCCCcccCC--CCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCC
Confidence 334444433 45899999999993322222111 1134677888899988877654 345689999999999
No 38
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.96 E-value=4.7e-10 Score=133.76 Aligned_cols=110 Identities=25% Similarity=0.488 Sum_probs=35.3
Q ss_pred eeecCCCCee-ecCCCCcCCCCCCCcCcccCCCCCCccccccCcCCCCCCCCCCCCCeeeccCCCceeeCCCCcccCCCC
Q psy13144 684 CRDIGGSPSC-SCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDPFT 762 (1031)
Q Consensus 684 C~~~~g~y~C-~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~ 762 (1031)
|.....+++| .|++||+|. .+.. ...|... +|.+ .+.|.+++.|... ++.|+|++||+|.
T Consensus 411 C~~g~~G~~C~~C~~Gy~G~--~c~~----~~~C~~C-~C~~-------~gtc~~~~~Cd~~--tg~C~C~~g~~G~--- 471 (525)
T 4aqs_A 411 CKLHVEGERCDVCKEGFYDL--SAED----PYGCKSC-ACNP-------LGTIPGGNPCDSE--TGYCYCKRLVTGQ--- 471 (525)
T ss_dssp BCTTEETTTTCEECTTEECC--CTTS----TTSSEEC-CCCT-------TTBCCSSCCBCTT--TCCBCBCTTCCST---
T ss_pred CCCCCCCCcccCCCCCCcCC--CCCC----CCCCccC-CCCC-------CceecCCCcccCC--CCEEECCCCCcCC---
Confidence 4444344556 699999987 4432 2333321 1111 1234444555443 4589999999998
Q ss_pred CCCCCCCCCCCCCccCCCCCCCCCCeeeCceeecCCCCccCCcccCCCCCcCCCCCCCCCccccCCCCCceeeecCCCCc
Q psy13144 763 SCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCGPECILNNDCPSNKACIRNKFNKQAVCSCLPNYF 842 (1031)
Q Consensus 763 ~C~~~~~~~~~~~~~~~~c~C~~~~~C~~~~C~C~~G~~G~~c~~~~~~C~~~~~C~~~g~C~~~~~~~~~~C~C~~G~~ 842 (1031)
.|+ .|.+||+|... .++.|.. .+|.+++.+...-...+++|+|++||+
T Consensus 472 ~Ce-----------------------------~C~~G~~g~~~--~~~~C~~-C~C~~~gs~~~~C~~~tG~C~C~~G~~ 519 (525)
T 4aqs_A 472 RCD-----------------------------QCLPQHWGLSN--DLDGCRP-CDCDLGGALNNSCSEDSGQCSCLPHMI 519 (525)
T ss_dssp TTC-----------------------------C-----------------------------------------------
T ss_pred Ccc-----------------------------cCCCCccCCCC--CCCCCcC-CCCCCCCccCCccCCCCCeeECCCCCc
Confidence 454 25678877542 3445653 567766666543222466899999999
Q ss_pred CC
Q psy13144 843 GS 844 (1031)
Q Consensus 843 g~ 844 (1031)
|.
T Consensus 520 G~ 521 (525)
T 4aqs_A 520 GR 521 (525)
T ss_dssp --
T ss_pred CC
Confidence 98
No 39
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.95 E-value=4.2e-10 Score=109.90 Aligned_cols=75 Identities=27% Similarity=0.685 Sum_probs=59.5
Q ss_pred CcCCCCCCCCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCee-eecCC
Q psy13144 920 EYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALC-KVINH 998 (1031)
Q Consensus 920 ~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C-~~~~g 998 (1031)
.|||+|.++||.++++|+++.++|+|.|++||+|. .|+ ++++|.... ..|.. +| +++.|
T Consensus 46 ~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~--~C~----~~deC~~~~------------~~C~~--~C~~n~~g 105 (146)
T 1x7a_L 46 VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK--NCE----LDATCNIKN------------GRCKQ--FCKTGADS 105 (146)
T ss_dssp ----CCSSCSSCTTCEEEECSSCEEEECCSSEEST--TTC----EECCTTSGG------------GSCSS--BCCCCSSS
T ss_pred CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC--cCC----CCccccCCC------------CCCcC--CCCCCCCC
Confidence 57899999999999999999999999999999987 554 568887531 23543 89 89999
Q ss_pred CceeeCCCCCc----cCCCC
Q psy13144 999 SPICTCPDGFV----GDAFS 1014 (1031)
Q Consensus 999 ~~~C~C~~G~~----G~~c~ 1014 (1031)
+|+|.|++||+ |..|+
T Consensus 106 ~y~C~C~~Gy~l~~dG~~C~ 125 (146)
T 1x7a_L 106 KVLCSCTTGYRLAPDQKSCK 125 (146)
T ss_dssp CCCCBCCTTEEECTTSSSEE
T ss_pred CEEeEcCCCcEeCCCCCcCC
Confidence 99999999999 55554
No 40
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.95 E-value=5.8e-10 Score=104.23 Aligned_cols=81 Identities=23% Similarity=0.465 Sum_probs=60.5
Q ss_pred CCCCCCCCCC--------CCCCCeeeecCCceeeeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCC
Q psy13144 592 VYTNPCQPSP--------CGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPL 663 (1031)
Q Consensus 592 ~~~~eC~~~~--------C~~~~~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~ 663 (1031)
+|+|+|.++| |.++++|+++.++|+|.|++||+|.. |+..
T Consensus 4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~------C~~~-------------------------- 51 (114)
T 1aut_L 4 VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRF------CQRE-------------------------- 51 (114)
T ss_dssp ----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTT------SCEE--------------------------
T ss_pred eecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCC------cCcC--------------------------
Confidence 4689999888 99999999999999999999999983 5421
Q ss_pred CCCCCcCCcCCCC--CCCCCCceeecCCCCeeecCCCCcCCCCCCCcCccc
Q psy13144 664 ESPPEYVNPCIPS--PCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVM 712 (1031)
Q Consensus 664 ~~~~~dideC~~~--~C~~~g~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~ 712 (1031)
.++++|... +|.+ +|+++.++|+|.|++||+|. .....|.+
T Consensus 52 ----~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~--~~g~~C~~ 94 (114)
T 1aut_L 52 ----VSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLG--DDLLQCHP 94 (114)
T ss_dssp ----CCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEEC--TTSSCEEE
T ss_pred ----CcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeEC--CCCCccCc
Confidence 124577643 4554 99999999999999999976 44444443
No 41
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.91 E-value=5.6e-10 Score=109.02 Aligned_cols=71 Identities=25% Similarity=0.724 Sum_probs=56.6
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCee-eecCC
Q psy13144 37 VYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANC-KVINH 115 (1031)
Q Consensus 37 ~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C-~~~~g 115 (1031)
++||+|.++||.++|+|++..++|+|.|++||+|. .|++. ++|... ++.|.+ +| +++.|
T Consensus 46 ~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~------~C~~~------deC~~~------~~~C~~--~C~~n~~g 105 (146)
T 1x7a_L 46 VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK------NCELD------ATCNIK------NGRCKQ--FCKTGADS 105 (146)
T ss_dssp ----CCSSCSSCTTCEEEECSSCEEEECCSSEEST------TTCEE------CCTTSG------GGSCSS--BCCCCSSS
T ss_pred CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC------cCCCC------ccccCC------CCCCcC--CCCCCCCC
Confidence 58999999999999999999999999999999997 56654 455543 245654 89 99999
Q ss_pred CceeeCCCCCcc
Q psy13144 116 SPICRCKAGFTG 127 (1031)
Q Consensus 116 ~~~C~C~~Gy~G 127 (1031)
+|+|.|++||++
T Consensus 106 ~y~C~C~~Gy~l 117 (146)
T 1x7a_L 106 KVLCSCTTGYRL 117 (146)
T ss_dssp CCCCBCCTTEEE
T ss_pred CEEeEcCCCcEe
Confidence 999999999993
No 42
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.89 E-value=4.2e-10 Score=114.45 Aligned_cols=72 Identities=29% Similarity=0.766 Sum_probs=24.2
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCCC
Q psy13144 37 VYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHS 116 (1031)
Q Consensus 37 ~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~ 116 (1031)
.+||+|.++||.++|+|++..++|+|.|++||+|. .|++.+ .++|... ++.|.+ +|+++.|+
T Consensus 40 ~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~------~Ce~~i----~deC~~~------~~~C~~--~C~n~~gs 101 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK------NCELFT----RKLCSLD------NGDCDQ--FCHEEQNS 101 (195)
T ss_dssp ---------------------------------------------------CCGGGTG------GGGCSS--EEEEETTE
T ss_pred CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceec------cccccc----cccccCC------CCCCCC--EeECCCCC
Confidence 48999999999999999999999999999999997 676532 1466653 245665 99999999
Q ss_pred ceeeCCCCCc
Q psy13144 117 PICRCKAGFT 126 (1031)
Q Consensus 117 ~~C~C~~Gy~ 126 (1031)
|+|.|++||+
T Consensus 102 y~C~C~~Gy~ 111 (195)
T 1nfu_B 102 VVCSCARGYT 111 (195)
T ss_dssp EEEECCTTEE
T ss_pred eEEECCCCce
Confidence 9999999999
No 43
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.88 E-value=9.4e-10 Score=97.38 Aligned_cols=71 Identities=23% Similarity=0.594 Sum_probs=57.3
Q ss_pred CCCCCCCCC--CCCCCeeeecCCceeeeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCCCCcC
Q psy13144 593 YTNPCQPSP--CGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYV 670 (1031)
Q Consensus 593 ~~~eC~~~~--C~~~~~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~~~di 670 (1031)
|||||...| | ++++|+++.++|+|+|++||++.... ..| ++|
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g--~~C---------------------------------~di 45 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKS--KSC---------------------------------EDI 45 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTT--TEE---------------------------------ECC
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCC--CcC---------------------------------CCc
Confidence 589999776 8 78999999999999999999964200 012 369
Q ss_pred CcCCCCCCCCCCceeecCCCCeeecCCCCcCC
Q psy13144 671 NPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGA 702 (1031)
Q Consensus 671 deC~~~~C~~~g~C~~~~g~y~C~C~~Gy~g~ 702 (1031)
|||...+|. ++|+++.|+|+|.|+ ||.|.
T Consensus 46 deC~~~~C~--~~C~n~~g~y~C~C~-g~~G~ 74 (87)
T 1z6c_A 46 DECSENMCA--QLCVNYPGGYTCYCD-GKKGF 74 (87)
T ss_dssp CHHHHSCCS--SEECCCSSSCCEECC-SSSCC
T ss_pred CeeCCCCCC--CEEEccCCCEEEECC-CCcCC
Confidence 999888997 699999999999996 55554
No 44
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.81 E-value=2.7e-09 Score=103.82 Aligned_cols=74 Identities=26% Similarity=0.658 Sum_probs=57.7
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCC-
Q psy13144 37 VYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINH- 115 (1031)
Q Consensus 37 ~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g- 115 (1031)
.+||+|.++||.++|+|++..++|+|.|++||+|. .|++.+ ++|..-++. ++.|.+ +|+++.+
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~------~C~~~~-----~~c~~c~~~---~~~C~~--~C~~~~g~ 108 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR------NCETHK-----DDQLICVNE---NGGCEQ--YCSDHTGT 108 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEEST------TSCEEG-----GGCCSTTTG---GGGCSS--EEECCTTS
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCC------ccccCc-----cccccccCC---CCCccC--EeECCCCC
Confidence 48899999999999999999999999999999997 676531 222211111 134442 8999999
Q ss_pred CceeeCCCCCc
Q psy13144 116 SPICRCKAGFT 126 (1031)
Q Consensus 116 ~~~C~C~~Gy~ 126 (1031)
+|+|.|++||+
T Consensus 109 ~y~C~C~~Gy~ 119 (142)
T 2c4f_L 109 KRSCRCHEGYS 119 (142)
T ss_dssp CCEEECCTTEE
T ss_pred CEEEECCCCce
Confidence 99999999999
No 45
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.80 E-value=1.2e-09 Score=105.16 Aligned_cols=72 Identities=29% Similarity=0.766 Sum_probs=23.8
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCCC
Q psy13144 37 VYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHS 116 (1031)
Q Consensus 37 ~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~ 116 (1031)
.++|+|.++||.++|+|++..++|+|.|++||+|. .|++.+ .++|... ++.|.+ +|+++.++
T Consensus 40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~------~C~~~i----~d~C~~~------~~~C~~--~C~~~~g~ 101 (134)
T 2vh0_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK------NCELFT----RKLCSLD------NGDCDQ--FCHEEQNS 101 (134)
T ss_dssp ---------------------------------------------------CCGGGTG------GGGCSS--EEEEETTE
T ss_pred CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCC------ccccCC----CCccccC------CCCCCC--EeECCCCC
Confidence 48899999999999999999999999999999987 666532 1456543 245654 89999999
Q ss_pred ceeeCCCCCc
Q psy13144 117 PICRCKAGFT 126 (1031)
Q Consensus 117 ~~C~C~~Gy~ 126 (1031)
|+|.|++||+
T Consensus 102 y~C~C~~Gy~ 111 (134)
T 2vh0_B 102 VVCSCARGYT 111 (134)
T ss_dssp EEEECCTTEE
T ss_pred EEEECCCCcE
Confidence 9999999999
No 46
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.79 E-value=3.1e-09 Score=103.38 Aligned_cols=73 Identities=25% Similarity=0.558 Sum_probs=60.1
Q ss_pred CCCCCCCCCCCCCCCeeeecCCceeeeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCCCCcCC
Q psy13144 592 VYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVN 671 (1031)
Q Consensus 592 ~~~~eC~~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~~~did 671 (1031)
+++++|.++||.++++|+++.++|+|.|++||+|. .|+ .+++
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~------~C~--------------------------------~~~~ 86 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR------NCE--------------------------------THKD 86 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEEST------TSC--------------------------------EEGG
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCC------ccc--------------------------------cCcc
Confidence 46899999999999999999999999999999988 354 2355
Q ss_pred cCCCCCCCCCC---ceeecCC-CCeeecCCCCcCC
Q psy13144 672 PCIPSPCGPYS---QCRDIGG-SPSCSCLPNYIGA 702 (1031)
Q Consensus 672 eC~~~~C~~~g---~C~~~~g-~y~C~C~~Gy~g~ 702 (1031)
+|...++.+++ +|+++.+ +|+|.|++||++.
T Consensus 87 ~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~ 121 (142)
T 2c4f_L 87 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLL 121 (142)
T ss_dssp GCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEEC
T ss_pred ccccccCCCCCccCEeECCCCCCEEEECCCCceEC
Confidence 65444555555 8999999 9999999999943
No 47
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.78 E-value=9.6e-10 Score=101.16 Aligned_cols=83 Identities=24% Similarity=0.511 Sum_probs=34.8
Q ss_pred eCCCCCCCCCCCccccccCCCCCCCCCCCC--CCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccC
Q psy13144 16 SCPPGTTGSPFVQCKPIVHEPVYTNPCQPS--PCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQN 93 (1031)
Q Consensus 16 ~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~--~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~ 93 (1031)
.-..||+++. | ++|||... +|. ++|++..++|+|+|++||+|.. ...|+ ++++|..
T Consensus 17 ~~~~~~~~~~---C--------d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~---g~~C~------dideC~~ 74 (107)
T 2w2n_E 17 TTENLYFQGA---M--------GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVA---QRRCE------DIDECQD 74 (107)
T ss_dssp ---CCCCSCC---B--------SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEET---TTEEE------C------
T ss_pred ccCCCcCCCC---C--------cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccC---CCccc------cccccCC
Confidence 3456788774 6 57899753 564 5999999999999999999831 01344 4567764
Q ss_pred CCCCCCCCCCCCCCCeeeecCCCceeeCCCCCccCC
Q psy13144 94 QKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDP 129 (1031)
Q Consensus 94 ~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~ 129 (1031)
+++|. ++|+|+.|+|+|.|++||+|..
T Consensus 75 -------~~~C~--~~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 75 -------PDTCS--QLCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp ------------------------------------
T ss_pred -------CCCcC--CeeecCCCCEEEECCCCceECC
Confidence 25665 6899999999999999999864
No 48
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.75 E-value=1.4e-09 Score=110.54 Aligned_cols=76 Identities=33% Similarity=0.826 Sum_probs=27.0
Q ss_pred CcCCCCCCCCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccC-CCCCCcchhccccccCCCCCCCCCCCeeeecCC
Q psy13144 920 EYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQN-SECPFDKACIREKCIDPCPGSCGYNALCKVINH 998 (1031)
Q Consensus 920 ~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~-~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g 998 (1031)
.++|+|.++||.++++|+++.++|+|.|++||+|. .|+ .++ ++|... ...|.. .|+++.|
T Consensus 40 ~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~--~Ce---~~i~deC~~~------------~~~C~~--~C~n~~g 100 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK--NCE---LFTRKLCSLD------------NGDCDQ--FCHEEQN 100 (195)
T ss_dssp ----------------------------------------------CCGGGTG------------GGGCSS--EEEEETT
T ss_pred CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceec--ccc---ccccccccCC------------CCCCCC--EeECCCC
Confidence 47899999999999999999999999999999987 665 235 778653 124553 9999999
Q ss_pred CceeeCCCCCc----cCCCC
Q psy13144 999 SPICTCPDGFV----GDAFS 1014 (1031)
Q Consensus 999 ~~~C~C~~G~~----G~~c~ 1014 (1031)
+|+|.|++||+ |..|.
T Consensus 101 sy~C~C~~Gy~l~~dG~~C~ 120 (195)
T 1nfu_B 101 SVVCSCARGYTLADNGKACI 120 (195)
T ss_dssp EEEEECCTTEEECTTSSCEE
T ss_pred CeEEECCCCceeCCCCCccc
Confidence 99999999999 66664
No 49
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.74 E-value=1.7e-09 Score=104.19 Aligned_cols=76 Identities=33% Similarity=0.804 Sum_probs=26.4
Q ss_pred CcCCCCCCCCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccC-CCCCCcchhccccccCCCCCCCCCCCeeeecCC
Q psy13144 920 EYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQN-SECPFDKACIREKCIDPCPGSCGYNALCKVINH 998 (1031)
Q Consensus 920 ~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~-~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g 998 (1031)
.++|+|.++||.++++|+++.++|+|.|++||+|. .|+. ++ ++|... ...|.. +|+++.+
T Consensus 40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~--~C~~---~i~d~C~~~------------~~~C~~--~C~~~~g 100 (134)
T 2vh0_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK--NCEL---FTRKLCSLD------------NGDCDQ--FCHEEQN 100 (134)
T ss_dssp ----------------------------------------------CCGGGTG------------GGGCSS--EEEEETT
T ss_pred CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCC--cccc---CCCCccccC------------CCCCCC--EeECCCC
Confidence 47899999999999999999999999999999987 5652 25 777643 123553 9999999
Q ss_pred CceeeCCCCCc----cCCCC
Q psy13144 999 SPICTCPDGFV----GDAFS 1014 (1031)
Q Consensus 999 ~~~C~C~~G~~----G~~c~ 1014 (1031)
+|+|.|++||+ |..|.
T Consensus 101 ~y~C~C~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 101 SVVCSCARGYTLADNGKACI 120 (134)
T ss_dssp EEEEECCTTEEECTTSSCEE
T ss_pred CEEEECCCCcEECCCCCccC
Confidence 99999999999 65554
No 50
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.71 E-value=4.4e-09 Score=96.72 Aligned_cols=71 Identities=23% Similarity=0.644 Sum_probs=29.4
Q ss_pred CccccCCCCCCCCCCCCCCCCeeeecCCCceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCC-CCCCCCCCceec
Q psy13144 88 DKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCY-PSPCGPYSQCRD 166 (1031)
Q Consensus 88 ~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~-~~~C~~~g~C~~ 166 (1031)
+++|+.+ ++.|. ++|+++.++|+|.|++||+|.....|+ +||||+ +.+|. ++|++
T Consensus 29 ~neC~~~------~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~--------------dideC~~~~~C~--~~C~n 84 (107)
T 2w2n_E 29 TNECLDN------NGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE--------------DIDECQDPDTCS--QLCVN 84 (107)
T ss_dssp CCGGGTG------GGGCS--SEEECCSBSCEEECCTTCEEETTTEEE--------------C------------------
T ss_pred CccCcCC------CCCCC--CEeEeCCCCeEEECCCCccccCCCccc--------------cccccCCCCCcC--Ceeec
Confidence 4677753 24564 589999999999999999984333474 788997 47886 79999
Q ss_pred CCCCceeeCCCCCcCC
Q psy13144 167 INGSPSCSCLPSYIGS 182 (1031)
Q Consensus 167 ~~g~~~C~C~~Gy~g~ 182 (1031)
+.++|+|.|++||++.
T Consensus 85 ~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 85 LEGGYKCQCEEGFQLD 100 (107)
T ss_dssp ----------------
T ss_pred CCCCEEEECCCCceEC
Confidence 9999999999999987
No 51
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.65 E-value=2.4e-08 Score=111.21 Aligned_cols=84 Identities=31% Similarity=0.667 Sum_probs=69.1
Q ss_pred CCCCCCCCCCCCCCCeeeecCCceeeeCCCCcccCCCCCcCcCccCCCCCCCCcccCCccCCCCCCCCCCCCCCCCCcCC
Q psy13144 592 VYTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACFNQKCVDPCPDSPPPPLESPPEYVN 671 (1031)
Q Consensus 592 ~~~~eC~~~~C~~~~~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~~~~~~~~~~~did 671 (1031)
+|+|+|.++||.++++|++..++|+|.|++||+|. .|+ .|||
T Consensus 3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~------~C~--------------------------------~~~~ 44 (317)
T 3h5c_B 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGS------NCE--------------------------------LAKN 44 (317)
T ss_dssp ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSS------SSC--------------------------------CCSS
T ss_pred ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCC------ccc--------------------------------cCcc
Confidence 36899999999999999999999999999999988 354 4789
Q ss_pred cCCC---CCCCCCCceeecCCCCeeecCCCCcCCCCCCCcCcccCCCCC
Q psy13144 672 PCIP---SPCGPYSQCRDIGGSPSCSCLPNYIGAPPNCRPECVMNSECP 717 (1031)
Q Consensus 672 eC~~---~~C~~~g~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~ 717 (1031)
||.. .+|.+ +|+++.++|+|.|++||+|. .-...|.++++|.
T Consensus 45 eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~--~~~~~C~~~~~c~ 89 (317)
T 3h5c_B 45 ECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG--EDHKQCVPHDQCA 89 (317)
T ss_dssp SCCTTCTTSCSS--EEECCSSSCEEECCTTEECC--TTSSCCEECSSCC
T ss_pred cCCCCCCCCCcC--ccccCCCeeEEecccccccc--ccccccccccccc
Confidence 9986 78987 99999999999999999997 4345566666553
No 52
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.64 E-value=2.9e-07 Score=113.64 Aligned_cols=165 Identities=21% Similarity=0.469 Sum_probs=98.7
Q ss_pred ecCCCCccCCcccCCCCCcCC-CCCCCCCccccCCCCCceeee----cCCCCcCCCCCCCCCcccCCCCCCcccccCCcc
Q psy13144 795 VCLPDYYGDGYVSCGPECILN-NDCPSNKACIRNKFNKQAVCS----CLPNYFGSPPACRPECTVNTDCPLDKACVNQKC 869 (1031)
Q Consensus 795 ~C~~G~~G~~c~~~~~~C~~~-~~C~~~g~C~~~~~~~~~~C~----C~~G~~g~g~~C~~~C~~~~~C~~~~~C~~~~C 869 (1031)
.|..|+-...|. ..+|... ..|. ++.|++ .+++|. |..|+... .|.....|... .
T Consensus 200 dC~dgsDE~~C~--~~~C~~~~f~C~-~g~Ci~----~~~~Cdg~~dC~dgsde~------~C~~~~~C~~~-----~-- 259 (699)
T 1n7d_A 200 DCKDKSDEENCA--VATCRPDEFQCS-DGNCIH----GSRQCDREYDCKDMSDEV------GCVNVTLCEGP-----N-- 259 (699)
T ss_dssp CSTTSCSSCSCC--CCCCCSSEEESS-SSCEEE----TTCCSSSCCCSSSSCSSS------STTCCCCCCST-----T--
T ss_pred CCCCCcccccCC--CcccCCCcEecC-CCceee----eecccCCCCCCCCCCccC------CCCCCCcccCC-----C--
Confidence 455555444443 2345432 3565 357876 356665 66665544 33322222100 0
Q ss_pred cCCCCCCCCCCCceeecCC--CeeeEeCCCCccCCCccccCCCCCCCCCCCCCcCCCCCCC--CCCCCCceeecCCCcee
Q psy13144 870 VDPCPGSCGQNANCRVINH--NAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPS--PCGPNSQCRDINGSPSC 945 (1031)
Q Consensus 870 ~~~C~~~C~~~~~C~~~~g--~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~~~--~C~~~~~C~~~~g~~~C 945 (1031)
.-.|.+ +.|++... .+.+.|+.|+.+.. ..| +++||..+ +|. ++|+++.++|+|
T Consensus 260 ----~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~-~~C--------------~~~eC~~~~~~C~--~~C~~~~~~~~C 317 (699)
T 1n7d_A 260 ----KFKCHS-GECITLDKVCNMARDCRDWSDEPI-KEC--------------GTNECLDNNGGCS--HVCNDLKIGYEC 317 (699)
T ss_dssp ----CCCCTT-SCCCCSSCCSCSSCCSSSSCSCCC-SSC--------------CCCCTTSSTTTSC--TTCCCCTTCCCC
T ss_pred ----ceecCC-CcEeCCcccccccceecCcccccc-ccc--------------ccccccccccCcC--CCcccCCCCcEE
Confidence 123432 45554322 24667777765542 124 46888654 454 689999999999
Q ss_pred eCCCCCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCCCceeeCCCCCccCCC-CCCcCC
Q psy13144 946 SCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAF-SGCYPK 1019 (1031)
Q Consensus 946 ~C~~Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c-~~c~~~ 1019 (1031)
.|++||++.. ...|.+++||... +.|. ++|+++.|+|+|.|++||+++.- ..|+..
T Consensus 318 ~C~~G~~~~~---~~~C~dideC~~~-------------~~C~--~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~ 374 (699)
T 1n7d_A 318 LCPDGFQLVA---QRRCEDIDECQDP-------------DTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAV 374 (699)
T ss_dssp CCCSSSCCCS---SSCCCCCCCCSSS-------------SSCT--TTCCBCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred eCCCCeEcCC---CCcccCccccCCC-------------Cccc--cccccCCCCeeeeeecccccCCCCCccccc
Confidence 9999999731 2356799999742 2353 58999999999999999997542 236543
No 53
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.61 E-value=2.1e-08 Score=99.62 Aligned_cols=125 Identities=32% Similarity=0.815 Sum_probs=80.3
Q ss_pred CCCCCCeecccC--Cceee-eCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCCCceeeCC
Q psy13144 46 PCGPNSQCREVN--HQAVC-SCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCK 122 (1031)
Q Consensus 46 ~C~~~g~C~~~~--g~~~C-~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~ 122 (1031)
||.++++|+... +.++| .|++||+|. .|+. |+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~------~Ce~---------------------------------------C~ 36 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGK------RCEL---------------------------------------CD 36 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEEST------TSCE---------------------------------------EC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCC------CCcC---------------------------------------CC
Confidence 678889998765 57899 799999987 3331 55
Q ss_pred CCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCC------CceecCCCCceee-CCCCCcCCCCCCcccCCCCCC
Q psy13144 123 AGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPY------SQCRDINGSPSCS-CLPSYIGSPPNCRPECIQNSE 195 (1031)
Q Consensus 123 ~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~------g~C~~~~g~~~C~-C~~Gy~g~~~~C~~~C~~~~~ 195 (1031)
+||.|+... .+ .....|.+-.|.++ ++|... +.+|. |+++|+|. .|+
T Consensus 37 ~g~~g~~~~---~~-----------~~~~~C~~C~C~~~~~~~~~~~C~~~--tG~C~~C~~g~~G~--~Ce-------- 90 (162)
T 1klo_A 37 DGYFGDPLG---SN-----------GPVRLCRPCQCNDNIDPNAVGNCNRL--TGECLKCIYNTAGF--YCD-------- 90 (162)
T ss_dssp TTEEEETTC---TT-----------SSCEEEEECCSTTCBCTTCSCCBCTT--TCCBCCBCTTEETT--TTC--------
T ss_pred CCCcCCccc---cc-----------CCCCCCeeCcCCCCCCcccCCcccCC--CCcccCCCCCCcCC--CcC--------
Confidence 566654311 00 01123333344443 456433 34794 99999999 776
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCCCCCC------cccccCCCeeeecCCCCcCC
Q psy13144 196 CPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYTNPCQPSPCGPNS------QCREVNHQAVCSCLPNYFGS 269 (1031)
Q Consensus 196 C~~~~~C~n~~~~~~C~~~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g------~C~~~~g~y~C~C~~Gy~g~ 269 (1031)
+|++||.|.. +.. ...+.|.+-+|.+.| +|.... .+|.|++||+|.
T Consensus 91 ------------------~C~~Gy~g~~---~~~-----~~~~~C~~C~C~~~Gs~~~~~~Cd~~t--G~C~C~~g~~G~ 142 (162)
T 1klo_A 91 ------------------RCKEGFFGNP---LAP-----NPADKCKACACNPYGTVQQQSSCNPVT--GQCQCLPHVSGR 142 (162)
T ss_dssp ------------------EECTTEEECT---TCS-----SGGGSEEECCCCTTTBGGGCCCCCTTT--CCCCBCTTEEST
T ss_pred ------------------cCchhhcCCc---ccc-----CCCCCCeeccCCCCCccCCCCCCCCCC--CEeECCCCCcCC
Confidence 7899999984 321 123446666677654 676544 479999999998
No 54
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.57 E-value=5.2e-08 Score=108.51 Aligned_cols=78 Identities=26% Similarity=0.641 Sum_probs=66.9
Q ss_pred CCCCCCCCceeecCCCeeeEeCCCCccCCCccccCCCCCCCCCCCCCcCCCCCC---CCCCCCCceeecCCCceeeCCCC
Q psy13144 874 PGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIP---SPCGPNSQCRDINGSPSCSCLPT 950 (1031)
Q Consensus 874 ~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~~---~~C~~~~~C~~~~g~~~C~C~~G 950 (1031)
+++|.++++|++..++|+|.|++||+|. .|+ .+++||.. +||.+ +|+++.++|+|.|++|
T Consensus 10 ~~pC~~~g~C~~~~~~~~C~C~~g~~g~---~C~------------~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g 72 (317)
T 3h5c_B 10 SQPCLHNGSCQDSIWGYTCTCSPGYEGS---NCE------------LAKNECHPERTDGCQH--FCLPGQESYTCSCAQG 72 (317)
T ss_dssp SCCCTTTCCCCCCSSSCCCCCSSSCCSS---SSC------------CCSSSCCTTCTTSCSS--EEECCSSSCEEECCTT
T ss_pred CCCCCCCCEeECCCCCeEEECCCCCcCC---ccc------------cCcccCCCCCCCCCcC--ccccCCCeeEEecccc
Confidence 3578999999999999999999999998 796 57899986 79987 8999999999999999
Q ss_pred CcCCCCCCCCCcccCCCCCC
Q psy13144 951 FIGAPPNCRPECIQNSECPF 970 (1031)
Q Consensus 951 y~g~~~~C~~~C~~~~eC~~ 970 (1031)
|+|.. -...|.++++|.-
T Consensus 73 ~~~~~--~~~~C~~~~~c~c 90 (317)
T 3h5c_B 73 YRLGE--DHKQCVPHDQCAC 90 (317)
T ss_dssp EECCT--TSSCCEECSSCCC
T ss_pred ccccc--ccccccccccccc
Confidence 99973 2456777787753
No 55
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.56 E-value=7.8e-08 Score=95.51 Aligned_cols=74 Identities=31% Similarity=0.689 Sum_probs=48.6
Q ss_pred CCCCCCeeeccC--CCcee-eCCCCcccCCCCCCCCCCCCCCCCCccCCCCCCCCCCeeeCceeecCCCCccCCccc--C
Q psy13144 734 SCGYNAECKIIN--HTPIC-TCPDGFIGDPFTSCSPKPPEPVQPVIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVS--C 808 (1031)
Q Consensus 734 ~C~~~~~C~~~~--g~~~C-~C~~G~~g~~~~~C~~~~~~~~~~~~~~~~c~C~~~~~C~~~~C~C~~G~~G~~c~~--~ 808 (1031)
+|.++++|+... +.++| .|++||+|. .|+ .|.+||+|+.... .
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~---~Ce-----------------------------~C~~g~~g~~~~~~~~ 49 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGK---RCE-----------------------------LCDDGYFGDPLGSNGP 49 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEEST---TSC-----------------------------EECTTEEEETTCTTSS
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCC---CCc-----------------------------CCCCCCcCCcccccCC
Confidence 477789998765 67899 799999999 565 2677888765431 1
Q ss_pred CCCCcCCCCCCCC------CccccCCCCCceeee-cCCCCcCC
Q psy13144 809 GPECILNNDCPSN------KACIRNKFNKQAVCS-CLPNYFGS 844 (1031)
Q Consensus 809 ~~~C~~~~~C~~~------g~C~~~~~~~~~~C~-C~~G~~g~ 844 (1031)
...|.. -.|.++ ++|.. .+++|+ |+++|+|.
T Consensus 50 ~~~C~~-C~C~~~~~~~~~~~C~~----~tG~C~~C~~g~~G~ 87 (162)
T 1klo_A 50 VRLCRP-CQCNDNIDPNAVGNCNR----LTGECLKCIYNTAGF 87 (162)
T ss_dssp CEEEEE-CCSTTCBCTTCSCCBCT----TTCCBCCBCTTEETT
T ss_pred CCCCee-CcCCCCCCcccCCcccC----CCCcccCCCCCCcCC
Confidence 123321 234443 45653 356884 99999888
No 56
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.51 E-value=1.2e-07 Score=117.74 Aligned_cols=137 Identities=22% Similarity=0.440 Sum_probs=79.7
Q ss_pred ecCCCCccCCcccCCCCCcC--CCCCCCCCccccCCCCCceeeecCCCCcCCCCCCCCCcccCCCCCCcccccCCcccCC
Q psy13144 795 VCLPDYYGDGYVSCGPECIL--NNDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDP 872 (1031)
Q Consensus 795 ~C~~G~~G~~c~~~~~~C~~--~~~C~~~g~C~~~~~~~~~~C~C~~G~~g~g~~C~~~C~~~~~C~~~~~C~~~~C~~~ 872 (1031)
.|..|+.+..|. .+.+|.. ..+|.+ |.|++....-.+.+.|..|+......| .. ++|...
T Consensus 257 dC~dgsDE~~C~-~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C----~~-------~~C~~~----- 318 (791)
T 3m0c_C 257 DCKDMSDEVGCV-NVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKEC----GT-------NECLDN----- 318 (791)
T ss_dssp -----------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCTTB----SC-------CSTTTG-----
T ss_pred ccccccccCccc-ccccccCCCccccCC-CcccccccccCCccccccccCcccccc----cc-------cccccc-----
Confidence 466666665553 2344532 246765 688875422345667888776552222 11 123322
Q ss_pred CCCCCCCCCceeecCCCeeeEeCCCCccCCCccccCCCCCCCCCCCCCcCCCCC-CCCCCCCCceeecCCCceeeCCCCC
Q psy13144 873 CPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCI-PSPCGPNSQCRDINGSPSCSCLPTF 951 (1031)
Q Consensus 873 C~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~Gy 951 (1031)
.+.|. ++|+++.++|+|.|++||++.....|+ +||||. +.+|. ++|+|+.|+|+|.|++||
T Consensus 319 -~~~C~--~~C~~~~~~y~C~C~~Gy~l~~g~~C~-------------dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy 380 (791)
T 3m0c_C 319 -NGGCS--HVCNDLKIGYECLCPDGFQLVAQRRCE-------------DIDECQDPDTCS--QLCVNLEGGYKCQCEEGF 380 (791)
T ss_dssp -GGGCS--SEEEECSBSEEEECCTTCEEETTTEEE-------------CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSE
T ss_pred -ccCcc--ccccCCCCCcccCCCCCCccCCCCccc-------------cCcccCCCCCCC--CeeecCCCCceeecCCCC
Confidence 12343 489999999999999999853223685 689997 34664 589999999999999999
Q ss_pred cCCCCCCCCCcccCCCCC
Q psy13144 952 IGAPPNCRPECIQNSECP 969 (1031)
Q Consensus 952 ~g~~~~C~~~C~~~~eC~ 969 (1031)
++.+. ...|.+++++.
T Consensus 381 ~l~~~--~~~C~~~~~~p 396 (791)
T 3m0c_C 381 QLDPH--TKACKAVGSIA 396 (791)
T ss_dssp ECCSS--CCCCEETTSCC
T ss_pred EeCCC--Cceeeeccccc
Confidence 98642 34566666654
No 57
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.49 E-value=8.5e-08 Score=119.11 Aligned_cols=110 Identities=23% Similarity=0.527 Sum_probs=71.6
Q ss_pred CCCCCCceeecCC--CeeeEeCCCCccCCCccccCCCCCCCCCCCCCcCCCCCCCCCCCCCceeecCCCceeeCCCCCcC
Q psy13144 876 SCGQNANCRVINH--NAVCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIG 953 (1031)
Q Consensus 876 ~C~~~~~C~~~~g--~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g 953 (1031)
.|.+ +.|++... .+.+.|+.|+.... ..| ++++|..++..-.++|+++.++|+|.|++||++
T Consensus 280 ~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~-~~C--------------~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l 343 (791)
T 3m0c_C 280 KCHS-GECITLDKVCNMARDCRDWSDEPI-KEC--------------GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL 343 (791)
T ss_dssp CCTT-SCCCCSSCCSCSSCCSSSSCSCCC-TTB--------------SCCSTTTGGGGCSSEEEECSBSEEEECCTTCEE
T ss_pred ccCC-CcccccccccCCccccccccCccc-ccc--------------ccccccccccCccccccCCCCCcccCCCCCCcc
Confidence 3443 45655432 23567777775542 124 256665433222358999999999999999986
Q ss_pred CCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCCCceeeCCCCCccCCC-CCCcCC
Q psy13144 954 APPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAF-SGCYPK 1019 (1031)
Q Consensus 954 ~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c-~~c~~~ 1019 (1031)
.. ...|.+++||... ..|. ++|+++.|+|+|.|++||.++.- ..|+..
T Consensus 344 ~~---g~~C~dideC~~~-------------~~C~--~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~ 392 (791)
T 3m0c_C 344 VA---QRRCEDIDECQDP-------------DTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAV 392 (791)
T ss_dssp ET---TTEEECCCCCSSS-------------SSCT--TTCCBCSSCBCCCCCSSEECCSSCCCCEET
T ss_pred CC---CCccccCcccCCC-------------CCCC--CeeecCCCCceeecCCCCEeCCCCceeeec
Confidence 21 1457799999732 2343 58999999999999999987432 236543
No 58
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.49 E-value=6.9e-07 Score=110.25 Aligned_cols=98 Identities=21% Similarity=0.547 Sum_probs=72.9
Q ss_pred CCCCCCeeeecCC--CceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCC--CCCCCceecCCCCceeeCCCC
Q psy13144 103 TCGQNANCKVINH--SPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSP--CGPYSQCRDINGSPSCSCLPS 178 (1031)
Q Consensus 103 ~C~~~~~C~~~~g--~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~--C~~~g~C~~~~g~~~C~C~~G 178 (1031)
.|.+ +.|++... .+.+.|..|+.+.... | +++||+..+ |. ++|+++.++|+|.|++|
T Consensus 262 ~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~-C---------------~~~eC~~~~~~C~--~~C~~~~~~~~C~C~~G 322 (699)
T 1n7d_A 262 KCHS-GECITLDKVCNMARDCRDWSDEPIKE-C---------------GTNECLDNNGGCS--HVCNDLKIGYECLCPDG 322 (699)
T ss_dssp CCTT-SCCCCSSCCSCSSCCSSSSCSCCCSS-C---------------CCCCTTSSTTTSC--TTCCCCTTCCCCCCCSS
T ss_pred ecCC-CcEeCCcccccccceecCcccccccc-c---------------ccccccccccCcC--CCcccCCCCcEEeCCCC
Confidence 3443 56665432 3567788887655322 3 478887543 54 68999999999999999
Q ss_pred CcCC-CCCCc--ccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCC
Q psy13144 179 YIGS-PPNCR--PECIQNSECPYDKACINEKCADPCPGFCPPGTTGSP 223 (1031)
Q Consensus 179 y~g~-~~~C~--~~C~~~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~~ 223 (1031)
|++. ++.|+ +||.....|+ ++|+|+.++|+| .|++||++..
T Consensus 323 ~~~~~~~~C~dideC~~~~~C~--~~C~n~~g~y~C--~C~~G~~~~~ 366 (699)
T 1n7d_A 323 FQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKC--QCEEGFQLDP 366 (699)
T ss_dssp SCCCSSSCCCCCCCCSSSSSCT--TTCCBCSSCBCC--CCCSSCBCCS
T ss_pred eEcCCCCcccCccccCCCCccc--cccccCCCCeee--eeecccccCC
Confidence 9952 34887 7887667785 699999999999 9999999874
No 59
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.26 E-value=4.5e-07 Score=93.93 Aligned_cols=107 Identities=21% Similarity=0.462 Sum_probs=77.4
Q ss_pred CCCCCCeeccceeecCCCcccCCCCcCCCCCcCCCCCCCCcccccCcccCCCCCCCCCCCCeeeecCCceEeeCCCC---
Q psy13144 364 NCAPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNNDCPSNKACIKYKCKNPCVSGTCGEGAICDVINHAVSCNCPAG--- 440 (1031)
Q Consensus 364 ~C~~~g~C~~~~C~C~~G~~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~~~C~C~~G--- 440 (1031)
.|.++|+|+.++|+|.+||+|..|+....... . .+....|.......+|.++|+|+. .+|.|.+|
T Consensus 97 ~Csg~G~C~~g~C~C~~G~~G~~Cec~~~~~~--~------~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~ 164 (217)
T 2p28_B 97 LCHGKGFLECGICRCDTGYIGKNCECQTQGRS--S------QELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVP 164 (217)
T ss_dssp TTTTSEEEETTEEEECTTEESTTSCEECCCCC---------GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCST
T ss_pred ccCCCceEECCEEECCCCccCCcccccCcccc--c------ccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCC
Confidence 58999999999999999999999863221110 0 011122333334567999999984 28999999
Q ss_pred ---CccCCCccccccCCCCCCCCCCCCC---CCCCC--CcccccCCceeeecCCCccCCCCCCcCcCcc
Q psy13144 441 ---TTGNPFVLCKPVQNEPVYTNPCHPS---PCGPN--SQCREVNHQAVCSCLPNYFGSPPACRPECTV 501 (1031)
Q Consensus 441 ---y~G~~~~~C~~~~~~~~~~~~C~~~---~C~~~--g~C~~~~g~~~C~C~~Gy~G~~~~C~~~C~~ 501 (1031)
|+|. .|+ .+++.|... +|.++ |+|+. .+|.|.+||+|. .|+.
T Consensus 165 ~~~~~G~---~Ce------~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~------~C~~ 214 (217)
T 2p28_B 165 GKLIYGQ---YCE------CDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGS------ACQH 214 (217)
T ss_dssp TCCEEST---TSC------EESSCSCEETTEETTCTTTEEEET----TEEEECTTEEST------TSCE
T ss_pred cccEECC---Ccc------cCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccC------CcCC
Confidence 5888 786 345677654 79887 99995 389999999999 7764
No 60
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.25 E-value=8.1e-07 Score=65.34 Aligned_cols=34 Identities=21% Similarity=0.567 Sum_probs=32.6
Q ss_pred CCCCCCCCCCCCCCeecccCCceeeeCCCCCcCC
Q psy13144 38 YTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 38 ~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~ 71 (1031)
++|+|.++||.++|+|++..++|+|.|++||+|.
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~ 35 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK 35 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCC
Confidence 6899999999999999999999999999999997
No 61
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.25 E-value=6.3e-07 Score=92.84 Aligned_cols=96 Identities=26% Similarity=0.654 Sum_probs=71.2
Q ss_pred CCCCCeeeCceeecCCCCccCCcccCCC---------CCcC---CCCCCCCCccccCCCCCceeeecCCC------CcCC
Q psy13144 783 CVPNAECRDGVCVCLPDYYGDGYVSCGP---------ECIL---NNDCPSNKACIRNKFNKQAVCSCLPN------YFGS 844 (1031)
Q Consensus 783 C~~~~~C~~~~C~C~~G~~G~~c~~~~~---------~C~~---~~~C~~~g~C~~~~~~~~~~C~C~~G------~~g~ 844 (1031)
|+++|+|+.++|+|.+||+|..|+.... .|.. ..+|.++|+|+.. +|+|++| |+|.
T Consensus 98 Csg~G~C~~g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g------~C~C~~gw~~~~~~~G~ 171 (217)
T 2p28_B 98 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG------QCLCHTSDVPGKLIYGQ 171 (217)
T ss_dssp TTTSEEEETTEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETT------EEEECCCCSTTCCEEST
T ss_pred cCCCceEECCEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCC------ceECCCCCCCcccEECC
Confidence 7889999999999999999999985432 4653 2579999999952 7999999 5777
Q ss_pred CCCCCCCcccCCCCCCcccccCCcccCCCCCCCCCC--CceeecCCCeeeEeCCCCccCCCcccc
Q psy13144 845 PPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQN--ANCRVINHNAVCNCKPGFTGEPRIRCS 907 (1031)
Q Consensus 845 g~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~--~~C~~~~g~~~C~C~~Gy~G~~~~~C~ 907 (1031)
.|+.... .|... + ..+|.++ |+|+. .+|.|.+||+|. .|+
T Consensus 172 ------~Ce~~~~-----~C~~~---~--g~~C~~~~~G~C~~----g~C~C~~G~~G~---~C~ 213 (217)
T 2p28_B 172 ------YCECDTI-----NCERY---N--GQVCGGPGRGLCFC----GKCRCHPGFEGS---ACQ 213 (217)
T ss_dssp ------TSCEESS-----CSCEE---T--TEETTCTTTEEEET----TEEEECTTEEST---TSC
T ss_pred ------CcccCCc-----cCCCC---C--CCCCCCCCCcEEeC----CeeECCCCCccC---CcC
Confidence 6653211 23211 0 1257777 99985 399999999999 686
No 62
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.18 E-value=1e-06 Score=64.82 Aligned_cols=37 Identities=30% Similarity=0.625 Sum_probs=34.4
Q ss_pred CCCCCCCCCCCCCCceecCCCCceeeCCCCCcCCCCCCc
Q psy13144 149 PVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 149 ~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
++|+|+++||.++|+|++..++|+|.|++||+|. .|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~--~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK--NCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST--TSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCC--ccC
Confidence 6889999999999999999999999999999998 765
No 63
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.16 E-value=8.2e-07 Score=102.18 Aligned_cols=72 Identities=28% Similarity=0.623 Sum_probs=56.9
Q ss_pred CCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCCCcee
Q psy13144 40 NPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPIC 119 (1031)
Q Consensus 40 d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C 119 (1031)
|||..+++.+.++|++..++|+|.|++||++.. ...|+ ++++|+. ++.|.+ +|+|+.|+|+|
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~---~~~C~------dideC~~-------~~~C~~--~C~n~~g~~~C 62 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA---QRRCE------DIDECQD-------PDTCSQ--LCVNLEGGYKC 62 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECS---SSCEE------ECCCCST-------TSSCSS--CCBCCSSSCBC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCC---CCccc------Cchhhhc-------cCCCCC--ccCCCccceee
Confidence 578888887788999999999999999999631 01444 4567764 256654 89999999999
Q ss_pred eCCCCCccCC
Q psy13144 120 RCKAGFTGDP 129 (1031)
Q Consensus 120 ~C~~Gy~G~~ 129 (1031)
.|.+||++..
T Consensus 63 ~C~~g~~~~~ 72 (400)
T 3p5b_L 63 QCEEGFQLDP 72 (400)
T ss_dssp CCCTTCCCCT
T ss_pred eccccccccc
Confidence 9999999864
No 64
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.15 E-value=8.3e-07 Score=70.11 Aligned_cols=38 Identities=18% Similarity=0.383 Sum_probs=33.6
Q ss_pred CcCCCCCCCCCCCCCce-----eecCCCceeeCCCCCcCCCCCCC
Q psy13144 920 EYVNPCIPSPCGPNSQC-----RDINGSPSCSCLPTFIGAPPNCR 959 (1031)
Q Consensus 920 ~~~~~C~~~~C~~~~~C-----~~~~g~~~C~C~~Gy~g~~~~C~ 959 (1031)
+++|||.++||+|+|+| ++..++|+|.|++||+|. +|+
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~--~CE 48 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD--RCQ 48 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEEST--TSC
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC--CcC
Confidence 68999999999999999 567889999999999999 787
No 65
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.13 E-value=1.7e-06 Score=99.41 Aligned_cols=79 Identities=25% Similarity=0.566 Sum_probs=61.8
Q ss_pred CCCCCCCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCCCcee
Q psy13144 923 NPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSPIC 1002 (1031)
Q Consensus 923 ~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C 1002 (1031)
|||..+|+..+++|++++++|+|.|++||++.. ...|.++|||... ++|.. .|+++.|+|+|
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~---~~~C~dideC~~~-------------~~C~~--~C~n~~g~~~C 62 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA---QRRCEDIDECQDP-------------DTCSQ--LCVNLEGGYKC 62 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECS---SSCEEECCCCSTT-------------SSCSS--CCBCCSSSCBC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCC---CCcccCchhhhcc-------------CCCCC--ccCCCccceee
Confidence 578877887778999999999999999999631 2357799999742 24543 89999999999
Q ss_pred eCCCCCccCCC-CCCcCC
Q psy13144 1003 TCPDGFVGDAF-SGCYPK 1019 (1031)
Q Consensus 1003 ~C~~G~~G~~c-~~c~~~ 1019 (1031)
.|++||+++.- ..|+..
T Consensus 63 ~C~~g~~~~~~~~~C~~~ 80 (400)
T 3p5b_L 63 QCEEGFQLDPHTKACKAV 80 (400)
T ss_dssp CCCTTCCCCTTTSSCCCS
T ss_pred eccccccccccccceeec
Confidence 99999997643 246554
No 66
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.10 E-value=1.2e-06 Score=69.24 Aligned_cols=38 Identities=16% Similarity=0.350 Sum_probs=33.7
Q ss_pred CCCCCCCCCCCCCCCce-----ecCCCCceeeCCCCCcCCCCCCc
Q psy13144 148 EPVNPCYPSPCGPYSQC-----RDINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 148 ~~~d~C~~~~C~~~g~C-----~~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
+++|||+++||+++|+| ++..++|+|.|++||+|. .||
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~--~CE 48 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD--RCQ 48 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEEST--TSC
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC--CcC
Confidence 68999999999999999 567789999999999999 887
No 67
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.07 E-value=6.5e-07 Score=102.54 Aligned_cols=74 Identities=22% Similarity=0.512 Sum_probs=15.8
Q ss_pred CCCCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCCCc
Q psy13144 38 YTNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSP 117 (1031)
Q Consensus 38 ~~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~ 117 (1031)
++|+|..+++...++|++..|+|+|.|++||++.+ ++..|.++++|.. ++.|.+ .|+|+.|+|
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~--------~~~~C~d~~eC~~-------~~~C~~--~C~~~~g~~ 64 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTE--------DGRTCQDVNECAE-------EGYCSQ--GCTNSEGAF 64 (386)
T ss_dssp -----------------------------------------------------------------CCTT--EEC-----C
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECC--------CCCccCccceeCC-------cCcccC--cCCCCCCCC
Confidence 68999988766666999999999999999999652 3344556678863 256765 499999999
Q ss_pred eeeCCCCCccC
Q psy13144 118 ICRCKAGFTGD 128 (1031)
Q Consensus 118 ~C~C~~Gy~G~ 128 (1031)
+|.|.+||+..
T Consensus 65 ~C~C~~g~~l~ 75 (386)
T 3v65_B 65 QCWCEAGYELR 75 (386)
T ss_dssp CEECCTTEEEC
T ss_pred eEEECCCceEc
Confidence 99999999854
No 68
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.95 E-value=1.7e-06 Score=99.01 Aligned_cols=72 Identities=22% Similarity=0.494 Sum_probs=14.1
Q ss_pred cCCCCCCCCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecCCCc
Q psy13144 921 YVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVINHSP 1000 (1031)
Q Consensus 921 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~ 1000 (1031)
|+|||..+++...++|++..|+|+|.|++||++.+. ...|.+++||... ++|.. .|+++.|+|
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~--~~~C~d~~eC~~~-------------~~C~~--~C~~~~g~~ 64 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTED--GRTCQDVNECAEE-------------GYCSQ--GCTNSEGAF 64 (386)
T ss_dssp -----------------------------------------------------------------CCTT--EEC-----C
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCC--CCccCccceeCCc-------------CcccC--cCCCCCCCC
Confidence 689998877655568999999999999999995421 2456789999632 24553 499999999
Q ss_pred eeeCCCCCc
Q psy13144 1001 ICTCPDGFV 1009 (1031)
Q Consensus 1001 ~C~C~~G~~ 1009 (1031)
+|.|++||+
T Consensus 65 ~C~C~~g~~ 73 (386)
T 3v65_B 65 QCWCEAGYE 73 (386)
T ss_dssp CEECCTTEE
T ss_pred eEEECCCce
Confidence 999999998
No 69
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.91 E-value=1e-06 Score=71.21 Aligned_cols=35 Identities=31% Similarity=0.839 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCCCC--CeecccCCceeeeCCCCCc-CC
Q psy13144 37 VYTNPCQPSPCGPN--SQCREVNHQAVCSCLPNYF-GS 71 (1031)
Q Consensus 37 ~~~d~C~~~~C~~~--g~C~~~~g~~~C~C~~Gy~-g~ 71 (1031)
.++|+|.++||.++ |+|++..++|+|+|++||+ |.
T Consensus 9 ~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~ 46 (61)
T 2k2s_B 9 ETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISL 46 (61)
T ss_dssp TSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEE
T ss_pred CCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCC
Confidence 37899999999998 8999999999999999999 87
No 70
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.80 E-value=1.5e-05 Score=62.81 Aligned_cols=39 Identities=26% Similarity=0.561 Sum_probs=34.3
Q ss_pred CCCCCCCC---CCCCCCeec--ccCCceeeeCCCCCcCCCCCCCCCCccC
Q psy13144 38 YTNPCQPS---PCGPNSQCR--EVNHQAVCSCLPNYFGSPPACRPECTVN 82 (1031)
Q Consensus 38 ~~d~C~~~---~C~~~g~C~--~~~g~~~C~C~~Gy~g~~~~c~~~C~~~ 82 (1031)
+||+|.++ ||.++|+|+ +..++|+|.|++||+|. +|+..
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~------~Ce~~ 45 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD------RCQTR 45 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS------SSCCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC------cCCcc
Confidence 57899886 999999999 78899999999999998 67653
No 71
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.78 E-value=3e-06 Score=68.49 Aligned_cols=38 Identities=26% Similarity=0.719 Sum_probs=34.5
Q ss_pred CcCCCCCCCCCCCC--CceeecCCCceeeCCCCCc-CCCCCCC
Q psy13144 920 EYVNPCIPSPCGPN--SQCRDINGSPSCSCLPTFI-GAPPNCR 959 (1031)
Q Consensus 920 ~~~~~C~~~~C~~~--~~C~~~~g~~~C~C~~Gy~-g~~~~C~ 959 (1031)
.++|+|.++||.++ ++|+++.++|+|.|++||+ |. +|+
T Consensus 9 ~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~--~C~ 49 (61)
T 2k2s_B 9 ETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISL--DGT 49 (61)
T ss_dssp TSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEE--CSS
T ss_pred CCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCC--CCC
Confidence 46899999999999 7999999999999999999 98 665
No 72
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.75 E-value=1.5e-05 Score=62.76 Aligned_cols=37 Identities=24% Similarity=0.556 Sum_probs=33.6
Q ss_pred cCCCCCCC---CCCCCCcee--ecCCCceeeCCCCCcCCCCCCC
Q psy13144 921 YVNPCIPS---PCGPNSQCR--DINGSPSCSCLPTFIGAPPNCR 959 (1031)
Q Consensus 921 ~~~~C~~~---~C~~~~~C~--~~~g~~~C~C~~Gy~g~~~~C~ 959 (1031)
+|++|.++ ||.++++|+ +..++|+|.|++||+|. +|+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~--~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD--RCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS--SSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC--cCC
Confidence 57899876 999999999 78999999999999998 776
No 73
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.63 E-value=3.4e-05 Score=58.50 Aligned_cols=34 Identities=21% Similarity=0.415 Sum_probs=29.9
Q ss_pred CCCCC---CCCCCCcee--ecCCCceeeCCCCCcCCCCCCC
Q psy13144 924 PCIPS---PCGPNSQCR--DINGSPSCSCLPTFIGAPPNCR 959 (1031)
Q Consensus 924 ~C~~~---~C~~~~~C~--~~~g~~~C~C~~Gy~g~~~~C~ 959 (1031)
+|.++ ||.++++|+ +..++|+|.|++||+|. +|+
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~--~Ce 40 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGD--RCQ 40 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETT--TTC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCC--cCC
Confidence 56666 999999998 67899999999999998 776
No 74
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.56 E-value=5e-05 Score=57.56 Aligned_cols=35 Identities=23% Similarity=0.445 Sum_probs=30.3
Q ss_pred CCCCC---CCCCCCeec--ccCCceeeeCCCCCcCCCCCCCCCCcc
Q psy13144 41 PCQPS---PCGPNSQCR--EVNHQAVCSCLPNYFGSPPACRPECTV 81 (1031)
Q Consensus 41 ~C~~~---~C~~~g~C~--~~~g~~~C~C~~Gy~g~~~~c~~~C~~ 81 (1031)
+|.++ ||.++|+|+ +..++|+|+|++||+|. +|+.
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~------~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGD------RCQT 41 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETT------TTCE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCC------cCCc
Confidence 57666 999999998 67889999999999998 6764
No 75
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.53 E-value=4e-05 Score=58.27 Aligned_cols=33 Identities=27% Similarity=0.534 Sum_probs=29.1
Q ss_pred CCCCCCC---CCCCCCCeecccC--CceeeeCCCCCcCC
Q psy13144 38 YTNPCQP---SPCGPNSQCREVN--HQAVCSCLPNYFGS 71 (1031)
Q Consensus 38 ~~d~C~~---~~C~~~g~C~~~~--g~~~C~C~~Gy~g~ 71 (1031)
+|++|.+ +||.+ |+|+... ++|+|+|++||+|.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~ 39 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGV 39 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSST
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccC
Confidence 5788987 99999 8999754 68999999999998
No 76
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.42 E-value=3.6e-05 Score=63.08 Aligned_cols=44 Identities=20% Similarity=0.298 Sum_probs=36.7
Q ss_pred CCCCCCCCCCCCCceee-----cCCCceeeCCCCCcCCCCCCCCCcccCCCCCC
Q psy13144 922 VNPCIPSPCGPNSQCRD-----INGSPSCSCLPTFIGAPPNCRPECIQNSECPF 970 (1031)
Q Consensus 922 ~~~C~~~~C~~~~~C~~-----~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~ 970 (1031)
.++|.++||.++++|++ ..++|+|.|++||+|. +|+ .+++++..
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~--~Ce---~~i~~~~~ 54 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA--RCT---ENVPMKVQ 54 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEEST--TSC---EECCSSCT
T ss_pred cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCC--ccC---cCcCcccc
Confidence 46788899999999997 6789999999999998 787 46676654
No 77
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.38 E-value=6.7e-05 Score=57.00 Aligned_cols=38 Identities=26% Similarity=0.523 Sum_probs=32.0
Q ss_pred CCCCCCC---CCCCCCCcccccC--CCeeeecCCCCcCCCCCCCCCCccC
Q psy13144 236 YTNPCQP---SPCGPNSQCREVN--HQAVCSCLPNYFGSPPACRPECTVN 280 (1031)
Q Consensus 236 ~~d~C~~---~~C~~~g~C~~~~--g~y~C~C~~Gy~g~~~~C~~~C~~~ 280 (1031)
++++|.+ +||.+ |+|++.. ++|+|.|++||+|. +|+..
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~------~Ce~~ 44 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGV------RCEHF 44 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSST------TSCCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccC------CCCcc
Confidence 5688887 89998 8999755 68999999999999 77643
No 78
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.32 E-value=2.6e-05 Score=90.84 Aligned_cols=77 Identities=22% Similarity=0.628 Sum_probs=36.7
Q ss_pred eeEeCCCCccCCCccccCCCCCCCCCCCCCcCCCCCCCCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCCCCC
Q psy13144 891 VCNCKPGFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPF 970 (1031)
Q Consensus 891 ~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~ 970 (1031)
..+|..||.|. .|+ +++|.. +|.+ ++|++. ++|.|++||+|. +|+ +++|
T Consensus 378 p~~C~~~~~g~---~c~--------------~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~--~C~-----~~~C-- 426 (463)
T 2wg3_C 378 PEECRATVQPA---QTL--------------TSECSR-LCRN-GYCTPT---GKCCCSPGWEGD--FCR-----TAKC-- 426 (463)
T ss_dssp CGGGCCCCCCC---CCC--------------CCHHHH-HCCS-EEECTT---SCEEECTTEEST--TSC-----EECC--
T ss_pred cccCCCCCcCC---CCc--------------cccccC-CCCC-CccCCC---CeECCCCCcCCC--cCC-----cCcC--
Confidence 46888899988 675 467865 6987 799863 589999999998 675 1233
Q ss_pred cchhccccccCCCCCCCCCCCeeeecCCCceeeCCCCCccCCCC
Q psy13144 971 DKACIREKCIDPCPGSCGYNALCKVINHSPICTCPDGFVGDAFS 1014 (1031)
Q Consensus 971 ~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 1014 (1031)
..+|.++++|++. ++|.|++||+|..|+
T Consensus 427 -------------~~~C~~~g~C~~~---~~C~C~~G~~G~~C~ 454 (463)
T 2wg3_C 427 -------------EPACRHGGVCVRP---NKCLCKKGYLGPQCE 454 (463)
T ss_dssp --------------------------------------------
T ss_pred -------------CCCCCCCCEECCC---CEEECCCCcccCCCC
Confidence 2368888999976 589999999999987
No 79
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.27 E-value=3.7e-05 Score=89.55 Aligned_cols=77 Identities=23% Similarity=0.693 Sum_probs=34.7
Q ss_pred eeecCCCCcCCCCCCCCCcccCCCCCCcccccCCcccCCCCCCCCCCCceeecCCCeeeEeCCCCccCCCccccCCCCCC
Q psy13144 834 VCSCLPNYFGSPPACRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSKIPPPP 913 (1031)
Q Consensus 834 ~C~C~~G~~g~g~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~ 913 (1031)
..+|..+|.|. .|+.. .|.. +|.+ ++|+.. ++|.|++||+|. .|+
T Consensus 378 p~~C~~~~~g~------~c~~~-------~C~~---------~C~n-G~C~~~---~~C~C~~G~~G~---~C~------ 422 (463)
T 2wg3_C 378 PEECRATVQPA------QTLTS-------ECSR---------LCRN-GYCTPT---GKCCCSPGWEGD---FCR------ 422 (463)
T ss_dssp CGGGCCCCCCC------CCCCC-------HHHH---------HCCS-EEECTT---SCEEECTTEEST---TSC------
T ss_pred cccCCCCCcCC------CCccc-------cccC---------CCCC-CccCCC---CeECCCCCcCCC---cCC------
Confidence 46788889888 45431 3332 3665 788763 489999999999 795
Q ss_pred CCCCCCCcCCCCCCCCCCCCCceeecCCCceeeCCCCCcCCCCCCC
Q psy13144 914 PPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCR 959 (1031)
Q Consensus 914 ~~~~~~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~ 959 (1031)
+++|.+ +|.++++|++. ++|.|++||+|. .|+
T Consensus 423 --------~~~C~~-~C~~~g~C~~~---~~C~C~~G~~G~--~C~ 454 (463)
T 2wg3_C 423 --------TAKCEP-ACRHGGVCVRP---NKCLCKKGYLGP--QCE 454 (463)
T ss_dssp --------EECC----------------------------------
T ss_pred --------cCcCCC-CCCCCCEECCC---CEEECCCCcccC--CCC
Confidence 467876 99999999875 699999999998 776
No 80
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.25 E-value=6.6e-05 Score=61.50 Aligned_cols=38 Identities=24% Similarity=0.571 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCCCeecc-----cCCceeeeCCCCCcCCCCCCCCCCccC
Q psy13144 39 TNPCQPSPCGPNSQCRE-----VNHQAVCSCLPNYFGSPPACRPECTVN 82 (1031)
Q Consensus 39 ~d~C~~~~C~~~g~C~~-----~~g~~~C~C~~Gy~g~~~~c~~~C~~~ 82 (1031)
.|+|.++||.|+|+|++ ..++|+|+|++||+|. .|+..
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~------~Ce~~ 48 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA------RCTEN 48 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEEST------TSCEE
T ss_pred cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCC------ccCcC
Confidence 36788899999999996 6789999999999998 67643
No 81
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.19 E-value=0.00013 Score=82.07 Aligned_cols=29 Identities=24% Similarity=0.582 Sum_probs=23.0
Q ss_pred CCCCC-CceecCCCCceeeCCCCCcCCCCCCc
Q psy13144 157 PCGPY-SQCRDINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 157 ~C~~~-g~C~~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
.|..+ ..|....+++.|.|+++|+|. .|+
T Consensus 298 ~CnGHas~C~~~~g~~~C~C~~~ttG~--~CE 327 (426)
T 3zyj_B 298 KCNLHATVCVYDNSKLTCECEHNTTGP--DCG 327 (426)
T ss_dssp CCSSSCSCEEEETTEEEECCCTTEESS--SSC
T ss_pred cCCCchhhcCCCCCCceeeCCCCCcCC--Ccc
Confidence 35444 479887788999999999999 887
No 82
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.15 E-value=4.4e-05 Score=59.83 Aligned_cols=30 Identities=27% Similarity=0.541 Sum_probs=26.0
Q ss_pred CCCCCCceee----cCCCceeeCCCCCcCCCCCCCC
Q psy13144 929 PCGPNSQCRD----INGSPSCSCLPTFIGAPPNCRP 960 (1031)
Q Consensus 929 ~C~~~~~C~~----~~g~~~C~C~~Gy~g~~~~C~~ 960 (1031)
||.|+++|++ ..++|+|+|++||+|. +|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~--~Ce~ 48 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ--RCEY 48 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEEST--TSCE
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCC--CCcc
Confidence 7999999997 3568999999999998 7773
No 83
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.01 E-value=9.3e-05 Score=57.96 Aligned_cols=29 Identities=28% Similarity=0.561 Sum_probs=24.7
Q ss_pred CCCCCCeeeec----CCCceeeCCCCCccCCCC
Q psy13144 986 SCGYNALCKVI----NHSPICTCPDGFVGDAFS 1014 (1031)
Q Consensus 986 ~C~~~~~C~~~----~g~~~C~C~~G~~G~~c~ 1014 (1031)
+|.++|+|++. .++|+|.|++||+|.+|+
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 46779999973 468999999999999987
No 84
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.94 E-value=0.00046 Score=54.19 Aligned_cols=33 Identities=27% Similarity=0.581 Sum_probs=28.8
Q ss_pred CCCCCCCC----------CCCCCCCeecccCCceeeeCCCCCcCC
Q psy13144 37 VYTNPCQP----------SPCGPNSQCREVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 37 ~~~d~C~~----------~~C~~~g~C~~~~g~~~C~C~~Gy~g~ 71 (1031)
++||||.. .+|. ++|+++.|+|+|+|++||++.
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeEC
Confidence 47899975 6786 499999999999999999986
No 85
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.82 E-value=0.00053 Score=57.41 Aligned_cols=35 Identities=23% Similarity=0.439 Sum_probs=29.0
Q ss_pred cCCCCCC--CCCCCCCceeecCCCceee-CCCCCcCCC
Q psy13144 921 YVNPCIP--SPCGPNSQCRDINGSPSCS-CLPTFIGAP 955 (1031)
Q Consensus 921 ~~~~C~~--~~C~~~~~C~~~~g~~~C~-C~~Gy~g~~ 955 (1031)
|||||.. ++|.++++|+|+.|+|+|. +..||+++.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~ 39 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDL 39 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccc
Confidence 6899974 5799889999999999998 456787653
No 86
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.80 E-value=0.00065 Score=76.54 Aligned_cols=96 Identities=21% Similarity=0.424 Sum_probs=32.2
Q ss_pred CCCC-CeeeecCCceEeeCCCCCccCCCccccccCCCCCCCCCCCCCCCCCCCcc-cccCCceeee-cCCCccCCCCCCc
Q psy13144 420 CGEG-AICDVINHAVSCNCPAGTTGNPFVLCKPVQNEPVYTNPCHPSPCGPNSQC-REVNHQAVCS-CLPNYFGSPPACR 496 (1031)
Q Consensus 420 C~~~-~~C~~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~C~~~~C~~~g~C-~~~~g~~~C~-C~~Gy~G~~~~C~ 496 (1031)
|..+ ..|....++++|.|+.+|+|. .|+. -.......|+.+++.+ ......+.|. |+-++.|.
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~ttG~---~CE~------C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~----- 364 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHNTTGP---DCGK------CKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTN----- 364 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTTEESS---SSCE------ECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC----------
T ss_pred CCCchhhcCCCCCCceeeCCCCCcCC---Cccc------cccccccCcccCCcccccCCCCCCcccCCCCCCCcC-----
Confidence 4444 478888888999999999999 5541 0111223455443222 1222344553 33344455
Q ss_pred CcCcccCCCCCCccccCCCcCCCCCCCCCCCCeeeecCCCceeecCCCCcCCCcC
Q psy13144 497 PECTVNTDCPLDKACFNQKCVDPCPGTCGQNANCRVINHSPICTCKPGFTGDALA 551 (1031)
Q Consensus 497 ~~C~~~~~c~~~~~C~~~~C~~~c~~~C~~~g~C~~~~gs~~C~C~~Gy~G~~c~ 551 (1031)
.|+.. ..+|.++|+|++.. +|.|++||+|..|+
T Consensus 365 -~CD~~------------------t~~C~ngg~C~~~~---~C~C~~G~~G~~Ce 397 (426)
T 3zyj_B 365 -VCDNE------------------LLHCQNGGTCHNNV---RCLCPAAYTGILCE 397 (426)
T ss_dssp -------------------------------------------------------
T ss_pred -ccccC------------------cccCCCCCCcCCCC---CCcCCCCCcCCCCc
Confidence 55443 25788889998765 89999999999865
No 87
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.78 E-value=0.00076 Score=52.89 Aligned_cols=34 Identities=24% Similarity=0.570 Sum_probs=29.0
Q ss_pred CcCCCCCC----------CCCCCCCceeecCCCceeeCCCCCcCCC
Q psy13144 920 EYVNPCIP----------SPCGPNSQCRDINGSPSCSCLPTFIGAP 955 (1031)
Q Consensus 920 ~~~~~C~~----------~~C~~~~~C~~~~g~~~C~C~~Gy~g~~ 955 (1031)
+|||||.. ++|. ++|+|+.|+|+|.|++||++..
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence 47899974 5786 4899999999999999999763
No 88
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.76 E-value=0.00059 Score=57.10 Aligned_cols=34 Identities=24% Similarity=0.433 Sum_probs=29.1
Q ss_pred CCCCCCC--CCCCCCCceecCCCCceee-CCCCCcCC
Q psy13144 149 PVNPCYP--SPCGPYSQCRDINGSPSCS-CLPSYIGS 182 (1031)
Q Consensus 149 ~~d~C~~--~~C~~~g~C~~~~g~~~C~-C~~Gy~g~ 182 (1031)
|||||+. .+|..+++|+|+.|+|+|. +..||.+.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 6899974 6799889999999999998 56799876
No 89
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.69 E-value=0.00093 Score=58.52 Aligned_cols=71 Identities=24% Similarity=0.598 Sum_probs=53.8
Q ss_pred CCCCCCCCCCCceee-cCCCceeeCCCCCcCCCCCCCCCcccC--CCCCCcchhccccccCCCCCCCCCCCeeeecC---
Q psy13144 924 PCIPSPCGPNSQCRD-INGSPSCSCLPTFIGAPPNCRPECIQN--SECPFDKACIREKCIDPCPGSCGYNALCKVIN--- 997 (1031)
Q Consensus 924 ~C~~~~C~~~~~C~~-~~g~~~C~C~~Gy~g~~~~C~~~C~~~--~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~--- 997 (1031)
.|+...|..+|.|.+ ..|...|+|.+||.+++..|. .+ ..|... .+.|+.+|.|..+.
T Consensus 6 ~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv----~~~~~sC~~n------------NGGCd~nA~C~~~~~~~ 69 (99)
T 1ob1_C 6 QCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCV----ENPNPTCNEN------------NGGCDADAKCTEEDSGS 69 (99)
T ss_dssp CCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEE----ECSCCCSTTG------------GGGCCTTEEEECCSCSS
T ss_pred EeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEe----eCCCCChhhc------------CCCcCCCceeEecCCcc
Confidence 344556888899987 578999999999999976554 33 345432 24699999999775
Q ss_pred --CCceeeCCCCCcc
Q psy13144 998 --HSPICTCPDGFVG 1010 (1031)
Q Consensus 998 --g~~~C~C~~G~~G 1010 (1031)
+...|+|.+||+-
T Consensus 70 ~~~ki~C~C~~g~~~ 84 (99)
T 1ob1_C 70 NGKKITCECTKPDSY 84 (99)
T ss_dssp SSCCCEEEECSTTCC
T ss_pred cCCceEeEeCCCCcc
Confidence 5789999999753
No 90
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.53 E-value=0.00098 Score=52.74 Aligned_cols=45 Identities=24% Similarity=0.525 Sum_probs=33.9
Q ss_pred CCCCC--CCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCCCCCc
Q psy13144 923 NPCIP--SPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPFD 971 (1031)
Q Consensus 923 ~~C~~--~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~ 971 (1031)
|||.. .+|. +.|+|++|+|+|.|++||+.... ...|.+++||+.+
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d--~~~C~didec~cg 48 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADN--GKACIPTGPYPCG 48 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTT--SSCEEESSSSCTT
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCC--CCeeccCccccCC
Confidence 56753 3675 48999999999999999986532 2467888988644
No 91
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.49 E-value=0.0005 Score=72.99 Aligned_cols=44 Identities=20% Similarity=0.634 Sum_probs=34.9
Q ss_pred CcCCCCC--CCCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCC
Q psy13144 920 EYVNPCI--PSPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSE 967 (1031)
Q Consensus 920 ~~~~~C~--~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~e 967 (1031)
+|+|||. .++|+.++.|+|+.|+|+|.|++||+|++.. |.++|+
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~----C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQ----CVAEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSS----EEETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCc----CCCCCC
Confidence 6899997 5689999999999999999999999999754 556665
No 92
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=96.47 E-value=0.0036 Score=55.13 Aligned_cols=71 Identities=24% Similarity=0.548 Sum_probs=55.3
Q ss_pred CCCCCCCCCCCCceee-cCCCceeeCCCCCcCCCCCCCCCcccCCC-CCCcchhccccccCCCCCCCCCCCeeeecC-CC
Q psy13144 923 NPCIPSPCGPNSQCRD-INGSPSCSCLPTFIGAPPNCRPECIQNSE-CPFDKACIREKCIDPCPGSCGYNALCKVIN-HS 999 (1031)
Q Consensus 923 ~~C~~~~C~~~~~C~~-~~g~~~C~C~~Gy~g~~~~C~~~C~~~~e-C~~~~~C~~~~c~~~c~~~C~~~~~C~~~~-g~ 999 (1031)
..|....|..+|.|.. .+|...|.|.+||++++.. |+.++. |... .+.|+.+|.|..+. ..
T Consensus 11 h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~----Cv~~Np~C~~n------------NGGCd~nAeC~~~~~~k 74 (105)
T 1n1i_A 11 HKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGK----CVPASITCEEN------------NGGCAPEAECTMDDKKE 74 (105)
T ss_dssp TSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSS----EEECCCCTTSG------------GGGSCTTSEEEECTTSC
T ss_pred cEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCE----EEECCcchhhc------------CCCcCCCcEeEECCCCE
Confidence 3555556888899988 7888999999999999744 444455 5433 24699999999886 78
Q ss_pred ceeeCCCCCc
Q psy13144 1000 PICTCPDGFV 1009 (1031)
Q Consensus 1000 ~~C~C~~G~~ 1009 (1031)
..|.|+.+|+
T Consensus 75 i~C~C~~~~~ 84 (105)
T 1n1i_A 75 VECKCTKEGS 84 (105)
T ss_dssp EEEECCSTTC
T ss_pred EEeECCCCCC
Confidence 8999999965
No 93
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.46 E-value=0.0007 Score=53.03 Aligned_cols=31 Identities=23% Similarity=0.671 Sum_probs=27.9
Q ss_pred CCCCCCCCcee--ecCCCceeeCCCCCcCCCCCCC
Q psy13144 927 PSPCGPNSQCR--DINGSPSCSCLPTFIGAPPNCR 959 (1031)
Q Consensus 927 ~~~C~~~~~C~--~~~g~~~C~C~~Gy~g~~~~C~ 959 (1031)
++||.++++|+ +..++|+|.|++||+|. +|+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~--~Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGE--RCQ 43 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEEST--TSC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCC--CCC
Confidence 56999999998 67889999999999999 787
No 94
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.46 E-value=0.00094 Score=52.32 Aligned_cols=32 Identities=25% Similarity=0.674 Sum_probs=28.3
Q ss_pred CCCCCCCCeec--ccCCceeeeCCCCCcCCCCCCCCCCcc
Q psy13144 44 PSPCGPNSQCR--EVNHQAVCSCLPNYFGSPPACRPECTV 81 (1031)
Q Consensus 44 ~~~C~~~g~C~--~~~g~~~C~C~~Gy~g~~~~c~~~C~~ 81 (1031)
++||.|+|+|+ +..++|+|+|++||+|. +|+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~------~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGE------RCQY 44 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEEST------TSCE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCC------CCCc
Confidence 68999999998 67889999999999998 6764
No 95
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.46 E-value=0.00082 Score=53.20 Aligned_cols=30 Identities=30% Similarity=0.689 Sum_probs=24.8
Q ss_pred CCCCC--CCCCCCCeecccCCceeeeCCCCCcCC
Q psy13144 40 NPCQP--SPCGPNSQCREVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 40 d~C~~--~~C~~~g~C~~~~g~~~C~C~~Gy~g~ 71 (1031)
|||.. .+|+ ..|+++.|+|+|+|++||++.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~ 33 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLA 33 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEEC
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEEC
Confidence 56753 4575 399999999999999999976
No 96
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.35 E-value=0.001 Score=55.21 Aligned_cols=33 Identities=18% Similarity=0.364 Sum_probs=27.5
Q ss_pred CCCCCCCCC--CCCCCCeecccCC-ceeeeCCCCCcCC
Q psy13144 37 VYTNPCQPS--PCGPNSQCREVNH-QAVCSCLPNYFGS 71 (1031)
Q Consensus 37 ~~~d~C~~~--~C~~~g~C~~~~g-~~~C~C~~Gy~g~ 71 (1031)
+|+|+|..+ .|+ ..|+++.| +|+|+|++||.+.
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~ 38 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLL 38 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEEC
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeEC
Confidence 588999753 465 48999998 8999999999987
No 97
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.25 E-value=0.0026 Score=55.71 Aligned_cols=71 Identities=27% Similarity=0.605 Sum_probs=53.5
Q ss_pred CCCCCCCCCCceeec-CCCCeeecCCCCcCCCCCCCcCcccCCCCCCccccccCcCCCCCCCCCCCCCeeeccC-----C
Q psy13144 673 CIPSPCGPYSQCRDI-GGSPSCSCLPNYIGAPPNCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIIN-----H 746 (1031)
Q Consensus 673 C~~~~C~~~g~C~~~-~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~c~~~c~~~C~~~~~C~~~~-----g 746 (1031)
|....|+.++.|... .|..+|.|.+||.+++..|.+. ....|..+ ++.|..+|.|.... +
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~--~~~sC~~n------------NGGCd~nA~C~~~~~~~~~~ 72 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVEN--PNPTCNEN------------NGGCDADAKCTEEDSGSNGK 72 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEEC--SCCCSTTG------------GGGCCTTEEEECCSCSSSSC
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeC--CCCChhhc------------CCCcCCCceeEecCCcccCC
Confidence 334567788999874 7889999999999997555431 11466654 36789999998875 5
Q ss_pred CceeeCCCCcc
Q psy13144 747 TPICTCPDGFI 757 (1031)
Q Consensus 747 ~~~C~C~~G~~ 757 (1031)
..+|+|.+||.
T Consensus 73 ki~C~C~~g~~ 83 (99)
T 1ob1_C 73 KITCECTKPDS 83 (99)
T ss_dssp CCEEEECSTTC
T ss_pred ceEeEeCCCCc
Confidence 79999999975
No 98
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.22 E-value=0.0021 Score=53.37 Aligned_cols=48 Identities=23% Similarity=0.493 Sum_probs=37.1
Q ss_pred CcCCCCCCC--CCCCCCceeecCC-CceeeCCCCCcCCCCCCCCCcccCCCCCCc
Q psy13144 920 EYVNPCIPS--PCGPNSQCRDING-SPSCSCLPTFIGAPPNCRPECIQNSECPFD 971 (1031)
Q Consensus 920 ~~~~~C~~~--~C~~~~~C~~~~g-~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~ 971 (1031)
+|+|||..+ .|. ..|+++.| +|+|.|++||..... .+.|.+++||+-+
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D--~~tC~d~dec~Cg 53 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLAD--GVSCTPTVEYPCG 53 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTT--SSCEEECSSSCTT
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCC--CCcccCcccccCC
Confidence 578999643 575 46999999 899999999987532 3578889988644
No 99
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.95 E-value=0.0013 Score=69.76 Aligned_cols=41 Identities=29% Similarity=0.702 Sum_probs=32.9
Q ss_pred CCccccCCCCCCCCCCCCCCCCeeeecCCCceeeCCCCCccCCccccc
Q psy13144 87 LDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCN 134 (1031)
Q Consensus 87 ~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~ 134 (1031)
++|+|..+ .+.|+.++.|+|+.|+|+|.|++||.|++.. |.
T Consensus 4 DiDEC~~~------~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~-C~ 44 (285)
T 1gl4_A 4 AQQTCANN------RHQCSVHAECRDYATGFCCRCVANYTGNGRQ-CV 44 (285)
T ss_dssp ---CHHHH------GGGSCTTEEEEECSSCEEEEECTTEEECSSS-EE
T ss_pred cchhccCC------CCCCCCCCEeEcCCCCeEEEcCCCCCCCCCc-CC
Confidence 45677754 3789999999999999999999999988754 75
No 100
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.62 E-value=0.0034 Score=61.87 Aligned_cols=41 Identities=34% Similarity=0.811 Sum_probs=35.1
Q ss_pred CCCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCC
Q psy13144 39 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDC 85 (1031)
Q Consensus 39 ~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C 85 (1031)
.++|.++||+++|+|++..++|+|+|++||+|. .|++.+.|
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~------~Ce~~~~c 159 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGP------ECEYVRDD 159 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEEST------TSCEECC-
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCc------ccccCccc
Confidence 457888999999999999999999999999998 77775433
No 101
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.59 E-value=0.003 Score=62.30 Aligned_cols=36 Identities=28% Similarity=0.850 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCCceecCCCCceeeCCCCCcCCCCCCc
Q psy13144 150 VNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 150 ~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
+++|.+.||.++++|++..++|+|+|++||+|. .||
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~--~Ce 154 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGP--ECE 154 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEEST--TSC
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCc--ccc
Confidence 456778899999999999999999999999999 888
No 102
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.55 E-value=0.011 Score=55.19 Aligned_cols=57 Identities=19% Similarity=0.331 Sum_probs=41.5
Q ss_pred CCCCCCceeecC--CCc-eeeCCCCCcCCCCCCCCCcccCC-CCCCcchhccccccCCCCCCCCCCCeeeecCCCceeeC
Q psy13144 929 PCGPNSQCRDIN--GSP-SCSCLPTFIGAPPNCRPECIQNS-ECPFDKACIREKCIDPCPGSCGYNALCKVINHSPICTC 1004 (1031)
Q Consensus 929 ~C~~~~~C~~~~--g~~-~C~C~~Gy~g~~~~C~~~C~~~~-eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C 1004 (1031)
||+|+++|++.. .+| +|.|++||+|. +|+. +++ +|.. + ...+|++.+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~--~Ce~---~~~~~C~~-------------------g-----~G~~YrG~~ 52 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ--HCEI---DKSKTCYE-------------------G-----NGHFYRGKA 52 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEEST--TSCE---ESSCCSBC-------------------S-----SCTTCCSCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCc--cccc---cCcCCCcc-------------------c-----ccccceeec
Confidence 799999999885 667 99999999998 7772 222 2221 1 123678888
Q ss_pred CCCCccCCCC
Q psy13144 1005 PDGFVGDAFS 1014 (1031)
Q Consensus 1005 ~~G~~G~~c~ 1014 (1031)
..+++|..|.
T Consensus 53 ~~t~sG~~Cq 62 (122)
T 2fd6_A 53 STDTMGRPCL 62 (122)
T ss_dssp CBBTTSCBBC
T ss_pred cccccCCccc
Confidence 8888888775
No 103
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.51 E-value=0.012 Score=51.82 Aligned_cols=69 Identities=25% Similarity=0.546 Sum_probs=53.6
Q ss_pred CCCCCCCCCCceee-cCCCCeeecCCCCcCCCCCCCcCcccCCC-CCCccccccCcCCCCCCCCCCCCCeeeccC-CCce
Q psy13144 673 CIPSPCGPYSQCRD-IGGSPSCSCLPNYIGAPPNCRPECVMNSE-CPSNEACINEKCGDPCPGSCGYNAECKIIN-HTPI 749 (1031)
Q Consensus 673 C~~~~C~~~g~C~~-~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~-C~~~~~C~~~~c~~~c~~~C~~~~~C~~~~-g~~~ 749 (1031)
|....|+.++.|.. ..|..+|.|..||.+++..|. .++. |..+ .+.|..+|.|..+. ..-+
T Consensus 13 C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv----~~Np~C~~n------------NGGCd~nAeC~~~~~~ki~ 76 (105)
T 1n1i_A 13 CIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCV----PASITCEEN------------NGGCAPEAECTMDDKKEVE 76 (105)
T ss_dssp CCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEE----ECCCCTTSG------------GGGSCTTSEEEECTTSCEE
T ss_pred ecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEE----ECCcchhhc------------CCCcCCCcEeEECCCCEEE
Confidence 44446778899998 578889999999999975544 3455 6554 36799999999885 7789
Q ss_pred eeCCCCcc
Q psy13144 750 CTCPDGFI 757 (1031)
Q Consensus 750 C~C~~G~~ 757 (1031)
|.|..+|.
T Consensus 77 C~C~~~~~ 84 (105)
T 1n1i_A 77 CKCTKEGS 84 (105)
T ss_dssp EECCSTTC
T ss_pred eECCCCCC
Confidence 99999854
No 104
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=95.14 E-value=0.0058 Score=47.37 Aligned_cols=25 Identities=32% Similarity=0.707 Sum_probs=21.1
Q ss_pred CCCCCCCeecccCCceeeeCCCCCcCC
Q psy13144 45 SPCGPNSQCREVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 45 ~~C~~~g~C~~~~g~~~C~C~~Gy~g~ 71 (1031)
.+|+ ..|+++.|+|+|+|++||++.
T Consensus 6 g~C~--~~C~n~~gs~~C~C~~Gy~L~ 30 (51)
T 1kig_L 6 GGCD--QFCREERSEVRCSCAHGYVLG 30 (51)
T ss_dssp TSSS--SCCCEETTEECCCCCTTEEEC
T ss_pred CCcC--CEeEcCCCCeEEeCCCCcEEC
Confidence 3454 379999999999999999976
No 105
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=95.11 E-value=0.0093 Score=46.22 Aligned_cols=38 Identities=21% Similarity=0.603 Sum_probs=29.1
Q ss_pred CCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCCCCC
Q psy13144 929 PCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPF 970 (1031)
Q Consensus 929 ~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~ 970 (1031)
+|. +.|+|+.|+|+|.|++||+.... .+.|.+++|++-
T Consensus 7 ~C~--~~C~n~~gs~~C~C~~Gy~L~~d--~~tC~dide~pC 44 (51)
T 1kig_L 7 GCD--QFCREERSEVRCSCAHGYVLGDD--SKSCVSTERFPC 44 (51)
T ss_dssp SSS--SCCCEETTEECCCCCTTEEECTT--SSCEEECSSSCT
T ss_pred CcC--CEeEcCCCCeEEeCCCCcEECCC--CCccccCCcccC
Confidence 564 36999999999999999985532 356778888753
No 106
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.79 E-value=0.021 Score=53.26 Aligned_cols=56 Identities=20% Similarity=0.481 Sum_probs=40.7
Q ss_pred CCCCCCeecccC--Cce-eeeCCCCCcCCCCCCCCCCccCCCCCCCccccCCCCCCCCCCCCCCCCeeeecCCCceeeCC
Q psy13144 46 PCGPNSQCREVN--HQA-VCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVINHSPICRCK 122 (1031)
Q Consensus 46 ~C~~~g~C~~~~--g~~-~C~C~~Gy~g~~~~c~~~C~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~ 122 (1031)
||+|+|+|++.. .+| +|+|++||+|. .|+...+ .+|..+ ...+|++.+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~------~Ce~~~~----~~C~~g------------------~G~~YrG~~~ 53 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ------HCEIDKS----KTCYEG------------------NGHFYRGKAS 53 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEEST------TSCEESS----CCSBCS------------------SCTTCCSCCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCc------cccccCc----CCCccc------------------ccccceeecc
Confidence 799999999874 556 99999999998 6776431 123321 1136889999
Q ss_pred CCCccCC
Q psy13144 123 AGFTGDP 129 (1031)
Q Consensus 123 ~Gy~G~~ 129 (1031)
.+++|..
T Consensus 54 ~t~sG~~ 60 (122)
T 2fd6_A 54 TDTMGRP 60 (122)
T ss_dssp BBTTSCB
T ss_pred ccccCCc
Confidence 8888886
No 107
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.53 E-value=0.0091 Score=47.59 Aligned_cols=30 Identities=27% Similarity=0.549 Sum_probs=25.8
Q ss_pred CCCCCCcee--e--cCCCceeeCCCCCcCCCCCCCC
Q psy13144 929 PCGPNSQCR--D--INGSPSCSCLPTFIGAPPNCRP 960 (1031)
Q Consensus 929 ~C~~~~~C~--~--~~g~~~C~C~~Gy~g~~~~C~~ 960 (1031)
||.|+++|+ + ..++|+|.|++||+|. +|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~--~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ--RCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESS--SSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccC--CCcc
Confidence 899999998 3 4567999999999999 7874
No 108
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.22 E-value=0.015 Score=46.29 Aligned_cols=30 Identities=20% Similarity=0.536 Sum_probs=25.5
Q ss_pred CCCCCCeecc----cCCceeeeCCCCCcCCCCCCCCCCcc
Q psy13144 46 PCGPNSQCRE----VNHQAVCSCLPNYFGSPPACRPECTV 81 (1031)
Q Consensus 46 ~C~~~g~C~~----~~g~~~C~C~~Gy~g~~~~c~~~C~~ 81 (1031)
||.|+|+|+. ..++|.|.|++||+|. +|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~------~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ------RCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESS------SSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccC------CCcc
Confidence 8999999983 4558999999999998 6764
No 109
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=94.06 E-value=0.021 Score=44.62 Aligned_cols=36 Identities=25% Similarity=0.510 Sum_probs=28.2
Q ss_pred CceeecCC-CceeeCCCCCcCCCCCCCCCcccCCCCCCc
Q psy13144 934 SQCRDING-SPSCSCLPTFIGAPPNCRPECIQNSECPFD 971 (1031)
Q Consensus 934 ~~C~~~~g-~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~ 971 (1031)
..|+++.+ +|+|.|++||+.... .+.|.+++||+-+
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~D--g~tC~d~dec~cg 47 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLAD--GVSCTPTVEYPCG 47 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTT--SSCEEECSSSCTT
T ss_pred CEeEcCCCCCEEeeCCCCCEECCC--CCcccCCccccCC
Confidence 46999999 799999999986532 3568889988643
No 110
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=93.95 E-value=0.014 Score=45.61 Aligned_cols=21 Identities=19% Similarity=0.458 Sum_probs=18.9
Q ss_pred CeecccCC-ceeeeCCCCCcCC
Q psy13144 51 SQCREVNH-QAVCSCLPNYFGS 71 (1031)
Q Consensus 51 g~C~~~~g-~~~C~C~~Gy~g~ 71 (1031)
..|+++.+ +|+|+|++||++.
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~ 32 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLL 32 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEEC
T ss_pred CEeEcCCCCCEEeeCCCCCEEC
Confidence 37999988 7999999999986
No 111
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.61 E-value=0.025 Score=66.70 Aligned_cols=37 Identities=32% Similarity=0.776 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCCCeecc-cCCceeeeCC-CCCcCCCCCCCCCCcc
Q psy13144 39 TNPCQPSPCGPNSQCRE-VNHQAVCSCL-PNYFGSPPACRPECTV 81 (1031)
Q Consensus 39 ~d~C~~~~C~~~g~C~~-~~g~~~C~C~-~Gy~g~~~~c~~~C~~ 81 (1031)
+|+|.++||+|+|+|++ ..++|+|.|+ +||+|. .|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~------~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP------NCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETT------TTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCC------CCCC
Confidence 57899999999999999 8999999999 999998 6765
No 112
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.47 E-value=0.031 Score=65.98 Aligned_cols=33 Identities=30% Similarity=0.853 Sum_probs=30.2
Q ss_pred CCCCCCCCCCCCCeecc-cCCceeeeCC-CCCcCC
Q psy13144 39 TNPCQPSPCGPNSQCRE-VNHQAVCSCL-PNYFGS 71 (1031)
Q Consensus 39 ~d~C~~~~C~~~g~C~~-~~g~~~C~C~-~Gy~g~ 71 (1031)
+|+|.++||+|+|+|++ ..++|+|.|+ +||+|.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~ 35 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE 35 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETT
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCC
Confidence 47899999999999996 5589999999 999998
No 113
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.22 E-value=0.028 Score=66.27 Aligned_cols=36 Identities=36% Similarity=0.778 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCCCceec-CCCCceeeCC-CCCcCCCCCCc
Q psy13144 150 VNPCYPSPCGPYSQCRD-INGSPSCSCL-PSYIGSPPNCR 187 (1031)
Q Consensus 150 ~d~C~~~~C~~~g~C~~-~~g~~~C~C~-~Gy~g~~~~C~ 187 (1031)
+|+|.++||.++|+|++ ..++|+|.|+ +||+|. .|+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~--~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP--NCT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETT--TTC
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCC--CCC
Confidence 57899999999999999 8999999999 999999 887
No 114
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.17 E-value=0.037 Score=65.37 Aligned_cols=37 Identities=32% Similarity=0.829 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCCceee-cCCCceeeCC-CCCcCCCCCCCC
Q psy13144 922 VNPCIPSPCGPNSQCRD-INGSPSCSCL-PTFIGAPPNCRP 960 (1031)
Q Consensus 922 ~~~C~~~~C~~~~~C~~-~~g~~~C~C~-~Gy~g~~~~C~~ 960 (1031)
+|+|.++||+|+|+|++ ..++|+|.|+ +||+|. +|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~--~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE--NCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETT--TTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCC--CCCC
Confidence 47899999999999996 5689999999 999999 7873
No 115
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=92.55 E-value=0.059 Score=52.91 Aligned_cols=40 Identities=28% Similarity=0.744 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCccCCCC
Q psy13144 40 NPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDC 85 (1031)
Q Consensus 40 d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~~~~C 85 (1031)
..|.+++|+++|+|++..++|+|.|++||+|. .|+....|
T Consensus 120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~------~C~~~~~c 159 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIINNYTCNCDVGYYGP------QCQFVQVD 159 (164)
T ss_dssp CCCCTTSSCSSEEEEEETTEEEEEECTTCBSS------SSCBC---
T ss_pred CCCCCCcCCCCCeecccCCCceeeeCCCcccc------cccccccC
Confidence 45777899999999999999999999999998 67765544
No 116
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.72 E-value=0.041 Score=54.48 Aligned_cols=33 Identities=27% Similarity=0.701 Sum_probs=27.4
Q ss_pred CcCCCCCCCC-----CCCCCceeecCCCceeeCCCCCcCC
Q psy13144 920 EYVNPCIPSP-----CGPNSQCRDINGSPSCSCLPTFIGA 954 (1031)
Q Consensus 920 ~~~~~C~~~~-----C~~~~~C~~~~g~~~C~C~~Gy~g~ 954 (1031)
.+++||...+ |.+ .|+++.|+|+|.|++||++.
T Consensus 122 ~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~ 159 (170)
T 1szb_A 122 EDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH 159 (170)
T ss_dssp EECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred cccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence 4678997543 765 69999999999999999965
No 117
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=91.59 E-value=0.31 Score=54.65 Aligned_cols=92 Identities=25% Similarity=0.547 Sum_probs=61.2
Q ss_pred CCCCCe-eeecC--C--CceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCc-ee-c----------
Q psy13144 104 CGQNAN-CKVIN--H--SPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYSQ-CR-D---------- 166 (1031)
Q Consensus 104 C~~~~~-C~~~~--g--~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~g~-C~-~---------- 166 (1031)
|..++. |.... + ..+|.|..+++|..++.|.+..--.+++.......+.|.+-+|..++. |. +
T Consensus 268 CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~ 347 (403)
T 2y38_A 268 CHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQ 347 (403)
T ss_dssp CTTBCSCEEESCTTSTTCEEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCC
T ss_pred cCCCccccCCCCCCCccceEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccc
Confidence 555554 75422 1 246999999999997778755443333222223456788777876654 74 1
Q ss_pred -----CCCCceee-CCCCCcCCCCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCC
Q psy13144 167 -----INGSPSCS-CLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSP 223 (1031)
Q Consensus 167 -----~~g~~~C~-C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~~ 223 (1031)
..++..|. |++++.|. .|+ +|.+||.|.+
T Consensus 348 ~~~~~~~~~G~C~~C~~nt~G~--~CE--------------------------rC~~GYyg~p 382 (403)
T 2y38_A 348 NQDNVYQGGGVCLDCQHHTTGI--NCE--------------------------RCLPGFFRAP 382 (403)
T ss_dssp CTTSCSCCCEEESSCCSSEEST--TSC--------------------------EECTTCEECT
T ss_pred cccccCCCCCCCCCCcCcCcCC--CCC--------------------------cCCCCccCCC
Confidence 13466895 99999999 777 8899999886
No 118
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=91.57 E-value=0.17 Score=56.48 Aligned_cols=92 Identities=22% Similarity=0.451 Sum_probs=54.8
Q ss_pred CCCCCe-ee-ecCCCceeeCCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCC-cee-------cCCCCcee
Q psy13144 104 CGQNAN-CK-VINHSPICRCKAGFTGDPFTYCNRIPPPPPPQEDVPEPVNPCYPSPCGPYS-QCR-------DINGSPSC 173 (1031)
Q Consensus 104 C~~~~~-C~-~~~g~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~~~d~C~~~~C~~~g-~C~-------~~~g~~~C 173 (1031)
|..++. |. +..+++.|.|++||+|..+..|.+..--.+...........|.+-.|..++ .|. -...+.+|
T Consensus 257 Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C 336 (375)
T 4aqt_A 257 CNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHC 336 (375)
T ss_dssp CTTSCSCEEECTTSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEE
T ss_pred CCCCCcccCCCCCCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCC
Confidence 444444 32 344678999999999999776764432222222222334456554454433 231 11234578
Q ss_pred -eCCCCCcCCCCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCC
Q psy13144 174 -SCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSP 223 (1031)
Q Consensus 174 -~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~~ 223 (1031)
.|++||+|. .|+ +|.+||.|.+
T Consensus 337 ~~C~~n~~G~--~Ce--------------------------~C~~Gyyg~~ 359 (375)
T 4aqt_A 337 TNCRDNTDGA--KCE--------------------------RCRENFFRLG 359 (375)
T ss_dssp CSCTTTEEST--TSC--------------------------EECSSEECCT
T ss_pred CCCCCCCcCC--CCC--------------------------CCCcCcccCc
Confidence 499999888 776 8889998874
No 119
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=91.30 E-value=0.079 Score=42.28 Aligned_cols=21 Identities=29% Similarity=0.678 Sum_probs=18.8
Q ss_pred CeecccC-CceeeeCCCCCcCC
Q psy13144 51 SQCREVN-HQAVCSCLPNYFGS 71 (1031)
Q Consensus 51 g~C~~~~-g~~~C~C~~Gy~g~ 71 (1031)
..|++.. |+|+|+|++||.+.
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~ 32 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLA 32 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEEC
T ss_pred CEeEeCCCCCEEeeCCCCcEEC
Confidence 3899988 69999999999986
No 120
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=90.87 E-value=0.1 Score=51.17 Aligned_cols=42 Identities=29% Similarity=0.751 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCcccccCCCeeeecCCCCcCCCCCCCCCCccCCCCCC
Q psy13144 238 NPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPL 285 (1031)
Q Consensus 238 d~C~~~~C~~~g~C~~~~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~ 285 (1031)
..|.+.+|.++|+|++..++|.|.|++||.|. .|++...|+.
T Consensus 120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~------~C~~~~~c~~ 161 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIINNYTCNCDVGYYGP------QCQFVQVDPR 161 (164)
T ss_dssp CCCCTTSSCSSEEEEEETTEEEEEECTTCBSS------SSCBC-----
T ss_pred CCCCCCcCCCCCeecccCCCceeeeCCCcccc------cccccccCcc
Confidence 45667889999999999999999999999999 8887765553
No 121
>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1
Probab=90.85 E-value=0.11 Score=33.35 Aligned_cols=24 Identities=63% Similarity=1.394 Sum_probs=21.1
Q ss_pred CcCccCCCCCCCCcccCCccCCCC
Q psy13144 632 PECTVNTDCPLDKACFNQKCVDPC 655 (1031)
Q Consensus 632 ~~C~~~~~C~~~~~C~~~~C~~~C 655 (1031)
+||..+.+|+.+..|++++|+++|
T Consensus 2 pEC~~~sdCp~~~aC~n~kC~dPC 25 (26)
T 1oig_A 2 PECVLNSDCPSNQACVNQKCRDPX 25 (26)
T ss_dssp CSCCSSTTSSTTCEECSSSEECC-
T ss_pred CcccccCcCCcCHhhhcCcccCCC
Confidence 589999999999999999998766
No 122
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=90.74 E-value=0.29 Score=54.57 Aligned_cols=29 Identities=21% Similarity=0.574 Sum_probs=20.9
Q ss_pred CCCCCCc-ee-cCCCCceeeCCCCCcCCCCCCc
Q psy13144 157 PCGPYSQ-CR-DINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 157 ~C~~~g~-C~-~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
.|..++. |. +..+++.|.|+++|.|. .|+
T Consensus 256 ~Cngh~s~c~~~~~~~~~C~C~~nt~G~--~Ce 286 (375)
T 4aqt_A 256 KCNGHASECVKNEFDKLMCNCKHNTYGV--DCE 286 (375)
T ss_dssp CCTTSCSCEEECTTSCEEECCCTTEEST--TSC
T ss_pred cCCCCCcccCCCCCCCeeeeCcCCCcCC--Ccc
Confidence 3555554 33 34567889999999999 887
No 123
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=89.98 E-value=0.08 Score=51.44 Aligned_cols=37 Identities=27% Similarity=0.753 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCCeecccCCceeeeCCCCCcCCCCCCCCCCcc
Q psy13144 39 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTV 81 (1031)
Q Consensus 39 ~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~c~~~C~~ 81 (1031)
.++|.++||.++++|.+..++|.|.|++||+|. .|+.
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~------~Ce~ 155 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGL------KCEQ 155 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEEST------TSCE
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCccCc------cccc
Confidence 357888999999999999999999999999998 6764
No 124
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=88.78 E-value=0.27 Score=39.11 Aligned_cols=31 Identities=19% Similarity=0.427 Sum_probs=23.0
Q ss_pred CceeecC-CCceeeCCCCCcCCCCCCCCCcccCC
Q psy13144 934 SQCRDIN-GSPSCSCLPTFIGAPPNCRPECIQNS 966 (1031)
Q Consensus 934 ~~C~~~~-g~~~C~C~~Gy~g~~~~C~~~C~~~~ 966 (1031)
..|++++ |+|+|.|++||....+ .+.|.+++
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~~D--~~tC~d~~ 42 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLAEN--QKSCEPAV 42 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEECTT--SSCEEESS
T ss_pred CEeEeCCCCCEEeeCCCCcEECCC--CCcccCCC
Confidence 4699999 6999999999986532 24555554
No 125
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=88.57 E-value=0.78 Score=51.39 Aligned_cols=66 Identities=24% Similarity=0.513 Sum_probs=45.4
Q ss_pred ceeecCCCCcCCCcCccccccCcCcchhhccccccccCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCe-eee-----
Q psy13144 537 PICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNEPVYTNPCQPSPCGPNSQ-CRE----- 610 (1031)
Q Consensus 537 ~~C~C~~Gy~G~~c~~C~~~~~~~~~~~~~~~~~~~~~g~~G~~~~~C~~~~~~~~~~~eC~~~~C~~~~~-C~~----- 610 (1031)
.+|.|..+++|..|++|. +||+|.++..= .....++|.+-+|..++. |.-
T Consensus 286 g~C~C~hnT~G~~CErC~-------------------pGy~g~p~~~a-----t~~~~~~C~pC~Cnghs~~C~~d~~~~ 341 (403)
T 2y38_A 286 LQCACQHNTCGGSCDRCC-------------------PGFNQQPWKPA-----TTDSANECQSCNCHGHAYDCYYDPEVD 341 (403)
T ss_dssp EEECCCTTEESSSCCEEC-------------------TTCCSSCCCCC-----CSSCCCCCCCCCCTTSCSCEEECHHHH
T ss_pred eEeECcCcCcCCCCCCCC-------------------ccccCCccccc-----ccCCCccccccccCCCCcccccCcccc
Confidence 469999999999998764 58888643211 011346787777876654 741
Q ss_pred -----------cCCceeee-CCCCcccC
Q psy13144 611 -----------VNHQAVCS-CLPNYFGS 626 (1031)
Q Consensus 611 -----------~~g~y~C~-C~~Gy~g~ 626 (1031)
..++..|. |..+++|.
T Consensus 342 ~~~~s~~~~~~~~~~G~C~~C~~nt~G~ 369 (403)
T 2y38_A 342 RREASQNQDNVYQGGGVCLDCQHHTTGI 369 (403)
T ss_dssp HTTCCCCTTSCSCCCEEESSCCSSEEST
T ss_pred cccccccccccCCCCCCCCCCcCcCcCC
Confidence 13456896 99999998
No 126
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=88.35 E-value=0.34 Score=37.10 Aligned_cols=29 Identities=21% Similarity=0.508 Sum_probs=23.0
Q ss_pred CCCCCCCeeee--cCCCceeeCCCCCccCCCC
Q psy13144 985 GSCGYNALCKV--INHSPICTCPDGFVGDAFS 1014 (1031)
Q Consensus 985 ~~C~~~~~C~~--~~g~~~C~C~~G~~G~~c~ 1014 (1031)
+.|.+ ++|.- ..+.+.|.|+.||+|.+|+
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence 35665 59983 3457899999999999997
No 127
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=88.34 E-value=0.16 Score=50.24 Aligned_cols=33 Identities=27% Similarity=0.590 Sum_probs=27.7
Q ss_pred CCCCCCCCCC-----CCCCCeecccCCceeeeCCCCCcCC
Q psy13144 37 VYTNPCQPSP-----CGPNSQCREVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 37 ~~~d~C~~~~-----C~~~g~C~~~~g~~~C~C~~Gy~g~ 71 (1031)
.++++|...+ |++ .|++..|+|+|+|++||++.
T Consensus 122 ~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~ 159 (170)
T 1szb_A 122 EDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH 159 (170)
T ss_dssp EECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred cccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence 3778997544 765 89999999999999999976
No 128
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=87.95 E-value=0.32 Score=37.19 Aligned_cols=30 Identities=30% Similarity=0.835 Sum_probs=24.9
Q ss_pred CCCCCCCCceeec--CCCceeeCCCCCcCCCCCCC
Q psy13144 927 PSPCGPNSQCRDI--NGSPSCSCLPTFIGAPPNCR 959 (1031)
Q Consensus 927 ~~~C~~~~~C~~~--~g~~~C~C~~Gy~g~~~~C~ 959 (1031)
.+.|.++ +|... .+.++|.|++||+|. +|+
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~--RCe 44 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGA--RCE 44 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCccc--CCC
Confidence 3579986 99754 478999999999999 776
No 129
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=87.63 E-value=0.23 Score=41.73 Aligned_cols=35 Identities=34% Similarity=0.857 Sum_probs=26.5
Q ss_pred CCCCC---CCCCCCCCcee--cCCCCceeeCCCCCcCCCCCCc
Q psy13144 150 VNPCY---PSPCGPYSQCR--DINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 150 ~d~C~---~~~C~~~g~C~--~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
.++|. .+.|.++ +|+ ...+.+.|.|++||+|. .|+
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~--RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGE--RCH 76 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEEST--TCC
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccc--ccc
Confidence 46676 5789985 995 34467899999999999 776
No 130
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=87.11 E-value=0.27 Score=41.33 Aligned_cols=32 Identities=28% Similarity=0.787 Sum_probs=24.7
Q ss_pred CCCCC---CCCCCCCCeec--ccCCceeeeCCCCCcCC
Q psy13144 39 TNPCQ---PSPCGPNSQCR--EVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 39 ~d~C~---~~~C~~~g~C~--~~~g~~~C~C~~Gy~g~ 71 (1031)
.++|. .+.|.|+ +|+ ...+.+.|.|++||+|.
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~ 73 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGE 73 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEEST
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccc
Confidence 46786 6889985 995 34468899999999998
No 131
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=87.10 E-value=0.3 Score=37.40 Aligned_cols=29 Identities=28% Similarity=0.816 Sum_probs=23.4
Q ss_pred CCCCCCCeee--ecCCCceeeCCCCCccCCCC
Q psy13144 985 GSCGYNALCK--VINHSPICTCPDGFVGDAFS 1014 (1031)
Q Consensus 985 ~~C~~~~~C~--~~~g~~~C~C~~G~~G~~c~ 1014 (1031)
+.|.+ |+|. ...+.+.|.|++||+|.+|+
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence 45776 7897 34457899999999999998
No 132
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=87.05 E-value=0.57 Score=44.77 Aligned_cols=31 Identities=19% Similarity=0.575 Sum_probs=25.7
Q ss_pred CCCCCCeeccc--CCce-eeeCCCCCcCCCCCCCCCCccC
Q psy13144 46 PCGPNSQCREV--NHQA-VCSCLPNYFGSPPACRPECTVN 82 (1031)
Q Consensus 46 ~C~~~g~C~~~--~g~~-~C~C~~Gy~g~~~~c~~~C~~~ 82 (1031)
||.|+|+|+.. ...| +|.|++||.|. .|+..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~------~Cei~ 47 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQ------HCEID 47 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEEST------TSCEE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCC------ceecc
Confidence 89999999875 3556 89999999998 67654
No 133
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=86.99 E-value=0.45 Score=36.37 Aligned_cols=29 Identities=28% Similarity=0.738 Sum_probs=23.7
Q ss_pred CCCCCCCeeeecC--CCceeeCCCCCccCCCC
Q psy13144 985 GSCGYNALCKVIN--HSPICTCPDGFVGDAFS 1014 (1031)
Q Consensus 985 ~~C~~~~~C~~~~--g~~~C~C~~G~~G~~c~ 1014 (1031)
+.|.++ +|.... ..+.|.|++||+|.+|+
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 457765 998543 67899999999999997
No 134
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=86.87 E-value=0.14 Score=49.75 Aligned_cols=36 Identities=22% Similarity=0.712 Sum_probs=32.1
Q ss_pred CCCCCCCCCCCCCceecCCCCceeeCCCCCcCCCCCCc
Q psy13144 150 VNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 150 ~d~C~~~~C~~~g~C~~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
+++|.+.||.++++|.+...+|.|+|.+||+|+ .||
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~--~Ce 154 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGL--KCE 154 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEEST--TSC
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCccCc--ccc
Confidence 356777899999999999999999999999999 886
No 135
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=86.33 E-value=0.35 Score=37.01 Aligned_cols=30 Identities=37% Similarity=0.863 Sum_probs=24.7
Q ss_pred CCCCCCCCcee--cCCCCceeeCCCCCcCCCCCCc
Q psy13144 155 PSPCGPYSQCR--DINGSPSCSCLPSYIGSPPNCR 187 (1031)
Q Consensus 155 ~~~C~~~g~C~--~~~g~~~C~C~~Gy~g~~~~C~ 187 (1031)
.+.|.+ |+|. ...+.+.|.|++||+|. .|+
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~--RCe 44 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGA--RCE 44 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETT--TTC
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccC--CCC
Confidence 367888 7996 45567899999999999 887
No 136
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=84.41 E-value=0.83 Score=34.89 Aligned_cols=32 Identities=34% Similarity=0.890 Sum_probs=25.2
Q ss_pred CCCCC---CCCCCCCCeec--ccCCceeeeCCCCCcCC
Q psy13144 39 TNPCQ---PSPCGPNSQCR--EVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 39 ~d~C~---~~~C~~~g~C~--~~~g~~~C~C~~Gy~g~ 71 (1031)
.++|. .+.|.+ |+|. ...+.+.|.|+.||+|.
T Consensus 9 ~~~C~~~~~~yC~n-G~C~~i~~~~~~~C~C~~gy~G~ 45 (50)
T 2rnl_A 9 KNPCNAEFQNFCIH-GECKYIEHLEAVTCKCQQEYFGE 45 (50)
T ss_dssp CCTTTTTGGGTCSS-SEEEEETTTTEEEEECCSSCCSS
T ss_pred CcccCchhhCcCCC-CEEEEecCCCCeeEECCCCcccc
Confidence 35665 367886 6997 45668999999999998
No 137
>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1
Probab=84.22 E-value=0.6 Score=30.06 Aligned_cols=24 Identities=67% Similarity=1.514 Sum_probs=20.9
Q ss_pred CCCcCCCCCCCCcccccCcccCCC
Q psy13144 392 PECVLNNDCPSNKACIKYKCKNPC 415 (1031)
Q Consensus 392 ~eC~~~~~C~~~~~C~~~~C~~~C 415 (1031)
+||..+.+|+.+..|++++|+|+|
T Consensus 2 pEC~~~sdCp~~~aC~n~kC~dPC 25 (26)
T 1oig_A 2 PECVLNSDCPSNQACVNQKCRDPX 25 (26)
T ss_dssp CSCCSSTTSSTTCEECSSSEECC-
T ss_pred CcccccCcCCcCHhhhcCcccCCC
Confidence 589999999999999999999877
No 138
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=83.61 E-value=0.58 Score=49.90 Aligned_cols=56 Identities=20% Similarity=0.445 Sum_probs=44.0
Q ss_pred CCCCCeeeCceeecCCCCccCCcccCCC---------CCcCC---CCCCCCCccccCCCCCceeeecCCCCcCC
Q psy13144 783 CVPNAECRDGVCVCLPDYYGDGYVSCGP---------ECILN---NDCPSNKACIRNKFNKQAVCSCLPNYFGS 844 (1031)
Q Consensus 783 C~~~~~C~~~~C~C~~G~~G~~c~~~~~---------~C~~~---~~C~~~g~C~~~~~~~~~~C~C~~G~~g~ 844 (1031)
|..+|++.-+.|+|.+||+|..|+-..+ .|... ..|.++|+|+-. +|+|..+|.+.
T Consensus 198 C~g~G~~~CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG------~C~C~~~~~~~ 265 (280)
T 2p26_A 198 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG------QCLCHTSDVPG 265 (280)
T ss_dssp GGGSEEEETTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT------EEEECCCSSTT
T ss_pred cCCCCeECCCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC------eeECcCCCCCC
Confidence 6677899999999999999999973221 68632 359889999864 89999888665
No 139
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=82.06 E-value=0.78 Score=45.25 Aligned_cols=29 Identities=45% Similarity=1.167 Sum_probs=24.8
Q ss_pred CCCCCCCCCeeeecCCCceeeCCCCCccCCCC
Q psy13144 983 CPGSCGYNALCKVINHSPICTCPDGFVGDAFS 1014 (1031)
Q Consensus 983 c~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 1014 (1031)
|...|.++|.|+... +|.|++||+|..|+
T Consensus 151 C~~~C~ngG~Cv~P~---~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 151 CPGGCRNGGFCNERR---ICECPDGFHGPHCE 179 (188)
T ss_dssp CTTCCCTTCEECTTS---CEECCTTCBTTTTC
T ss_pred cCCCCCCCCEeCCCC---cccCcCCCCCCCCc
Confidence 345688999999865 79999999999997
No 140
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=81.04 E-value=0.86 Score=51.80 Aligned_cols=34 Identities=21% Similarity=0.544 Sum_probs=31.2
Q ss_pred CCCCCCCCCCCCCCeecccCCceeeeCCC-CCcCC
Q psy13144 38 YTNPCQPSPCGPNSQCREVNHQAVCSCLP-NYFGS 71 (1031)
Q Consensus 38 ~~d~C~~~~C~~~g~C~~~~g~~~C~C~~-Gy~g~ 71 (1031)
..++|.++||.++|+|+...++|+|.|+. ||+|.
T Consensus 184 ~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~ 218 (410)
T 3asi_A 184 PSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP 218 (410)
T ss_dssp CSSCCCTTSSSTTCEEEECSSSEEEECTTTSEEST
T ss_pred CCCCcccccCCCCCEecCCCCCceEeccCCcccCC
Confidence 34789999999999999999999999996 99998
No 141
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=80.83 E-value=1.3 Score=42.25 Aligned_cols=27 Identities=22% Similarity=0.566 Sum_probs=20.1
Q ss_pred CCCCCCeeeecC--CCc-eeeCCCCCccCC
Q psy13144 103 TCGQNANCKVIN--HSP-ICRCKAGFTGDP 129 (1031)
Q Consensus 103 ~C~~~~~C~~~~--g~~-~C~C~~Gy~G~~ 129 (1031)
+|.++|+|+... ..| +|.|++||.|..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~ 43 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH 43 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTT
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCc
Confidence 577788887752 445 788888888875
No 142
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=80.00 E-value=0.87 Score=44.92 Aligned_cols=30 Identities=37% Similarity=1.101 Sum_probs=24.8
Q ss_pred CCCCCCCCCceeecCCCeeeEeCCCCccCCCccccC
Q psy13144 873 CPGSCGQNANCRVINHNAVCNCKPGFTGEPRIRCSK 908 (1031)
Q Consensus 873 C~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~~~~C~~ 908 (1031)
|+..|.++|.|+.-. +|.|++||+|. .|+.
T Consensus 151 C~~~C~ngG~Cv~P~---~C~C~~Gw~G~---~C~~ 180 (188)
T 2ygo_A 151 CPGGCRNGGFCNERR---ICECPDGFHGP---HCEG 180 (188)
T ss_dssp CTTCCCTTCEECTTS---CEECCTTCBTT---TTCB
T ss_pred cCCCCCCCCEeCCCC---cccCcCCCCCC---CCcC
Confidence 345799999998743 99999999999 7873
No 143
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=79.72 E-value=1.2 Score=50.71 Aligned_cols=37 Identities=27% Similarity=0.626 Sum_probs=33.6
Q ss_pred CCCCCCCCCCCCCCceecCCCCceeeCCC-CCcCCCCCCc
Q psy13144 149 PVNPCYPSPCGPYSQCRDINGSPSCSCLP-SYIGSPPNCR 187 (1031)
Q Consensus 149 ~~d~C~~~~C~~~g~C~~~~g~~~C~C~~-Gy~g~~~~C~ 187 (1031)
..+.|.++||.++|+|++..++|+|.|+. ||.|. .|+
T Consensus 184 ~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~--~C~ 221 (410)
T 3asi_A 184 PSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP--LCN 221 (410)
T ss_dssp CSSCCCTTSSSTTCEEEECSSSEEEECTTTSEEST--TSC
T ss_pred CCCCcccccCCCCCEecCCCCCceEeccCCcccCC--CCC
Confidence 45789999999999999999999999996 99999 776
No 144
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=74.65 E-value=1.4 Score=42.57 Aligned_cols=33 Identities=33% Similarity=0.742 Sum_probs=27.2
Q ss_pred CCCCCCCC---CCCCCCCeecccCCceeeeCCCCCcCC
Q psy13144 37 VYTNPCQP---SPCGPNSQCREVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 37 ~~~d~C~~---~~C~~~g~C~~~~g~~~C~C~~Gy~g~ 71 (1031)
.++|+|.. .+|+ ..|++..++|+|+|++||++.
T Consensus 115 ~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 115 TDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH 150 (159)
T ss_dssp EECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred ccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEEC
Confidence 36788964 3575 489999999999999999976
No 145
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=74.40 E-value=2.8 Score=36.01 Aligned_cols=71 Identities=23% Similarity=0.589 Sum_probs=50.5
Q ss_pred CCCCCCCCCCccccc-CCCeeeecCCCCcCCCCCCCCCCccCCCCCCCccccCCCcCCCCCCCCCCCCeeeeeC-CCcee
Q psy13144 240 CQPSPCGPNSQCREV-NHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQNQKCADPCPGTCGQNANCKVIN-HSPIC 317 (1031)
Q Consensus 240 C~~~~C~~~g~C~~~-~g~y~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~-g~~~C 317 (1031)
|...-|..++.|... .+.-+|.|..+|.-++..|++. .. ..|+.+ ++.|.++|.|.... ..-.|
T Consensus 7 C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~--~~------~~C~~N------NGGCd~nA~C~~~~~~kIvC 72 (95)
T 1b9w_A 7 CIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPA--PN------MTCKDK------NGGCAPEAECKMNDKNEIVC 72 (95)
T ss_dssp CSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEEC--TT------CCTTTG------GGGSCTTSEEEECTTSCEEE
T ss_pred cccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcC--CC------CCcccc------CCCcCCCcceeecCCCcEEE
Confidence 444467788999875 4678999999998776555431 11 123322 37899999999887 67899
Q ss_pred eCCCCCc
Q psy13144 318 RCKAGFT 324 (1031)
Q Consensus 318 ~C~~G~~ 324 (1031)
+|...+.
T Consensus 73 ~C~~~~~ 79 (95)
T 1b9w_A 73 KCTKEGS 79 (95)
T ss_dssp ECCSTTE
T ss_pred ECCCCCC
Confidence 9998764
No 146
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=73.21 E-value=1.2 Score=47.71 Aligned_cols=31 Identities=29% Similarity=0.639 Sum_probs=24.9
Q ss_pred CCCCCCC---CCCCCCeecccCCceeeeCCCCCcCC
Q psy13144 39 TNPCQPS---PCGPNSQCREVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 39 ~d~C~~~---~C~~~g~C~~~~g~~~C~C~~Gy~g~ 71 (1031)
+|||..+ .|+ ..|++..++|+|.|.+||.+.
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~C~~G~~l~ 35 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTCSCAQGYRLG 35 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCCBCCTTEEEC
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEecCCCCcccC
Confidence 5788643 564 489999999999999999886
No 147
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=72.16 E-value=3.5 Score=35.37 Aligned_cols=72 Identities=26% Similarity=0.576 Sum_probs=50.7
Q ss_pred CCCCCCCCCCCceeec-CCCceeeCCCCCcCCCCCCCCCcccCCCCCCcchhccccccCCCCCCCCCCCeeeecC-CCce
Q psy13144 924 PCIPSPCGPNSQCRDI-NGSPSCSCLPTFIGAPPNCRPECIQNSECPFDKACIREKCIDPCPGSCGYNALCKVIN-HSPI 1001 (1031)
Q Consensus 924 ~C~~~~C~~~~~C~~~-~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~~~~C~~~~c~~~c~~~C~~~~~C~~~~-g~~~ 1001 (1031)
.|....|..++.|... .+.-.|.|..+|.-++..|.+ .....|... -+.|..+|.|.... ....
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~--~~~~~C~~N------------NGGCd~nA~C~~~~~~kIv 71 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVP--APNMTCKDK------------NGGCAPEAECKMNDKNEIV 71 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEE--CTTCCTTTG------------GGGSCTTSEEEECTTSCEE
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEc--CCCCCcccc------------CCCcCCCcceeecCCCcEE
Confidence 4544568888999885 568899999999877544331 011134432 24799999999887 6789
Q ss_pred eeCCCCCc
Q psy13144 1002 CTCPDGFV 1009 (1031)
Q Consensus 1002 C~C~~G~~ 1009 (1031)
|+|...+.
T Consensus 72 C~C~~~~~ 79 (95)
T 1b9w_A 72 CKCTKEGS 79 (95)
T ss_dssp EECCSTTE
T ss_pred EECCCCCC
Confidence 99998864
No 148
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=71.19 E-value=1.9 Score=41.66 Aligned_cols=33 Identities=33% Similarity=0.792 Sum_probs=26.5
Q ss_pred CCCCCCCC---CCCCCCCceecCCCCceeeCCCCCcCC
Q psy13144 148 EPVNPCYP---SPCGPYSQCRDINGSPSCSCLPSYIGS 182 (1031)
Q Consensus 148 ~~~d~C~~---~~C~~~g~C~~~~g~~~C~C~~Gy~g~ 182 (1031)
.++++|.. .+|. +.|++..++|+|.|++||++.
T Consensus 115 ~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 115 TDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH 150 (159)
T ss_dssp EECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred ccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEEC
Confidence 35788874 3565 589999999999999999954
No 149
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=68.46 E-value=1.3 Score=52.83 Aligned_cols=44 Identities=23% Similarity=0.382 Sum_probs=35.4
Q ss_pred eCCCCcccCCCCCCCCCCCCCCCCCccCCCC--CCCCCCeeeCceeecCCCCccCCcccC
Q psy13144 751 TCPDGFIGDPFTSCSPKPPEPVQPVIQEDTC--NCVPNAECRDGVCVCLPDYYGDGYVSC 808 (1031)
Q Consensus 751 ~C~~G~~g~~~~~C~~~~~~~~~~~~~~~~c--~C~~~~~C~~~~C~C~~G~~G~~c~~~ 808 (1031)
.|.+||.|+ .|... ..| .|..+|.|+++.|+|.+||.|..|...
T Consensus 521 ~C~~gw~g~---dc~i~-----------~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 521 DKQQTWAID---NVYIG-----------DGCLDMCSGHGRCVQGSCVCDEQWGGLYCDEP 566 (725)
T ss_dssp CTTCCEEEE---EEEEE-----------SCSSGGGGGSEEEETTEEEECTTEESTTSCEE
T ss_pred ccCCCcccc---ccccc-----------CCCCcccCCCcEECCCCEeeCCCccCCCcCcc
Confidence 789999999 56621 112 489999999999999999999988643
No 150
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=66.94 E-value=3.2 Score=44.35 Aligned_cols=45 Identities=24% Similarity=0.597 Sum_probs=32.3
Q ss_pred CCCCCC---CCCCCCCceeecCCCceeeCCCCCcCCCCCCCCCcccCCCCCC
Q psy13144 922 VNPCIP---SPCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPECIQNSECPF 970 (1031)
Q Consensus 922 ~~~C~~---~~C~~~~~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~eC~~ 970 (1031)
+|||.. ..|. ..|+++.++|+|.|++||..... .+.|...++|.-
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~C~~G~~l~~d--~~sC~p~~~c~C 49 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTCSCAQGYRLGED--HKQCVPHDQCAC 49 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCCBCCTTEEECTT--SSCEEECSTTCT
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEecCCCCcccCCC--CCcccccccccc
Confidence 578853 3665 46999999999999999987632 345666676653
No 151
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=63.90 E-value=1.9 Score=47.66 Aligned_cols=31 Identities=23% Similarity=0.492 Sum_probs=18.4
Q ss_pred CCCCC-CCCCCCCCeecccCCceeeeCCCCCcCC
Q psy13144 39 TNPCQ-PSPCGPNSQCREVNHQAVCSCLPNYFGS 71 (1031)
Q Consensus 39 ~d~C~-~~~C~~~g~C~~~~g~~~C~C~~Gy~g~ 71 (1031)
||||. ...|++ .|+++.|+|+|+|++||.+.
T Consensus 1 i~ec~~~~~C~~--~C~n~~g~~~C~C~~g~~l~ 32 (349)
T 3v64_C 1 VNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELR 32 (349)
T ss_dssp --------CCSS--EECCC---CCEECCTTEEEC
T ss_pred CcccCCCCCCcC--eeecCCCCeEEECCCCccCC
Confidence 46775 345764 89999999999999999986
No 152
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=63.55 E-value=3.9 Score=53.39 Aligned_cols=34 Identities=21% Similarity=0.568 Sum_probs=31.2
Q ss_pred CCCCCCCCCCCCCCeecccCCceeeeCC-CCCcCC
Q psy13144 38 YTNPCQPSPCGPNSQCREVNHQAVCSCL-PNYFGS 71 (1031)
Q Consensus 38 ~~d~C~~~~C~~~g~C~~~~g~~~C~C~-~Gy~g~ 71 (1031)
..+.|.++||.++|+|+....+|+|.|+ +||+|.
T Consensus 1016 ~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~ 1050 (1245)
T 3qcw_A 1016 PSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP 1050 (1245)
T ss_dssp CCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBST
T ss_pred ccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCC
Confidence 3478999999999999999999999999 699998
No 153
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=62.18 E-value=4.1 Score=53.17 Aligned_cols=36 Identities=25% Similarity=0.597 Sum_probs=32.7
Q ss_pred CCCCCCCCCCCCCceecCCCCceeeCC-CCCcCCCCCCc
Q psy13144 150 VNPCYPSPCGPYSQCRDINGSPSCSCL-PSYIGSPPNCR 187 (1031)
Q Consensus 150 ~d~C~~~~C~~~g~C~~~~g~~~C~C~-~Gy~g~~~~C~ 187 (1031)
.+.|.++||.++|+|+....+|+|.|+ +||.|. .|+
T Consensus 1017 ~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~--~C~ 1053 (1245)
T 3qcw_A 1017 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGP--LCN 1053 (1245)
T ss_dssp CCCCCTTSSSSSCEEEEETTEEEEECTTSSCBST--TSC
T ss_pred cCceECCcCCCCCEeCCCCCCCEEECCCCCCCCC--Ccc
Confidence 467889999999999999999999999 699999 776
No 154
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=59.39 E-value=4.8 Score=42.77 Aligned_cols=62 Identities=21% Similarity=0.498 Sum_probs=38.3
Q ss_pred CCCCCeeeccCCCceeeCCCCcccCCCCCCCCCCCCCC-----CCCccC-CCCCCCCCCeeeCceeecCCCCccC
Q psy13144 735 CGYNAECKIINHTPICTCPDGFIGDPFTSCSPKPPEPV-----QPVIQE-DTCNCVPNAECRDGVCVCLPDYYGD 803 (1031)
Q Consensus 735 C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~-----~~~~~~-~~c~C~~~~~C~~~~C~C~~G~~G~ 803 (1031)
|+.+|+|.-. .|.|.+||+|.. |+=...... ..|... ..-.|+.+|+|+-+.|+|..+|.+.
T Consensus 198 C~g~G~~~CG----~C~C~~g~~G~~---CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG~C~C~~~~~~~ 265 (280)
T 2p26_A 198 CHGKGFLECG----ICRCDTGYIGKN---CECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPG 265 (280)
T ss_dssp GGGSEEEETT----EEEECTTEESTT---SCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETTEEEECCCSSTT
T ss_pred cCCCCeECCC----ceeCCCCCcCCc---ceecCCccccccccccCCCCCCCCccCCCceEeCCeeECcCCCCCC
Confidence 5556666542 899999999994 541110000 012111 1124888999999999998887543
No 155
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=55.08 E-value=3.1 Score=49.61 Aligned_cols=25 Identities=24% Similarity=0.468 Sum_probs=23.0
Q ss_pred CCCCCCeeccceeecCCCcccCCCC
Q psy13144 364 NCAPNAVCKDEVCVCLPDFYGDGYV 388 (1031)
Q Consensus 364 ~C~~~g~C~~~~C~C~~G~~G~~c~ 388 (1031)
.|..+|+|++++|+|.+||.|..|.
T Consensus 540 ~C~ghG~C~~G~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 540 MCSGHGRCVQGSCVCDEQWGGLYCD 564 (725)
T ss_dssp GGGGSEEEETTEEEECTTEESTTSC
T ss_pred ccCCCcEECCCCEeeCCCccCCCcC
Confidence 4899999999999999999999864
No 156
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=54.76 E-value=4.8 Score=44.35 Aligned_cols=32 Identities=28% Similarity=0.653 Sum_probs=18.4
Q ss_pred CCCCC-CCCCCCCCceeecCCCceeeCCCCCcCCC
Q psy13144 922 VNPCI-PSPCGPNSQCRDINGSPSCSCLPTFIGAP 955 (1031)
Q Consensus 922 ~~~C~-~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~ 955 (1031)
||||. ...|.+ .|+|+.|+|+|.|++||...+
T Consensus 1 i~ec~~~~~C~~--~C~n~~g~~~C~C~~g~~l~~ 33 (349)
T 3v64_C 1 VNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELRP 33 (349)
T ss_dssp --------CCSS--EECCC---CCEECCTTEEECT
T ss_pred CcccCCCCCCcC--eeecCCCCeEEECCCCccCCC
Confidence 46775 235764 799999999999999998653
No 157
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=52.84 E-value=3.8 Score=48.05 Aligned_cols=70 Identities=21% Similarity=0.534 Sum_probs=43.4
Q ss_pred CCCCCceecCCCCceeeCCCCCcCCCCCCcccCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCC
Q psy13144 158 CGPYSQCRDINGSPSCSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVHEPVYT 237 (1031)
Q Consensus 158 C~~~g~C~~~~g~~~C~C~~Gy~g~~~~C~~~C~~~~~C~~~~~C~n~~~~~~C~~~C~~G~~g~~~~~C~~~~~~~~~~ 237 (1031)
|...|..+...| .|.|.+||...+..|+ .|++||.... .. .
T Consensus 252 C~~dG~w~~p~G--~C~C~~G~e~~~~~C~--------------------------aC~~g~~k~~---~~--------~ 292 (536)
T 3fl7_A 252 CAVDGEWLVPIG--QCLCQAGYEKVEDACQ--------------------------ACSPGFFKFE---AS--------E 292 (536)
T ss_dssp ECTTSCBCCCBC--CCEECTTEEEETTEEE--------------------------ECCTTEECCS---CC--------S
T ss_pred EcCCCCEecccC--cEeccCccccCCceee--------------------------ecCCCCCccc---CC--------C
Confidence 555566544333 7999999985533443 7888877652 11 1
Q ss_pred CCCCCCCCCCCCcccccCCCeeeecCCCCcCC
Q psy13144 238 NPCQPSPCGPNSQCREVNHQAVCSCLPNYFGS 269 (1031)
Q Consensus 238 d~C~~~~C~~~g~C~~~~g~y~C~C~~Gy~g~ 269 (1031)
..|+ +|..+.. ....|+|.|.|..||.-.
T Consensus 293 ~~C~--~CP~~S~-s~~~Gs~~C~C~ng~~ra 321 (536)
T 3fl7_A 293 SPCL--ECPEHTL-PSPEGATSCECEEGFFRA 321 (536)
T ss_dssp SCCE--ECCSSEE-CCCTTCSSCEECTTCBCC
T ss_pred Cccc--cCCCCCC-CCCCCccEEEEecccccc
Confidence 2343 3544433 334688999999999755
No 158
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=47.32 E-value=9.3 Score=43.94 Aligned_cols=38 Identities=32% Similarity=0.627 Sum_probs=31.1
Q ss_pred CCCCC---CCCCCCCCceeec-CCCceeeCCCCCcCCCCCCC
Q psy13144 922 VNPCI---PSPCGPNSQCRDI-NGSPSCSCLPTFIGAPPNCR 959 (1031)
Q Consensus 922 ~~~C~---~~~C~~~~~C~~~-~g~~~C~C~~Gy~g~~~~C~ 959 (1031)
++.|. .+||..++.|+.+ .+.|.|.|+.||.|.+..|.
T Consensus 18 ~~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 18 QRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp CCBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred cccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 45674 3699999999887 56789999999999987664
No 159
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=40.32 E-value=15 Score=42.25 Aligned_cols=39 Identities=18% Similarity=0.554 Sum_probs=31.9
Q ss_pred CCCcCC--CCCCCCCccccCCCCCceeeecCCCCcCCCCCCC
Q psy13144 810 PECILN--NDCPSNKACIRNKFNKQAVCSCLPNYFGSPPACR 849 (1031)
Q Consensus 810 ~~C~~~--~~C~~~g~C~~~~~~~~~~C~C~~G~~g~g~~C~ 849 (1031)
..|... ++|..++.|+... .+.|.|+|+.||.|.|..|.
T Consensus 19 ~~c~~~~~~~c~~~a~C~~~~-~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 19 RFCPDGSPSECHEHADCVLER-DGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp CBCTTSSBCCCCTTEEEEECT-TSCEEEEECTTEESSSSSCE
T ss_pred ccCCCCCCCCCCCCCeeEeCC-CCCEecCCCCCCCCCCcccC
Confidence 345543 6899999999874 68899999999999998775
No 160
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=37.84 E-value=19 Score=38.85 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=22.0
Q ss_pred CCCCCCC--CCCCCCeecccCC--ceeeeCCCCCcCC
Q psy13144 39 TNPCQPS--PCGPNSQCREVNH--QAVCSCLPNYFGS 71 (1031)
Q Consensus 39 ~d~C~~~--~C~~~g~C~~~~g--~~~C~C~~Gy~g~ 71 (1031)
.++|..+ .|+ ..|...++ +|+|.|+.||++.
T Consensus 267 ~n~C~~~ng~Cs--~~C~~~~~~~~~~C~C~~g~~l~ 301 (318)
T 3sov_A 267 TNPCGIDNGGCS--HLCLMSPVKPFYQCACPTGVKLL 301 (318)
T ss_dssp CCTTTTTGGGCS--SEEEECSSTTSEEEECSTTCCBC
T ss_pred ccccccCCCCcc--eEEecCCCCCCeEEECCCCCEEC
Confidence 3556432 343 37887665 7999999999987
No 161
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=32.45 E-value=25 Score=37.80 Aligned_cols=32 Identities=19% Similarity=0.419 Sum_probs=24.4
Q ss_pred CCCCCCCC-----CCCCCCeecccC------CceeeeCCCCCcCC
Q psy13144 38 YTNPCQPS-----PCGPNSQCREVN------HQAVCSCLPNYFGS 71 (1031)
Q Consensus 38 ~~d~C~~~-----~C~~~g~C~~~~------g~~~C~C~~Gy~g~ 71 (1031)
..|+|..+ .|+ ..|.+.+ ++|+|.|+.||++.
T Consensus 266 ~~n~C~~~~~~ng~Cs--~~C~~~p~~~~~~~~~~C~C~~g~~l~ 308 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQ--YLCLPAPQINPHSPKFTCACPDGMLLA 308 (316)
T ss_dssp CCCTTSSSSSGGGGCS--SEEEECCCCSTTCCSEEEECCTTCEEC
T ss_pred ccccccccccCCCCcC--cccCCCccccCCCCCeEeeCCCCCEEC
Confidence 56788754 464 3888764 68999999999986
No 162
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=25.71 E-value=27 Score=41.68 Aligned_cols=32 Identities=31% Similarity=0.556 Sum_probs=25.6
Q ss_pred CCCCCCCC--CCCCCCeecccC-CceeeeCCCCCcCC
Q psy13144 38 YTNPCQPS--PCGPNSQCREVN-HQAVCSCLPNYFGS 71 (1031)
Q Consensus 38 ~~d~C~~~--~C~~~g~C~~~~-g~~~C~C~~Gy~g~ 71 (1031)
.+|+|..+ .|+ ..|.+.+ ++|+|.|++||.+.
T Consensus 264 ~~n~C~~~ng~C~--~~C~~~~~~~~~C~C~~g~~l~ 298 (628)
T 4a0p_A 264 GWNECASSNGHCS--HLCLAVPVGGFVCGCPAHYSLN 298 (628)
T ss_dssp CCCTTTTTGGGCS--SEEEEETTTEEEEECSTTCEEC
T ss_pred cceEeccCCCCcc--hhhhcCCCCCeeEEcCCCcEec
Confidence 56788753 454 4899988 99999999999986
No 163
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=21.14 E-value=22 Score=39.21 Aligned_cols=26 Identities=38% Similarity=1.057 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCceeecCCCeeeEeCCCCcc
Q psy13144 871 DPCPGSCGQNANCRVINHNAVCNCKPGFTG 900 (1031)
Q Consensus 871 ~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~G 900 (1031)
.+||+.|..+|.|.+. +|+|.+||.|
T Consensus 192 ~~Cp~~CsGhG~C~~g----~C~Cd~G~~g 217 (387)
T 2ddu_A 192 EPCPSYCSGHGDCISG----VCFCDLGYTA 217 (387)
T ss_dssp SCCGGGGGGSEEEETT----EEEECTTEEE
T ss_pred ccCccccCCCceecCC----eEEecCCccc
Done!