RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13144
(1031 letters)
>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 26
Score = 32.0 bits (72), Expect = 0.013
Identities = 18/24 (75%), Positives = 23/24 (95%)
Query: 707 RPECVMNSECPSNEACINEKCGDP 730
RPECV+NS+CPSN+AC+N+KC DP
Sbjct: 1 RPECVLNSDCPSNQACVNQKCRDP 24
Score = 30.8 bits (69), Expect = 0.040
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 391 RPECVLNNDCPSNKACIKYKCKNP 414
RPECVLN+DCPSN+AC+ KC++P
Sbjct: 1 RPECVLNSDCPSNQACVNQKCRDP 24
Score = 30.1 bits (67), Expect = 0.076
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 849 RPECTVNTDCPLDKACVNQKCVDP 872
RPEC +N+DCP ++ACVNQKC DP
Sbjct: 1 RPECVLNSDCPSNQACVNQKCRDP 24
Score = 28.9 bits (64), Expect = 0.19
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 496 RPECTVNTDCPLDKACFNQKCVDP 519
RPEC +N+DCP ++AC NQKC DP
Sbjct: 1 RPECVLNSDCPSNQACVNQKCRDP 24
Score = 28.9 bits (64), Expect = 0.19
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 631 RPECTVNTDCPLDKACFNQKCVDP 654
RPEC +N+DCP ++AC NQKC DP
Sbjct: 1 RPECVLNSDCPSNQACVNQKCRDP 24
Score = 28.9 bits (64), Expect = 0.21
Identities = 15/24 (62%), Positives = 21/24 (87%)
Query: 187 RPECIQNSECPYDKACINEKCADP 210
RPEC+ NS+CP ++AC+N+KC DP
Sbjct: 1 RPECVLNSDCPSNQACVNQKCRDP 24
Score = 28.5 bits (63), Expect = 0.22
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 76 RPECTVNSDCPLDKSCQNQKCADP 99
RPEC +NSDCP +++C NQKC DP
Sbjct: 1 RPECVLNSDCPSNQACVNQKCRDP 24
Score = 28.5 bits (63), Expect = 0.22
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 274 RPECTVNSDCPLDKSCQNQKCADP 297
RPEC +NSDCP +++C NQKC DP
Sbjct: 1 RPECVLNSDCPSNQACVNQKCRDP 24
Score = 26.6 bits (58), Expect = 1.1
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 959 RPECIQNSECPFDKACIREKCIDP 982
RPEC+ NS+CP ++AC+ +KC DP
Sbjct: 1 RPECVLNSDCPSNQACVNQKCRDP 24
Score = 24.7 bits (53), Expect = 5.8
Identities = 13/19 (68%), Positives = 17/19 (89%)
Query: 810 PECILNNDCPSNKACIRNK 828
PEC+LN+DCPSN+AC+ K
Sbjct: 2 PECVLNSDCPSNQACVNQK 20
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 28.5 bits (64), Expect = 0.34
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 922 VNPCIPSPCGPNSQCRDINGSPSCSCLPTFIG 953
+ C +PC C+D S C C F G
Sbjct: 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34
Score = 28.1 bits (63), Expect = 0.43
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 670 VNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIG 701
+ C +PC C+D S C C + G
Sbjct: 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34
Score = 27.7 bits (62), Expect = 0.69
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 150 VNPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 181
+ C +PC C+D S C C + G
Sbjct: 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34
Score = 25.8 bits (57), Expect = 3.1
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 39 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 70
+ C+ +PC C++ + C C + G
Sbjct: 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34
Score = 25.8 bits (57), Expect = 3.1
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 237 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 268
+ C+ +PC C++ + C C + G
Sbjct: 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34
Score = 25.8 bits (57), Expect = 3.1
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 594 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 625
+ C+ +PC C++ + C C + G
Sbjct: 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34
Score = 25.0 bits (55), Expect = 6.4
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 459 TNPCHPSPCGPNSQCREVNHQAVCSCLPNYFG 490
+ C +PC C++ + C C + G
Sbjct: 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34
>d1wh1a_ b.36.1.1 (A:) Hypothetical protein KIAA1095 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 124
Score = 30.3 bits (68), Expect = 0.39
Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 6/76 (7%)
Query: 531 RVINHSPICTCKPGFTGDALAYCNRIPLSNYVFEKILIQLMYCPGTTGNPFVLCKLVQNE 590
+ +S GD + N I + N E+ + L + + E
Sbjct: 54 EIDPNSIAAKDGRIREGDRIIQINGIEVQNR--EEAVALLTSEENKN----FSLLIARPE 107
Query: 591 PVYTNPCQPSPCGPNS 606
GP+S
Sbjct: 108 LQLDEGWMDDDSGPSS 123
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 28.1 bits (63), Expect = 0.47
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 922 VNPCIPSPCGPNSQCRDINGSPSCSCLPTFIG 953
VN C+ +PC ++ C D G C C+P + G
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEG 32
Score = 27.7 bits (62), Expect = 0.56
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 670 VNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIG 701
VN C+ +PC + C D G C C+P Y G
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEG 32
Score = 27.3 bits (61), Expect = 0.80
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 150 VNPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 181
VN C +PC + C D G C C+P Y G
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEG 32
Score = 24.6 bits (54), Expect = 8.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 40 NPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 70
N C +PC ++ C + + C C+P Y G
Sbjct: 2 NECVSNPCQNDATCLDQIGEFQCICMPGYEG 32
Score = 24.6 bits (54), Expect = 8.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 238 NPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 268
N C +PC ++ C + + C C+P Y G
Sbjct: 2 NECVSNPCQNDATCLDQIGEFQCICMPGYEG 32
Score = 24.6 bits (54), Expect = 8.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 595 NPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 625
N C +PC ++ C + + C C+P Y G
Sbjct: 2 NECVSNPCQNDATCLDQIGEFQCICMPGYEG 32
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 27.7 bits (62), Expect = 0.64
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 922 VNPCIPSPCGPNSQCRDINGSPSCSCLPTFIG 953
+ C SPC C+D S C CLP F G
Sbjct: 2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEG 33
Score = 27.3 bits (61), Expect = 0.91
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 670 VNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIG 701
+ C SPC C+D S C CLP + G
Sbjct: 2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEG 33
Score = 26.6 bits (59), Expect = 1.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 150 VNPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 181
+ C SPC C+D S C CLP++ G
Sbjct: 2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEG 33
>d1njra_ c.50.1.2 (A:) Hypothetical protein Ymr087W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 264
Score = 30.0 bits (67), Expect = 1.4
Identities = 7/56 (12%), Positives = 13/56 (23%)
Query: 705 NCRPECVMNSECPSNEACINEKCGDPCPGSCGYNAECKIINHTPICTCPDGFIGDP 760
+ A + + + + I H P P I +P
Sbjct: 89 TWFRNQLGGRYHTVGSATVVDLQRCLEEKTIECRDGIRYIIHVPTVVAPSAPIFNP 144
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 26.6 bits (59), Expect = 1.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 923 NPCIPSPCGPNSQCRDINGSPSCSCLPTFIG 953
+ C SPC +C+D G +C+CL F G
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEG 31
Score = 26.2 bits (58), Expect = 2.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 671 NPCIPSPCGPYSQCRDIGGSPSCSCLPNYIG 701
+ C SPC +C+D G +C+CL + G
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEG 31
Score = 25.8 bits (57), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 151 NPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 181
+ C SPC +C+D G +C+CL + G
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEG 31
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 26.2 bits (58), Expect = 2.0
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 923 NPCIPSPCGPNSQCRDINGSPSCSCLPTFIG 953
+ C SPC N +C D C C F G
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTG 31
Score = 25.8 bits (57), Expect = 2.3
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 671 NPCIPSPCGPYSQCRDIGGSPSCSCLPNYIG 701
+ C SPC +C D C C + G
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTG 31
Score = 25.4 bits (56), Expect = 3.5
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 151 NPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 181
+ C SPC +C D C C + G
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTG 31
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 25.9 bits (57), Expect = 2.7
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 923 NPCIPSPCGPNSQCRDINGSPSCSCLPTFIG 953
C + C + +C + + +C C P F G
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSG 32
Score = 25.5 bits (56), Expect = 3.9
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 39 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 70
T C + C + +C E + C C P + G
Sbjct: 1 TAACTNTSCSGHGECVETINNYTCKCDPGFSG 32
Score = 25.5 bits (56), Expect = 3.9
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 237 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 268
T C + C + +C E + C C P + G
Sbjct: 1 TAACTNTSCSGHGECVETINNYTCKCDPGFSG 32
Score = 25.5 bits (56), Expect = 3.9
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 594 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 625
T C + C + +C E + C C P + G
Sbjct: 1 TAACTNTSCSGHGECVETINNYTCKCDPGFSG 32
Score = 25.5 bits (56), Expect = 3.9
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 671 NPCIPSPCGPYSQCRDIGGSPSCSCLPNYIG 701
C + C + +C + + +C C P + G
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSG 32
Score = 25.1 bits (55), Expect = 4.9
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 151 NPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 181
C + C + +C + + +C C P + G
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSG 32
Score = 24.7 bits (54), Expect = 7.9
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 459 TNPCHPSPCGPNSQCREVNHQAVCSCLPNYFG 490
T C + C + +C E + C C P + G
Sbjct: 1 TAACTNTSCSGHGECVETINNYTCKCDPGFSG 32
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 25.9 bits (57), Expect = 2.9
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 150 VNPCYPSPCGPYSQCRDINGSPSCSCLPSYIGSPPNC 186
++ C + QC + +GS C C YI + C
Sbjct: 5 MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNEC 41
Score = 25.9 bits (57), Expect = 2.9
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 922 VNPCIPSPCGPNSQCRDINGSPSCSCLPTFIGAPPNC 958
++ C + QC + +GS C C +I A C
Sbjct: 5 MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNEC 41
Score = 25.5 bits (56), Expect = 4.1
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 670 VNPCIPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNC 706
++ C + QC + GS C C YI A C
Sbjct: 5 MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNEC 41
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 25.6 bits (56), Expect = 3.4
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 523 TCGQNANCRVINHSPICTCKPGFTGD 548
C +A CR C C +TG+
Sbjct: 8 QCSVHAECRDYATGFCCRCVANYTGN 33
Score = 25.2 bits (55), Expect = 5.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 157 PCGPYSQCRDINGSPSCSCLPSYIGSPPNCRPE 189
C +++CRD C C+ +Y G+ C E
Sbjct: 8 QCSVHAECRDYATGFCCRCVANYTGNGRQCVAE 40
Score = 24.8 bits (54), Expect = 6.3
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 929 PCGPNSQCRDINGSPSCSCLPTFIGAPPNCRPE 961
C +++CRD C C+ + G C E
Sbjct: 8 QCSVHAECRDYATGFCCRCVANYTGNGRQCVAE 40
Score = 24.8 bits (54), Expect = 6.5
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 103 TCGQNANCKVINHSPICRCKAGFTGDPFT 131
C +A C+ CRC A +TG+
Sbjct: 8 QCSVHAECRDYATGFCCRCVANYTGNGRQ 36
Score = 24.8 bits (54), Expect = 6.5
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 301 TCGQNANCKVINHSPICRCKAGFTGDPFT 329
C +A C+ CRC A +TG+
Sbjct: 8 QCSVHAECRDYATGFCCRCVANYTGNGRQ 36
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 25.5 bits (56), Expect = 3.9
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 923 NPCIPSPCGPNSQCRDINGSPSCSCLPTFIG 953
C C +C + G+ +CSC P F G
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32
Score = 25.1 bits (55), Expect = 5.2
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 39 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 70
T CQ C +C E CSC P ++G
Sbjct: 1 TASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32
Score = 25.1 bits (55), Expect = 5.2
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 237 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 268
T CQ C +C E CSC P ++G
Sbjct: 1 TASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32
Score = 25.1 bits (55), Expect = 5.2
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 594 TNPCQPSPCGPNSQCREVNHQAVCSCLPNYFG 625
T CQ C +C E CSC P ++G
Sbjct: 1 TASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32
Score = 25.1 bits (55), Expect = 5.9
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 671 NPCIPSPCGPYSQCRDIGGSPSCSCLPNYIG 701
C C +C + G+ +CSC P + G
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32
Score = 24.8 bits (54), Expect = 8.0
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 151 NPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 181
C C +C + G+ +CSC P + G
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 25.5 bits (56), Expect = 5.0
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 143 QEDVPEPVNPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 181
Q V +PC CG + C D GS SC C + G
Sbjct: 1 QCLVLPLEHPCASLCCG-HGTCIDGIGSFSCDCRSGWEG 38
Score = 25.2 bits (55), Expect = 5.6
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 516 CVDPCPGTCGQNANCRVINHSPICTCKPGFTGD 548
PC C + C S C C+ G+ G
Sbjct: 7 LEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGR 39
Score = 25.2 bits (55), Expect = 6.9
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 864 CVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGE 901
C+ PC C + C + C+C+ G+ G
Sbjct: 2 CLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGR 39
Score = 24.8 bits (54), Expect = 7.5
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 922 VNPCIPSPCGPNSQCRDINGSPSCSCLPTFIG 953
+PC CG + C D GS SC C + G
Sbjct: 8 EHPCASLCCG-HGTCIDGIGSFSCDCRSGWEG 38
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase)
{Basidomycetos fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 357
Score = 28.1 bits (62), Expect = 6.2
Identities = 19/77 (24%), Positives = 22/77 (28%), Gaps = 11/77 (14%)
Query: 897 GFTGEPRIRCSKIPPPPPPQDVPEYVNPCIPSPCGPNSQCRDINGSPSCSCLPTF---IG 953
G I CS + P P P P Q D+ S PT G
Sbjct: 280 GHNRNSLIDCSDVVPVPKP-----ATGQPAMFPASTGPQ--DLELSCPSERFPTLTTQPG 332
Query: 954 APPNCRPECIQNSE-CP 969
A + C S CP
Sbjct: 333 ASQSLIAHCPDGSMSCP 349
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 24.7 bits (54), Expect = 8.2
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 925 CIPSPCGPNSQCRDINGSPSCSCLPTFIG 953
+PC +C + GS C CL + G
Sbjct: 8 LGANPCEHAGKCINTLGSFECQCLQGYTG 36
>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium
tuberculosis, TB, gene InhA [TaxId: 1773]}
Length = 268
Score = 27.4 bits (59), Expect = 9.4
Identities = 16/166 (9%), Positives = 28/166 (16%), Gaps = 2/166 (1%)
Query: 173 CSCLPSYIGSPPNCRPECIQNSECPYDKACINEKCADPCPGFCPPGTTGSPFVQCKPIVH 232
+ R + D + P K I
Sbjct: 62 LDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHI 121
Query: 233 EPVYTNPCQ--PSPCGPNSQCREVNHQAVCSCLPNYFGSPPACRPECTVNSDCPLDKSCQ 290
P +P Y A +VN +
Sbjct: 122 SAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKY 181
Query: 291 NQKCADPCPGTCGQNANCKVINHSPICRCKAGFTGDPFTYCNRIPL 336
+ G A ++ + A + R P+
Sbjct: 182 GVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI 227
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.140 0.510
Gapped
Lambda K H
0.267 0.0376 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,470,649
Number of extensions: 269457
Number of successful extensions: 2249
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1749
Number of HSP's successfully gapped: 667
Length of query: 1031
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 937
Effective length of database: 1,116,976
Effective search space: 1046606512
Effective search space used: 1046606512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (27.1 bits)