RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13146
         (895 letters)



>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster)
           [TaxId: 7227]}
          Length = 26

 Score = 31.2 bits (70), Expect = 0.023
 Identities = 17/24 (70%), Positives = 22/24 (91%)

Query: 623 RPECVLNNDCPSNKACIRNKCKNP 646
           RPECVLN+DCPSN+AC+  KC++P
Sbjct: 1   RPECVLNSDCPSNQACVNQKCRDP 24



 Score = 31.2 bits (70), Expect = 0.023
 Identities = 17/24 (70%), Positives = 22/24 (91%)

Query: 719 RPECVLNNDCPSNKACIRNKCKNP 742
           RPECVLN+DCPSN+AC+  KC++P
Sbjct: 1   RPECVLNSDCPSNQACVNQKCRDP 24



 Score = 30.8 bits (69), Expect = 0.034
 Identities = 18/24 (75%), Positives = 20/24 (83%)

Query: 53 RPECTVNSDCPLNKACFNQKCVDP 76
          RPEC +NSDCP N+AC NQKC DP
Sbjct: 1  RPECVLNSDCPSNQACVNQKCRDP 24



 Score = 30.1 bits (67), Expect = 0.054
 Identities = 17/24 (70%), Positives = 21/24 (87%)

Query: 484 RPECTVNTDCPLDKACVNQKCVDP 507
           RPEC +N+DCP ++ACVNQKC DP
Sbjct: 1   RPECVLNSDCPSNQACVNQKCRDP 24



 Score = 28.9 bits (64), Expect = 0.15
 Identities = 16/24 (66%), Positives = 20/24 (83%)

Query: 379 RPECVQNSDCPRNKACIKLKCKNP 402
           RPECV NSDCP N+AC+  KC++P
Sbjct: 1   RPECVLNSDCPSNQACVNQKCRDP 24



 Score = 28.9 bits (64), Expect = 0.15
 Identities = 15/24 (62%), Positives = 21/24 (87%)

Query: 277 RPECIQNSECPYDKACINEKCADP 300
           RPEC+ NS+CP ++AC+N+KC DP
Sbjct: 1   RPECVLNSDCPSNQACVNQKCRDP 24



 Score = 28.5 bits (63), Expect = 0.19
 Identities = 15/24 (62%), Positives = 22/24 (91%)

Query: 164 RPECVQNNDCSNDKACINEKCQDP 187
           RPECV N+DC +++AC+N+KC+DP
Sbjct: 1   RPECVLNSDCPSNQACVNQKCRDP 24



 Score = 28.1 bits (62), Expect = 0.29
 Identities = 16/21 (76%), Positives = 18/21 (85%)

Query: 824 RPECTVNSDCPLNKACFNQKC 844
           RPEC +NSDCP N+AC NQKC
Sbjct: 1   RPECVLNSDCPSNQACVNQKC 21


>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 39

 Score = 28.1 bits (63), Expect = 0.40
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 240 INPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 271
            + C  +PC     C+D   S  C C   + G
Sbjct: 3   GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34



 Score = 28.1 bits (63), Expect = 0.41
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 127 VNPCYPSPCGPYSQCRDIGGSPSCSCLPNYIG 158
            + C  +PC     C+D   S  C C   + G
Sbjct: 3   GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34



 Score = 25.4 bits (56), Expect = 3.6
 Identities = 7/32 (21%), Positives = 13/32 (40%)

Query: 16 TNPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 47
           + C+ +PC     C++      C C   + G
Sbjct: 3  GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34



 Score = 25.4 bits (56), Expect = 3.6
 Identities = 7/32 (21%), Positives = 13/32 (40%)

Query: 447 TNPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 478
            + C+ +PC     C++      C C   + G
Sbjct: 3   GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34



 Score = 25.4 bits (56), Expect = 3.6
 Identities = 7/32 (21%), Positives = 13/32 (40%)

Query: 787 TNPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 818
            + C+ +PC     C++      C C   + G
Sbjct: 3   GDQCESNPCLNGGSCKDDINSYECWCPFGFEG 34



 Score = 24.6 bits (54), Expect = 7.7
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 645 NPCVPGTCGEGAICDVINHAVSCNCPPGTTG 675
           + C    C  G  C    ++  C CP G  G
Sbjct: 4   DQCESNPCLNGGSCKDDINSYECWCPFGFEG 34



 Score = 24.6 bits (54), Expect = 7.7
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 741 NPCVPGTCGEGAICDVINHAVSCNCPPGTTG 771
           + C    C  G  C    ++  C CP G  G
Sbjct: 4   DQCESNPCLNGGSCKDDINSYECWCPFGFEG 34


>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
           1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 39

 Score = 28.1 bits (63), Expect = 0.42
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 240 INPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 271
           +N C  +PC   + C D  G   C C+P Y G
Sbjct: 1   VNECVSNPCQNDATCLDQIGEFQCICMPGYEG 32



 Score = 27.7 bits (62), Expect = 0.52
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 127 VNPCYPSPCGPYSQCRDIGGSPSCSCLPNYIG 158
           VN C  +PC   + C D  G   C C+P Y G
Sbjct: 1   VNECVSNPCQNDATCLDQIGEFQCICMPGYEG 32



 Score = 24.3 bits (53), Expect = 8.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 17 NPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 47
          N C  +PC  ++ C +   +  C C+P Y G
Sbjct: 2  NECVSNPCQNDATCLDQIGEFQCICMPGYEG 32



 Score = 24.3 bits (53), Expect = 8.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 448 NPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 478
           N C  +PC  ++ C +   +  C C+P Y G
Sbjct: 2   NECVSNPCQNDATCLDQIGEFQCICMPGYEG 32



 Score = 24.3 bits (53), Expect = 8.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 788 NPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 818
           N C  +PC  ++ C +   +  C C+P Y G
Sbjct: 2   NECVSNPCQNDATCLDQIGEFQCICMPGYEG 32


>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
           [TaxId: 9823]}
          Length = 37

 Score = 27.3 bits (61), Expect = 0.67
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 240 INPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 271
            + C  SPC     C+D   S  C CLP++ G
Sbjct: 2   GDQCASSPCQNGGSCKDQLQSYICFCLPAFEG 33



 Score = 27.0 bits (60), Expect = 0.81
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 127 VNPCYPSPCGPYSQCRDIGGSPSCSCLPNYIG 158
            + C  SPC     C+D   S  C CLP + G
Sbjct: 2   GDQCASSPCQNGGSCKDQLQSYICFCLPAFEG 33


>d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus
           (Geotrichum candidum), ATCC 34614 [TaxId: 27317]}
          Length = 544

 Score = 30.9 bits (68), Expect = 0.74
 Identities = 32/251 (12%), Positives = 60/251 (23%), Gaps = 16/251 (6%)

Query: 224 KPPEPPPPPQE--DIPEPINPCYPSPCGPYSQCRDINGSPSCSCLPSYIGAPPNCRPECI 281
           K P+P     +     +    C     G      D     +      + G   +     +
Sbjct: 40  KHPQPFTGSYQGLKANDFSPACMQLDPGNSLTLLDKALGLAKVIPEEFRGPLYDMAKGTV 99

Query: 282 QNSE-CPYDKACINEKCADPCPGSCGYGAVCTVINHSPICTCPEGYIGDAFSSCYPKPPE 340
             +E C Y    +N       P      A   V+    +      ++  + ++       
Sbjct: 100 SMNEDCLY----LNVF----RPAGTKPDAKLPVM----VWIYGGAFVYGSSAAYPGNSYV 147

Query: 341 PVQPVIQEDTCNCAPNAECRDGVCLCLPDYYGDGYVSCRPECVQNSDCPRNKACIKLKCK 400
                + +     + N        L       +G  +      +      +         
Sbjct: 148 KESINMGQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGD 207

Query: 401 NPCVPGTCGEGAICDVVNHNVMCICPPGTTGSPFIQCKPILQEPVYTNPCQPSPCGPNSQ 460
              V    GE A    V H ++      T     +    ILQ          S  GP+  
Sbjct: 208 PDKV-MIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYHDSSSVGPDIS 266

Query: 461 CREVNKQAVCS 471
                + A C 
Sbjct: 267 YNRFAQYAGCD 277


>d2fp7b1 b.47.1.3 (B:19-170) NS3 protease {West nile virus [TaxId:
           11082]}
          Length = 152

 Score = 29.3 bits (66), Expect = 1.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 664 AVSCNCPPGTTGSPFVQSEQPVV 686
           AV+ + P GT+GSP V     V+
Sbjct: 107 AVTLDYPTGTSGSPIVDKNGDVI 129



 Score = 27.4 bits (61), Expect = 5.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)

Query: 760 AVSCNCPPGTTGSPFV 775
           AV+ + P GT+GSP V
Sbjct: 107 AVTLDYPTGTSGSPIV 122


>d2fomb1 b.47.1.3 (B:18-167) NS3 protease {Dengue virus type 2
           [TaxId: 11060]}
          Length = 150

 Score = 28.9 bits (65), Expect = 1.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 664 AVSCNCPPGTTGSPFVQSEQPVV 686
           AVS +  PGT+GSP V  +  VV
Sbjct: 108 AVSLDFSPGTSGSPIVDKKGKVV 130



 Score = 27.0 bits (60), Expect = 6.7
 Identities = 10/16 (62%), Positives = 12/16 (75%)

Query: 760 AVSCNCPPGTTGSPFV 775
           AVS +  PGT+GSP V
Sbjct: 108 AVSLDFSPGTSGSPIV 123


>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
           1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 35

 Score = 26.2 bits (58), Expect = 2.0
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 128 NPCYPSPCGPYSQCRDIGGSPSCSCLPNYIG 158
           + C  SPC    +C D      C C   + G
Sbjct: 1   DECASSPCLHNGRCLDKINEFQCECPTGFTG 31



 Score = 25.4 bits (56), Expect = 3.2
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 241 NPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 271
           + C  SPC    +C D      C C   + G
Sbjct: 1   DECASSPCLHNGRCLDKINEFQCECPTGFTG 31


>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 39

 Score = 25.8 bits (57), Expect = 2.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 128 NPCYPSPCGPYSQCRDIGGSPSCSCLPNYIG 158
           + C  SPC    +C+D  G  +C+CL  + G
Sbjct: 1   DQCETSPCQNQGKCKDGLGEYTCTCLEGFEG 31



 Score = 25.8 bits (57), Expect = 3.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 241 NPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 271
           + C  SPC    +C+D  G  +C+CL  + G
Sbjct: 1   DQCETSPCQNQGKCKDGLGEYTCTCLEGFEG 31


>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 43

 Score = 25.9 bits (57), Expect = 2.6
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 240 INPCYPSPCGPYSQCRDINGSPSCSCLPSYIGAPPNC 276
           ++ C       + QC + +GS  C C   YI A   C
Sbjct: 5   MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNEC 41



 Score = 25.1 bits (55), Expect = 4.9
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 127 VNPCYPSPCGPYSQCRDIGGSPSCSCLPNYIGAPPNC 163
           ++ C       + QC +  GS  C C   YI A   C
Sbjct: 5   MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNEC 41


>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 39

 Score = 25.5 bits (56), Expect = 3.2
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 128 NPCYPSPCGPYSQCRDIGGSPSCSCLPNYIG 158
             C  + C  + +C +   + +C C P + G
Sbjct: 2   AACTNTSCSGHGECVETINNYTCKCDPGFSG 32



 Score = 25.1 bits (55), Expect = 4.5
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 16 TNPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 47
          T  C  + C  + +C E      C C P + G
Sbjct: 1  TAACTNTSCSGHGECVETINNYTCKCDPGFSG 32



 Score = 25.1 bits (55), Expect = 4.5
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 447 TNPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 478
           T  C  + C  + +C E      C C P + G
Sbjct: 1   TAACTNTSCSGHGECVETINNYTCKCDPGFSG 32



 Score = 25.1 bits (55), Expect = 4.5
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 787 TNPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 818
           T  C  + C  + +C E      C C P + G
Sbjct: 1   TAACTNTSCSGHGECVETINNYTCKCDPGFSG 32



 Score = 25.1 bits (55), Expect = 4.5
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 241 NPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 271
             C  + C  + +C +   + +C C P + G
Sbjct: 2   AACTNTSCSGHGECVETINNYTCKCDPGFSG 32


>d1ro0a_ d.264.1.2 (A:) Bifunctional DNA primase/polymerase
           N-terminal domain {Archaeon Sulfolobus islandicus
           [TaxId: 43080]}
          Length = 210

 Score = 28.4 bits (63), Expect = 3.3
 Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 8/53 (15%)

Query: 188 CPGSCGYNALCKVINHTPICTCPDGYTGDAFSGCYPKPPEPPPPPQEDIPEPI 240
             GSC        +NH    T    +    ++ CY    E     + D+   +
Sbjct: 142 GLGSC--------VNHLHCTTDKCPWKEQNYTTCYTLYNELKEISKVDLKSLL 186


>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
           IIa) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 48

 Score = 25.5 bits (56), Expect = 3.5
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 233 QEDIPEPINPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 271
           Q  +    +PC    CG +  C D  GS SC C   + G
Sbjct: 1   QCLVLPLEHPCASLCCG-HGTCIDGIGSFSCDCRSGWEG 38



 Score = 25.5 bits (56), Expect = 3.7
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)

Query: 120 QEDVPEPVNPCYPSPCGPYSQCRDIGGSPSCSCLPNYIG 158
           Q  V    +PC    CG +  C D  GS SC C   + G
Sbjct: 1   QCLVLPLEHPCASLCCG-HGTCIDGIGSFSCDCRSGWEG 38



 Score = 25.2 bits (55), Expect = 6.0
 Identities = 9/38 (23%), Positives = 15/38 (39%)

Query: 499 CVNQKCVDPCPGSCGQNANCRVINHNAVCNCKPGFTGE 536
           C+      PC   C  +  C     +  C+C+ G+ G 
Sbjct: 2   CLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGR 39



 Score = 25.2 bits (55), Expect = 6.5
 Identities = 8/33 (24%), Positives = 13/33 (39%)

Query: 73  CVDPCPGTCGQNANCKVQNHNPICNCKPGYTGD 105
              PC   C  +  C     +  C+C+ G+ G 
Sbjct: 7   LEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGR 39


>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 40

 Score = 25.1 bits (55), Expect = 5.0
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 128 NPCYPSPCGPYSQCRDIGGSPSCSCLPNYIG 158
             C    C    +C +  G+ +CSC P + G
Sbjct: 2   ASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32



 Score = 24.8 bits (54), Expect = 6.0
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 16 TNPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 47
          T  CQ   C    +C E      CSC P ++G
Sbjct: 1  TASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32



 Score = 24.8 bits (54), Expect = 6.0
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 447 TNPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 478
           T  CQ   C    +C E      CSC P ++G
Sbjct: 1   TASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32



 Score = 24.8 bits (54), Expect = 6.0
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 787 TNPCQPSPCGPNSQCREVNKQAVCSCLPNYFG 818
           T  CQ   C    +C E      CSC P ++G
Sbjct: 1   TASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32



 Score = 24.4 bits (53), Expect = 7.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 241 NPCYPSPCGPYSQCRDINGSPSCSCLPSYIG 271
             C    C    +C +  G+ +CSC P + G
Sbjct: 2   ASCQDMSCSKQGECLETIGNYTCSCYPGFYG 32


>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
           module {Sheep (Ovis aries) [TaxId: 9940]}
          Length = 42

 Score = 24.8 bits (54), Expect = 5.9
 Identities = 11/31 (35%), Positives = 11/31 (35%), Gaps = 1/31 (3%)

Query: 126 PVNPCYPSPCGPYSQCRDIG-GSPSCSCLPN 155
           PVNPC   PC     C   G     C C   
Sbjct: 1   PVNPCCYYPCQHQGICVRFGLDRYQCDCTRT 31



 Score = 24.8 bits (54), Expect = 7.0
 Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 1/31 (3%)

Query: 239 PINPCYPSPCGPYSQCRDIN-GSPSCSCLPS 268
           P+NPC   PC     C         C C  +
Sbjct: 1   PVNPCCYYPCQHQGICVRFGLDRYQCDCTRT 31


>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
           1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 42

 Score = 24.3 bits (53), Expect = 8.2
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 238 EPINPC--YPSPCGPYSQCRDINGSPSCSCLPSYIG 271
           + ++ C    +PC    +C +  GS  C CL  Y G
Sbjct: 1   QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTG 36


>d1eg2a_ c.66.1.11 (A:) m.RsrI N6 adenosine-specific DNA
           methyltransferase {Rhodobacter sphaeroides [TaxId:
           1063]}
          Length = 279

 Score = 27.4 bits (59), Expect = 8.8
 Identities = 13/166 (7%), Positives = 29/166 (17%), Gaps = 2/166 (1%)

Query: 44  NYFGSPPACRPECTVNSDCPLNKACFNQKCVDPCPGTCGQNANCKVQNHNPICNCKPGYT 103
            + G                 +    ++  +         N     +           + 
Sbjct: 69  IFGGLQYQGEAGSGDLISIISHMRQNSKMLLANLIIWNYPNGMSAQRFFANRHEEIAWFA 128

Query: 104 GDPRVYCNKIPPRPPPQEDVPEPVNPCYPSPCGPYSQCRDIGGSPSCSCLPNYIGAP--P 161
              + + +    R P  E+                 + R+       S L          
Sbjct: 129 KTKKYFFDLDAVREPYDEETKAAYMKDKRLNPESVEKGRNPTNVWRMSRLNGNSLERVGH 188

Query: 162 NCRPECVQNNDCSNDKACINEKCQDPCPGSCGYNALCKVINHTPIC 207
             +             +       D   GS     +        IC
Sbjct: 189 PTQKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEGRNSIC 234


>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 40

 Score = 24.4 bits (53), Expect = 9.2
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 80  TCGQNANCKVQNHNPICNCKPGYTGD 105
            C  +A C+       C C   YTG+
Sbjct: 8   QCSVHAECRDYATGFCCRCVANYTGN 33



 Score = 24.4 bits (53), Expect = 9.6
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 247 PCGPYSQCRDINGSPSCSCLPSYIGAPPNCRPE 279
            C  +++CRD      C C+ +Y G    C  E
Sbjct: 8   QCSVHAECRDYATGFCCRCVANYTGNGRQCVAE 40


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.140    0.508 

Gapped
Lambda     K      H
   0.267   0.0528    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,858,396
Number of extensions: 232089
Number of successful extensions: 2052
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1558
Number of HSP's successfully gapped: 620
Length of query: 895
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 802
Effective length of database: 1,130,706
Effective search space: 906826212
Effective search space used: 906826212
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.2 bits)