BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13149
(89 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1HPQ0|TPM2_BOMMO Tropomyosin-2 OS=Bombyx mori PE=1 SV=1
Length = 285
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/25 (100%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEADKKYDEV
Sbjct: 141 MDALENQLKEARFLAEEADKKYDEV 165
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEADKKYDE A
Sbjct: 141 MDALENQLKEARFLAEEADKKYDEVA 166
>sp|P31816|TPM_LOCMI Tropomyosin OS=Locusta migratoria PE=3 SV=1
Length = 283
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/25 (100%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEADKKYDEV
Sbjct: 141 MDALENQLKEARFLAEEADKKYDEV 165
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEADKKYDE A
Sbjct: 141 MDALENQLKEARFLAEEADKKYDEVA 166
>sp|P06754|TPM1_DROME Tropomyosin-1, isoforms 9A/A/B OS=Drosophila melanogaster GN=Tm1
PE=1 SV=2
Length = 339
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/25 (100%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEADKKYDEV
Sbjct: 195 MDALENQLKEARFLAEEADKKYDEV 219
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEADKKYDE A
Sbjct: 195 MDALENQLKEARFLAEEADKKYDEVA 220
>sp|O96764|TPM_CHIKI Tropomyosin OS=Chironomus kiiensis PE=1 SV=2
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEADKKYDE A
Sbjct: 141 MDALENQLKEARFLAEEADKKYDEVA 166
>sp|O44119|TPM_HOMAM Tropomyosin OS=Homarus americanus GN=TM1 PE=1 SV=1
Length = 284
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEAD+KYDEV
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEV 165
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEAD+KYDE A
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEVA 166
>sp|Q9N2R3|TPM_CHAFE Tropomyosin (Fragment) OS=Charybdis feriatus PE=1 SV=1
Length = 264
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEAD+KYDEV
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEV 165
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEAD+KYDE A
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEVA 166
>sp|A1KYZ2|TPM_PENMO Tropomyosin OS=Penaeus monodon GN=TM1 PE=1 SV=1
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEAD+KYDEV
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEV 165
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEAD+KYDE A
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEVA 166
>sp|Q25456|TPM_METEN Tropomyosin OS=Metapenaeus ensis PE=1 SV=1
Length = 274
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEAD+KYDEV
Sbjct: 131 MDALENQLKEARFLAEEADRKYDEV 155
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEAD+KYDE A
Sbjct: 131 MDALENQLKEARFLAEEADRKYDEVA 156
>sp|O61379|TPM_PANST Tropomyosin OS=Panulirus stimpsoni PE=1 SV=1
Length = 274
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEAD+KYDEV
Sbjct: 131 MDALENQLKEARFLAEEADRKYDEV 155
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEAD+KYDE A
Sbjct: 131 MDALENQLKEARFLAEEADRKYDEVA 156
>sp|P86704|TPM_PANBO Tropomyosin OS=Pandalus borealis GN=TM1 PE=1 SV=1
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEAD+KYDEV
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEV 165
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEAD+KYDE A
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEVA 166
>sp|P49455|TPM4_DROME Tropomyosin-1, isoforms 33/34 OS=Drosophila melanogaster GN=Tm1
PE=2 SV=2
Length = 518
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/25 (100%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEADKKYDEV
Sbjct: 141 MDALENQLKEARFLAEEADKKYDEV 165
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEADKKYDE A
Sbjct: 141 MDALENQLKEARFLAEEADKKYDEVA 166
>sp|A2V735|TPM_CHIOP Tropomyosin OS=Chionoecetes opilio GN=TM1 PE=1 SV=1
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARFLAEEAD+KYDEV
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEV 165
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARFLAEEAD+KYDE A
Sbjct: 141 MDALENQLKEARFLAEEADRKYDEVA 166
>sp|Q8T6L5|TPM_PERFU Tropomyosin OS=Periplaneta fuliginosa PE=2 SV=1
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARF+AEEADKKYDEV
Sbjct: 141 MDALENQLKEARFMAEEADKKYDEV 165
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARF+AEEADKKYDE A
Sbjct: 141 MDALENQLKEARFMAEEADKKYDEVA 166
>sp|Q9NG56|TPM_BLAGE Tropomyosin OS=Blattella germanica PE=2 SV=1
Length = 284
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARF+AEEADKKYDEV
Sbjct: 141 MDALENQLKEARFMAEEADKKYDEV 165
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARF+AEEADKKYDE A
Sbjct: 141 MDALENQLKEARFMAEEADKKYDEVA 166
>sp|Q9UB83|TPM_PERAM Tropomyosin OS=Periplaneta americana PE=1 SV=1
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MDALENQLKEARF+AEEADKKYDEV
Sbjct: 141 MDALENQLKEARFMAEEADKKYDEV 165
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MDALENQLKEARF+AEEADKKYDE A
Sbjct: 141 MDALENQLKEARFMAEEADKKYDEVA 166
>sp|Q23939|TPM_DERFA Tropomyosin OS=Dermatophagoides farinae PE=1 SV=2
Length = 284
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 5 ENQLKEARFLAEEADKKYDEVIFVCGNRERRFF---PIQKYFFMDALENQLKEARFLAEE 61
E +LK A EEA + DE R R+ I MD LENQLKEAR +AE+
Sbjct: 103 EERLKIATAKLEEASQSADE-----SERMRKMLEHRSITDEERMDGLENQLKEARMMAED 157
Query: 62 ADKKYDETA 70
AD+KYDE A
Sbjct: 158 ADRKYDEVA 166
>sp|O18416|TPM_DERPT Tropomyosin OS=Dermatophagoides pteronyssinus PE=1 SV=1
Length = 284
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 5 ENQLKEARFLAEEADKKYDEVIFVCGNRERRFF---PIQKYFFMDALENQLKEARFLAEE 61
E +LK A EEA + DE R R+ I M+ LENQLKEAR +AE+
Sbjct: 103 EERLKIATAKLEEASQSADE-----SERMRKMLEHRSITDEERMEGLENQLKEARMMAED 157
Query: 62 ADKKYDETA 70
AD+KYDE A
Sbjct: 158 ADRKYDEVA 166
>sp|Q9NFZ4|TPM_LEPDS Tropomyosin OS=Lepidoglyphus destructor PE=1 SV=1
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 5 ENQLKEARFLAEEADKKYDEVIFVCGNRERRFF---PIQKYFFMDALENQLKEARFLAEE 61
E +LK A EEA + DE R R+ I M+ LE+QLKEAR +AE+
Sbjct: 103 EGRLKIATSKLEEASQSADE-----SERMRKMLEHRSITDEERMEGLESQLKEARMMAED 157
Query: 62 ADKKYDETA 70
AD+KYDE A
Sbjct: 158 ADRKYDEVA 166
>sp|P91958|TPM_MYTGA Tropomyosin OS=Mytilus galloprovincialis PE=2 SV=1
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 10/42 (23%)
Query: 29 CGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
CGN ER +D LE QL EA+++AEEADKKY+E A
Sbjct: 135 CGNDER----------IDQLEKQLTEAKWIAEEADKKYEEAA 166
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
+D LE QL EA+++AEEADKKY+E
Sbjct: 141 IDQLEKQLTEAKWIAEEADKKYEEA 165
>sp|Q8IT89|TPM_HAELO Tropomyosin OS=Haemaphysalis longicornis PE=2 SV=1
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MD LE QLKEAR +AE+AD+KYDE A
Sbjct: 141 MDGLEGQLKEARTMAEDADRKYDEVA 166
>sp|Q25457|TPM_MYTED Tropomyosin OS=Mytilus edulis PE=2 SV=1
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 10/42 (23%)
Query: 29 CGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
CGN ER +D LE QL EA+++AEEADKKY+E A
Sbjct: 135 CGNDER----------IDQLEKQLTEAKWIAEEADKKYEEAA 166
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
+D LE QL EA+++AEEADKKY+E
Sbjct: 141 IDQLEKQLTEAKWIAEEADKKYEEA 165
>sp|O97162|TPM_BOOMI Tropomyosin OS=Boophilus microplus PE=2 SV=1
Length = 284
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
MD LE QLKEAR +AE+AD+KYDE A
Sbjct: 141 MDGLEGQLKEARTMAEDADRKYDEVA 166
>sp|P42638|TPM2_SCHMA Tropomyosin-2 OS=Schistosoma mansoni PE=2 SV=1
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 1 MDALENQLKEARFLAEEADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAE 60
+++ E +L+EA EEA K DE E R F ++ + LE QLKE+ F+AE
Sbjct: 99 LESTETRLQEATVKLEEASKAADESDRGRKVLENRTFADEERI--NQLEEQLKESTFMAE 156
Query: 61 EADKKYDETA 70
+AD+KYDE A
Sbjct: 157 DADRKYDEAA 166
>sp|Q9NAS5|TPM_ANISI Tropomyosin OS=Anisakis simplex PE=1 SV=1
Length = 284
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 18 ADKKYDEVIFVCGNRERRFFPIQKYFFMD-----ALENQLKEARFLAEEADKKYDETA 70
A K +E ER ++ F D +E+QLKEA+ LAEEAD+KYDE A
Sbjct: 109 ATAKLEEATHTADESERVRKVMENRSFQDEERANTVESQLKEAQMLAEEADRKYDEVA 166
>sp|Q8T380|TPM_LEPSA Tropomyosin OS=Lepisma saccharina PE=2 SV=1
Length = 284
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 17 EADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EA DE +C E R Q MD L NQLKEAR LAE+AD K DE +
Sbjct: 115 EASHAADEASRMCKVLENR--SQQDEERMDQLTNQLKEARMLAEDADGKSDEVS 166
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 20/25 (80%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MD L NQLKEAR LAE+AD K DEV
Sbjct: 141 MDQLTNQLKEARMLAEDADGKSDEV 165
>sp|O01673|TPM_ACAVI Tropomyosin OS=Acanthocheilonema viteae PE=2 SV=1
Length = 284
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 9/65 (13%)
Query: 6 NQLKEARFLAEEADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKK 65
++L++A A+E+D+ V V NR Q + +E+QLKEA+ LAEEAD+K
Sbjct: 111 DKLEKATHTADESDR----VRKVMENR-----SFQDEERANTVESQLKEAQLLAEEADRK 161
Query: 66 YDETA 70
YDE A
Sbjct: 162 YDEVA 166
>sp|P09491|TPM2_DROME Tropomyosin-2 OS=Drosophila melanogaster GN=Tm2 PE=2 SV=1
Length = 284
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 20/25 (80%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MD L NQLKEAR LAE+AD K DEV
Sbjct: 141 MDQLTNQLKEARMLAEDADTKSDEV 165
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 17 EADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EA + DE +C E R Q MD L NQLKEAR LAE+AD K DE +
Sbjct: 115 EATQSADENNRMCKVLENR--SQQDEERMDQLTNQLKEARMLAEDADTKSDEVS 166
>sp|Q8WR63|TPM_TRIPS Tropomyosin OS=Trichinella pseudospiralis PE=2 SV=1
Length = 284
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 16 EEADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EEA + DE V E R ++ + LE QLKEA+ LAEEAD+KYDE A
Sbjct: 114 EEASQTADESERVRKVMENRSLQDEERVYQ--LEAQLKEAQLLAEEADRKYDEVA 166
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 4 LENQLKEARFLAEEADKKYDEV 25
LE QLKEA+ LAEEAD+KYDEV
Sbjct: 144 LEAQLKEAQLLAEEADRKYDEV 165
>sp|Q1HPU0|TPM1_BOMMO Tropomyosin-1 OS=Bombyx mori PE=1 SV=1
Length = 284
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 17 EADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EA + DE +C E R Q MD L NQLKEAR LAE+AD K DE +
Sbjct: 115 EAQQSADENNRMCKVLENR--AQQDEERMDQLTNQLKEARLLAEDADGKSDEVS 166
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 20/25 (80%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
MD L NQLKEAR LAE+AD K DEV
Sbjct: 141 MDQLTNQLKEARLLAEDADGKSDEV 165
>sp|Q95VA8|TPM_TRISP Tropomyosin OS=Trichinella spiralis PE=2 SV=1
Length = 284
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 17 EADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EA + DE V E R ++ + LE QLKEA+ LAEEAD+KYDE A
Sbjct: 115 EASQTADESERVRKVMENRSLQDEERVYQ--LEAQLKEAQLLAEEADRKYDEVA 166
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 4 LENQLKEARFLAEEADKKYDEV 25
LE QLKEA+ LAEEAD+KYDEV
Sbjct: 144 LEAQLKEAQLLAEEADRKYDEV 165
>sp|Q22866|TPM1_CAEEL Tropomyosin isoforms a/b/d/f OS=Caenorhabditis elegans GN=lev-11
PE=1 SV=1
Length = 284
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 16 EEADKKYDE---VIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EEA DE V V NR +Q + +E QLKEA+ LAEEAD+KYDE A
Sbjct: 114 EEATHNVDESERVRKVMENR-----SLQDEERANTVEAQLKEAQLLAEEADRKYDEVA 166
>sp|Q9GZ70|TPM_PERVI Tropomyosin OS=Perna viridis PE=2 SV=1
Length = 284
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 10/42 (23%)
Query: 29 CGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
GN ER +D LE QL EA+++AEEADKKY+E A
Sbjct: 135 SGNDER----------IDQLEKQLTEAKWIAEEADKKYEEAA 166
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
+D LE QL EA+++AEEADKKY+E
Sbjct: 141 IDQLEKQLTEAKWIAEEADKKYEEA 165
>sp|P15846|TPMM_TRICO Tropomyosin, muscle OS=Trichostrongylus colubriformis PE=1 SV=1
Length = 284
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 18 ADKKYDEVIFVCGNRERRFFPIQKYFFMD-----ALENQLKEARFLAEEADKKYDETA 70
A +K +E ER ++ F D +E QLKEA+ LAEEAD+KYDE A
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENGSFQDEERANTIEAQLKEAQMLAEEADRKYDEVA 166
>sp|Q25632|TPM_ONCVO Tropomyosin OS=Onchocerca volvulus GN=tmy-1 PE=2 SV=1
Length = 284
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 18 ADKKYDEVIFVCGNRERRFFPIQKYFFMD-----ALENQLKEARFLAEEADKKYDETA 70
A K +E ER ++ F D +E+Q KEA+ LAEEAD+KYDE A
Sbjct: 109 ATDKLEEATHTADESERVRKVMENRSFQDEERANTVESQEKEAQLLAEEADRKYDEVA 166
>sp|P42636|TPM1_BIOGL Tropomyosin-1 OS=Biomphalaria glabrata PE=2 SV=1
Length = 284
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
+D LE QLKEA+++AE+A++KYDE A
Sbjct: 141 LDGLEAQLKEAKYIAEDAERKYDEAA 166
>sp|P43689|TPM2_BIOGL Tropomyosin-2 OS=Biomphalaria glabrata PE=2 SV=1
Length = 284
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
+D LE QLKEA+++AE+A++KYDE A
Sbjct: 141 LDGLEAQLKEAKYIAEDAERKYDEAA 166
>sp|Q26503|TPM_SCHHA Tropomyosin OS=Schistosoma haematobium PE=2 SV=1
Length = 284
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 6 NQLKEARFLAEEADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKK 65
+L+EA AEE+++ G ++ I ++ LE+Q KEA+++AE+AD+K
Sbjct: 111 TKLEEASKTAEESER---------GRKDLEIRSIADDERLNQLEDQQKEAKYIAEDADRK 161
Query: 66 YDETA 70
YDE A
Sbjct: 162 YDEAA 166
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 22/25 (88%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
++ LE+Q KEA+++AE+AD+KYDE
Sbjct: 141 LNQLEDQQKEAKYIAEDADRKYDEA 165
>sp|Q26519|TPM_SCHJA Tropomyosin OS=Schistosoma japonicum PE=2 SV=1
Length = 284
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 6 NQLKEARFLAEEADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKK 65
+L+EA AEE+++ G ++ I ++ LE+Q KEA+++AE+AD+K
Sbjct: 111 TKLEEASKTAEESER---------GRKDLEIRSIADDERLNQLEDQQKEAKYIAEDADRK 161
Query: 66 YDETA 70
YDE A
Sbjct: 162 YDEAA 166
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 22/25 (88%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
++ LE+Q KEA+++AE+AD+KYDE
Sbjct: 141 LNQLEDQQKEAKYIAEDADRKYDEA 165
>sp|P42637|TPM1_SCHMA Tropomyosin-1 OS=Schistosoma mansoni PE=2 SV=1
Length = 284
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 6 NQLKEARFLAEEADKKYDEVIFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKK 65
+L+EA AEE+++ G ++ I ++ LE+Q KEA+++AE+AD+K
Sbjct: 111 TKLEEASKTAEESER---------GRKDLEIRSIADDERLNQLEDQQKEAKYIAEDADRK 161
Query: 66 YDETA 70
YDE A
Sbjct: 162 YDEAA 166
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 22/25 (88%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
++ LE+Q KEA+++AE+AD+KYDE
Sbjct: 141 LNQLEDQQKEAKYIAEDADRKYDEA 165
>sp|Q25145|TPM_HALRU Tropomyosin OS=Haliotis rufescens PE=2 SV=1
Length = 284
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
+D LE QLKEA+++AE+A++KYDE A
Sbjct: 141 IDQLEAQLKEAKYIAEDAERKYDEAA 166
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 22/25 (88%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
+D LE QLKEA+++AE+A++KYDE
Sbjct: 141 IDQLEAQLKEAKYIAEDAERKYDEA 165
>sp|Q9GZ71|TPM_HALDV Tropomyosin OS=Haliotis diversicolor PE=2 SV=1
Length = 284
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
+D LE QLKEA+++AE+A++KYDE A
Sbjct: 141 IDQLEAQLKEAKYIAEDAERKYDEAA 166
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 22/25 (88%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
+D LE QLKEA+++AE+A++KYDE
Sbjct: 141 IDQLEAQLKEAKYIAEDAERKYDEA 165
>sp|Q9NDS0|TPM_BRABE Tropomyosin OS=Branchiostoma belcheri GN=TPM PE=2 SV=1
Length = 284
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV----IFVCGNRER 34
M+ L+ QL+EA+ +AEEAD+KY+EV + G+ ER
Sbjct: 141 MELLDMQLREAKMIAEEADRKYEEVARKLVITEGDLER 178
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
M+ L+ QL+EA+ +AEEAD+KY+E A
Sbjct: 141 MELLDMQLREAKMIAEEADRKYEEVA 166
>sp|Q6IRU2|TPM4_MOUSE Tropomyosin alpha-4 chain OS=Mus musculus GN=Tpm4 PE=2 SV=3
Length = 248
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV---IFVCGNRERRFFPIQKYFFMDALENQLKEARF 57
+D + QL A EEA+K DE + V NR ++ M+ LE QLKEA+
Sbjct: 63 LDRAQEQLATALQNLEEAEKAADESERGMKVIENR-----AMKDEEKMEILEMQLKEAKH 117
Query: 58 LAEEADKKYDETA 70
+ +EAD+KY+E A
Sbjct: 118 ITDEADRKYEEVA 130
>sp|P09495|TPM4_RAT Tropomyosin alpha-4 chain OS=Rattus norvegicus GN=Tpm4 PE=1 SV=3
Length = 248
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 16 EEADKKYDEV---IFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EEA+K DE + V NR ++ M+ E QLKEA+ +AEEAD+KY+E A
Sbjct: 78 EEAEKAADESERGMKVIENR-----AMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVA 130
>sp|O97192|TPM_HELAS Tropomyosin OS=Helix aspersa PE=1 SV=1
Length = 284
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 23/26 (88%)
Query: 45 MDALENQLKEARFLAEEADKKYDETA 70
+D LE QLKEA+++AE+A++K+DE A
Sbjct: 141 LDGLEAQLKEAKYIAEDAERKFDEAA 166
>sp|Q23758|TPM_CLOSI Tropomyosin OS=Clonorchis sinensis PE=2 SV=1
Length = 284
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 30 GNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
G +E I + LE+Q KE +++AE+AD+KYDE A
Sbjct: 126 GRKELEIRSIADDEGLSQLEDQQKEGKYIAEDADRKYDEAA 166
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 1 MDALENQLKEARFLAEEADKKYDEV 25
+ LE+Q KE +++AE+AD+KYDE
Sbjct: 141 LSQLEDQQKEGKYIAEDADRKYDEA 165
>sp|P67937|TPM4_PIG Tropomyosin alpha-4 chain OS=Sus scrofa GN=TPM4 PE=2 SV=3
Length = 248
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 16 EEADKKYDEV---IFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EEA+K DE + V NR ++ M+ E QLKEA+ +AEEAD+KY+E A
Sbjct: 78 EEAEKAADESERGMKVIENR-----AMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVA 130
>sp|P67936|TPM4_HUMAN Tropomyosin alpha-4 chain OS=Homo sapiens GN=TPM4 PE=1 SV=3
Length = 248
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 16 EEADKKYDEV---IFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EEA+K DE + V NR ++ M+ E QLKEA+ +AEEAD+KY+E A
Sbjct: 78 EEAEKAADESERGMKVIENR-----AMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVA 130
>sp|P02561|TPM4_HORSE Tropomyosin alpha-4 chain OS=Equus caballus GN=TPM4 PE=1 SV=2
Length = 248
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 16 EEADKKYDEV---IFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EEA+K DE + V NR ++ M+ E QLKEA+ +AEEAD+KY+E A
Sbjct: 78 EEAEKAADESERGMKVIENR-----AMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVA 130
>sp|Q63610|TPM3_RAT Tropomyosin alpha-3 chain OS=Rattus norvegicus GN=Tpm3 PE=1 SV=2
Length = 248
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 16 EEADKKYDEV---IFVCGNRERRFFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70
EEA+K DE + V NR ++ M+ E QLKEA+ +AEEAD+KY+E A
Sbjct: 78 EEAEKAADESERGMKVIENR-----ALKDEEKMELQEIQLKEAKHIAEEADRKYEEVA 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,453,813
Number of Sequences: 539616
Number of extensions: 1068770
Number of successful extensions: 3537
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3363
Number of HSP's gapped (non-prelim): 130
length of query: 89
length of database: 191,569,459
effective HSP length: 59
effective length of query: 30
effective length of database: 159,732,115
effective search space: 4791963450
effective search space used: 4791963450
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)