Query psy13149
Match_columns 89
No_of_seqs 124 out of 290
Neff 5.9
Searched_HMMs 13730
Date Fri Aug 16 20:50:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13149.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/13149hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fxka_ a.2.5.1 (A:) Prefoldin 44.1 25 0.0018 20.0 5.6 35 40-74 69-103 (107)
2 d1yzma1 a.2.19.1 (A:456-501) F 23.1 30 0.0022 17.6 2.3 16 43-58 25-40 (46)
3 d1wu9a1 a.245.1.1 (A:191-249) 20.9 59 0.0043 17.1 4.5 34 44-77 2-35 (59)
4 d2azeb1 e.63.1.2 (B:201-301) T 19.7 79 0.0058 18.0 4.6 11 44-54 23-33 (101)
5 d1ykha1 a.252.1.2 (A:111-205) 16.3 74 0.0054 18.2 3.4 27 2-28 66-92 (95)
6 d1bf5a1 a.47.1.1 (A:136-316) S 10.3 1.6E+02 0.012 18.3 4.0 35 36-70 9-43 (181)
7 d1bg1a1 a.47.1.1 (A:136-321) S 6.6 3E+02 0.022 17.0 4.2 32 37-68 12-43 (186)
8 d1bhua_ b.11.1.3 (A:) Streptom 6.3 61 0.0045 18.3 0.3 7 82-88 64-70 (102)
9 d3buxb3 d.93.1.1 (B:264-351) C 6.2 1.4E+02 0.01 16.7 1.9 24 66-89 11-36 (88)
10 d1ow1a_ b.131.1.3 (A:) SMART/H 5.9 77 0.0056 20.0 0.7 24 65-88 65-88 (170)
No 1
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=44.14 E-value=25 Score=20.02 Aligned_cols=35 Identities=17% Similarity=-0.010 Sum_probs=24.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHh
Q psy13149 40 QKYFFMDALENQLKEARFLAEEADKKYDETAGVKG 74 (89)
Q Consensus 40 ~~Ee~l~~le~qLKea~~~aeead~Kyde~arkL~ 74 (89)
.+.++++.++..++.+.........+++++..+|.
T Consensus 69 ~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 69 ELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777777777777777777777777776654
No 2
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.13 E-value=30 Score=17.59 Aligned_cols=16 Identities=13% Similarity=0.048 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHH
Q psy13149 43 FFMDALENQLKEARFL 58 (89)
Q Consensus 43 e~l~~le~qLKea~~~ 58 (89)
+++.+|+.+|++++..
T Consensus 25 dEV~~Le~NLreLq~e 40 (46)
T d1yzma1 25 DEVRTLQENLRQLQDE 40 (46)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5677889999887643
No 3
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.91 E-value=59 Score=17.06 Aligned_cols=34 Identities=18% Similarity=0.105 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhc
Q psy13149 44 FMDALENQLKEARFLAEEADKKYDETAGVKGLFS 77 (89)
Q Consensus 44 ~l~~le~qLKea~~~aeead~Kyde~arkL~ile 77 (89)
++..|..++.+++...+...+--|=|=.||..++
T Consensus 2 e~~~L~~ei~elk~~v~~lEkERdFYF~KLRdIE 35 (59)
T d1wu9a1 2 EAAELMQQVNVLKLTVEDLEKERDFYFGKLRNIE 35 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556777777777777777777777888877766
No 4
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.66 E-value=79 Score=18.03 Aligned_cols=11 Identities=27% Similarity=0.401 Sum_probs=4.3
Q ss_pred HHHHHHHHHHH
Q psy13149 44 FMDALENQLKE 54 (89)
Q Consensus 44 ~l~~le~qLKe 54 (89)
-+..+..+|+.
T Consensus 23 li~~~~~~L~~ 33 (101)
T d2azeb1 23 LMNICTTQLRL 33 (101)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333444433
No 5
>d1ykha1 a.252.1.2 (A:111-205) RNA polymerase II mediator complex protein MED7 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=16.27 E-value=74 Score=18.16 Aligned_cols=27 Identities=26% Similarity=0.094 Sum_probs=17.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhHHhh
Q psy13149 2 DALENQLKEARFLAEEADKKYDEVIFV 28 (89)
Q Consensus 2 ~~lE~~L~~a~~~~eeA~~k~eEv~~k 28 (89)
.++|.|+++.+...+..++..+.+...
T Consensus 66 ~lme~Ql~~kr~~~~~i~~~~~~~~~~ 92 (95)
T d1ykha1 66 MLLEEQLEYKRGEIREIEQVCKQVHDK 92 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777777777766666666665443
No 6
>d1bf5a1 a.47.1.1 (A:136-316) STAT-1, coiled coil domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.32 E-value=1.6e+02 Score=18.26 Aligned_cols=35 Identities=17% Similarity=-0.007 Sum_probs=20.6
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q psy13149 36 FFPIQKYFFMDALENQLKEARFLAEEADKKYDETA 70 (89)
Q Consensus 36 ~r~~~~Ee~l~~le~qLKea~~~aeead~Kyde~a 70 (89)
++...+-.++..+++.+|.++-.-++.|-+|..+.
T Consensus 9 ~~v~~l~~~vq~~e~~ik~Led~Qd~fdf~yktlq 43 (181)
T d1bf5a1 9 SKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTLQ 43 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555566666666666666666665544
No 7
>d1bg1a1 a.47.1.1 (A:136-321) STAT3b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.55 E-value=3e+02 Score=16.96 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=18.1
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q psy13149 37 FPIQKYFFMDALENQLKEARFLAEEADKKYDE 68 (89)
Q Consensus 37 r~~~~Ee~l~~le~qLKea~~~aeead~Kyde 68 (89)
+...+..+...+++.++.++..-++.|-+|..
T Consensus 12 ~v~~l~~~~q~~e~~ik~Le~~Qe~f~f~yk~ 43 (186)
T d1bg1a1 12 HLQDVRKRVQDLEQKMKVVENLQDDFDFNYKT 43 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445555566666666666666666643
No 8
>d1bhua_ b.11.1.3 (A:) Streptomyces metalloproteinase inhibitor, SMPI {Streptomyces nigrescens [TaxId: 1920]}
Probab=6.32 E-value=61 Score=18.34 Aligned_cols=7 Identities=57% Similarity=1.288 Sum_probs=4.5
Q ss_pred hhcccCC
Q psy13149 82 VVRLPCK 88 (89)
Q Consensus 82 ~~~~~~~ 88 (89)
-||+||-
T Consensus 64 cvrfpcy 70 (102)
T d1bhua_ 64 CVRFPCY 70 (102)
T ss_dssp CSSSCCC
T ss_pred EEeecce
Confidence 4677773
No 9
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.23 E-value=1.4e+02 Score=16.71 Aligned_cols=24 Identities=33% Similarity=0.517 Sum_probs=14.7
Q ss_pred HHHHHHHHhhhccc--chhhcccCCC
Q psy13149 66 YDETAGVKGLFSPI--RAVVRLPCKR 89 (89)
Q Consensus 66 yde~arkL~ile~~--~~~~~~~~~~ 89 (89)
||||..+|.-.-+- --++||.|.|
T Consensus 11 YDevk~rL~~~~~kPGSYiFRlSCTr 36 (88)
T d3buxb3 11 YDEVKARLQKFIHKPGSYIFRLSCTR 36 (88)
T ss_dssp HHHHHHHHGGGTTSTTEEEEEECSSS
T ss_pred HHHHHHHHHHHhcCCCceEEeecccc
Confidence 77777776544321 2357888875
No 10
>d1ow1a_ b.131.1.3 (A:) SMART/HDAC1 associated repressor protein, SHARP {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.93 E-value=77 Score=19.99 Aligned_cols=24 Identities=17% Similarity=0.278 Sum_probs=15.3
Q ss_pred hHHHHHHHHhhhcccchhhcccCC
Q psy13149 65 KYDETAGVKGLFSPIRAVVRLPCK 88 (89)
Q Consensus 65 Kyde~arkL~ile~~~~~~~~~~~ 88 (89)
|.|+|.|++..-.+---.+-|||.
T Consensus 65 kLe~V~rRi~~~~~~c~lLAlp~~ 88 (170)
T d1ow1a_ 65 QLEGVARRMTVETDYCLLLALPCG 88 (170)
T ss_dssp HHHHHHHHTSSTTTEEEEEEEECC
T ss_pred HHHHHHHHHhcCCCceEEEEeeCC
Confidence 567788888655554445566664
Done!