RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13164
         (193 letters)



>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 53

 Score = 37.4 bits (86), Expect = 5e-05
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQG-IRYKCNLCSKEFLRKDILIEHKKIH 184
           Y C  C K + HK     H  +H G   Y C +C K+F  K  L+ H KIH
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53



 Score = 36.6 bits (84), Expect = 1e-04
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG-IRYKCDLCSKEYFHKGYLTDHKKIH 157
           Y C  C K + HK     H   H G   Y C +C K++  K +L  H KIH
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53



 Score = 24.3 bits (52), Expect = 2.5
 Identities = 9/28 (32%), Positives = 12/28 (42%)

Query: 103 HRGIRYKCDLCSKEYFHKGSLTEHKKRH 130
                Y C +C K++  K  L  H K H
Sbjct: 26  LGLRPYGCGVCGKKFKMKHHLVGHMKIH 53


>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 33

 Score = 34.9 bits (81), Expect = 3e-04
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)

Query: 156 IHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
           IH G + Y C  C K F R  IL++H+++H G
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32



 Score = 31.1 bits (71), Expect = 0.007
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQG 159
           Y C  C K +     L  H+++H G
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVHTG 32



 Score = 29.5 bits (67), Expect = 0.025
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG 132
           Y C  C K +     L +H++ H G
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVHTG 32


>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 33.5 bits (77), Expect = 9e-04
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 155 KIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGIRF 189
           + H G + Y C+ C K F +K +L  H K +    F
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36



 Score = 29.3 bits (66), Expect = 0.029
 Identities = 8/28 (28%), Positives = 11/28 (39%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQGIRY 162
           Y C  C K +  K  L  H K +    +
Sbjct: 9   YACSHCDKTFRQKQLLDMHFKRYHDPNF 36



 Score = 28.5 bits (64), Expect = 0.056
 Identities = 9/28 (32%), Positives = 12/28 (42%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGIRY 135
           Y C  C K +  K  L  H KR+    +
Sbjct: 9   YACSHCDKTFRQKQLLDMHFKRYHDPNF 36


>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
           10090]}
          Length = 28

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQG 186
           ++C +C + F R D L  H + H G
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG 28



 Score = 30.3 bits (69), Expect = 0.012
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQG 159
           ++C +C + +    +LT H + H G
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG 28



 Score = 28.7 bits (65), Expect = 0.039
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG 132
           ++C +C + +     LT H + H G
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG 28


>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
           protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 38

 Score = 33.2 bits (76), Expect = 0.001
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
            +   +  R YKC+ C K F     L +H++ H G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37



 Score = 30.5 bits (69), Expect = 0.012
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQG 159
            + + +  R YKCD C K + H   L+ H++ H G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37



 Score = 25.1 bits (55), Expect = 0.90
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 100 KILHRGIR-YKCDLCSKEYFHKGSLTEHKKRHQG 132
           +   R  R YKCD C K + H   L++H++ H G
Sbjct: 4   EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37


>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 37

 Score = 32.8 bits (75), Expect = 0.002
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 153 HKKIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQGI 187
             +   GI+ ++C  C + F R D L  H+K H  +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37



 Score = 28.9 bits (65), Expect = 0.037
 Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 126 HKKRHQGIR-YKCDLCSKEYFHKGYLTDHKKIHQGI 160
             +   GI+ ++C  C + +    +L  H+K H  +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37



 Score = 25.8 bits (57), Expect = 0.45
 Identities = 7/26 (26%), Positives = 13/26 (50%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQGI 133
           ++C  C + +     L  H+KRH  +
Sbjct: 12  FQCPDCDRSFSRSDHLALHRKRHMLV 37


>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
           Saccharomyces cerevisiae sequence}
          Length = 29

 Score = 31.8 bits (73), Expect = 0.003
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQG 186
           + C +C++ F R++ L  H + H  
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTN 27



 Score = 29.5 bits (67), Expect = 0.023
 Identities = 5/25 (20%), Positives = 14/25 (56%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQG 159
           + C++C++ +  + +L  H + H  
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTN 27



 Score = 27.6 bits (62), Expect = 0.097
 Identities = 5/25 (20%), Positives = 13/25 (52%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG 132
           + C++C++ +  +  L  H + H  
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTN 27


>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 26

 Score = 31.4 bits (72), Expect = 0.005
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIH 184
           YKC  C K F +   LI H++IH
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIH 25



 Score = 27.9 bits (63), Expect = 0.083
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIH 157
           YKC  C K +     L +H++IH
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIH 25



 Score = 25.6 bits (57), Expect = 0.44
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRH 130
           YKC  C K +     L  H++ H
Sbjct: 3   YKCLECGKAFSQNSGLINHQRIH 25


>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 39

 Score = 31.1 bits (71), Expect = 0.006
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 162 YKCNLCSKEFLRKDILIEH-KKIHQGIR-FKCDL 193
           Y C  C K F R D L  H K++H   R  KC +
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39



 Score = 30.7 bits (70), Expect = 0.009
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKR-HQGIR-YKCDL 139
           Y C  C K +     L  H K+ H   R +KC +
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39



 Score = 29.6 bits (67), Expect = 0.022
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 135 YKCDLCSKEYFHKGYLTDH-KKIHQGIR-YKCNL 166
           Y C  C K +    +L  H K++H   R +KC +
Sbjct: 6   YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39


>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 29

 Score = 30.8 bits (70), Expect = 0.008
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQG 186
           + C  C K F+R D L +H K HQ 
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQN 27



 Score = 29.2 bits (66), Expect = 0.031
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQG 159
           + C  C K +    +L+ H K HQ 
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQN 27



 Score = 27.7 bits (62), Expect = 0.11
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG 132
           + C  C K +     L++H K HQ 
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQN 27


>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 30.1 bits (68), Expect = 0.015
 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 3/34 (8%)

Query: 162 YKCN--LCSKEFLRKDILIEHKKIHQGIR-FKCD 192
           + C    C K F  K  L EH K+H   R + C+
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35



 Score = 27.8 bits (62), Expect = 0.092
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 3/33 (9%)

Query: 135 YKCD--LCSKEYFHKGYLTDHKKIHQGIR-YKC 164
           + C    C K +  K +L +H K+H   R Y C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34



 Score = 27.4 bits (61), Expect = 0.14
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 3/34 (8%)

Query: 108 YKCD--LCSKEYFHKGSLTEHKKRHQGIR-YKCD 138
           + C    C K +  K  L EH K H   R Y C+
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35


>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
           10090]}
          Length = 29

 Score = 28.8 bits (65), Expect = 0.033
 Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 2/27 (7%)

Query: 162 YKCN--LCSKEFLRKDILIEHKKIHQG 186
           Y C    C + F R   L  H +IH G
Sbjct: 3   YACPVESCDRRFSRSADLTRHIRIHTG 29



 Score = 26.1 bits (58), Expect = 0.38
 Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)

Query: 135 YKCD--LCSKEYFHKGYLTDHKKIHQG 159
           Y C    C + +     LT H +IH G
Sbjct: 3   YACPVESCDRRFSRSADLTRHIRIHTG 29



 Score = 24.6 bits (54), Expect = 1.4
 Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 2/27 (7%)

Query: 108 YKCD--LCSKEYFHKGSLTEHKKRHQG 132
           Y C    C + +     LT H + H G
Sbjct: 3   YACPVESCDRRFSRSADLTRHIRIHTG 29


>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
           Saccharomyces cerevisiae sequence}
          Length = 31

 Score = 29.0 bits (65), Expect = 0.033
 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)

Query: 162 YKCNLCSKEFLRKDILIEH-KKIHQG 186
           Y C LC++ F R+D+LI H +KIH G
Sbjct: 2   YPCGLCNRAFTRRDLLIRHAQKIHSG 27


>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 35

 Score = 29.0 bits (65), Expect = 0.037
 Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 1/29 (3%)

Query: 157 HQGIR-YKCNLCSKEFLRKDILIEHKKIH 184
             G R + C +C   F  K     H K+H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30



 Score = 26.6 bits (59), Expect = 0.27
 Identities = 8/29 (27%), Positives = 12/29 (41%), Gaps = 1/29 (3%)

Query: 130 HQGIR-YKCDLCSKEYFHKGYLTDHKKIH 157
             G R + C +C   +  K     H K+H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30



 Score = 24.7 bits (54), Expect = 1.2
 Identities = 8/29 (27%), Positives = 12/29 (41%), Gaps = 1/29 (3%)

Query: 103 HRGIR-YKCDLCSKEYFHKGSLTEHKKRH 130
             G R + C +C   +  K +   H K H
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVH 30


>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 36

 Score = 28.8 bits (65), Expect = 0.042
 Identities = 5/25 (20%), Positives = 11/25 (44%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG 132
           Y+C +C   +   G++  H  +   
Sbjct: 9   YECYICHARFTQSGTMKMHILQKHT 33



 Score = 28.8 bits (65), Expect = 0.047
 Identities = 7/33 (21%), Positives = 13/33 (39%), Gaps = 1/33 (3%)

Query: 155 KIHQGIR-YKCNLCSKEFLRKDILIEHKKIHQG 186
           + H G + Y+C +C   F +   +  H      
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHT 33



 Score = 25.3 bits (56), Expect = 0.87
 Identities = 5/25 (20%), Positives = 9/25 (36%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQG 159
           Y+C +C   +   G +  H      
Sbjct: 9   YECYICHARFTQSGTMKMHILQKHT 33


>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 30

 Score = 28.5 bits (64), Expect = 0.046
 Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 162 YKCN--LCSKEFLRKDILIEHKKIHQG 186
           +KC    C K + R + L  H + H G
Sbjct: 3   HKCTFEGCRKSYSRLENLKTHLRSHTG 29



 Score = 26.5 bits (59), Expect = 0.25
 Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 2/27 (7%)

Query: 135 YKCD--LCSKEYFHKGYLTDHKKIHQG 159
           +KC    C K Y     L  H + H G
Sbjct: 3   HKCTFEGCRKSYSRLENLKTHLRSHTG 29



 Score = 24.6 bits (54), Expect = 1.2
 Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)

Query: 108 YKCD--LCSKEYFHKGSLTEHKKRHQG 132
           +KC    C K Y    +L  H + H G
Sbjct: 3   HKCTFEGCRKSYSRLENLKTHLRSHTG 29


>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 31

 Score = 27.7 bits (62), Expect = 0.097
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)

Query: 162 YKCNL--CSKEFLRKDILIEHKKIHQG 186
           + C    C K F R D L  HK+ H G
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTG 29



 Score = 25.4 bits (56), Expect = 0.65
 Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 2/27 (7%)

Query: 135 YKCDL--CSKEYFHKGYLTDHKKIHQG 159
           + C    C K +     L  HK+ H G
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTG 29



 Score = 23.8 bits (52), Expect = 2.8
 Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 2/27 (7%)

Query: 108 YKCDL--CSKEYFHKGSLTEHKKRHQG 132
           + C    C K +     L  HK+ H G
Sbjct: 3   FMCTWSYCGKRFTRSDELQRHKRTHTG 29


>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
           peptide) {Drosophila melanogaster [TaxId: 7227]}
          Length = 26

 Score = 26.9 bits (59), Expect = 0.16
 Identities = 12/22 (54%), Positives = 13/22 (59%)

Query: 162 YKCNLCSKEFLRKDILIEHKKI 183
           Y C  C KEF RKD +  H KI
Sbjct: 2   YPCPFCFKEFTRKDNMTAHVKI 23


>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
           8355]}
          Length = 26

 Score = 26.6 bits (58), Expect = 0.24
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQ 185
           YKC LC + F+ K  L  H+++H+
Sbjct: 1   YKCGLCERSFVEKSALSRHQRVHK 24



 Score = 25.5 bits (55), Expect = 0.69
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 135 YKCDLCSKEYFHKGYLTDHKKIHQ 158
           YKC LC + +  K  L+ H+++H+
Sbjct: 1   YKCGLCERSFVEKSALSRHQRVHK 24



 Score = 25.1 bits (54), Expect = 0.83
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQ 131
           YKC LC + +  K +L+ H++ H+
Sbjct: 1   YKCGLCERSFVEKSALSRHQRVHK 24


>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 30

 Score = 26.6 bits (59), Expect = 0.25
 Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)

Query: 162 YKCN--LCSKEFLRKDILIEHKKIHQG 186
           ++C    C K F     L  H +IH G
Sbjct: 3   FQCTFEGCGKRFSLDFNLRTHVRIHTG 29



 Score = 24.6 bits (54), Expect = 1.1
 Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 2/27 (7%)

Query: 135 YKCD--LCSKEYFHKGYLTDHKKIHQG 159
           ++C    C K +     L  H +IH G
Sbjct: 3   FQCTFEGCGKRFSLDFNLRTHVRIHTG 29



 Score = 23.5 bits (51), Expect = 3.5
 Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 2/27 (7%)

Query: 108 YKCD--LCSKEYFHKGSLTEHKKRHQG 132
           ++C    C K +    +L  H + H G
Sbjct: 3   FQCTFEGCGKRFSLDFNLRTHVRIHTG 29


>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 32

 Score = 26.1 bits (58), Expect = 0.34
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 162 YKCN--LCSKEFLRKDILIEHKKIHQG 186
           Y C+   C K F+R   LI HKK HQ 
Sbjct: 4   YSCDHPGCDKAFVRNHDLIRHKKSHQE 30



 Score = 23.1 bits (50), Expect = 4.8
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 2/27 (7%)

Query: 135 YKCD--LCSKEYFHKGYLTDHKKIHQG 159
           Y CD   C K +     L  HKK HQ 
Sbjct: 4   YSCDHPGCDKAFVRNHDLIRHKKSHQE 30


>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 47

 Score = 25.3 bits (55), Expect = 1.0
 Identities = 7/46 (15%), Positives = 16/46 (34%), Gaps = 2/46 (4%)

Query: 118 FHKGSLTEHKKRHQGIRYKCDLCSKEYF--HKGYLTDHKKIHQGIR 161
             +GS+ ++ K      ++C           +  +  H + H   R
Sbjct: 2   LPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47



 Score = 23.7 bits (51), Expect = 3.7
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 145 FHKGYLTDHKKIHQGIRYKCNLC--SKEFLRKDILIEHKKIHQGIR 188
             +G +  + K      ++C     +K F R+  +  H + H   R
Sbjct: 2   LPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47


>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 26

 Score = 24.6 bits (53), Expect = 1.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQG 186
           +KC +C K F RKD L  H + H G
Sbjct: 2   HKCEVCGKCFSRKDKLKTHMRCHTG 26



 Score = 22.3 bits (47), Expect = 7.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG 132
           +KC++C K +  K  L  H + H G
Sbjct: 2   HKCEVCGKCFSRKDKLKTHMRCHTG 26


>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
           10090]}
          Length = 28

 Score = 24.4 bits (53), Expect = 1.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQ 185
           + C++C ++F R D    H KIH 
Sbjct: 4   FACDICGRKFARSDERKRHTKIHL 27


>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 44

 Score = 23.9 bits (51), Expect = 2.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 162 YKCNLCSKEFLRKDILIEHK 181
           Y+CN+C+K F+ +D    H 
Sbjct: 6   YECNICAKRFMWRDSFHRHV 25


>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 28

 Score = 23.9 bits (51), Expect = 2.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRH 130
           ++C  C K YF K +L EH+ R+
Sbjct: 2   FECPKCGKCYFRKENLLEHEARN 24


>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 32

 Score = 23.8 bits (51), Expect = 2.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQG 186
           Y C +C   F RKD +  H + H G
Sbjct: 4   YSCPVCGLRFKRKDRMSYHVRSHDG 28


>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 29

 Score = 23.1 bits (49), Expect = 4.3
 Identities = 8/25 (32%), Positives = 12/25 (48%)

Query: 108 YKCDLCSKEYFHKGSLTEHKKRHQG 132
           +KC +C     +   LT H + H G
Sbjct: 4   FKCQICPYASRNSSQLTVHLRSHTG 28


>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 28

 Score = 23.1 bits (50), Expect = 4.6
 Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 2/25 (8%)

Query: 162 YKCNL--CSKEFLRKDILIEHKKIH 184
           Y C    C+K+F +   L  H   H
Sbjct: 3   YVCPFDGCNKKFAQSTNLKSHILTH 27


>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 37

 Score = 22.7 bits (49), Expect = 5.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 162 YKCNLCSKEFLRKDILIEHKKIHQGIR 188
           Y C+ C +EF     L  H  +H+  R
Sbjct: 6   YTCSFCKREFRSAQALGGHMNVHRRDR 32


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.137    0.417 

Gapped
Lambda     K      H
   0.267   0.0611    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 733,659
Number of extensions: 34740
Number of successful extensions: 231
Number of sequences better than 10.0: 1
Number of HSP's gapped: 227
Number of HSP's successfully gapped: 114
Length of query: 193
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 112
Effective length of database: 1,295,466
Effective search space: 145092192
Effective search space used: 145092192
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.3 bits)