Your job contains 1 sequence.
>psy13169
MALPTFCGVHFVVPEGDGTLVDRNAHLFTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPH
ENSARLWFPCIDTYSEVCTWRLEFTVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPA
PAPSLEIYQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13169
(129 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-3207 - symbol:taf2 "TAF2 RNA polymer... 331 1.4e-28 1
UNIPROTKB|E1BY72 - symbol:E1BY72 "Uncharacterized protein... 321 2.5e-28 1
UNIPROTKB|E2QT19 - symbol:TAF2 "Uncharacterized protein" ... 327 3.7e-28 1
UNIPROTKB|K7GP24 - symbol:TAF2 "Uncharacterized protein" ... 326 4.1e-28 1
UNIPROTKB|F1S282 - symbol:TAF2 "Uncharacterized protein" ... 326 4.2e-28 1
MGI|MGI:2443028 - symbol:Taf2 "TAF2 RNA polymerase II, TA... 326 4.2e-28 1
UNIPROTKB|Q6P1X5 - symbol:TAF2 "Transcription initiation ... 326 4.8e-28 1
UNIPROTKB|F1MME0 - symbol:TAF2 "Uncharacterized protein" ... 326 4.8e-28 1
UNIPROTKB|F6UTN8 - symbol:TAF2 "Uncharacterized protein" ... 326 4.8e-28 1
UNIPROTKB|F1LNY6 - symbol:Taf2 "Protein Taf2" species:101... 323 1.0e-27 1
UNIPROTKB|Q5ZIT8 - symbol:TAF2 "Transcription initiation ... 321 1.6e-27 1
FB|FBgn0011836 - symbol:Taf2 "TBP-associated factor 2" sp... 313 1.2e-26 1
DICTYBASE|DDB_G0292724 - symbol:taf2 "TFIID subunit" spec... 181 2.6e-12 1
TAIR|locus:2031571 - symbol:TAF2 "TBP-associated factor 2... 143 1.9e-08 1
POMBASE|SPAC3A12.05c - symbol:taf2 "TATA-binding protein ... 82 0.00017 2
>ZFIN|ZDB-GENE-030131-3207 [details] [associations]
symbol:taf2 "TAF2 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR014782 Pfam:PF01433
ZFIN:ZDB-GENE-030131-3207 GO:GO:0005634 GO:GO:0006355 GO:GO:0008270
GO:GO:0008237 GO:GO:0006351 eggNOG:COG0308 HOVERGEN:HBG094022
EMBL:AY648781 EMBL:BC076415 EMBL:BC091664 EMBL:BC107957
IPI:IPI00508952 RefSeq:NP_001003835.1 UniGene:Dr.20641
ProteinModelPortal:Q32PW3 STRING:Q32PW3 Ensembl:ENSDART00000056072
GeneID:324486 KEGG:dre:324486 CTD:6873 GeneTree:ENSGT00390000000420
HOGENOM:HOG000046103 InParanoid:Q32PW3 KO:K03128 OMA:PCVDSFA
OrthoDB:EOG46HG8V NextBio:20808797 Uniprot:Q32PW3
Length = 1191
Score = 331 (121.6 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 57/113 (50%), Positives = 82/113 (72%)
Query: 15 EGDGTLVDRNAHLFTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTY 74
+GD V + F+ G+HFVVP+ +G + +R AH+F+ ++NS+R WFPC+D+Y
Sbjct: 126 QGDEMKVMKVYIEFSLDQPKGGLHFVVPDVEGNMAERAAHVFSFGNQNSSRFWFPCVDSY 185
Query: 75 SEVCTWRLEFTVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
SE+CTW+LEFTVD ++ AVSCGDL+E VYT DMR+KT+ Y L IP AP++ +
Sbjct: 186 SELCTWKLEFTVDASMVAVSCGDLVETVYTHDMRKKTYHYMLPIPTAAPNISM 238
>UNIPROTKB|E1BY72 [details] [associations]
symbol:E1BY72 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008237 "metallopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR014782 Pfam:PF01433 GO:GO:0008270 GO:GO:0008237
GeneTree:ENSGT00390000000420 EMBL:AADN02022570 EMBL:AADN02022571
EMBL:AADN02022572 EMBL:AADN02022573 EMBL:AADN02022574
EMBL:AADN02022575 EMBL:AADN02022576 EMBL:AADN02022577
EMBL:AADN02022578 EMBL:AADN02022579 EMBL:AADN02022580
IPI:IPI00818144 Ensembl:ENSGALT00000026492 ArrayExpress:E1BY72
Uniprot:E1BY72
Length = 553
Score = 321 (118.1 bits), Expect = 2.5e-28, P = 2.5e-28
Identities = 54/103 (52%), Positives = 76/103 (73%)
Query: 26 HL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEF 84
H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YSE+CTW+LE+
Sbjct: 138 HINFSLDQPKGGLHFVVPNMEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEY 197
Query: 85 TVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
TVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 198 TVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLAIPTAASNISL 240
>UNIPROTKB|E2QT19 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
Ensembl:ENSCAFT00000001363 GO:GO:0008237 GO:GO:0008270
InterPro:IPR016024 InterPro:IPR014782 Pfam:PF01433 SUPFAM:SSF48371
Uniprot:E2QT19
Length = 1202
Score = 327 (120.2 bits), Expect = 3.7e-28, P = 3.7e-28
Identities = 57/112 (50%), Positives = 78/112 (69%)
Query: 17 DGTLVDRNAHL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYS 75
D L H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YS
Sbjct: 139 DAELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYS 198
Query: 76 EVCTWRLEFTVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
E+CTW+LEFTVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 199 ELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISL 250
>UNIPROTKB|K7GP24 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] InterPro:IPR014782
InterPro:IPR016024 Pfam:PF01433 SUPFAM:SSF48371
GeneTree:ENSGT00390000000420 EMBL:CU467749 EMBL:CU326377
Ensembl:ENSSSCT00000033583 Uniprot:K7GP24
Length = 1100
Score = 326 (119.8 bits), Expect = 4.1e-28, P = 4.1e-28
Identities = 55/103 (53%), Positives = 76/103 (73%)
Query: 26 HL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEF 84
H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YSE+CTW+LEF
Sbjct: 48 HINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEF 107
Query: 85 TVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
TVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 108 TVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISL 150
>UNIPROTKB|F1S282 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 GO:GO:0000086
SUPFAM:SSF48371 GO:GO:0008270 GO:GO:0045944 GO:GO:0008237
GO:GO:0044212 GO:GO:0006367 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00390000000420 OMA:PCVDSFA EMBL:CU467749
EMBL:CU326377 Ensembl:ENSSSCT00000006583 ArrayExpress:F1S282
Uniprot:F1S282
Length = 1101
Score = 326 (119.8 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 55/103 (53%), Positives = 76/103 (73%)
Query: 26 HL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEF 84
H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YSE+CTW+LEF
Sbjct: 48 HINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEF 107
Query: 85 TVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
TVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 108 TVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISL 150
>MGI|MGI:2443028 [details] [associations]
symbol:Taf2 "TAF2 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=ISO;ISA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] InterPro:IPR014782
InterPro:IPR016024 Pfam:PF01433 MGI:MGI:2443028 SUPFAM:SSF48371
GO:GO:0006355 GO:GO:0008270 GO:GO:0008237 GO:GO:0006351
eggNOG:COG0308 GO:GO:0005669 MEROPS:M01.972 HOVERGEN:HBG094022
OrthoDB:EOG46HG8V ChiTaRS:TAF2 EMBL:AC137950 EMBL:AK028828
EMBL:AK051126 IPI:IPI00658461 UniGene:Mm.380957
ProteinModelPortal:Q8C176 STRING:Q8C176 PhosphoSite:Q8C176
PRIDE:Q8C176 InParanoid:Q8C176 Genevestigator:Q8C176
GermOnline:ENSMUSG00000037343 Uniprot:Q8C176
Length = 1104
Score = 326 (119.8 bits), Expect = 4.2e-28, P = 4.2e-28
Identities = 55/103 (53%), Positives = 76/103 (73%)
Query: 26 HL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEF 84
H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YSE+CTW+LEF
Sbjct: 137 HINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEF 196
Query: 85 TVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
TVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 197 TVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISL 239
>UNIPROTKB|Q6P1X5 [details] [associations]
symbol:TAF2 "Transcription initiation factor TFIID subunit
2" species:9606 "Homo sapiens" [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] InterPro:IPR014782
InterPro:IPR016024 Pfam:PF01433 GO:GO:0000086 SUPFAM:SSF48371
GO:GO:0008270 GO:GO:0045944 GO:GO:0008237 eggNOG:COG0308
GO:GO:0044212 GO:GO:0014070 GO:GO:0006367 GO:GO:0005669
EMBL:AC107960 GO:GO:0033276 MEROPS:M01.972 HOVERGEN:HBG094022
CTD:6873 KO:K03128 OMA:PCVDSFA OrthoDB:EOG46HG8V EMBL:AF026445
EMBL:AF040701 EMBL:AF057694 EMBL:AK316592 EMBL:AC021945
EMBL:BC035673 EMBL:BC047732 EMBL:BC064830 IPI:IPI00328144
RefSeq:NP_003175.1 UniGene:Hs.122752 ProteinModelPortal:Q6P1X5
IntAct:Q6P1X5 STRING:Q6P1X5 PhosphoSite:Q6P1X5 DMDM:145559533
PaxDb:Q6P1X5 PRIDE:Q6P1X5 DNASU:6873 Ensembl:ENST00000378164
GeneID:6873 KEGG:hsa:6873 UCSC:uc003you.3 GeneCards:GC08M120812
HGNC:HGNC:11536 MIM:604912 neXtProt:NX_Q6P1X5 PharmGKB:PA36311
InParanoid:Q6P1X5 ChiTaRS:TAF2 GenomeRNAi:6873 NextBio:26833
ArrayExpress:Q6P1X5 Bgee:Q6P1X5 CleanEx:HS_TAF2
Genevestigator:Q6P1X5 GermOnline:ENSG00000064313 Uniprot:Q6P1X5
Length = 1199
Score = 326 (119.8 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 55/103 (53%), Positives = 76/103 (73%)
Query: 26 HL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEF 84
H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YSE+CTW+LEF
Sbjct: 147 HINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEF 206
Query: 85 TVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
TVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 207 TVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISL 249
>UNIPROTKB|F1MME0 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 GO:GO:0000086
SUPFAM:SSF48371 GO:GO:0008270 GO:GO:0045944 GO:GO:0008237
GO:GO:0044212 GO:GO:0006367 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00390000000420 OMA:PCVDSFA EMBL:DAAA02039690
EMBL:DAAA02039691 IPI:IPI00923924 Ensembl:ENSBTAT00000061330
Uniprot:F1MME0
Length = 1202
Score = 326 (119.8 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 55/103 (53%), Positives = 76/103 (73%)
Query: 26 HL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEF 84
H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YSE+CTW+LEF
Sbjct: 147 HINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEF 206
Query: 85 TVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
TVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 207 TVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTSASNISL 249
>UNIPROTKB|F6UTN8 [details] [associations]
symbol:TAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 SUPFAM:SSF48371
GO:GO:0008270 GO:GO:0008237 GeneTree:ENSGT00390000000420
Ensembl:ENSCAFT00000001363 EMBL:AAEX03008768 OMA:CFCLAKX
Uniprot:F6UTN8
Length = 1206
Score = 326 (119.8 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 55/103 (53%), Positives = 76/103 (73%)
Query: 26 HL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEF 84
H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YSE+CTW+LEF
Sbjct: 147 HINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEF 206
Query: 85 TVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
TVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 207 TVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISL 249
>UNIPROTKB|F1LNY6 [details] [associations]
symbol:Taf2 "Protein Taf2" species:10116 "Rattus
norvegicus" [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 RGD:621487
GO:GO:0000086 SUPFAM:SSF48371 GO:GO:0008270 GO:GO:0045944
GO:GO:0008237 GO:GO:0044212 GO:GO:0006367 GO:GO:0005669
GO:GO:0033276 CTD:6873 GeneTree:ENSGT00390000000420 KO:K03128
IPI:IPI00366255 RefSeq:NP_579853.1 UniGene:Rn.33143
Ensembl:ENSRNOT00000040836 GeneID:170844 KEGG:rno:170844
NextBio:621269 ArrayExpress:F1LNY6 Uniprot:F1LNY6
Length = 1200
Score = 323 (118.8 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 55/103 (53%), Positives = 76/103 (73%)
Query: 26 HL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEF 84
H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YSE+CTW+LEF
Sbjct: 147 HINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEF 206
Query: 85 TVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
TVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 207 TVDAAMVAVSNGDLVETVYTHDMRKKTFHYVLAIPTAASNISL 249
>UNIPROTKB|Q5ZIT8 [details] [associations]
symbol:TAF2 "Transcription initiation factor TFIID subunit
2" species:9031 "Gallus gallus" [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR014782 InterPro:IPR016024 Pfam:PF01433 GO:GO:0005634
SUPFAM:SSF48371 GO:GO:0006355 GO:GO:0008270 GO:GO:0008237
GO:GO:0006351 EMBL:AJ720696 IPI:IPI00583186 UniGene:Gga.21373
ProteinModelPortal:Q5ZIT8 MEROPS:M01.972 PRIDE:Q5ZIT8
HOVERGEN:HBG094022 Uniprot:Q5ZIT8
Length = 1168
Score = 321 (118.1 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 54/103 (52%), Positives = 76/103 (73%)
Query: 26 HL-FTCPHENSGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEF 84
H+ F+ G+HFVVP +G++ +R AH+F+C ++NS R WFPC+D+YSE+CTW+LE+
Sbjct: 137 HINFSLDQPKGGLHFVVPNMEGSMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEY 196
Query: 85 TVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
TVD + AVS GDL+E VYT DMR+KTF Y L IP A ++ +
Sbjct: 197 TVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLAIPTAASNISL 239
>FB|FBgn0011836 [details] [associations]
symbol:Taf2 "TBP-associated factor 2" species:7227
"Drosophila melanogaster" [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0001129 "TBP-class protein binding RNA
polymerase II transcription factor activity involved in
preinitiation complex assembly" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISS;IPI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0001075 "RNA polymerase
II core promoter sequence-specific DNA binding transcription factor
activity involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046427 "positive regulation of JAK-STAT cascade"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR014782 Pfam:PF01433 EMBL:AE014296 GO:GO:0022008
GO:GO:0043565 GO:GO:0008270 eggNOG:COG0308 GO:GO:0004222
GO:GO:0046427 GO:GO:0005669 GO:GO:0060261 GO:GO:0001129 CTD:6873
GeneTree:ENSGT00390000000420 KO:K03128 OMA:PCVDSFA EMBL:X79243
EMBL:AY070564 PIR:A54063 RefSeq:NP_729571.1 UniGene:Dm.6380
ProteinModelPortal:Q24325 DIP:DIP-255N IntAct:Q24325 STRING:Q24325
PaxDb:Q24325 EnsemblMetazoa:FBtr0076361 EnsemblMetazoa:FBtr0332688
GeneID:39164 KEGG:dme:Dmel_CG6711 FlyBase:FBgn0011836
InParanoid:Q24325 OrthoDB:EOG4PC86W PhylomeDB:Q24325
GenomeRNAi:39164 NextBio:812285 Bgee:Q24325 GermOnline:CG6711
Uniprot:Q24325
Length = 1221
Score = 313 (115.2 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 56/118 (47%), Positives = 84/118 (71%)
Query: 12 VVPEGDGTLVDRNAHLFTCPHENSGVHFVVPEG--DGTLVDRNAHLFTCPHENSARLWFP 69
++ EG G + F+ + GVHFV+P D ++H+FT +ENS+RLWFP
Sbjct: 127 MIQEGQGLRIRIE---FSLENPKCGVHFVIPPASTDEETQMNSSHMFTNCYENSSRLWFP 183
Query: 70 CIDTYSEVCTWRLEFTVDENLTAVSCGDLIEVVYTPDMRRKTFFYSLNIPAPAPSLEI 127
C+D++++ CTWRLEFTVD+N+TAVSCG+L+EV+ TPD+R+KTF YS++ P AP++ +
Sbjct: 184 CVDSFADPCTWRLEFTVDKNMTAVSCGELLEVIMTPDLRKKTFHYSVSTPVCAPNIAL 241
>DICTYBASE|DDB_G0292724 [details] [associations]
symbol:taf2 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
InterPro:IPR014782 Pfam:PF01433 dictyBase:DDB_G0292724
GenomeReviews:CM000155_GR EMBL:AAFI02000194 GO:GO:0008270
eggNOG:COG0308 GO:GO:0004222 GO:GO:0006366 GO:GO:0003743
GO:GO:0005669 KO:K03128 RefSeq:XP_002649090.1
EnsemblProtists:DDB0304679 GeneID:8628785 KEGG:ddi:DDB_G0292724
OMA:DRDKEHR Uniprot:C7G081
Length = 2044
Score = 181 (68.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 35 SGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEFTVDENLTAVS 94
S + F++P+ + + R H+FT + AR+WFP +D +E CTW L+ T + NL V+
Sbjct: 191 SSLQFILPDSEEYPL-RKPHMFTYSQPDGARMWFPSVDQINEKCTWELDLTANSNLVVVA 249
Query: 95 CGDLIEVVYTPDMRRKTFFYSLNIPAPAPSL 125
G L+E V D + TF Y +IP A ++
Sbjct: 250 TGQLLEKVCNEDETKNTFIYRQDIPTSANAI 280
>TAIR|locus:2031571 [details] [associations]
symbol:TAF2 "TBP-associated factor 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR014782 Pfam:PF01433 EMBL:CP002684 GO:GO:0009506
GO:GO:0008270 GO:GO:0004222 KO:K03128 OMA:YNDNSGN EMBL:AY102124
IPI:IPI00546623 RefSeq:NP_177536.2 UniGene:At.21897
ProteinModelPortal:Q8LPF0 IntAct:Q8LPF0 STRING:Q8LPF0 PRIDE:Q8LPF0
EnsemblPlants:AT1G73960.1 GeneID:843733 KEGG:ath:AT1G73960
TAIR:At1g73960 HOGENOM:HOG000084774 InParanoid:Q8LPF0
PhylomeDB:Q8LPF0 ProtClustDB:CLSN2690496 Genevestigator:Q8LPF0
Uniprot:Q8LPF0
Length = 1390
Score = 143 (55.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 37/89 (41%), Positives = 48/89 (53%)
Query: 35 SGVHFVVPEGDGTLVDRNAHLFTCPHENSARLWFPCIDTYSEVCTWRLEFTVDENLTAVS 94
SG+HF DG +V + + AR WFPCID C++ LEFTV N AVS
Sbjct: 170 SGIHF-----DGNIVHTDNQM------RRARCWFPCIDDEYHRCSFDLEFTVPHNFVAVS 218
Query: 95 CGDLI-EVVYTPDMRRKTFFYSLNIP-AP 121
G L+ +V+ D +KT+ Y L IP AP
Sbjct: 219 VGKLLYQVMCKEDTTQKTYVYELAIPIAP 247
>POMBASE|SPAC3A12.05c [details] [associations]
symbol:taf2 "TATA-binding protein associated factor
Taf2 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000785 "chromatin" evidence=NAS] [GO:0000991 "core RNA
polymerase II binding transcription factor activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=ISO] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0032153 "cell division site"
evidence=IDA] InterPro:IPR014782 Pfam:PF01433 PomBase:SPAC3A12.05c
GO:GO:0005829 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0032153 GO:GO:0008270 GO:GO:0000785 GO:GO:0008237
eggNOG:COG0308 GO:GO:0006367 GO:GO:0000991 GO:GO:0005669 KO:K03128
PIR:T38673 RefSeq:NP_593331.2 ProteinModelPortal:P87121
STRING:P87121 EnsemblFungi:SPAC3A12.05c.1 GeneID:2543107
KEGG:spo:SPAC3A12.05c HOGENOM:HOG000157894 OMA:YNDNSGN
OrthoDB:EOG43JGCZ NextBio:20804134 Uniprot:P87121
Length = 1172
Score = 82 (33.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 87 DENLTAVSCGDLIEVVYTP-DMRRKTFFYSLNIPAPAPS 124
D ++ + CGDL++ V P DMR+KT ++S+ P AP+
Sbjct: 233 DHDIEVICCGDLLDQVTHPKDMRKKTVYFSVTTPV-APN 270
Score = 71 (30.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 36 GVHFVVPEGDGTLVDRNAHLFT----CPHENSARLWFPCIDTYSEVCTWRLEFTVDENLT 91
G+ FV G + R H+FT P+ + W PC+D E TW E T+ + L+
Sbjct: 132 GITFV---GIDPVDHRYPHVFTNNSIIPYSTCS--WLPCVDGIWERSTWEFEITLPKTLS 186
Query: 92 AV 93
++
Sbjct: 187 SL 188
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.467 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 129 129 0.00091 102 3 11 22 0.36 31
29 0.41 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 569 (61 KB)
Total size of DFA: 142 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 12.10u 0.07s 12.17t Elapsed: 00:00:11
Total cpu time: 12.10u 0.07s 12.17t Elapsed: 00:00:15
Start: Thu Aug 15 12:49:36 2013 End: Thu Aug 15 12:49:51 2013