BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy13182
         (194 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3I7F|A Chain A, Aspartyl Trna Synthetase From Entamoeba Histolytica
 pdb|3I7F|B Chain B, Aspartyl Trna Synthetase From Entamoeba Histolytica
          Length = 548

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 46/84 (54%)

Query: 66  FVPIRQLNKDYVDKTVWVRGRLHTSRAKGKQCFVVIREQNFTIQGILSVGDTVSKQMIKY 125
           +  I +L     +KTV +R R+   R KG   F+ +R+  +T Q ++   +T+SK+ +++
Sbjct: 50  YTEIEELVPAMAEKTVTIRARVQAVRGKGNMVFLFLRKGIYTCQALVMKSETISKEFVQF 109

Query: 126 VSQIPKESILDIQAHVQATPTIVE 149
             +I  ESI DI   V+A    +E
Sbjct: 110 CQKISAESICDITGIVKAVEKPIE 133


>pdb|1ASY|A Chain A, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal
           Structure Of Yeast Aspartyl-Trna Synthetase Complexed
           With Trna Asp
 pdb|1ASY|B Chain B, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal
           Structure Of Yeast Aspartyl-Trna Synthetase Complexed
           With Trna Asp
 pdb|1ASZ|A Chain A, The Active Site Of Yeast Aspartyl-Trna Synthetase:
           Structural And Functional Aspects Of The Aminoacylation
           Reaction
 pdb|1ASZ|B Chain B, The Active Site Of Yeast Aspartyl-Trna Synthetase:
           Structural And Functional Aspects Of The Aminoacylation
           Reaction
          Length = 490

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 12/109 (11%)

Query: 43  EDVSARLYGKTPLIMSEKDVDR------DFVPIRQLNKDYVDKTVWVRGRLHTSRAKGKQ 96
           ED +   YGK PLI S +D DR       FV + +  KD  DK V  R R+H +R +G  
Sbjct: 1   EDTAKDNYGKLPLIQS-RDSDRTGQKRVKFVDLDEA-KD-SDKEVLFRARVHNTRQQGAT 57

Query: 97  -CFVVIREQNFTIQGILSVG--DTVSKQMIKYVSQIPKESILDIQAHVQ 142
             F+ +R+Q   IQG++      T+SK M+K+   +  ESI+ ++  V+
Sbjct: 58  LAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGIVK 106


>pdb|1EOV|A Chain A, Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.12) From
           Yeast
          Length = 487

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 12/102 (11%)

Query: 50  YGKTPLIMSEKDVDR------DFVPIRQLNKDYVDKTVWVRGRLHTSRAKGKQ-CFVVIR 102
           YGK PLI S +D DR       FV + +  KD  DK V  R R+H +R +G    F+ +R
Sbjct: 5   YGKLPLIQS-RDSDRTGQKRVKFVDLDEA-KD-SDKEVLFRARVHNTRQQGATLAFLTLR 61

Query: 103 EQNFTIQGILSVG--DTVSKQMIKYVSQIPKESILDIQAHVQ 142
           +Q   IQG++      T+SK M+K+   +  ESI+ ++  V+
Sbjct: 62  QQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGIVK 103


>pdb|3EU3|A Chain A, Crystal Structure Of Bdbd From Bacillus Subtilis (Reduced)
 pdb|3EU4|A Chain A, Crystal Structure Of Bdbd From Bacillus Subtilis
           (Oxidised)
 pdb|3GH9|A Chain A, Crystal Structure Of Edta-Treated Bdbd (Oxidised)
 pdb|3GHA|A Chain A, Crystal Structure Of Etda-Treated Bdbd (Reduced)
          Length = 202

 Score = 28.9 bits (63), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 144 TPTIVESLPMSILSVG-DTVSKQMIK--YVSQIPKESILDIQAHVQATPTI 191
           TP ++  L  S   +  +T+ + + K  + SQ+ K+S L+ + ++QATPTI
Sbjct: 117 TPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTI 167



 Score = 27.7 bits (60), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 9/45 (20%)

Query: 125 YVSQIPKESILDIQAHVQATPTIVESLPMSILSVGDTVSKQMIKY 169
           + SQ+ K+S L+ + ++QATPTI          V D V K    Y
Sbjct: 145 FASQVEKDSDLNQKMNIQATPTIY---------VNDKVIKNFADY 180


>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1
           In A Complex With Amp And Phenylalanine
 pdb|1AMU|B Chain B, Phenylalanine Activating Domain Of Gramicidin Synthetase 1
           In A Complex With Amp And Phenylalanine
          Length = 563

 Score = 28.9 bits (63), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 47  ARLYGKTPLIMSEKDVDRDFVPIRQLNKDYVDKTVWV 83
           AR Y K P + S+K VD  FVP  +L K   D+  W+
Sbjct: 383 ARGYWKRPELTSQKFVDNPFVPGEKLYKT-GDQARWL 418


>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
           Dinitrosoglutathione
          Length = 478

 Score = 27.7 bits (60), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 19/111 (17%)

Query: 77  VDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGDTVSKQMIKYV 126
           VD  +W  GR+  ++             K   +V   QN  ++GI +VGD   K ++  V
Sbjct: 282 VDXLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPV 341

Query: 127 SQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIKY 169
           +      +         D +      PT+V S P  I +VG T  + + KY
Sbjct: 342 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHKY 391


>pdb|3OWA|A Chain A, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
 pdb|3OWA|B Chain B, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
 pdb|3OWA|C Chain C, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
 pdb|3OWA|D Chain D, Crystal Structure Of Acyl-Coa Dehydrogenase Complexed With
           Fad From Bacillus Anthracis
          Length = 597

 Score = 27.3 bits (59), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)

Query: 124 KYVSQIPKE-----SILDIQAHVQATPTIVESLPMSILSVGDTVSKQMIKYVSQIPKESI 178
           KY   + KE     +I DI +++ A  + V     +I + G   +KQ + Y     +E+ 
Sbjct: 481 KYGKALDKEQEILVNIADIVSNLYAXESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAF 540

Query: 179 LDIQAHVQATPTIVES 194
            +I+AH + T   VE+
Sbjct: 541 NEIEAHAKETLIAVEN 556


>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
          Length = 463

 Score = 27.3 bits (59), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 67  VPIRQLNKDYVDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGD 116
           +P+  +  D VD  +W  GR+  ++             K   +V   QN  ++GI +VGD
Sbjct: 258 LPVMTMIPD-VDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 316

Query: 117 TVSKQMIKYVSQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIK 168
              K ++  V+      +         D +      PT+V S P  I +VG T  + + K
Sbjct: 317 VCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHK 375

Query: 169 Y 169
           Y
Sbjct: 376 Y 376


>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
           Inhibitor
          Length = 461

 Score = 27.3 bits (59), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 67  VPIRQLNKDYVDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGD 116
           +P+  +  D VD  +W  GR+  ++             K   +V   QN  ++GI +VGD
Sbjct: 256 LPVMTMIPD-VDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 314

Query: 117 TVSKQMIKYVSQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIK 168
              K ++  V+      +         D +      PT+V S P  I +VG T  + + K
Sbjct: 315 VCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHK 373

Query: 169 Y 169
           Y
Sbjct: 374 Y 374


>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
           As Derived From Refined Enzyme: Substrate Crystal
           Structures At 2 Angstroms Resolution
          Length = 478

 Score = 27.3 bits (59), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 19/111 (17%)

Query: 77  VDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGDTVSKQMIKYV 126
           VD  +W  GR+  ++             K   +V   QN  ++GI +VGD   K ++  V
Sbjct: 282 VDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPV 341

Query: 127 SQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIKY 169
           +      +         D +      PT+V S P  I +VG T  + + KY
Sbjct: 342 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHKY 391


>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
           Diglutathione-Dinitroso-Iron
          Length = 478

 Score = 27.3 bits (59), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 19/111 (17%)

Query: 77  VDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGDTVSKQMIKYV 126
           VD  +W  GR+  ++             K   +V   QN  ++GI +VGD   K ++  V
Sbjct: 282 VDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGDVCGKALLTPV 341

Query: 127 SQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIKY 169
           +      +         D +      PT+V S P  I +VG T  + + KY
Sbjct: 342 AIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHKY 391


>pdb|2WZL|A Chain A, The Structure Of The N-Rna Binding Domain Of The Mokola
           Virus Phosphoprotein
          Length = 303

 Score = 27.3 bits (59), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 118 VSKQMIKYVSQIPKESILDIQAHVQATPTIVESLP--MSILSVGD 160
           V  +M +  + +   +I   QAH+Q  P  V+SLP  MS L + D
Sbjct: 16  VELEMAEETTDLINRTIESNQAHLQGEPLYVDSLPEDMSRLRIED 60


>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
           Glutathione Complex
 pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
           Trypanothione Complex
 pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
           Disulfide Between Trypanothione And The Enzyme
 pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
           Glutathionylspermidine Complex
          Length = 461

 Score = 27.3 bits (59), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 67  VPIRQLNKDYVDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGD 116
           +P+  +  D VD  +W  GR+  ++             K   +V   QN  ++GI +VGD
Sbjct: 256 LPVMTMIPD-VDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 314

Query: 117 TVSKQMIKYVSQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIK 168
              K ++  V+      +         D +      PT+V S P  I +VG T  + + K
Sbjct: 315 VCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHK 373

Query: 169 Y 169
           Y
Sbjct: 374 Y 374


>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
           Resolution
          Length = 477

 Score = 27.3 bits (59), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 67  VPIRQLNKDYVDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGD 116
           +P+  +  D VD  +W  GR+  ++             K   +V   QN  ++GI +VGD
Sbjct: 272 LPVMTMIPD-VDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 330

Query: 117 TVSKQMIKYVSQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIK 168
              K ++  V+      +         D +      PT+V S P  I +VG T  + + K
Sbjct: 331 VCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHK 389

Query: 169 Y 169
           Y
Sbjct: 390 Y 390


>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
           Ajoene Inhibitor And Subversive Substrate
 pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
           With A Fluoro-analogue Of The Menadione Derivative M5
 pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
           With A Fluoro-analogue Of The Menadione Derivative M5
 pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
           As Derived From Refined Enzyme: Substrate Crystal
           Structures At 2 Angstroms Resolution
 pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
           As Derived From Refined Enzyme: Substrate Crystal
           Structures At 2 Angstroms Resolution
 pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
           As Derived From Refined Enzyme: Substrate Crystal
           Structures At 2 Angstroms Resolution
 pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
           As Derived From Refined Enzyme: Substrate Crystal
           Structures At 2 Angstroms Resolution
 pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
           Angstroms Resolution
 pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
           To Glutathione Reductase
 pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
           Resolution
 pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
           Resolution
 pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
           Resolution
 pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
           Resolution
 pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
           Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
           And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
 pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
           Pyocyanin, An Agent With Antimalarial Activity
 pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
           Pyocyanin, An Agent With Antimalarial Activity
          Length = 478

 Score = 27.3 bits (59), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 67  VPIRQLNKDYVDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGD 116
           +P+  +  D VD  +W  GR+  ++             K   +V   QN  ++GI +VGD
Sbjct: 273 LPVMTMIPD-VDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331

Query: 117 TVSKQMIKYVSQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIK 168
              K ++  V+      +         D +      PT+V S P  I +VG T  + + K
Sbjct: 332 VCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHK 390

Query: 169 Y 169
           Y
Sbjct: 391 Y 391


>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
           Reductase, Complexed With Gopi
          Length = 479

 Score = 26.9 bits (58), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 67  VPIRQLNKDYVDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGD 116
           +P+  +  D VD  +W  GR+  ++             K   +V   QN  ++GI +VGD
Sbjct: 274 LPVMTMIPD-VDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 332

Query: 117 TVSKQMIKYVSQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIK 168
              K ++  V+      +         D +      PT+V S P  I +VG T  + + K
Sbjct: 333 VCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHK 391

Query: 169 Y 169
           Y
Sbjct: 392 Y 392


>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
          Length = 478

 Score = 26.9 bits (58), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 67  VPIRQLNKDYVDKTVWVRGRLHTSR----------AKGKQCFVVIREQNFTIQGILSVGD 116
           +P+  +  D VD  +W  GR+  ++             K   +V   QN  ++GI +VGD
Sbjct: 273 LPVMTMIPD-VDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNTNVKGIYAVGD 331

Query: 117 TVSKQMIKYVSQIPKESIL--------DIQAHVQATPTIVESLPMSILSVGDTVSKQMIK 168
              K ++  V+      +         D +      PT+V S P  I +VG T  + + K
Sbjct: 332 VCGKALLTPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHP-PIGTVGLTEDEAIHK 390

Query: 169 Y 169
           Y
Sbjct: 391 Y 391


>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
           Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
           Resolution
          Length = 458

 Score = 26.9 bits (58), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 85  GRLHTSRAKGKQCFVVIREQNFTIQGILSVGDTVSKQMIKYVSQIPKESIL-DIQAHVQA 143
           GR  +  +K     VV R  N  I G  +VG  VS+    +   +   + L D+   + A
Sbjct: 377 GRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHA 436

Query: 144 TPTIVESL 151
            PT+ E++
Sbjct: 437 HPTLGEAV 444


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.315    0.131    0.356 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,295,627
Number of Sequences: 62578
Number of extensions: 148912
Number of successful extensions: 398
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 387
Number of HSP's gapped (non-prelim): 29
length of query: 194
length of database: 14,973,337
effective HSP length: 94
effective length of query: 100
effective length of database: 9,091,005
effective search space: 909100500
effective search space used: 909100500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)