Query psy13184
Match_columns 285
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 46136
Date Fri Aug 16 22:16:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13184.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13184hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13846 DUF4196: Domain of un 21.1 45 0.00099 27.7 0.9 31 24-57 44-74 (112)
2 PF14754 IFR3_antag: Papain-li 18.1 51 0.0011 29.8 0.6 20 58-77 230-249 (249)
3 COG0191 Fba Fructose/tagatose 11.2 97 0.0021 28.6 0.4 30 43-72 96-133 (286)
4 PRK07709 fructose-bisphosphate 10.2 1.1E+02 0.0023 27.5 0.4 29 44-72 99-135 (285)
5 TIGR01858 tag_bisphos_ald clas 9.8 1.2E+02 0.0026 27.2 0.5 47 25-72 76-130 (282)
6 PRK12857 fructose-1,6-bisphosp 9.2 1.2E+02 0.0026 27.1 0.3 48 24-72 77-132 (284)
7 TIGR00167 cbbA ketose-bisphosp 8.8 1.4E+02 0.003 26.8 0.5 48 24-72 80-135 (288)
8 PF12067 Sox_C_TAD: Sox C-term 8.7 1E+02 0.0022 26.9 -0.3 12 44-55 177-188 (197)
9 PRK12737 gatY tagatose-bisphos 8.6 1.4E+02 0.003 26.7 0.5 48 24-72 77-132 (284)
10 PRK09195 gatY tagatose-bisphos 8.6 1.4E+02 0.0031 26.7 0.5 48 24-72 77-132 (284)
No 1
>PF13846 DUF4196: Domain of unknown function (DUF4196)
Probab=21.10 E-value=45 Score=27.72 Aligned_cols=31 Identities=35% Similarity=0.402 Sum_probs=21.2
Q ss_pred cceeccccccccCCccccccccccccccCCCccc
Q psy13184 24 SIVQTDELTELKTPTRRTRTSSISSVMSDGSESG 57 (285)
Q Consensus 24 sivqtdeltelktptrrtrtssissvmsdgsesg 57 (285)
-|+--|--.|--.+.+|.|.|| ||.|--+|.
T Consensus 44 qiieED~EEE~Ik~gkRkr~SS---vm~DSDdSd 74 (112)
T PF13846_consen 44 QIIEEDLEEEHIKRGKRKRLSS---VMYDSDDSD 74 (112)
T ss_pred ceeccccchhhhcccccceeee---eeecCCccc
Confidence 3444444456778999999766 998766653
No 2
>PF14754 IFR3_antag: Papain-like auto-proteinase
Probab=18.14 E-value=51 Score=29.85 Aligned_cols=20 Identities=50% Similarity=0.728 Sum_probs=17.7
Q ss_pred ceeeeeecccccccccCCCC
Q psy13184 58 RVTRRSCKLSGIKLEDISES 77 (285)
Q Consensus 58 rvtrrscklsgikledises 77 (285)
.+|-|||||...-+-||||.
T Consensus 230 hittrscklksyyvcdisea 249 (249)
T PF14754_consen 230 HITTRSCKLKSYYVCDISEA 249 (249)
T ss_pred EeecceecceeEEEeecccC
Confidence 47899999999999999983
No 3
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=11.17 E-value=97 Score=28.62 Aligned_cols=30 Identities=33% Similarity=0.480 Sum_probs=21.8
Q ss_pred cccccccccCCCccc-----ceeeee---ecccccccc
Q psy13184 43 TSSISSVMSDGSESG-----RVTRRS---CKLSGIKLE 72 (285)
Q Consensus 43 tssissvmsdgsesg-----rvtrrs---cklsgikle 72 (285)
..-.||||-|||..- ++||+- |+..|+.+|
T Consensus 96 ~~GFsSvMiDgS~~~~eENi~~tkevv~~ah~~gvsVE 133 (286)
T COG0191 96 RAGFSSVMIDGSHLPFEENIAITKEVVEFAHAYGVSVE 133 (286)
T ss_pred hcCCceEEecCCcCCHHHHHHHHHHHHHHHHHcCCcEE
Confidence 356899999999754 566654 666788776
No 4
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=10.17 E-value=1.1e+02 Score=27.51 Aligned_cols=29 Identities=24% Similarity=0.383 Sum_probs=20.0
Q ss_pred ccccccccCCCccc-----ceeee---eecccccccc
Q psy13184 44 SSISSVMSDGSESG-----RVTRR---SCKLSGIKLE 72 (285)
Q Consensus 44 ssissvmsdgsesg-----rvtrr---scklsgikle 72 (285)
..++|||-|||..- +.||+ -|+-.|+.+|
T Consensus 99 ~GftSVM~DgS~lp~eeNi~~Trevv~~Ah~~gv~VE 135 (285)
T PRK07709 99 AGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVE 135 (285)
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 36899999999643 44554 4566677766
No 5
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=9.79 E-value=1.2e+02 Score=27.19 Aligned_cols=47 Identities=21% Similarity=0.356 Sum_probs=27.2
Q ss_pred ceeccccccccCCccccccccccccccCCCccc-----ceeeee---ecccccccc
Q psy13184 25 IVQTDELTELKTPTRRTRTSSISSVMSDGSESG-----RVTRRS---CKLSGIKLE 72 (285)
Q Consensus 25 ivqtdeltelktptrrtrtssissvmsdgsesg-----rvtrrs---cklsgikle 72 (285)
.+..|--..+..- +|.--...+|||-|||..- +.||+- |.-.||.+|
T Consensus 76 alHLDHg~~~e~i-~~ai~~GFtSVM~DgS~lp~eeNi~~T~~vv~~Ah~~gv~VE 130 (282)
T TIGR01858 76 ALHLDHHESLDDI-RQKVHAGVRSAMIDGSHFPFAQNVKLVKEVVDFCHRQDCSVE 130 (282)
T ss_pred EEECCCCCCHHHH-HHHHHcCCCEEeecCCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 4555544433322 2333346899999999653 556654 444577665
No 6
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=9.23 E-value=1.2e+02 Score=27.10 Aligned_cols=48 Identities=25% Similarity=0.392 Sum_probs=27.6
Q ss_pred cceeccccccccCCccccccccccccccCCCccc-----ceeeee---ecccccccc
Q psy13184 24 SIVQTDELTELKTPTRRTRTSSISSVMSDGSESG-----RVTRRS---CKLSGIKLE 72 (285)
Q Consensus 24 sivqtdeltelktptrrtrtssissvmsdgsesg-----rvtrrs---cklsgikle 72 (285)
-.+..|--..+..-.+--+ ...+|||-|||..- +.||+- |+-.|+.+|
T Consensus 77 ValHLDH~~~~e~i~~ai~-~GftSVM~DgS~lp~eeNi~~T~~vv~~Ah~~gvsVE 132 (284)
T PRK12857 77 VALHLDHGTDFEQVMKCIR-NGFTSVMIDGSKLPLEENIALTKKVVEIAHAVGVSVE 132 (284)
T ss_pred EEEECCCCCCHHHHHHHHH-cCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 3456665543332222222 46899999999653 455543 445677665
No 7
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=8.80 E-value=1.4e+02 Score=26.75 Aligned_cols=48 Identities=23% Similarity=0.304 Sum_probs=28.0
Q ss_pred cceeccccccccCCccccccccccccccCCCccc-----ceeeee---ecccccccc
Q psy13184 24 SIVQTDELTELKTPTRRTRTSSISSVMSDGSESG-----RVTRRS---CKLSGIKLE 72 (285)
Q Consensus 24 sivqtdeltelktptrrtrtssissvmsdgsesg-----rvtrrs---cklsgikle 72 (285)
-.+..|--..+..- ++.--...+|||-|||..- +.||+- |+-.||.+|
T Consensus 80 V~lHLDHg~~~e~i-~~ai~~GftSVMiDgS~lp~eeNi~~T~~vv~~Ah~~gv~VE 135 (288)
T TIGR00167 80 VALHLDHGASEEDC-AQAVKAGFSSVMIDGSHEPFEENIELTKKVVERAHKMGVSVE 135 (288)
T ss_pred EEEECCCCCCHHHH-HHHHHcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 34556654433222 2333346899999999643 455543 555677776
No 8
>PF12067 Sox_C_TAD: Sox C-terminal transactivation domain; InterPro: IPR021934 The Sox family of high mobility group (HMG) box transcription factors that are homologous to the Y-chromosome encoded sex- determining factor SRY plays important roles in embryonic development. Sox18, together with Sox7 and -17, constitutes the subgroup F within this family. Bioinformatic analysis of the C-termini of subgroup F Sox family members from different species including humans, mice, rat, chicken and Xenopus revealed three conserved blocks including highly conserved residues. They were termed proline, charged, and serine according to the predominance of the respective amino acids. The charged block comprises a strong transactivating domain []. This entry covers the entire Sox C-terminal domain, and was previously annotated as DUF3547.
Probab=8.72 E-value=1e+02 Score=26.94 Aligned_cols=12 Identities=58% Similarity=0.656 Sum_probs=10.5
Q ss_pred ccccccccCCCc
Q psy13184 44 SSISSVMSDGSE 55 (285)
Q Consensus 44 ssissvmsdgse 55 (285)
++|+||+||.|-
T Consensus 177 ~~l~SvlSDAss 188 (197)
T PF12067_consen 177 SSLISVLSDASS 188 (197)
T ss_pred hhHHHHHhhccc
Confidence 799999999874
No 9
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=8.63 E-value=1.4e+02 Score=26.75 Aligned_cols=48 Identities=23% Similarity=0.368 Sum_probs=27.2
Q ss_pred cceeccccccccCCccccccccccccccCCCccc-----ceeeee---ecccccccc
Q psy13184 24 SIVQTDELTELKTPTRRTRTSSISSVMSDGSESG-----RVTRRS---CKLSGIKLE 72 (285)
Q Consensus 24 sivqtdeltelktptrrtrtssissvmsdgsesg-----rvtrrs---cklsgikle 72 (285)
-.+..|--..+..- .+.--..++|||-|||..- +.||+- |+-.|+.+|
T Consensus 77 ValHLDH~~~~e~i-~~ai~~GftSVMiDgS~lp~eeNi~~T~~vv~~Ah~~gvsVE 132 (284)
T PRK12737 77 LALHLDHHEDLDDI-KKKVRAGIRSVMIDGSHLSFEENIAIVKEVVEFCHRYDASVE 132 (284)
T ss_pred EEEECCCCCCHHHH-HHHHHcCCCeEEecCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 34555544332222 2222346899999999653 456654 444677766
No 10
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=8.59 E-value=1.4e+02 Score=26.74 Aligned_cols=48 Identities=21% Similarity=0.315 Sum_probs=27.5
Q ss_pred cceeccccccccCCccccccccccccccCCCccc-----ceeeee---ecccccccc
Q psy13184 24 SIVQTDELTELKTPTRRTRTSSISSVMSDGSESG-----RVTRRS---CKLSGIKLE 72 (285)
Q Consensus 24 sivqtdeltelktptrrtrtssissvmsdgsesg-----rvtrrs---cklsgikle 72 (285)
-.+..|--..+-.- ++---..++|||-|||..- +.||+- |.-.|+.+|
T Consensus 77 V~lHLDHg~~~e~i-~~Ai~~GftSVM~DgS~l~~eeNi~~T~~vv~~Ah~~gv~VE 132 (284)
T PRK09195 77 LALHLDHHEKFDDI-AQKVRSGVRSVMIDGSHLPFAQNISLVKEVVDFCHRFDVSVE 132 (284)
T ss_pred EEEECCCCCCHHHH-HHHHHcCCCEEEeCCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 34556654443222 2222346899999999653 455553 455677665
Done!