Query psy13186
Match_columns 170
No_of_seqs 175 out of 533
Neff 4.8
Searched_HMMs 29240
Date Fri Aug 16 22:20:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13186.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13186hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jfi_B DR1 protein, transcript 100.0 5E-50 1.7E-54 325.9 16.3 145 11-155 9-153 (179)
2 2byk_B Chrac-14; nucleosome sl 100.0 3.3E-29 1.1E-33 193.7 10.8 97 12-108 4-101 (128)
3 1n1j_A NF-YB; histone-like PAI 99.9 8E-28 2.7E-32 175.5 11.0 90 12-101 3-93 (93)
4 3b0c_W CENP-W, centromere prot 99.9 2.7E-23 9.1E-28 147.0 7.5 69 15-83 2-70 (76)
5 1f1e_A Histone fold protein; a 99.8 6E-21 2E-25 151.8 8.3 75 16-90 3-77 (154)
6 1b67_A Protein (histone HMFA); 99.8 1E-18 3.5E-23 120.2 8.6 66 17-83 2-67 (68)
7 3b0c_T CENP-T, centromere prot 99.7 1.8E-17 6.1E-22 125.2 8.7 89 13-102 3-93 (111)
8 1f1e_A Histone fold protein; a 99.6 5.1E-16 1.7E-20 123.4 8.9 70 12-82 77-146 (154)
9 2byk_A Chrac-16; nucleosome sl 99.6 3.7E-16 1.3E-20 122.3 3.4 96 13-109 15-115 (140)
10 4g92_C HAPE; transcription fac 99.6 4.7E-15 1.6E-19 112.9 7.1 75 14-89 38-113 (119)
11 2hue_C Histone H4; mini beta s 99.5 1.1E-14 3.8E-19 104.6 7.3 75 13-88 6-80 (84)
12 1id3_B Histone H4; nucleosome 99.5 2.2E-14 7.4E-19 106.8 8.4 75 13-88 24-98 (102)
13 1n1j_B NF-YC; histone-like PAI 99.5 3E-14 1E-18 104.7 7.7 78 12-90 14-92 (97)
14 1ku5_A HPHA, archaeal histon; 99.5 9.1E-14 3.1E-18 96.2 8.3 64 17-81 6-69 (70)
15 1tzy_D Histone H4-VI; histone- 99.5 1.4E-13 4.8E-18 102.2 8.3 76 12-88 24-99 (103)
16 2yfw_B Histone H4, H4; cell cy 99.5 1.4E-13 4.6E-18 102.3 7.7 75 13-88 25-99 (103)
17 1jfi_A Transcription regulator 99.2 2.9E-11 1E-15 89.0 6.5 79 13-92 7-86 (98)
18 2hue_B Histone H3; mini beta s 98.7 6.8E-08 2.3E-12 68.8 8.9 70 15-84 1-74 (77)
19 3vh5_A CENP-S; histone fold, c 98.7 2E-08 6.9E-13 78.7 6.0 74 22-101 24-99 (140)
20 4dra_A Centromere protein S; D 98.7 9E-08 3.1E-12 72.6 8.6 75 22-102 32-108 (113)
21 1taf_B TFIID TBP associated fa 98.6 1.4E-07 4.8E-12 66.0 8.6 65 16-81 5-69 (70)
22 3v9r_A MHF1, uncharacterized p 98.6 1.6E-07 5.5E-12 68.6 7.9 61 22-82 17-79 (90)
23 3nqj_A Histone H3-like centrom 98.6 2.7E-07 9.1E-12 66.4 8.5 69 16-84 2-76 (82)
24 3b0b_B CENP-S, centromere prot 98.5 3.2E-07 1.1E-11 68.9 8.7 74 22-101 24-99 (107)
25 2yfv_A Histone H3-like centrom 98.5 5.4E-07 1.8E-11 66.9 7.7 68 13-80 23-97 (100)
26 1tzy_C Histone H3; histone-fol 98.4 1.7E-06 5.7E-11 67.5 8.7 72 13-84 58-133 (136)
27 3r45_A Histone H3-like centrom 98.4 1E-06 3.5E-11 70.1 7.5 69 13-81 73-147 (156)
28 3nqu_A Histone H3-like centrom 98.3 1.3E-06 4.5E-11 68.4 7.6 73 13-85 57-135 (140)
29 2nqb_D Histone H2B; nucleosome 98.3 2.4E-06 8.3E-11 65.6 7.6 65 21-85 37-101 (123)
30 1tzy_B Histone H2B; histone-fo 98.2 3E-06 1E-10 65.3 7.6 65 21-85 40-104 (126)
31 2nqb_C Histone H2A; nucleosome 98.2 5.6E-06 1.9E-10 63.2 8.3 69 14-82 20-88 (123)
32 2f8n_G Core histone macro-H2A. 98.2 6.3E-06 2.2E-10 62.7 8.4 69 14-82 19-87 (120)
33 1tzy_A Histone H2A-IV; histone 98.2 6.9E-06 2.4E-10 63.3 8.4 69 14-82 22-90 (129)
34 1id3_C Histone H2A.1; nucleoso 98.1 7.1E-06 2.4E-10 63.3 7.6 70 13-82 21-90 (131)
35 1f66_C Histone H2A.Z; nucleoso 98.1 1.1E-05 3.6E-10 62.1 8.1 69 14-82 24-93 (128)
36 2ly8_A Budding yeast chaperone 98.1 5.9E-06 2E-10 63.3 6.3 54 35-88 64-117 (121)
37 1taf_A TFIID TBP associated fa 98.1 1.9E-05 6.5E-10 54.8 8.2 60 22-82 6-65 (68)
38 2f8n_K Histone H2A type 1; nuc 98.1 1.4E-05 4.6E-10 63.1 8.0 69 14-82 41-109 (149)
39 2jss_A Chimera of histone H2B. 98.0 5E-05 1.7E-09 61.5 11.0 63 21-83 7-69 (192)
40 3b0b_C CENP-X, centromere prot 97.9 7.3E-05 2.5E-09 53.5 8.5 70 13-82 4-75 (81)
41 2jss_A Chimera of histone H2B. 97.8 4.2E-05 1.4E-09 62.0 7.5 69 14-82 102-171 (192)
42 4dra_E Centromere protein X; D 97.8 0.0001 3.5E-09 53.1 8.7 71 13-83 8-80 (84)
43 1h3o_B Transcription initiatio 97.8 0.00012 4E-09 51.9 8.7 66 17-82 5-70 (76)
44 1bh9_B TAFII28; histone fold, 97.6 0.00027 9.2E-09 51.2 8.4 68 17-85 16-84 (89)
45 2l5a_A Histone H3-like centrom 97.6 7.6E-05 2.6E-09 62.8 5.6 51 34-84 177-227 (235)
46 2l5a_A Histone H3-like centrom 96.5 0.0054 1.8E-07 51.5 6.7 71 14-84 8-85 (235)
47 3v9r_B MHF2, uncharacterized p 96.2 0.01 3.4E-07 43.1 5.8 48 18-65 2-51 (88)
48 3uk6_A RUVB-like 2; hexameric 90.9 0.61 2.1E-05 38.3 7.0 65 18-82 259-329 (368)
49 2ly8_A Budding yeast chaperone 89.1 0.9 3.1E-05 34.4 6.0 62 18-80 2-73 (121)
50 2c9o_A RUVB-like 1; hexameric 85.2 1.8 6.3E-05 37.6 6.7 65 18-82 366-436 (456)
51 2v1u_A Cell division control p 83.5 2.8 9.6E-05 33.9 6.6 65 20-84 203-277 (387)
52 1fnn_A CDC6P, cell division co 81.2 15 0.0005 29.8 10.2 77 18-94 193-285 (389)
53 2qby_A CDC6 homolog 1, cell di 79.4 6.2 0.00021 31.7 7.3 69 18-86 197-275 (386)
54 3ksy_A SOS-1, SON of sevenless 79.0 6.9 0.00024 38.2 8.7 68 14-82 101-168 (1049)
55 1khy_A CLPB protein; alpha hel 74.1 8.6 0.0003 27.6 6.2 38 35-84 5-42 (148)
56 3fh2_A Probable ATP-dependent 73.6 4.5 0.00015 29.6 4.6 37 35-83 6-42 (146)
57 2y1q_A CLPC N-domain, negative 73.4 4 0.00014 29.6 4.2 38 35-84 5-42 (150)
58 2chg_A Replication factor C sm 72.4 8.3 0.00028 28.0 5.8 63 17-81 160-224 (226)
59 3kw6_A 26S protease regulatory 72.1 4 0.00014 27.0 3.6 59 25-83 10-73 (78)
60 1g8p_A Magnesium-chelatase 38 71.7 12 0.0004 30.1 7.0 53 31-83 263-322 (350)
61 2qby_B CDC6 homolog 3, cell di 70.7 11 0.00037 30.7 6.6 65 18-84 197-271 (384)
62 3fes_A ATP-dependent CLP endop 70.6 5.1 0.00017 29.4 4.2 38 35-84 7-44 (145)
63 1njg_A DNA polymerase III subu 67.8 9.4 0.00032 27.9 5.2 62 18-80 185-248 (250)
64 3k1j_A LON protease, ATP-depen 66.5 41 0.0014 30.2 10.1 49 34-82 313-374 (604)
65 1k6k_A ATP-dependent CLP prote 66.4 4.8 0.00017 28.9 3.3 34 36-81 2-35 (143)
66 3aji_B S6C, proteasome (prosom 62.7 8.5 0.00029 25.5 3.8 33 52-84 40-72 (83)
67 2r44_A Uncharacterized protein 60.3 46 0.0016 26.7 8.5 51 33-83 224-297 (331)
68 2dzn_B 26S protease regulatory 60.2 10 0.00035 25.3 3.9 30 57-86 42-71 (82)
69 1in4_A RUVB, holliday junction 59.6 20 0.00067 29.5 6.2 67 21-87 183-254 (334)
70 2f3n_A SH3 and multiple ankyri 59.0 6.9 0.00024 26.2 2.8 23 71-93 5-27 (76)
71 3bq7_A Diacylglycerol kinase d 54.8 8.8 0.0003 25.9 2.8 24 70-93 9-32 (81)
72 3vlf_B 26S protease regulatory 54.8 13 0.00043 25.3 3.6 35 52-86 40-74 (88)
73 2chq_A Replication factor C sm 54.1 45 0.0016 25.9 7.3 65 17-83 160-226 (319)
74 2krk_A 26S protease regulatory 52.5 15 0.0005 25.1 3.6 31 53-83 51-81 (86)
75 3iot_A Maltose-binding protein 51.8 16 0.00056 30.8 4.6 33 117-149 354-386 (449)
76 3fes_A ATP-dependent CLP endop 51.8 20 0.00069 26.1 4.5 40 33-84 79-118 (145)
77 1k6k_A ATP-dependent CLP prote 50.5 48 0.0016 23.5 6.4 38 34-83 78-115 (143)
78 5pal_A Parvalbumin; calcium-bi 49.9 51 0.0018 21.5 7.2 71 18-98 6-88 (109)
79 3zri_A CLPB protein, CLPV; cha 49.8 13 0.00045 28.6 3.4 38 35-84 24-61 (171)
80 1hqc_A RUVB; extended AAA-ATPa 48.3 30 0.001 27.4 5.4 69 18-86 168-241 (324)
81 1jr3_A DNA polymerase III subu 48.3 23 0.00079 28.6 4.8 67 17-84 177-245 (373)
82 3fh2_A Probable ATP-dependent 48.3 27 0.00094 25.3 4.8 39 34-84 80-118 (146)
83 1uxc_A FRUR (1-57), fructose r 47.8 27 0.00091 22.7 4.2 36 16-51 10-45 (65)
84 3pfi_A Holliday junction ATP-d 47.0 24 0.00081 28.4 4.7 68 19-86 185-257 (338)
85 1ixs_A Holliday junction DNA h 46.6 30 0.001 22.6 4.3 39 74-126 18-56 (62)
86 3bos_A Putative DNA replicatio 46.5 17 0.00057 27.0 3.4 59 21-81 177-241 (242)
87 1wlz_A DJBP, CAP-binding prote 46.2 59 0.002 21.2 6.1 38 58-95 28-65 (105)
88 1lv7_A FTSH; alpha/beta domain 45.7 30 0.001 26.7 5.0 65 21-85 185-254 (257)
89 1w5s_A Origin recognition comp 44.9 99 0.0034 25.0 8.2 67 18-84 215-294 (412)
90 3fwb_A Cell division control p 44.6 72 0.0025 21.7 9.7 38 59-96 101-138 (161)
91 1bh9_A TAFII18; histone fold, 44.4 54 0.0019 20.3 5.5 39 23-61 6-44 (45)
92 1jr3_D DNA polymerase III, del 44.1 24 0.00083 28.7 4.3 67 17-83 141-209 (343)
93 2gle_A Neurabin-1; SAM domain, 43.5 7 0.00024 25.7 0.8 22 71-92 7-28 (74)
94 1iqp_A RFCS; clamp loader, ext 43.2 51 0.0017 25.8 6.0 64 18-83 169-234 (327)
95 2d8c_A Phosphatidylcholine:cer 43.0 9.2 0.00032 27.3 1.4 23 70-92 19-41 (97)
96 1kw4_A Polyhomeotic; SAM domai 42.8 17 0.00057 25.3 2.7 25 70-94 16-41 (89)
97 2y1q_A CLPC N-domain, negative 40.9 38 0.0013 24.2 4.5 38 34-83 78-115 (150)
98 3h4m_A Proteasome-activating n 40.5 27 0.00093 27.2 4.0 33 51-83 226-258 (285)
99 3vfd_A Spastin; ATPase, microt 37.4 1.8E+02 0.006 24.1 8.9 68 19-86 283-368 (389)
100 1sxj_D Activator 1 41 kDa subu 36.0 22 0.00077 28.4 2.8 67 17-84 191-264 (353)
101 3pxg_A Negative regulator of g 35.8 60 0.002 28.2 5.7 39 35-85 5-43 (468)
102 1ofh_A ATP-dependent HSL prote 35.7 83 0.0029 24.3 6.1 52 34-85 233-301 (310)
103 1yfs_A Alanyl-tRNA synthetase; 35.3 2E+02 0.0068 26.1 9.1 72 21-92 322-401 (465)
104 3zri_A CLPB protein, CLPV; cha 35.1 49 0.0017 25.3 4.6 38 34-83 97-135 (171)
105 2ns0_A Hypothetical protein; r 35.0 71 0.0024 22.6 5.0 37 61-97 14-51 (85)
106 1sxj_C Activator 1 40 kDa subu 35.0 81 0.0028 25.5 6.1 66 17-82 168-238 (340)
107 3h4s_E KCBP interacting Ca2+-b 34.7 75 0.0026 22.1 5.2 58 58-126 44-102 (135)
108 2ovk_B RLC, myosin regulatory 34.6 1.1E+02 0.0037 20.9 6.5 38 59-96 90-127 (153)
109 1ixz_A ATP-dependent metallopr 34.4 33 0.0011 26.5 3.5 59 23-81 191-254 (254)
110 1tiz_A Calmodulin-related prot 34.3 70 0.0024 18.6 4.9 37 60-96 7-43 (67)
111 1pva_A Parvalbumin; calcium bi 33.6 98 0.0033 20.1 6.0 71 17-97 6-88 (110)
112 1bu3_A Calcium-binding protein 33.4 99 0.0034 20.1 7.8 71 17-97 6-88 (109)
113 2lmt_A Calmodulin-related prot 32.1 1.3E+02 0.0043 20.9 6.5 42 57-98 86-127 (148)
114 3mse_B Calcium-dependent prote 31.6 1.4E+02 0.0048 21.3 9.2 36 59-96 44-79 (180)
115 4ds7_A Calmodulin, CAM; protei 31.6 1.1E+02 0.0039 20.2 10.7 41 59-99 89-129 (147)
116 3b9p_A CG5977-PA, isoform A; A 31.1 95 0.0032 24.2 5.8 60 34-93 207-282 (297)
117 1sxj_B Activator 1 37 kDa subu 30.9 60 0.0021 25.3 4.5 66 17-84 165-232 (323)
118 4b4t_K 26S protease regulatory 30.2 51 0.0018 29.0 4.4 31 52-82 383-413 (428)
119 4b4t_L 26S protease subunit RP 30.0 45 0.0015 29.5 4.0 31 52-82 391-421 (437)
120 1iy2_A ATP-dependent metallopr 29.1 72 0.0025 25.0 4.7 66 16-81 207-278 (278)
121 2ovk_C Myosin catalytic light 28.9 1.4E+02 0.0048 20.4 5.9 40 58-97 89-128 (159)
122 2e8o_A SAM domain and HD domai 28.7 27 0.00092 24.6 1.9 23 70-92 29-53 (103)
123 1wwi_A Hypothetical protein TT 28.4 1.4E+02 0.005 23.0 6.2 58 18-76 3-60 (148)
124 2ktg_A Calmodulin, putative; e 28.2 96 0.0033 19.1 4.4 39 59-97 19-57 (85)
125 3dtp_E RLC, myosin regulatory 28.0 1.7E+02 0.006 21.2 7.2 47 49-96 109-167 (196)
126 1rwy_A Parvalbumin alpha; EF-h 27.4 1.3E+02 0.0043 19.4 5.4 69 18-96 6-86 (109)
127 4a4j_A Pacszia, cation-transpo 27.3 28 0.00096 21.0 1.6 18 69-86 48-65 (69)
128 4b4t_I 26S protease regulatory 26.9 54 0.0019 29.3 4.0 68 15-82 349-422 (437)
129 3bs7_A Protein aveugle; sterIl 26.9 30 0.001 22.7 1.8 23 71-93 6-30 (78)
130 2joj_A Centrin protein; N-term 26.7 87 0.003 18.8 4.0 36 60-95 13-48 (77)
131 3j04_B Myosin regulatory light 26.7 1.1E+02 0.0037 20.5 4.8 82 14-97 20-119 (143)
132 4b4t_M 26S protease regulatory 26.5 48 0.0016 29.3 3.5 32 52-83 391-422 (434)
133 2pvb_A Protein (parvalbumin); 26.4 1.3E+02 0.0046 19.3 8.1 70 18-97 6-87 (108)
134 3vlv_A ALGQ1; sugar binding pr 26.4 1.4E+02 0.0048 25.4 6.4 71 31-103 421-493 (502)
135 1avs_A Troponin C; muscle cont 26.1 1.3E+02 0.0043 18.9 5.0 38 59-96 25-62 (90)
136 2kz2_A Calmodulin, CAM; TR2C, 25.9 1.3E+02 0.0046 19.5 5.0 37 60-96 35-71 (94)
137 3i5g_C Myosin catalytic light 25.8 1.6E+02 0.0056 21.1 5.9 39 58-96 89-127 (159)
138 3pxi_A Negative regulator of g 25.5 1E+02 0.0036 28.2 5.7 38 35-84 5-42 (758)
139 3sjs_A URE3-BP sequence specif 25.5 2.1E+02 0.0073 21.4 8.7 71 17-97 83-160 (220)
140 3pvs_A Replication-associated 25.5 1.3E+02 0.0044 26.2 6.1 66 18-84 165-245 (447)
141 4b4t_J 26S protease regulatory 25.3 61 0.0021 28.5 3.9 31 52-82 358-388 (405)
142 1s6j_A CDPK, calcium-dependent 24.8 1.3E+02 0.0044 18.6 4.7 38 60-97 29-66 (87)
143 1qvr_A CLPB protein; coiled co 24.7 64 0.0022 30.2 4.2 37 35-83 5-41 (854)
144 1z4h_A TORI, TOR inhibition pr 24.7 35 0.0012 21.8 1.7 26 14-39 18-45 (66)
145 1alv_A Calpain, S-camld; calci 24.6 1.8E+02 0.0063 20.3 6.5 40 58-97 81-120 (173)
146 3iwl_A Copper transport protei 24.5 37 0.0013 20.8 1.8 17 70-86 45-61 (68)
147 2opo_A Polcalcin CHE A 3; calc 24.4 1.3E+02 0.0044 18.6 4.5 36 60-96 17-52 (86)
148 2i7a_A Calpain 13; calcium-dep 24.2 2.1E+02 0.0073 20.9 10.6 83 14-97 17-122 (174)
149 2kn2_A Calmodulin; S MAPK phos 24.0 1.4E+02 0.0047 18.7 5.0 36 61-96 16-51 (92)
150 4b4t_H 26S protease regulatory 24.0 54 0.0018 29.6 3.4 32 52-83 419-450 (467)
151 1pul_A Hypothetical protein C3 23.6 2.1E+02 0.0073 21.3 6.2 54 16-85 40-95 (125)
152 3fs7_A Parvalbumin, thymic; ca 23.4 1.6E+02 0.0053 19.0 9.1 71 17-97 6-88 (109)
153 1j7q_A CAVP, calcium vector pr 23.2 1E+02 0.0035 19.2 3.9 31 61-91 21-51 (86)
154 2qz4_A Paraplegin; AAA+, SPG7, 23.0 32 0.0011 26.2 1.5 32 52-83 218-249 (262)
155 1khy_A CLPB protein; alpha hel 22.9 74 0.0025 22.5 3.4 35 35-81 82-116 (148)
156 2lv7_A Calcium-binding protein 22.4 79 0.0027 21.5 3.4 38 59-96 41-78 (100)
157 1xdx_A Tctex1 light chain prot 22.3 1.3E+02 0.0044 21.3 4.6 19 14-32 9-27 (114)
158 2p2u_A HOST-nuclease inhibitor 21.9 35 0.0012 26.5 1.5 19 72-90 108-126 (171)
159 3dxs_X Copper-transporting ATP 21.8 35 0.0012 20.9 1.3 18 69-86 49-66 (74)
160 1v85_A Similar to ring finger 21.7 33 0.0011 23.6 1.2 24 69-92 18-43 (91)
161 1pk1_B Sex COMB on midleg CG94 21.4 43 0.0015 23.3 1.8 24 70-93 16-41 (89)
162 1r6b_X CLPA protein; AAA+, N-t 21.4 76 0.0026 29.0 3.9 25 57-81 11-35 (758)
163 2es4_D Lipase chaperone; prote 21.3 3.8E+02 0.013 22.8 9.4 88 70-159 202-292 (332)
164 1uhk_A Aequorin 2, aequorin; E 21.3 2E+02 0.0067 20.1 5.5 39 58-96 113-151 (191)
165 2znd_A Programmed cell death p 21.1 2.2E+02 0.0074 19.8 6.5 70 18-97 41-117 (172)
166 2pmy_A RAS and EF-hand domain- 21.1 1.5E+02 0.005 19.0 4.4 28 59-86 32-59 (91)
167 3bs5_B Connector enhancer of k 21.1 56 0.0019 21.5 2.2 24 71-94 7-32 (80)
168 3f8t_A Predicted ATPase involv 20.8 3.4E+02 0.011 24.8 8.0 66 17-82 393-482 (506)
169 3cuq_A Vacuolar-sorting protei 20.7 56 0.0019 26.9 2.6 35 49-83 70-127 (234)
170 2fi0_A Conserved domain protei 20.4 42 0.0014 22.6 1.5 20 67-86 57-76 (81)
171 1whz_A Hypothetical protein; a 20.3 47 0.0016 21.4 1.7 17 70-86 4-20 (70)
172 1wdc_B Scallop myosin; calcium 20.3 2E+02 0.0067 19.6 5.2 37 60-96 93-129 (156)
173 1u5t_A Appears to BE functiona 20.2 1E+02 0.0035 25.3 4.1 37 48-84 88-142 (233)
174 2o3f_A Putative HTH-type trans 20.2 1.1E+02 0.0036 21.6 3.7 34 59-95 42-75 (111)
175 2z4s_A Chromosomal replication 20.1 73 0.0025 27.4 3.4 63 20-84 265-333 (440)
176 1c7v_A CAVP, calcium vector pr 20.1 99 0.0034 18.9 3.2 36 61-96 15-51 (81)
177 4h9n_C Death domain-associated 20.0 3.4E+02 0.012 22.0 7.2 41 84-136 105-145 (212)
No 1
>1jfi_B DR1 protein, transcription regulator NC2 beta chain; histone, H2A/H2B, tata-DNA, transcription initiation, NC2, negative cofactor, structural genomics, PSI; 2.62A {Homo sapiens} SCOP: a.22.1.3
Probab=100.00 E-value=5e-50 Score=325.91 Aligned_cols=145 Identities=66% Similarity=1.063 Sum_probs=134.3
Q ss_pred CCcccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHH
Q psy13186 11 NDDDELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKS 90 (170)
Q Consensus 11 ~~~ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~ 90 (170)
++++|+.||+|+|.||||++||+++||+||+++|++||++||+|||++||++|.+.+||||+++||++||+.|||++|++
T Consensus 9 ~~~eD~~LP~A~V~RImK~alp~~rISkDA~~al~ec~~eFI~~LtseA~e~a~~~~RKTI~~eDVl~Al~~LgF~~fv~ 88 (179)
T 1jfi_B 9 GNDDDLTIPRAAINKMIKETLPNVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTISPEHVIQALESLGFGSYIS 88 (179)
T ss_dssp ---CCCCCCHHHHHHHHHHHSTTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHTTGGGHH
T ss_pred CchhhhhcCHHHHHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHhcChHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13186 91 EAEEVMKDCKIVAANRKKQSNRLENLGIPEEELLRQQQELFAKAREEQAAADLSQWQHIQEITSQ 155 (170)
Q Consensus 91 ~l~~~l~~~Ke~~k~r~~k~~k~~~~g~~eEel~~~Q~eLF~~Ar~~~~~~~~~~~~~~~~~~~~ 155 (170)
+|+.+|..||+..+.|+++++|++++|||+|||+++|++||++||++++.++|++|+++|+++.+
T Consensus 89 ~lk~~L~~yre~~~~kkr~~~K~~~sg~~~Eel~~~Qqelf~~Ar~~~~~~~~~~~~~~~~~~~~ 153 (179)
T 1jfi_B 89 EVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWLQMQQAAQQ 153 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------
T ss_pred HHHHHHHHHHHHHHhCccccchhhccCCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999985544
No 2
>2byk_B Chrac-14; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_B
Probab=99.96 E-value=3.3e-29 Score=193.67 Aligned_cols=97 Identities=28% Similarity=0.482 Sum_probs=86.3
Q ss_pred CcccccCcHHHHHHHHHhhCC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHH
Q psy13186 12 DDDELILPRASINKIIKEILP-NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKS 90 (170)
Q Consensus 12 ~~ddl~LP~AtV~riiKe~LP-~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~ 90 (170)
.++++.||+|+|.||||+++| +++||+||+.+|++||++||+|||++|+++|.+.+||||+++||++||+.+||.+|++
T Consensus 4 ~~~d~~LP~A~I~rImK~~~pd~~~iS~dA~~~l~ka~e~FI~~lt~~A~~~a~~~kRKTI~~~Dv~~Al~~l~f~~fl~ 83 (128)
T 2byk_B 4 RIEDLNLPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTITAKDILQTLTELDFESFVP 83 (128)
T ss_dssp -------CCSHHHHHHHHHSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHTTCTTTHH
T ss_pred ccccccCCHHHHHHHHHHhCcccceECHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHcCcHHHHH
Confidence 368999999999999999999 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh
Q psy13186 91 EAEEVMKDCKIVAANRKK 108 (170)
Q Consensus 91 ~l~~~l~~~Ke~~k~r~~ 108 (170)
+|+.+|..||+..+.|+.
T Consensus 84 ~lk~~l~~yr~~~~~kk~ 101 (128)
T 2byk_B 84 SLTQDLEVYRKVVKEKKE 101 (128)
T ss_dssp HHHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHHHHhhhh
Confidence 999999999998887654
No 3
>1n1j_A NF-YB; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=99.95 E-value=8e-28 Score=175.52 Aligned_cols=90 Identities=32% Similarity=0.657 Sum_probs=84.4
Q ss_pred CcccccCcHHHHHHHHHhhCC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHH
Q psy13186 12 DDDELILPRASINKIIKEILP-NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKS 90 (170)
Q Consensus 12 ~~ddl~LP~AtV~riiKe~LP-~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~ 90 (170)
..+|+.||+|+|.||||+.+| +.+||+||+.+|++||++||++|+++|++.|.+.+||||+++||..||+.|||.+|++
T Consensus 3 ~~~d~~LP~a~i~ri~K~~~~~~~~is~dA~~~l~~a~e~Fi~~l~~~A~~~a~~~kRkTI~~~Dv~~Al~~l~F~~~i~ 82 (93)
T 1n1j_A 3 REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVE 82 (93)
T ss_dssp ----CCCCHHHHHHHHHHTSCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHTTCGGGHH
T ss_pred CcccccCChhHHHHHHHHhCCccceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHcCcHhhHH
Confidence 468999999999999999999 6899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy13186 91 EAEEVMKDCKI 101 (170)
Q Consensus 91 ~l~~~l~~~Ke 101 (170)
+++.++.+||+
T Consensus 83 ~~~~~l~~~r~ 93 (93)
T 1n1j_A 83 PLKLYLQKFRE 93 (93)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhC
Confidence 99999999984
No 4
>3b0c_W CENP-W, centromere protein W; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_W* 3vh5_W 3vh6_W
Probab=99.89 E-value=2.7e-23 Score=146.96 Aligned_cols=69 Identities=30% Similarity=0.471 Sum_probs=65.3
Q ss_pred cccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 15 ELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 15 dl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
...||+|+|.||||+++|+++||+||+++|.+||++||++||++|+++|..++||||+++||..|++.+
T Consensus 2 ~~~LP~A~V~rI~K~~~p~~~is~~A~~~i~~~~~~Fi~~la~eA~~~a~~~~rKTI~~~dI~~A~~~l 70 (76)
T 3b0c_W 2 RRTVPRGTLRKIIKKHKPHLRLAANTDLLVHLSFLLFLHRLAEEARTNAFENKSKIIKPEHTIAAAKVI 70 (76)
T ss_dssp --CCCHHHHHHHHHHHCTTCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 357999999999999999999999999999999999999999999999999999999999999998864
No 5
>1f1e_A Histone fold protein; archaeal histone protein, DNA binding protein; HET: MSE; 1.37A {Methanopyrus kandleri} SCOP: a.22.1.2
Probab=99.83 E-value=6e-21 Score=151.83 Aligned_cols=75 Identities=19% Similarity=0.357 Sum_probs=72.2
Q ss_pred ccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHH
Q psy13186 16 LILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKS 90 (170)
Q Consensus 16 l~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~ 90 (170)
..||+|+|.||||+.||..+||+||++.|.+|+++|+.+|+++|++.|.+.|||||+++||++||..|||++|++
T Consensus 3 ~~LP~a~V~Riik~~lg~~rVS~dA~~~l~~~l~~f~~~i~~~A~~~a~ha~RKTv~a~DV~~a~~~lg~~~v~d 77 (154)
T 1f1e_A 3 VELPKAAIERIFRQGIGERRLSQDAKDTIYDFVPTMAEYVANAAKSVLDASGKKTLMEEHLKALADVLMVEGVED 77 (154)
T ss_dssp -CCCHHHHHHHHHTTSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHHHTCTTSTT
T ss_pred ccCCccHHHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHhcccccCCc
Confidence 369999999999999999999999999999999999999999999999999999999999999999999999864
No 6
>1b67_A Protein (histone HMFA); DNA binding protein; 1.48A {Methanothermus fervidus} SCOP: a.22.1.2 PDB: 1hta_A 1a7w_A 1b6w_A 1bfm_A
Probab=99.77 E-value=1e-18 Score=120.19 Aligned_cols=66 Identities=32% Similarity=0.358 Sum_probs=64.3
Q ss_pred cCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 17 ILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
.||+++|.||||+. ++.+||+||..+|++||++||.+|+++||..|.+.+||||+++||..|++.|
T Consensus 2 ~lP~a~v~Ri~k~~-~~~ris~~A~~~l~~a~e~fi~~l~~~A~~~a~~~kRkTI~~~Di~~A~~~l 67 (68)
T 1b67_A 2 ELPIAPIGRIIKNA-GAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKMF 67 (68)
T ss_dssp CSCHHHHHHHHHHT-TCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHGGGG
T ss_pred CCCccHHHHHHhcC-CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhc
Confidence 59999999999999 8899999999999999999999999999999999999999999999999887
No 7
>3b0c_T CENP-T, centromere protein T; histone fold, DNA binding, DNA binding protein; HET: CIT; 2.20A {Gallus gallus} PDB: 3b0d_T* 3vh5_T 3vh6_T
Probab=99.72 E-value=1.8e-17 Score=125.17 Aligned_cols=89 Identities=16% Similarity=0.214 Sum_probs=78.8
Q ss_pred cccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHH
Q psy13186 13 DDELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKSEA 92 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l 92 (170)
.+|+.||+++|.||++.. +..+||+++.+.|.+|+.+|+..|+..|+..|.+.|||||+++||+.||+..||..|+.++
T Consensus 3 ~~d~~lP~a~I~Ri~r~~-g~~rIS~~a~~~l~e~l~~f~~~v~~da~~~A~HA~RKTV~~eDV~lalrr~g~~~~~~~l 81 (111)
T 3b0c_T 3 TREPEIASSLIKQIFSHY-VKTPVTRDAYKIVEKCSERYFKQISSDLEAYSQHAGRKTVEMADVELLMRRQGLVTDKMPL 81 (111)
T ss_dssp -------CHHHHHHHHHH-HCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTTSSBTTBCH
T ss_pred CCCCCCCHHHHHHHHHHC-CCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHCCCccccccH
Confidence 578899999999999998 5889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH--HHH
Q psy13186 93 EEVMKDC--KIV 102 (170)
Q Consensus 93 ~~~l~~~--Ke~ 102 (170)
..+++.| ++.
T Consensus 82 ~~l~~~~lp~E~ 93 (111)
T 3b0c_T 82 HVLVERHLPLEY 93 (111)
T ss_dssp HHHHHHHSCHHH
T ss_pred HHHHHHhCcHHH
Confidence 9999998 553
No 8
>1f1e_A Histone fold protein; archaeal histone protein, DNA binding protein; HET: MSE; 1.37A {Methanopyrus kandleri} SCOP: a.22.1.2
Probab=99.64 E-value=5.1e-16 Score=123.41 Aligned_cols=70 Identities=21% Similarity=0.311 Sum_probs=67.2
Q ss_pred CcccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 12 DDDELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 12 ~~ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
+.+++.||+++|.||||+. +..+||.||++.+.+|+.+|+.+|+++|++.|.+.+||||+++||+.||+.
T Consensus 77 d~~~l~lP~a~V~Ri~k~~-g~~RVS~~A~~~l~~~le~f~~~I~~~A~~~a~ha~RKTIt~eDV~~Al~~ 146 (154)
T 1f1e_A 77 DYDGELFGRATVRRILKRA-GIERASSDAVDLYNKLICRATEELGEKAAEYADEDGRKTVQGEDVEKAITY 146 (154)
T ss_dssp TCCSCCCCHHHHHHHHHHT-TCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred ccccccCCccHHHHHHHHc-CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHh
Confidence 4688999999999999999 688999999999999999999999999999999999999999999999986
No 9
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=99.59 E-value=3.7e-16 Score=122.34 Aligned_cols=96 Identities=15% Similarity=0.184 Sum_probs=60.4
Q ss_pred cccccCcHHHHHHHHHhhCC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCCCccchhhHHHHHhhcCCCccHH
Q psy13186 13 DDELILPRASINKIIKEILP-NIRVANESRELVMNCCMEFIHLISSEANDIC-NEQQKKTINAEHVLQALDQLGFGDYKS 90 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP-~~~iSkdA~e~i~~c~~eFI~~lsseAnei~-~~~~RKTIs~edVl~AL~~LgF~~yi~ 90 (170)
...+.||.|.|.||||.. | ..+||++|..+|.+||..||.+|+..|+.+| ...+||||++.||..|+...++.+|+.
T Consensus 15 ~~~~~LPlaRIKrIMK~d-pdv~~Is~eA~vliakA~ElFI~~Lt~~A~~~a~~~~kRKtI~~~Dl~~AV~~~e~~dFL~ 93 (140)
T 2byk_A 15 TAETFLPLSRVRTIMKSS-MDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALKYEHLSQVVNKNKNLEFLL 93 (140)
T ss_dssp --------------CCSS-SSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCEECHHHHHHHHHTCSTTGGGT
T ss_pred ccCCCCCHHHHHHHHhcC-cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCHHHHHHHHhcCchhhhHh
Confidence 567899999999999988 7 4689999999999999999999999999999 999999999999999998665555555
Q ss_pred ---HHHHHHHHHHHHHHhhhhh
Q psy13186 91 ---EAEEVMKDCKIVAANRKKQ 109 (170)
Q Consensus 91 ---~l~~~l~~~Ke~~k~r~~k 109 (170)
+....+..|++..+.++..
T Consensus 94 divP~ki~l~~~~~~~~~~~~~ 115 (140)
T 2byk_A 94 QIVPQKIRVHQFQEMLRLNRSA 115 (140)
T ss_dssp TTSCSCC---------------
T ss_pred ccccchhhHHHHHHHHHhcccc
Confidence 7788999999877665444
No 10
>4g92_C HAPE; transcription factor, nucleosome, minor groove binding, CCAA complex, histone fold motif, specific binding to the ccaat- nucleus; HET: DNA; 1.80A {Aspergillus nidulans} PDB: 4g91_C*
Probab=99.56 E-value=4.7e-15 Score=112.85 Aligned_cols=75 Identities=23% Similarity=0.303 Sum_probs=68.1
Q ss_pred ccccCcHHHHHHHHHhhCC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccH
Q psy13186 14 DELILPRASINKIIKEILP-NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYK 89 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP-~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi 89 (170)
....||.|.|.||||.. | ..+||++|..+|.+||..||.+|+..|+..|...+||||+++||..|+...+.-+|+
T Consensus 38 k~~~lPvaRIkrImK~d-~~~~~is~eA~v~la~a~E~Fi~~L~~~A~~~a~~~krktI~~~di~~Av~~~e~~dFL 113 (119)
T 4g92_C 38 KIHQLPLARIKKVMKAD-PEVKMISAEAPILFAKGCDVFITELTMRAWIHAEDNKRRTLQRSDIAAALSKSDMFDFL 113 (119)
T ss_dssp SCCSSCHHHHHHHHHTS-TTCCEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTCGGGGGG
T ss_pred ccCCCCHHHHHHHHhhC-CccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccCHHHHHHHHhcCchhhHH
Confidence 35679999999999976 7 579999999999999999999999999999999999999999999999887655554
No 11
>2hue_C Histone H4; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis} SCOP: a.22.1.1 PDB: 3nqj_B 1aoi_B 3kwq_B* 1hio_D 2yfv_B
Probab=99.54 E-value=1.1e-14 Score=104.57 Aligned_cols=75 Identities=19% Similarity=0.195 Sum_probs=69.3
Q ss_pred cccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCcc
Q psy13186 13 DDELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDY 88 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~y 88 (170)
+....||+++|.||++... -.+||+|+.+.+.+|+.+|+..|+.+|...|++.+||||+++||..||+.+||+-|
T Consensus 6 ~~~~~ip~~~I~Riar~~G-v~rIs~da~~~l~~~l~~~~~~I~~dA~~~a~ha~RKTvt~~DV~~Alk~~g~~lY 80 (84)
T 2hue_C 6 DNIQGITKPAIRRLARRGG-VKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 80 (84)
T ss_dssp GGCCSSCHHHHHHHHHHTT-CCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTTCEEEE
T ss_pred ccCCCCCHHHHHHHHHHcC-chhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHcCCCCC
Confidence 4455799999999999885 36899999999999999999999999999999999999999999999999998765
No 12
>1id3_B Histone H4; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=99.53 E-value=2.2e-14 Score=106.80 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=69.7
Q ss_pred cccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCcc
Q psy13186 13 DDELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDY 88 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~y 88 (170)
+....||+++|.||++... -.+||.|+.+.|.+|+.+||..|+.+|...|++.+||||+++||..||+.+||+-|
T Consensus 24 ~~i~~ip~~~I~Rlar~~G-v~rIS~da~~~l~~~le~fi~~I~~dA~~~a~HakRKTVt~~DV~~ALkr~g~~lY 98 (102)
T 1id3_B 24 DNIQGITKPAIRRLARRGG-VKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRTLY 98 (102)
T ss_dssp CCGGGSCHHHHHHHHHHTT-CCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTTCCEE
T ss_pred hccCCCCHHHHHHHHHHcC-chhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHcCCCCC
Confidence 4456799999999999975 36899999999999999999999999999999999999999999999999999866
No 13
>1n1j_B NF-YC; histone-like PAIR, DNA binding protein; 1.67A {Homo sapiens} SCOP: a.22.1.3
Probab=99.51 E-value=3e-14 Score=104.66 Aligned_cols=78 Identities=21% Similarity=0.216 Sum_probs=68.4
Q ss_pred CcccccCcHHHHHHHHHhhCCC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHH
Q psy13186 12 DDDELILPRASINKIIKEILPN-IRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKS 90 (170)
Q Consensus 12 ~~ddl~LP~AtV~riiKe~LP~-~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~ 90 (170)
+...+.||.|.|.||||.. |+ .+||++|..+|.+|+..||.+|+..|...|...+||||+++||..|+...++.+|+.
T Consensus 14 ~~~~~~lP~arIkrImK~~-~~~~~is~eA~~~laka~E~Fi~~l~~~A~~~a~~~krktI~~~di~~Av~~~e~~~FL~ 92 (97)
T 1n1j_B 14 DFRVQELPLARIKKIMKLD-EDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLI 92 (97)
T ss_dssp ------CCHHHHHHHHTTS-TTCCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTCGGGGGGT
T ss_pred CcCCCcCCHHHHHHHHccC-ccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHhcCcHHHHHH
Confidence 3567899999999999998 75 689999999999999999999999999999999999999999999999998888764
No 14
>1ku5_A HPHA, archaeal histon; histone fold, DNA binding protein; 2.30A {Pyrococcus horikoshii} SCOP: a.22.1.2
Probab=99.49 E-value=9.1e-14 Score=96.18 Aligned_cols=64 Identities=20% Similarity=0.369 Sum_probs=61.3
Q ss_pred cCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 17 ILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
.||+++|.||+|+. +..+||+++...|.+|+..|+..|+..|+..|.+.|||||+++||..|++
T Consensus 6 ~lp~a~v~Rl~r~~-g~~ris~~a~~~l~e~~~~~~~~v~~dA~~~a~hakRkTI~~~DV~lA~~ 69 (70)
T 1ku5_A 6 ELPIAPVDRLIRKA-GAERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 69 (70)
T ss_dssp CSCHHHHHHHHHHT-TCSEECHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHT
T ss_pred cCChHHHHHHHHHc-CcceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHH
Confidence 69999999999987 46799999999999999999999999999999999999999999999986
No 15
>1tzy_D Histone H4-VI; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1f66_B 1eqz_D 1hq3_D 1u35_B 2aro_D 2cv5_B* 2f8n_B 3nqu_B 3r45_B 3azg_B 3a6n_B 3an2_B 3av1_B 3av2_B 3ayw_B 3aze_B 3azf_B 3afa_B 3azh_B 3azk_B ...
Probab=99.47 E-value=1.4e-13 Score=102.15 Aligned_cols=76 Identities=18% Similarity=0.193 Sum_probs=70.3
Q ss_pred CcccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCcc
Q psy13186 12 DDDELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDY 88 (170)
Q Consensus 12 ~~ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~y 88 (170)
.+..-.||+++|.||++...+ .+||.++.+.|..|+..|+..|+.+|...|++.+||||+++||..||+.+||+-|
T Consensus 24 r~~~~gip~~~I~Rlar~~G~-~rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktIt~~DV~~Alr~~g~~lY 99 (103)
T 1tzy_D 24 RDNIQGITKPAIRRLARRGGV-KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLY 99 (103)
T ss_dssp CCGGGGSCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTTCEEE
T ss_pred hhhcccCCHHHHHHHHHHcCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHcCCCCc
Confidence 345566999999999999864 5899999999999999999999999999999999999999999999999999755
No 16
>2yfw_B Histone H4, H4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.60A {Kluyveromyces lactis nrrl y-1140}
Probab=99.46 E-value=1.4e-13 Score=102.33 Aligned_cols=75 Identities=20% Similarity=0.229 Sum_probs=64.1
Q ss_pred cccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCcc
Q psy13186 13 DDELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDY 88 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~y 88 (170)
+..-.||+++|.||++...+ .+||.++.+.|..|+..|+..|+.+|...|++.+||||+++||..||+.+||+-|
T Consensus 25 ~~~~gip~~~I~Rlar~~G~-~rIs~~a~~~l~~vle~~~~~V~~dA~~~a~hakRktvt~~DV~~Alr~~g~~lY 99 (103)
T 2yfw_B 25 DNIQGITKPAIRRLARRGGV-KRISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVTSLDVVYALKRQGRTLY 99 (103)
T ss_dssp -----CCHHHHHHHHHHTTC-CEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHC----
T ss_pred hhhccCCHHHHHHHHHHcCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcHHHHHHHHHHcCCCCc
Confidence 44556999999999999864 5899999999999999999999999999999999999999999999999998755
No 17
>1jfi_A Transcription regulator NC2 alpha chain; histone, H2A/H2B, tata-DNA, transcription initiation, NC2, negative cofactor, structural genomics, PSI; 2.62A {Homo sapiens} SCOP: a.22.1.3
Probab=99.19 E-value=2.9e-11 Score=88.97 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=59.0
Q ss_pred cccccCcHHHHHHHHHhhCCC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHHH
Q psy13186 13 DDELILPRASINKIIKEILPN-IRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKSE 91 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP~-~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~ 91 (170)
.-.+.||.+.|.||||.. |+ .+||.+|..+|..+|..|+.+|+..|...|...+||||++.||..|+..-+.-+|+..
T Consensus 7 k~~~~fPvaRIkrimK~~-~~~~~vs~~A~v~la~a~E~Fi~el~~~A~~~a~~~krktI~~~di~~av~~~e~l~FL~d 85 (98)
T 1jfi_A 7 KYNARFPPARIKKIMQTD-EEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLKQCIELEGDPAANKA 85 (98)
T ss_dssp ---CCCCHHHHHHHHTTS-TTCCCBCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC---CBCHHHHHTTCC----------
T ss_pred ccCCCCChHHHHHHHHcC-ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecHHHHHHHHhcCchhhHHHh
Confidence 345789999999999974 64 6899999999999999999999999999999999999999999999998766666554
Q ss_pred H
Q psy13186 92 A 92 (170)
Q Consensus 92 l 92 (170)
+
T Consensus 86 i 86 (98)
T 1jfi_A 86 R 86 (98)
T ss_dssp -
T ss_pred c
Confidence 3
No 18
>2hue_B Histone H3; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis}
Probab=98.72 E-value=6.8e-08 Score=68.76 Aligned_cols=70 Identities=11% Similarity=0.219 Sum_probs=63.6
Q ss_pred cccCcHHHHHHHHHhhC----CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 15 ELILPRASINKIIKEIL----PNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 15 dl~LP~AtV~riiKe~L----P~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
++.||++.+.|+|+++. ++.+++.+|..+|++++..|+.-|...||..|.+.||+||.+.||--|..--|
T Consensus 1 ~lli~k~PF~RLVRei~~~~~~~~R~q~~Al~aLQea~Eaylv~lfeda~l~A~HAkRvTi~~kDiqLa~rirg 74 (77)
T 2hue_B 1 MALIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRG 74 (77)
T ss_dssp -CCSCHHHHHHHHHHHHHTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHTT
T ss_pred CCccccchHHHHHHHHHHHcCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcHhhHHHHHHHhC
Confidence 47899999999999994 36899999999999999999999999999999999999999999988876544
No 19
>3vh5_A CENP-S; histone fold, chromosome segregation, DNA binding, nucleus, binding protein; 2.40A {Gallus gallus} PDB: 3vh6_A
Probab=98.69 E-value=2e-08 Score=78.70 Aligned_cols=74 Identities=5% Similarity=0.088 Sum_probs=64.7
Q ss_pred HHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHHHHH
Q psy13186 22 SINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVMKDC 99 (170)
Q Consensus 22 tV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~~~ 99 (170)
+|.||+++... ++.||+++..+|.+.+..|+..|+..+...|.+.|||||+++||.-+++.- +.|..++..|
T Consensus 24 ~VgkIvee~~~~~~~~vS~~ai~aL~El~~~~~e~ia~DLe~FAkHAGRKTI~~eDVkLa~Rrn------~~L~~~L~~~ 97 (140)
T 3vh5_A 24 TTGALAQDVAEDKGVLFSKQTVAAISEITFRQAENFARDLEMFARHAKRSTITSEDVKLLARRS------NSLLKYITQK 97 (140)
T ss_dssp HHHHHHHHHHHHHTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHTTS------HHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhC------HHHHHHHHHH
Confidence 68899999875 799999999999999999999999999999999999999999999999974 4444555545
Q ss_pred HH
Q psy13186 100 KI 101 (170)
Q Consensus 100 Ke 101 (170)
.+
T Consensus 98 ~~ 99 (140)
T 3vh5_A 98 SD 99 (140)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 20
>4dra_A Centromere protein S; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_A
Probab=98.67 E-value=9e-08 Score=72.63 Aligned_cols=75 Identities=9% Similarity=0.124 Sum_probs=66.4
Q ss_pred HHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHHHHH
Q psy13186 22 SINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVMKDC 99 (170)
Q Consensus 22 tV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~~~ 99 (170)
+|.||+++... ++.||+++..+|.+.+..|+.-|+..+...|...|||||+++||.-+++.- +.|..++..|
T Consensus 32 ~V~rIvke~gaer~~~vS~~ai~aL~El~~~~~~~ia~Dl~~fAkHAgRkTI~~eDV~La~Rr~------~~L~~~l~~~ 105 (113)
T 4dra_A 32 TVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKLLARRS------NSLLKYITDK 105 (113)
T ss_dssp HHHHHHHHHHHHHTCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTC------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHhC------HHHHHHHHHH
Confidence 78999999975 799999999999999999999999999999999999999999999999873 5566666655
Q ss_pred HHH
Q psy13186 100 KIV 102 (170)
Q Consensus 100 Ke~ 102 (170)
.+.
T Consensus 106 ~~e 108 (113)
T 4dra_A 106 SEE 108 (113)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 21
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=98.65 E-value=1.4e-07 Score=65.97 Aligned_cols=65 Identities=11% Similarity=0.134 Sum_probs=60.3
Q ss_pred ccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 16 LILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 16 l~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
-.||.++|.+|++... --++|.|+...|.+-++..+..|+.+|...+.+.+|||++++||-.||+
T Consensus 5 s~lp~~~v~~iaes~G-i~~lsddaa~~LA~dvEyr~~eI~qeA~kfmrHakRk~Lt~~DI~~Alk 69 (70)
T 1taf_B 5 SSISAESMKVIAESIG-VGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp CCCCHHHHHHHHHHTT-CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred ccCCHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecHHHHHHHHc
Confidence 3699999999999873 2389999999999999999999999999999999999999999999985
No 22
>3v9r_A MHF1, uncharacterized protein YOL086W-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=98.59 E-value=1.6e-07 Score=68.55 Aligned_cols=61 Identities=8% Similarity=0.208 Sum_probs=58.3
Q ss_pred HHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 22 SINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 22 tV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
+|.||+.+.++ ++.||+++..+|.+.+..|+.-|+..+...|.+.|||||+++||.-+++.
T Consensus 17 ~V~ki~~e~~~~~g~~vs~~~i~aL~e~~~~~~~~ia~Dl~~fA~HAgRkTI~~eDV~L~~Rr 79 (90)
T 3v9r_A 17 RVEERLQQVLSSEDIKYTPRFINSLLELAYLQLGEMGSDLQAFARHAGRGVVNKSDLMLYLRK 79 (90)
T ss_dssp HHHHHHHHHSCSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTT
T ss_pred HHHHHHHHHHHhcCceeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHh
Confidence 78999999998 59999999999999999999999999999999999999999999998876
No 23
>3nqj_A Histone H3-like centromeric protein A; alpha helix, histone fold, centromere, DNA binding protein; 2.10A {Homo sapiens}
Probab=98.58 E-value=2.7e-07 Score=66.42 Aligned_cols=69 Identities=13% Similarity=0.166 Sum_probs=62.8
Q ss_pred ccCcHHHHHHHHHhhC------CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 16 LILPRASINKIIKEIL------PNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 16 l~LP~AtV~riiKe~L------P~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
+.||++.+.|+|+++. .+.+++.+|..+|++++..|+.-|...||..|.+.+|+||.+.||--|..--|
T Consensus 2 lLI~klPF~RLVREI~~~~~~~~~~R~q~~Al~aLQea~E~ylv~Lfeda~lcAiHAkRvTi~~kDiqLa~rirg 76 (82)
T 3nqj_A 2 LLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRIRG 76 (82)
T ss_dssp CSSCHHHHHHHHHHHHHHHHSSCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHC
T ss_pred CCcccccHHHHHHHHHHHhccCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcHHHHHHHHHHcc
Confidence 5789999999999998 26899999999999999999999999999999999999999999987765433
No 24
>3b0b_B CENP-S, centromere protein S; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus}
Probab=98.55 E-value=3.2e-07 Score=68.87 Aligned_cols=74 Identities=5% Similarity=0.075 Sum_probs=64.2
Q ss_pred HHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHHHHH
Q psy13186 22 SINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVMKDC 99 (170)
Q Consensus 22 tV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~~~ 99 (170)
+|.||+++... ++++|+++...|.+.+..|+.-|+..|...|.+.|||||+++||.-|++.. |.|...+..|
T Consensus 24 ~V~rI~~~~g~~~~~~vs~~~i~aL~E~~~~~~~~ia~Da~~fA~HAgRkTI~~eDV~La~Rrn------~~l~~~l~~~ 97 (107)
T 3b0b_B 24 TTGCLCQDVAEDKGVLFSKQTVAAISEITFRQCENFARDLEMFARHAKRSTITSEDVKLLARRS------NSLLKYITQK 97 (107)
T ss_dssp HHHHHHHHHHHHHTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTTC------HHHHHHHHHH
T ss_pred HHHHHHHHHhhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCcCCHHHHHHHHHhC------HHHHHHHHHH
Confidence 68999999874 689999999999999999999999999999999999999999999999884 4444445444
Q ss_pred HH
Q psy13186 100 KI 101 (170)
Q Consensus 100 Ke 101 (170)
.+
T Consensus 98 ~~ 99 (107)
T 3b0b_B 98 SD 99 (107)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 25
>2yfv_A Histone H3-like centromeric protein CSE4; cell cycle, kinetochore, centromere, histone chaperone, BUDD; 2.32A {Kluyveromyces lactis nrrl y-1140} PDB: 2yfw_A
Probab=98.46 E-value=5.4e-07 Score=66.91 Aligned_cols=68 Identities=13% Similarity=0.213 Sum_probs=58.8
Q ss_pred cccccCcHHHHHHHHHhhCC-------CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHH
Q psy13186 13 DDELILPRASINKIIKEILP-------NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQAL 80 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP-------~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL 80 (170)
..++.||++.+.|+|+++.. +.+++.+|..+|++++..|+.-|...||..|.+.+|+||.+.||--|.
T Consensus 23 st~llIpk~PF~RLVREI~~~~~~~~~~~R~q~~Al~ALQeaaEayLv~Lfeda~l~A~HAkRvTi~~kDiqLa~ 97 (100)
T 2yfv_A 23 STDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLAR 97 (100)
T ss_dssp -----CCHHHHHHHHHHHHHTTC-----CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHH
T ss_pred cchhhhccccHHHHHHHHHHHhccccchhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHH
Confidence 46889999999999999982 689999999999999999999999999999999999999999997664
No 26
>1tzy_C Histone H3; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_C 1hq3_C 2aro_C 2f8n_A 2hio_C 3av1_A 3lel_A 3afa_A 3azi_A 3azj_A 3azk_A 3azl_A 3azm_A 3azn_A 2cv5_A* 1u35_A* 2nqb_A 2io5_B 2pyo_A* 3c9k_C ...
Probab=98.36 E-value=1.7e-06 Score=67.48 Aligned_cols=72 Identities=14% Similarity=0.250 Sum_probs=65.6
Q ss_pred cccccCcHHHHHHHHHhhC----CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 13 DDELILPRASINKIIKEIL----PNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~L----P~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
..++.||++.+.|||+++. ++.+++.+|..+|++++..|+.-|...||..|.+.+|+||.+.||--|..--|
T Consensus 58 st~lLIpk~PF~RLVREI~~~~~~~~R~q~~Al~aLQeaaEayLv~Lfeda~l~A~HAkRvTi~~kDiqLa~rirg 133 (136)
T 1tzy_C 58 STELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 133 (136)
T ss_dssp CCSCCSCHHHHHHHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHT
T ss_pred chhhhhccchHHHHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCcHHhHHHHHHHhC
Confidence 3578999999999999994 47999999999999999999999999999999999999999999988865443
No 27
>3r45_A Histone H3-like centromeric protein A; histone fold, centromere, CENP-A, histone chaperone, hjurp; 2.60A {Homo sapiens}
Probab=98.36 E-value=1e-06 Score=70.12 Aligned_cols=69 Identities=12% Similarity=0.158 Sum_probs=62.7
Q ss_pred cccccCcHHHHHHHHHhhCC------CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 13 DDELILPRASINKIIKEILP------NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP------~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
..++.||++.+.|||+++.. +.+++.+|..+|++++..|+.-|...||..|.+.+|+||.+.||--|..
T Consensus 73 SteLLIpKlPF~RLVREIa~~~~~~~~lRfqs~Al~ALQEAaEayLV~LFEdanLcAiHAkRVTIm~kDIqLArr 147 (156)
T 3r45_A 73 STHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARR 147 (156)
T ss_dssp --CCCSCHHHHHHHHHHHHHTTTTTCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEECHHHHHHHHH
T ss_pred ccccccccccHHHHHHHHHHHhccCccceecHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHHHHH
Confidence 46889999999999999982 5799999999999999999999999999999999999999999987754
No 28
>3nqu_A Histone H3-like centromeric protein A; alpha helix, histone fold, centromere, DNA binding protein; 2.50A {Homo sapiens} PDB: 3an2_A
Probab=98.34 E-value=1.3e-06 Score=68.40 Aligned_cols=73 Identities=12% Similarity=0.170 Sum_probs=64.9
Q ss_pred cccccCcHHHHHHHHHhhC------CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCC
Q psy13186 13 DDELILPRASINKIIKEIL------PNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGF 85 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~L------P~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF 85 (170)
..++.||++.+.|||+++. -+.+++.+|..+|++++..|+.-|...||..|.+.+|+||.+.||--|..--|.
T Consensus 57 st~LLIpKlPF~RLVREI~~~~~~~~~~Rfq~~Al~ALQEAaEayLv~LFEdanlcAiHAkRVTIm~kDiqLArrirg~ 135 (140)
T 3nqu_A 57 STHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRIRGL 135 (140)
T ss_dssp --CCCSCTTHHHHHHHHHHHHHHTTCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHC-
T ss_pred ccccccccccHHHHHHHHHHHhcccccceecHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccHHHHHHHHHhccc
Confidence 4688999999999999998 268999999999999999999999999999999999999999999888765443
No 29
>2nqb_D Histone H2B; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_D*
Probab=98.27 E-value=2.4e-06 Score=65.63 Aligned_cols=65 Identities=15% Similarity=0.295 Sum_probs=60.6
Q ss_pred HHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCC
Q psy13186 21 ASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGF 85 (170)
Q Consensus 21 AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF 85 (170)
..|+|++|++-|++.||.+|..+|+.....+..-|+.+|..+|...+|+||++.||-.|..-|==
T Consensus 37 ~YIyKVLKQVhpd~gISskAm~ImnSfvnDiferIA~EAs~La~~nkr~TitsreIqtAvrLlLp 101 (123)
T 2nqb_D 37 IYIYTVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREIQTAVRLLLP 101 (123)
T ss_dssp HHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCHHHHHHHHHHhCc
Confidence 46899999999999999999999999999999999999999999999999999999999775533
No 30
>1tzy_B Histone H2B; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_B 1hq3_B 2aro_B 2hio_B 3c9k_B 3azg_D 3a6n_D 3an2_D 3av1_D 3av2_D 3ayw_D 3aze_D 3azf_D 3afa_D 3azh_D 3azi_D 3azj_D 3azk_D 3azl_D 3azm_D ...
Probab=98.24 E-value=3e-06 Score=65.32 Aligned_cols=65 Identities=15% Similarity=0.297 Sum_probs=60.6
Q ss_pred HHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCC
Q psy13186 21 ASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGF 85 (170)
Q Consensus 21 AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF 85 (170)
..|+|++|++-|++.||.+|..+|+.....+..-|+.+|..+|...+|+||++.||-.|..-|==
T Consensus 40 ~YIyKVLKQVhpd~gISskAm~ImnSfvnDiferIA~EAs~La~~nkr~TitsreIqtAvrLlLp 104 (126)
T 1tzy_B 40 IYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLP 104 (126)
T ss_dssp HHHHHHHHHHCTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCc
Confidence 36999999999999999999999999999999999999999999999999999999999876533
No 31
>2nqb_C Histone H2A; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_C*
Probab=98.20 E-value=5.6e-06 Score=63.24 Aligned_cols=69 Identities=14% Similarity=0.170 Sum_probs=63.5
Q ss_pred ccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 14 DELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
-.+.||.+.|.|+|++.-..-+|+.+|...|..+...|+..|...|...|...+|++|+|+||..|+..
T Consensus 20 agL~fPV~ri~R~Lk~~~~a~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItp~hi~lAI~n 88 (123)
T 2nqb_C 20 AGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRIIPRHLQLAIRN 88 (123)
T ss_dssp HTCSSCHHHHHHHHHHTTSCSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred CCeeccHHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccHHHHHHHHhc
Confidence 468999999999999974445999999999999999999999999999999999999999999999873
No 32
>2f8n_G Core histone macro-H2A.1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Homo sapiens} SCOP: a.22.1.1 PDB: 1u35_C
Probab=98.19 E-value=6.3e-06 Score=62.70 Aligned_cols=69 Identities=17% Similarity=0.236 Sum_probs=63.9
Q ss_pred ccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 14 DELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
-.+.||.+.|.|+||+.-..-+|+.+|...|..+...|...|...|...|...+|++|+|+||..|+..
T Consensus 19 agLqfPV~ri~R~Lk~~~~a~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~~rItp~hi~lAI~n 87 (120)
T 2f8n_G 19 AGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAVNAARDNKKGRVTPRHILLAVAN 87 (120)
T ss_dssp HTCSSCHHHHHHHHHHHSSSCEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred cCccCChHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEcHHHHHHHHhc
Confidence 478999999999999985556999999999999999999999999999999999999999999999873
No 33
>1tzy_A Histone H2A-IV; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_A 1hq3_A 2aro_A 2hio_A 3c9k_A 3azg_C 3a6n_C 3an2_C 3av1_C 3av2_C 3ayw_C 3aze_C 3azf_C 3afa_C 3azh_C 3azi_C 3azj_C 3azk_C 3azl_C 3azm_C ...
Probab=98.17 E-value=6.9e-06 Score=63.25 Aligned_cols=69 Identities=14% Similarity=0.168 Sum_probs=63.7
Q ss_pred ccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 14 DELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
-.+.||.+.|.|+|++.-..-+|+.+|...|..+...|+..|...|...|...+|++|+|+||..|+..
T Consensus 22 agLqfPV~rI~R~Lk~~~~a~RVs~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItp~hi~lAI~n 90 (129)
T 1tzy_A 22 AGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRN 90 (129)
T ss_dssp HTCSSCHHHHHHHHHHTTSSSEECTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred CceeccHHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHhc
Confidence 478999999999999974445999999999999999999999999999999999999999999999873
No 34
>1id3_C Histone H2A.1; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=98.13 E-value=7.1e-06 Score=63.34 Aligned_cols=70 Identities=13% Similarity=0.178 Sum_probs=64.1
Q ss_pred cccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 13 DDELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
--.+.||.+.|.|+||+.-..-+|+.+|...|..+...|+..|...|...|...+|++|+|+||-.|+..
T Consensus 21 ragLqfPV~rI~R~Lk~~~~a~RVs~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItp~hI~lAI~n 90 (131)
T 1id3_C 21 KAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRN 90 (131)
T ss_dssp GGTCSSCHHHHHHHHHTTCSCSEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHT
T ss_pred cCCeecCHHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEcHHHHHHHHhc
Confidence 4578999999999999974445999999999999999999999999999999999999999999999873
No 35
>1f66_C Histone H2A.Z; nucleosome, chromatin, histone variant, protein DNA interaction, nucleoprotein, supercoiled DNA, complex (nucleosome core/DNA); 2.60A {Homo sapiens} SCOP: a.22.1.1
Probab=98.11 E-value=1.1e-05 Score=62.15 Aligned_cols=69 Identities=16% Similarity=0.148 Sum_probs=63.6
Q ss_pred ccccCcHHHHHHHHHhhCC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 14 DELILPRASINKIIKEILP-NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP-~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
-.+.||.+.|.|+|++.-. ..+|+.+|...+..+...|...|...|...|...+|++|+|+||..|+..
T Consensus 24 agLqfPV~ri~R~Lk~~~~a~~RV~~~A~VyLaAvLEyL~aEIlelAgn~A~~~k~krItprhi~lAI~n 93 (128)
T 1f66_C 24 AGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRG 93 (128)
T ss_dssp HTCSSCHHHHHHHHHHTSCSSCEECTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSEECHHHHHHHHHH
T ss_pred CCccCChHHHHHHHHHcccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHhc
Confidence 4789999999999999864 35999999999999999999999999999999999999999999999874
No 36
>2ly8_A Budding yeast chaperone SCM3; centromere protein, CENH3 variants, partially unfolded; NMR {Saccharomyces cerevisiae}
Probab=98.08 E-value=5.9e-06 Score=63.26 Aligned_cols=54 Identities=20% Similarity=0.259 Sum_probs=47.8
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCcc
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGDY 88 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~y 88 (170)
|||.++.+.+.....+|+.-|...|...|++.+||||+++||.-||+..|-.=|
T Consensus 64 RIS~~iy~e~r~vl~~~l~~i~rdav~yaehA~RKTVta~DV~~Alkr~G~~ly 117 (121)
T 2ly8_A 64 RISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQGRTLY 117 (121)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCHHHHHHHHHHTTCGGG
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHHhCCCcCC
Confidence 688888888888888889899999999999999999999999999999886533
No 37
>1taf_A TFIID TBP associated factor 42; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=98.07 E-value=1.9e-05 Score=54.80 Aligned_cols=60 Identities=22% Similarity=0.262 Sum_probs=54.8
Q ss_pred HHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 22 SINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 22 tV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
.|.+|+|+.. --+++.++...|.+.+..++.-|...|...|.+.|||||+.+||--|++.
T Consensus 6 ~i~~iLk~~G-~~~~~~~v~~~L~e~~~ry~~~il~dA~~~a~HAgrktv~~eDVkLAi~~ 65 (68)
T 1taf_A 6 VIMSILKELN-VQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVRLATEV 65 (68)
T ss_dssp HHHHHHHHTT-CCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHCC-CcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHh
Confidence 6888999873 23899999999999999999999999999999999999999999988864
No 38
>2f8n_K Histone H2A type 1; nucleosome, NCP, macroh2A, histone variant, chromatin, X- RAY structure, crystallography, structural protein/DNA complex; 2.90A {Mus musculus} SCOP: a.22.1.1
Probab=98.06 E-value=1.4e-05 Score=63.15 Aligned_cols=69 Identities=14% Similarity=0.174 Sum_probs=63.6
Q ss_pred ccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 14 DELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
-.+.||.+.|.|+||+.-..-+|+.+|...|..+...|+..|...|...|...+|++|+|+||..|+..
T Consensus 41 agLqFPVgrI~R~LK~~~~a~RVs~~A~VyLAAVLEYL~aEILelAgn~A~~~krkrItprhI~lAI~n 109 (149)
T 2f8n_K 41 AGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRN 109 (149)
T ss_dssp HTCSSCHHHHHHHHHHTTSCSEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred CCeeccHHHHHHHHHccccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHhc
Confidence 468999999999999975456999999999999999999999999999999999999999999999873
No 39
>2jss_A Chimera of histone H2B.1 and histone H2A.Z; histone/chaperone complex, intrinsically unfolded protein, chaperone/structural protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.22.1.1 a.22.1.1
Probab=98.02 E-value=5e-05 Score=61.49 Aligned_cols=63 Identities=21% Similarity=0.364 Sum_probs=59.8
Q ss_pred HHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 21 ASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 21 AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
.-|+|++|++-|++.||.+|...|...+..+..-|+.+|...+...+|+||++.||-.|++-+
T Consensus 7 ~yi~kvLkqv~p~~~iS~~Am~~m~s~v~di~~rIa~eA~~L~~~~~r~Tit~~eIq~Avrl~ 69 (192)
T 2jss_A 7 SYIYKVLKQTHPDTGISQKSMSILNSFVNDIFERIATEASKLAAYNKKSTISAREIQTAVRLI 69 (192)
T ss_dssp HHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHcccCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHh
Confidence 469999999999999999999999999999999999999999999999999999999998744
No 40
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=97.88 E-value=7.3e-05 Score=53.45 Aligned_cols=70 Identities=16% Similarity=0.262 Sum_probs=62.2
Q ss_pred cccccCcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 13 DDELILPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
+++..+|..+|.||++.... .+||++||..++.+....||.--...|...+..++-..|..+|+-+.+-.
T Consensus 4 ~~~~~~~~~lI~ril~~~f~~~ktrI~~dAl~l~aeyl~iFV~EAv~RA~~~a~~e~~~~le~~~LEki~pq 75 (81)
T 3b0b_C 4 EREGGFRKETVERLLRLHFRDGRTRVNGDALLLMAELLKVFVREAAARAARQAQAEDLEKVDIEHVEKVLPQ 75 (81)
T ss_dssp ---CCCCHHHHHHHHHHHCCSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeecHHHHHHHHHH
Confidence 45778999999999999997 69999999999999999999999999999999999999999999886654
No 41
>2jss_A Chimera of histone H2B.1 and histone H2A.Z; histone/chaperone complex, intrinsically unfolded protein, chaperone/structural protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.22.1.1 a.22.1.1
Probab=97.84 E-value=4.2e-05 Score=61.97 Aligned_cols=69 Identities=16% Similarity=0.200 Sum_probs=63.4
Q ss_pred ccccCcHHHHHHHHHhhCC-CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 14 DELILPRASINKIIKEILP-NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP-~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
-.+.||.+.|.|+||+.-. ..+|+.+|...|..+...|+..|...|...|...+|++|+|+||-.|+..
T Consensus 102 agl~fPv~ri~R~lk~~~~a~~Rv~~~A~vyLaavLEyl~~eIlelA~n~a~~~~~~~I~p~~i~lAi~n 171 (192)
T 2jss_A 102 AGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRG 171 (192)
T ss_dssp SSCCSCHHHHHHHHHHTTCSSCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHT
T ss_pred CCCcCCHHHHHHHHHhcCccccccccChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHhc
Confidence 4689999999999999743 46999999999999999999999999999999999999999999999873
No 42
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=97.84 E-value=0.0001 Score=53.14 Aligned_cols=71 Identities=8% Similarity=0.182 Sum_probs=62.4
Q ss_pred cccccCcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 13 DDELILPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 13 ~ddl~LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
..+..+|..+|.||++...- .+|||+||..++.+....||.--...|...+..++-.+|..+|+-+.+-.|
T Consensus 8 ~~~~~i~~~li~ril~~~F~~~kTkIs~dAl~l~aeyl~iFV~EAv~RA~~~a~~e~~~~le~e~LEki~pQL 80 (84)
T 4dra_E 8 GAGSGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAEDALRVDVDQLEKVLPQL 80 (84)
T ss_dssp ---CCCCHHHHHHHHHTTCSSTTCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHH
Confidence 45678999999999998884 699999999999999999999999999999999999999999998876543
No 43
>1h3o_B Transcription initiation factor TFIID 20/15 kDa subunits; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=97.83 E-value=0.00012 Score=51.86 Aligned_cols=66 Identities=17% Similarity=0.443 Sum_probs=62.6
Q ss_pred cCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 17 ILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
-|++..+..+|+++-|+..+..++-++|.+.|.+||.-+++.|...|++.+-.||.+.||.-.|+.
T Consensus 5 vl~k~~L~~Lv~~idp~~~ld~~vee~ll~lADdFV~~V~~~ac~lAKhR~s~~le~kDvql~Ler 70 (76)
T 1h3o_B 5 VLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKDVQLHLER 70 (76)
T ss_dssp SSCHHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHH
T ss_pred cccHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccHHHHHHHHHh
Confidence 479999999999999999999999999999999999999999999999999999999999887764
No 44
>1bh9_B TAFII28; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_B*
Probab=97.64 E-value=0.00027 Score=51.21 Aligned_cols=68 Identities=21% Similarity=0.361 Sum_probs=61.5
Q ss_pred cCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CCccchhhHHHHHhhcCC
Q psy13186 17 ILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQ-KKTINAEHVLQALDQLGF 85 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~-RKTIs~edVl~AL~~LgF 85 (170)
.||+++|.|||...+ +..++.+...+|.=.+.+||.-|..+|.+++...+ ..-|.|.||-.|...|.-
T Consensus 16 ~f~k~~vKrl~~~~~-~~~v~~~v~i~v~glaKvfVgelVE~A~~V~~~~~~~~Pl~P~HireA~rrl~~ 84 (89)
T 1bh9_B 16 AFPKAAIKRLIQSIT-GTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLKS 84 (89)
T ss_dssp CCCHHHHHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHc-CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHH
Confidence 799999999999988 78999999999999999999999999999998765 558999999999887643
No 45
>2l5a_A Histone H3-like centromeric protein CSE4, protein histone H4; A single chain of CSE4+SCM3+H4, fusion protein; NMR {Saccharomyces cerevisiae}
Probab=97.59 E-value=7.6e-05 Score=62.75 Aligned_cols=51 Identities=20% Similarity=0.264 Sum_probs=49.0
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 34 IRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 34 ~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
-+||.++.+.+......|+.-|...|...|++.+||||+++||.-||+.+|
T Consensus 177 kRIS~~iyeelr~vLe~fle~IirdAv~yaeHA~RKTVta~DV~~ALKr~g 227 (235)
T 2l5a_A 177 KRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVYALKRQG 227 (235)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHHhcC
Confidence 389999999999999999999999999999999999999999999999765
No 46
>2l5a_A Histone H3-like centromeric protein CSE4, protein histone H4; A single chain of CSE4+SCM3+H4, fusion protein; NMR {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.0054 Score=51.53 Aligned_cols=71 Identities=13% Similarity=0.213 Sum_probs=61.9
Q ss_pred ccccCcHHHHHHHHHhhCC-------CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 14 DELILPRASINKIIKEILP-------NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP-------~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
..+.+|+....|+++++.. +.++...|..+|++++.-|+.-|-..+|-.|.+.+|-||.|.|+--|..--|
T Consensus 8 ~~~lI~KlPFqRLVREIaq~~~~~~~~lRfqs~Al~ALQEAaEayLV~LFEd~nLcaiHAkRVTim~kDiqLarrirg 85 (235)
T 2l5a_A 8 KKLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKRITIMKKDMQLARRIRG 85 (235)
T ss_dssp ---CCSCCHHHHHHHHHHHTSCGGGTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSGGGTTHHHHHHTSSC
T ss_pred ccccccCccHHHHHHHHHHHhccCCccceecHHHHHHHHHHHHHHHHHHHhhhHHHHhcccccccchhhHHHHHHHhh
Confidence 4688999999999999863 4799999999999999999999999999999999999999999988865544
No 47
>3v9r_B MHF2, uncharacterized protein YDL160C-A; histone fold, fanconi anemia, DNA repair, DNA BI protein; 2.40A {Saccharomyces cerevisiae}
Probab=96.20 E-value=0.01 Score=43.10 Aligned_cols=48 Identities=15% Similarity=0.214 Sum_probs=42.1
Q ss_pred CcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy13186 18 LPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNE 65 (170)
Q Consensus 18 LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~ 65 (170)
||+.+|.||++.... ++||++||..++.+....||.--...|.+..+.
T Consensus 2 ip~~llaRIL~~~F~~~kTrIt~da~~lv~kY~diFVrEAv~Rs~e~ke~ 51 (88)
T 3v9r_B 2 LSKEALIKILSQNEGGNDMKIADEVVPMIQKYLDIFIDEAVLRSLQSHKD 51 (88)
T ss_dssp CCSHHHHHHHTTTSCSSCCEECTTTHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhCCCCceecHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 799999999998775 799999999999999999999888877765544
No 48
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=90.91 E-value=0.61 Score=38.32 Aligned_cols=65 Identities=5% Similarity=0.250 Sum_probs=50.8
Q ss_pred CcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHH----HHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 18 LPRASINKIIKEILP--NIRVANESRELVMNCCM----EFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 18 LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~----eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
++...+..|++..+. ++.++.++.+.|.+.+. -.+.-+...|...|...++.+|+.+||..|+..
T Consensus 259 ~~~~e~~~il~~~~~~~~~~~~~~~l~~l~~~~~~G~~r~~~~ll~~a~~~A~~~~~~~It~~~v~~a~~~ 329 (368)
T 3uk6_A 259 YSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSL 329 (368)
T ss_dssp CCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 456677778877664 67899999999988775 244445556777788889999999999999986
No 49
>2ly8_A Budding yeast chaperone SCM3; centromere protein, CENH3 variants, partially unfolded; NMR {Saccharomyces cerevisiae}
Probab=89.10 E-value=0.9 Score=34.40 Aligned_cols=62 Identities=10% Similarity=0.227 Sum_probs=49.7
Q ss_pred CcHHHHHHHHHhhC----C---CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCCccchhhHHHHH
Q psy13186 18 LPRASINKIIKEIL----P---NIRVANESRELVMNCCMEFIHLISSEANDICNE---QQKKTINAEHVLQAL 80 (170)
Q Consensus 18 LP~AtV~riiKe~L----P---~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~---~~RKTIs~edVl~AL 80 (170)
+|+....|+++++. + +.++..+|..+|++++.-|+.-+-..+|-.|.+ .|=|.||.+ +...+
T Consensus 2 I~klPF~RLVREI~~~~~~~~~~lRfq~~Al~ALQeAsEayLV~lFEd~nlcaiHA~~gGvkRIS~~-iy~e~ 73 (121)
T 2ly8_A 2 ISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHLVPRGSKRISGL-IYEEV 73 (121)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCSSCCSSC-HHHHH
T ss_pred CCccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHHHHHHHHHHHHHhHHHHcCCccCccchhHH-HHHHH
Confidence 68888889888764 3 589999999999999999999999999987765 455777764 44443
No 50
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=85.24 E-value=1.8 Score=37.61 Aligned_cols=65 Identities=18% Similarity=0.205 Sum_probs=50.1
Q ss_pred CcHHHHHHHHHhhCC--CCcccHHHHHHHHHHH-H---HHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 18 LPRASINKIIKEILP--NIRVANESRELVMNCC-M---EFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 18 LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~-~---eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
++..-+..+++..+. ++.++.++...|.+.| . -....+...|..+|...++.+|+++||..|+.-
T Consensus 366 ~~~~e~~~iL~~~~~~~~~~~~~~~~~~i~~~a~~g~~r~a~~ll~~a~~~A~~~~~~~v~~~~v~~~~~~ 436 (456)
T 2c9o_A 366 YTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISEL 436 (456)
T ss_dssp CCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHHHSCHHHHHHTHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCHHHHHHHHHHHHHHHhhcCCCccCHHHHHHHHHH
Confidence 445667777776654 6789999999888876 1 245555677888899999999999999999765
No 51
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=83.47 E-value=2.8 Score=33.91 Aligned_cols=65 Identities=12% Similarity=0.134 Sum_probs=49.6
Q ss_pred HHHHHHHHHhhC----CCCcccHHHHHHHHHHHH------HHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 20 RASINKIIKEIL----PNIRVANESRELVMNCCM------EFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 20 ~AtV~riiKe~L----P~~~iSkdA~e~i~~c~~------eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
...+..|++..+ ++..++.++.+.|.+.+. -.+.-+...|...|...++.+|+.+||-.|+..+.
T Consensus 203 ~~~~~~il~~~~~~~~~~~~~~~~~~~~l~~~~~~~~G~~r~~~~~l~~a~~~a~~~~~~~i~~~~v~~a~~~~~ 277 (387)
T 2v1u_A 203 APQLRDILETRAEEAFNPGVLDPDVVPLCAALAAREHGDARRALDLLRVAGEIAERRREERVRREHVYSARAEIE 277 (387)
T ss_dssp HHHHHHHHHHHHHHHBCTTTBCSSHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHh
Confidence 566666666544 457789999988888776 34455566677888888999999999999998874
No 52
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=81.18 E-value=15 Score=29.79 Aligned_cols=77 Identities=12% Similarity=0.102 Sum_probs=55.3
Q ss_pred CcHHHHHHHHHhhCC----CCcccHHHHHHHHHHH------------HHHHHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 18 LPRASINKIIKEILP----NIRVANESRELVMNCC------------MEFIHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 18 LP~AtV~riiKe~LP----~~~iSkdA~e~i~~c~------------~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
|+...+..+++..+. ...++.++...|.+.+ --++..+...|...|...++.+|+.+||..|+.
T Consensus 193 l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~G~~r~~~~~l~~a~~~a~~~~~~~i~~~~v~~~~~ 272 (389)
T 1fnn_A 193 YTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSK 272 (389)
T ss_dssp CBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCTTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhhcccCCCCCCcHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHHH
Confidence 344566666666543 3478999998888877 233455556677888888999999999999999
Q ss_pred hcCCCccHHHHHH
Q psy13186 82 QLGFGDYKSEAEE 94 (170)
Q Consensus 82 ~LgF~~yi~~l~~ 94 (170)
.+....+...+..
T Consensus 273 ~~~~~~~~~~l~~ 285 (389)
T 1fnn_A 273 EVLFGISEEVLIG 285 (389)
T ss_dssp HHSCCCCHHHHHH
T ss_pred HHhhhhHHHHHHc
Confidence 8876665554443
No 53
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=79.36 E-value=6.2 Score=31.72 Aligned_cols=69 Identities=9% Similarity=0.092 Sum_probs=50.5
Q ss_pred CcHHHHHHHHHhh----CCCCcccHHHHHHHHHHHH------HHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCC
Q psy13186 18 LPRASINKIIKEI----LPNIRVANESRELVMNCCM------EFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFG 86 (170)
Q Consensus 18 LP~AtV~riiKe~----LP~~~iSkdA~e~i~~c~~------eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~ 86 (170)
|+...+..+++.. ++...++.++...|.+.+. -.+.-+...|...|...++.+|+.+||..|+..+...
T Consensus 197 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~l~~~~~~~~G~~r~~~~ll~~a~~~a~~~~~~~i~~~~v~~a~~~~~~~ 275 (386)
T 2qby_A 197 YNAEELEDILTKRAQMAFKPGVLPDNVIKLCAALAAREHGDARRALDLLRVSGEIAERMKDTKVKEEYVYMAKEEIERD 275 (386)
T ss_dssp CCHHHHHHHHHHHHHHHBCSSCSCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHhhc
Confidence 4456667777654 3456789999888887765 2333456677888888899999999999999887543
No 54
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=79.04 E-value=6.9 Score=38.22 Aligned_cols=68 Identities=15% Similarity=0.214 Sum_probs=48.1
Q ss_pred ccccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 14 DELILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
-.+.+|-..|.|++|... .-||+..|...+.-...-...-|---|-..|...+++.|+|.||..|+..
T Consensus 101 ~~l~~pv~~~~~~l~~~~-~~r~~~~~~~y~~avleyl~~~~l~la~~~~~~~~~~~i~p~~~~~ai~~ 168 (1049)
T 3ksy_A 101 NPLSLPVEKIHPLLKEVL-GYKIDHQVSVYIVAVLEYISADILKLVGNYVRNIRHYEITKQDIKVAMCA 168 (1049)
T ss_dssp SSCSSCHHHHHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCHHHHHHHHHH
T ss_pred CCccccHHHHHHHhhccc-ccccCCCCcchhHHHHHHHHHHHHHHHHHHHHHcCCceecCccccccccC
Confidence 468899999999996655 45999888777655433333333334445566688889999999988754
No 55
>1khy_A CLPB protein; alpha helix, chaperone; 1.95A {Escherichia coli} SCOP: a.174.1.1
Probab=74.11 E-value=8.6 Score=27.65 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=30.7
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
++|..++.+|.. |...|...+...|.++|++.||=.-+
T Consensus 5 ~~t~~~~~~l~~------------A~~~A~~~~~~~i~~eHlLlaLl~~~ 42 (148)
T 1khy_A 5 RLTNKFQLALAD------------AQSLALGHDNQFIEPLHLMSALLNQE 42 (148)
T ss_dssp CBCHHHHHHHHH------------HHHHHHHTTCSSBCHHHHHHHHHTCT
T ss_pred hhhHHHHHHHHH------------HHHHHHHcCCCccCHHHHHHHHHcCC
Confidence 567777777744 77889999999999999999985544
No 56
>3fh2_A Probable ATP-dependent protease (heat shock prote; struct genomics, PSI2, MCSG, protein structure initiative; 1.60A {Corynebacterium glutamicum}
Probab=73.58 E-value=4.5 Score=29.63 Aligned_cols=37 Identities=22% Similarity=0.338 Sum_probs=30.4
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
++|..++.+|.. |...|...+...|.++|++.||=.-
T Consensus 6 ~~t~~~~~~l~~------------A~~~A~~~~~~~i~~eHLLlaLl~~ 42 (146)
T 3fh2_A 6 RFTDRARRVIVL------------AQEEARMLNHNYIGTEHILLGLIHE 42 (146)
T ss_dssp GBCHHHHHHHHH------------HHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred hcCHHHHHHHHH------------HHHHHHHcCCCCchHHHHHHHHHhC
Confidence 567777777744 7788999999999999999998654
No 57
>2y1q_A CLPC N-domain, negative regulator of genetic competence CLPC/MEC; transcription, proteolysis; 1.50A {Bacillus subtilis} PDB: 2y1r_A* 2k77_A
Probab=73.44 E-value=4 Score=29.61 Aligned_cols=38 Identities=21% Similarity=0.332 Sum_probs=30.5
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
+++..++.+|.. |...|...+...|.++|++.||=.-+
T Consensus 5 ~~t~~~~~al~~------------A~~~A~~~~h~~i~~eHlLlaLl~~~ 42 (150)
T 2y1q_A 5 RFTERAQKVLAL------------AQEEALRLGHNNIGTEHILLGLVREG 42 (150)
T ss_dssp CBCHHHHHHHHH------------HHHHHHHTTCSEECHHHHHHHHHHHC
T ss_pred hhCHHHHHHHHH------------HHHHHHHcCCCCccHHHHHHHHHhCC
Confidence 577777777744 77889999999999999999985443
No 58
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=72.37 E-value=8.3 Score=27.98 Aligned_cols=63 Identities=11% Similarity=0.192 Sum_probs=42.6
Q ss_pred cCcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 17 ILPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
.++...+..+++..+. +..++.++...|.+.+.--+..+-......+... ++|+.+||-.++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~r~l~~~l~~~~~~~--~~I~~~~v~~~~~ 224 (226)
T 2chg_A 160 PVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIG--EVVDADTIYQITA 224 (226)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--SCBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC--ceecHHHHHHHhc
Confidence 3456667777777664 5678899888887776544444444444444433 6999999998875
No 59
>3kw6_A 26S protease regulatory subunit 8; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Homo sapiens}
Probab=72.11 E-value=4 Score=26.96 Aligned_cols=59 Identities=10% Similarity=0.115 Sum_probs=37.8
Q ss_pred HHHHhhCCCCcccHH-HHHHHHHHHHHH----HHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 25 KIIKEILPNIRVANE-SRELVMNCCMEF----IHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 25 riiKe~LP~~~iSkd-A~e~i~~c~~eF----I~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
.|++-.+.++.++.+ -.+.|.+.+.-| |..|..+|.-.|-..++..|+.+|+..||+.+
T Consensus 10 ~Il~~~l~~~~~~~~~dl~~la~~t~G~SGADi~~l~~eA~~~a~~~~~~~i~~~d~~~Al~~v 73 (78)
T 3kw6_A 10 DILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 73 (78)
T ss_dssp HHHHHHHTTSEECTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHH
Confidence 444444444444332 133344433333 66677778888888899999999999999864
No 60
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=71.71 E-value=12 Score=30.10 Aligned_cols=53 Identities=11% Similarity=0.168 Sum_probs=40.7
Q ss_pred CCCCcccHHHHHHHHHHHHH-------HHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 31 LPNIRVANESRELVMNCCME-------FIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 31 LP~~~iSkdA~e~i~~c~~e-------FI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
.+++.++.++.+.|.+.+.- -+..+...|...|...++.+|+.+||..|+..+
T Consensus 263 ~~~~~ls~~~~~~l~~~~~~~~~~~~R~~~~ll~~a~~~A~~~~~~~v~~~~v~~a~~~~ 322 (350)
T 1g8p_A 263 LPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMA 322 (350)
T ss_dssp GGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHcCCCcCCHHHHHHHHHHH
Confidence 34678999999999887643 344455567777888899999999999887754
No 61
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=70.70 E-value=11 Score=30.70 Aligned_cols=65 Identities=14% Similarity=0.073 Sum_probs=45.3
Q ss_pred CcHHHHHHHHHhh----CCCCcccHHHHHHHHHHHH---H---HHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 18 LPRASINKIIKEI----LPNIRVANESRELVMNCCM---E---FIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 18 LP~AtV~riiKe~----LP~~~iSkdA~e~i~~c~~---e---FI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
|+...+..|++.. +++..++.++...|.+.|. - .+.-+...|...|. +..+|+.+||..|+..+.
T Consensus 197 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~i~~~~~~~~G~~r~a~~~l~~a~~~a~--~~~~i~~~~v~~~~~~~~ 271 (384)
T 2qby_B 197 YDAEQLKFILSKYAEYGLIKGTYDDEILSYIAAISAKEHGDARKAVNLLFRAAQLAS--GGGIIRKEHVDKAIVDYE 271 (384)
T ss_dssp CCHHHHHHHHHHHHHHTSCTTSCCSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT--SSSCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhcccCCcCHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHhc--CCCccCHHHHHHHHHHHh
Confidence 4456677777764 4457889999888888775 1 22333444556665 678999999999998873
No 62
>3fes_A ATP-dependent CLP endopeptidase; alpha-helical bundles, structural genomics, PSI-2, protein S initiative; HET: PG4 EPE; 1.82A {Clostridium difficile}
Probab=70.56 E-value=5.1 Score=29.38 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=31.5
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
++|..++.+|.. |...|...+...|.++|++.||=.-+
T Consensus 7 ~~T~~a~~~l~~------------A~~~A~~~~~~~i~~eHLLlaLl~~~ 44 (145)
T 3fes_A 7 RFTQRAKKAIDL------------AFESAKSLGHNIVGSEHILLGLLREE 44 (145)
T ss_dssp CBCHHHHHHHHH------------HHHHHHHTTCSEECHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHH------------HHHHHHHcCCCCccHHHHHHHHHhCC
Confidence 578888888854 77789999999999999999986544
No 63
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=67.77 E-value=9.4 Score=27.88 Aligned_cols=62 Identities=15% Similarity=0.139 Sum_probs=42.2
Q ss_pred CcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHH
Q psy13186 18 LPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQAL 80 (170)
Q Consensus 18 LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL 80 (170)
|+...+..+++..+. ++.++.++...|.+.|.--..++-......+. .++++|+.+||-.++
T Consensus 185 l~~~e~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G~~~~~~~~~~~~~~-~~~~~i~~~~v~~~~ 248 (250)
T 1njg_A 185 LDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIA-SGDGQVSTQAVSAML 248 (250)
T ss_dssp CCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHT-TTTSSBCHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHh-ccCceecHHHHHHHh
Confidence 445667777776664 57888998888888776555555554444443 345589999998876
No 64
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=66.45 E-value=41 Score=30.21 Aligned_cols=49 Identities=22% Similarity=0.241 Sum_probs=39.1
Q ss_pred CcccHHHHHHHHHHHH-------------HHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 34 IRVANESRELVMNCCM-------------EFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 34 ~~iSkdA~e~i~~c~~-------------eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
..++.++...|.+.++ --+.-|...|..+|...++.+|+++||..|+..
T Consensus 313 ~~ls~eAl~~Li~~~~r~~g~r~~l~~~~R~l~~llr~A~~~A~~~~~~~I~~edv~~A~~~ 374 (604)
T 3k1j_A 313 PHFTKEAVEEIVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVEREDVIEAVKM 374 (604)
T ss_dssp CCBBHHHHHHHHHHHHHTTCSTTEEECCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhhhhccccccccCHHHHHHHHHHHHHHHHhcCcccccHHHHHHHHHh
Confidence 5789999988888653 233445556889999999999999999999964
No 65
>1k6k_A ATP-dependent CLP protease ATP-binding subunit CLPA; chaperone, ATPase, adaptor binding, X-RAY, structure, N-domain, hydrolase; 1.80A {Escherichia coli} SCOP: a.174.1.1 PDB: 1r6c_X 1r6o_A* 1r6q_A* 1mg9_B* 1lzw_B* 1mbx_A* 1mbv_A 1mbu_A*
Probab=66.40 E-value=4.8 Score=28.93 Aligned_cols=34 Identities=24% Similarity=0.192 Sum_probs=26.9
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 36 VANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 36 iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
+|..++.+|. .|...|...+...|.++|++.||=
T Consensus 2 ~t~~~~~~l~------------~A~~~A~~~~~~~i~~eHlLlaLl 35 (143)
T 1k6k_A 2 LNQELELSLN------------MAFARAREHRHEFMTVEHLLLALL 35 (143)
T ss_dssp BCHHHHHHHH------------HHHHHHHHHTBSEECHHHHHHHHT
T ss_pred CCHHHHHHHH------------HHHHHHHHcCCCCcCHHHHHHHHH
Confidence 5566666664 477788888999999999999983
No 66
>3aji_B S6C, proteasome (prosome, macropain) 26S subunit, ATPA; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dwz_B* 2dvw_B*
Probab=62.67 E-value=8.5 Score=25.53 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 52 IHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 52 I~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
|..|..+|.-.|-..++.+|+.+|+..|++..-
T Consensus 40 i~~l~~eA~~~a~~~~~~~i~~~df~~Al~~~~ 72 (83)
T 3aji_B 40 INSICQESGMLAVRENRYIVLAKDFEKAYKTVI 72 (83)
T ss_dssp HHHHHHHHHHGGGTSCCSSBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhccCCcCHHHHHHHHHHHc
Confidence 334556677788888899999999999998764
No 67
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=60.33 E-value=46 Score=26.70 Aligned_cols=51 Identities=4% Similarity=0.113 Sum_probs=33.8
Q ss_pred CCcccHHHHHHHHHHHHHH-----------------------HHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 33 NIRVANESRELVMNCCMEF-----------------------IHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 33 ~~~iSkdA~e~i~~c~~eF-----------------------I~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
++.++.++.+.|.+.+... ...+...|...|.-.++..|+++||..|+...
T Consensus 224 ~v~~~~~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~~~s~R~~~~ll~~a~a~A~l~g~~~v~~~dv~~~~~~v 297 (331)
T 2r44_A 224 KVTISESLEKYIIELVFATRFPAEYGLEAEASYILYGASTRAAINLNRVAKAMAFFNNRDYVLPEDIKEVAYDI 297 (331)
T ss_dssp TCBCCHHHHHHHHHHHHHHHSGGGGTCHHHHHHEEECCCHHHHHHHHHHHHHHHHHTTCSBCCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhccccccccccccccccCcChhHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Confidence 4667888887776654321 12233445566777888889999998887653
No 68
>2dzn_B 26S protease regulatory subunit 6B homolog; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} PDB: 2dzo_B
Probab=60.25 E-value=10 Score=25.28 Aligned_cols=30 Identities=13% Similarity=-0.035 Sum_probs=23.0
Q ss_pred HHHHHHHhhCCCCccchhhHHHHHhhcCCC
Q psy13186 57 SEANDICNEQQKKTINAEHVLQALDQLGFG 86 (170)
Q Consensus 57 seAnei~~~~~RKTIs~edVl~AL~~LgF~ 86 (170)
.+|.-.|-..++..|+.+|+..|++..-.+
T Consensus 42 ~eAa~~ai~~~~~~i~~~df~~Al~~v~~~ 71 (82)
T 2dzn_B 42 QEAGLRAVRKNRYVILQSDLEEAYATQVKT 71 (82)
T ss_dssp HHHHHHHHHTTCSEECHHHHHHHHHTTCC-
T ss_pred HHHHHHHHHhccCCcCHHHHHHHHHHHHcC
Confidence 345566777788999999999999987443
No 69
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=59.56 E-value=20 Score=29.54 Aligned_cols=67 Identities=16% Similarity=0.350 Sum_probs=44.7
Q ss_pred HHHHHHHHhhCC--CCcccHHHHHHHHHHHH---HHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCCc
Q psy13186 21 ASINKIIKEILP--NIRVANESRELVMNCCM---EFIHLISSEANDICNEQQKKTINAEHVLQALDQLGFGD 87 (170)
Q Consensus 21 AtV~riiKe~LP--~~~iSkdA~e~i~~c~~---eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~~ 87 (170)
..+..|++...- ++.++.++...|.+.+. -.+.-+...+.+.|...++..|+.++|-.||..++++.
T Consensus 183 ~~l~~iL~~~~~~~~~~~~~~~~~~ia~~~~G~~R~a~~ll~~~~~~a~~~~~~~It~~~v~~al~~~~~~~ 254 (334)
T 1in4_A 183 KELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDD 254 (334)
T ss_dssp HHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHcCCCcCHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHhCCCc
Confidence 355666665432 56788888777766532 22333334556667667788999999999999987653
No 70
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=59.01 E-value=6.9 Score=26.16 Aligned_cols=23 Identities=17% Similarity=0.202 Sum_probs=19.8
Q ss_pred cchhhHHHHHhhcCCCccHHHHH
Q psy13186 71 INAEHVLQALDQLGFGDYKSEAE 93 (170)
Q Consensus 71 Is~edVl~AL~~LgF~~yi~~l~ 93 (170)
=++++|..-|..+||+.|++...
T Consensus 5 Ws~~~V~~WL~~lgl~~Y~~~F~ 27 (76)
T 2f3n_A 5 WSKFDVGDWLESIHLGEHRDRFE 27 (76)
T ss_dssp CCHHHHHHHHHHTTCGGGHHHHH
T ss_pred CCHHHHHHHHHHCCCHHHHHHHH
Confidence 47899999999999999987654
No 71
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=54.82 E-value=8.8 Score=25.93 Aligned_cols=24 Identities=25% Similarity=0.303 Sum_probs=20.6
Q ss_pred ccchhhHHHHHhhcCCCccHHHHH
Q psy13186 70 TINAEHVLQALDQLGFGDYKSEAE 93 (170)
Q Consensus 70 TIs~edVl~AL~~LgF~~yi~~l~ 93 (170)
.=++++|..-|..+||+.|++...
T Consensus 9 ~Ws~~~V~~WL~~lgl~~Y~~~F~ 32 (81)
T 3bq7_A 9 LWGTEEVAAWLEHLSLCEYKDIFT 32 (81)
T ss_dssp GCCHHHHHHHHHHTTCGGGHHHHH
T ss_pred hCCHHHHHHHHHHCCCHHHHHHHH
Confidence 457899999999999999987654
No 72
>3vlf_B 26S protease regulatory subunit 7 homolog; heat repeat, chaperone, chaperone-protein binding complex; HET: DNA; 3.80A {Saccharomyces cerevisiae} PDB: 4a3v_B*
Probab=54.79 E-value=13 Score=25.34 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCC
Q psy13186 52 IHLISSEANDICNEQQKKTINAEHVLQALDQLGFG 86 (170)
Q Consensus 52 I~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~ 86 (170)
|.-|..+|.-.|-+.++..|+.+|+..|++.+-.+
T Consensus 40 l~~l~~eAa~~a~r~~~~~i~~~df~~Al~~v~~~ 74 (88)
T 3vlf_B 40 LRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISG 74 (88)
T ss_dssp HHHHHHHHHHHHHHHSCSSBCHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHhcC
Confidence 44444556666777788999999999999987554
No 73
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=54.05 E-value=45 Score=25.95 Aligned_cols=65 Identities=11% Similarity=0.180 Sum_probs=40.6
Q ss_pred cCcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 17 ILPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
.+|...+..++...+. ++.++.++...|...+.--+..+-......+.. ..+|+.+||..++...
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~i~~~~l~~l~~~~~G~~r~~~~~l~~~~~~--~~~i~~~~v~~~~~~~ 226 (319)
T 2chq_A 160 PVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAI--GEVVDADTIYQITATA 226 (319)
T ss_dssp CCCHHHHHHHHHHHHHTTCCCBCHHHHHHHHHTTTTCHHHHHHHHHHHHHS--SSCBCHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHc--CCCCCHHHHHHHHCCC
Confidence 3456667777776654 678999998888876543333333333333332 3479999998876543
No 74
>2krk_A 26S protease regulatory subunit 8; structural genomics, northeast structural genomics consortium (NESG), target HR3102A, PSI-2; NMR {Homo sapiens}
Probab=52.47 E-value=15 Score=25.14 Aligned_cols=31 Identities=13% Similarity=0.177 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 53 HLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 53 ~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
.-|..+|.-.|-..++.+|+.+|+..|++..
T Consensus 51 ~~l~~eAa~~alr~~~~~I~~~df~~Al~~v 81 (86)
T 2krk_A 51 KGVCTEAGMYALRERRVHVTQEDFEMAVAKV 81 (86)
T ss_dssp HHHHHHHHHHHHHTTCSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 3355667777888889999999999999764
No 75
>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A
Probab=51.83 E-value=16 Score=30.80 Aligned_cols=33 Identities=9% Similarity=-0.134 Sum_probs=18.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13186 117 GIPEEELLRQQQELFAKAREEQAAADLSQWQHI 149 (170)
Q Consensus 117 g~~eEel~~~Q~eLF~~Ar~~~~~~~~~~~~~~ 149 (170)
.++.++.+..=.+-...+-......++|+|++.
T Consensus 354 ~~~~eeal~~~~~~~~~i~~~~~~~~~~~~~~~ 386 (449)
T 3iot_A 354 RQTVDAALAAAQTNAAAMATLEKLMKAFESLKS 386 (449)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 357777666555555555544444555555543
No 76
>3fes_A ATP-dependent CLP endopeptidase; alpha-helical bundles, structural genomics, PSI-2, protein S initiative; HET: PG4 EPE; 1.82A {Clostridium difficile}
Probab=51.77 E-value=20 Score=26.06 Aligned_cols=40 Identities=25% Similarity=0.374 Sum_probs=32.2
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 33 NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 33 ~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
++.+|..++.+|.. |...|..-+...|+++|++-||=.-+
T Consensus 79 ~~~~s~~~~~vl~~------------A~~~A~~~~~~~v~~eHlLlAll~~~ 118 (145)
T 3fes_A 79 DIVLSPRSKQILEL------------SGMFANKLKTNYIGTEHILLAIIQEG 118 (145)
T ss_dssp CCEECHHHHHHHHH------------HHHHHHHTTCSSBCHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHH------------HHHHHHHcCCCcccHHHHHHHHHhCC
Confidence 35688888888855 66678888999999999999986554
No 77
>1k6k_A ATP-dependent CLP protease ATP-binding subunit CLPA; chaperone, ATPase, adaptor binding, X-RAY, structure, N-domain, hydrolase; 1.80A {Escherichia coli} SCOP: a.174.1.1 PDB: 1r6c_X 1r6o_A* 1r6q_A* 1mg9_B* 1lzw_B* 1mbx_A* 1mbv_A 1mbu_A*
Probab=50.52 E-value=48 Score=23.48 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=29.3
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 34 IRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 34 ~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
+.+|..+..+|.. |...+..-+...|+++|++-||=.-
T Consensus 78 ~~~s~~~~~~l~~------------A~~~A~~~~~~~i~~ehLLlall~~ 115 (143)
T 1k6k_A 78 TQPTLSFQRVLQR------------AVFHVQSSGRNEVTGANVLVAIFSE 115 (143)
T ss_dssp CEECHHHHHHHHH------------HHHHHHSSSCSCBCHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHH------------HHHHHHHcCCCccCHHHHHHHHHhC
Confidence 3567777766644 6777888889999999999998653
No 78
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=49.93 E-value=51 Score=21.54 Aligned_cols=71 Identities=23% Similarity=0.288 Sum_probs=47.0
Q ss_pred CcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHH---------HHHHHHHhhCCCCccchhhHHHHHhhc---CC
Q psy13186 18 LPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLIS---------SEANDICNEQQKKTINAEHVLQALDQL---GF 85 (170)
Q Consensus 18 LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~ls---------seAnei~~~~~RKTIs~edVl~AL~~L---gF 85 (170)
++...|.++++..-++-.|+- .+|+.+++ ..+......++.-+|+.+++..+|..+ |.
T Consensus 6 ~s~~ei~~~~~~~d~~g~i~~----------~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~ 75 (109)
T 5pal_A 6 LKADDINKAISAFKDPGTFDY----------KRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR 75 (109)
T ss_dssp SCHHHHHHHHHHTCSTTCCCH----------HHHHHHHTCTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred CCHHHHHHHHHHhCCCCcCcH----------HHHHHHHhhccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCC
Confidence 667788888887654334432 23444432 345566677888899999999999998 76
Q ss_pred CccHHHHHHHHHH
Q psy13186 86 GDYKSEAEEVMKD 98 (170)
Q Consensus 86 ~~yi~~l~~~l~~ 98 (170)
.---..+...+..
T Consensus 76 ~~~~~~~~~~~~~ 88 (109)
T 5pal_A 76 DLNDTETKALLAA 88 (109)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 6555555555543
No 79
>3zri_A CLPB protein, CLPV; chaperone, HSP100 proteins, AAA+ proteins, T6SS, secretion,; 1.80A {Vibrio cholerae} PDB: 3zrj_A
Probab=49.85 E-value=13 Score=28.60 Aligned_cols=38 Identities=24% Similarity=0.361 Sum_probs=30.1
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
+++..++.+|.. |...|...+...|.++|++.||=.-+
T Consensus 24 kfT~~a~~aL~~------------A~~~A~~~~h~~I~~EHLLlaLL~~~ 61 (171)
T 3zri_A 24 KLNAQSKLALEQ------------AASLCIERQHPEVTLEHYLDVLLDNP 61 (171)
T ss_dssp HBCHHHHHHHHH------------HHHHHHHHTCSEECHHHHHHHHTTCT
T ss_pred HcCHHHHHHHHH------------HHHHHHHcCCCcccHHHHHHHHHHcc
Confidence 467777777754 67779999999999999999986543
No 80
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=48.35 E-value=30 Score=27.39 Aligned_cols=69 Identities=14% Similarity=0.194 Sum_probs=45.9
Q ss_pred CcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHH---HHHHHHHHHHhhCCCCccchhhHHHHHhhcCCC
Q psy13186 18 LPRASINKIIKEILP--NIRVANESRELVMNCCMEFIH---LISSEANDICNEQQKKTINAEHVLQALDQLGFG 86 (170)
Q Consensus 18 LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~---~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~ 86 (170)
+|..-+..+++..+. ++.++.++...|...+.-.+. -+...+...|...+..+|+.+||-.++..++..
T Consensus 168 ~~~~e~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G~~r~l~~~l~~~~~~a~~~~~~~i~~~~~~~~~~~~~~~ 241 (324)
T 1hqc_A 168 YTPEELAQGVMRDARLLGVRITEEAALEIGRRSRGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLD 241 (324)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHSCSCHHHHHHHHHHHTTTSTTTSCSCCCHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhccc
Confidence 455566677766654 578999998888877522222 223334444555567889999999999887654
No 81
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=48.31 E-value=23 Score=28.55 Aligned_cols=67 Identities=15% Similarity=0.145 Sum_probs=42.1
Q ss_pred cCcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 17 ILPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
.++...+..+++..+. ++.++.++...|.+.+.--+..+.......+.. +..+|+.+||..++....
T Consensus 177 ~l~~~~~~~~l~~~~~~~~~~~~~~a~~~l~~~~~G~~r~~~~~l~~~~~~-~~~~i~~~~v~~~~~~~~ 245 (373)
T 1jr3_A 177 ALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIAS-GDGQVSTQAVSAMLGTLD 245 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHSSSCHHHHHHHHHHHHHH-TTTCBCHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHh-cCCcccHHHHHHHhCCCC
Confidence 3556677777776664 678899998888876544333333333332222 245799999887776543
No 82
>3fh2_A Probable ATP-dependent protease (heat shock prote; struct genomics, PSI2, MCSG, protein structure initiative; 1.60A {Corynebacterium glutamicum}
Probab=48.28 E-value=27 Score=25.27 Aligned_cols=39 Identities=18% Similarity=0.150 Sum_probs=31.7
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 34 IRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 34 ~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
+.+|..+..+|.. |...|..-+...|+++|++-||=.-+
T Consensus 80 ~~~s~~~~~vL~~------------A~~~a~~~~~~~i~~eHlLlall~~~ 118 (146)
T 3fh2_A 80 IPFTPRAKKVLEL------------SLREGLQMGHKYIGTEFLLLGLIREG 118 (146)
T ss_dssp CCBCHHHHHHHHH------------HHHHHHHTTCSSBCHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHH------------HHHHHHHcCCCcCcHHHHHHHHHhCC
Confidence 5688888888866 56668888999999999999986543
No 83
>1uxc_A FRUR (1-57), fructose repressor; DNA-binding protein, LACI family, transc regulation; NMR {Escherichia coli} SCOP: a.35.1.5 PDB: 1uxd_A
Probab=47.82 E-value=27 Score=22.74 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=24.7
Q ss_pred ccCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHH
Q psy13186 16 LILPRASINKIIKEILPNIRVANESRELVMNCCMEF 51 (170)
Q Consensus 16 l~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eF 51 (170)
..++.+||.+++...--...||.+++.-|.+.+.++
T Consensus 10 aGVS~sTVSrvLng~~~~~~vs~et~~rI~~aa~~l 45 (65)
T 1uxc_A 10 AGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREH 45 (65)
T ss_dssp HTSCHHHHHHHHHTCTTTTTCTTHHHHHHHHHHHHH
T ss_pred HCcCHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHh
Confidence 467788999988863102368888888877766543
No 84
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=46.99 E-value=24 Score=28.40 Aligned_cols=68 Identities=12% Similarity=0.182 Sum_probs=47.2
Q ss_pred cHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHH---HHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCCC
Q psy13186 19 PRASINKIIKEILP--NIRVANESRELVMNCCME---FIHLISSEANDICNEQQKKTINAEHVLQALDQLGFG 86 (170)
Q Consensus 19 P~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~e---FI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF~ 86 (170)
+...+..+++..+. ++.++.++...|.+.+.- .+.-+...+...|...+..+|+.+||-.++..+++.
T Consensus 185 ~~~e~~~il~~~~~~~~~~~~~~~~~~l~~~~~G~~r~l~~~l~~~~~~a~~~~~~~i~~~~~~~~~~~~~~~ 257 (338)
T 3pfi_A 185 KDSELALILQKAALKLNKTCEEKAALEIAKRSRSTPRIALRLLKRVRDFADVNDEEIITEKRANEALNSLGVN 257 (338)
T ss_dssp CHHHHHHHHHHHHHHTTCEECHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHhCCc
Confidence 35556666666554 577899998888875322 223333445567777888899999999999988765
No 85
>1ixs_A Holliday junction DNA helicase RUVA; heterodimeric protein complex, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.20A {Thermus thermophilus} SCOP: a.5.1.1
Probab=46.65 E-value=30 Score=22.65 Aligned_cols=39 Identities=31% Similarity=0.497 Sum_probs=24.2
Q ss_pred hhHHHHHhhcCCCccHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCHHHHHHH
Q psy13186 74 EHVLQALDQLGFGDYKSEAEEVMKDCKIVAANRKKQSNRLENLGIPEEELLRQ 126 (170)
Q Consensus 74 edVl~AL~~LgF~~yi~~l~~~l~~~Ke~~k~r~~k~~k~~~~g~~eEel~~~ 126 (170)
+|++.||..|||.. .++..++.... + ...+.+.|+++|.
T Consensus 18 ~ea~~AL~aLGY~~--~ea~kav~~v~---~---------~~~~~~~e~lIr~ 56 (62)
T 1ixs_A 18 EEAVMALAALGFKE--AQARAVVLDLL---A---------QNPKARAQDLIKE 56 (62)
T ss_dssp HHHHHHHHHTTCCH--HHHHHHHHHHH---H---------HCTTCCHHHHHHH
T ss_pred HHHHHHHHHcCCCH--HHHHHHHHHHH---h---------cCCCCCHHHHHHH
Confidence 68999999999984 23333332210 0 0235788998874
No 86
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=46.53 E-value=17 Score=27.04 Aligned_cols=59 Identities=7% Similarity=0.171 Sum_probs=34.8
Q ss_pred HHHHHHHHhhCC--CCcccHHHHHHHHHHHH----HHHHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 21 ASINKIIKEILP--NIRVANESRELVMNCCM----EFIHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 21 AtV~riiKe~LP--~~~iSkdA~e~i~~c~~----eFI~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
..+..++...+. ++.++.++.+.|.+.+. ..++.|.. +...|...+ ++|+.+||..+|.
T Consensus 177 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~r~l~~~l~~-~~~~a~~~~-~~It~~~v~~~l~ 241 (242)
T 3bos_A 177 DEKLAALQRRAAMRGLQLPEDVGRFLLNRMARDLRTLFDVLDR-LDKASMVHQ-RKLTIPFVKEMLR 241 (242)
T ss_dssp GGHHHHHHHHHHHTTCCCCHHHHHHHHHHTTTCHHHHHHHHHH-HHHHHHHHT-CCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHccCCHHHHHHHHHH-HHHHHHHhC-CCCcHHHHHHHhh
Confidence 344455555443 56788888887777643 33343332 333343333 5699999988875
No 87
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=46.22 E-value=59 Score=21.19 Aligned_cols=38 Identities=8% Similarity=-0.018 Sum_probs=27.5
Q ss_pred HHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHH
Q psy13186 58 EANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEV 95 (170)
Q Consensus 58 eAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~ 95 (170)
.+......++.-+|+.+++..+|..+|+.-=-..+...
T Consensus 28 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l 65 (105)
T 1wlz_A 28 QEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRL 65 (105)
T ss_dssp HHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHH
Confidence 35556667788899999999999999986333344443
No 88
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=45.70 E-value=30 Score=26.71 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=38.5
Q ss_pred HHHHHHHHhhCCCCcccHHH-HHHHHHHH----HHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCC
Q psy13186 21 ASINKIIKEILPNIRVANES-RELVMNCC----MEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGF 85 (170)
Q Consensus 21 AtV~riiKe~LP~~~iSkdA-~e~i~~c~----~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF 85 (170)
.....|++..+....++.++ ...+.... .--|..+...|...|...++.+|+.+||..|++..-.
T Consensus 185 ~~r~~il~~~~~~~~l~~~~~~~~la~~~~G~~~~dl~~l~~~a~~~a~~~~~~~i~~~~~~~a~~~~~~ 254 (257)
T 1lv7_A 185 RGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMM 254 (257)
T ss_dssp HHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHhc
Confidence 34445565554434444433 23333321 1123445556777788888999999999999987643
No 89
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=44.92 E-value=99 Score=25.03 Aligned_cols=67 Identities=9% Similarity=0.092 Sum_probs=48.7
Q ss_pred CcHHHHHHHHHhhC----CCCcccHHHHHHHHHHHH---------HHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 18 LPRASINKIIKEIL----PNIRVANESRELVMNCCM---------EFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 18 LP~AtV~riiKe~L----P~~~iSkdA~e~i~~c~~---------eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
|+..-+..+++..+ ++..++.++...|.+.|. -++..+...|...+...++.+|+.+||..++..+.
T Consensus 215 l~~~e~~~ll~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~G~p~~~~~l~~~a~~~a~~~~~~~i~~~~v~~~~~~~~ 294 (412)
T 1w5s_A 215 YKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSENE 294 (412)
T ss_dssp CCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHh
Confidence 44556677775443 334588888888887776 25666777777888888899999999998887764
No 90
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=44.62 E-value=72 Score=21.74 Aligned_cols=38 Identities=13% Similarity=0.215 Sum_probs=26.8
Q ss_pred HHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 59 ANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 59 Anei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
+......++.-+|+.+++..+|..+|..--...+...+
T Consensus 101 ~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~ 138 (161)
T 3fwb_A 101 AFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMI 138 (161)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 34455567777899999999999998764444555444
No 91
>1bh9_A TAFII18; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_A*
Probab=44.43 E-value=54 Score=20.26 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=30.1
Q ss_pred HHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13186 23 INKIIKEILPNIRVANESRELVMNCCMEFIHLISSEAND 61 (170)
Q Consensus 23 V~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAne 61 (170)
|..+|---...-.-..|+..+|-+..++||.-+..+|.+
T Consensus 6 i~~mMy~fGD~~~P~~ETv~llEeiV~~~i~~l~~~A~~ 44 (45)
T 1bh9_A 6 LRCMMYGFGDDQNPYTESVDILEDLVIEFITEMTHKAMS 44 (45)
T ss_dssp HHHHHHHTTSCSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455555444334567899999999999999999998875
No 92
>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A*
Probab=44.12 E-value=24 Score=28.70 Aligned_cols=67 Identities=9% Similarity=0.155 Sum_probs=39.6
Q ss_pred cCcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 17 ILPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
.++...+.+.|+..+- ++.|+.++..+|.+.+.-=+..+.++-...+.-.+.++|+.+||...+...
T Consensus 141 ~l~~~~l~~~l~~~~~~~g~~i~~~a~~~l~~~~~gdl~~~~~elekl~l~~~~~~It~e~V~~~~~~~ 209 (343)
T 1jr3_D 141 TPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDA 209 (343)
T ss_dssp CCCTTHHHHHHHHHHHHTTCEECHHHHHHHHHSSTTCHHHHHHHHHHHHHHCTTCEECHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHhhh
Confidence 3455556666666654 688999999998877543223333333333332234578888876655443
No 93
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=43.52 E-value=7 Score=25.71 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=18.8
Q ss_pred cchhhHHHHHhhcCCCccHHHH
Q psy13186 71 INAEHVLQALDQLGFGDYKSEA 92 (170)
Q Consensus 71 Is~edVl~AL~~LgF~~yi~~l 92 (170)
=+++||..-|..+||+.|++..
T Consensus 7 Ws~~~V~~WL~~~gl~~y~~~F 28 (74)
T 2gle_A 7 WSVQQVSHWLVGLSLDQYVSEF 28 (74)
T ss_dssp CCSGGGHHHHHHTTTHHHHHHH
T ss_pred CCHHHHHHHHHHCCCHHHHHHH
Confidence 4789999999999999887654
No 94
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=43.18 E-value=51 Score=25.75 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=39.1
Q ss_pred CcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 18 LPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 18 LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
++...+..+++..+. ++.++.++.+.|.+.+.--+..+-......+. ...+|+.+||..++...
T Consensus 169 l~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~g~~r~~~~~l~~~~~--~~~~i~~~~v~~~~~~~ 234 (327)
T 1iqp_A 169 LRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAA--LDKKITDENVFMVASRA 234 (327)
T ss_dssp CCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTTCHHHHHHHHHHHHT--TCSEECHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHCCC
Confidence 556667777776653 67899999888887754333222222222221 23479999998776543
No 95
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=42.95 E-value=9.2 Score=27.28 Aligned_cols=23 Identities=13% Similarity=0.063 Sum_probs=20.2
Q ss_pred ccchhhHHHHHhhcCCCccHHHH
Q psy13186 70 TINAEHVLQALDQLGFGDYKSEA 92 (170)
Q Consensus 70 TIs~edVl~AL~~LgF~~yi~~l 92 (170)
.-+++||..-|..+||++|++..
T Consensus 19 ~Ws~edV~~WL~~~Gl~~Y~~~F 41 (97)
T 2d8c_A 19 YWSPKKVADWLLENAMPEYCEPL 41 (97)
T ss_dssp SCCTTHHHHHHHHTTCTTTTTTT
T ss_pred hCCHHHHHHHHHHcCCHHHHHHH
Confidence 45899999999999999998665
No 96
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=42.80 E-value=17 Score=25.31 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=20.8
Q ss_pred ccchhhHHHHHhhc-CCCccHHHHHH
Q psy13186 70 TINAEHVLQALDQL-GFGDYKSEAEE 94 (170)
Q Consensus 70 TIs~edVl~AL~~L-gF~~yi~~l~~ 94 (170)
.=+++||..-|..+ ||++|++....
T Consensus 16 ~Ws~edV~~wL~~l~gl~~y~~~F~~ 41 (89)
T 1kw4_A 16 SWSVDDVSNFIRELPGCQDYVDDFIQ 41 (89)
T ss_dssp GCCHHHHHHHHHTSTTCGGGHHHHHH
T ss_pred hCCHHHHHHHHHHCcChHHHHHHHHH
Confidence 46899999999999 99998876543
No 97
>2y1q_A CLPC N-domain, negative regulator of genetic competence CLPC/MEC; transcription, proteolysis; 1.50A {Bacillus subtilis} PDB: 2y1r_A* 2k77_A
Probab=40.91 E-value=38 Score=24.23 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=29.0
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 34 IRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 34 ~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
..+|..+..+|.. |...|..-+...|+++|++-||=.-
T Consensus 78 ~~~s~~~~~vL~~------------A~~~A~~~~~~~i~~ehlLlall~~ 115 (150)
T 2y1q_A 78 IHYTPRAKKVIEL------------SMDEARKLGHSYVGTEHILLGLIRE 115 (150)
T ss_dssp CEECHHHHHHHHH------------HHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHH------------HHHHHHHcCCCeecHHHHHHHHHhC
Confidence 4577777766644 6667777788999999999998653
No 98
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=40.54 E-value=27 Score=27.22 Aligned_cols=33 Identities=12% Similarity=0.210 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 51 FIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 51 FI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
-|..|...|...|...++.+|+.+||..|+..+
T Consensus 226 ~i~~l~~~a~~~a~~~~~~~I~~~d~~~al~~~ 258 (285)
T 3h4m_A 226 ELKAICTEAGMNAIRELRDYVTMDDFRKAVEKI 258 (285)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCcCCHHHHHHHHHHH
Confidence 455677778888888999999999999998764
No 99
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=37.41 E-value=1.8e+02 Score=24.12 Aligned_cols=68 Identities=7% Similarity=0.044 Sum_probs=43.4
Q ss_pred cHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHH----HHHHHHHHHHHHHhhC------------CCCccchhhHHHHH
Q psy13186 19 PRASINKIIKEILP--NIRVANESRELVMNCCME----FIHLISSEANDICNEQ------------QKKTINAEHVLQAL 80 (170)
Q Consensus 19 P~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~e----FI~~lsseAnei~~~~------------~RKTIs~edVl~AL 80 (170)
+......|++..+. +..++.+....|.+.+.- -|..|...|.-.+.++ ....|+.+|+..||
T Consensus 283 ~~~~r~~il~~~~~~~~~~l~~~~~~~la~~~~g~~~~~l~~L~~~a~~~~~rel~~~~~~~~~~~~~~~i~~~d~~~al 362 (389)
T 3vfd_A 283 NEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESL 362 (389)
T ss_dssp CHHHHHHHHHHHHTTSCCCSCHHHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHTSCCC---CCSSSCCCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhhhhhhhccchhhcCCcCHHHHHHHH
Confidence 34455666666654 466788777777765433 3445555555444443 45689999999999
Q ss_pred hhcCCC
Q psy13186 81 DQLGFG 86 (170)
Q Consensus 81 ~~LgF~ 86 (170)
....-.
T Consensus 363 ~~~~~s 368 (389)
T 3vfd_A 363 KKIKRS 368 (389)
T ss_dssp HHCCCS
T ss_pred HHcCCC
Confidence 876544
No 100
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=36.04 E-value=22 Score=28.37 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=42.6
Q ss_pred cCcHHHHHHHHHhhC--CCCcccHHHHHHHHHHH----HHHHHHHHHHHHHHHhhCC-CCccchhhHHHHHhhcC
Q psy13186 17 ILPRASINKIIKEIL--PNIRVANESRELVMNCC----MEFIHLISSEANDICNEQQ-KKTINAEHVLQALDQLG 84 (170)
Q Consensus 17 ~LP~AtV~riiKe~L--P~~~iSkdA~e~i~~c~----~eFI~~lsseAnei~~~~~-RKTIs~edVl~AL~~Lg 84 (170)
.++...+..+++..+ .++.++.++...|.+.+ ...++.+-..+. .+...+ +++|+++||..++..+.
T Consensus 191 ~~~~~~~~~~l~~~~~~~~~~i~~~~l~~l~~~~~G~~r~~~~~l~~~~~-~~~~~~~~~~It~~~v~~~~~~~~ 264 (353)
T 1sxj_D 191 ALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASK-GAQYLGDGKNITSTQVEELAGVVP 264 (353)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSCHHHHHHHHHHTHH-HHHHHCSCCCCCHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHH-hcCCCccCccccHHHHHHHhCCCC
Confidence 455666677777655 36789999988888764 344444433222 233333 33899999998887543
No 101
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=35.77 E-value=60 Score=28.20 Aligned_cols=39 Identities=21% Similarity=0.290 Sum_probs=31.4
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCC
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGF 85 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF 85 (170)
++|..++.+|.. |...|...+...|.++|++.||=.-+=
T Consensus 5 ~ft~~a~~al~~------------A~~~A~~~~h~~v~~eHLLlaLl~~~~ 43 (468)
T 3pxg_A 5 RFTERAQKVLAL------------AQEEALRLGHNNIGTEHILLGLVREGE 43 (468)
T ss_dssp CBCHHHHHHHHH------------HHHHHHHTTCSEECHHHHHHHHHHSCC
T ss_pred hhCHHHHHHHHH------------HHHHHHHcCCCcccHHHHHHHHHhccC
Confidence 577778777744 777899999999999999999866543
No 102
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=35.74 E-value=83 Score=24.34 Aligned_cols=52 Identities=12% Similarity=0.162 Sum_probs=32.8
Q ss_pred CcccHHHHHHHHHHHH------------HHHHHHHHH----HHHHHhhCCCC-ccchhhHHHHHhhcCC
Q psy13186 34 IRVANESRELVMNCCM------------EFIHLISSE----ANDICNEQQKK-TINAEHVLQALDQLGF 85 (170)
Q Consensus 34 ~~iSkdA~e~i~~c~~------------eFI~~lsse----Anei~~~~~RK-TIs~edVl~AL~~LgF 85 (170)
+.++.++.+.|.+.+. ...+.|-.. +...+...++. +|+.+||-.|+..+..
T Consensus 233 ~~~~~~a~~~l~~~~~~~~~~~~~g~~R~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~~~l~~~~~ 301 (310)
T 1ofh_A 233 IAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVE 301 (310)
T ss_dssp EEECHHHHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHSHHHHHHGGGCTTCEEEECHHHHHHHTCSSSS
T ss_pred eccCHHHHHHHHHHhhhhcccccccCcHHHHHHHHHHHHhhhcCCccccCCEEEEeeHHHHHHHHhhhh
Confidence 5789999998888763 222332221 22333334433 6999999999987654
No 103
>1yfs_A Alanyl-tRNA synthetase; alpha-beta fold, helix-loop-helix motif, amino acid binding, ligase; 2.08A {Aquifex aeolicus} SCOP: a.203.1.1 d.104.1.1 PDB: 1yfr_A* 1riq_A 1yft_A 1ygb_A 3htz_A
Probab=35.28 E-value=2e+02 Score=26.09 Aligned_cols=72 Identities=25% Similarity=0.387 Sum_probs=41.7
Q ss_pred HHHHHHHHhhCCCCcccHH-HHHHHHHHHHHHHHHHHHH------HHHHHhhCCCCccchhhHHHHHhhcCCC-ccHHHH
Q psy13186 21 ASINKIIKEILPNIRVANE-SRELVMNCCMEFIHLISSE------ANDICNEQQKKTINAEHVLQALDQLGFG-DYKSEA 92 (170)
Q Consensus 21 AtV~riiKe~LP~~~iSkd-A~e~i~~c~~eFI~~lsse------Anei~~~~~RKTIs~edVl~AL~~LgF~-~yi~~l 92 (170)
.+|...|+...|.+.-..+ ...+|..--.-|..-|..- +...+.+.++++|+++++.+--+..||+ +.+.++
T Consensus 322 ~~v~~~m~~~yPel~~~~~~I~~vi~~EE~~F~~TL~~G~~~l~~~~~~~~~~~~~~l~G~~af~LyDTyGfP~dLt~ei 401 (465)
T 1yfs_A 322 DLVVDIMKEPYPELELSREFVKGIVKGEEKRFIKTLKAGMEYIQEVIQKALEEGRKTLSGKEVFTAYDTYGFPVDLIDEI 401 (465)
T ss_dssp HHHHHHHTTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEECHHHHHHHHHTSCCCHHHHHHH
T ss_pred HHHHHHHhccCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCHHHHHhhhhccCCCHHHHHHH
Confidence 3566677777776543333 2333333333344333321 1122334467789999999999999999 555444
No 104
>3zri_A CLPB protein, CLPV; chaperone, HSP100 proteins, AAA+ proteins, T6SS, secretion,; 1.80A {Vibrio cholerae} PDB: 3zrj_A
Probab=35.08 E-value=49 Score=25.27 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=31.6
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCCccchhhHHHHHhhc
Q psy13186 34 IRVANESRELVMNCCMEFIHLISSEANDICN-EQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 34 ~~iSkdA~e~i~~c~~eFI~~lsseAnei~~-~~~RKTIs~edVl~AL~~L 83 (170)
+.+|..+..+|.+ |...|. .-|...|+++|++-||=.-
T Consensus 97 ~~~S~~l~~vL~~------------A~~~A~l~~gd~~I~teHLLLALl~~ 135 (171)
T 3zri_A 97 PAFSPLLVELLQE------------AWLLSSTELEQAELRSGAIFLAALTR 135 (171)
T ss_dssp CEECHHHHHHHHH------------HHHHHHTTTCCSSBCHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHH------------HHHHHHHHcCCCEEcHHHHHHHHHhC
Confidence 5688998888866 677788 8899999999999998543
No 105
>2ns0_A Hypothetical protein; rhodococcus structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP} SCOP: a.4.5.76
Probab=35.02 E-value=71 Score=22.56 Aligned_cols=37 Identities=11% Similarity=0.131 Sum_probs=28.3
Q ss_pred HHHhh-CCCCccchhhHHHHHhhcCCCccHHHHHHHHH
Q psy13186 61 DICNE-QQKKTINAEHVLQALDQLGFGDYKSEAEEVMK 97 (170)
Q Consensus 61 ei~~~-~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~ 97 (170)
..+.. ..-|||.|.+|-.||..=++-.+.+++..+.-
T Consensus 14 ~ll~~R~~~kTicPSEvARal~~~~Wr~lM~~vR~~A~ 51 (85)
T 2ns0_A 14 ALLDARADSASICPSDVARAVAPDDWRPLMEPVREAAG 51 (85)
T ss_dssp HHHHHSCTTCCBCHHHHHHHHCTTSCGGGHHHHHHHHH
T ss_pred HHHHHhCCCCCcCHHHHHHHhCchhHHHHhHHHHHHHH
Confidence 33433 34499999999999987778888888887654
No 106
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=34.97 E-value=81 Score=25.53 Aligned_cols=66 Identities=9% Similarity=0.223 Sum_probs=38.5
Q ss_pred cCcHHHHHHHHHhhC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh---hCCCCccchhhHHHHHhh
Q psy13186 17 ILPRASINKIIKEIL--PNIRVANESRELVMNCCMEFIHLISSEANDICN---EQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 17 ~LP~AtV~riiKe~L--P~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~---~~~RKTIs~edVl~AL~~ 82 (170)
.+|...+.+.+...+ .++.++.++...|...+.-=+..+-......+. ..++.+|+.++|..++..
T Consensus 168 ~l~~~~~~~~l~~~~~~~~~~i~~~~~~~i~~~s~G~~r~~~~~l~~~~~~~~~~~~~~it~~~v~~~~~~ 238 (340)
T 1sxj_C 168 PLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGA 238 (340)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTTCHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCcccccccHHHHHHHhCC
Confidence 466777777777666 367888888877776543211111111111121 223457999999887654
No 107
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=34.68 E-value=75 Score=22.10 Aligned_cols=58 Identities=16% Similarity=0.265 Sum_probs=36.8
Q ss_pred HHHHHHhhCCCCccchhhHHHHHhhcCC-CccHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCHHHHHHH
Q psy13186 58 EANDICNEQQKKTINAEHVLQALDQLGF-GDYKSEAEEVMKDCKIVAANRKKQSNRLENLGIPEEELLRQ 126 (170)
Q Consensus 58 eAnei~~~~~RKTIs~edVl~AL~~LgF-~~yi~~l~~~l~~~Ke~~k~r~~k~~k~~~~g~~eEel~~~ 126 (170)
.+......++.-+|+.+++..+|..+|+ .-=...+...+..+- .. .+-.++-+|.++.
T Consensus 44 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D---~d--------~dG~I~~~EF~~~ 102 (135)
T 3h4s_E 44 KGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGD---LD--------GDGALNQTEFCVL 102 (135)
T ss_dssp HHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHC---SS--------CSSSBCHHHHHHH
T ss_pred HHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhC---CC--------CCCCCcHHHHHHH
Confidence 3555567788889999999999999997 333344444443221 00 1223788887763
No 108
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=34.62 E-value=1.1e+02 Score=20.87 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=25.5
Q ss_pred HHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 59 ANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 59 Anei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
+-.....++.-+|+.+++..+|..+|..-=-..+...+
T Consensus 90 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~ 127 (153)
T 2ovk_B 90 AFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVW 127 (153)
T ss_dssp HHHTTCSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 44445557777899999999999988653334444443
No 109
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=34.44 E-value=33 Score=26.47 Aligned_cols=59 Identities=14% Similarity=0.185 Sum_probs=32.7
Q ss_pred HHHHHHhhCCCCcccHHH-HHHHHHHHHHH----HHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 23 INKIIKEILPNIRVANES-RELVMNCCMEF----IHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 23 V~riiKe~LP~~~iSkdA-~e~i~~c~~eF----I~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
-.+|++..+.+..++.++ ...|...+.-| |.-+..+|...|...++.+|+.+|+..|++
T Consensus 191 r~~il~~~~~~~~~~~~~~~~~la~~~~G~~~~dl~~~~~~a~~~a~~~~~~~I~~~dl~~a~~ 254 (254)
T 1ixz_A 191 REQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAAS 254 (254)
T ss_dssp HHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCCcccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCcCHHHHHHHhC
Confidence 344555444344444443 33344332222 223334556667777888999999998863
No 110
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=34.33 E-value=70 Score=18.58 Aligned_cols=37 Identities=0% Similarity=-0.047 Sum_probs=26.0
Q ss_pred HHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 60 NDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 60 nei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
-.....++.-+|+.+++..+|..+|..---..+...+
T Consensus 7 F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~ 43 (67)
T 1tiz_A 7 FEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFF 43 (67)
T ss_dssp HHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHH
T ss_pred HHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 3445566777899999999999998764444444444
No 111
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=33.63 E-value=98 Score=20.06 Aligned_cols=71 Identities=15% Similarity=0.234 Sum_probs=43.2
Q ss_pred cCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHH---------HHHHHHHhhCCCCccchhhHHHHHhhc---C
Q psy13186 17 ILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLIS---------SEANDICNEQQKKTINAEHVLQALDQL---G 84 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~ls---------seAnei~~~~~RKTIs~edVl~AL~~L---g 84 (170)
.++..-|.++++..-.+-.|+- .+|+.++. ..+......++.-+|+.+++..+|..+ |
T Consensus 6 ~~t~~e~~~~~~~~d~~g~i~~----------~ef~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g 75 (110)
T 1pva_A 6 LLKADDIKKALDAVKAEGSFNH----------KKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADG 75 (110)
T ss_dssp HSCHHHHHHHHHHTCSTTCCCH----------HHHHHHHTCTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTC
T ss_pred cCCHHHHHHHHHhcCCCCcCcH----------HHHHHHHccCcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcC
Confidence 3556677788776533333432 23333332 345566667888899999999999999 5
Q ss_pred CCccHHHHHHHHH
Q psy13186 85 FGDYKSEAEEVMK 97 (170)
Q Consensus 85 F~~yi~~l~~~l~ 97 (170)
..--...+...+.
T Consensus 76 ~~~~~~~~~~~~~ 88 (110)
T 1pva_A 76 RDLTDAETKAFLK 88 (110)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 5433344444443
No 112
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=33.36 E-value=99 Score=20.05 Aligned_cols=71 Identities=14% Similarity=0.163 Sum_probs=45.0
Q ss_pred cCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHH---------HHHHHHHhhCCCCccchhhHHHHHhhc---C
Q psy13186 17 ILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLIS---------SEANDICNEQQKKTINAEHVLQALDQL---G 84 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~ls---------seAnei~~~~~RKTIs~edVl~AL~~L---g 84 (170)
.++..-|.+|++..-++-.|+-+ +|+.++. ..+-.....++.-+|+.+++..+|..+ |
T Consensus 6 ~~~~~e~~~~~~~~d~~g~i~~~----------eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g 75 (109)
T 1bu3_A 6 ILADADVAAALKACEAADSFNYK----------AFFAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGA 75 (109)
T ss_dssp SSCHHHHHHHHHHTCSTTCCCHH----------HHHHHHTGGGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTC
T ss_pred cCCHHHHHHHHHHhCCCCcCcHH----------HHHHHHHcChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccC
Confidence 46677888888876444444432 3333332 245555667788899999999999999 5
Q ss_pred CCccHHHHHHHHH
Q psy13186 85 FGDYKSEAEEVMK 97 (170)
Q Consensus 85 F~~yi~~l~~~l~ 97 (170)
..---..+...+.
T Consensus 76 ~~~~~~~~~~~~~ 88 (109)
T 1bu3_A 76 RALTDAETKAFLK 88 (109)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 5433445554443
No 113
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=32.12 E-value=1.3e+02 Score=20.86 Aligned_cols=42 Identities=19% Similarity=0.229 Sum_probs=32.3
Q ss_pred HHHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHHHH
Q psy13186 57 SEANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVMKD 98 (170)
Q Consensus 57 seAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~~ 98 (170)
..|-...-.++.-+|+.+++..+|..+|..---..+...+..
T Consensus 86 ~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~ 127 (148)
T 2lmt_A 86 REAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIRE 127 (148)
T ss_dssp HHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHH
Confidence 345666777888899999999999999987666666665543
No 114
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=31.63 E-value=1.4e+02 Score=21.28 Aligned_cols=36 Identities=6% Similarity=0.186 Sum_probs=26.0
Q ss_pred HHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 59 ANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 59 Anei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
+-.....++.-+|+.+++..+|..+|+.. ..+...+
T Consensus 44 ~F~~~D~d~~G~i~~~El~~~l~~~g~~~--~~~~~~~ 79 (180)
T 3mse_B 44 LFYKLDTNHNGSLSHREIYTVLASVGIKK--WDINRIL 79 (180)
T ss_dssp HHHHHCTTCSSSEEHHHHHHHHHHTTCCH--HHHHHHH
T ss_pred HHHHhCCCCCCcCCHHHHHHHHHHcCCCH--HHHHHHH
Confidence 44445567778999999999999999873 4444443
No 115
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=31.56 E-value=1.1e+02 Score=20.23 Aligned_cols=41 Identities=17% Similarity=0.295 Sum_probs=28.8
Q ss_pred HHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHHHHH
Q psy13186 59 ANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVMKDC 99 (170)
Q Consensus 59 Anei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~~~ 99 (170)
+-.....++.-+|+.+++..+|..+|..-=-..+...+..+
T Consensus 89 ~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~ 129 (147)
T 4ds7_A 89 AFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV 129 (147)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 44455567788999999999999998654445555555443
No 116
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=31.11 E-value=95 Score=24.24 Aligned_cols=60 Identities=7% Similarity=0.049 Sum_probs=35.5
Q ss_pred CcccHHHHHHHHHHHHHH----HHHHHHHHHHHHhhC------------CCCccchhhHHHHHhhcCCCccHHHHH
Q psy13186 34 IRVANESRELVMNCCMEF----IHLISSEANDICNEQ------------QKKTINAEHVLQALDQLGFGDYKSEAE 93 (170)
Q Consensus 34 ~~iSkdA~e~i~~c~~eF----I~~lsseAnei~~~~------------~RKTIs~edVl~AL~~LgF~~yi~~l~ 93 (170)
..++.++...|.+.+.-| |..|...|.-.+.++ ...+|+.+|+..|+..+.-.-.-..+.
T Consensus 207 ~~~~~~~~~~la~~~~g~~~~~l~~l~~~a~~~a~r~~~~~~~~~~~~~~~~~i~~~d~~~a~~~~~~s~~~~~~~ 282 (297)
T 3b9p_A 207 SPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLN 282 (297)
T ss_dssp CCSCHHHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHTCC--------CCCCCCCCHHHHHHHTTSCCCSSCHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhhhhcccccccccCCcCHHHHHHHHHHcCCCCCHHHHH
Confidence 446677666666554332 233444444444433 236899999999999887654443333
No 117
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=30.87 E-value=60 Score=25.27 Aligned_cols=66 Identities=14% Similarity=0.210 Sum_probs=40.7
Q ss_pred cCcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 17 ILPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
.++...+..+++..+. ++.++.++...|.+.|.--+..+-......+.. .+.|+.+||..++....
T Consensus 165 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G~~r~a~~~l~~~~~~--~~~i~~~~v~~~~~~~~ 232 (323)
T 1sxj_B 165 KLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAG--HGLVNADNVFKIVDSPH 232 (323)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHH--HSSBCHHHHHHHHTSCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CCCcCHHHHHHHHCCCC
Confidence 3456667777776654 678999998888877653332222222222221 24799999988886553
No 118
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=30.21 E-value=51 Score=29.01 Aligned_cols=31 Identities=19% Similarity=0.115 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 52 IHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 52 I~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
|.-|..+|.-.|-+.+|..|+.+|+..|+..
T Consensus 383 i~~l~~eA~~~a~r~~~~~i~~~d~~~A~~~ 413 (428)
T 4b4t_K 383 IAAIMQEAGLRAVRKNRYVILQSDLEEAYAT 413 (428)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Confidence 5666777888888899999999999999864
No 119
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=30.03 E-value=45 Score=29.54 Aligned_cols=31 Identities=19% Similarity=0.340 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 52 IHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 52 I~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
|..|..+|.-.|.+.++..|+.+|+..|++.
T Consensus 391 i~~l~~eA~~~air~~~~~i~~~d~~~Al~~ 421 (437)
T 4b4t_L 391 IRNCATEAGFFAIRDDRDHINPDDLMKAVRK 421 (437)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 4556667777888899999999999999875
No 120
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=29.12 E-value=72 Score=25.01 Aligned_cols=66 Identities=14% Similarity=0.191 Sum_probs=35.9
Q ss_pred ccCcH-HHHHHHHHhhCCCCcccHHH-HHHHHHHHHHH----HHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 16 LILPR-ASINKIIKEILPNIRVANES-RELVMNCCMEF----IHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 16 l~LP~-AtV~riiKe~LP~~~iSkdA-~e~i~~c~~eF----I~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
+.+|. .....|++..+.+..++.++ ...|...+.-| |.-+...|...|...++.+|+.+||..|++
T Consensus 207 i~~p~~~~r~~il~~~~~~~~~~~~~~~~~la~~~~G~~~~dl~~l~~~a~~~a~~~~~~~I~~~dl~~a~~ 278 (278)
T 1iy2_A 207 IDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAAS 278 (278)
T ss_dssp CCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCCSBCHHHHHHHTC
T ss_pred eCCcCHHHHHHHHHHHHccCCCCcccCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCcCHHHHHHHhC
Confidence 34442 33445555444444444443 33343332211 233344566667777888999999998863
No 121
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=28.90 E-value=1.4e+02 Score=20.41 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=28.3
Q ss_pred HHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHHH
Q psy13186 58 EANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVMK 97 (170)
Q Consensus 58 eAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~ 97 (170)
.|-.....++.-+|+.+++..+|..+|..-=-..+...+.
T Consensus 89 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~ 128 (159)
T 2ovk_C 89 EAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFT 128 (159)
T ss_dssp HHHHHTCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHH
T ss_pred HHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 3556666778889999999999999986533444554443
No 122
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.72 E-value=27 Score=24.60 Aligned_cols=23 Identities=26% Similarity=0.297 Sum_probs=18.8
Q ss_pred ccchhhHHHHHhhcCCCc--cHHHH
Q psy13186 70 TINAEHVLQALDQLGFGD--YKSEA 92 (170)
Q Consensus 70 TIs~edVl~AL~~LgF~~--yi~~l 92 (170)
.=+++||..-|..+||++ |++..
T Consensus 29 ~Ws~~~V~~WL~~lgl~~~~y~~~F 53 (103)
T 2e8o_A 29 TWGPEQVCSFLRRGGFEEPVLLKNI 53 (103)
T ss_dssp GCHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred hCCHHHHHHHHHHcCCChHHHHHHH
Confidence 357899999999999997 66544
No 123
>1wwi_A Hypothetical protein TTHA1479; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.58A {Thermus thermophilus HB8} SCOP: a.22.1.4 PDB: 1wws_A
Probab=28.44 E-value=1.4e+02 Score=23.03 Aligned_cols=58 Identities=9% Similarity=0.094 Sum_probs=44.8
Q ss_pred CcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhH
Q psy13186 18 LPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHV 76 (170)
Q Consensus 18 LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edV 76 (170)
+|-+-+.|+.+.+. +.-|.|+-..-+.+.+..=+.-|.--|...|..+||-+|.+-|+
T Consensus 3 m~~~~~e~lFR~aa-~LdvdK~d~~r~~d~V~~Kl~DLl~va~~~Ak~n~RdvI~~~DL 60 (148)
T 1wwi_A 3 MKVAEFERLFRQAA-GLDVDKNDLKRVSDFLRNKLYDLLAVAERNAKYNGRDLIFEPDL 60 (148)
T ss_dssp SCHHHHHHHHHHHH-CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECGGGS
T ss_pred CCHHHHHHHHHHHh-ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccccC
Confidence 46667899999987 44444655555667777777777788899999999999999885
No 124
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=28.16 E-value=96 Score=19.11 Aligned_cols=39 Identities=21% Similarity=0.341 Sum_probs=27.4
Q ss_pred HHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHHH
Q psy13186 59 ANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVMK 97 (170)
Q Consensus 59 Anei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~ 97 (170)
+-.....++.-+|+.+++..+|..+|+.-=...+...+.
T Consensus 19 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 57 (85)
T 2ktg_A 19 AFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVK 57 (85)
T ss_dssp HHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHH
T ss_pred HHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 344455677778999999999999997644444554443
No 125
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=27.98 E-value=1.7e+02 Score=21.21 Aligned_cols=47 Identities=13% Similarity=0.154 Sum_probs=29.8
Q ss_pred HHHHHHHHH------------HHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 49 MEFIHLISS------------EANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 49 ~eFI~~lss------------eAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
.+|+.++.. .+......++.-+|+.+++..+| .+|..---..+...+
T Consensus 109 ~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~ 167 (196)
T 3dtp_E 109 TMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQAL 167 (196)
T ss_dssp HHHHHHHHHCCCSSCCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHH
Confidence 567766653 34444555777789999999999 888653333444433
No 126
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=27.40 E-value=1.3e+02 Score=19.42 Aligned_cols=69 Identities=14% Similarity=0.210 Sum_probs=41.4
Q ss_pred CcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHH---------HHHHHHHhhCCCCccchhhHHHHHhhc---CC
Q psy13186 18 LPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLIS---------SEANDICNEQQKKTINAEHVLQALDQL---GF 85 (170)
Q Consensus 18 LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~ls---------seAnei~~~~~RKTIs~edVl~AL~~L---gF 85 (170)
++..-|.++++..=.+-.|+- .+|+.++. ..+-.....++.-+|+.+++..+|..+ |.
T Consensus 6 ~t~~e~~~~~~~~d~~g~i~~----------~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~ 75 (109)
T 1rwy_A 6 LSAEDIKKAIGAFTAADSFDH----------KKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR 75 (109)
T ss_dssp SCHHHHHHHHHTTCSTTCCCH----------HHHHHHHTGGGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred CCHHHHHHHHHHcCCCCcEeH----------HHHHHHHhcCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCC
Confidence 556677777776533334443 23333221 345555667788899999999999999 54
Q ss_pred CccHHHHHHHH
Q psy13186 86 GDYKSEAEEVM 96 (170)
Q Consensus 86 ~~yi~~l~~~l 96 (170)
.--...+...+
T Consensus 76 ~~~~~~~~~~~ 86 (109)
T 1rwy_A 76 DLSAKETKTLM 86 (109)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 43334444444
No 127
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=27.30 E-value=28 Score=20.96 Aligned_cols=18 Identities=11% Similarity=0.324 Sum_probs=15.8
Q ss_pred CccchhhHHHHHhhcCCC
Q psy13186 69 KTINAEHVLQALDQLGFG 86 (170)
Q Consensus 69 KTIs~edVl~AL~~LgF~ 86 (170)
.++++++|+.++..+||.
T Consensus 48 ~~~~~~~i~~~i~~~Gy~ 65 (69)
T 4a4j_A 48 GETTPQILTDAVERAGYH 65 (69)
T ss_dssp TTCCHHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHHcCCc
Confidence 467889999999999996
No 128
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.95 E-value=54 Score=29.32 Aligned_cols=68 Identities=16% Similarity=0.176 Sum_probs=41.9
Q ss_pred cccCcHH-HHHHHHHhhCCCCcccHHH-HHHHHHHH----HHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 15 ELILPRA-SINKIIKEILPNIRVANES-RELVMNCC----MEFIHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 15 dl~LP~A-tV~riiKe~LP~~~iSkdA-~e~i~~c~----~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
.+.+|-. .-..|++-.+.++.++.|. .+.|.+.+ --=|.-|..+|.-.|-++++..|+.+|+..|++.
T Consensus 349 ~v~lPd~~~R~~Il~~~l~~~~l~~dvdl~~LA~~T~GfSGADI~~l~~eA~~~Air~~~~~It~eDf~~Al~r 422 (437)
T 4b4t_I 349 LFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKER 422 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHTTSCBCSCCCHHHHHHHCCSCCHHHHHHHHHHHHHHHHHTTCSCBCHHHHHHHHHH
T ss_pred EcCCcCHHHHHHHHHHHhcCCCCCCcCCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCccCHHHHHHHHHH
Confidence 3456643 3344555444445454432 23333332 2235666677888888899999999999999874
No 129
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=26.89 E-value=30 Score=22.72 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=19.1
Q ss_pred cchhhHHHHHhhc--CCCccHHHHH
Q psy13186 71 INAEHVLQALDQL--GFGDYKSEAE 93 (170)
Q Consensus 71 Is~edVl~AL~~L--gF~~yi~~l~ 93 (170)
=|++||..-|..+ ||+.|.+...
T Consensus 6 Wt~~~V~~WL~~~~~gl~~y~~~F~ 30 (78)
T 3bs7_A 6 WTVSDVLKWYRRHCGEYTQYEQLFA 30 (78)
T ss_dssp CCHHHHHHHHHHHSGGGGGGHHHHH
T ss_pred CCHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3789999999997 9998887654
No 130
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=26.74 E-value=87 Score=18.84 Aligned_cols=36 Identities=25% Similarity=0.351 Sum_probs=24.5
Q ss_pred HHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHH
Q psy13186 60 NDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEV 95 (170)
Q Consensus 60 nei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~ 95 (170)
-.....++.-+|+.+++..+|..+|+.-=-..+...
T Consensus 13 F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~ 48 (77)
T 2joj_A 13 FDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILEL 48 (77)
T ss_dssp HHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHH
Confidence 344456677789999999999999876333333333
No 131
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=26.68 E-value=1.1e+02 Score=20.45 Aligned_cols=82 Identities=15% Similarity=0.237 Sum_probs=45.5
Q ss_pred ccccCcHHHHHHHHHhhCCCCcccHHHHHHHHH------HHHHHHHHHHH------------HHHHHHhhCCCCccchhh
Q psy13186 14 DELILPRASINKIIKEILPNIRVANESRELVMN------CCMEFIHLISS------------EANDICNEQQKKTINAEH 75 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP~~~iSkdA~e~i~~------c~~eFI~~lss------------eAnei~~~~~RKTIs~ed 75 (170)
.+-.|+..-+..+++... ..++.+....+.. .-.+|+.++.. .+-.....++.-+|+.++
T Consensus 20 ~~G~i~~~el~~~l~~~g--~~~~~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E 97 (143)
T 3j04_B 20 RDGFIDKEDLHDMLASMG--KNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDH 97 (143)
T ss_dssp CTTCCCHHHHHHHHHHTS--CCCCHHHHHTTTTTSSSCCCHHHHHHHHHHTTTSSCCHHHHHHHHTTSCSSSCCCCCTTT
T ss_pred CCCCcCHHHHHHHHHHhC--CCCCHHHHHHHHHhCCCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHHCCCCCCeEcHHH
Confidence 344566666777766543 2223222211111 13456665553 233334456777899999
Q ss_pred HHHHHhhcCCCccHHHHHHHHH
Q psy13186 76 VLQALDQLGFGDYKSEAEEVMK 97 (170)
Q Consensus 76 Vl~AL~~LgF~~yi~~l~~~l~ 97 (170)
+..+|..+|..-=-..+...+.
T Consensus 98 l~~~l~~~g~~~~~~~~~~~~~ 119 (143)
T 3j04_B 98 LRELLTTMGDRFTDEEVDEMYR 119 (143)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHHHH
Confidence 9999999987644444544443
No 132
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.47 E-value=48 Score=29.30 Aligned_cols=32 Identities=13% Similarity=0.334 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 52 IHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 52 I~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
|..|..+|.-.|.+.++..|+.+|+..||+..
T Consensus 391 i~~l~~eA~~~a~r~~~~~i~~~Df~~Al~~v 422 (434)
T 4b4t_M 391 LKAVTVEAGMIALRNGQSSVKHEDFVEGISEV 422 (434)
T ss_dssp HHHHHHHHHHHHHHHTCSSBCHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHH
Confidence 55566677778888899999999999999864
No 133
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=26.41 E-value=1.3e+02 Score=19.34 Aligned_cols=70 Identities=11% Similarity=0.152 Sum_probs=44.6
Q ss_pred CcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHH---------HHHHHHHHhhCCCCccchhhHHHHHhhc---CC
Q psy13186 18 LPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLI---------SSEANDICNEQQKKTINAEHVLQALDQL---GF 85 (170)
Q Consensus 18 LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~l---------sseAnei~~~~~RKTIs~edVl~AL~~L---gF 85 (170)
++...|..|++..-++-.|+-+ +|+.++ ...+......++.-+|+.+++..+|..+ |.
T Consensus 6 ~~~~e~~~l~~~~d~~g~i~~~----------eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~ 75 (108)
T 2pvb_A 6 LKDADVAAALAACSAADSFKHK----------EFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSAR 75 (108)
T ss_dssp SCHHHHHHHHHHTCSTTCCCHH----------HHHHHHTGGGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSC
T ss_pred CCHHHHHHHHHHhCCCCcCcHH----------HHHHHHhCChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCC
Confidence 5677888888876444345432 333332 1345566667788899999999999999 55
Q ss_pred CccHHHHHHHHH
Q psy13186 86 GDYKSEAEEVMK 97 (170)
Q Consensus 86 ~~yi~~l~~~l~ 97 (170)
.-=...+...+.
T Consensus 76 ~~~~~~~~~~~~ 87 (108)
T 2pvb_A 76 ALTDAETKAFLA 87 (108)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 433344444443
No 134
>3vlv_A ALGQ1; sugar binding protein, alginate; HET: MAW LGU; 1.50A {Sphingomonas SP} SCOP: c.94.1.1 PDB: 3vlu_A* 3vlw_A* 1y3n_A* 1y3p_A* 1y3q_A 1j1n_A* 1kwh_A
Probab=26.38 E-value=1.4e+02 Score=25.39 Aligned_cols=71 Identities=13% Similarity=0.036 Sum_probs=41.7
Q ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcc--chhhHHHHHhhcCCCccHHHHHHHHHHHHHHH
Q psy13186 31 LPNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTI--NAEHVLQALDQLGFGDYKSEAEEVMKDCKIVA 103 (170)
Q Consensus 31 LP~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTI--s~edVl~AL~~LgF~~yi~~l~~~l~~~Ke~~ 103 (170)
+|.+.++.+-.+-+....+..-.++......+-. |+..+ .-+..++-|+.+|++.++....+.+++|+...
T Consensus 421 ~p~~~~~~~e~~~~~~~~~~l~~~~~e~~~~~i~--G~~d~d~~~d~~v~~l~~~G~d~~~~~~q~~~d~~~~~~ 493 (502)
T 3vlv_A 421 FTGVNLTVEEREIYDKYWPDVKTYMFEMGQSWVM--GTKDPEKTWNDYQQQLKNRGFYQVMIVMQKAYDRQYGGA 493 (502)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--TSSCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHC---
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCchhhHHHHHHHHHHHCChHHHHHHHHHHHHHHHhhc
Confidence 4677777664433333333333333333333332 23333 24567889999999999999999999886544
No 135
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=26.11 E-value=1.3e+02 Score=18.94 Aligned_cols=38 Identities=18% Similarity=0.279 Sum_probs=26.8
Q ss_pred HHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 59 ANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 59 Anei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
+......++.-.|+.+++..+|..+|+.-=-..+...+
T Consensus 25 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~ 62 (90)
T 1avs_A 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAII 62 (90)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 34445567777899999999999999864344444444
No 136
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=25.93 E-value=1.3e+02 Score=19.46 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=26.5
Q ss_pred HHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 60 NDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 60 nei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
......++.-+|+.+++..+|..+|+.-=-..+...+
T Consensus 35 F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~ 71 (94)
T 2kz2_A 35 FRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 71 (94)
T ss_dssp HHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 3445667778999999999999999764334444444
No 137
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=25.80 E-value=1.6e+02 Score=21.06 Aligned_cols=39 Identities=15% Similarity=0.243 Sum_probs=27.8
Q ss_pred HHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 58 EANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 58 eAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
.|....-.++.-+|+.+++..+|..+|..==-.++...+
T Consensus 89 ~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~ 127 (159)
T 3i5g_C 89 EAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIF 127 (159)
T ss_dssp HHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 356666677888899999999999998764344454444
No 138
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=25.54 E-value=1e+02 Score=28.20 Aligned_cols=38 Identities=21% Similarity=0.332 Sum_probs=30.8
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
++|..++.+|.. |...|...+...|.++|++.||=.-+
T Consensus 5 ~~t~~a~~~l~~------------A~~~A~~~~h~~i~~eHlLlaLl~~~ 42 (758)
T 3pxi_A 5 RFTERAQKVLAL------------AQEEALRLGHNNIGTEHILLGLVREG 42 (758)
T ss_dssp CBCHHHHHHHHH------------HHHHHHHTTCSEECHHHHHHHHHHSC
T ss_pred hhCHHHHHHHHH------------HHHHHHHcCCCcccHHHHHHHHHhcc
Confidence 577788877744 67779999999999999999986554
No 139
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=25.52 E-value=2.1e+02 Score=21.42 Aligned_cols=71 Identities=17% Similarity=0.197 Sum_probs=44.9
Q ss_pred cCcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHH-----HHHHHHHhhCCCCccchhhHHHHHhhcCCCccH
Q psy13186 17 ILPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLIS-----SEANDICNEQQKKTINAEHVLQALDQLGFGDYK 89 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~ls-----seAnei~~~~~RKTIs~edVl~AL~~LgF~~yi 89 (170)
.++...+.++++..-. +-.|+-+ +|+.++. ..+......++.-+|+.+++..+|..+|..-=-
T Consensus 83 ~~~~~~~~~l~~~~D~d~dg~I~~~----------EF~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~ 152 (220)
T 3sjs_A 83 RLSPQTALRMMRIFDTDFNGHISFY----------EFMAMYKFMELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQ 152 (220)
T ss_dssp CCCHHHHHHHHHHHCTTCSSCBCHH----------HHHHHHHHHHHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCH
T ss_pred CCCHHHHHHHHHHhCCCCCCcCCHH----------HHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCH
Confidence 4566667777766543 3344432 3333332 345566667888899999999999999986444
Q ss_pred HHHHHHHH
Q psy13186 90 SEAEEVMK 97 (170)
Q Consensus 90 ~~l~~~l~ 97 (170)
..+...+.
T Consensus 153 ~~~~~l~~ 160 (220)
T 3sjs_A 153 RTSLLLHR 160 (220)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44555443
No 140
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=25.45 E-value=1.3e+02 Score=26.16 Aligned_cols=66 Identities=12% Similarity=0.292 Sum_probs=43.5
Q ss_pred CcHHHHHHHHHhhCC---------CCcccHHHHHHHHHHH----HHHHHHHHHHHHHHHhhC--CCCccchhhHHHHHhh
Q psy13186 18 LPRASINKIIKEILP---------NIRVANESRELVMNCC----MEFIHLISSEANDICNEQ--QKKTINAEHVLQALDQ 82 (170)
Q Consensus 18 LP~AtV~riiKe~LP---------~~~iSkdA~e~i~~c~----~eFI~~lsseAnei~~~~--~RKTIs~edVl~AL~~ 82 (170)
+|...+..+++..+. ++.++.++.+.|.+.+ ...++.|-. +...|... ++.+|+.+||-.++..
T Consensus 165 l~~edi~~il~~~l~~~~~~~~~~~~~i~~~al~~L~~~~~Gd~R~lln~Le~-a~~~a~~~~~~~~~It~e~v~~~l~~ 243 (447)
T 3pvs_A 165 LSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEM-MADMAEVDDSGKRVLKPELLTEIAGE 243 (447)
T ss_dssp CCHHHHHHHHHHHHHCTTTSSTTSSEECCHHHHHHHHHHHCSCHHHHHHHHHH-HHHHSCBCTTSCEECCHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHHHhhhhccccCcCCHHHHHHHHHHCCCCHHHHHHHHHH-HHHhcccccCCCCccCHHHHHHHHhh
Confidence 455666666666542 3679999999988874 344444433 33334322 6689999999999987
Q ss_pred cC
Q psy13186 83 LG 84 (170)
Q Consensus 83 Lg 84 (170)
..
T Consensus 244 ~~ 245 (447)
T 3pvs_A 244 RS 245 (447)
T ss_dssp CC
T ss_pred hh
Confidence 64
No 141
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.35 E-value=61 Score=28.55 Aligned_cols=31 Identities=13% Similarity=0.185 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhCCCCccchhhHHHHHhh
Q psy13186 52 IHLISSEANDICNEQQKKTINAEHVLQALDQ 82 (170)
Q Consensus 52 I~~lsseAnei~~~~~RKTIs~edVl~AL~~ 82 (170)
|.-|..+|.-.|-++++..|+.+|+..|++.
T Consensus 358 i~~l~~eA~~~Air~~~~~vt~~Df~~Al~~ 388 (405)
T 4b4t_J 358 VKGVCTEAGMYALRERRIHVTQEDFELAVGK 388 (405)
T ss_dssp HHHHHHHHHHHHHHTTCSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCHHHHHHHHHH
Confidence 5566677888888899999999999999864
No 142
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=24.79 E-value=1.3e+02 Score=18.58 Aligned_cols=38 Identities=18% Similarity=0.297 Sum_probs=26.9
Q ss_pred HHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHHH
Q psy13186 60 NDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVMK 97 (170)
Q Consensus 60 nei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~ 97 (170)
......++.-+|+.+++..+|..+|+.-=-..+...+.
T Consensus 29 F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~ 66 (87)
T 1s6j_A 29 FKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMD 66 (87)
T ss_dssp HHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHH
T ss_pred HHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 34455677788999999999999997644444544443
No 143
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=24.72 E-value=64 Score=30.23 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=29.9
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
++|..++.+|.. |...|...+...|+++|++.||=.-
T Consensus 5 ~~t~~a~~al~~------------A~~~A~~~~h~~i~~eHLLlaLl~~ 41 (854)
T 1qvr_A 5 RWTQAAREALAQ------------AQVLAQRMKHQAIDLPHLWAVLLKD 41 (854)
T ss_dssp CSCHHHHHHHHH------------HHHHHHHTTCSEECHHHHHHHHCCS
T ss_pred hhCHHHHHHHHH------------HHHHHHHcCCCCccHHHHHHHHHhC
Confidence 567777777744 7778999999999999999998543
No 144
>1z4h_A TORI, TOR inhibition protein; winged helix, reverse turn, protein binding, DNA binding protein; NMR {Escherichia coli}
Probab=24.66 E-value=35 Score=21.75 Aligned_cols=26 Identities=19% Similarity=0.148 Sum_probs=19.8
Q ss_pred ccccCcHHHHHHHHHhh-CC-CCcccHH
Q psy13186 14 DELILPRASINKIIKEI-LP-NIRVANE 39 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~-LP-~~~iSkd 39 (170)
+-+.+.++||+++|+.- +| .+++++-
T Consensus 18 ~~lgvsrstiy~~~~~g~fP~piklG~~ 45 (66)
T 1z4h_A 18 ADTGFGKTFIYDRIKSGDLPKAKVIHGR 45 (66)
T ss_dssp HHHSSCHHHHHHHHHHHHCCCSEESSSC
T ss_pred HHHCcCHHHHHHHHHCCCCCCCEEeCCC
Confidence 34689999999999875 68 4766643
No 145
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=24.58 E-value=1.8e+02 Score=20.30 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=28.7
Q ss_pred HHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHHH
Q psy13186 58 EANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVMK 97 (170)
Q Consensus 58 eAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l~ 97 (170)
.+-.....++.-+|+.+++..+|..+|+.-=...+...+.
T Consensus 81 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 120 (173)
T 1alv_A 81 AIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIR 120 (173)
T ss_dssp HHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 3555566678889999999999999997643344444443
No 146
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=24.54 E-value=37 Score=20.80 Aligned_cols=17 Identities=18% Similarity=0.264 Sum_probs=15.3
Q ss_pred ccchhhHHHHHhhcCCC
Q psy13186 70 TINAEHVLQALDQLGFG 86 (170)
Q Consensus 70 TIs~edVl~AL~~LgF~ 86 (170)
+++++.|+.+++++||.
T Consensus 45 ~~~~~~i~~~i~~~Gy~ 61 (68)
T 3iwl_A 45 EHSMDTLLATLKKTGKT 61 (68)
T ss_dssp SSCHHHHHHHHHTTCSC
T ss_pred cCCHHHHHHHHHHcCCc
Confidence 46899999999999997
No 147
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=24.39 E-value=1.3e+02 Score=18.61 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=24.2
Q ss_pred HHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 60 NDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 60 nei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
-.....++.-+|+.+++..+|..+| .--...+...+
T Consensus 17 F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~ 52 (86)
T 2opo_A 17 FKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMM 52 (86)
T ss_dssp HHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHH
T ss_pred HHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHH
Confidence 3445567777899999999999998 43333444443
No 148
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=24.19 E-value=2.1e+02 Score=20.91 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=48.1
Q ss_pred ccccCcHHHHHHHHHhhCC----CCcccHHH-HHHHHHH---------HHHHHHHHH-----HHHHHHHhhCCCCccchh
Q psy13186 14 DELILPRASINKIIKEILP----NIRVANES-RELVMNC---------CMEFIHLIS-----SEANDICNEQQKKTINAE 74 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP----~~~iSkdA-~e~i~~c---------~~eFI~~ls-----seAnei~~~~~RKTIs~e 74 (170)
.+-.|...-+..+++..+| +..++.+. ..++... -.+|+.+++ ..|-.... ++.-+|+.+
T Consensus 17 ~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~~G~I~~~ 95 (174)
T 2i7a_A 17 RGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQ-TSPGVLLSS 95 (174)
T ss_dssp -CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHHHHHHHHHHHHC-SBTTBEEGG
T ss_pred CCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhc-CCCCcCCHH
Confidence 3445555556666665432 23344432 2233222 346665544 35677777 888899999
Q ss_pred hHHHHHhhc----CCCccHHHHHHHHH
Q psy13186 75 HVLQALDQL----GFGDYKSEAEEVMK 97 (170)
Q Consensus 75 dVl~AL~~L----gF~~yi~~l~~~l~ 97 (170)
++..+|..+ |+.-=-+.+...+.
T Consensus 96 El~~~l~~l~~~~G~~~~~~~~~~l~~ 122 (174)
T 2i7a_A 96 DLWKAIENTDFLRGIFISRELLHLVTL 122 (174)
T ss_dssp GHHHHHHTCGGGTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhHhccCCCCCHHHHHHHHH
Confidence 999999999 98633344444443
No 149
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=24.01 E-value=1.4e+02 Score=18.69 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=23.3
Q ss_pred HHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 61 DICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 61 ei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
.....++.-+|+.+++..+|..+|+.-=...+...+
T Consensus 16 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~ 51 (92)
T 2kn2_A 16 KVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMI 51 (92)
T ss_dssp HHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred HHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 344556667888888888888888653334444433
No 150
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.00 E-value=54 Score=29.58 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 52 IHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 52 I~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
|.-|..+|.-.|.+.+++.|+.+|+..|++..
T Consensus 419 I~~l~~eAa~~Air~~~~~it~~Df~~Al~kV 450 (467)
T 4b4t_H 419 LRSVCTEAGMFAIRARRKVATEKDFLKAVDKV 450 (467)
T ss_dssp HHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccCHHHHHHHHHHH
Confidence 55566777778888899999999999998753
No 151
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=23.58 E-value=2.1e+02 Score=21.28 Aligned_cols=54 Identities=13% Similarity=0.135 Sum_probs=37.8
Q ss_pred ccCcHHHHHHHHHhhC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcCC
Q psy13186 16 LILPRASINKIIKEIL--PNIRVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALDQLGF 85 (170)
Q Consensus 16 l~LP~AtV~riiKe~L--P~~~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~LgF 85 (170)
..+..++..|++|+.- ++-+|+.--.++| | ... ..+.++|+.++.+.||..|--
T Consensus 40 ~~M~~k~f~K~~kD~~lidgk~iT~TdvDIi------F---------~Kv-~k~~r~I~f~qF~~aL~~lA~ 95 (125)
T 1pul_A 40 TEMTGKNFDKWLKDAGVLDNKAITGTMTGIA------F---------SKV-TGPKKKATFDETKKVLAFVAE 95 (125)
T ss_dssp SCCCHHHHHHHHHHHTSCCSSSSCHHHHHHH------H---------HHH-TCSSSCCCHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHCCCCCCCCCCcccccee------e---------hcc-cCCcceecHHHHHHHHHHHHH
Confidence 4688899999999874 2366776666655 2 123 445677999999988887543
No 152
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=23.35 E-value=1.6e+02 Score=19.04 Aligned_cols=71 Identities=13% Similarity=0.129 Sum_probs=45.6
Q ss_pred cCcHHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHH---------HHHHHHHHhhCCCCccchhhHHHHHhhc---C
Q psy13186 17 ILPRASINKIIKEILPNIRVANESRELVMNCCMEFIHLI---------SSEANDICNEQQKKTINAEHVLQALDQL---G 84 (170)
Q Consensus 17 ~LP~AtV~riiKe~LP~~~iSkdA~e~i~~c~~eFI~~l---------sseAnei~~~~~RKTIs~edVl~AL~~L---g 84 (170)
.++..-|.++++..=++-.|+- .+|+.++ ...+......++.-+|+.+++..+|..+ |
T Consensus 6 ~~~~~ei~~~~~~~D~~g~i~~----------~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~ 75 (109)
T 3fs7_A 6 ILSAKDIESALSSCQAADSFNY----------KSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSA 75 (109)
T ss_dssp TSCHHHHHHHHHHTCSTTCCCH----------HHHHHHHTCTTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTS
T ss_pred cCCHHHHHHHHHhcCCCCcCcH----------HHHHHHHhcCCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhccc
Confidence 4667788888887643334443 2344443 2345556667788899999999999999 5
Q ss_pred CCccHHHHHHHHH
Q psy13186 85 FGDYKSEAEEVMK 97 (170)
Q Consensus 85 F~~yi~~l~~~l~ 97 (170)
..---..+...+.
T Consensus 76 ~~~~~~~~~~~~~ 88 (109)
T 3fs7_A 76 RVLTSAETKAFLA 88 (109)
T ss_dssp CCCCHHHHHHHHH
T ss_pred ccCCHHHHHHHHH
Confidence 5544455555443
No 153
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=23.20 E-value=1e+02 Score=19.17 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=22.3
Q ss_pred HHHhhCCCCccchhhHHHHHhhcCCCccHHH
Q psy13186 61 DICNEQQKKTINAEHVLQALDQLGFGDYKSE 91 (170)
Q Consensus 61 ei~~~~~RKTIs~edVl~AL~~LgF~~yi~~ 91 (170)
.....++.-+|+.+++..+|..+|+.-=-..
T Consensus 21 ~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~ 51 (86)
T 1j7q_A 21 DIFDRNAENIAPVSDTMDMLTKLGQTYTKRE 51 (86)
T ss_dssp HHHSTTTTSCBCHHHHHHHHHHTSCCCSHHH
T ss_pred HHhCCCCCCcCcHHHHHHHHHHHcCCCCHHH
Confidence 3345566778999999999999997633333
No 154
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=23.04 E-value=32 Score=26.25 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHhhCCCCccchhhHHHHHhhc
Q psy13186 52 IHLISSEANDICNEQQKKTINAEHVLQALDQL 83 (170)
Q Consensus 52 I~~lsseAnei~~~~~RKTIs~edVl~AL~~L 83 (170)
|.-+...|...|...++.+|+.+||..|+...
T Consensus 218 l~~l~~~a~~~a~~~~~~~i~~~d~~~a~~~~ 249 (262)
T 2qz4_A 218 IANICNEAALHAAREGHTSVHTLNFEYAVERV 249 (262)
T ss_dssp HHHHHHHHHTC--------CCBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHh
Confidence 44455566666777788899999998888764
No 155
>1khy_A CLPB protein; alpha helix, chaperone; 1.95A {Escherichia coli} SCOP: a.174.1.1
Probab=22.85 E-value=74 Score=22.50 Aligned_cols=35 Identities=9% Similarity=0.117 Sum_probs=25.6
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 35 RVANESRELVMNCCMEFIHLISSEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 35 ~iSkdA~e~i~~c~~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~ 81 (170)
.+|..+..+|.. |...+..-+...|+++|++-||=
T Consensus 82 ~~s~~~~~vl~~------------A~~~a~~~~~~~i~~ehlLlall 116 (148)
T 1khy_A 82 QPSQDLVRVLNL------------CDKLAQKRGDNFISSELFVLAAL 116 (148)
T ss_dssp CBCHHHHHHHHH------------HHHHHHHHTCSSBCHHHHHHHHH
T ss_pred CcCHHHHHHHHH------------HHHHHHHcCCCeecHHHHHHHHH
Confidence 455665555543 56666667888999999999987
No 156
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=22.44 E-value=79 Score=21.46 Aligned_cols=38 Identities=18% Similarity=0.275 Sum_probs=28.5
Q ss_pred HHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 59 ANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 59 Anei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
|-.....++.-+|+.+++..+|..+|+.-=-.++...+
T Consensus 41 ~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~ 78 (100)
T 2lv7_A 41 AFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVII 78 (100)
T ss_dssp HHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHH
T ss_pred HHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 56667888889999999999999999863233444443
No 157
>1xdx_A Tctex1 light chain protein; chlamydomonas flagella, tctex1 dimer, solution structure, contractIle protein; NMR {Chlamydomonas reinhardtii}
Probab=22.27 E-value=1.3e+02 Score=21.34 Aligned_cols=19 Identities=26% Similarity=0.422 Sum_probs=15.9
Q ss_pred ccccCcHHHHHHHHHhhCC
Q psy13186 14 DELILPRASINKIIKEILP 32 (170)
Q Consensus 14 ddl~LP~AtV~riiKe~LP 32 (170)
++..+|...|.+||+++|-
T Consensus 9 ~~~~f~~~~v~~ii~~~l~ 27 (114)
T 1xdx_A 9 EEAAFVADDVSNIIKESID 27 (114)
T ss_dssp TCCSCCCHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHH
Confidence 5667999999999999883
No 158
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=21.91 E-value=35 Score=26.46 Aligned_cols=19 Identities=21% Similarity=0.342 Sum_probs=16.8
Q ss_pred chhhHHHHHhhcCCCccHH
Q psy13186 72 NAEHVLQALDQLGFGDYKS 90 (170)
Q Consensus 72 s~edVl~AL~~LgF~~yi~ 90 (170)
+.+.|+..|+.+||.+||.
T Consensus 108 ~~~~vle~Lk~~gl~~~Ir 126 (171)
T 2p2u_A 108 TKDMTLERLRQFGISEGIR 126 (171)
T ss_dssp CHHHHHHHHHHTTCCTTCC
T ss_pred CHHHHHHHHHHCCcHhhee
Confidence 4578999999999999986
No 159
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=21.75 E-value=35 Score=20.86 Aligned_cols=18 Identities=17% Similarity=0.521 Sum_probs=15.6
Q ss_pred CccchhhHHHHHhhcCCC
Q psy13186 69 KTINAEHVLQALDQLGFG 86 (170)
Q Consensus 69 KTIs~edVl~AL~~LgF~ 86 (170)
.++++++|..+++.+||.
T Consensus 49 ~~~~~~~i~~~i~~~Gy~ 66 (74)
T 3dxs_X 49 NLVKEEDIKEEIEDAGFE 66 (74)
T ss_dssp TTCCHHHHHHHHHHHTCE
T ss_pred CCCCHHHHHHHHHHCCCc
Confidence 346889999999999996
No 160
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=21.73 E-value=33 Score=23.58 Aligned_cols=24 Identities=29% Similarity=0.357 Sum_probs=19.2
Q ss_pred CccchhhHHHHHhhcCC--CccHHHH
Q psy13186 69 KTINAEHVLQALDQLGF--GDYKSEA 92 (170)
Q Consensus 69 KTIs~edVl~AL~~LgF--~~yi~~l 92 (170)
..=+++||..-|+.+|| +.|++..
T Consensus 18 ~~Wt~~dV~~WL~~~gl~~~~Y~~~F 43 (91)
T 1v85_A 18 DKWTTEEVVLWLEQLGPWASLYRDRF 43 (91)
T ss_dssp GGCCHHHHHHHHHHHCGGGHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 34589999999999999 7776544
No 161
>1pk1_B Sex COMB on midleg CG9495-PA; hetero SAM domain, polymers, transcriptional repression, transcription repression; 1.80A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk3_A
Probab=21.40 E-value=43 Score=23.26 Aligned_cols=24 Identities=13% Similarity=0.055 Sum_probs=19.8
Q ss_pred ccchhhHHHHHhhc--CCCccHHHHH
Q psy13186 70 TINAEHVLQALDQL--GFGDYKSEAE 93 (170)
Q Consensus 70 TIs~edVl~AL~~L--gF~~yi~~l~ 93 (170)
.=|.+||..-|+.+ ||++|.+...
T Consensus 16 ~WsvedV~~wl~~~~~g~~~y~~~F~ 41 (89)
T 1pk1_B 16 DWTIEEVIQYIESNDNSLAVHGDLFR 41 (89)
T ss_dssp GCCHHHHHHHHHHHCGGGGGGHHHHH
T ss_pred hCCHHHHHHHHHHHccchHHHHHHHH
Confidence 56899999999998 7998887554
No 162
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=21.39 E-value=76 Score=28.96 Aligned_cols=25 Identities=28% Similarity=0.288 Sum_probs=21.0
Q ss_pred HHHHHHHhhCCCCccchhhHHHHHh
Q psy13186 57 SEANDICNEQQKKTINAEHVLQALD 81 (170)
Q Consensus 57 seAnei~~~~~RKTIs~edVl~AL~ 81 (170)
..|...|...+...|+++|++.||=
T Consensus 11 ~~A~~~A~~~~h~~i~~eHLLlaLl 35 (758)
T 1r6b_X 11 NMAFARAREHRHEFMTVEHLLLALL 35 (758)
T ss_dssp HHHHHHHHHTTBSEECHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCccHHHHHHHHH
Confidence 3477788999999999999999874
No 163
>2es4_D Lipase chaperone; protein-protein complex, steric chaperone, triacylglycerol hydrolase, all alpha helix protein, A/B hydrolase fold; 1.85A {Burkholderia glumae} SCOP: a.137.15.1
Probab=21.27 E-value=3.8e+02 Score=22.78 Aligned_cols=88 Identities=16% Similarity=0.209 Sum_probs=50.1
Q ss_pred ccchhhHHHHHhhcCCCccHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Q psy13186 70 TINAEHVLQALDQLGFGDYKSEAEEVMKDCKIVAANRKKQSNRLENLGIPEEELLRQQQELF---AKAREEQAAADLSQW 146 (170)
Q Consensus 70 TIs~edVl~AL~~LgF~~yi~~l~~~l~~~Ke~~k~r~~k~~k~~~~g~~eEel~~~Q~eLF---~~Ar~~~~~~~~~~~ 146 (170)
+++++.=...|..+ +..+=+.+............. .+.-..++..|+|++++...-.++| +..|-...-++.+.|
T Consensus 202 ~Ls~~eK~~~l~~l-~~qlP~~~r~~~~~~~~~~~l-~~~~~~l~~~g~s~~~~~~~R~~~vG~EaA~RL~~Ldqqra~w 279 (332)
T 2es4_D 202 TLSPEQKAARLAAL-DAQLTPDERAQQAALHAQQDA-VTKIADLQKAGATPDQMRAQIAQTLGPEAAARAAQMQQDDEAW 279 (332)
T ss_dssp -CC--CHHHHHHHH-TTSCCHHHHHHHHHHHHHHHH-HHHHHHHHHTTCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 56666666666666 444444444433333222221 1233456679999999987777787 445666677777888
Q ss_pred HHHHHHHHHHHHh
Q psy13186 147 QHIQEITSQQKQQ 159 (170)
Q Consensus 147 ~~~~~~~~~~~~~ 159 (170)
.+--..=.++.++
T Consensus 280 q~r~~~Y~~eR~~ 292 (332)
T 2es4_D 280 QTRYQAYAAERDR 292 (332)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8766555554443
No 164
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=21.25 E-value=2e+02 Score=20.12 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=27.5
Q ss_pred HHHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 58 EANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 58 eAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
.+-.....++.-.|+.+++..+|..+|..-=...+...+
T Consensus 113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~ 151 (191)
T 1uhk_A 113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETF 151 (191)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 556666677888999999999999998653233344333
No 165
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=21.08 E-value=2.2e+02 Score=19.83 Aligned_cols=70 Identities=14% Similarity=0.184 Sum_probs=42.6
Q ss_pred CcHHHHHHHHHhhCC--CCcccHHHHHHHHHHHHHHHHHHH-----HHHHHHHhhCCCCccchhhHHHHHhhcCCCccHH
Q psy13186 18 LPRASINKIIKEILP--NIRVANESRELVMNCCMEFIHLIS-----SEANDICNEQQKKTINAEHVLQALDQLGFGDYKS 90 (170)
Q Consensus 18 LP~AtV~riiKe~LP--~~~iSkdA~e~i~~c~~eFI~~ls-----seAnei~~~~~RKTIs~edVl~AL~~LgF~~yi~ 90 (170)
++...+..+++..-+ +-.|+- .+|+.++. ..+-.....++.-+|+.+++..+|..+|..--..
T Consensus 41 ~~~~~~~~l~~~~D~~~~g~i~~----------~ef~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~ 110 (172)
T 2znd_A 41 FNPVTVRSIISMFDRENKAGVNF----------SEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQ 110 (172)
T ss_dssp CCHHHHHHHHHHHCSSSSSEECH----------HHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHH
T ss_pred CCHHHHHHHHHHhCCCCCCcCCH----------HHHHHHHHHHHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHH
Confidence 455566666665543 234443 23333322 3345556667888999999999999999764444
Q ss_pred HHHHHHH
Q psy13186 91 EAEEVMK 97 (170)
Q Consensus 91 ~l~~~l~ 97 (170)
.+...+.
T Consensus 111 ~~~~~~~ 117 (172)
T 2znd_A 111 FHDILIR 117 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 166
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=21.07 E-value=1.5e+02 Score=18.95 Aligned_cols=28 Identities=11% Similarity=0.198 Sum_probs=22.3
Q ss_pred HHHHHhhCCCCccchhhHHHHHhhcCCC
Q psy13186 59 ANDICNEQQKKTINAEHVLQALDQLGFG 86 (170)
Q Consensus 59 Anei~~~~~RKTIs~edVl~AL~~LgF~ 86 (170)
+......++.-+|+.+++..+|..+|+.
T Consensus 32 ~F~~~D~d~~G~I~~~El~~~l~~~g~~ 59 (91)
T 2pmy_A 32 VFAACDANRSGRLEREEFRALCTELRVR 59 (91)
T ss_dssp HHHHHCTTCSSSEEHHHHHHHHHHTTCC
T ss_pred HHHHHCCCCCCCCcHHHHHHHHHHcCcC
Confidence 3444566777899999999999999964
No 167
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=21.05 E-value=56 Score=21.47 Aligned_cols=24 Identities=17% Similarity=0.250 Sum_probs=19.5
Q ss_pred cchhhHHHHHhhc--CCCccHHHHHH
Q psy13186 71 INAEHVLQALDQL--GFGDYKSEAEE 94 (170)
Q Consensus 71 Is~edVl~AL~~L--gF~~yi~~l~~ 94 (170)
=++++|..-|..+ |++.|++....
T Consensus 7 Ws~~~V~~WL~~l~~gl~~Y~~~F~~ 32 (80)
T 3bs5_B 7 WSPSQVVDWMKGLDDCLQQYIKNFER 32 (80)
T ss_dssp CCHHHHHHHHHTSCGGGGGGHHHHHH
T ss_pred CCHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4789999999999 58888876654
No 168
>3f8t_A Predicted ATPase involved in replication control, CDC46/MCM family; helicase, MCM homolog, DNA replication, ATP-binding, DNA-binding; 1.90A {Methanopyrus kandleri AV19}
Probab=20.82 E-value=3.4e+02 Score=24.80 Aligned_cols=66 Identities=11% Similarity=0.095 Sum_probs=42.9
Q ss_pred cCcHHHHHHHHHhhC---CCCcccHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHhhCCCCccc
Q psy13186 17 ILPRASINKIIKEIL---PNIRVANESRELVMNCCMEFIH---------------------LISSEANDICNEQQKKTIN 72 (170)
Q Consensus 17 ~LP~AtV~riiKe~L---P~~~iSkdA~e~i~~c~~eFI~---------------------~lsseAnei~~~~~RKTIs 72 (170)
.+|...+.+.+.-+- ..+.+++++.+.|.+....-=. .|-..|.-.|.-.+|..++
T Consensus 393 ~ls~e~L~~yi~~ar~~~~~p~ls~ea~~yI~~~y~~tR~~~~~~~~~~~~~~giSpR~leaLiRlA~A~A~L~gR~~V~ 472 (506)
T 3f8t_A 393 VPSYTLLRRYLLYAIREHPAPELTEEARKRLEHWYETRREEVEERLGMGLPTLPVTRRQLESVERLAKAHARMRLSDDVE 472 (506)
T ss_dssp -CCHHHHHHHHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHHHTTCSEEC
T ss_pred CCCHHHHHHHHHHHHhcCCCceeCHHHHHHHHHHHHHHhcCcccccccccccccccHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 467777777665442 2678999998888775443211 2334455667778888888
Q ss_pred hhhHHHHHhh
Q psy13186 73 AEHVLQALDQ 82 (170)
Q Consensus 73 ~edVl~AL~~ 82 (170)
++||..|+.-
T Consensus 473 ~eDV~~Ai~L 482 (506)
T 3f8t_A 473 PEDVDIAAEL 482 (506)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877653
No 169
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=20.72 E-value=56 Score=26.90 Aligned_cols=35 Identities=14% Similarity=0.395 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHhhC---------------------CC--CccchhhHHHHHhhc
Q psy13186 49 MEFIHLISSEANDICNEQ---------------------QK--KTINAEHVLQALDQL 83 (170)
Q Consensus 49 ~eFI~~lsseAnei~~~~---------------------~R--KTIs~edVl~AL~~L 83 (170)
..|..-|+..-.++|... |. -.||++||+.|++.|
T Consensus 70 gdfy~eLavqIvEvC~~tr~~nGGli~L~el~~~~~r~Rg~~~~~IS~dDi~rAik~L 127 (234)
T 3cuq_A 70 GDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKL 127 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHTTTTCCSSCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCeeEHHHHHHHHHHhcCCccCccCHHHHHHHHHHH
Confidence 466666666666666431 11 579999999998654
No 170
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=20.38 E-value=42 Score=22.60 Aligned_cols=20 Identities=10% Similarity=0.341 Sum_probs=17.3
Q ss_pred CCCccchhhHHHHHhhcCCC
Q psy13186 67 QKKTINAEHVLQALDQLGFG 86 (170)
Q Consensus 67 ~RKTIs~edVl~AL~~LgF~ 86 (170)
.++-|+++.++..|+.+||.
T Consensus 57 ~~~gid~d~l~~~L~~~g~~ 76 (81)
T 2fi0_A 57 KLAGTPMDKIVRTLEANGYE 76 (81)
T ss_dssp HHHTCCHHHHHHHHHHTTCE
T ss_pred HHcCCCHHHHHHHHHHcCCE
Confidence 44568999999999999995
No 171
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=20.29 E-value=47 Score=21.42 Aligned_cols=17 Identities=35% Similarity=0.489 Sum_probs=14.9
Q ss_pred ccchhhHHHHHhhcCCC
Q psy13186 70 TINAEHVLQALDQLGFG 86 (170)
Q Consensus 70 TIs~edVl~AL~~LgF~ 86 (170)
.++..+|+++|+..||.
T Consensus 4 p~~~~elik~L~~~G~~ 20 (70)
T 1whz_A 4 PPRPEEVARKLRRLGFV 20 (70)
T ss_dssp CCCHHHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHCCCE
Confidence 36789999999999996
No 172
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=20.27 E-value=2e+02 Score=19.57 Aligned_cols=37 Identities=24% Similarity=0.301 Sum_probs=23.3
Q ss_pred HHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHHH
Q psy13186 60 NDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEVM 96 (170)
Q Consensus 60 nei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~l 96 (170)
-.....++.-+|+.+++..+|..+|..-=-..+...+
T Consensus 93 F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~ 129 (156)
T 1wdc_B 93 FAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTF 129 (156)
T ss_dssp HHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 3444456667888888888888887643333344433
No 173
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=20.24 E-value=1e+02 Score=25.26 Aligned_cols=37 Identities=14% Similarity=0.347 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCC------------------CccchhhHHHHHhhcC
Q psy13186 48 CMEFIHLISSEANDICNEQQK------------------KTINAEHVLQALDQLG 84 (170)
Q Consensus 48 ~~eFI~~lsseAnei~~~~~R------------------KTIs~edVl~AL~~Lg 84 (170)
...|..-|+..-.++|..... -.||++||+.|++.|.
T Consensus 88 ~gdfy~eLavqIvEvC~~tr~~nGGli~l~el~~~~~r~~~IS~dDi~rAik~L~ 142 (233)
T 1u5t_A 88 VNDFYYEVCLKVIEICRQTKDMNGGVISFQELEKVHFRKLNVGLDDLEKSIDMLK 142 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSSCEEHHHHHHTTTTTTTCCHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCeeEHHHHHHHHHhhcCCCHHHHHHHHHHhh
Confidence 478888899999999976332 3899999999998764
No 174
>2o3f_A Putative HTH-type transcriptional regulator YBBH; APC85504, putative transcriptional regulator YBBH; HET: MLY; 1.75A {Bacillus subtilis} SCOP: a.4.1.20
Probab=20.16 E-value=1.1e+02 Score=21.59 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=25.1
Q ss_pred HHHHHhhCCCCccchhhHHHHHhhcCCCccHHHHHHH
Q psy13186 59 ANDICNEQQKKTINAEHVLQALDQLGFGDYKSEAEEV 95 (170)
Q Consensus 59 Anei~~~~~RKTIs~edVl~AL~~LgF~~yi~~l~~~ 95 (170)
..++|..-+ +++.-|+.-.+.|||.+|-+--...
T Consensus 42 i~elA~~~~---vS~aTv~Rf~kklG~~gf~efk~~l 75 (111)
T 2o3f_A 42 VNEISALAN---SSDAAVIRLCXSLGLKGFQDLXMRV 75 (111)
T ss_dssp HHHHHHHTT---CCHHHHHHHHHHTTCSSHHHHHHHH
T ss_pred HHHHHHHHC---CCHHHHHHHHHHcCCCCHHHHHHHH
Confidence 355665544 6889999999999999987644433
No 175
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=20.11 E-value=73 Score=27.44 Aligned_cols=63 Identities=11% Similarity=0.096 Sum_probs=38.5
Q ss_pred HHHHHHHHHhhCC--CCcccHHHHHHHHHHH----HHHHHHHHHHHHHHHhhCCCCccchhhHHHHHhhcC
Q psy13186 20 RASINKIIKEILP--NIRVANESRELVMNCC----MEFIHLISSEANDICNEQQKKTINAEHVLQALDQLG 84 (170)
Q Consensus 20 ~AtV~riiKe~LP--~~~iSkdA~e~i~~c~----~eFI~~lsseAnei~~~~~RKTIs~edVl~AL~~Lg 84 (170)
......|++..+. ++.++.++...|...+ .+....|-. +...|...++ .|+.++|-.+|..+.
T Consensus 265 ~e~r~~iL~~~~~~~~~~i~~e~l~~la~~~~gn~R~l~~~L~~-~~~~a~~~~~-~It~~~~~~~l~~~~ 333 (440)
T 2z4s_A 265 EETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAIIK-LLVYKETTGK-EVDLKEAILLLKDFI 333 (440)
T ss_dssp HHHHHHHHHHHHHHHTCCCCTTHHHHHHHHCCSCHHHHHHHHHH-HHHHHHHSSS-CCCHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCHHHHHHHHHH-HHHHHHHhCC-CCCHHHHHHHHHHHh
Confidence 3345555555543 5778888887777653 233333322 3333444454 699999999999875
No 176
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=20.09 E-value=99 Score=18.92 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=24.8
Q ss_pred HHHhhCCCCccchhhHHHHHhhcC-CCccHHHHHHHH
Q psy13186 61 DICNEQQKKTINAEHVLQALDQLG-FGDYKSEAEEVM 96 (170)
Q Consensus 61 ei~~~~~RKTIs~edVl~AL~~Lg-F~~yi~~l~~~l 96 (170)
.....++.-+|+.+++..+|..+| +.---..+...+
T Consensus 15 ~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~ 51 (81)
T 1c7v_A 15 KVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAM 51 (81)
T ss_dssp HHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHH
T ss_pred HHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence 344556667899999999999998 654344444444
No 177
>4h9n_C Death domain-associated protein 6; histone chaperone, DNA binding protein-apoptosis complex; 1.95A {Homo sapiens} PDB: 4h9o_C
Probab=20.00 E-value=3.4e+02 Score=21.99 Aligned_cols=41 Identities=27% Similarity=0.386 Sum_probs=29.3
Q ss_pred CCCccHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCHHHHHHHHHHHHHHHHH
Q psy13186 84 GFGDYKSEAEEVMKDCKIVAANRKKQSNRLENLGIPEEELLRQQQELFAKARE 136 (170)
Q Consensus 84 gF~~yi~~l~~~l~~~Ke~~k~r~~k~~k~~~~g~~eEel~~~Q~eLF~~Ar~ 136 (170)
.|+||..-+.-+... ++-.+.||+..++.+.=++.|-+--.
T Consensus 105 ~FPDy~DIl~~v~~~------------N~~~~L~l~~~~~~~iA~daF~~vG~ 145 (212)
T 4h9n_C 105 TFPDYGDVLRAVEKA------------AARHSLGLPRQQLQLMAQDAFRDVGI 145 (212)
T ss_dssp CCCCHHHHHHHHHHH------------HHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH------------HHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 399998777654421 22367999999999988888876543
Done!