Your job contains 1 sequence.
>psy13192
MSSYDIKVHSNWCQHEYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECC
KERGIGYYLEVCLALAPFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGI
ELIIKKRGMEPEGGGEIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVD
TAKGILLSYLPDVYLSVDHCKGPKSGKSPGFGGSIYAESSTGVVLTADAVSPPPPATRTV
PETLGEQLAYNLLEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHL
KQFFGLKFKLEHESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFG
LKFKLERESEINPEQEEDEKPLRCGQEKVQLTCVHIFHLDT
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13192
(401 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|G3V7Z1 - symbol:Rcl1 "Protein Rcl1" species:101... 811 8.5e-81 1
UNIPROTKB|Q9Y2P8 - symbol:RCL1 "RNA 3'-terminal phosphate... 807 2.2e-80 1
UNIPROTKB|E2RAG1 - symbol:RCL1 "Uncharacterized protein" ... 806 2.9e-80 1
MGI|MGI:1913275 - symbol:Rcl1 "RNA terminal phosphate cyc... 805 3.7e-80 1
UNIPROTKB|Q2KHX8 - symbol:RCL1 "RNA 3'-terminal phosphate... 803 6.0e-80 1
UNIPROTKB|E1C1K6 - symbol:RCL1 "Uncharacterized protein" ... 798 2.0e-79 1
FB|FBgn0020909 - symbol:Rtc1 "Rtc1" species:7227 "Drosoph... 796 3.3e-79 1
UNIPROTKB|F1SK46 - symbol:RCL1 "Uncharacterized protein" ... 792 8.7e-79 1
ZFIN|ZDB-GENE-040930-11 - symbol:rcl1 "RNA terminal phosp... 791 1.1e-78 1
DICTYBASE|DDB_G0282803 - symbol:rcl1 "RNA 3'-terminal pho... 694 2.1e-68 1
WB|WBGene00022852 - symbol:ZK1127.5 species:6239 "Caenorh... 622 9.0e-61 1
TAIR|locus:504956443 - symbol:AT5G22100 species:3702 "Ara... 548 6.3e-53 1
POMBASE|SPAC12G12.06c - symbol:SPAC12G12.06c "rRNA proces... 524 2.2e-50 1
UNIPROTKB|F1LRB6 - symbol:Rcl1 "Protein Rcl1" species:101... 282 4.3e-50 2
RGD|1305320 - symbol:Rcl1 "RNA terminal phosphate cyclase... 282 2.1e-48 2
CGD|CAL0001795 - symbol:RCL1 species:5476 "Candida albica... 465 3.9e-44 1
UNIPROTKB|Q5VZU3 - symbol:RCL1 "RNA 3'-terminal phosphate... 459 1.7e-43 1
SGD|S000005370 - symbol:RCL1 "Endonuclease that cleaves p... 416 6.1e-39 1
UNIPROTKB|Q5VZU1 - symbol:RCL1 "RCL1" species:9606 "Homo ... 346 1.6e-31 1
GENEDB_PFALCIPARUM|PF14_0677 - symbol:PF14_0677 "RNA 3'-T... 265 1.6e-29 2
UNIPROTKB|Q8I717 - symbol:PF14_0677 "RNA 3'-Terminal Phos... 265 1.6e-29 2
UNIPROTKB|Q5VYW8 - symbol:RCL1 "RNA 3'-terminal phosphate... 283 7.6e-25 1
UNIPROTKB|G4MZF3 - symbol:MGG_04422 "18S rRNA biogenesis ... 222 9.9e-25 2
UNIPROTKB|Q5VZU2 - symbol:RCL1 "RNA 3'-terminal phosphate... 280 1.6e-24 1
ASPGD|ASPL0000041674 - symbol:AN1474 species:162425 "Emer... 268 7.9e-22 1
UNIPROTKB|E1C1Y0 - symbol:RTCD1 "Uncharacterized protein"... 223 2.7e-16 1
RGD|1303111 - symbol:Rtcd1 "RNA terminal phosphate cyclas... 210 1.0e-14 1
ZFIN|ZDB-GENE-030131-9687 - symbol:rtca "RNA 3'-terminal ... 207 2.2e-14 1
UNIPROTKB|E2RQG6 - symbol:RTCA "Uncharacterized protein" ... 210 3.2e-14 1
UNIPROTKB|Q2HJ88 - symbol:RTCA "RNA 3'-terminal phosphate... 205 4.0e-14 1
UNIPROTKB|O00442 - symbol:RTCA "RNA 3'-terminal phosphate... 202 9.0e-14 1
MGI|MGI:1913618 - symbol:Rtca "RNA 3'-terminal phosphate ... 196 4.5e-13 1
DICTYBASE|DDB_G0276159 - symbol:rtc1 "RNA 3'-terminal pho... 178 8.4e-11 1
UNIPROTKB|F1S564 - symbol:RTCA "Uncharacterized protein" ... 167 9.8e-10 1
FB|FBgn0025630 - symbol:CG4061 species:7227 "Drosophila m... 147 1.8e-07 1
>UNIPROTKB|G3V7Z1 [details] [associations]
symbol:Rcl1 "Protein Rcl1" species:10116 "Rattus
norvegicus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 EMBL:CH473953 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 GeneTree:ENSGT00530000063404
Ensembl:ENSRNOT00000020809 Uniprot:G3V7Z1
Length = 373
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 158/297 (53%), Positives = 208/297 (70%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E + +RL+DK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C RGIGYYLE L L
Sbjct: 46 DFEASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLEALLCL 105
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
APF K L+IV+RGVTN+Q DPSVD KA LP+LKQF + EL I +RGM P GGG
Sbjct: 106 APFMKHPLKIVLRGVTNDQVDPSVDVLKATALPLLKQFGIDGESFELKILRRGMPPGGGG 165
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
E+ F+CP+ K +KPVQ D GKIKRIRG +++RVSP +ANRIVD+A+GIL ++PD+Y+
Sbjct: 166 EVLFSCPVRKVLKPVQLTDPGKIKRIRGMAYSVRVSPQMANRIVDSARGILNKFIPDIYI 225
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPP-PATRTVPETLGEQLAYNLLE 254
DH + AE++ G L+A+ S P +PE LG A LLE
Sbjct: 226 YTDHMKGVNSGKSPGFGLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCAKLLLE 285
Query: 255 EISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 311
EI RGG VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E
Sbjct: 286 EIYRGGCVDSTSQSLVLLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFKVE 342
Score = 185 (70.2 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 307 KFKLE--HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFK 364
K LE + G VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK
Sbjct: 281 KLLLEEIYRGGCVDSTSQSLVLLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFK 340
Query: 365 LERESEINPEQEEDEKPLRCGQEKVQLTCVHI 396
+E + P EE L+ G +KV +TCV I
Sbjct: 341 VETK----PCGEE----LK-GGDKVLMTCVGI 363
>UNIPROTKB|Q9Y2P8 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=NAS]
[GO:0005730 "nucleolus" evidence=NAS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
EMBL:AJ276894 GO:GO:0005730 GO:GO:0042254 GO:GO:0006396
EMBL:CH471071 SUPFAM:SSF55205 EMBL:AL353151 eggNOG:COG0430
HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 CTD:10171 HOVERGEN:HBG014327 OrthoDB:EOG4X97H9
EMBL:AK022904 EMBL:AL158147 EMBL:BC001025 EMBL:AF067172
EMBL:AF161456 IPI:IPI00294229 RefSeq:NP_005763.3 UniGene:Hs.194121
ProteinModelPortal:Q9Y2P8 SMR:Q9Y2P8 STRING:Q9Y2P8
PhosphoSite:Q9Y2P8 DMDM:90103518 PaxDb:Q9Y2P8 PeptideAtlas:Q9Y2P8
PRIDE:Q9Y2P8 DNASU:10171 Ensembl:ENST00000381750 GeneID:10171
KEGG:hsa:10171 UCSC:uc003zis.2 GeneCards:GC09P004782
HGNC:HGNC:17687 MIM:611405 neXtProt:NX_Q9Y2P8 PharmGKB:PA134894364
InParanoid:Q9Y2P8 PhylomeDB:Q9Y2P8 ChiTaRS:RCL1 GenomeRNAi:10171
NextBio:38512 ArrayExpress:Q9Y2P8 Bgee:Q9Y2P8 CleanEx:HS_RCL1
Genevestigator:Q9Y2P8 GO:GO:0003963 Uniprot:Q9Y2P8
Length = 373
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 156/297 (52%), Positives = 208/297 (70%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E + +RL+DK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C RGIGYYLE L L
Sbjct: 46 DFEASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCL 105
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
APF K L+IV+RGVTN+Q DPSVD KA LP+LKQF + EL I +RGM P GGG
Sbjct: 106 APFMKHPLKIVLRGVTNDQVDPSVDVLKATALPLLKQFGIDGESFELKIVRRGMPPGGGG 165
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
E+ F+CP+ K +KP+Q D GKIKRIRG +++RVSP +ANRIVD+A+ IL ++PD+Y+
Sbjct: 166 EVVFSCPVRKVLKPIQLTDPGKIKRIRGMAYSVRVSPQMANRIVDSARSILNKFIPDIYI 225
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPP-PATRTVPETLGEQLAYNLLE 254
DH + AE+++G L+A+ S P +PE LG A LLE
Sbjct: 226 YTDHMKGVNSGKSPGFGLSLVAETTSGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLE 285
Query: 255 EISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 311
EI RGG VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E
Sbjct: 286 EIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIE 342
Score = 188 (71.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 44/85 (51%), Positives = 58/85 (68%)
Query: 312 HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLERESEI 371
+ G VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E +
Sbjct: 288 YRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETK--- 344
Query: 372 NPEQEEDEKPLRCGQEKVQLTCVHI 396
P EE L+ G +KV +TCV I
Sbjct: 345 -PCGEE----LK-GGDKVLMTCVGI 363
>UNIPROTKB|E2RAG1 [details] [associations]
symbol:RCL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 CTD:10171
GeneTree:ENSGT00530000063404 EMBL:AAEX03000616 EMBL:AAEX03000617
EMBL:AAEX03000618 RefSeq:XP_541299.3 Ensembl:ENSCAFT00000003309
GeneID:484183 KEGG:cfa:484183 NextBio:20858399 Uniprot:E2RAG1
Length = 373
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 155/297 (52%), Positives = 208/297 (70%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E + +RL+DK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C R IGYYLE L L
Sbjct: 46 DFEASFIRLLDKVTNGSRIEINQTGTTLYYQPGLLYGGSVEHDCNVLRSIGYYLESLLCL 105
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
APF K L+IV+RGVTN+Q DPSVD KA LP+LKQF + EL + +RGM P GGG
Sbjct: 106 APFMKHPLRIVLRGVTNDQVDPSVDVLKATALPLLKQFGIDGESFELKVVRRGMPPGGGG 165
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
E++F+CP+ K +KP+Q D GKIKRIRGT +++RVSP +ANRIVD+A+ IL ++PD+Y+
Sbjct: 166 EVFFSCPVRKVLKPIQLTDPGKIKRIRGTAYSVRVSPQMANRIVDSARSILNKFIPDIYI 225
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPP-PATRTVPETLGEQLAYNLLE 254
DH + AE++ G L+A+ S P +PE LG A LLE
Sbjct: 226 YTDHMKGINSGKSPGFGLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCAKLLLE 285
Query: 255 EISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 311
EI RGG VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E
Sbjct: 286 EIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIE 342
Score = 188 (71.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 46/92 (50%), Positives = 61/92 (66%)
Query: 307 KFKLE--HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFK 364
K LE + G VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK
Sbjct: 281 KLLLEEIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFK 340
Query: 365 LERESEINPEQEEDEKPLRCGQEKVQLTCVHI 396
+E + P EE L+ G +KV +TCV +
Sbjct: 341 IETK----PCGEE----LK-GGDKVLMTCVGV 363
>MGI|MGI:1913275 [details] [associations]
symbol:Rcl1 "RNA terminal phosphate cyclase-like 1"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003963 "RNA-3'-phosphate cyclase activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=ISA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
MGI:MGI:1913275 EMBL:AJ276895 GO:GO:0003824 GO:GO:0005730
SUPFAM:SSF55205 GO:GO:0006364 eggNOG:COG0430 HOGENOM:HOG000157670
KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 PROSITE:PS01287
CTD:10171 GeneTree:ENSGT00530000063404 HOVERGEN:HBG014327
OrthoDB:EOG4X97H9 ChiTaRS:RCL1 EMBL:AK009709 EMBL:BC004574
IPI:IPI00122220 RefSeq:NP_067500.1 UniGene:Mm.28630
ProteinModelPortal:Q9JJT0 SMR:Q9JJT0 STRING:Q9JJT0
PhosphoSite:Q9JJT0 PaxDb:Q9JJT0 PRIDE:Q9JJT0
Ensembl:ENSMUST00000064393 GeneID:59028 KEGG:mmu:59028
UCSC:uc008hda.1 InParanoid:Q9JJT0 NextBio:314610 Bgee:Q9JJT0
CleanEx:MM_RCL1 Genevestigator:Q9JJT0 GermOnline:ENSMUSG00000024785
Uniprot:Q9JJT0
Length = 373
Score = 805 (288.4 bits), Expect = 3.7e-80, P = 3.7e-80
Identities = 157/297 (52%), Positives = 207/297 (69%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E + +RL+DK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C RGIGYYLE L L
Sbjct: 46 DFEASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLEALLCL 105
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
APF K L+IV+RGVTN+Q DPSVD KA LP+LKQF + EL I +RGM P GGG
Sbjct: 106 APFMKHPLKIVLRGVTNDQVDPSVDVLKATALPLLKQFGIDGESFELKILRRGMPPGGGG 165
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
E+ F+CP+ K +KPVQ D GKIKRIRG +++RVSP +ANRIVD+A+ IL ++PD+Y+
Sbjct: 166 EVLFSCPVRKVLKPVQLTDPGKIKRIRGMAYSVRVSPQMANRIVDSARSILNKFIPDIYI 225
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPP-PATRTVPETLGEQLAYNLLE 254
DH + AE++ G L+A+ S P +PE LG A LLE
Sbjct: 226 YTDHMKGVSSGKSPGFGLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCAKLLLE 285
Query: 255 EISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 311
EI RGG VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E
Sbjct: 286 EIYRGGCVDSTNQSLVLLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFKVE 342
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 307 KFKLE--HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFK 364
K LE + G VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK
Sbjct: 281 KLLLEEIYRGGCVDSTNQSLVLLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQVMFK 340
Query: 365 LERESEINPEQEEDEKPLRCGQEKVQLTCVHI 396
+E + P EE L+ G +KV +TCV I
Sbjct: 341 VETK----PCGEE----LK-GGDKVLMTCVGI 363
>UNIPROTKB|Q2KHX8 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430
HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 EMBL:BC112844 IPI:IPI00702914 RefSeq:NP_001070599.1
UniGene:Bt.27964 ProteinModelPortal:Q2KHX8 STRING:Q2KHX8
PRIDE:Q2KHX8 Ensembl:ENSBTAT00000024840 GeneID:768075
KEGG:bta:768075 CTD:10171 GeneTree:ENSGT00530000063404
HOVERGEN:HBG014327 InParanoid:Q2KHX8 OrthoDB:EOG4X97H9
NextBio:20918430 Uniprot:Q2KHX8
Length = 373
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 155/297 (52%), Positives = 208/297 (70%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E + +RL+DK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C RGIGYYLE L L
Sbjct: 46 DFEASFIRLLDKVTNGSRIEINQTGTTLYYQPGLLYGGSMEHDCSVLRGIGYYLESLLCL 105
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
APF K L+IV+RGVTN+Q DPSVD KA LP+LKQF + EL + +RGM P GGG
Sbjct: 106 APFMKHPLRIVLRGVTNDQVDPSVDVLKATALPLLKQFGIDGESFELKVVRRGMPPGGGG 165
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
E++F+CP+ K +KP+Q D GKIKRIRG +++RVSP +ANRIVD+A+ IL ++PD+Y+
Sbjct: 166 EVFFSCPVRKVLKPIQLIDPGKIKRIRGMAYSVRVSPQMANRIVDSARSILNKFIPDIYI 225
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPP-PATRTVPETLGEQLAYNLLE 254
DH + AE++ G L+A+ S P +PE LG A LLE
Sbjct: 226 YTDHMKGINSGKSPGFGLSLVAETTNGTFLSAELASNPQGQGAAMLPEDLGRNCARLLLE 285
Query: 255 EISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 311
EI RGG VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E
Sbjct: 286 EIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIE 342
Score = 188 (71.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 44/85 (51%), Positives = 58/85 (68%)
Query: 312 HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLERESEI 371
+ G VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E +
Sbjct: 288 YRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETK--- 344
Query: 372 NPEQEEDEKPLRCGQEKVQLTCVHI 396
P EE L+ G +KV +TCV I
Sbjct: 345 -PCGEE----LK-GGDKVLMTCVGI 363
>UNIPROTKB|E1C1K6 [details] [associations]
symbol:RCL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 CTD:10171
GeneTree:ENSGT00530000063404 EMBL:AADN02066346 EMBL:AADN02066347
EMBL:AADN02066348 IPI:IPI00571045 RefSeq:XP_424808.1
UniGene:Gga.9558 Ensembl:ENSGALT00000024230 GeneID:427222
KEGG:gga:427222 NextBio:20828512 Uniprot:E1C1K6
Length = 374
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 154/300 (51%), Positives = 210/300 (70%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E +RLIDK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C R IGYYLE L L
Sbjct: 47 DFEACFIRLIDKVTNGSRIEINQTGTTLYYQPGLLYGGSLEHDCSPSRSIGYYLESLLCL 106
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
APF K L+IV+RGVTN+Q DPSVD KA LP+LK+F + +E+ I +RGM P+GGG
Sbjct: 107 APFMKHPLKIVLRGVTNDQVDPSVDVLKATALPLLKKFGIDGESLEIKINRRGMPPKGGG 166
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
EI F CP+ K ++P+Q D GKIKRIRGT +++RVSP +ANR+V++A+ +L +LPDVY+
Sbjct: 167 EILFACPVRKVLQPIQFTDPGKIKRIRGTAYSVRVSPQMANRMVESARSVLNKFLPDVYI 226
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPP-PATRTVPETLGEQLAYNLLE 254
DH + AE+ G +L+A+ S P +PE LG+ A LLE
Sbjct: 227 YTDHMKGISSGKSPGFGICLIAETINGTILSAELASNPQGQGAAVLPEELGQNCAKLLLE 286
Query: 255 EISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLEHES 314
EI RGG VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHL+ FF + FK+E +S
Sbjct: 287 EIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLRSFFQIMFKIEMKS 346
Score = 201 (75.8 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/92 (51%), Positives = 61/92 (66%)
Query: 307 KFKLE--HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFK 364
K LE + G VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHL+ FF + FK
Sbjct: 282 KLLLEEIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLRSFFQIMFK 341
Query: 365 LERESEINPEQEEDEKPLRCGQEKVQLTCVHI 396
+E +S PE+E G EKV +TCV I
Sbjct: 342 IEMKS---PEEEHK------GGEKVLMTCVGI 364
>FB|FBgn0020909 [details] [associations]
symbol:Rtc1 "Rtc1" species:7227 "Drosophila melanogaster"
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
GO:GO:0003824 GO:GO:0005730 EMBL:AE014298 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 GeneTree:ENSGT00530000063404
EMBL:AY058762 EMBL:X04754 EMBL:M15898 RefSeq:NP_572919.1
UniGene:Dm.4106 ProteinModelPortal:P56175 SMR:P56175 STRING:P56175
PaxDb:P56175 EnsemblMetazoa:FBtr0073820 GeneID:32338
KEGG:dme:Dmel_CG11130 UCSC:CG11130-RA CTD:32338 FlyBase:FBgn0020909
InParanoid:P56175 OrthoDB:EOG4CZ8XB PhylomeDB:P56175
GenomeRNAi:32338 NextBio:777999 Bgee:P56175 GermOnline:CG11130
Uniprot:P56175
Length = 384
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 152/300 (50%), Positives = 207/300 (69%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
EYE++L+RL+DK+TNGT +E+N GT+++F PG+L GG + H+CC +RGIGYYL+ +AL
Sbjct: 50 EYEISLIRLLDKITNGTKIELNPAGTSVMFSPGLLHGGQLNHDCCVQRGIGYYLDALIAL 109
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
PFCK LQ +RGVTN++ PSVD K L +LK+FL+VD G+EL + +RG+ P GGG
Sbjct: 110 GPFCKSPLQCTLRGVTNSKDSPSVDHIKGAALSLLKRFLLVDEGLELKVVRRGVAPLGGG 169
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
EI F CP+ KS++ +Q + G +KRIRGTV+A +VSPA+ANR V+ AKG +L +LPDVY+
Sbjct: 170 EIIFRCPVRKSLRAIQFQSQGMVKRIRGTVYACKVSPAMANRTVEAAKGCMLKFLPDVYI 229
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVS---PPPPATRTVPETLGEQLAYNL 252
D + AE++ GV AD S T ++PE LG+++A L
Sbjct: 230 YTDQNKGKMSGNSPGFGICLIAETTDGVCFAADCCSNTREESEDTPSIPENLGKEVALRL 289
Query: 253 LEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLEH 312
L+EI RGG VDSS+Q L LY+AL QK VS+ L G LS YTV FL+HL+ FF + FKLE+
Sbjct: 290 LDEIYRGGCVDSSYQWLAALYIALGQKHVSKFLTGALSNYTVHFLQHLRDFFSITFKLEN 349
Score = 190 (71.9 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 45/86 (52%), Positives = 54/86 (62%)
Query: 312 HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLERESEI 371
+ G VDSS+Q L LY+AL QK VS+ L G LS YTV FL+HL+ FF + FKLE
Sbjct: 294 YRGGCVDSSYQWLAALYIALGQKHVSKFLTGALSNYTVHFLQHLRDFFSITFKLE----- 348
Query: 372 NPEQE-EDEKPLRCGQEKVQLTCVHI 396
NPE E EDE G +KV + CV I
Sbjct: 349 NPEAEDEDEAENVRGAQKVLMACVGI 374
>UNIPROTKB|F1SK46 [details] [associations]
symbol:RCL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 GeneTree:ENSGT00530000063404 EMBL:CU467061
Ensembl:ENSSSCT00000005750 Uniprot:F1SK46
Length = 373
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 154/297 (51%), Positives = 205/297 (69%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E + +RL+DK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C R IGYYLE L L
Sbjct: 46 DFEASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGGSVEHDCSILRSIGYYLESLLCL 105
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
APF K L+IV+RGVTN+Q DPSVD K LP+LKQF + EL I +RGM P GGG
Sbjct: 106 APFMKHPLRIVLRGVTNDQVDPSVDVLKVTALPLLKQFGIDGESFELKIVRRGMPPGGGG 165
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
E+ F+CP+ K +KP+Q D GKIKRIRG +++RVSP +ANRIVD+A+ IL ++PD+Y+
Sbjct: 166 EVLFSCPVRKVLKPIQLTDPGKIKRIRGCRYSVRVSPQMANRIVDSARSILNKFIPDIYI 225
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPP-PATRTVPETLGEQLAYNLLE 254
DH + AE++ G L+A+ S P +PE LG A LLE
Sbjct: 226 YTDHMKGVNSGKSPGFGLSLVAETTNGTFLSAELASNPQGQGAAVLPEDLGRNCARLLLE 285
Query: 255 EISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 311
EI RGG VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E
Sbjct: 286 EIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIE 342
Score = 188 (71.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 44/85 (51%), Positives = 58/85 (68%)
Query: 312 HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLERESEI 371
+ G VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E +
Sbjct: 288 YRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETK--- 344
Query: 372 NPEQEEDEKPLRCGQEKVQLTCVHI 396
P EE L+ G +KV +TCV I
Sbjct: 345 -PCGEE----LK-GGDKVLMTCVGI 363
>ZFIN|ZDB-GENE-040930-11 [details] [associations]
symbol:rcl1 "RNA terminal phosphate cyclase-like 1"
species:7955 "Danio rerio" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 ZFIN:ZDB-GENE-040930-11
GO:GO:0003824 GO:GO:0005730 GO:GO:0042254 GO:GO:0006396
SUPFAM:SSF55205 KO:K11108 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 PROSITE:PS01287
CTD:10171 HOVERGEN:HBG014327 EMBL:AY648776 IPI:IPI00500893
RefSeq:NP_001003865.1 UniGene:Dr.31536 ProteinModelPortal:Q6DRI3
STRING:Q6DRI3 PRIDE:Q6DRI3 GeneID:445388 KEGG:dre:445388
NextBio:20832092 ArrayExpress:Q6DRI3 Bgee:Q6DRI3 Uniprot:Q6DRI3
Length = 367
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 149/304 (49%), Positives = 209/304 (68%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E + +R++DKLTNGT +E+N+TGT L +QPG+L GG ++HEC +R +GYYLE L L
Sbjct: 39 DFEASFIRMLDKLTNGTRIEINQTGTVLFYQPGLLYGGSVEHECNVQRSVGYYLEALLML 98
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
APF K ++ V++G+TN+ DPSVD K +P++K+F + G+E+ + KRGM P GGG
Sbjct: 99 APFMKTPIKAVLKGITNHPTDPSVDLLKVTAVPLMKRFGINGDGLEIKVVKRGMAPGGGG 158
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
E++F+CP+ +S+KPVQ + GKIKRIRGT F++RVSP +ANRIVD+A+ IL ++PD+Y+
Sbjct: 159 EVHFSCPVSRSMKPVQLTEAGKIKRIRGTAFSVRVSPQMANRIVDSARSILNKFIPDIYI 218
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPP-PATRTVPETLGEQLAYNLLE 254
DH + AE+ GV L A+ VS P +PE LG A LLE
Sbjct: 219 YTDHMKGPNSGKSPGFGLVLVAETLNGVFLGAEVVSTPQGQGEMQLPEDLGRNCAKLLLE 278
Query: 255 EISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLEHES 314
EI RGG VDS+ QSL LYM L Q++VS+ L+GPLSPYT+ FLRH++ FF + FK+E +
Sbjct: 279 EIYRGGCVDSTNQSLALLYMTLGQQEVSKTLLGPLSPYTMDFLRHIRDFFQIMFKIETQK 338
Query: 315 GMVD 318
D
Sbjct: 339 PSED 342
Score = 190 (71.9 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 43/90 (47%), Positives = 59/90 (65%)
Query: 307 KFKLE--HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFK 364
K LE + G VDS+ QSL LYM L Q++VS+ L+GPLSPYT+ FLRH++ FF + FK
Sbjct: 274 KLLLEEIYRGGCVDSTNQSLALLYMTLGQQEVSKTLLGPLSPYTMDFLRHIRDFFQIMFK 333
Query: 365 LERESEINPEQEEDEKPLRCGQEKVQLTCV 394
+E + P ++E + G EKV +TCV
Sbjct: 334 IETQK---PSEDECK-----GGEKVLMTCV 355
>DICTYBASE|DDB_G0282803 [details] [associations]
symbol:rcl1 "RNA 3'-terminal phosphate cyclase family
protein" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 dictyBase:DDB_G0282803
GO:GO:0045335 GO:GO:0003824 GO:GO:0005730 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0006396
SUPFAM:SSF55205 eggNOG:COG0430 KO:K11108 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 RefSeq:XP_640201.2 ProteinModelPortal:Q54S38
STRING:Q54S38 EnsemblProtists:DDB0238227 GeneID:8623741
KEGG:ddi:DDB_G0282803 OMA:FISANTA ProtClustDB:CLSZ2430476
Uniprot:Q54S38
Length = 371
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 136/325 (41%), Positives = 201/325 (61%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGL-IQHECCKERGIGYYLEVCLA 74
+YE + LRL+DK+TNG+ +E+N TGT + + PGI++GG I HEC RGIGY++E +
Sbjct: 40 DYEASFLRLVDKITNGSKIEINSTGTQITYIPGIIIGGKGITHECGTVRGIGYFVEALIC 99
Query: 75 LAPFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGG 134
L PF K L I + G+TNN D ++D+ + LP++++F ++ G+ + I KRG P GG
Sbjct: 100 LGPFAKAPLDITLNGITNNDIDLTIDTIRTTTLPIIRKF-GIEEGLIIKIIKRGAPPNGG 158
Query: 135 GEIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVY 194
G + F CPI+ +K +Q D GKI+RIRG +A R+SP +NR++D AKG+LL Y PDVY
Sbjct: 159 GSVNFKCPIVPHLKAIQLIDEGKIRRIRGIAYATRISPQFSNRVLDKAKGLLLEYTPDVY 218
Query: 195 LSVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVS-----------PPPPATRTVPET 243
+S DH + AE++TG L+A+ +S +T PE
Sbjct: 219 ISSDHYKGNESGLSPGYGLTLVAETTTGCCLSAECMSNTGIATTEQQLQKQKSTSETPED 278
Query: 244 LGEQLAYNLLEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQF 303
LGE+ A+ LLEEI GG +DS QSL L+M L +D+S++ +G ++PYT++F+R L+ F
Sbjct: 279 LGERTAFALLEEIFNGGCIDSHNQSLALLFMVLCPEDISKVRLGKITPYTIEFIRQLRDF 338
Query: 304 FGLKFKLEHESGMVDSSFQSLGCLY 328
FG+ FK+E + F LG Y
Sbjct: 339 FGVTFKIEPDQNSKTVLFTCLGIGY 363
Score = 141 (54.7 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 315 GMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 366
G +DS QSL L+M L +D+S++ +G ++PYT++F+R L+ FFG+ FK+E
Sbjct: 295 GCIDSHNQSLALLFMVLCPEDISKVRLGKITPYTIEFIRQLRDFFGVTFKIE 346
>WB|WBGene00022852 [details] [associations]
symbol:ZK1127.5 species:6239 "Caenorhabditis elegans"
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0003824
GO:GO:0005730 GO:GO:0002119 GO:GO:0016246 GO:GO:0010171
GO:GO:0040011 GO:GO:0042254 GO:GO:0006396 GO:GO:0000910
GO:GO:0040035 SUPFAM:SSF55205 EMBL:FO081697 GO:GO:0007276
eggNOG:COG0430 HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 GeneTree:ENSGT00530000063404
PIR:G88196 RefSeq:NP_495445.2 ProteinModelPortal:Q23400 SMR:Q23400
STRING:Q23400 PaxDb:Q23400 EnsemblMetazoa:ZK1127.5.1
EnsemblMetazoa:ZK1127.5.2 GeneID:174151 KEGG:cel:CELE_ZK1127.5
UCSC:ZK1127.5 CTD:174151 WormBase:ZK1127.5 InParanoid:Q23400
NextBio:882755 Uniprot:Q23400
Length = 379
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 120/298 (40%), Positives = 192/298 (64%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E L+ L++K+TNGT +E++ TGT ++F+PG++ GG++ +C ER I Y+LE L L
Sbjct: 44 DFESKLIGLLEKVTNGTKVEISRTGTQVIFRPGMITGGVVNLDCGTERCISYFLEPLLLL 103
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
+PFCK + I ++GVTN + SVD KA L V +F++ D +++ I+ RG++PEGGG
Sbjct: 104 SPFCKVPMVIKLKGVTNAPGEISVDGMKASWLKVYNKFVLNDEKLDIKIQARGLKPEGGG 163
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
+ F PI+K+++PV+ + +GK+ +IRG + +V+P++A R++D AK + Y+ DVY+
Sbjct: 164 VVVFTAPIVKTLRPVKRQQVGKVCKIRGQAYVTKVTPSLAYRMIDAAKKAMHGYISDVYI 223
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRT--VPETLGEQLAYNLL 253
+VD + AE++ GV+ A+A+S P + +PE +G + + LL
Sbjct: 224 TVDQRKGDAGGASPGYGLFLTAETTEGVIYQAEAISRPKGESGVPILPEDIGIEAGHALL 283
Query: 254 EEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 311
++I GG +DSS Q L +M L KDVS L GPL Y+V LRHLKQFF ++FK+E
Sbjct: 284 QQIYMGGALDSSAQILASTFMTLCPKDVSHFLYGPLPMYSVHALRHLKQFFEIEFKME 341
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/83 (43%), Positives = 49/83 (59%)
Query: 315 GMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLERESEINPE 374
G +DSS Q L +M L KDVS L GPL Y+V LRHLKQFF ++FK+E +
Sbjct: 290 GALDSSAQILASTFMTLCPKDVSHFLYGPLPMYSVHALRHLKQFFEIEFKME---DFKKT 346
Query: 375 QEEDEKPLRCGQ-EKVQLTCVHI 396
+E+E L+ G +K +T V +
Sbjct: 347 LKEEEADLKTGSADKAMVTAVGV 369
>TAIR|locus:504956443 [details] [associations]
symbol:AT5G22100 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003963
"RNA-3'-phosphate cyclase activity" evidence=ISS] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003824 GO:GO:0005730 GO:GO:0042254 GO:GO:0006396
SUPFAM:SSF55205 EMBL:AL589883 EMBL:BT002059 IPI:IPI00532522
RefSeq:NP_680196.1 UniGene:At.44338 UniGene:At.45633
ProteinModelPortal:Q9C578 SMR:Q9C578 STRING:Q9C578 PaxDb:Q9C578
PRIDE:Q9C578 EnsemblPlants:AT5G22100.1 GeneID:832271
KEGG:ath:AT5G22100 TAIR:At5g22100 eggNOG:COG0430
HOGENOM:HOG000157670 InParanoid:Q9C578 KO:K11108 OMA:FMKHPLR
PhylomeDB:Q9C578 ProtClustDB:CLSN2690185 Genevestigator:Q9C578
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
TIGRFAMs:TIGR03400 PROSITE:PS01287 Uniprot:Q9C578
Length = 375
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 123/307 (40%), Positives = 187/307 (60%)
Query: 17 YEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGL-IQHECCKERGIGYYLEVCLAL 75
+EVNLLRL++ +T+ +++NETGT L ++PG +VGG + H C R IGYYLE L L
Sbjct: 44 HEVNLLRLLEIVTDDAVVDINETGTRLKYKPGTIVGGKNLVHSCSLSRSIGYYLEPLLLL 103
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
F KK L I ++G+TN+ +D SVD+F++ L ++K+F V +EL I+ RG+ P GGG
Sbjct: 104 GLFGKKPLSIRLKGITNDPRDASVDTFRSTTLNIIKRFGVPAEDLELKIEARGVAPNGGG 163
Query: 136 EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYL 195
E+ P IK++ V + G +K+IRGT F+ RV+ + + A+GI + LPDV++
Sbjct: 164 EVLLTVPNIKTLSAVHWVEEGMVKKIRGTTFSTRVTSDFEHSMRFAARGIFNNLLPDVHI 223
Query: 196 SVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADA-VS-PPPPAT---------RTVPETL 244
DH + AE++TG ++AD VS P T R+ E
Sbjct: 224 FQDHRAGAQAGKSPGYGISLAAETTTGCFISADTTVSCERPDETGELDVEKKERSPAEDT 283
Query: 245 GEQLAYNLLEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFF 304
G ++A LL+EI +GG+VDS+ Q L L AL ++DVS++ +G LSPY V+ LR++K+F
Sbjct: 284 GVEVASWLLQEIEKGGVVDSTHQGLLFLLCALSEQDVSKVRVGTLSPYAVETLRNIKEFL 343
Query: 305 GLKFKLE 311
G+KF ++
Sbjct: 344 GVKFAIK 350
Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 313 ESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 366
+ G+VDS+ Q L L AL ++DVS++ +G LSPY V+ LR++K+F G+KF ++
Sbjct: 297 KGGVVDSTHQGLLFLLCALSEQDVSKVRVGTLSPYAVETLRNIKEFLGVKFAIK 350
>POMBASE|SPAC12G12.06c [details] [associations]
symbol:SPAC12G12.06c "rRNA processing protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004521
"endoribonuclease activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
PomBase:SPAC12G12.06c GO:GO:0005783 EMBL:CU329670 GO:GO:0005730
GO:GO:0004521 SUPFAM:SSF55205 GO:GO:0006364 eggNOG:COG0430
HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 PIR:S62537 RefSeq:NP_592892.1
ProteinModelPortal:Q09870 STRING:Q09870
EnsemblFungi:SPAC12G12.06c.1 GeneID:2542936 KEGG:spo:SPAC12G12.06c
OrthoDB:EOG4VQDZ2 NextBio:20803972 Uniprot:Q09870
Length = 363
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 122/324 (37%), Positives = 188/324 (58%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
+Y+V+ LRL++KLTNG+ +E++ TGT+ +++PG ++GG + H+C +GIGY+LE L L
Sbjct: 45 DYQVSFLRLLEKLTNGSVIEISYTGTSFIYRPGNIIGGRVVHDCPTTKGIGYFLEPILIL 104
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVL-KQFLVVDPGIELIIKKRGMEPEGG 134
F K + + GVT++ +D VD + LP L K+F V D +EL I KRG P GG
Sbjct: 105 CLFAKTPTSLTLTGVTSSNEDIGVDVLRTSVLPSLQKRFQVGDE-LELRILKRGSAPGGG 163
Query: 135 GEIYFNCPIIK-SIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDV 193
GE+ F CP+IK S+ P++ + G++ RIRG + RVSPA ANR+V++A+G+L ++PDV
Sbjct: 164 GEVNFLCPVIKESLPPIRLSEFGRVFRIRGIASSTRVSPAFANRLVESARGVLNPFIPDV 223
Query: 194 YLSVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTVPETLGEQLAYNLL 253
++ D + AE++ G A+ A T PE +G A LL
Sbjct: 224 FIYTDVRRGDECGNSPGYSITLVAETNKGCSYAAEHCGE---AGET-PEDVGSFCAKKLL 279
Query: 254 EEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPL--SPYTVQFLRHLKQFFGLKFKL- 310
E I GG VD Q M L +DV+ +++G L + V FLR +K F +++
Sbjct: 280 EVIESGGCVDPYTQPSTLTGMLLSSEDVNTIVVGQLGITSQLVVFLRDVKALFNCEYRFK 339
Query: 311 EHESGMVDSSFQSLGCLYMALHQK 334
E ESG V+ S LG Y+ ++++
Sbjct: 340 ELESGQVEMS--CLGKGYLNVNRR 361
>UNIPROTKB|F1LRB6 [details] [associations]
symbol:Rcl1 "Protein Rcl1" species:10116 "Rattus
norvegicus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 GO:GO:0003824 GO:GO:0005730 GO:GO:0006396
SUPFAM:SSF55205 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
GeneTree:ENSGT00530000063404 IPI:IPI00382263
Ensembl:ENSRNOT00000048910 ArrayExpress:F1LRB6 Uniprot:F1LRB6
Length = 392
Score = 282 (104.3 bits), Expect = 4.3e-50, Sum P(2) = 4.3e-50
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 9 HSNWCQHEYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYY 68
H + ++E + +RL+DK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C RGIGYY
Sbjct: 42 HGDDDDDDFEASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYY 101
Query: 69 LEVCLALAPFCKKGLQIVMRGVTNNQKDPS 98
LE L LAPF K L+IV+RGVTN+Q DPS
Sbjct: 102 LEALLCLAPFMKHPLKIVLRGVTNDQVDPS 131
Score = 257 (95.5 bits), Expect = 4.3e-50, Sum P(2) = 4.3e-50
Identities = 56/121 (46%), Positives = 74/121 (61%)
Query: 174 IANRIVDTAKGILLSYLPDVYLSVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPP 233
+ANRIVD+A+GIL ++PD+Y+ DH + AE++ G L+A+ S P
Sbjct: 178 MANRIVDSARGILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTNGTFLSAELASNP 237
Query: 234 P-PATRTVPETLGEQLAYNLLEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPY 292
+PE LG A LLEEI RGG VDS+ QSL L M L Q+DVS++L+GPLSPY
Sbjct: 238 QGQGAAVLPEDLGRNCAKLLLEEIYRGGCVDSTSQSLVLLLMTLGQQDVSKVLLGPLSPY 297
Query: 293 T 293
T
Sbjct: 298 T 298
Score = 108 (43.1 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 307 KFKLE--HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYT 348
K LE + G VDS+ QSL L M L Q+DVS++L+GPLSPYT
Sbjct: 255 KLLLEEIYRGGCVDSTSQSLVLLLMTLGQQDVSKVLLGPLSPYT 298
>RGD|1305320 [details] [associations]
symbol:Rcl1 "RNA terminal phosphate cyclase-like 1"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000228 InterPro:IPR013792 RGD:1305320
GO:GO:0003824 GO:GO:0006396 SUPFAM:SSF55205 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 IPI:IPI00382263 EMBL:AY310155
UniGene:Rn.22496 ProteinModelPortal:Q7TQ76 STRING:Q7TQ76
UCSC:RGD:1305320 HOVERGEN:HBG066472 InParanoid:Q7TQ76
Genevestigator:Q7TQ76 Uniprot:Q7TQ76
Length = 447
Score = 282 (104.3 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 50/90 (55%), Positives = 69/90 (76%)
Query: 9 HSNWCQHEYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYY 68
H + ++E + +RL+DK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C RGIGYY
Sbjct: 89 HGDDDDDDFEASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYY 148
Query: 69 LEVCLALAPFCKKGLQIVMRGVTNNQKDPS 98
LE L LAPF K L+IV+RGVTN+Q DPS
Sbjct: 149 LEALLCLAPFMKHPLKIVLRGVTNDQVDPS 178
Score = 257 (95.5 bits), Expect = 2.1e-48, Sum P(2) = 2.1e-48
Identities = 56/121 (46%), Positives = 74/121 (61%)
Query: 174 IANRIVDTAKGILLSYLPDVYLSVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPP 233
+ANRIVD+A+GIL ++PD+Y+ DH + AE++ G L+A+ S P
Sbjct: 225 MANRIVDSARGILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTNGTFLSAELASNP 284
Query: 234 P-PATRTVPETLGEQLAYNLLEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPY 292
+PE LG A LLEEI RGG VDS+ QSL L M L Q+DVS++L+GPLSPY
Sbjct: 285 QGQGAAVLPEDLGRNCAKLLLEEIYRGGCVDSTSQSLVLLLMTLGQQDVSKVLLGPLSPY 344
Query: 293 T 293
T
Sbjct: 345 T 345
Score = 108 (43.1 bits), Expect = 9.4e-33, Sum P(2) = 9.4e-33
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 307 KFKLE--HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYT 348
K LE + G VDS+ QSL L M L Q+DVS++L+GPLSPYT
Sbjct: 302 KLLLEEIYRGGCVDSTSQSLVLLLMTLGQQDVSKVLLGPLSPYT 345
>CGD|CAL0001795 [details] [associations]
symbol:RCL1 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0004521
"endoribonuclease activity" evidence=IEA] [GO:0008047 "enzyme
activator activity" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 CGD:CAL0001795 GO:GO:0003824
GO:GO:0005730 GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205
EMBL:AACQ01000133 eggNOG:COG0430 KO:K11108 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
PROSITE:PS01287 RefSeq:XP_713143.1 ProteinModelPortal:Q59U65
STRING:Q59U65 GeneID:3645199 KEGG:cal:CaO19.1886 Uniprot:Q59U65
Length = 371
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 109/315 (34%), Positives = 175/315 (55%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++EV+ LRL++ +TNG+ +E++ TGTT++++PGI++GG + H C + IGY++E L L
Sbjct: 48 DHEVSFLRLLEAVTNGSHIEISYTGTTIIYRPGIIIGGDLTHNCPDTKSIGYFIEPMLML 107
Query: 76 APFCKKGLQIVMRGVTNNQ-KDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGG 134
APF KK I+ +G+TN D VD+ K G LPV+++F V + + L I KRG P GG
Sbjct: 108 APFSKKKFSIIFKGLTNIAGNDTGVDAIKWGLLPVMEKFGVRE--VSLHILKRGSAPLGG 165
Query: 135 GEIYFNCP-IIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDV 193
GE++ C +I + + D+ K IRG + RVSP+I NR++D+A+ +L +V
Sbjct: 166 GEVHLLCSSLIPQPLTIHALDIPKFSAIRGVAYCTRVSPSIVNRMIDSARAVLKPTGCEV 225
Query: 194 YLSVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTVPETLGEQLAYNLL 253
++ D + AES G + + V + ++PE GE AY LL
Sbjct: 226 NITADVWRGENSGKSPGFGITLVAESKRGWRIVTENVG----SAGSLPEDSGELTAYQLL 281
Query: 254 EEISRGGMVDSSFQSLGCLYMALHQKDVSQLLI--GPLSPYTVQFLRHLKQFFGLK--FK 309
EEIS G+V L +YM + ++D+ +L I + V LR +++ FG + FK
Sbjct: 282 EEISNSGVVGRYQLPLALVYMTIGKEDIGRLKIQKSEIDENLVSVLRDIQEVFGTEAFFK 341
Query: 310 LEHESGMVDSSFQSL 324
+ E D F ++
Sbjct: 342 DDAEELDSDDKFMTV 356
>UNIPROTKB|Q5VZU3 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 GO:GO:0003824 GO:GO:0005730 GO:GO:0042254
GO:GO:0006396 SUPFAM:SSF55205 EMBL:AL353151 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 EMBL:AL158147
UniGene:Hs.194121 HGNC:HGNC:17687 ChiTaRS:RCL1 HOGENOM:HOG000110352
HOVERGEN:HBG054967 IPI:IPI00647354 SMR:Q5VZU3
Ensembl:ENST00000442869 Uniprot:Q5VZU3
Length = 182
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 91/182 (50%), Positives = 121/182 (66%)
Query: 129 MEPEGGGEIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLS 188
M P GGGE+ F+CP+ K +KP+Q D GKIKRIRG +++RVSP +ANRIVD+A+ IL
Sbjct: 1 MPPGGGGEVVFSCPVRKVLKPIQLTDPGKIKRIRGMAYSVRVSPQMANRIVDSARSILNK 60
Query: 189 YLPDVYLSVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPP-PATRTVPETLGEQ 247
++PD+Y+ DH + AE+++G L+A+ S P +PE LG
Sbjct: 61 FIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTSGTFLSAELASNPQGQGAAVLPEDLGRN 120
Query: 248 LAYNLLEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLK 307
A LLEEI RGG VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF +
Sbjct: 121 CARLLLEEIYRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIM 180
Query: 308 FK 309
FK
Sbjct: 181 FK 182
Score = 168 (64.2 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 312 HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFK 364
+ G VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK
Sbjct: 130 YRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFK 182
>SGD|S000005370 [details] [associations]
symbol:RCL1 "Endonuclease that cleaves pre-rRNA at site A2
for 18S rRNA biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=ISS]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IDA] [GO:0008047
"enzyme activator activity" evidence=IDA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 PIRSF:PIRSF005378
SGD:S000005370 GO:GO:0005730 EMBL:BK006948 GO:GO:0004521
GO:GO:0008047 SUPFAM:SSF55205 GO:GO:0030686 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 eggNOG:COG0430 HOGENOM:HOG000157670
KO:K11108 OMA:FMKHPLR Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400 PROSITE:PS01287
GeneTree:ENSGT00530000063404 OrthoDB:EOG4VQDZ2 EMBL:Z74752
PIR:S66692 RefSeq:NP_014633.1 ProteinModelPortal:Q08096 SMR:Q08096
DIP:DIP-4539N IntAct:Q08096 MINT:MINT-566090 STRING:Q08096
PaxDb:Q08096 PeptideAtlas:Q08096 EnsemblFungi:YOL010W GeneID:854152
KEGG:sce:YOL010W CYGD:YOL010w NextBio:975908 Genevestigator:Q08096
GermOnline:YOL010W Uniprot:Q08096
Length = 367
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 96/303 (31%), Positives = 170/303 (56%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
+YEV+ LRLI+ +TNG+ +E++ TGTT++++PGI+VGG H C + +GY++E L L
Sbjct: 47 DYEVSFLRLIESVTNGSVIEISYTGTTVIYRPGIIVGGASTHICPSSKPVGYFVEPMLYL 106
Query: 76 APFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGG 135
APF KK I+ +G+T + D +++ K G +PV+++F V + + + KRG P GGG
Sbjct: 107 APFSKKKFSILFKGITASHNDAGIEAIKWGLMPVMEKFGVRECALHTL--KRGSPPLGGG 164
Query: 136 EIYFNCPIIKSI--KPVQSKDMGK--IKRIRGTVFALRVSPAIANRIVDTAKGILLSYLP 191
E++ ++ S+ +P+ ++ + I I G ++ RVSP++ NR++D AK +L +
Sbjct: 165 EVHL---VVDSLIAQPITMHEIDRPIISSITGVAYSTRVSPSLVNRMIDGAKKVLKNLQC 221
Query: 192 DVYLSVDHCXXXXXXXXXXXXXXIYAESST-GVVLTADAVSPPPPATRTVPETLGEQLAY 250
+V ++ D + A+S G A+ + ++PE LGE++A
Sbjct: 222 EVNITADVWRGENSGKSPGWGITLVAQSKQKGWSYFAEDIGD----AGSIPEELGEKVAC 277
Query: 251 NLLEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGP--LSPYTVQFLRHLKQFFGLKF 308
LLEEIS+ V + L +YM + ++D+ +L I + + LR +K+ F +
Sbjct: 278 QLLEEISKSAAVGRNQLPLAIVYMVIGKEDIGRLRINKEQIDERFIILLRDIKKIFNTEV 337
Query: 309 KLE 311
L+
Sbjct: 338 FLK 340
>UNIPROTKB|Q5VZU1 [details] [associations]
symbol:RCL1 "RCL1" species:9606 "Homo sapiens" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR016443 GO:GO:0003824 GO:GO:0005730
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 EMBL:AL353151
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
EMBL:AL158147 UniGene:Hs.194121 HGNC:HGNC:17687 ChiTaRS:RCL1
EMBL:EF553527 IPI:IPI00646397 SMR:Q5VZU1 STRING:Q5VZU1
Ensembl:ENST00000381728 Ensembl:ENST00000381730
Ensembl:ENST00000448872 UCSC:uc010mhl.1 HOGENOM:HOG000110352
HOVERGEN:HBG054967 Uniprot:Q5VZU1
Length = 187
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 71/150 (47%), Positives = 97/150 (64%)
Query: 163 GTVFALRVSPAIANRIVDTAKGILLSYLPDVYLSVDHCXXXXXXXXXXXXXXIYAESSTG 222
G +++RVSP +ANRIVD+A+ IL ++PD+Y+ DH + AE+++G
Sbjct: 7 GCRYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTSG 66
Query: 223 VVLTADAVSPPP-PATRTVPETLGEQLAYNLLEEISRGGMVDSSFQSLGCLYMALHQKDV 281
L+A+ S P +PE LG A LLEEI RGG VDS+ QSL L M L Q+DV
Sbjct: 67 TFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQQDV 126
Query: 282 SQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 311
S++L+GPLSPYT++FLRHLK FF + FK+E
Sbjct: 127 SKVLLGPLSPYTIEFLRHLKSFFQIMFKIE 156
Score = 188 (71.2 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 44/85 (51%), Positives = 58/85 (68%)
Query: 312 HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLERESEI 371
+ G VDS+ QSL L M L Q+DVS++L+GPLSPYT++FLRHLK FF + FK+E +
Sbjct: 102 YRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYTIEFLRHLKSFFQIMFKIETK--- 158
Query: 372 NPEQEEDEKPLRCGQEKVQLTCVHI 396
P EE L+ G +KV +TCV I
Sbjct: 159 -PCGEE----LK-GGDKVLMTCVGI 177
>GENEDB_PFALCIPARUM|PF14_0677 [details] [associations]
symbol:PF14_0677 "RNA 3'-Terminal Phosphate
Cyclase-like protein, putative" species:5833 "Plasmodium
falciparum" [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000228
InterPro:IPR013792 GO:GO:0003824 GO:GO:0042254 GO:GO:0006396
EMBL:AE014187 SUPFAM:SSF55205 KO:K11108 Gene3D:3.65.10.20
InterPro:IPR023797 PANTHER:PTHR11096 Pfam:PF01137
RefSeq:XP_001348851.1 ProteinModelPortal:Q8I717
EnsemblProtists:PF14_0677:mRNA GeneID:812259 KEGG:pfa:PF14_0677
EuPathDB:PlasmoDB:PF3D7_1471000 HOGENOM:HOG000281878 OMA:NDENIVP
ProtClustDB:CLSZ2431805 Uniprot:Q8I717
Length = 467
Score = 265 (98.3 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 64/194 (32%), Positives = 106/194 (54%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHE----------CCKERGI 65
EYE +L+LIDKL + TT+++NE G L F+PG L+G + + C KER I
Sbjct: 66 EYEAKILKLIDKLCDNTTIKINEEGDELYFEPGYLIGNTNEEDSRNMYNMTFHCGKERSI 125
Query: 66 GYYLEVCLALAPFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELI-I 124
YYLE + + F K + I+++G+T++ D +V + K K+ L ++ I I
Sbjct: 126 TYYLEFLIMIVLFFKNPVNILLKGITDDYIDNNVYTCKIICEHFFKEILKLNEDFLYINI 185
Query: 125 KKRGMEPEGGGEIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKG 184
KR +PE GE++F IK I P ++G + +I G++ + +S N+I++ AK
Sbjct: 186 LKRSTKPECSGEVHFFMRNIKKINPFDITNVGVVNKISGSILSNNISLMFRNKIMNFAKK 245
Query: 185 ILLSYLPDVYLSVD 198
L + P Y+++D
Sbjct: 246 QLYHFTP--YINID 257
Score = 114 (45.2 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 242 ETLGEQLAYNLLEEISRGGMVDSSFQSLGCLYMALH-QKDVSQLLIGPLSPYTVQFLRHL 300
E LG ++ ++ +I VD+++Q L LYMAL VS++ + + PY++ +R L
Sbjct: 369 ERLGFFISLKMINQIKGLSSVDTNYQWLPLLYMALATDTSVSKITLSIIKPYSITLIRLL 428
Query: 301 KQFFGLKFKLEH-ESGMVDSSF--QSLGCLYMALHQK 334
+ FF + FK+E + + S+ Q +G Y + +K
Sbjct: 429 RDFFNVVFKIEKVQKSPIHYSYLIQCVGIGYQNIFKK 465
Score = 104 (41.7 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 292 YTVQFLRHLKQFFGLKFKLEHESGM--VDSSFQSLGCLYMALH-QKDVSQLLIGPLSPYT 348
+ V L F LK + G+ VD+++Q L LYMAL VS++ + + PY+
Sbjct: 363 HDVDIYERLGFFISLKM-INQIKGLSSVDTNYQWLPLLYMALATDTSVSKITLSIIKPYS 421
Query: 349 VQFLRHLKQFFGLKFKLER 367
+ +R L+ FF + FK+E+
Sbjct: 422 ITLIRLLRDFFNVVFKIEK 440
>UNIPROTKB|Q8I717 [details] [associations]
symbol:PF14_0677 "RNA 3'-Terminal Phosphate Cyclase-like
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0005575 "cellular_component" evidence=ND] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000228 InterPro:IPR013792
GO:GO:0003824 GO:GO:0042254 GO:GO:0006396 EMBL:AE014187
SUPFAM:SSF55205 KO:K11108 Gene3D:3.65.10.20 InterPro:IPR023797
PANTHER:PTHR11096 Pfam:PF01137 RefSeq:XP_001348851.1
ProteinModelPortal:Q8I717 EnsemblProtists:PF14_0677:mRNA
GeneID:812259 KEGG:pfa:PF14_0677 EuPathDB:PlasmoDB:PF3D7_1471000
HOGENOM:HOG000281878 OMA:NDENIVP ProtClustDB:CLSZ2431805
Uniprot:Q8I717
Length = 467
Score = 265 (98.3 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 64/194 (32%), Positives = 106/194 (54%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHE----------CCKERGI 65
EYE +L+LIDKL + TT+++NE G L F+PG L+G + + C KER I
Sbjct: 66 EYEAKILKLIDKLCDNTTIKINEEGDELYFEPGYLIGNTNEEDSRNMYNMTFHCGKERSI 125
Query: 66 GYYLEVCLALAPFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELI-I 124
YYLE + + F K + I+++G+T++ D +V + K K+ L ++ I I
Sbjct: 126 TYYLEFLIMIVLFFKNPVNILLKGITDDYIDNNVYTCKIICEHFFKEILKLNEDFLYINI 185
Query: 125 KKRGMEPEGGGEIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPAIANRIVDTAKG 184
KR +PE GE++F IK I P ++G + +I G++ + +S N+I++ AK
Sbjct: 186 LKRSTKPECSGEVHFFMRNIKKINPFDITNVGVVNKISGSILSNNISLMFRNKIMNFAKK 245
Query: 185 ILLSYLPDVYLSVD 198
L + P Y+++D
Sbjct: 246 QLYHFTP--YINID 257
Score = 114 (45.2 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 242 ETLGEQLAYNLLEEISRGGMVDSSFQSLGCLYMALH-QKDVSQLLIGPLSPYTVQFLRHL 300
E LG ++ ++ +I VD+++Q L LYMAL VS++ + + PY++ +R L
Sbjct: 369 ERLGFFISLKMINQIKGLSSVDTNYQWLPLLYMALATDTSVSKITLSIIKPYSITLIRLL 428
Query: 301 KQFFGLKFKLEH-ESGMVDSSF--QSLGCLYMALHQK 334
+ FF + FK+E + + S+ Q +G Y + +K
Sbjct: 429 RDFFNVVFKIEKVQKSPIHYSYLIQCVGIGYQNIFKK 465
Score = 104 (41.7 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 292 YTVQFLRHLKQFFGLKFKLEHESGM--VDSSFQSLGCLYMALH-QKDVSQLLIGPLSPYT 348
+ V L F LK + G+ VD+++Q L LYMAL VS++ + + PY+
Sbjct: 363 HDVDIYERLGFFISLKM-INQIKGLSSVDTNYQWLPLLYMALATDTSVSKITLSIIKPYS 421
Query: 349 VQFLRHLKQFFGLKFKLER 367
+ +R L+ FF + FK+E+
Sbjct: 422 ITLIRLLRDFFNVVFKIEK 440
>UNIPROTKB|Q5VYW8 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 GO:GO:0003824 GO:GO:0006396
SUPFAM:SSF55205 EMBL:AL353151 Gene3D:3.65.10.20 InterPro:IPR023797
PANTHER:PTHR11096 Pfam:PF01137 EMBL:AL158147 UniGene:Hs.194121
HGNC:HGNC:17687 ChiTaRS:RCL1 IPI:IPI00477560 SMR:Q5VYW8
Ensembl:ENST00000381732 HOGENOM:HOG000207652 Uniprot:Q5VYW8
Length = 175
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 50/84 (59%), Positives = 68/84 (80%)
Query: 16 EYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCLAL 75
++E + +RL+DK+TNG+ +E+N+TGTTL +QPG+L GG ++H+C RGIGYYLE L L
Sbjct: 46 DFEASFIRLLDKITNGSRIEINQTGTTLYYQPGLLYGGSVEHDCSVLRGIGYYLESLLCL 105
Query: 76 APFCKKGLQIVMRGVTNNQKDPSV 99
APF K L+IV+RGVTN+Q DPSV
Sbjct: 106 APFMKHPLKIVLRGVTNDQVDPSV 129
>UNIPROTKB|G4MZF3 [details] [associations]
symbol:MGG_04422 "18S rRNA biogenesis protein RCL1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR016443 PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 EMBL:CM001232 KO:K11108
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
RefSeq:XP_003713515.1 ProteinModelPortal:G4MZF3
EnsemblFungi:MGG_04422T0 GeneID:2677945 KEGG:mgr:MGG_04422
Uniprot:G4MZF3
Length = 399
Score = 222 (83.2 bits), Expect = 9.9e-25, Sum P(2) = 9.9e-25
Identities = 79/258 (30%), Positives = 127/258 (49%)
Query: 63 RGIGYYLEVCLALAPFCKKGLQIVMRG---VTNNQK--DPSVDSFKAGGLPVLKQFLVVD 117
RGI YYL LAPF K + I G +T + D SVDSF+ LP+ F +
Sbjct: 110 RGITYYLIPIAMLAPFSKAHVNICFSGPGVITAATELGDMSVDSFRLAILPLYGLFGIPP 169
Query: 118 PGIELIIKKRGM----EPEGGG--EIYFNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVS 171
I++++++R + GGG E+ F + ++ G+I+RI G ++ VS
Sbjct: 170 ARIDILVRQRSCAGYGDRRGGGVVELRFASQVRLPKTLHMNRTPGRIRRIGGVAYSTGVS 229
Query: 172 PAIANRIVDTAKGILLSYLPDVYL--SVDHCXXXXXXXXXXXXXXIYAESST-GVVLTAD 228
+ R++ A+G+L + ++ + + + AESS GVV +AD
Sbjct: 230 ASNNKRMIHAARGVLNALTGEIKIGEAPPGKDDAKNKIGIGFGLSLVAESSVPGVVYSAD 289
Query: 229 AVSPPPPATRTVPETLGEQLAYNLLEEISRGGMVD-SSFQSLGCLYMALHQKDVSQLLIG 287
VSP +PE LG Q A+ LLE I++GG V ++ +S+ L MA+ +DV +L IG
Sbjct: 290 VVSPARGGA--LPEDLGAQCAHQLLEAIAKGGCVSWAAARSVLTL-MAMGSEDVGRLRIG 346
Query: 288 P--LSPYTVQFLRHLKQF 303
+ T+ R L++F
Sbjct: 347 KDVVDEDTIGLARDLRKF 364
Score = 120 (47.3 bits), Expect = 9.9e-25, Sum P(2) = 9.9e-25
Identities = 28/86 (32%), Positives = 47/86 (54%)
Query: 17 YEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGL-----------IQHEC--CKER 63
+E++ LRL++ +TNG++++++ TGTT+ + PG++ G + I+ R
Sbjct: 51 HEISFLRLLETVTNGSSIQISYTGTTMTYHPGLITGSVPGAGAAVNGDSIEFSLPETNRR 110
Query: 64 GIGYYLEVCLALAPFCKKGLQIVMRG 89
GI YYL LAPF K + I G
Sbjct: 111 GITYYLIPIAMLAPFSKAHVNICFSG 136
>UNIPROTKB|Q5VZU2 [details] [associations]
symbol:RCL1 "RNA 3'-terminal phosphate cyclase-like
protein" species:9606 "Homo sapiens" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 GO:GO:0003824 GO:GO:0006396
SUPFAM:SSF55205 EMBL:AL353151 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
EMBL:AL158147 UniGene:Hs.194121 HGNC:HGNC:17687 ChiTaRS:RCL1
HOGENOM:HOG000110352 HOVERGEN:HBG054967 IPI:IPI00479685 SMR:Q5VZU2
Ensembl:ENST00000441844 Uniprot:Q5VZU2
Length = 138
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 60/132 (45%), Positives = 82/132 (62%)
Query: 163 GTVFALRVSPAIANRIVDTAKGILLSYLPDVYLSVDHCXXXXXXXXXXXXXXIYAESSTG 222
G +++RVSP +ANRIVD+A+ IL ++PD+Y+ DH + AE+++G
Sbjct: 7 GCRYSVRVSPQMANRIVDSARSILNKFIPDIYIYTDHMKGVNSGKSPGFGLSLVAETTSG 66
Query: 223 VVLTADAVSPPP-PATRTVPETLGEQLAYNLLEEISRGGMVDSSFQSLGCLYMALHQKDV 281
L+A+ S P +PE LG A LLEEI RGG VDS+ QSL L M L Q+DV
Sbjct: 67 TFLSAELASNPQGQGAAVLPEDLGRNCARLLLEEIYRGGCVDSTNQSLALLLMTLGQQDV 126
Query: 282 SQLLIGPLSPYT 293
S++L+GPLSPYT
Sbjct: 127 SKVLLGPLSPYT 138
Score = 109 (43.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 312 HESGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYT 348
+ G VDS+ QSL L M L Q+DVS++L+GPLSPYT
Sbjct: 102 YRGGCVDSTNQSLALLLMTLGQQDVSKVLLGPLSPYT 138
>ASPGD|ASPL0000041674 [details] [associations]
symbol:AN1474 species:162425 "Emericella nidulans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR016443
PIRSF:PIRSF005378 GO:GO:0003824 GO:GO:0005730 EMBL:BN001307
GO:GO:0042254 GO:GO:0006396 SUPFAM:SSF55205 EMBL:AACD01000022
eggNOG:COG0430 HOGENOM:HOG000157670 KO:K11108 OMA:FMKHPLR
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 TIGRFAMs:TIGR03400
RefSeq:XP_659078.1 STRING:Q5BDA6 EnsemblFungi:CADANIAT00008091
GeneID:2875217 KEGG:ani:AN1474.2 OrthoDB:EOG41ZJKD Uniprot:Q5BDA6
Length = 403
Score = 268 (99.4 bits), Expect = 7.9e-22, P = 7.9e-22
Identities = 83/267 (31%), Positives = 134/267 (50%)
Query: 48 GILVGGLIQHEC---CKERGIGYYL-EVCLALAPFCKKGLQIVMRG---VTNNQK--DPS 98
G G +I+HE C RG+ Y+L +CL LAPF K ++++ G +T++ D S
Sbjct: 90 GASSGSVIRHEIPAGCT-RGVSYFLIPLCL-LAPFSKAPIKVLFTGPGVITSSTPTGDMS 147
Query: 99 VDSFKAGGLPVLKQFLVVDPGIEL-IIKKRGMEPEG---GGEIY--FNCPIIKSIKPVQS 152
VDS + LP+ QF + + IEL ++++ + P G GGE+ F + + K +
Sbjct: 148 VDSVRTAILPLFNQFGIFN-NIELRVLRRSNLGPNGRGGGGEVQLVFGHQV-RLPKTLHL 205
Query: 153 KDMGKIKRIRGTVFALRVSPAIANRIVDTAKGILLSYLPDVYLSVDHCXX---------- 202
+ G+IKR+RG +++ VS + R++DT +G+L +PD Y+ D
Sbjct: 206 MNAGRIKRVRGVAYSVGVSASNNARMIDTCRGVLNPLVPDTYIFSDVSSAPLVPAPERNN 265
Query: 203 --XXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTVPETLGEQLAYNLLEEISRGG 260
+ AESSTG + +AD PP PE +G+Q AY LLE IS+GG
Sbjct: 266 PSAKKKIGLGFGLSLVAESSTGCLFSADVACPPSGGQP--PEDIGKQCAYQLLETISKGG 323
Query: 261 MVDSSFQSLGCLYMALHQKDVSQLLIG 287
V + + M + +DV ++ +G
Sbjct: 324 CVAPAAFPIMIGLMTMGSEDVGRIQVG 350
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 31/87 (35%), Positives = 55/87 (63%)
Query: 17 YEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVG----------GLIQHEC---CKER 63
+E++ LRL++ +TNG+ +E++ TGT +V++PG++ G +I+HE C R
Sbjct: 49 HEISFLRLLEAVTNGSQMEISYTGTIIVYKPGLITGTASGVGASSGSVIRHEIPAGCT-R 107
Query: 64 GIGYYL-EVCLALAPFCKKGLQIVMRG 89
G+ Y+L +CL LAPF K ++++ G
Sbjct: 108 GVSYFLIPLCL-LAPFSKAPIKVLFTG 133
>UNIPROTKB|E1C1Y0 [details] [associations]
symbol:RTCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003963 "RNA-3'-phosphate cyclase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 GO:GO:0005524 GO:GO:0006396
SUPFAM:SSF55205 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 KO:K01974 OMA:RRGHYPK
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399 CTD:295395
EMBL:AADN02012905 IPI:IPI00602093 RefSeq:XP_422311.1
UniGene:Gga.9061 PRIDE:E1C1Y0 Ensembl:ENSGALT00000008464
GeneID:424468 KEGG:gga:424468 NextBio:20826795 Uniprot:E1C1Y0
Length = 365
Score = 223 (83.6 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 76/304 (25%), Positives = 131/304 (43%)
Query: 22 LRLIDKLTNGTTLEVNETGTT-LVFQPGILVGGLIQHECCKERGIGYYLEVCLALAPFCK 80
L ++ L G LE E G+T + F PG + GG + + ++V + F
Sbjct: 56 LEIVRDLCEGN-LEGGEIGSTEITFTPGKIKGGTHIADTKTAGSVCLLMQVAMPCVLFAA 114
Query: 81 KGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGGEIYFN 140
++ +G TN + P +D P++++F IKKRG P+GGGE+
Sbjct: 115 SPSELHFKGGTNAEMAPQIDYTVMVFKPIVEKFNFT---FNCDIKKRGYYPQGGGEVIVR 171
Query: 141 CPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPA-IANRIVDTAKGILLSYLPDVYLSVDH 199
+K + P+ + G + +I G F P +A + A + + D+Y+++
Sbjct: 172 MSPVKELSPIDLTERGAVTKIYGRAFVAGALPIKLAKDMSAAAVRCIRKEIRDLYINIQT 231
Query: 200 CXX-XXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTVPETLGEQLAYNLLEEISR 258
I AE+STG +L ++ + + +G + A LL+ +
Sbjct: 232 VREPDDQAFGTGSGIIIVAETSTGCLLAGSSLGRRGKNS----DRVGIEAAEILLKNLKH 287
Query: 259 GGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKF---KLEHESG 315
GG VD S Q ++MAL K VS++ GP++ +T + +Q KF K E E
Sbjct: 288 GGAVDDSLQDQLIIFMAL-AKGVSRVKSGPVTLHTQTAIHFAEQLTKAKFTVTKSEEEDP 346
Query: 316 MVDS 319
D+
Sbjct: 347 SKDT 350
>RGD|1303111 [details] [associations]
symbol:Rtcd1 "RNA terminal phosphate cyclase domain 1"
species:10116 "Rattus norvegicus" [GO:0003963 "RNA-3'-phosphate
cyclase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006396
"RNA processing" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR017770 PIRSF:PIRSF005378 RGD:1303111
GO:GO:0005524 GO:GO:0006396 SUPFAM:SSF55205 EMBL:CH473952
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 HOGENOM:HOG000015264
HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK OrthoDB:EOG4DR9CM
Gene3D:3.30.360.20 InterPro:IPR013791 SUPFAM:SSF52913
TIGRFAMs:TIGR03399 EMBL:BC079374 IPI:IPI00201443
RefSeq:NP_001004227.1 UniGene:Rn.25445 STRING:Q68FS8
Ensembl:ENSRNOT00000020149 GeneID:295395 KEGG:rno:295395
UCSC:RGD:1303111 CTD:295395 InParanoid:Q68FS8 NextBio:639497
Genevestigator:Q68FS8 Uniprot:Q68FS8
Length = 366
Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 74/303 (24%), Positives = 129/303 (42%)
Query: 22 LRLIDKLTNGTTLEVNETGTT-LVFQPGILVGGLIQHECCKERGIGYYLEVCLALAPFCK 80
L ++ L +G LE E G+T + F P + GG+ + + ++V + F
Sbjct: 56 LEMVRDLCDGH-LEGAEIGSTEITFTPEKIRGGVHTADTKTAGSVCLLMQVSMPCVLFAA 114
Query: 81 KGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGGEIYFN 140
++ ++G TN + P +D P+ ++F IK RG P+GGGE+
Sbjct: 115 SPSELRLKGGTNAEMAPQIDYTMMVFKPIAEKFGFT---FNCDIKTRGYYPKGGGEVIVR 171
Query: 141 CPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPA-IANRIVDTAKGILLSYLPDVYLSVDH 199
+K + P+ D G + +I G F V P +A + A L + D+Y+S+
Sbjct: 172 MSPVKRLDPINLTDRGSVTKIYGRAFVAGVLPLKVAKDMAAAAVRCLRKEIRDLYVSIQP 231
Query: 200 CXXXXXXXXXXXXXXIY-AESSTGVVLTADAVSPPPPATRTV-PETLGEQLAYNLLEEIS 257
I AE+STG + ++ R V + +G + A LL +
Sbjct: 232 VQEARDQAFGNGSGIIIVAETSTGCLFAGSSLGK-----RGVNADKVGIEAAEMLLANLR 286
Query: 258 RGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLEHESGMV 317
GG VD Q ++MAL +S++ GP++ +T + +Q KF ++
Sbjct: 287 HGGTVDEYLQDQLIIFMAL-ASGISRIKTGPVTLHTQTAIHFAEQLAKAKFTVKKSEEEE 345
Query: 318 DSS 320
D+S
Sbjct: 346 DAS 348
>ZFIN|ZDB-GENE-030131-9687 [details] [associations]
symbol:rtca "RNA 3'-terminal phosphate cyclase"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 ZFIN:ZDB-GENE-030131-9687
GO:GO:0005524 GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
PROSITE:PS01287 GeneTree:ENSGT00530000063404 GO:GO:0003963 CTD:8634
HOGENOM:HOG000015264 HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM Gene3D:3.30.360.20 InterPro:IPR013791
SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:CR751228 EMBL:BC046087
EMBL:AY398409 IPI:IPI00501190 RefSeq:NP_955830.1 UniGene:Dr.104448
HSSP:P46849 STRING:Q7ZUX5 Ensembl:ENSDART00000021666 GeneID:321129
KEGG:dre:321129 InParanoid:Q7ZUX5 NextBio:20807244 Uniprot:Q7ZUX5
Length = 363
Score = 207 (77.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 69/291 (23%), Positives = 123/291 (42%)
Query: 22 LRLIDKLTNGTTLEVNETGTT-LVFQPGILVGGLIQHECCKERGIGYYLEVCLALAPFCK 80
L L+ + NG LE G++ + PG + GG + + ++V L A F +
Sbjct: 56 LELLRDMCNGN-LEGATVGSSEITLTPGKIKGGNHIADTHTAGSVTLLMQVSLPCALFAQ 114
Query: 81 KGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGGEIYFN 140
++ ++G TN + P +D P++++F V + ++ RG P+GGGE+
Sbjct: 115 GPSELCLKGGTNAEMAPQIDYTVKVFKPIVERFGVQ---FDCDLRMRGYYPKGGGEVVLK 171
Query: 141 CPIIKSIKPVQSKDMGKIKRIRGTVFALRVSP-AIANRIVDTAKGILLSYLPDVYLSVDH 199
K + P+ + G I +I G F V P +A + A + + D+Y+++
Sbjct: 172 VNPAKELSPINMTERGNITKIYGRAFVAGVLPFKLAKDMSTAAIRTIRKEIKDLYINIQS 231
Query: 200 CXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTVPETLGEQLAYNLLEEISRG 259
I AESSTG + ++ + +G + A LL I
Sbjct: 232 LQEKDKACGNGNGIIIIAESSTGCIFAGSSLGKKG----VYADKVGIEAAEMLLRNIRHN 287
Query: 260 GMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKL 310
G VD Q ++MAL S++ GP++ +T + +Q KF +
Sbjct: 288 GCVDEFLQDQLIIFMAL-ANGTSRMRTGPITLHTQTAIHVAEQLTNAKFAI 337
>UNIPROTKB|E2RQG6 [details] [associations]
symbol:RTCA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR017770
GO:GO:0006396 SUPFAM:SSF55205 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 Gene3D:3.30.360.20
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
EMBL:AAEX03004772 Ensembl:ENSCAFT00000031847 OMA:IRAGREN
Uniprot:E2RQG6
Length = 540
Score = 210 (79.0 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 74/305 (24%), Positives = 133/305 (43%)
Query: 22 LRLIDKLTNGTTLEVNETGTT-LVFQPGILVGGLIQHECCKERGIGYYLEVCLALAPFCK 80
L +I L +G LE E G+T ++F P + GG+ + + ++V + F
Sbjct: 230 LEMIRDLCDGQ-LEGAEIGSTEIIFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAA 288
Query: 81 KGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELI--IKKRGMEPEGGGEIY 138
++ ++G TN + P +D P++++F G + IK RG P+GGGE+
Sbjct: 289 SPSELRLKGGTNAEMAPQIDYTAMVFKPIVEKF-----GFQFNCDIKMRGYYPKGGGEVI 343
Query: 139 FNCPIIKSIKPVQSKDMGKIKRIRGTVFALRVSP-AIANRIVDTAKGILLSYLPDVYLSV 197
+K + P+ D G + +I G F V P +A + A + + D+Y+++
Sbjct: 344 VRMSPVKQLNPINLTDRGSVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNI 403
Query: 198 DHCXX-XXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTV-PETLGEQLAYNLLEE 255
I AE+STG + ++ R V + +G + A LL
Sbjct: 404 QPVQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGK-----RGVNADKVGIEAAEMLLAN 458
Query: 256 ISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLEHESG 315
+ GG VD Q ++MAL VS++ GP++ +T + +Q KF ++
Sbjct: 459 LRHGGAVDEYLQDQLIIFMAL-ACGVSRIKTGPVTLHTQTAIHFAEQLAKAKFSVKKSED 517
Query: 316 MVDSS 320
D++
Sbjct: 518 EEDAA 522
>UNIPROTKB|Q2HJ88 [details] [associations]
symbol:RTCA "RNA 3'-terminal phosphate cyclase"
species:9913 "Bos taurus" [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 GO:GO:0005524 GO:GO:0005654
GO:GO:0006396 SUPFAM:SSF55205 eggNOG:COG0430 Gene3D:3.65.10.20
InterPro:IPR023797 InterPro:IPR020719 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 EMBL:BC113251
IPI:IPI00705240 RefSeq:NP_001039520.1 UniGene:Bt.20917
ProteinModelPortal:Q2HJ88 STRING:Q2HJ88 Ensembl:ENSBTAT00000008293
GeneID:510469 KEGG:bta:510469 CTD:8634 HOGENOM:HOG000015264
HOVERGEN:HBG017761 InParanoid:Q2HJ88 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM NextBio:20869459 Gene3D:3.30.360.20
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
Uniprot:Q2HJ88
Length = 366
Score = 205 (77.2 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 73/303 (24%), Positives = 130/303 (42%)
Query: 22 LRLIDKLTNGTTLEVNETGTT-LVFQPGILVGGLIQHECCKERGIGYYLEVCLALAPFCK 80
L +I L +G LE E G+T + F P + GG+ + + ++V + F
Sbjct: 56 LEMIRDLCDGQ-LEGAEIGSTEITFTPEKIKGGVHTADTKTAGSVCLLMQVSMPCVLFAA 114
Query: 81 KGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGGEIYFN 140
++ ++G TN + P +D P++++F IK RG P+GGGE+
Sbjct: 115 CPSELRLKGGTNAEMAPQIDYTAMVFKPIVEKFGFT---FNCDIKMRGYYPKGGGEVIVR 171
Query: 141 CPIIKSIKPVQSKDMGKIKRIRGTVFALRVSP-AIANRIVDTAKGILLSYLPDVYLSVDH 199
+K + P+ D G + +I G F V P +A + A + + D+Y+++
Sbjct: 172 MSPVKQLSPINLTDRGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQP 231
Query: 200 CXX-XXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTV-PETLGEQLAYNLLEEIS 257
I AE+STG + ++ R V + +G + A LL +
Sbjct: 232 VQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGK-----RGVNADKVGIEAAEMLLANLR 286
Query: 258 RGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLEHESGMV 317
GG VD Q ++MAL +S++ GP++ +T + +Q KF ++
Sbjct: 287 HGGAVDEYLQDQLIIFMAL-ASGISRIKTGPVTLHTQTAIHFAEQLAKAKFTVKKSEDEE 345
Query: 318 DSS 320
D+S
Sbjct: 346 DAS 348
>UNIPROTKB|O00442 [details] [associations]
symbol:RTCA "RNA 3'-terminal phosphate cyclase"
species:9606 "Homo sapiens" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003963
"RNA-3'-phosphate cyclase activity" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR017770 GO:GO:0005524 GO:GO:0005654
GO:GO:0003723 EMBL:CH471097 GO:GO:0006396 SUPFAM:SSF55205
EMBL:AL445928 eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287 GO:GO:0003963 CTD:8634
HOGENOM:HOG000015264 HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM Gene3D:3.30.360.20 InterPro:IPR013791
SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:Y11651 EMBL:Y11652
EMBL:AL663111 EMBL:BC012604 IPI:IPI00011726 IPI:IPI00221327
PIR:T48844 RefSeq:NP_001124313.1 RefSeq:NP_003720.1
UniGene:Hs.484222 ProteinModelPortal:O00442 SMR:O00442
IntAct:O00442 STRING:O00442 PhosphoSite:O00442 PaxDb:O00442
PRIDE:O00442 DNASU:8634 Ensembl:ENST00000260563
Ensembl:ENST00000370128 GeneID:8634 KEGG:hsa:8634 UCSC:uc001dtc.3
UCSC:uc001dtd.3 GeneCards:GC01P100732 HGNC:HGNC:17981 HPA:HPA027982
HPA:HPA028151 MIM:611286 neXtProt:NX_O00442 PharmGKB:PA34877
ChiTaRS:RTCA GenomeRNAi:8634 NextBio:32367 PMAP-CutDB:O00442
ArrayExpress:O00442 Bgee:O00442 CleanEx:HS_RTCD1
Genevestigator:O00442 Uniprot:O00442
Length = 366
Score = 202 (76.2 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 72/303 (23%), Positives = 131/303 (43%)
Query: 22 LRLIDKLTNGTTLEVNETGTT-LVFQPGILVGGLIQHECCKERGIGYYLEVCLALAPFCK 80
L +I L +G LE E G+T + F P + GG+ + + ++V + F
Sbjct: 56 LEMIRDLCDGQ-LEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAA 114
Query: 81 KGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGGEIYFN 140
++ ++G TN + P +D P++++F + IK RG P+GGGE+
Sbjct: 115 SPSELHLKGGTNAEMAPQIDYTVMVFKPIVEKFGFI---FNCDIKTRGYYPKGGGEVIVR 171
Query: 141 CPIIKSIKPVQSKDMGKIKRIRGTVFALRVSP-AIANRIVDTAKGILLSYLPDVYLSVDH 199
+K + P+ + G + +I G F V P +A + A + + D+Y+++
Sbjct: 172 MSPVKQLNPINLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQP 231
Query: 200 CXX-XXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTV-PETLGEQLAYNLLEEIS 257
I AE+STG + ++ R V + +G + A LL +
Sbjct: 232 VQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGK-----RGVNADKVGIEAAEMLLANLR 286
Query: 258 RGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLEHESGMV 317
GG VD Q ++MAL VS++ GP++ +T + +Q KF ++
Sbjct: 287 HGGTVDEYLQDQLIVFMAL-ANGVSRIKTGPVTLHTQTAIHFAEQIAKAKFIVKKSEDEE 345
Query: 318 DSS 320
D++
Sbjct: 346 DAA 348
>MGI|MGI:1913618 [details] [associations]
symbol:Rtca "RNA 3'-terminal phosphate cyclase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003963
"RNA-3'-phosphate cyclase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 PIRSF:PIRSF005378 MGI:MGI:1913618 GO:GO:0005524
GO:GO:0005654 GO:GO:0006396 EMBL:CH466532 SUPFAM:SSF55205
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287
GeneTree:ENSGT00530000063404 GO:GO:0003963 CTD:8634
HOGENOM:HOG000015264 HOVERGEN:HBG017761 KO:K01974 OMA:RRGHYPK
OrthoDB:EOG4DR9CM Gene3D:3.30.360.20 InterPro:IPR013791
SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:AK009245 EMBL:AK152129
EMBL:AK159961 IPI:IPI00110315 RefSeq:NP_079793.2 UniGene:Mm.251228
ProteinModelPortal:Q9D7H3 SMR:Q9D7H3 STRING:Q9D7H3
PhosphoSite:Q9D7H3 REPRODUCTION-2DPAGE:Q9D7H3 PaxDb:Q9D7H3
PRIDE:Q9D7H3 Ensembl:ENSMUST00000000348 GeneID:66368 KEGG:mmu:66368
InParanoid:Q3TVV2 NextBio:321465 PMAP-CutDB:Q9D7H3 Bgee:Q9D7H3
CleanEx:MM_RTCD1 Genevestigator:Q9D7H3
GermOnline:ENSMUSG00000000339 Uniprot:Q9D7H3
Length = 366
Score = 196 (74.1 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 75/306 (24%), Positives = 128/306 (41%)
Query: 22 LRLIDKLTNGTTLEVNETGTT-LVFQPGILVGGLIQHECCKERGIGYYLEVCLALAPFCK 80
L ++ L G LE E G+T + F P + GG+ + + ++V + F
Sbjct: 56 LEMVRDLCGGH-LEGAEIGSTEITFTPEKIRGGVHTADTKTAGSVCLLMQVSMPCVLFAA 114
Query: 81 KGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGGEIYFN 140
++ ++G TN + P +D P+ ++F IK RG P+GGGE+
Sbjct: 115 SPSELRLKGGTNAEMAPQIDYTMMVFKPIAEKFGFT---FNCDIKTRGYYPKGGGEVIVR 171
Query: 141 CPIIKSIKPVQSKDMGKIKRIRGTVFALRVSPA-IANRIVDTAKGILLSYLPDVYLSVDH 199
+K + P+ D G + +I G F V P +A + A + + D+Y+S+
Sbjct: 172 VSPVKRLDPINLTDRGSVTKIYGRAFVAGVLPLKVAKDMAAAAVRCIRKEIRDLYVSIQP 231
Query: 200 CXXXXXXXXXXXXXXIY-AESSTGVVLTADAVSPPPPATRTV-PETLGEQLAYNLLEEIS 257
I AE+STG + ++ R V + +G + A LL +
Sbjct: 232 VQEARDQAFGNGSGIIIVAETSTGCLFAGSSLGK-----RGVNADKVGIEAAEMLLANLR 286
Query: 258 RGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYT---VQFLRHL-KQFFGLKFKLEHE 313
GG VD Q ++MAL +S++ G ++ +T + F L K F +K E E
Sbjct: 287 HGGTVDEYLQDQLIIFMAL-ANGISRIKTGSVTLHTQTAIHFAEQLAKAKFTVKKSEEEE 345
Query: 314 SGMVDS 319
D+
Sbjct: 346 DATKDT 351
>DICTYBASE|DDB_G0276159 [details] [associations]
symbol:rtc1 "RNA 3'-terminal phosphate cyclase"
species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003963 "RNA-3'-phosphate cyclase
activity" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] InterPro:IPR000228
InterPro:IPR013792 InterPro:IPR017770 dictyBase:DDB_G0276159
GO:GO:0005524 GO:GO:0005654 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0006396 SUPFAM:SSF55205
eggNOG:COG0430 Gene3D:3.65.10.20 InterPro:IPR023797
InterPro:IPR020719 InterPro:IPR013796 PANTHER:PTHR11096
Pfam:PF01137 Pfam:PF05189 PROSITE:PS01287 GO:GO:0003963 KO:K01974
OMA:RRGHYPK Gene3D:3.30.360.20 InterPro:IPR013791
TIGRFAMs:TIGR03399 EMBL:AF020279 RefSeq:XP_643263.1
ProteinModelPortal:O15746 STRING:O15746 EnsemblProtists:DDB0185053
GeneID:8620306 KEGG:ddi:DDB_G0276159 ProtClustDB:CLSZ2430913
Uniprot:O15746
Length = 433
Score = 178 (67.7 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 71/286 (24%), Positives = 123/286 (43%)
Query: 14 QHEYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPG---ILVGGLIQHECCKERGIGYYLE 70
QH+ ++L+ + K + T V L +QP I G+I+ + I ++
Sbjct: 81 QHKAGIDLMSRLFK-AHLTGCSVGSC--KLYYQPTQKTIQDDGVIEADTKTAGSICLMIQ 137
Query: 71 VCLALAPFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGME 130
V L F ++V+ G TN P+ D + LP+ + E+ I KRG
Sbjct: 138 VSLPCLIFAPHSTKMVLGGGTNCDFAPAADYIQNVFLPIAT---TMGFKCEMSIDKRGFY 194
Query: 131 PEGGGEIYFNC-PIIKSIKPVQSKDMGKIKRI--RGTVFALRVSPAIANRIVDTAKGILL 187
P+GGG + P+ + + P+ + G++ RI + + R+SP +A R+ +TAK ++
Sbjct: 195 PKGGGAVTLTTQPLTQPLSPITIVNKGEVNRIVIKSYFTSPRISPLVAERMNNTAKKLIK 254
Query: 188 SYLPDVYLSVDHCXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTVPETLGEQ 247
V + + I A + G + A A E + E
Sbjct: 255 KDFKKVDVETELIDVSKFSFGDGTFIEIRAYTDQGCIFGATGNG----AIGVPAEKVAED 310
Query: 248 LAYNLLEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYT 293
A +LL+++ GG +D Q ++MAL K SQ+ GP+S +T
Sbjct: 311 AANSLLKDLQDGGCMDEYLQDQLIIFMAL-AKGKSQIKTGPISLHT 355
>UNIPROTKB|F1S564 [details] [associations]
symbol:RTCA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=IEA]
InterPro:IPR000228 InterPro:IPR013792 InterPro:IPR017770
PIRSF:PIRSF005378 GO:GO:0005524 GO:GO:0006396 SUPFAM:SSF55205
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR020719
InterPro:IPR013796 PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
PROSITE:PS01287 GeneTree:ENSGT00530000063404 GO:GO:0003963
OMA:RRGHYPK InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399
EMBL:CU466517 Ensembl:ENSSSCT00000007518 Uniprot:F1S564
Length = 365
Score = 167 (63.8 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 63/301 (20%), Positives = 123/301 (40%)
Query: 22 LRLIDKLTNGTTLEVNETGTT-LVFQPGILVGGLIQHECCKERGIGYYLEVCLALAPFCK 80
L ++ L +G LE E G+T ++F P + GG + + ++V + F
Sbjct: 56 LEMVRDLCDGQ-LEGAEIGSTEIMFTPEKIKGGTHTADTKTAGSVCLLMQVSMPCVLFAA 114
Query: 81 KGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEGGGEIYFN 140
++ ++G TN + P +D P++++F IK RG P+GGGE+
Sbjct: 115 SPSELRLKGGTNAEMAPQIDYTAMVFKPIVEKFGFT---FNCDIKMRGYYPKGGGEVIVR 171
Query: 141 CPIIKSIKPVQSKDMGKIKRIRGTVFALRVSP-AIANRIVDTAKGILLSYLPDVYLSVDH 199
+K + P+ D G + + G F + P +A ++ + + +++
Sbjct: 172 MSPVKQLNPINLTDRGSVIKSHGHSFCSGIMPFKVAYQMDAGSIRCCRENIKEMFCKFSP 231
Query: 200 CXXXXXXXXXXXXXXIYAESSTGVVLTADAVSPPPPATRTVPETLGEQLAYNLLEEISRG 259
I ST +L++ ++ + +G + A LL + G
Sbjct: 232 VQQVHDFLFCDSNGIIQTSQSTSGLLSSSSLGE----IGVNADKVGIEAAEVLLANLRHG 287
Query: 260 GMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLEHESGMVDS 319
G VD Q ++MAL +S++ GP++ +T + +Q KF ++ D+
Sbjct: 288 GAVDEYLQDQLIIFMAL-ASGISRIKTGPVTLHTQTAIHFAEQLAKAKFTVKKSEDEEDA 346
Query: 320 S 320
S
Sbjct: 347 S 347
>FB|FBgn0025630 [details] [associations]
symbol:CG4061 species:7227 "Drosophila melanogaster"
[GO:0003963 "RNA-3'-phosphate cyclase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006396 "RNA processing"
evidence=IEA] InterPro:IPR000228 InterPro:IPR013792
InterPro:IPR017770 GO:GO:0005524 GO:GO:0005654 EMBL:AE014298
GO:GO:0006396 EMBL:AL031765 SUPFAM:SSF55205 eggNOG:COG0430
Gene3D:3.65.10.20 InterPro:IPR023797 InterPro:IPR013796
PANTHER:PTHR11096 Pfam:PF01137 Pfam:PF05189
GeneTree:ENSGT00530000063404 GO:GO:0003963 KO:K01974 OMA:RRGHYPK
InterPro:IPR013791 SUPFAM:SSF52913 TIGRFAMs:TIGR03399 EMBL:AY052112
PIR:T13745 RefSeq:NP_569977.1 UniGene:Dm.33463
ProteinModelPortal:O77264 SMR:O77264 DIP:DIP-23093N
MINT:MINT-990359 STRING:O77264 PRIDE:O77264
EnsemblMetazoa:FBtr0070330 GeneID:31175 KEGG:dme:Dmel_CG4061
UCSC:CG4061-RA FlyBase:FBgn0025630 InParanoid:O77264
OrthoDB:EOG4R4XJ8 PhylomeDB:O77264 GenomeRNAi:31175 NextBio:772313
Bgee:O77264 GermOnline:CG4061 Uniprot:O77264
Length = 361
Score = 147 (56.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 70/304 (23%), Positives = 123/304 (40%)
Query: 14 QHEYEVNLLRLIDKLTNGTTLEVNETGTTLVFQPGILVGGLIQHECCKERGIGYYLEVCL 73
QH + +NLLR +TN + +T+ F P ++ + E I ++ L
Sbjct: 52 QHLHGLNLLR---DITNADVVGNYLLSSTVEFTPRTILDNTYRVETHTAASITLIYQMAL 108
Query: 74 ALAPFCKKGLQIVMRGVTNNQKDPSVDSFKAGGLPVLKQFLVVDPGIELIIKKRGMEPEG 133
+ F + ++++ G TN P V+ + LP LK F V +L +++ G P G
Sbjct: 109 PVLLFAGRPSRLIVSGGTNVDFAPPVEYMQEVLLPNLKHFGV---SFDLKVQRYGFYPRG 165
Query: 134 GGEIYFNCPIIKSIKPVQSKDMGKIKRIRGTVF-ALRVSPAIANRIVDTAKGILLSYLPD 192
G + + + + G+IK + G + A R+ IA + TA+ + P
Sbjct: 166 QGRCQLDVQPVTKLNSGKLVAFGRIKSVSGVAYCAGRLPVNIAIDMQQTAQREIHRLWPS 225
Query: 193 VYLSVDHCXXXXXXXXXXXXXXIYAESSTG-VVLTADAVSPPPPATRTVPETLGEQLAYN 251
S++ + ++T VVL A A+ R LG + +
Sbjct: 226 QQCSIEPIKHSRQKAFHNGAGILMTVNTTSDVVLGASALGKK----RIDGHVLGSEASCQ 281
Query: 252 LLEEISRGGMVDSSFQSLGCLYMALHQKDVSQLLIGPLSPYTVQFLRHLKQFFGLKFKLE 311
L + + + VD Q +YMAL S + G L+ +T + +Q G+KF +
Sbjct: 282 LGDYMRKQVCVDDYMQDQLIIYMAL-AVGRSTMRTGKLTNHTRTAINVAEQMTGVKFDVA 340
Query: 312 HESG 315
E G
Sbjct: 341 MEPG 344
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.140 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 401 387 0.00093 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 605 (64 KB)
Total size of DFA: 230 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.28u 0.08s 31.36t Elapsed: 00:00:14
Total cpu time: 31.29u 0.08s 31.37t Elapsed: 00:00:16
Start: Thu Aug 15 13:38:52 2013 End: Thu Aug 15 13:39:08 2013